locus-tag class description CHR53_00005 PF11638 DnaA N-terminal domain CHR53_00005 PF08299 Bacterial dnaA protein helix-turn-helix CHR53_00005 PF00308 Bacterial dnaA protein CHR53_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CHR53_00010 PF02767 DNA polymerase III beta subunit, central domain CHR53_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CHR53_00020 PF02463 RecF/RecN/SMC N terminal domain CHR53_00025 PF04025 Domain of unknown function (DUF370) CHR53_00030 PF00986 DNA gyrase B subunit, carboxyl terminus CHR53_00030 PF00204 DNA gyrase B CHR53_00030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_00030 PF01751 Toprim domain CHR53_00035 PF03989 DNA gyrase C-terminal domain, beta-propeller CHR53_00035 PF00521 DNA gyrase/topoisomerase IV, subunit A CHR53_00070 PF14175 YaaC-like Protein CHR53_00075 PF00478 IMP dehydrogenase / GMP reductase domain CHR53_00075 PF00571 CBS domain CHR53_00080 PF00768 D-alanyl-D-alanine carboxypeptidase CHR53_00080 PF07943 Penicillin-binding protein 5, C-terminal domain CHR53_00085 PF01680 SOR/SNZ family CHR53_00090 PF01174 SNO glutamine amidotransferase family CHR53_00095 PF02403 Seryl-tRNA synthetase N-terminal domain CHR53_00095 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHR53_00105 PF01712 Deoxynucleoside kinase CHR53_00110 PF01712 Deoxynucleoside kinase CHR53_00115 PF01476 LysM domain CHR53_00115 PF00704 Glycosyl hydrolases family 18 CHR53_00120 PF00857 Isochorismatase family CHR53_00125 PF14437 MafB19-like deaminase CHR53_00135 PF12169 DNA polymerase III subunits gamma and tau domain III CHR53_00140 PF02575 YbaB/EbfC DNA-binding family CHR53_00145 PF13662 Toprim domain CHR53_00145 PF02132 RecR protein CHR53_00150 PF10704 Protein of unknown function (DUF2508) CHR53_00155 PF07441 SigmaK-factor processing regulatory protein BofA CHR53_00185 PF10764 Inhibitor of sigma-G Gin CHR53_00190 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CHR53_00190 PF01276 Orn/Lys/Arg decarboxylase, major domain CHR53_00195 PF02223 Thymidylate kinase CHR53_00200 PF06153 Cyclic-di-AMP receptor CHR53_00205 PF09115 DNA polymerase III, delta subunit, C terminal CHR53_00210 PF04468 PSP1 C-terminal conserved region CHR53_00215 PF06156 Initiation control protein YabA CHR53_00220 PF05175 Methyltransferase small domain CHR53_00225 PF01541 GIY-YIG catalytic domain CHR53_00230 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHR53_00235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CHR53_00235 PF18277 AbrB C-terminal domain CHR53_00240 PF08264 Anticodon-binding domain of tRNA CHR53_00240 PF09334 tRNA synthetases class I (M) CHR53_00240 PF01588 Putative tRNA binding domain CHR53_00245 PF01026 TatD related DNase CHR53_00250 PF03990 G5-linked-Ubiquitin-like domain CHR53_00250 PF06725 3D domain CHR53_00250 PF07501 G5 domain CHR53_00255 PF13331 Domain of unknown function (DUF4093) CHR53_00255 PF13662 Toprim domain CHR53_00260 PF00398 Ribosomal RNA adenine dimethylase CHR53_00265 PF05582 YabG peptidase U57 CHR53_00270 PF06257 Biofilm formation stimulator VEG CHR53_00275 PF00269 Small, acid-soluble spore proteins, alpha/beta type CHR53_00280 PF08544 GHMP kinases C terminal CHR53_00280 PF00288 GHMP kinases N terminal domain CHR53_00285 PF00156 Phosphoribosyl transferase domain CHR53_00285 PF09182 Bacterial purine repressor, N-terminal CHR53_00290 PF01042 Endoribonuclease L-PSP CHR53_00295 PF04026 SpoVG CHR53_00300 PF00132 Bacterial transferase hexapeptide (six repeats) CHR53_00300 PF00483 Nucleotidyl transferase CHR53_00305 PF14572 Phosphoribosyl synthetase-associated domain CHR53_00305 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CHR53_00310 PF14693 Ribosomal protein TL5, C-terminal domain CHR53_00310 PF01386 Ribosomal L25p family CHR53_00315 PF01195 Peptidyl-tRNA hydrolase CHR53_00320 PF10955 Protein of unknown function (DUF2757) CHR53_00325 PF02559 CarD-like/TRCF domain CHR53_00325 PF00270 DEAD/DEAH box helicase CHR53_00325 PF00271 Helicase conserved C-terminal domain CHR53_00325 PF03461 TRCF domain CHR53_00325 PF17757 UvrB interaction domain CHR53_00330 PF15714 Stage V sporulation protein T C-terminal, transcription factor CHR53_00330 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CHR53_00335 PF14667 Polysaccharide biosynthesis C-terminal domain CHR53_00335 PF01943 Polysaccharide biosynthesis protein CHR53_00340 PF03819 MazG nucleotide pyrophosphohydrolase domain CHR53_00340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHR53_00345 PF01479 S4 domain CHR53_00350 PF07873 YabP family CHR53_00355 PF09578 Spore cortex protein YabQ (Spore_YabQ) CHR53_00365 PF00575 S1 RNA binding domain CHR53_00370 PF07228 Stage II sporulation protein E (SpoIIE) CHR53_00375 PF00092 von Willebrand factor type A domain CHR53_00380 PF00069 Protein kinase domain CHR53_00385 PF11734 TilS substrate C-terminal domain CHR53_00385 PF01171 PP-loop family CHR53_00385 PF09179 TilS substrate binding domain CHR53_00395 PF01434 Peptidase family M41 CHR53_00395 PF06480 FtsH Extracellular CHR53_00395 PF17862 AAA+ lid domain CHR53_00395 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_00400 PF03309 Type III pantothenate kinase CHR53_00405 PF01430 Hsp33 protein CHR53_00410 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_00415 PF00809 Pterin binding enzyme CHR53_00420 PF02152 Dihydroneopterin aldolase CHR53_00425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CHR53_00430 PF01381 Helix-turn-helix CHR53_00435 PF01207 Dihydrouridine synthase (Dus) CHR53_00440 PF00152 tRNA synthetases class II (D, K and N) CHR53_00440 PF01336 OB-fold nucleic acid binding domain CHR53_00525 PF05848 CtsR N-terminal HTH domain CHR53_00525 PF17727 CtsR C-terminal dimerization domain CHR53_00530 PF02151 UvrB/uvrC motif CHR53_00535 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CHR53_00540 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_00540 PF07724 AAA domain (Cdc48 subfamily) CHR53_00540 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_00540 PF17871 AAA lid domain CHR53_00540 PF02861 Clp amino terminal domain, pathogenicity island component CHR53_00545 PF18073 Rubredoxin metal binding domain CHR53_00560 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CHR53_00565 PF02542 YgbB family CHR53_00570 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHR53_00575 PF00132 Bacterial transferase hexapeptide (six repeats) CHR53_00580 PF09190 DALR domain CHR53_00580 PF01406 tRNA synthetases class I (C) catalytic domain CHR53_00585 PF00636 Ribonuclease III domain CHR53_00590 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHR53_00590 PF00588 SpoU rRNA Methylase family CHR53_00595 PF05991 YacP-like NYN domain CHR53_00600 PF04542 Sigma-70 region 2 CHR53_00600 PF08281 Sigma-70, region 4 CHR53_00605 PF00471 Ribosomal protein L33 CHR53_00610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CHR53_00615 PF00467 KOW motif CHR53_00615 PF02357 Transcription termination factor nusG CHR53_00625 PF00687 Ribosomal protein L1p/L10e family CHR53_00630 PF00466 Ribosomal protein L10 CHR53_00635 PF16320 Ribosomal protein L7/L12 dimerisation domain CHR53_00635 PF00542 Ribosomal protein L7/L12 C-terminal domain CHR53_00640 PF05175 Methyltransferase small domain CHR53_00645 PF10385 RNA polymerase beta subunit external 1 domain CHR53_00645 PF04563 RNA polymerase beta subunit CHR53_00645 PF04560 RNA polymerase Rpb2, domain 7 CHR53_00645 PF04565 RNA polymerase Rpb2, domain 3 CHR53_00645 PF04561 RNA polymerase Rpb2, domain 2 CHR53_00645 PF00562 RNA polymerase Rpb2, domain 6 CHR53_00650 PF04997 RNA polymerase Rpb1, domain 1 CHR53_00650 PF00623 RNA polymerase Rpb1, domain 2 CHR53_00650 PF05000 RNA polymerase Rpb1, domain 4 CHR53_00650 PF04998 RNA polymerase Rpb1, domain 5 CHR53_00650 PF04983 RNA polymerase Rpb1, domain 3 CHR53_00655 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CHR53_00660 PF00164 Ribosomal protein S12/S23 CHR53_00665 PF00177 Ribosomal protein S7p/S5e CHR53_00670 PF03144 Elongation factor Tu domain 2 CHR53_00670 PF00009 Elongation factor Tu GTP binding domain CHR53_00670 PF03764 Elongation factor G, domain IV CHR53_00670 PF14492 Elongation Factor G, domain II CHR53_00670 PF00679 Elongation factor G C-terminus CHR53_00675 PF00009 Elongation factor Tu GTP binding domain CHR53_00675 PF03143 Elongation factor Tu C-terminal domain CHR53_00675 PF03144 Elongation factor Tu domain 2 CHR53_00680 PF00338 Ribosomal protein S10p/S20e CHR53_00685 PF00297 Ribosomal protein L3 CHR53_00690 PF00573 Ribosomal protein L4/L1 family CHR53_00695 PF00276 Ribosomal protein L23 CHR53_00700 PF00181 Ribosomal Proteins L2, RNA binding domain CHR53_00700 PF03947 Ribosomal Proteins L2, C-terminal domain CHR53_00705 PF00203 Ribosomal protein S19 CHR53_00710 PF00237 Ribosomal protein L22p/L17e CHR53_00715 PF00189 Ribosomal protein S3, C-terminal domain CHR53_00715 PF07650 KH domain CHR53_00720 PF00252 Ribosomal protein L16p/L10e CHR53_00725 PF00831 Ribosomal L29 protein CHR53_00730 PF00366 Ribosomal protein S17 CHR53_00735 PF00238 Ribosomal protein L14p/L23e CHR53_00740 PF00467 KOW motif CHR53_00740 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CHR53_00745 PF00673 ribosomal L5P family C-terminus CHR53_00745 PF00281 Ribosomal protein L5 CHR53_00750 PF00253 Ribosomal protein S14p/S29e CHR53_00755 PF00410 Ribosomal protein S8 CHR53_00760 PF00347 Ribosomal protein L6 CHR53_00765 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CHR53_00770 PF03719 Ribosomal protein S5, C-terminal domain CHR53_00770 PF00333 Ribosomal protein S5, N-terminal domain CHR53_00775 PF00327 Ribosomal protein L30p/L7e CHR53_00780 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CHR53_00785 PF00344 SecY translocase CHR53_00790 PF05191 Adenylate kinase, active site lid CHR53_00795 PF01176 Translation initiation factor 1A / IF-1 CHR53_00800 PF00444 Ribosomal protein L36 CHR53_00805 PF00416 Ribosomal protein S13/S18 CHR53_00810 PF00411 Ribosomal protein S11 CHR53_00815 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CHR53_00815 PF01000 RNA polymerase Rpb3/RpoA insert domain CHR53_00815 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CHR53_00820 PF01196 Ribosomal protein L17 CHR53_00825 PF00005 ABC transporter CHR53_00830 PF00005 ABC transporter CHR53_00835 PF02361 Cobalt transport protein CHR53_00840 PF01416 tRNA pseudouridine synthase CHR53_00845 PF00572 Ribosomal protein L13 CHR53_00850 PF00380 Ribosomal protein S9/S16 CHR53_00880 PF11553 Protein of unknown function (DUF3231) CHR53_00895 PF00072 Response regulator receiver domain CHR53_00895 PF00196 Bacterial regulatory proteins, luxR family CHR53_00900 PF13185 GAF domain CHR53_00900 PF07730 Histidine kinase CHR53_00910 PF02547 Queuosine biosynthesis protein CHR53_00915 PF00106 short chain dehydrogenase CHR53_00920 PF00356 Bacterial regulatory proteins, lacI family CHR53_00925 PF00294 pfkB family carbohydrate kinase CHR53_00930 PF01156 Inosine-uridine preferring nucleoside hydrolase CHR53_00935 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_00940 PF03845 Spore germination protein CHR53_00950 PF02796 Helix-turn-helix domain of resolvase CHR53_00950 PF00239 Resolvase, N terminal domain CHR53_00955 PF13700 Domain of unknown function (DUF4158) CHR53_00955 PF01526 Tn3 transposase DDE domain CHR53_00965 PF07690 Major Facilitator Superfamily CHR53_00970 PF01177 Asp/Glu/Hydantoin racemase CHR53_00975 PF01177 Asp/Glu/Hydantoin racemase CHR53_00980 PF00557 Metallopeptidase family M24 CHR53_00980 PF01321 Creatinase/Prolidase N-terminal domain CHR53_00995 PF01968 Hydantoinase/oxoprolinase CHR53_00995 PF05378 Hydantoinase/oxoprolinase N-terminal region CHR53_01000 PF01381 Helix-turn-helix CHR53_01005 PF01619 Proline dehydrogenase CHR53_01015 PF00171 Aldehyde dehydrogenase family CHR53_01020 PF02954 Bacterial regulatory protein, Fis family CHR53_01020 PF13426 PAS domain CHR53_01020 PF00158 Sigma-54 interaction domain CHR53_01030 PF03606 C4-dicarboxylate anaerobic carrier CHR53_01040 PF01520 N-acetylmuramoyl-L-alanine amidase CHR53_01045 PF10609 NUBPL iron-transfer P-loop NTPase CHR53_01050 PF17898 Spore germination GerD central core domain CHR53_01055 PF14089 KinB-signalling pathway activation in sporulation CHR53_01060 PF01522 Polysaccharide deacetylase CHR53_01130 PF07977 FabA-like domain CHR53_01135 PF12116 Stage III sporulation protein D CHR53_01145 PF00491 Arginase family CHR53_01150 PF08281 Sigma-70, region 4 CHR53_01150 PF04542 Sigma-70 region 2 CHR53_01155 PF13490 Putative zinc-finger CHR53_01160 PF02457 DisA bacterial checkpoint controller nucleotide-binding CHR53_01165 PF07949 YbbR-like protein CHR53_01170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHR53_01170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHR53_01170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHR53_01170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHR53_01175 PF01380 SIS domain CHR53_01180 PF04341 Protein of unknown function, DUF485 CHR53_01185 PF00474 Sodium:solute symporter family CHR53_01190 PF00563 EAL domain CHR53_01190 PF00990 Diguanylate cyclase, GGDEF domain CHR53_01190 PF03707 Bacterial signalling protein N terminal repeat CHR53_01195 PF07681 DoxX CHR53_01200 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_01215 PF17936 Bacterial Ig domain CHR53_01215 PF00082 Subtilase family CHR53_01220 PF07969 Amidohydrolase family CHR53_01225 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHR53_01225 PF02378 Phosphotransferase system, EIIC CHR53_01225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHR53_01230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CHR53_01230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CHR53_01230 PF08279 HTH domain CHR53_01230 PF05043 Mga helix-turn-helix domain CHR53_01230 PF00874 PRD domain CHR53_01235 PF08125 Mannitol dehydrogenase C-terminal domain CHR53_01235 PF01232 Mannitol dehydrogenase Rossmann domain CHR53_01240 PF02073 Thermophilic metalloprotease (M29) CHR53_01255 PF00155 Aminotransferase class I and II CHR53_01255 PF00392 Bacterial regulatory proteins, gntR family CHR53_01260 PF00005 ABC transporter CHR53_01275 PF00158 Sigma-54 interaction domain CHR53_01275 PF13426 PAS domain CHR53_01275 PF02954 Bacterial regulatory protein, Fis family CHR53_01280 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_01280 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_01285 PF00324 Amino acid permease CHR53_01295 PF02457 DisA bacterial checkpoint controller nucleotide-binding CHR53_01295 PF10372 Bacterial membrane-spanning protein N-terminus CHR53_01300 PF01476 LysM domain CHR53_01300 PF00704 Glycosyl hydrolases family 18 CHR53_01305 PF04185 Phosphoesterase family CHR53_01310 PF03358 NADPH-dependent FMN reductase CHR53_01315 PF03466 LysR substrate binding domain CHR53_01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_01320 PF03176 MMPL family CHR53_01350 PF00300 Histidine phosphatase superfamily (branch 1) CHR53_01355 PF00144 Beta-lactamase CHR53_01360 PF11954 Domain of unknown function (DUF3471) CHR53_01360 PF00144 Beta-lactamase CHR53_01370 PF00872 Transposase, Mutator family CHR53_01380 PF04186 FxsA cytoplasmic membrane protein CHR53_01385 PF01965 DJ-1/PfpI family CHR53_01395 PF00246 Zinc carboxypeptidase CHR53_01395 PF01476 LysM domain CHR53_01400 PF04072 Leucine carboxyl methyltransferase CHR53_01415 PF03176 MMPL family CHR53_01430 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_01445 PF05163 DinB family CHR53_01450 PF00005 ABC transporter CHR53_01465 PF01569 PAP2 superfamily CHR53_01485 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_01490 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_01495 PF17932 Tetracyclin repressor-like, C-terminal domain CHR53_01495 PF00440 Bacterial regulatory proteins, tetR family CHR53_01510 PF00750 tRNA synthetases class I (R) CHR53_01510 PF03485 Arginyl tRNA synthetase N terminal domain CHR53_01510 PF05746 DALR anticodon binding domain CHR53_01520 PF07690 Major Facilitator Superfamily CHR53_01525 PF00893 Small Multidrug Resistance protein CHR53_01530 PF00893 Small Multidrug Resistance protein CHR53_01535 PF09335 SNARE associated Golgi protein CHR53_01540 PF01098 Cell cycle protein CHR53_01545 PF01769 Divalent cation transporter CHR53_01545 PF00571 CBS domain CHR53_01545 PF03448 MgtE intracellular N domain CHR53_01555 PF01820 D-ala D-ala ligase N-terminus CHR53_01555 PF07478 D-ala D-ala ligase C-terminus CHR53_01560 PF08245 Mur ligase middle domain CHR53_01560 PF02875 Mur ligase family, glutamate ligase domain CHR53_01560 PF01225 Mur ligase family, catalytic domain CHR53_01565 PF00270 DEAD/DEAH box helicase CHR53_01565 PF00271 Helicase conserved C-terminal domain CHR53_01585 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_01590 PF03703 Bacterial PH domain CHR53_01595 PF03703 Bacterial PH domain CHR53_01600 PF01694 Rhomboid family CHR53_01605 PF01648 4'-phosphopantetheinyl transferase superfamily CHR53_01620 PF01402 Ribbon-helix-helix protein, copG family CHR53_01625 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CHR53_01630 PF09371 Tex-like protein N-terminal domain CHR53_01630 PF16921 Tex protein YqgF-like domain CHR53_01630 PF00575 S1 RNA binding domain CHR53_01630 PF17674 HHH domain CHR53_01640 PF17283 SprT-like zinc ribbon domain CHR53_01640 PF10263 SprT-like family CHR53_01715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CHR53_01720 PF00814 Glycoprotease family CHR53_01725 PF00583 Acetyltransferase (GNAT) family CHR53_01730 PF00814 Glycoprotease family CHR53_01735 PF16326 ABC transporter C-terminal domain CHR53_01735 PF00005 ABC transporter CHR53_01735 PF12848 ABC transporter CHR53_01740 PF01967 MoaC family CHR53_01745 PF06971 Putative DNA-binding protein N-terminus CHR53_01745 PF02629 CoA binding domain CHR53_01755 PF02517 CPBP intramembrane metalloprotease CHR53_01760 PF00166 Chaperonin 10 Kd subunit CHR53_01765 PF00118 TCP-1/cpn60 chaperonin family CHR53_01770 PF00589 Phage integrase family CHR53_01770 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_01895 PF02424 ApbE family CHR53_01905 PF00486 Transcriptional regulatory protein, C terminal CHR53_01905 PF00072 Response regulator receiver domain CHR53_01910 PF00512 His Kinase A (phospho-acceptor) domain CHR53_01910 PF18719 ArlS sensor domain CHR53_01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_01930 PF03965 Penicillinase repressor CHR53_01935 PF01435 Peptidase family M48 CHR53_01940 PF00933 Glycosyl hydrolase family 3 N terminal domain CHR53_01940 PF01915 Glycosyl hydrolase family 3 C-terminal domain CHR53_01945 PF00313 'Cold-shock' DNA-binding domain CHR53_01960 PF01638 HxlR-like helix-turn-helix CHR53_01980 PF00005 ABC transporter CHR53_01990 PF03390 2-hydroxycarboxylate transporter family CHR53_02025 PF07905 Purine catabolism regulatory protein-like family CHR53_02025 PF17853 GGDEF-like domain CHR53_02025 PF13556 PucR C-terminal helix-turn-helix domain CHR53_02040 PF01968 Hydantoinase/oxoprolinase CHR53_02040 PF05378 Hydantoinase/oxoprolinase N-terminal region CHR53_02045 PF13411 MerR HTH family regulatory protein CHR53_02045 PF13152 Protein of unknown function (DUF3967) CHR53_02065 PF06013 Proteins of 100 residues with WXG CHR53_02085 PF10140 WXG100 protein secretion system (Wss), protein YukC CHR53_02090 PF12538 DNA transporter CHR53_02090 PF01580 FtsK/SpoIIIE family CHR53_02135 PF00158 Sigma-54 interaction domain CHR53_02135 PF02954 Bacterial regulatory protein, Fis family CHR53_02135 PF00072 Response regulator receiver domain CHR53_02140 PF00355 Rieske [2Fe-2S] domain CHR53_02140 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CHR53_02145 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_02145 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_02145 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_02155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_02155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_02160 PF00324 Amino acid permease CHR53_02170 PF00474 Sodium:solute symporter family CHR53_02175 PF00171 Aldehyde dehydrogenase family CHR53_02185 PF03851 UV-endonuclease UvdE CHR53_02190 PF03851 UV-endonuclease UvdE CHR53_02215 PF00005 ABC transporter CHR53_02215 PF08402 TOBE domain CHR53_02220 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_02225 PF13419 Haloacid dehalogenase-like hydrolase CHR53_02230 PF00266 Aminotransferase class-V CHR53_02240 PF00455 DeoR C terminal sensor domain CHR53_02240 PF08220 DeoR-like helix-turn-helix domain CHR53_02250 PF00392 Bacterial regulatory proteins, gntR family CHR53_02250 PF00155 Aminotransferase class I and II CHR53_02260 PF07859 alpha/beta hydrolase fold CHR53_02265 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CHR53_02265 PF00355 Rieske [2Fe-2S] domain CHR53_02270 PF00171 Aldehyde dehydrogenase family CHR53_02275 PF00180 Isocitrate/isopropylmalate dehydrogenase CHR53_02280 PF02028 BCCT, betaine/carnitine/choline family transporter CHR53_02290 PF00474 Sodium:solute symporter family CHR53_02295 PF07726 ATPase family associated with various cellular activities (AAA) CHR53_02295 PF17863 AAA lid domain CHR53_02300 PF01882 Protein of unknown function DUF58 CHR53_02305 PF13559 Domain of unknown function (DUF4129) CHR53_02305 PF11992 Domain of unknown function (DUF3488) CHR53_02305 PF01841 Transglutaminase-like superfamily CHR53_02310 PF00958 GMP synthase C terminal domain CHR53_02310 PF00117 Glutamine amidotransferase class-I CHR53_02310 PF02540 NAD synthase CHR53_02315 PF00872 Transposase, Mutator family CHR53_02320 PF00860 Permease family CHR53_02325 PF00005 ABC transporter CHR53_02340 PF00874 PRD domain CHR53_02340 PF03123 CAT RNA binding domain CHR53_02345 PF02378 Phosphotransferase system, EIIC CHR53_02345 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CHR53_02345 PF00367 phosphotransferase system, EIIB CHR53_02370 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_02380 PF00731 AIR carboxylase CHR53_02385 PF02222 ATP-grasp domain CHR53_02385 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain CHR53_02390 PF10397 Adenylosuccinate lyase C-terminus CHR53_02390 PF00206 Lyase CHR53_02395 PF01259 SAICAR synthetase CHR53_02400 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CHR53_02410 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CHR53_02410 PF02769 AIR synthase related protein, C-terminal domain CHR53_02410 PF00586 AIR synthase related protein, N-terminal domain CHR53_02415 PF00156 Phosphoribosyl transferase domain CHR53_02420 PF02769 AIR synthase related protein, C-terminal domain CHR53_02420 PF00586 AIR synthase related protein, N-terminal domain CHR53_02425 PF00551 Formyl transferase CHR53_02430 PF01808 AICARFT/IMPCHase bienzyme CHR53_02430 PF02142 MGS-like domain CHR53_02435 PF02844 Phosphoribosylglycinamide synthetase, N domain CHR53_02435 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CHR53_02435 PF02843 Phosphoribosylglycinamide synthetase, C domain CHR53_02440 PF11127 Protein of unknown function (DUF2892) CHR53_02445 PF01979 Amidohydrolase family CHR53_02445 PF13382 Adenine deaminase C-terminal domain CHR53_02450 PF17479 Protein of unknown function (DUF3048) C-terminal domain CHR53_02450 PF11258 Protein of unknown function (DUF3048) N-terminal domain CHR53_02455 PF01371 Trp repressor protein CHR53_02460 PF01884 PcrB family CHR53_02465 PF13361 UvrD-like helicase C-terminal domain CHR53_02465 PF00580 UvrD/REP helicase N-terminal domain CHR53_02470 PF12826 Helix-hairpin-helix motif CHR53_02470 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CHR53_02470 PF03120 NAD-dependent DNA ligase OB-fold domain CHR53_02470 PF00533 BRCA1 C Terminus (BRCT) domain CHR53_02470 PF01653 NAD-dependent DNA ligase adenylation domain CHR53_02475 PF07537 CamS sex pheromone cAM373 precursor CHR53_02480 PF00171 Aldehyde dehydrogenase family CHR53_02490 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_02495 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_02500 PF03845 Spore germination protein CHR53_02505 PF00082 Subtilase family CHR53_02505 PF05922 Peptidase inhibitor I9 CHR53_02515 PF13302 Acetyltransferase (GNAT) domain CHR53_02535 PF01274 Malate synthase CHR53_02540 PF00463 Isocitrate lyase family CHR53_02545 PF00854 POT family CHR53_02550 PF07997 Protein of unknown function (DUF1694) CHR53_02565 PF02566 OsmC-like protein CHR53_02575 PF02686 Glu-tRNAGln amidotransferase C subunit CHR53_02580 PF01425 Amidase CHR53_02585 PF02637 GatB domain CHR53_02585 PF02934 GatB/GatE catalytic domain CHR53_02590 PF00474 Sodium:solute symporter family CHR53_02600 PF02660 Glycerol-3-phosphate acyltransferase CHR53_02605 PF08241 Methyltransferase domain CHR53_02610 PF00005 ABC transporter CHR53_02615 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_02620 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_02630 PF08281 Sigma-70, region 4 CHR53_02630 PF04542 Sigma-70 region 2 CHR53_02650 PF00781 Diacylglycerol kinase catalytic domain CHR53_02655 PF00857 Isochorismatase family CHR53_02660 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CHR53_02660 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CHR53_02660 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CHR53_02665 PF00209 Sodium:neurotransmitter symporter family CHR53_02680 PF00873 AcrB/AcrD/AcrF family CHR53_02690 PF13847 Methyltransferase domain CHR53_02690 PF05958 tRNA (Uracil-5-)-methyltransferase CHR53_02690 PF01938 TRAM domain CHR53_02715 PF02463 RecF/RecN/SMC N terminal domain CHR53_02720 PF00580 UvrD/REP helicase N-terminal domain CHR53_02720 PF13361 UvrD-like helicase C-terminal domain CHR53_02755 PF00924 Mechanosensitive ion channel CHR53_02760 PF17755 UvrA DNA-binding domain CHR53_02760 PF00005 ABC transporter CHR53_02760 PF17760 UvrA interaction domain CHR53_02770 PF05698 Bacterial trigger factor protein (TF) C-terminus CHR53_02780 PF08543 Phosphomethylpyrimidine kinase CHR53_02790 PF01207 Dihydrouridine synthase (Dus) CHR53_02800 PF12746 GNAT acetyltransferase CHR53_02820 PF00753 Metallo-beta-lactamase superfamily CHR53_02820 PF16123 Hydroxyacylglutathione hydrolase C-terminus CHR53_02835 PF01497 Periplasmic binding protein CHR53_02840 PF01032 FecCD transport family CHR53_02845 PF00005 ABC transporter CHR53_02850 PF07685 CobB/CobQ-like glutamine amidotransferase domain CHR53_02850 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHR53_02855 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CHR53_02860 PF17760 UvrA interaction domain CHR53_02860 PF17755 UvrA DNA-binding domain CHR53_02860 PF00005 ABC transporter CHR53_02865 PF01476 LysM domain CHR53_02865 PF00877 NlpC/P60 family CHR53_02865 PF08239 Bacterial SH3 domain CHR53_02870 PF02868 Thermolysin metallopeptidase, alpha-helical domain CHR53_02870 PF01447 Thermolysin metallopeptidase, catalytic domain CHR53_02870 PF03413 Peptidase propeptide and YPEB domain CHR53_02870 PF07504 Fungalysin/Thermolysin Propeptide Motif CHR53_02875 PF00155 Aminotransferase class I and II CHR53_02880 PF01470 Pyroglutamyl peptidase CHR53_02885 PF00258 Flavodoxin CHR53_02885 PF00667 FAD binding domain CHR53_02885 PF00175 Oxidoreductase NAD-binding domain CHR53_02895 PF00324 Amino acid permease CHR53_02905 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term CHR53_02905 PF12833 Helix-turn-helix domain CHR53_02910 PF00106 short chain dehydrogenase CHR53_02940 PF07687 Peptidase dimerisation domain CHR53_02940 PF01546 Peptidase family M20/M25/M40 CHR53_02950 PF00892 EamA-like transporter family CHR53_02955 PF07690 Major Facilitator Superfamily CHR53_02960 PF03466 LysR substrate binding domain CHR53_02960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_02965 PF01925 Sulfite exporter TauE/SafE CHR53_02980 PF02678 Pirin CHR53_02980 PF05726 Pirin C-terminal cupin domain CHR53_02990 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_02995 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03000 PF00005 ABC transporter CHR53_03005 PF17676 LD-carboxypeptidase C-terminal domain CHR53_03005 PF02016 LD-carboxypeptidase N-terminal domain CHR53_03015 PF00398 Ribosomal RNA adenine dimethylase CHR53_03025 PF00883 Cytosol aminopeptidase family, catalytic domain CHR53_03025 PF02789 Cytosol aminopeptidase family, N-terminal domain CHR53_03030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_03035 PF02696 Uncharacterized ACR, YdiU/UPF0061 family CHR53_03050 PF00255 Glutathione peroxidase CHR53_03055 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CHR53_03055 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CHR53_03065 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03070 PF00005 ABC transporter CHR53_03075 PF11954 Domain of unknown function (DUF3471) CHR53_03075 PF00144 Beta-lactamase CHR53_03085 PF00582 Universal stress protein family CHR53_03100 PF00005 ABC transporter CHR53_03105 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03110 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03115 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_03120 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CHR53_03120 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_03120 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_03125 PF01040 UbiA prenyltransferase family CHR53_03130 PF00701 Dihydrodipicolinate synthetase family CHR53_03140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CHR53_03145 PF00367 phosphotransferase system, EIIB CHR53_03145 PF02378 Phosphotransferase system, EIIC CHR53_03150 PF03123 CAT RNA binding domain CHR53_03150 PF00874 PRD domain CHR53_03165 PF04397 LytTr DNA-binding domain CHR53_03165 PF00072 Response regulator receiver domain CHR53_03170 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CHR53_03170 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CHR53_03175 PF00300 Histidine phosphatase superfamily (branch 1) CHR53_03180 PF07786 Protein of unknown function (DUF1624) CHR53_03180 PF04235 Protein of unknown function (DUF418) CHR53_03190 PF01032 FecCD transport family CHR53_03195 PF01032 FecCD transport family CHR53_03200 PF00005 ABC transporter CHR53_03205 PF01497 Periplasmic binding protein CHR53_03210 PF00989 PAS fold CHR53_03210 PF13188 PAS domain CHR53_03210 PF00512 His Kinase A (phospho-acceptor) domain CHR53_03210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_03210 PF13426 PAS domain CHR53_03215 PF04308 Ribonuclease H-like CHR53_03225 PF02416 mttA/Hcf106 family CHR53_03230 PF00902 Sec-independent protein translocase protein (TatC) CHR53_03240 PF04308 Ribonuclease H-like CHR53_03245 PF00294 pfkB family carbohydrate kinase CHR53_03250 PF04227 Indigoidine synthase A like protein CHR53_03285 PF00209 Sodium:neurotransmitter symporter family CHR53_03290 PF02632 BioY family CHR53_03295 PF00990 Diguanylate cyclase, GGDEF domain CHR53_03295 PF07694 5TMR of 5TMR-LYT CHR53_03300 PF01235 Sodium:alanine symporter family CHR53_03305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_03310 PF00248 Aldo/keto reductase family CHR53_03315 PF00392 Bacterial regulatory proteins, gntR family CHR53_03320 PF00005 ABC transporter CHR53_03335 PF01614 Bacterial transcriptional regulator CHR53_03335 PF09339 IclR helix-turn-helix domain CHR53_03350 PF01546 Peptidase family M20/M25/M40 CHR53_03355 PF00324 Amino acid permease CHR53_03360 PF00375 Sodium:dicarboxylate symporter family CHR53_03395 PF05593 RHS Repeat CHR53_03395 PF03527 RHS protein CHR53_03420 PF01501 Glycosyl transferase family 8 CHR53_03430 PF01501 Glycosyl transferase family 8 CHR53_03440 PF04542 Sigma-70 region 2 CHR53_03440 PF04545 Sigma-70, region 4 CHR53_03450 PF00155 Aminotransferase class I and II CHR53_03455 PF01037 Lrp/AsnC ligand binding domain CHR53_03460 PF01546 Peptidase family M20/M25/M40 CHR53_03460 PF07687 Peptidase dimerisation domain CHR53_03465 PF03606 C4-dicarboxylate anaerobic carrier CHR53_03475 PF03601 Conserved hypothetical protein 698 CHR53_03480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_03480 PF03466 LysR substrate binding domain CHR53_03485 PF01546 Peptidase family M20/M25/M40 CHR53_03485 PF07687 Peptidase dimerisation domain CHR53_03530 PF02811 PHP domain CHR53_03535 PF00535 Glycosyl transferase family 2 CHR53_03550 PF01925 Sulfite exporter TauE/SafE CHR53_03560 PF01747 ATP-sulfurylase CHR53_03560 PF14306 PUA-like domain CHR53_03580 PF14398 YheC/D like ATP-grasp CHR53_03590 PF01225 Mur ligase family, catalytic domain CHR53_03590 PF02875 Mur ligase family, glutamate ligase domain CHR53_03590 PF08245 Mur ligase middle domain CHR53_03600 PF14398 YheC/D like ATP-grasp CHR53_03605 PF16655 PhoD-like phosphatase, N-terminal domain CHR53_03605 PF09423 PhoD-like phosphatase CHR53_03610 PF02416 mttA/Hcf106 family CHR53_03615 PF00902 Sec-independent protein translocase protein (TatC) CHR53_03620 PF04011 LemA family CHR53_03635 PF00672 HAMP domain CHR53_03635 PF06580 Histidine kinase CHR53_03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_03635 PF02743 Cache domain CHR53_03645 PF13416 Bacterial extracellular solute-binding protein CHR53_03650 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03655 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03675 PF02347 Glycine cleavage system P-protein CHR53_03680 PF02347 Glycine cleavage system P-protein CHR53_03685 PF13416 Bacterial extracellular solute-binding protein CHR53_03690 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03695 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03700 PF02837 Glycosyl hydrolases family 2, sugar binding domain CHR53_03700 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CHR53_03700 PF00703 Glycosyl hydrolases family 2 CHR53_03700 PF16353 Domain of unknown function(DUF4981) CHR53_03700 PF02929 Beta galactosidase small chain CHR53_03705 PF10509 Galactokinase galactose-binding signature CHR53_03705 PF08544 GHMP kinases C terminal CHR53_03705 PF00288 GHMP kinases N terminal domain CHR53_03710 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CHR53_03710 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CHR53_03715 PF01263 Aldose 1-epimerase CHR53_03720 PF00356 Bacterial regulatory proteins, lacI family CHR53_03725 PF00324 Amino acid permease CHR53_03730 PF02347 Glycine cleavage system P-protein CHR53_03735 PF02347 Glycine cleavage system P-protein CHR53_03745 PF00158 Sigma-54 interaction domain CHR53_03745 PF13426 PAS domain CHR53_03745 PF02954 Bacterial regulatory protein, Fis family CHR53_03755 PF00392 Bacterial regulatory proteins, gntR family CHR53_03760 PF00005 ABC transporter CHR53_03770 PF04542 Sigma-70 region 2 CHR53_03770 PF08281 Sigma-70, region 4 CHR53_03775 PF09335 SNARE associated Golgi protein CHR53_03785 PF16360 GTP-binding GTPase Middle Region CHR53_03785 PF13167 GTP-binding GTPase N-terminal CHR53_03785 PF01926 50S ribosome-binding GTPase CHR53_03790 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion CHR53_03795 PF00005 ABC transporter CHR53_03800 PF02687 FtsX-like permease family CHR53_03800 PF00005 ABC transporter CHR53_03800 PF12704 MacB-like periplasmic core domain CHR53_03805 PF00486 Transcriptional regulatory protein, C terminal CHR53_03805 PF00072 Response regulator receiver domain CHR53_03810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_03810 PF00512 His Kinase A (phospho-acceptor) domain CHR53_03830 PF01546 Peptidase family M20/M25/M40 CHR53_03830 PF07687 Peptidase dimerisation domain CHR53_03845 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_03845 PF13378 Enolase C-terminal domain-like CHR53_03860 PF07687 Peptidase dimerisation domain CHR53_03860 PF01546 Peptidase family M20/M25/M40 CHR53_03865 PF07687 Peptidase dimerisation domain CHR53_03865 PF01546 Peptidase family M20/M25/M40 CHR53_03870 PF00563 EAL domain CHR53_03870 PF00990 Diguanylate cyclase, GGDEF domain CHR53_03870 PF03707 Bacterial signalling protein N terminal repeat CHR53_03875 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_03875 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_03875 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_03885 PF12849 PBP superfamily domain CHR53_03890 PF00753 Metallo-beta-lactamase superfamily CHR53_03890 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CHR53_03890 PF17770 Ribonuclease J C-terminal domain CHR53_03895 PF02397 Bacterial sugar transferase CHR53_03900 PF01943 Polysaccharide biosynthesis protein CHR53_03900 PF14667 Polysaccharide biosynthesis C-terminal domain CHR53_03905 PF00534 Glycosyl transferases group 1 CHR53_03905 PF13439 Glycosyltransferase Family 4 CHR53_03910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHR53_03910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHR53_03910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHR53_03915 PF04932 O-Antigen ligase CHR53_03920 PF02706 Chain length determinant protein CHR53_03925 PF00535 Glycosyl transferase family 2 CHR53_03950 PF02664 S-Ribosylhomocysteinase (LuxS) CHR53_03960 PF00704 Glycosyl hydrolases family 18 CHR53_03960 PF01476 LysM domain CHR53_03970 PF01047 MarR family CHR53_03970 PF00480 ROK family CHR53_03980 PF08402 TOBE domain CHR53_03980 PF00005 ABC transporter CHR53_03985 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_03990 PF00206 Lyase CHR53_03990 PF14698 Argininosuccinate lyase C-terminal CHR53_03995 PF12706 Beta-lactamase superfamily domain CHR53_04010 PF12804 MobA-like NTP transferase domain CHR53_04020 PF01047 MarR family CHR53_04025 PF00893 Small Multidrug Resistance protein CHR53_04030 PF00893 Small Multidrug Resistance protein CHR53_04035 PF00440 Bacterial regulatory proteins, tetR family CHR53_04035 PF17934 Tetracyclin repressor-like, C-terminal domain CHR53_04040 PF00109 Beta-ketoacyl synthase, N-terminal domain CHR53_04040 PF02801 Beta-ketoacyl synthase, C-terminal domain CHR53_04055 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_04060 PF01063 Amino-transferase class IV CHR53_04065 PF03069 Acetamidase/Formamidase family CHR53_04075 PF13739 Deacetylase PdaC CHR53_04075 PF11738 Protein of unknown function (DUF3298) CHR53_04080 PF04542 Sigma-70 region 2 CHR53_04080 PF08281 Sigma-70, region 4 CHR53_04085 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_04090 PF00005 ABC transporter CHR53_04105 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_04105 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_04115 PF16874 Glycosyl hydrolase family 36 C-terminal domain CHR53_04115 PF16875 Glycosyl hydrolase family 36 N-terminal domain CHR53_04120 PF02386 Cation transport protein CHR53_04125 PF01713 Smr domain CHR53_04125 PF00488 MutS domain V CHR53_04130 PF02447 GntP family permease CHR53_04135 PF00158 Sigma-54 interaction domain CHR53_04135 PF02954 Bacterial regulatory protein, Fis family CHR53_04135 PF13188 PAS domain CHR53_04140 PF07005 Sugar-binding N-terminal domain CHR53_04140 PF17042 Nucleotide-binding C-terminal domain CHR53_04145 PF04166 Pyridoxal phosphate biosynthetic protein PdxA CHR53_04160 PF10127 RNA repair pathway DNA polymerase beta family CHR53_04180 PF02603 HPr Serine kinase N terminus CHR53_04180 PF07475 HPr Serine kinase C-terminal domain CHR53_04200 PF13439 Glycosyltransferase Family 4 CHR53_04200 PF00534 Glycosyl transferases group 1 CHR53_04205 PF01569 PAP2 superfamily CHR53_04210 PF03860 Domain of Unknown Function (DUF326) CHR53_04215 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 CHR53_04240 PF07969 Amidohydrolase family CHR53_04245 PF01497 Periplasmic binding protein CHR53_04250 PF01032 FecCD transport family CHR53_04255 PF01032 FecCD transport family CHR53_04260 PF00005 ABC transporter CHR53_04270 PF00294 pfkB family carbohydrate kinase CHR53_04285 PF04227 Indigoidine synthase A like protein CHR53_04290 PF01773 Na+ dependent nucleoside transporter N-terminus CHR53_04290 PF07662 Na+ dependent nucleoside transporter C-terminus CHR53_04300 PF03458 UPF0126 domain CHR53_04310 PF01872 RibD C-terminal domain CHR53_04315 PF04239 Protein of unknown function (DUF421) CHR53_04375 PF00583 Acetyltransferase (GNAT) family CHR53_04380 PF06445 GyrI-like small molecule binding domain CHR53_04380 PF12833 Helix-turn-helix domain CHR53_04390 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHR53_04400 PF03167 Uracil DNA glycosylase superfamily CHR53_04410 PF03061 Thioesterase superfamily CHR53_04415 PF01541 GIY-YIG catalytic domain CHR53_04420 PF01925 Sulfite exporter TauE/SafE CHR53_04470 PF13520 Amino acid permease CHR53_04475 PF03965 Penicillinase repressor CHR53_04480 PF05569 BlaR1 peptidase M56 CHR53_04480 PF00905 Penicillin binding protein transpeptidase domain CHR53_04520 PF03358 NADPH-dependent FMN reductase CHR53_04530 PF01738 Dienelactone hydrolase family CHR53_04535 PF02566 OsmC-like protein CHR53_04540 PF03358 NADPH-dependent FMN reductase CHR53_04560 PF10372 Bacterial membrane-spanning protein N-terminus CHR53_04560 PF02457 DisA bacterial checkpoint controller nucleotide-binding CHR53_04565 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) CHR53_04575 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_04590 PF00216 Bacterial DNA-binding protein CHR53_04600 PF13243 Squalene-hopene cyclase C-terminal domain CHR53_04600 PF13249 Squalene-hopene cyclase N-terminal domain CHR53_04615 PF00588 SpoU rRNA Methylase family CHR53_04630 PF00392 Bacterial regulatory proteins, gntR family CHR53_04630 PF07729 FCD domain CHR53_04635 PF01266 FAD dependent oxidoreductase CHR53_04645 PF08943 CsiD CHR53_04655 PF01968 Hydantoinase/oxoprolinase CHR53_04655 PF05378 Hydantoinase/oxoprolinase N-terminal region CHR53_04660 PF02538 Hydantoinase B/oxoprolinase CHR53_04675 PF00324 Amino acid permease CHR53_04680 PF00202 Aminotransferase class-III CHR53_04685 PF00171 Aldehyde dehydrogenase family CHR53_04690 PF03466 LysR substrate binding domain CHR53_04690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_04695 PF01938 TRAM domain CHR53_04695 PF05958 tRNA (Uracil-5-)-methyltransferase CHR53_04700 PF00188 Cysteine-rich secretory protein family CHR53_04705 PF00970 Oxidoreductase FAD-binding domain CHR53_04705 PF00042 Globin CHR53_04705 PF00175 Oxidoreductase NAD-binding domain CHR53_04710 PF01022 Bacterial regulatory protein, arsR family CHR53_04715 PF02040 Arsenical pump membrane protein CHR53_04720 PF01451 Low molecular weight phosphotyrosine protein phosphatase CHR53_04725 PF00056 lactate/malate dehydrogenase, NAD binding domain CHR53_04725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CHR53_04755 PF07690 Major Facilitator Superfamily CHR53_04760 PF07687 Peptidase dimerisation domain CHR53_04760 PF01546 Peptidase family M20/M25/M40 CHR53_04770 PF01613 Flavin reductase like domain CHR53_04775 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CHR53_04775 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CHR53_04780 PF06574 FAD synthetase CHR53_04790 PF01546 Peptidase family M20/M25/M40 CHR53_04790 PF07687 Peptidase dimerisation domain CHR53_04795 PF00324 Amino acid permease CHR53_04815 PF01636 Phosphotransferase enzyme family CHR53_04825 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_04840 PF00176 SNF2 family N-terminal domain CHR53_04840 PF00271 Helicase conserved C-terminal domain CHR53_04840 PF12419 SNF2 Helicase protein CHR53_04860 PF01965 DJ-1/PfpI family CHR53_04875 PF00625 Guanylate kinase CHR53_04880 PF13539 D-alanyl-D-alanine carboxypeptidase CHR53_04885 PF01554 MatE CHR53_04890 PF07732 Multicopper oxidase CHR53_04890 PF07731 Multicopper oxidase CHR53_04890 PF00394 Multicopper oxidase CHR53_04895 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_04905 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_04915 PF05360 yiaA/B two helix domain CHR53_04920 PF01645 Conserved region in glutamate synthase CHR53_04930 PF01546 Peptidase family M20/M25/M40 CHR53_04930 PF07687 Peptidase dimerisation domain CHR53_04935 PF01546 Peptidase family M20/M25/M40 CHR53_04935 PF07687 Peptidase dimerisation domain CHR53_04940 PF03475 3-alpha domain CHR53_04940 PF03473 MOSC domain CHR53_04950 PF00293 NUDIX domain CHR53_04965 PF01565 FAD binding domain CHR53_04965 PF02913 FAD linked oxidases, C-terminal domain CHR53_04970 PF01641 SelR domain CHR53_04970 PF01625 Peptide methionine sulfoxide reductase CHR53_04990 PF02824 TGS domain CHR53_04990 PF04607 Region found in RelA / SpoT proteins CHR53_04990 PF13291 ACT domain CHR53_04995 PF04607 Region found in RelA / SpoT proteins CHR53_04995 PF02824 TGS domain CHR53_04995 PF13291 ACT domain CHR53_05005 PF13419 Haloacid dehalogenase-like hydrolase CHR53_05010 PF13026 Protein of unknown function (DUF3887) CHR53_05010 PF12146 Serine aminopeptidase, S33 CHR53_05015 PF12679 ABC-2 family transporter protein CHR53_05020 PF13732 Domain of unknown function (DUF4162) CHR53_05020 PF00005 ABC transporter CHR53_05035 PF00392 Bacterial regulatory proteins, gntR family CHR53_05040 PF13115 YtkA-like CHR53_05050 PF00486 Transcriptional regulatory protein, C terminal CHR53_05050 PF00072 Response regulator receiver domain CHR53_05055 PF00672 HAMP domain CHR53_05055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05055 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05055 PF13426 PAS domain CHR53_05070 PF01098 Cell cycle protein CHR53_05080 PF01810 LysE type translocator CHR53_05085 PF00589 Phage integrase family CHR53_05100 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CHR53_05105 PF00361 Proton-conducting membrane transporter CHR53_05110 PF01899 Na+/H+ ion antiporter subunit CHR53_05115 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) CHR53_05130 PF00293 NUDIX domain CHR53_05135 PF07690 Major Facilitator Superfamily CHR53_05140 PF13291 ACT domain CHR53_05140 PF04607 Region found in RelA / SpoT proteins CHR53_05140 PF02824 TGS domain CHR53_05155 PF04304 Protein of unknown function (DUF454) CHR53_05160 PF00072 Response regulator receiver domain CHR53_05160 PF00486 Transcriptional regulatory protein, C terminal CHR53_05165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05165 PF00672 HAMP domain CHR53_05165 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05185 PF00375 Sodium:dicarboxylate symporter family CHR53_05190 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05190 PF02743 Cache domain CHR53_05200 PF08281 Sigma-70, region 4 CHR53_05200 PF04542 Sigma-70 region 2 CHR53_05230 PF10502 Signal peptidase, peptidase S26 CHR53_05235 PF10138 vWA found in TerF C terminus CHR53_05240 PF03575 Peptidase family S51 CHR53_05250 PF04299 Putative FMN-binding domain CHR53_05255 PF00583 Acetyltransferase (GNAT) family CHR53_05260 PF01047 MarR family CHR53_05275 PF03413 Peptidase propeptide and YPEB domain CHR53_05275 PF01447 Thermolysin metallopeptidase, catalytic domain CHR53_05275 PF02868 Thermolysin metallopeptidase, alpha-helical domain CHR53_05275 PF07504 Fungalysin/Thermolysin Propeptide Motif CHR53_05280 PF00072 Response regulator receiver domain CHR53_05280 PF00486 Transcriptional regulatory protein, C terminal CHR53_05285 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05290 PF07943 Penicillin-binding protein 5, C-terminal domain CHR53_05290 PF00768 D-alanyl-D-alanine carboxypeptidase CHR53_05295 PF06968 Biotin and Thiamin Synthesis associated domain CHR53_05295 PF04055 Radical SAM superfamily CHR53_05300 PF00266 Aminotransferase class-V CHR53_05305 PF02652 L-lactate permease CHR53_05310 PF07729 FCD domain CHR53_05310 PF00392 Bacterial regulatory proteins, gntR family CHR53_05315 PF02754 Cysteine-rich domain CHR53_05320 PF02589 LUD domain CHR53_05320 PF13183 4Fe-4S dicluster domain CHR53_05320 PF11870 Domain of unknown function (DUF3390) CHR53_05325 PF02589 LUD domain CHR53_05340 PF08281 Sigma-70, region 4 CHR53_05340 PF04542 Sigma-70 region 2 CHR53_05360 PF00005 ABC transporter CHR53_05365 PF00005 ABC transporter CHR53_05370 PF00266 Aminotransferase class-V CHR53_05375 PF00083 Sugar (and other) transporter CHR53_05375 PF07690 Major Facilitator Superfamily CHR53_05380 PF02423 Ornithine cyclodeaminase/mu-crystallin family CHR53_05410 PF00486 Transcriptional regulatory protein, C terminal CHR53_05410 PF00072 Response regulator receiver domain CHR53_05415 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05415 PF00672 HAMP domain CHR53_05415 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05445 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) CHR53_05450 PF03992 Antibiotic biosynthesis monooxygenase CHR53_05455 PF01636 Phosphotransferase enzyme family CHR53_05475 PF13416 Bacterial extracellular solute-binding protein CHR53_05480 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_05485 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_05490 PF00005 ABC transporter CHR53_05490 PF08402 TOBE domain CHR53_05500 PF00753 Metallo-beta-lactamase superfamily CHR53_05505 PF00440 Bacterial regulatory proteins, tetR family CHR53_05505 PF13305 Tetracyclin repressor-like, C-terminal domain CHR53_05525 PF06177 QueT transporter CHR53_05530 PF00356 Bacterial regulatory proteins, lacI family CHR53_05535 PF00367 phosphotransferase system, EIIB CHR53_05535 PF02378 Phosphotransferase system, EIIC CHR53_05540 PF00251 Glycosyl hydrolases family 32 N-terminal domain CHR53_05540 PF08244 Glycosyl hydrolases family 32 C terminal CHR53_05545 PF00294 pfkB family carbohydrate kinase CHR53_05555 PF13302 Acetyltransferase (GNAT) domain CHR53_05565 PF00933 Glycosyl hydrolase family 3 N terminal domain CHR53_05565 PF01915 Glycosyl hydrolase family 3 C-terminal domain CHR53_05575 PF00805 Pentapeptide repeats (8 copies) CHR53_05580 PF07690 Major Facilitator Superfamily CHR53_05585 PF00893 Small Multidrug Resistance protein CHR53_05590 PF00893 Small Multidrug Resistance protein CHR53_05595 PF01152 Bacterial-like globin CHR53_05605 PF00128 Alpha amylase, catalytic domain CHR53_05605 PF02903 Alpha amylase, N-terminal ig-like domain CHR53_05605 PF16657 Maltogenic Amylase, C-terminal domain CHR53_05610 PF13416 Bacterial extracellular solute-binding protein CHR53_05615 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_05620 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_05625 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CHR53_05625 PF00356 Bacterial regulatory proteins, lacI family CHR53_05630 PF00128 Alpha amylase, catalytic domain CHR53_05630 PF16657 Maltogenic Amylase, C-terminal domain CHR53_05635 PF01554 MatE CHR53_05645 PF02628 Cytochrome oxidase assembly protein CHR53_05660 PF01758 Sodium Bile acid symporter family CHR53_05665 PF00860 Permease family CHR53_05670 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CHR53_05685 PF03576 Peptidase family S58 CHR53_05690 PF12728 Helix-turn-helix domain CHR53_05695 PF04343 Protein of unknown function, DUF488 CHR53_05700 PF03006 Haemolysin-III related CHR53_05710 PF00892 EamA-like transporter family CHR53_05715 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain CHR53_05715 PF12708 Pectate lyase superfamily protein CHR53_05720 PF13031 Protein of unknown function (DUF3892) CHR53_05725 PF13508 Acetyltransferase (GNAT) domain CHR53_05730 PF00694 Aconitase C-terminal domain CHR53_05735 PF00330 Aconitase family (aconitate hydratase) CHR53_05740 PF00180 Isocitrate/isopropylmalate dehydrogenase CHR53_05745 PF00682 HMGL-like CHR53_05745 PF08502 LeuA allosteric (dimerisation) domain CHR53_05750 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CHR53_05750 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CHR53_05755 PF01842 ACT domain CHR53_05755 PF10369 Small subunit of acetolactate synthase CHR53_05760 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_05760 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_05760 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_05765 PF00920 Dehydratase family CHR53_05775 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_05780 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_05785 PF00005 ABC transporter CHR53_05805 PF01139 tRNA-splicing ligase RtcB CHR53_05810 PF13302 Acetyltransferase (GNAT) domain CHR53_05815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_05820 PF07690 Major Facilitator Superfamily CHR53_05830 PF00108 Thiolase, N-terminal domain CHR53_05830 PF02803 Thiolase, C-terminal domain CHR53_05835 PF00501 AMP-binding enzyme CHR53_05835 PF13193 AMP-binding enzyme C-terminal domain CHR53_05840 PF13419 Haloacid dehalogenase-like hydrolase CHR53_05850 PF00270 DEAD/DEAH box helicase CHR53_05850 PF09382 RQC domain CHR53_05850 PF16124 RecQ zinc-binding CHR53_05850 PF00570 HRDC domain CHR53_05850 PF00271 Helicase conserved C-terminal domain CHR53_05855 PF01476 LysM domain CHR53_05855 PF00704 Glycosyl hydrolases family 18 CHR53_05860 PF00005 ABC transporter CHR53_05870 PF02558 Ketopantoate reductase PanE/ApbA CHR53_05870 PF08546 Ketopantoate reductase PanE/ApbA C terminal CHR53_05875 PF07690 Major Facilitator Superfamily CHR53_05880 PF06738 Putative threonine/serine exporter CHR53_05885 PF12821 Threonine/Serine exporter, ThrE CHR53_05885 PF06738 Putative threonine/serine exporter CHR53_05890 PF13529 Peptidase_C39 like family CHR53_05895 PF01425 Amidase CHR53_05900 PF00512 His Kinase A (phospho-acceptor) domain CHR53_05900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05900 PF13188 PAS domain CHR53_05900 PF13426 PAS domain CHR53_05900 PF00989 PAS fold CHR53_05905 PF01966 HD domain CHR53_05910 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHR53_05915 PF01348 Type II intron maturase CHR53_05915 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHR53_05930 PF01568 Molydopterin dinucleotide binding domain CHR53_05930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHR53_05930 PF00384 Molybdopterin oxidoreductase CHR53_05965 PF00196 Bacterial regulatory proteins, luxR family CHR53_05965 PF00072 Response regulator receiver domain CHR53_05975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_05975 PF07730 Histidine kinase CHR53_05980 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CHR53_05980 PF00749 tRNA synthetases class I (E and Q), catalytic domain CHR53_05985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHR53_05990 PF05525 Branched-chain amino acid transport protein CHR53_05995 PF12801 4Fe-4S binding domain CHR53_06005 PF13545 Crp-like helix-turn-helix domain CHR53_06005 PF00027 Cyclic nucleotide-binding domain CHR53_06020 PF00270 DEAD/DEAH box helicase CHR53_06020 PF00271 Helicase conserved C-terminal domain CHR53_06030 PF01425 Amidase CHR53_06035 PF01266 FAD dependent oxidoreductase CHR53_06035 PF00355 Rieske [2Fe-2S] domain CHR53_06040 PF07098 Protein of unknown function (DUF1360) CHR53_06045 PF00188 Cysteine-rich secretory protein family CHR53_06060 PF09922 Cell wall-active antibiotics response 4TMS YvqF CHR53_06065 PF07730 Histidine kinase CHR53_06065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_06070 PF00072 Response regulator receiver domain CHR53_06070 PF00196 Bacterial regulatory proteins, luxR family CHR53_06075 PF09375 Imelysin CHR53_06080 PF10518 TAT (twin-arginine translocation) pathway signal sequence CHR53_06080 PF04261 Dyp-type peroxidase family CHR53_06085 PF03239 Iron permease FTR1 family CHR53_06090 PF01943 Polysaccharide biosynthesis protein CHR53_06100 PF01027 Inhibitor of apoptosis-promoting Bax1 CHR53_06105 PF01741 Large-conductance mechanosensitive channel, MscL CHR53_06110 PF02073 Thermophilic metalloprotease (M29) CHR53_06115 PF01751 Toprim domain CHR53_06115 PF01131 DNA topoisomerase CHR53_06125 PF00221 Aromatic amino acid lyase CHR53_06135 PF09350 Domain of unknown function (DUF1992) CHR53_06140 PF00294 pfkB family carbohydrate kinase CHR53_06150 PF08671 Anti-repressor SinI CHR53_06150 PF01381 Helix-turn-helix CHR53_06155 PF00557 Metallopeptidase family M24 CHR53_06160 PF06569 Protein of unknown function (DUF1128) CHR53_06170 PF03631 Virulence factor BrkB CHR53_06180 PF07690 Major Facilitator Superfamily CHR53_06185 PF01699 Sodium/calcium exchanger protein CHR53_06190 PF14167 YfkD-like protein CHR53_06200 PF05681 Fumarate hydratase (Fumerase) CHR53_06200 PF05683 Fumarase C-terminus CHR53_06210 PF01522 Polysaccharide deacetylase CHR53_06215 PF00512 His Kinase A (phospho-acceptor) domain CHR53_06215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_06220 PF01938 TRAM domain CHR53_06220 PF05958 tRNA (Uracil-5-)-methyltransferase CHR53_06225 PF00005 ABC transporter CHR53_06225 PF00571 CBS domain CHR53_06230 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_06250 PF00313 'Cold-shock' DNA-binding domain CHR53_06255 PF07308 Protein of unknown function (DUF1456) CHR53_06260 PF00474 Sodium:solute symporter family CHR53_06265 PF07694 5TMR of 5TMR-LYT CHR53_06265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_06265 PF06580 Histidine kinase CHR53_06270 PF04397 LytTr DNA-binding domain CHR53_06270 PF00072 Response regulator receiver domain CHR53_06275 PF04341 Protein of unknown function, DUF485 CHR53_06280 PF00474 Sodium:solute symporter family CHR53_06290 PF00571 CBS domain CHR53_06290 PF00005 ABC transporter CHR53_06295 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CHR53_06305 PF01259 SAICAR synthetase CHR53_06310 PF01063 Amino-transferase class IV CHR53_06315 PF00877 NlpC/P60 family CHR53_06325 PF02225 PA domain CHR53_06325 PF04389 Peptidase family M28 CHR53_06330 PF00348 Polyprenyl synthetase CHR53_06335 PF01048 Phosphorylase superfamily CHR53_06345 PF07687 Peptidase dimerisation domain CHR53_06345 PF01546 Peptidase family M20/M25/M40 CHR53_06350 PF02225 PA domain CHR53_06350 PF04389 Peptidase family M28 CHR53_06355 PF07690 Major Facilitator Superfamily CHR53_06360 PF13977 BetI-type transcriptional repressor, C-terminal CHR53_06360 PF00440 Bacterial regulatory proteins, tetR family CHR53_06370 PF00005 ABC transporter CHR53_06380 PF00324 Amino acid permease CHR53_06385 PF03773 Predicted permease CHR53_06390 PF09323 Domain of unknown function (DUF1980) CHR53_06400 PF07687 Peptidase dimerisation domain CHR53_06400 PF01546 Peptidase family M20/M25/M40 CHR53_06405 PF00361 Proton-conducting membrane transporter CHR53_06405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CHR53_06410 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) CHR53_06415 PF10057 Uncharacterized conserved protein (DUF2294) CHR53_06425 PF00512 His Kinase A (phospho-acceptor) domain CHR53_06425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_06430 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CHR53_06430 PF09125 Cytochrome C oxidase subunit II, transmembrane CHR53_06435 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_06470 PF03853 YjeF-related protein N-terminus CHR53_06470 PF01256 Carbohydrate kinase CHR53_06475 PF00266 Aminotransferase class-V CHR53_06485 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHR53_06490 PF00854 POT family CHR53_06500 PF13411 MerR HTH family regulatory protein CHR53_06500 PF07739 TipAS antibiotic-recognition domain CHR53_06505 PF00005 ABC transporter CHR53_06505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_06510 PF00005 ABC transporter CHR53_06510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_06515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_06530 PF01202 Shikimate kinase CHR53_06535 PF01487 Type I 3-dehydroquinase CHR53_06545 PF00565 Staphylococcal nuclease homologue CHR53_06545 PF00149 Calcineurin-like phosphoesterase CHR53_06545 PF00746 LPXTG cell wall anchor motif CHR53_06545 PF02872 5'-nucleotidase, C-terminal domain CHR53_06550 PF02774 Semialdehyde dehydrogenase, dimerisation domain CHR53_06550 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHR53_06555 PF01960 ArgJ family CHR53_06560 PF00696 Amino acid kinase family CHR53_06565 PF00202 Aminotransferase class-III CHR53_06570 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CHR53_06570 PF00117 Glutamine amidotransferase class-I CHR53_06575 PF02142 MGS-like domain CHR53_06575 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_06575 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CHR53_06580 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CHR53_06580 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CHR53_06585 PF00764 Arginosuccinate synthase CHR53_06590 PF14698 Argininosuccinate lyase C-terminal CHR53_06590 PF00206 Lyase CHR53_06595 PF00583 Acetyltransferase (GNAT) family CHR53_06595 PF00795 Carbon-nitrogen hydrolase CHR53_06600 PF00583 Acetyltransferase (GNAT) family CHR53_06610 PF00742 Homoserine dehydrogenase CHR53_06610 PF03447 Homoserine dehydrogenase, NAD binding domain CHR53_06610 PF01842 ACT domain CHR53_06620 PF14151 YfhD-like protein CHR53_06630 PF02631 RecX family CHR53_06635 PF00106 short chain dehydrogenase CHR53_06640 PF08838 Protein of unknown function (DUF1811) CHR53_06645 PF08176 Small acid-soluble spore protein K family CHR53_06650 PF14043 WVELL protein CHR53_06655 PF04307 LexA-binding, inner membrane-associated putative hydrolase CHR53_06660 PF00730 HhH-GPD superfamily base excision DNA repair protein CHR53_06660 PF14815 NUDIX domain CHR53_06680 PF14182 YgaB-like protein CHR53_06685 PF04167 Protein of unknown function (DUF402) CHR53_06690 PF00664 ABC transporter transmembrane region CHR53_06690 PF00005 ABC transporter CHR53_06695 PF06081 Aromatic acid exporter family member 1 CHR53_06700 PF00202 Aminotransferase class-III CHR53_06705 PF00005 ABC transporter CHR53_06720 PF07885 Ion channel CHR53_06725 PF00578 AhpC/TSA family CHR53_06730 PF01475 Ferric uptake regulator family CHR53_06735 PF11023 Zinc-ribbon containing domain CHR53_06740 PF18576 Helix-turn-helix domain CHR53_06740 PF14540 Nucleotidyltransferase-like CHR53_06840 PF13419 Haloacid dehalogenase-like hydrolase CHR53_06860 PF10997 Alternate to MurJ CHR53_06875 PF02694 Uncharacterised BCR, YnfA/UPF0060 family CHR53_06885 PF04463 Protein of unknown function (DUF523) CHR53_06890 PF07690 Major Facilitator Superfamily CHR53_06920 PF08331 Domain of unknown function (DUF1730) CHR53_06925 PF12671 Putative amidase domain CHR53_06930 PF00588 SpoU rRNA Methylase family CHR53_06935 PF00881 Nitroreductase family CHR53_06940 PF06798 PrkA serine protein kinase C-terminal domain CHR53_06940 PF08298 PrkA AAA domain CHR53_06945 PF04285 Protein of unknown function (DUF444) CHR53_07030 PF13443 Cro/C1-type HTH DNA-binding domain CHR53_07070 PF01612 3'-5' exonuclease CHR53_07070 PF01367 5'-3' exonuclease, C-terminal SAM fold CHR53_07070 PF00476 DNA polymerase family A CHR53_07070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHR53_07085 PF02811 PHP domain CHR53_07085 PF11490 DNA polymerase III polC-type N-terminus II CHR53_07085 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHR53_07085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHR53_07085 PF14579 Helix-hairpin-helix motif CHR53_07085 PF00929 Exonuclease CHR53_07115 PF02562 PhoH-like protein CHR53_07140 PF00303 Thymidylate synthase CHR53_07145 PF06725 3D domain CHR53_07185 PF06908 YspA SLOG family CHR53_07325 PF01476 LysM domain CHR53_07340 PF10934 Protein of unknown function (DUF2634) CHR53_07345 PF04865 Baseplate J-like protein CHR53_07370 PF10960 BhlA holin family CHR53_07375 PF08924 Domain of unknown function (DUF1906) CHR53_07375 PF01471 Putative peptidoglycan binding domain CHR53_07405 PF01551 Peptidase family M23 CHR53_07420 PF00188 Cysteine-rich secretory protein family CHR53_07425 PF00989 PAS fold CHR53_07425 PF13188 PAS domain CHR53_07425 PF00512 His Kinase A (phospho-acceptor) domain CHR53_07425 PF13426 PAS domain CHR53_07425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_07435 PF01979 Amidohydrolase family CHR53_07440 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CHR53_07455 PF00480 ROK family CHR53_07460 PF02614 Glucuronate isomerase CHR53_07465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CHR53_07465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHR53_07475 PF00106 short chain dehydrogenase CHR53_07480 PF02540 NAD synthase CHR53_07485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_07485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_07490 PF00731 AIR carboxylase CHR53_07495 PF01969 Protein of unknown function DUF111 CHR53_07515 PF01061 ABC-2 type transporter CHR53_07530 PF03176 MMPL family CHR53_07535 PF01791 DeoC/LacD family aldolase CHR53_07540 PF01384 Phosphate transporter family CHR53_07545 PF01865 Protein of unknown function DUF47 CHR53_07550 PF04226 Transglycosylase associated protein CHR53_07555 PF00849 RNA pseudouridylate synthase CHR53_07555 PF01479 S4 domain CHR53_07565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CHR53_07565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CHR53_07565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CHR53_07565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CHR53_07570 PF14148 YhdB-like protein CHR53_07575 PF00246 Zinc carboxypeptidase CHR53_07580 PF04293 SpoVR like protein CHR53_07590 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase CHR53_07595 PF07681 DoxX CHR53_07600 PF03358 NADPH-dependent FMN reductase CHR53_07605 PF16916 Dimerisation domain of Zinc Transporter CHR53_07605 PF01545 Cation efflux family CHR53_07615 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_07615 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_07620 PF17853 GGDEF-like domain CHR53_07620 PF13556 PucR C-terminal helix-turn-helix domain CHR53_07620 PF06018 CodY GAF-like domain CHR53_07625 PF00324 Amino acid permease CHR53_07630 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) CHR53_07640 PF04286 Protein of unknown function (DUF445) CHR53_07650 PF01521 Iron-sulphur cluster biosynthesis CHR53_07670 PF03471 Transporter associated domain CHR53_07670 PF00571 CBS domain CHR53_07670 PF01595 Cyclin M transmembrane N-terminal domain CHR53_07675 PF13411 MerR HTH family regulatory protein CHR53_07680 PF00571 CBS domain CHR53_07680 PF03471 Transporter associated domain CHR53_07680 PF01595 Cyclin M transmembrane N-terminal domain CHR53_07685 PF13302 Acetyltransferase (GNAT) domain CHR53_07690 PF09515 Thiamine transporter protein (Thia_YuaJ) CHR53_07700 PF07670 Nucleoside recognition CHR53_07700 PF02421 Ferrous iron transport protein B CHR53_07700 PF17910 FeoB cytosolic helical domain CHR53_07700 PF07664 Ferrous iron transport protein B C terminus CHR53_07715 PF00905 Penicillin binding protein transpeptidase domain CHR53_07715 PF00912 Transglycosylase CHR53_07730 PF01906 Putative heavy-metal-binding CHR53_07735 PF00005 ABC transporter CHR53_07735 PF00664 ABC transporter transmembrane region CHR53_07740 PF00664 ABC transporter transmembrane region CHR53_07740 PF00005 ABC transporter CHR53_07745 PF10415 Fumarase C C-terminus CHR53_07745 PF00206 Lyase CHR53_07750 PF00269 Small, acid-soluble spore proteins, alpha/beta type CHR53_07760 PF17912 MalK OB fold domain CHR53_07760 PF03459 TOBE domain CHR53_07760 PF00005 ABC transporter CHR53_07765 PF13556 PucR C-terminal helix-turn-helix domain CHR53_07775 PF17277 Family of unknown function (DUF5342) CHR53_07785 PF14398 YheC/D like ATP-grasp CHR53_07790 PF14398 YheC/D like ATP-grasp CHR53_07800 PF06133 Control of competence regulator ComK, YlbF/YmcA CHR53_07810 PF04055 Radical SAM superfamily CHR53_07820 PF00501 AMP-binding enzyme CHR53_07820 PF13193 AMP-binding enzyme C-terminal domain CHR53_07825 PF00378 Enoyl-CoA hydratase/isomerase CHR53_07835 PF13732 Domain of unknown function (DUF4162) CHR53_07835 PF00005 ABC transporter CHR53_07845 PF00149 Calcineurin-like phosphoesterase CHR53_07850 PF13514 AAA domain CHR53_07855 PF01966 HD domain CHR53_07865 PF05698 Bacterial trigger factor protein (TF) C-terminus CHR53_07870 PF09680 Family of unknown function CHR53_07885 PF01047 MarR family CHR53_07895 PF17099 Tryptophan transporter TrpP CHR53_07900 PF01230 HIT domain CHR53_07905 PF00005 ABC transporter CHR53_07910 PF05975 Bacterial ABC transporter protein EcsB CHR53_07915 PF12787 EcsC protein family CHR53_07925 PF03992 Antibiotic biosynthesis monooxygenase CHR53_07930 PF01208 Uroporphyrinogen decarboxylase (URO-D) CHR53_07950 PF12706 Beta-lactamase superfamily domain CHR53_07955 PF10437 Bacterial lipoate protein ligase C-terminus CHR53_07955 PF03099 Biotin/lipoate A/B protein ligase family CHR53_07960 PF00501 AMP-binding enzyme CHR53_07960 PF13193 AMP-binding enzyme C-terminal domain CHR53_07965 PF00378 Enoyl-CoA hydratase/isomerase CHR53_07970 PF16491 CAAX prenyl protease N-terminal, five membrane helices CHR53_07970 PF01435 Peptidase family M48 CHR53_07980 PF06338 ComK protein CHR53_07990 PF03816 Cell envelope-related transcriptional attenuator domain CHR53_07995 PF09335 SNARE associated Golgi protein CHR53_08000 PF10502 Signal peptidase, peptidase S26 CHR53_08005 PF12705 PD-(D/E)XK nuclease superfamily CHR53_08005 PF13361 UvrD-like helicase C-terminal domain CHR53_08010 PF13361 UvrD-like helicase C-terminal domain CHR53_08010 PF00580 UvrD/REP helicase N-terminal domain CHR53_08010 PF12705 PD-(D/E)XK nuclease superfamily CHR53_08015 PF10676 Spore germination protein gerPA/gerPF CHR53_08030 PF10737 Spore germination protein GerPC CHR53_08035 PF10803 Spore germination GerPB CHR53_08045 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHR53_08050 PF07457 Protein of unknown function (DUF1516) CHR53_08070 PF00899 ThiF family CHR53_08080 PF00128 Alpha amylase, catalytic domain CHR53_08080 PF03423 Carbohydrate binding domain (family 25) CHR53_08080 PF01373 Glycosyl hydrolase family 14 CHR53_08090 PF04461 Protein of unknown function (DUF520) CHR53_08095 PF17783 CvfB-like winged helix domain CHR53_08095 PF13509 S1 domain CHR53_08105 PF02645 Uncharacterised protein, DegV family COG1307 CHR53_08110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_08110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_08120 PF12758 Protein of unknown function (DUF3813) CHR53_08130 PF01883 Iron-sulfur cluster assembly protein CHR53_08145 PF00325 Bacterial regulatory proteins, crp family CHR53_08145 PF00027 Cyclic nucleotide-binding domain CHR53_08150 PF06463 Molybdenum Cofactor Synthesis C CHR53_08150 PF04055 Radical SAM superfamily CHR53_08155 PF04405 Domain of Unknown function (DUF542) CHR53_08155 PF01814 Hemerythrin HHE cation binding domain CHR53_08160 PF03453 MoeA N-terminal region (domain I and II) CHR53_08160 PF03454 MoeA C-terminal region (domain IV) CHR53_08160 PF00994 Probable molybdopterin binding domain CHR53_08165 PF03205 Molybdopterin guanine dinucleotide synthesis protein B CHR53_08170 PF14256 YwiC-like protein CHR53_08175 PF00027 Cyclic nucleotide-binding domain CHR53_08175 PF00325 Bacterial regulatory proteins, crp family CHR53_08180 PF14168 YjzC-like protein CHR53_08185 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_08185 PF02861 Clp amino terminal domain, pathogenicity island component CHR53_08185 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_08185 PF17871 AAA lid domain CHR53_08185 PF07724 AAA domain (Cdc48 subfamily) CHR53_08205 PF02608 ABC transporter substrate-binding protein PnrA-like CHR53_08210 PF10815 ComZ CHR53_08220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CHR53_08220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CHR53_08225 PF00109 Beta-ketoacyl synthase, N-terminal domain CHR53_08225 PF02801 Beta-ketoacyl synthase, C-terminal domain CHR53_08230 PF10026 Predicted Zn-dependent protease (DUF2268) CHR53_08235 PF00005 ABC transporter CHR53_08235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_08240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_08240 PF00005 ABC transporter CHR53_08245 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_08250 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_08255 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_08255 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_08260 PF12227 Protein of unknown function (DUF3603) CHR53_08265 PF00579 tRNA synthetases class I (W and Y) CHR53_08270 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_08275 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_08280 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_08280 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_08285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_08285 PF00005 ABC transporter CHR53_08290 PF00005 ABC transporter CHR53_08290 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_08300 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_08300 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_08310 PF03960 ArsC family CHR53_08315 PF05389 Negative regulator of genetic competence (MecA) CHR53_08320 PF13091 PLD-like domain CHR53_08320 PF13396 Phospholipase_D-nuclease N-terminal CHR53_08330 PF08439 Oligopeptidase F CHR53_08330 PF01432 Peptidase family M3 CHR53_08350 PF01152 Bacterial-like globin CHR53_08355 PF01928 CYTH domain CHR53_08365 PF04607 Region found in RelA / SpoT proteins CHR53_08370 PF01513 ATP-NAD kinase CHR53_08375 PF00849 RNA pseudouridylate synthase CHR53_08380 PF00149 Calcineurin-like phosphoesterase CHR53_08385 PF02080 TrkA-C domain CHR53_08385 PF02254 TrkA-N domain CHR53_08385 PF00999 Sodium/hydrogen exchanger family CHR53_08405 PF07098 Protein of unknown function (DUF1360) CHR53_08415 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CHR53_08420 PF07451 Stage V sporulation protein AD (SpoVAD) CHR53_08425 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CHR53_08435 PF14069 Stage VI sporulation protein F CHR53_08440 PF13361 UvrD-like helicase C-terminal domain CHR53_08440 PF00580 UvrD/REP helicase N-terminal domain CHR53_08445 PF13673 Acetyltransferase (GNAT) domain CHR53_08455 PF00756 Putative esterase CHR53_08485 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain CHR53_08485 PF00730 HhH-GPD superfamily base excision DNA repair protein CHR53_08490 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CHR53_08490 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CHR53_08495 PF02627 Carboxymuconolactone decarboxylase family CHR53_08500 PF00248 Aldo/keto reductase family CHR53_08510 PF00266 Aminotransferase class-V CHR53_08515 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_08520 PF00487 Fatty acid desaturase CHR53_08525 PF07730 Histidine kinase CHR53_08530 PF00072 Response regulator receiver domain CHR53_08530 PF00196 Bacterial regulatory proteins, luxR family CHR53_08535 PF08386 TAP-like protein CHR53_08535 PF00561 alpha/beta hydrolase fold CHR53_08560 PF03845 Spore germination protein CHR53_08565 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_08570 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_08575 PF10612 Spore coat protein Z CHR53_08590 PF01434 Peptidase family M41 CHR53_08590 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_08590 PF17862 AAA+ lid domain CHR53_08590 PF06480 FtsH Extracellular CHR53_08595 PF16658 Class II release factor RF3, C-terminal domain CHR53_08595 PF03144 Elongation factor Tu domain 2 CHR53_08595 PF00009 Elongation factor Tu GTP binding domain CHR53_08600 PF04542 Sigma-70 region 2 CHR53_08605 PF12791 Anti-sigma factor N-terminus CHR53_08610 PF00269 Small, acid-soluble spore proteins, alpha/beta type CHR53_08630 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CHR53_08635 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CHR53_08635 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CHR53_08640 PF13426 PAS domain CHR53_08640 PF13188 PAS domain CHR53_08640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_08640 PF00989 PAS fold CHR53_08640 PF00512 His Kinase A (phospho-acceptor) domain CHR53_08645 PF00155 Aminotransferase class I and II CHR53_08650 PF09388 Spo0E like sporulation regulatory protein CHR53_08655 PF01012 Electron transfer flavoprotein domain CHR53_08660 PF01012 Electron transfer flavoprotein domain CHR53_08660 PF00766 Electron transfer flavoprotein FAD-binding domain CHR53_08680 PF07690 Major Facilitator Superfamily CHR53_08685 PF00512 His Kinase A (phospho-acceptor) domain CHR53_08685 PF02743 Cache domain CHR53_08685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_08690 PF01047 MarR family CHR53_08700 PF07724 AAA domain (Cdc48 subfamily) CHR53_08700 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_08700 PF17871 AAA lid domain CHR53_08700 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_08720 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) CHR53_08730 PF04309 Glycerol-3-phosphate responsive antiterminator CHR53_08735 PF00230 Major intrinsic protein CHR53_08740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_08740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_08745 PF01266 FAD dependent oxidoreductase CHR53_08745 PF16901 C-terminal domain of alpha-glycerophosphate oxidase CHR53_08750 PF00381 PTS HPr component phosphorylation site CHR53_08755 PF05524 PEP-utilising enzyme, N-terminal CHR53_08755 PF02896 PEP-utilising enzyme, TIM barrel domain CHR53_08755 PF00391 PEP-utilising enzyme, mobile domain CHR53_08770 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CHR53_08770 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHR53_08780 PF00155 Aminotransferase class I and II CHR53_08785 PF14177 YkyB-like protein CHR53_08790 PF00149 Calcineurin-like phosphoesterase CHR53_08790 PF10518 TAT (twin-arginine translocation) pathway signal sequence CHR53_08795 PF13529 Peptidase_C39 like family CHR53_08800 PF10388 EAL-domain associated signalling protein domain CHR53_08800 PF00563 EAL domain CHR53_08810 PF08796 Protein of unknown function (DUF1797) CHR53_08820 PF07690 Major Facilitator Superfamily CHR53_08825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_08825 PF03466 LysR substrate binding domain CHR53_08830 PF14602 Hexapeptide repeat of succinyl-transferase CHR53_08830 PF00132 Bacterial transferase hexapeptide (six repeats) CHR53_08830 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CHR53_08835 PF01546 Peptidase family M20/M25/M40 CHR53_08835 PF07687 Peptidase dimerisation domain CHR53_08840 PF00578 AhpC/TSA family CHR53_08840 PF10417 C-terminal domain of 1-Cys peroxiredoxin CHR53_08845 PF00578 AhpC/TSA family CHR53_08855 PF02254 TrkA-N domain CHR53_08855 PF02080 TrkA-C domain CHR53_08865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CHR53_08865 PF00753 Metallo-beta-lactamase superfamily CHR53_08865 PF17770 Ribonuclease J C-terminal domain CHR53_08880 PF01327 Polypeptide deformylase CHR53_08890 PF00676 Dehydrogenase E1 component CHR53_08895 PF02780 Transketolase, C-terminal domain CHR53_08895 PF02779 Transketolase, pyrimidine binding domain CHR53_08900 PF00364 Biotin-requiring enzyme CHR53_08900 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHR53_08900 PF02817 e3 binding domain CHR53_08905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHR53_08905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_08930 PF01276 Orn/Lys/Arg decarboxylase, major domain CHR53_08930 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CHR53_08935 PF03060 Nitronate monooxygenase CHR53_08940 PF05256 Uncharacterised protein family (UPF0223) CHR53_08945 PF06335 Protein of unknown function (DUF1054) CHR53_08955 PF00459 Inositol monophosphatase family CHR53_08975 PF14036 YlaH-like protein CHR53_08985 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) CHR53_08995 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CHR53_09000 PF13638 PIN domain CHR53_09000 PF02562 PhoH-like protein CHR53_09010 PF07408 Protein of unknown function (DUF1507) CHR53_09015 PF01098 Cell cycle protein CHR53_09020 PF00289 Biotin carboxylase, N-terminal domain CHR53_09020 PF00364 Biotin-requiring enzyme CHR53_09020 PF00682 HMGL-like CHR53_09020 PF02785 Biotin carboxylase C-terminal domain CHR53_09020 PF02436 Conserved carboxylase domain CHR53_09020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_09025 PF02628 Cytochrome oxidase assembly protein CHR53_09030 PF01040 UbiA prenyltransferase family CHR53_09035 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CHR53_09035 PF00034 Cytochrome c CHR53_09035 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CHR53_09040 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_09045 PF00510 Cytochrome c oxidase subunit III CHR53_09050 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CHR53_09055 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) CHR53_09065 PF08868 YugN-like family CHR53_09070 PF00571 CBS domain CHR53_09075 PF14504 CAP-associated N-terminal CHR53_09075 PF00188 Cysteine-rich secretory protein family CHR53_09085 PF14003 YlbE-like protein CHR53_09095 PF06133 Control of competence regulator ComK, YlbF/YmcA CHR53_09100 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) CHR53_09110 PF01467 Cytidylyltransferase-like CHR53_09115 PF07670 Nucleoside recognition CHR53_09120 PF01734 Patatin-like phospholipase CHR53_09125 PF13180 PDZ domain CHR53_09125 PF05362 Lon protease (S16) C-terminal proteolytic domain CHR53_09130 PF05636 HIGH Nucleotidyl Transferase CHR53_09135 PF02620 Large ribosomal RNA subunit accumulation protein YceD CHR53_09140 PF01783 Ribosomal L32p protein family CHR53_09145 PF00378 Enoyl-CoA hydratase/isomerase CHR53_09155 PF00583 Acetyltransferase (GNAT) family CHR53_09160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_09160 PF00289 Biotin carboxylase, N-terminal domain CHR53_09160 PF02785 Biotin carboxylase C-terminal domain CHR53_09165 PF00364 Biotin-requiring enzyme CHR53_09170 PF01039 Carboxyl transferase domain CHR53_09175 PF02558 Ketopantoate reductase PanE/ApbA CHR53_09175 PF08546 Ketopantoate reductase PanE/ApbA C terminal CHR53_09185 PF10079 Bacillithiol biosynthesis BshC CHR53_09190 PF02381 MraZ protein, putative antitoxin-like CHR53_09195 PF01795 MraW methylase family CHR53_09210 PF03717 Penicillin-binding Protein dimerisation domain CHR53_09210 PF00905 Penicillin binding protein transpeptidase domain CHR53_09210 PF03793 PASTA domain CHR53_09215 PF01225 Mur ligase family, catalytic domain CHR53_09215 PF02875 Mur ligase family, glutamate ligase domain CHR53_09215 PF08245 Mur ligase middle domain CHR53_09225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CHR53_09225 PF00953 Glycosyl transferase family 4 CHR53_09230 PF08245 Mur ligase middle domain CHR53_09230 PF02875 Mur ligase family, glutamate ligase domain CHR53_09235 PF01098 Cell cycle protein CHR53_09240 PF03033 Glycosyltransferase family 28 N-terminal domain CHR53_09240 PF04101 Glycosyltransferase family 28 C-terminal domain CHR53_09245 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CHR53_09245 PF01565 FAD binding domain CHR53_09250 PF08478 POTRA domain, FtsQ-type CHR53_09255 PF05949 Bacterial protein of unknown function (DUF881) CHR53_09260 PF05949 Bacterial protein of unknown function (DUF881) CHR53_09265 PF06947 Protein of unknown function (DUF1290) CHR53_09270 PF02491 SHS2 domain inserted in FTSA CHR53_09275 PF00091 Tubulin/FtsZ family, GTPase domain CHR53_09275 PF12327 FtsZ family, C-terminal domain CHR53_09280 PF03419 Sporulation factor SpoIIGA CHR53_09285 PF04545 Sigma-70, region 4 CHR53_09285 PF04542 Sigma-70 region 2 CHR53_09290 PF04542 Sigma-70 region 2 CHR53_09290 PF04539 Sigma-70 region 3 CHR53_09290 PF04545 Sigma-70, region 4 CHR53_09295 PF05239 PRC-barrel domain CHR53_09305 PF01168 Alanine racemase, N-terminal domain CHR53_09310 PF04472 Cell division protein SepF CHR53_09315 PF02325 YGGT family CHR53_09320 PF17774 Putative RNA-binding domain in YlmH CHR53_09320 PF01479 S4 domain CHR53_09325 PF05103 DivIVA protein CHR53_09330 PF00133 tRNA synthetases class I (I, L, M and V) CHR53_09330 PF08264 Anticodon-binding domain of tRNA CHR53_09330 PF06827 Zinc finger found in FPG and IleRS CHR53_09340 PF01252 Signal peptidase (SPase) II CHR53_09345 PF00849 RNA pseudouridylate synthase CHR53_09345 PF01479 S4 domain CHR53_09350 PF00156 Phosphoribosyl transferase domain CHR53_09355 PF00860 Permease family CHR53_09360 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CHR53_09360 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CHR53_09365 PF01979 Amidohydrolase family CHR53_09370 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CHR53_09370 PF00117 Glutamine amidotransferase class-I CHR53_09375 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CHR53_09375 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_09375 PF02142 MGS-like domain CHR53_09380 PF00970 Oxidoreductase FAD-binding domain CHR53_09380 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CHR53_09385 PF01180 Dihydroorotate dehydrogenase CHR53_09390 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CHR53_09395 PF00156 Phosphoribosyl transferase domain CHR53_09405 PF00689 Cation transporting ATPase, C-terminus CHR53_09405 PF00690 Cation transporter/ATPase, N-terminus CHR53_09410 PF08340 Domain of unknown function (DUF1732) CHR53_09410 PF03755 YicC-like family, N-terminal region CHR53_09415 PF04025 Domain of unknown function (DUF370) CHR53_09420 PF00625 Guanylate kinase CHR53_09425 PF01192 RNA polymerase Rpb6 CHR53_09430 PF04127 DNA / pantothenate metabolism flavoprotein CHR53_09430 PF02441 Flavoprotein CHR53_09435 PF04851 Type III restriction enzyme, res subunit CHR53_09435 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CHR53_09435 PF18074 Primosomal protein N C-terminal domain CHR53_09435 PF00271 Helicase conserved C-terminal domain CHR53_09435 PF17764 3′ DNA-binding domain (3′BD) CHR53_09440 PF01327 Polypeptide deformylase CHR53_09445 PF00551 Formyl transferase CHR53_09445 PF02911 Formyl transferase, C-terminal domain CHR53_09450 PF01189 16S rRNA methyltransferase RsmB/F CHR53_09450 PF01029 NusB family CHR53_09455 PF04055 Radical SAM superfamily CHR53_09465 PF00069 Protein kinase domain CHR53_09465 PF03793 PASTA domain CHR53_09470 PF03193 RsgA GTPase CHR53_09470 PF16745 RsgA N-terminal domain CHR53_09475 PF00834 Ribulose-phosphate 3 epimerase family CHR53_09480 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CHR53_09480 PF04263 Thiamin pyrophosphokinase, catalytic domain CHR53_09485 PF08183 Stage V sporulation protein family CHR53_09490 PF00830 Ribosomal L28 family CHR53_09495 PF03780 Asp23 family, cell envelope-related function CHR53_09500 PF02734 DAK2 domain CHR53_09500 PF13684 Dihydroxyacetone kinase family CHR53_09505 PF03315 Serine dehydratase beta chain CHR53_09505 PF01842 ACT domain CHR53_09510 PF03313 Serine dehydratase alpha chain CHR53_09515 PF00270 DEAD/DEAH box helicase CHR53_09515 PF17191 RecG wedge domain CHR53_09515 PF00271 Helicase conserved C-terminal domain CHR53_09520 PF08279 HTH domain CHR53_09520 PF01575 MaoC like domain CHR53_09525 PF02504 Fatty acid synthesis protein CHR53_09530 PF00698 Acyl transferase domain CHR53_09540 PF00550 Phosphopantetheine attachment site CHR53_09545 PF14622 Ribonuclease-III-like CHR53_09545 PF00035 Double-stranded RNA binding motif CHR53_09550 PF02463 RecF/RecN/SMC N terminal domain CHR53_09550 PF06470 SMC proteins Flexible Hinge Domain CHR53_09555 PF00448 SRP54-type protein, GTPase domain CHR53_09555 PF02881 SRP54-type protein, helical bundle domain CHR53_09560 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CHR53_09565 PF00448 SRP54-type protein, GTPase domain CHR53_09565 PF02978 Signal peptide binding domain CHR53_09565 PF02881 SRP54-type protein, helical bundle domain CHR53_09570 PF00886 Ribosomal protein S16 CHR53_09580 PF11068 YlqD protein CHR53_09585 PF05239 PRC-barrel domain CHR53_09585 PF01782 RimM N-terminal domain CHR53_09590 PF01746 tRNA (Guanine-1)-methyltransferase CHR53_09595 PF01245 Ribosomal protein L19 CHR53_09600 PF10502 Signal peptidase, peptidase S26 CHR53_09605 PF01926 50S ribosome-binding GTPase CHR53_09610 PF01351 Ribonuclease HII CHR53_09615 PF00549 CoA-ligase CHR53_09615 PF08442 ATP-grasp domain CHR53_09620 PF00549 CoA-ligase CHR53_09620 PF02629 CoA binding domain CHR53_09625 PF02481 DNA recombination-mediator protein A CHR53_09635 PF01396 Topoisomerase DNA binding C4 zinc finger CHR53_09635 PF01751 Toprim domain CHR53_09635 PF01131 DNA topoisomerase CHR53_09640 PF01134 Glucose inhibited division protein A CHR53_09645 PF00227 Proteasome subunit CHR53_09650 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_09650 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_09650 PF07724 AAA domain (Cdc48 subfamily) CHR53_09655 PF08222 CodY helix-turn-helix domain CHR53_09655 PF06018 CodY GAF-like domain CHR53_09660 PF00318 Ribosomal protein S2 CHR53_09665 PF00889 Elongation factor TS CHR53_09670 PF00696 Amino acid kinase family CHR53_09675 PF01765 Ribosome recycling factor CHR53_09680 PF01255 Putative undecaprenyl diphosphate synthase CHR53_09690 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CHR53_09690 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CHR53_09690 PF13288 DXP reductoisomerase C-terminal domain CHR53_09695 PF13180 PDZ domain CHR53_09695 PF02163 Peptidase family M50 CHR53_09700 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHR53_09700 PF11490 DNA polymerase III polC-type N-terminus II CHR53_09700 PF00929 Exonuclease CHR53_09700 PF02811 PHP domain CHR53_09700 PF14480 DNA polymerase III polC-type N-terminus I CHR53_09700 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHR53_09700 PF14579 Helix-hairpin-helix motif CHR53_09705 PF17384 RimP C-terminal SH3 domain CHR53_09705 PF02576 RimP N-terminal domain CHR53_09710 PF13184 NusA-like KH domain CHR53_09710 PF08529 NusA N-terminal domain CHR53_09710 PF00575 S1 RNA binding domain CHR53_09715 PF04296 Protein of unknown function (DUF448) CHR53_09720 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CHR53_09725 PF04760 Translation initiation factor IF-2, N-terminal region CHR53_09725 PF00009 Elongation factor Tu GTP binding domain CHR53_09725 PF11987 Translation-initiation factor 2 CHR53_09730 PF04456 Protein of unknown function (DUF503) CHR53_09735 PF02033 Ribosome-binding factor A CHR53_09740 PF16198 tRNA pseudouridylate synthase B C-terminal domain CHR53_09740 PF01509 TruB family pseudouridylate synthase (N terminal domain) CHR53_09745 PF06574 FAD synthetase CHR53_09745 PF01687 Riboflavin kinase CHR53_09750 PF00312 Ribosomal protein S15 CHR53_09755 PF00013 KH domain CHR53_09755 PF03725 3' exoribonuclease family, domain 2 CHR53_09755 PF00575 S1 RNA binding domain CHR53_09755 PF01138 3' exoribonuclease family, domain 1 CHR53_09755 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CHR53_09760 PF01522 Polysaccharide deacetylase CHR53_09765 PF05193 Peptidase M16 inactive domain CHR53_09765 PF00675 Insulinase (Peptidase family M16) CHR53_09770 PF05239 PRC-barrel domain CHR53_09775 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_09775 PF16924 Dipicolinate synthase subunit A N-terminal domain CHR53_09780 PF02441 Flavoprotein CHR53_09785 PF01118 Semialdehyde dehydrogenase, NAD binding domain CHR53_09785 PF02774 Semialdehyde dehydrogenase, dimerisation domain CHR53_09790 PF13840 ACT domain CHR53_09790 PF00696 Amino acid kinase family CHR53_09795 PF00701 Dihydrodipicolinate synthetase family CHR53_09800 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CHR53_09800 PF00753 Metallo-beta-lactamase superfamily CHR53_09800 PF17770 Ribonuclease J C-terminal domain CHR53_09805 PF00574 Clp protease CHR53_09810 PF14035 YlzJ-like protein CHR53_09815 PF01580 FtsK/SpoIIIE family CHR53_09815 PF17854 FtsK alpha domain CHR53_09815 PF09397 Ftsk gamma domain CHR53_09820 PF07702 UTRA domain CHR53_09820 PF00392 Bacterial regulatory proteins, gntR family CHR53_09845 PF05193 Peptidase M16 inactive domain CHR53_09850 PF05193 Peptidase M16 inactive domain CHR53_09850 PF00675 Insulinase (Peptidase family M16) CHR53_09860 PF11588 Protein of unknown function (DUF3243) CHR53_09865 PF11868 Protein of unknown function (DUF3388) CHR53_09870 PF13464 Domain of unknown function (DUF4115) CHR53_09875 PF01066 CDP-alcohol phosphatidyltransferase CHR53_09880 PF18146 Damage-inducible protein CinA KH domain CHR53_09880 PF02464 Competence-damaged protein CHR53_09880 PF00994 Probable molybdopterin binding domain CHR53_09885 PF00154 recA bacterial DNA recombination protein CHR53_09890 PF01348 Type II intron maturase CHR53_09890 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHR53_09895 PF00154 recA bacterial DNA recombination protein CHR53_09905 PF12072 Domain of unknown function (DUF3552) CHR53_09905 PF00013 KH domain CHR53_09905 PF01966 HD domain CHR53_09910 PF13277 YmdB-like protein CHR53_09915 PF04232 Stage V sporulation protein S (SpoVS) CHR53_09920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CHR53_09920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CHR53_09920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CHR53_09925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_09930 PF04055 Radical SAM superfamily CHR53_09930 PF00919 Uncharacterized protein family UPF0004 CHR53_09930 PF01938 TRAM domain CHR53_09935 PF06133 Control of competence regulator ComK, YlbF/YmcA CHR53_09940 PF10628 Outer spore coat protein E (CotE) CHR53_09950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_09950 PF03466 LysR substrate binding domain CHR53_09955 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CHR53_09955 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CHR53_09960 PF01613 Flavin reductase like domain CHR53_09965 PF01687 Riboflavin kinase CHR53_09965 PF06574 FAD synthetase CHR53_09970 PF00701 Dihydrodipicolinate synthetase family CHR53_09975 PF00171 Aldehyde dehydrogenase family CHR53_09980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_09990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_09995 PF06445 GyrI-like small molecule binding domain CHR53_09995 PF13411 MerR HTH family regulatory protein CHR53_10000 PF00171 Aldehyde dehydrogenase family CHR53_10005 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHR53_10010 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHR53_10015 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase CHR53_10025 PF00067 Cytochrome P450 CHR53_10035 PF02653 Branched-chain amino acid transport system / permease component CHR53_10045 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_10045 PF00005 ABC transporter CHR53_10050 PF00005 ABC transporter CHR53_10060 PF00848 Ring hydroxylating alpha subunit (catalytic domain) CHR53_10060 PF00355 Rieske [2Fe-2S] domain CHR53_10065 PF00866 Ring hydroxylating beta subunit CHR53_10070 PF12706 Beta-lactamase superfamily domain CHR53_10075 PF12706 Beta-lactamase superfamily domain CHR53_10080 PF07690 Major Facilitator Superfamily CHR53_10085 PF00171 Aldehyde dehydrogenase family CHR53_10090 PF00202 Aminotransferase class-III CHR53_10095 PF13520 Amino acid permease CHR53_10100 PF12706 Beta-lactamase superfamily domain CHR53_10105 PF01325 Iron dependent repressor, N-terminal DNA binding domain CHR53_10105 PF00480 ROK family CHR53_10110 PF02417 Chromate transporter CHR53_10115 PF02417 Chromate transporter CHR53_10120 PF13302 Acetyltransferase (GNAT) domain CHR53_10125 PF01613 Flavin reductase like domain CHR53_10130 PF00158 Sigma-54 interaction domain CHR53_10130 PF13426 PAS domain CHR53_10130 PF02954 Bacterial regulatory protein, Fis family CHR53_10135 PF01175 Urocanase Rossmann-like domain CHR53_10135 PF17391 Urocanase N-terminal domain CHR53_10135 PF17392 Urocanase C-terminal domain CHR53_10145 PF01979 Amidohydrolase family CHR53_10150 PF07687 Peptidase dimerisation domain CHR53_10150 PF01546 Peptidase family M20/M25/M40 CHR53_10155 PF13726 Na+-H+ antiporter family CHR53_10155 PF03553 Na+/H+ antiporter family CHR53_10160 PF00221 Aromatic amino acid lyase CHR53_10165 PF00005 ABC transporter CHR53_10170 PF01810 LysE type translocator CHR53_10175 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CHR53_10175 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CHR53_10210 PF07690 Major Facilitator Superfamily CHR53_10215 PF07739 TipAS antibiotic-recognition domain CHR53_10215 PF13411 MerR HTH family regulatory protein CHR53_10240 PF00155 Aminotransferase class I and II CHR53_10240 PF00392 Bacterial regulatory proteins, gntR family CHR53_10250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHR53_10250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_10265 PF02583 Metal-sensitive transcriptional repressor CHR53_10270 PF13686 DsrE/DsrF/DrsH-like family CHR53_10280 PF01206 Sulfurtransferase TusA CHR53_10280 PF00581 Rhodanese-like domain CHR53_10285 PF00753 Metallo-beta-lactamase superfamily CHR53_10285 PF00581 Rhodanese-like domain CHR53_10290 PF01206 Sulfurtransferase TusA CHR53_10310 PF07563 Protein of unknown function (DUF1541) CHR53_10315 PF16736 Single Cache-like CHR53_10315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_10315 PF00989 PAS fold CHR53_10315 PF00512 His Kinase A (phospho-acceptor) domain CHR53_10320 PF00072 Response regulator receiver domain CHR53_10320 PF00486 Transcriptional regulatory protein, C terminal CHR53_10330 PF02627 Carboxymuconolactone decarboxylase family CHR53_10335 PF16242 Pyridoxamine 5'-phosphate oxidase like CHR53_10340 PF04070 Domain of unknown function (DUF378) CHR53_10345 PF02225 PA domain CHR53_10345 PF13860 FlgD Ig-like domain CHR53_10345 PF00082 Subtilase family CHR53_10345 PF05922 Peptidase inhibitor I9 CHR53_10360 PF09529 Integral membrane protein (intg_mem_TP0381) CHR53_10365 PF05190 MutS family domain IV CHR53_10365 PF05192 MutS domain III CHR53_10365 PF01624 MutS domain I CHR53_10365 PF00488 MutS domain V CHR53_10365 PF05188 MutS domain II CHR53_10370 PF08676 MutL C terminal dimerisation domain CHR53_10370 PF01119 DNA mismatch repair protein, C-terminal domain CHR53_10385 PF17209 Hfq protein CHR53_10390 PF17866 AAA lid domain CHR53_10390 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_10395 PF16360 GTP-binding GTPase Middle Region CHR53_10395 PF13167 GTP-binding GTPase N-terminal CHR53_10395 PF01926 50S ribosome-binding GTPase CHR53_10400 PF06838 Methionine gamma-lyase CHR53_10405 PF13411 MerR HTH family regulatory protein CHR53_10410 PF03951 Glutamine synthetase, beta-Grasp domain CHR53_10410 PF00120 Glutamine synthetase, catalytic domain CHR53_10415 PF14074 Protein of unknown function (DUF4257) CHR53_10420 PF00717 Peptidase S24-like CHR53_10420 PF01726 LexA DNA binding domain CHR53_10425 PF01476 LysM domain CHR53_10430 PF00239 Resolvase, N terminal domain CHR53_10435 PF05979 Bacterial protein of unknown function (DUF896) CHR53_10440 PF02779 Transketolase, pyrimidine binding domain CHR53_10440 PF00456 Transketolase, thiamine diphosphate binding domain CHR53_10440 PF02780 Transketolase, C-terminal domain CHR53_10445 PF10747 Sporulation inhibitor of replication protein SirA CHR53_10450 PF03672 Uncharacterised protein family (UPF0154) CHR53_10455 PF00664 ABC transporter transmembrane region CHR53_10455 PF00005 ABC transporter CHR53_10460 PF00005 ABC transporter CHR53_10460 PF00664 ABC transporter transmembrane region CHR53_10470 PF02683 Cytochrome C biogenesis protein transmembrane region CHR53_10475 PF07301 Protein of unknown function (DUF1453) CHR53_10480 PF11084 Protein of unknown function (DUF2621) CHR53_10485 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_10485 PF00589 Phage integrase family CHR53_10490 PF02151 UvrB/uvrC motif CHR53_10490 PF08459 UvrC Helix-hairpin-helix N-terminal CHR53_10490 PF01541 GIY-YIG catalytic domain CHR53_10490 PF12826 Helix-hairpin-helix motif CHR53_10540 PF02796 Helix-turn-helix domain of resolvase CHR53_10540 PF00239 Resolvase, N terminal domain CHR53_10565 PF09557 Domain of unknown function (DUF2382) CHR53_10565 PF11181 Heat induced stress protein YflT CHR53_10570 PF01012 Electron transfer flavoprotein domain CHR53_10575 PF00766 Electron transfer flavoprotein FAD-binding domain CHR53_10575 PF01012 Electron transfer flavoprotein domain CHR53_10585 PF01546 Peptidase family M20/M25/M40 CHR53_10585 PF07687 Peptidase dimerisation domain CHR53_10590 PF00512 His Kinase A (phospho-acceptor) domain CHR53_10590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_10610 PF00999 Sodium/hydrogen exchanger family CHR53_10630 PF10942 Protein of unknown function (DUF2619) CHR53_10640 PF07690 Major Facilitator Superfamily CHR53_10655 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_10660 PF00512 His Kinase A (phospho-acceptor) domain CHR53_10660 PF00989 PAS fold CHR53_10660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_10660 PF08447 PAS fold CHR53_10670 PF00183 Hsp90 protein CHR53_10675 PF00753 Metallo-beta-lactamase superfamily CHR53_10680 PF00248 Aldo/keto reductase family CHR53_10685 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_10685 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_10690 PF07690 Major Facilitator Superfamily CHR53_10700 PF01047 MarR family CHR53_10705 PF10415 Fumarase C C-terminus CHR53_10705 PF00206 Lyase CHR53_10715 PF04294 VanW like protein CHR53_10725 PF03551 Transcriptional regulator PadR-like family CHR53_10745 PF00916 Sulfate permease family CHR53_10745 PF01740 STAS domain CHR53_10755 PF00313 'Cold-shock' DNA-binding domain CHR53_10760 PF00149 Calcineurin-like phosphoesterase CHR53_10760 PF12320 Type 5 capsule protein repressor C-terminal domain CHR53_10765 PF13476 AAA domain CHR53_10770 PF00890 FAD binding domain CHR53_10775 PF12464 Maltose acetyltransferase CHR53_10775 PF14602 Hexapeptide repeat of succinyl-transferase CHR53_10785 PF03167 Uracil DNA glycosylase superfamily CHR53_10790 PF00300 Histidine phosphatase superfamily (branch 1) CHR53_10795 PF07690 Major Facilitator Superfamily CHR53_10810 PF01566 Natural resistance-associated macrophage protein CHR53_10815 PF01380 SIS domain CHR53_10820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CHR53_10825 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CHR53_10825 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CHR53_10830 PF00342 Phosphoglucose isomerase CHR53_10835 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHR53_10835 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CHR53_10845 PF00155 Aminotransferase class I and II CHR53_10850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_10850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_10855 PF00221 Aromatic amino acid lyase CHR53_10865 PF12833 Helix-turn-helix domain CHR53_10870 PF13726 Na+-H+ antiporter family CHR53_10870 PF03553 Na+/H+ antiporter family CHR53_10875 PF01638 HxlR-like helix-turn-helix CHR53_10880 PF03144 Elongation factor Tu domain 2 CHR53_10880 PF09105 Elongation factor SelB, winged helix CHR53_10880 PF09106 Elongation factor SelB, winged helix CHR53_10880 PF00009 Elongation factor Tu GTP binding domain CHR53_10880 PF09107 Elongation factor SelB, winged helix CHR53_10885 PF02342 TerD domain CHR53_10890 PF04951 D-aminopeptidase CHR53_10895 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_10900 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_10900 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_10905 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_10905 PF00005 ABC transporter CHR53_10910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_10915 PF17676 LD-carboxypeptidase C-terminal domain CHR53_10915 PF02016 LD-carboxypeptidase N-terminal domain CHR53_10920 PF13378 Enolase C-terminal domain-like CHR53_10920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_10925 PF00877 NlpC/P60 family CHR53_10930 PF00005 ABC transporter CHR53_10930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_10940 PF01235 Sodium:alanine symporter family CHR53_10945 PF03176 MMPL family CHR53_10950 PF01047 MarR family CHR53_10960 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHR53_10960 PF09180 Prolyl-tRNA synthetase, C-terminal CHR53_10960 PF03129 Anticodon binding domain CHR53_10970 PF00970 Oxidoreductase FAD-binding domain CHR53_10970 PF00042 Globin CHR53_10970 PF00175 Oxidoreductase NAD-binding domain CHR53_10980 PF00005 ABC transporter CHR53_10985 PF12679 ABC-2 family transporter protein CHR53_10995 PF02416 mttA/Hcf106 family CHR53_11000 PF04914 DltD protein CHR53_11005 PF00550 Phosphopantetheine attachment site CHR53_11010 PF03062 MBOAT, membrane-bound O-acyltransferase family CHR53_11015 PF13193 AMP-binding enzyme C-terminal domain CHR53_11015 PF00501 AMP-binding enzyme CHR53_11025 PF05343 M42 glutamyl aminopeptidase CHR53_11035 PF01544 CorA-like Mg2+ transporter protein CHR53_11040 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_11060 PF09335 SNARE associated Golgi protein CHR53_11070 PF07690 Major Facilitator Superfamily CHR53_11075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHR53_11075 PF01799 [2Fe-2S] binding domain CHR53_11075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHR53_11075 PF00111 2Fe-2S iron-sulfur cluster binding domain CHR53_11085 PF01799 [2Fe-2S] binding domain CHR53_11085 PF00111 2Fe-2S iron-sulfur cluster binding domain CHR53_11100 PF01799 [2Fe-2S] binding domain CHR53_11100 PF00111 2Fe-2S iron-sulfur cluster binding domain CHR53_11110 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHR53_11110 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHR53_11115 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CHR53_11120 PF03741 Integral membrane protein TerC family CHR53_11125 PF18698 Histidine kinase sensor domain CHR53_11125 PF00989 PAS fold CHR53_11125 PF00512 His Kinase A (phospho-acceptor) domain CHR53_11125 PF00672 HAMP domain CHR53_11125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11130 PF00072 Response regulator receiver domain CHR53_11130 PF00486 Transcriptional regulatory protein, C terminal CHR53_11135 PF01569 PAP2 superfamily CHR53_11140 PF01066 CDP-alcohol phosphatidyltransferase CHR53_11145 PF00005 ABC transporter CHR53_11145 PF00664 ABC transporter transmembrane region CHR53_11155 PF00199 Catalase CHR53_11155 PF06628 Catalase-related immune-responsive CHR53_11165 PF00106 short chain dehydrogenase CHR53_11170 PF09587 Bacterial capsule synthesis protein PGA_cap CHR53_11180 PF01872 RibD C-terminal domain CHR53_11180 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_11185 PF00677 Lumazine binding domain CHR53_11190 PF00925 GTP cyclohydrolase II CHR53_11190 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CHR53_11195 PF00885 6,7-dimethyl-8-ribityllumazine synthase CHR53_11200 PF01497 Periplasmic binding protein CHR53_11205 PF01032 FecCD transport family CHR53_11210 PF00005 ABC transporter CHR53_11215 PF03186 CobD/Cbib protein CHR53_11225 PF07685 CobB/CobQ-like glutamine amidotransferase domain CHR53_11230 PF02654 Cobalamin-5-phosphate synthase CHR53_11245 PF01923 Cobalamin adenosyltransferase CHR53_11260 PF00905 Penicillin binding protein transpeptidase domain CHR53_11260 PF00912 Transglycosylase CHR53_11270 PF00005 ABC transporter CHR53_11275 PF12704 MacB-like periplasmic core domain CHR53_11275 PF02687 FtsX-like permease family CHR53_11295 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_11300 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_11305 PF03845 Spore germination protein CHR53_11310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11310 PF13188 PAS domain CHR53_11310 PF00989 PAS fold CHR53_11310 PF00512 His Kinase A (phospho-acceptor) domain CHR53_11310 PF13426 PAS domain CHR53_11315 PF00583 Acetyltransferase (GNAT) family CHR53_11320 PF14139 YpzG-like protein CHR53_11335 PF17954 Quercetinase C-terminal cupin domain CHR53_11335 PF02678 Pirin CHR53_11340 PF03352 Methyladenine glycosylase CHR53_11350 PF04607 Region found in RelA / SpoT proteins CHR53_11360 PF11700 Vacuole effluxer Atg22 like CHR53_11370 PF02559 CarD-like/TRCF domain CHR53_11375 PF00206 Lyase CHR53_11375 PF02655 ATP-grasp domain CHR53_11390 PF17391 Urocanase N-terminal domain CHR53_11390 PF01175 Urocanase Rossmann-like domain CHR53_11390 PF17392 Urocanase C-terminal domain CHR53_11395 PF01979 Amidohydrolase family CHR53_11425 PF00483 Nucleotidyl transferase CHR53_11430 PF00462 Glutaredoxin CHR53_11435 PF04389 Peptidase family M28 CHR53_11445 PF02110 Hydroxyethylthiazole kinase family CHR53_11450 PF08543 Phosphomethylpyrimidine kinase CHR53_11455 PF02581 Thiamine monophosphate synthase CHR53_11465 PF07687 Peptidase dimerisation domain CHR53_11465 PF01546 Peptidase family M20/M25/M40 CHR53_11470 PF03070 TENA/THI-4/PQQC family CHR53_11475 PF00005 ABC transporter CHR53_11480 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_11485 PF09084 NMT1/THI5 like CHR53_11490 PF00375 Sodium:dicarboxylate symporter family CHR53_11495 PF00072 Response regulator receiver domain CHR53_11495 PF04703 FaeA-like protein CHR53_11500 PF00989 PAS fold CHR53_11500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11500 PF17203 Single cache domain 3 CHR53_11500 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CHR53_11530 PF01554 MatE CHR53_11555 PF01370 NAD dependent epimerase/dehydratase family CHR53_11565 PF00534 Glycosyl transferases group 1 CHR53_11565 PF13439 Glycosyltransferase Family 4 CHR53_11570 PF00501 AMP-binding enzyme CHR53_11570 PF13193 AMP-binding enzyme C-terminal domain CHR53_11595 PF02687 FtsX-like permease family CHR53_11600 PF00005 ABC transporter CHR53_11605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11610 PF00486 Transcriptional regulatory protein, C terminal CHR53_11610 PF00072 Response regulator receiver domain CHR53_11615 PF02554 Carbon starvation protein CstA CHR53_11620 PF00072 Response regulator receiver domain CHR53_11620 PF04397 LytTr DNA-binding domain CHR53_11625 PF06580 Histidine kinase CHR53_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11625 PF07694 5TMR of 5TMR-LYT CHR53_11625 PF13492 GAF domain CHR53_11640 PF00266 Aminotransferase class-V CHR53_11655 PF08439 Oligopeptidase F CHR53_11655 PF01432 Peptidase family M3 CHR53_11660 PF14824 Sirohaem biosynthesis protein central CHR53_11675 PF01507 Phosphoadenosine phosphosulfate reductase family CHR53_11680 PF01384 Phosphate transporter family CHR53_11685 PF14306 PUA-like domain CHR53_11685 PF01747 ATP-sulfurylase CHR53_11695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CHR53_11700 PF01903 CbiX CHR53_11705 PF00175 Oxidoreductase NAD-binding domain CHR53_11705 PF00667 FAD binding domain CHR53_11705 PF00258 Flavodoxin CHR53_11710 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CHR53_11710 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CHR53_11715 PF01979 Amidohydrolase family CHR53_11720 PF01738 Dienelactone hydrolase family CHR53_11725 PF12787 EcsC protein family CHR53_11730 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CHR53_11730 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CHR53_11740 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like CHR53_11745 PF00226 DnaJ domain CHR53_11745 PF01556 DnaJ C terminal domain CHR53_11745 PF00684 DnaJ central domain CHR53_11750 PF01212 Beta-eliminating lyase CHR53_11755 PF00082 Subtilase family CHR53_11760 PF01066 CDP-alcohol phosphatidyltransferase CHR53_11765 PF04960 Glutaminase CHR53_11785 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CHR53_11785 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CHR53_11810 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_11820 PF09501 Probable sporulation protein (Bac_small_yrzI) CHR53_11825 PF00561 alpha/beta hydrolase fold CHR53_11830 PF01569 PAP2 superfamily CHR53_11840 PF05525 Branched-chain amino acid transport protein CHR53_11845 PF09962 Uncharacterized conserved protein (DUF2196) CHR53_11875 PF00561 alpha/beta hydrolase fold CHR53_11880 PF01476 LysM domain CHR53_11880 PF00877 NlpC/P60 family CHR53_11910 PF01022 Bacterial regulatory protein, arsR family CHR53_11925 PF00144 Beta-lactamase CHR53_11940 PF00486 Transcriptional regulatory protein, C terminal CHR53_11940 PF00072 Response regulator receiver domain CHR53_11945 PF00672 HAMP domain CHR53_11945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_11945 PF00512 His Kinase A (phospho-acceptor) domain CHR53_11950 PF05163 DinB family CHR53_11955 PF00293 NUDIX domain CHR53_11960 PF00857 Isochorismatase family CHR53_11965 PF01037 Lrp/AsnC ligand binding domain CHR53_11970 PF01872 RibD C-terminal domain CHR53_11990 PF02222 ATP-grasp domain CHR53_11995 PF11588 Protein of unknown function (DUF3243) CHR53_12000 PF01425 Amidase CHR53_12015 PF00580 UvrD/REP helicase N-terminal domain CHR53_12015 PF13361 UvrD-like helicase C-terminal domain CHR53_12025 PF13426 PAS domain CHR53_12025 PF00672 HAMP domain CHR53_12025 PF00512 His Kinase A (phospho-acceptor) domain CHR53_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12025 PF13426 PAS domain CHR53_12025 PF00512 His Kinase A (phospho-acceptor) domain CHR53_12025 PF00672 HAMP domain CHR53_12025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12030 PF00486 Transcriptional regulatory protein, C terminal CHR53_12030 PF00072 Response regulator receiver domain CHR53_12065 PF00664 ABC transporter transmembrane region CHR53_12065 PF00005 ABC transporter CHR53_12070 PF00082 Subtilase family CHR53_12135 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CHR53_12140 PF04101 Glycosyltransferase family 28 C-terminal domain CHR53_12140 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CHR53_12145 PF01522 Polysaccharide deacetylase CHR53_12150 PF01569 PAP2 superfamily CHR53_12155 PF00486 Transcriptional regulatory protein, C terminal CHR53_12155 PF00072 Response regulator receiver domain CHR53_12160 PF00512 His Kinase A (phospho-acceptor) domain CHR53_12160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12160 PF00672 HAMP domain CHR53_12165 PF09335 SNARE associated Golgi protein CHR53_12185 PF07486 Cell Wall Hydrolase CHR53_12190 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CHR53_12190 PF00391 PEP-utilising enzyme, mobile domain CHR53_12205 PF00583 Acetyltransferase (GNAT) family CHR53_12235 PF00457 Glycosyl hydrolases family 11 CHR53_12235 PF01522 Polysaccharide deacetylase CHR53_12235 PF03422 Carbohydrate binding module (family 6) CHR53_12240 PF00877 NlpC/P60 family CHR53_12245 PF00679 Elongation factor G C-terminus CHR53_12245 PF14492 Elongation Factor G, domain II CHR53_12245 PF00009 Elongation factor Tu GTP binding domain CHR53_12245 PF03764 Elongation factor G, domain IV CHR53_12250 PF03741 Integral membrane protein TerC family CHR53_12255 PF00375 Sodium:dicarboxylate symporter family CHR53_12260 PF09339 IclR helix-turn-helix domain CHR53_12260 PF01614 Bacterial transcriptional regulator CHR53_12265 PF00171 Aldehyde dehydrogenase family CHR53_12275 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHR53_12280 PF03812 2-keto-3-deoxygluconate permease CHR53_12285 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CHR53_12285 PF08666 SAF domain CHR53_12295 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CHR53_12295 PF08666 SAF domain CHR53_12300 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_12305 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CHR53_12310 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CHR53_12315 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_12315 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_12315 PF01842 ACT domain CHR53_12320 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_12330 PF00920 Dehydratase family CHR53_12335 PF09339 IclR helix-turn-helix domain CHR53_12335 PF01614 Bacterial transcriptional regulator CHR53_12345 PF00701 Dihydrodipicolinate synthetase family CHR53_12360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_12375 PF01381 Helix-turn-helix CHR53_12390 PF00583 Acetyltransferase (GNAT) family CHR53_12415 PF04389 Peptidase family M28 CHR53_12415 PF02225 PA domain CHR53_12420 PF04389 Peptidase family M28 CHR53_12420 PF02225 PA domain CHR53_12425 PF00990 Diguanylate cyclase, GGDEF domain CHR53_12430 PF00072 Response regulator receiver domain CHR53_12435 PF01521 Iron-sulphur cluster biosynthesis CHR53_12440 PF00535 Glycosyl transferase family 2 CHR53_12445 PF02690 Na+/Pi-cotransporter CHR53_12455 PF00561 alpha/beta hydrolase fold CHR53_12460 PF07690 Major Facilitator Superfamily CHR53_12465 PF08402 TOBE domain CHR53_12465 PF00005 ABC transporter CHR53_12470 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_12475 PF01547 Bacterial extracellular solute-binding protein CHR53_12480 PF00005 ABC transporter CHR53_12485 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_12495 PF02630 SCO1/SenC CHR53_12500 PF08281 Sigma-70, region 4 CHR53_12500 PF04542 Sigma-70 region 2 CHR53_12515 PF00132 Bacterial transferase hexapeptide (six repeats) CHR53_12520 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_12520 PF00585 C-terminal regulatory domain of Threonine dehydratase CHR53_12530 PF01709 Transcriptional regulator CHR53_12535 PF00892 EamA-like transporter family CHR53_12540 PF04073 Aminoacyl-tRNA editing domain CHR53_12555 PF03737 Aldolase/RraA CHR53_12560 PF02586 SOS response associated peptidase (SRAP) CHR53_12565 PF07702 UTRA domain CHR53_12565 PF00392 Bacterial regulatory proteins, gntR family CHR53_12570 PF16657 Maltogenic Amylase, C-terminal domain CHR53_12570 PF00128 Alpha amylase, catalytic domain CHR53_12575 PF02378 Phosphotransferase system, EIIC CHR53_12575 PF00367 phosphotransferase system, EIIB CHR53_12580 PF03741 Integral membrane protein TerC family CHR53_12595 PF04134 Protein of unknown function, DUF393 CHR53_12605 PF03060 Nitronate monooxygenase CHR53_12615 PF00005 ABC transporter CHR53_12620 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_12625 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_12660 PF01206 Sulfurtransferase TusA CHR53_12660 PF00581 Rhodanese-like domain CHR53_12665 PF00581 Rhodanese-like domain CHR53_12665 PF00753 Metallo-beta-lactamase superfamily CHR53_12670 PF01925 Sulfite exporter TauE/SafE CHR53_12675 PF13686 DsrE/DsrF/DrsH-like family CHR53_12690 PF00578 AhpC/TSA family CHR53_12695 PF00486 Transcriptional regulatory protein, C terminal CHR53_12695 PF00072 Response regulator receiver domain CHR53_12710 PF07690 Major Facilitator Superfamily CHR53_12715 PF00005 ABC transporter CHR53_12715 PF12848 ABC transporter CHR53_12730 PF00860 Permease family CHR53_12735 PF00156 Phosphoribosyl transferase domain CHR53_12745 PF00155 Aminotransferase class I and II CHR53_12750 PF01370 NAD dependent epimerase/dehydratase family CHR53_12770 PF03841 L-seryl-tRNA selenium transferase CHR53_12770 PF12390 Selenocysteine synthase N terminal CHR53_12775 PF08179 Small acid-soluble spore protein P family CHR53_12790 PF00330 Aconitase family (aconitate hydratase) CHR53_12790 PF00694 Aconitase C-terminal domain CHR53_12795 PF00578 AhpC/TSA family CHR53_12800 PF13040 Fur-regulated basic protein B CHR53_12805 PF08177 Small acid-soluble spore protein N family CHR53_12815 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_12815 PF17866 AAA lid domain CHR53_12820 PF03061 Thioesterase superfamily CHR53_12830 PF02660 Glycerol-3-phosphate acyltransferase CHR53_12835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12835 PF00989 PAS fold CHR53_12835 PF00512 His Kinase A (phospho-acceptor) domain CHR53_12840 PF13380 CoA binding domain CHR53_12845 PF00986 DNA gyrase B subunit, carboxyl terminus CHR53_12845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12845 PF00204 DNA gyrase B CHR53_12845 PF01751 Toprim domain CHR53_12850 PF03989 DNA gyrase C-terminal domain, beta-propeller CHR53_12850 PF00521 DNA gyrase/topoisomerase IV, subunit A CHR53_12865 PF00005 ABC transporter CHR53_12865 PF00664 ABC transporter transmembrane region CHR53_12870 PF00005 ABC transporter CHR53_12870 PF00664 ABC transporter transmembrane region CHR53_12875 PF00486 Transcriptional regulatory protein, C terminal CHR53_12875 PF00072 Response regulator receiver domain CHR53_12880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_12885 PF00005 ABC transporter CHR53_12890 PF02687 FtsX-like permease family CHR53_12895 PF13382 Adenine deaminase C-terminal domain CHR53_12895 PF01979 Amidohydrolase family CHR53_12900 PF00860 Permease family CHR53_12910 PF02625 XdhC and CoxI family CHR53_12910 PF13478 XdhC Rossmann domain CHR53_12915 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHR53_12915 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHR53_12920 PF00941 FAD binding domain in molybdopterin dehydrogenase CHR53_12920 PF03450 CO dehydrogenase flavoprotein C-terminal domain CHR53_12925 PF00132 Bacterial transferase hexapeptide (six repeats) CHR53_12925 PF00483 Nucleotidyl transferase CHR53_12930 PF01799 [2Fe-2S] binding domain CHR53_12930 PF00111 2Fe-2S iron-sulfur cluster binding domain CHR53_12940 PF00860 Permease family CHR53_12945 PF01979 Amidohydrolase family CHR53_12955 PF02441 Flavoprotein CHR53_12960 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase CHR53_12965 PF00936 BMC domain CHR53_12980 PF00936 BMC domain CHR53_12990 PF03319 Ethanolamine utilisation protein EutN/carboxysome CHR53_12995 PF13382 Adenine deaminase C-terminal domain CHR53_12995 PF01979 Amidohydrolase family CHR53_13000 PF04199 Putative cyclase CHR53_13005 PF09347 Domain of unknown function (DUF1989) CHR53_13010 PF07687 Peptidase dimerisation domain CHR53_13010 PF01546 Peptidase family M20/M25/M40 CHR53_13015 PF01979 Amidohydrolase family CHR53_13020 PF13495 Phage integrase, N-terminal SAM-like domain CHR53_13020 PF00589 Phage integrase family CHR53_13035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHR53_13035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHR53_13045 PF07969 Amidohydrolase family CHR53_13050 PF07969 Amidohydrolase family CHR53_13060 PF02633 Creatinine amidohydrolase CHR53_13070 PF00171 Aldehyde dehydrogenase family CHR53_13075 PF07729 FCD domain CHR53_13075 PF00392 Bacterial regulatory proteins, gntR family CHR53_13080 PF00296 Luciferase-like monooxygenase CHR53_13085 PF00892 EamA-like transporter family CHR53_13090 PF01048 Phosphorylase superfamily CHR53_13110 PF07875 Coat F domain CHR53_13115 PF00465 Iron-containing alcohol dehydrogenase CHR53_13120 PF00171 Aldehyde dehydrogenase family CHR53_13150 PF04439 Streptomycin adenylyltransferase CHR53_13160 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_13170 PF06271 RDD family CHR53_13185 PF07726 ATPase family associated with various cellular activities (AAA) CHR53_13185 PF17863 AAA lid domain CHR53_13205 PF00535 Glycosyl transferase family 2 CHR53_13220 PF13180 PDZ domain CHR53_13220 PF17820 PDZ domain CHR53_13235 PF00474 Sodium:solute symporter family CHR53_13245 PF05525 Branched-chain amino acid transport protein CHR53_13250 PF13426 PAS domain CHR53_13250 PF02954 Bacterial regulatory protein, Fis family CHR53_13250 PF00158 Sigma-54 interaction domain CHR53_13255 PF00202 Aminotransferase class-III CHR53_13260 PF00171 Aldehyde dehydrogenase family CHR53_13285 PF00171 Aldehyde dehydrogenase family CHR53_13290 PF01472 PUA domain CHR53_13290 PF00696 Amino acid kinase family CHR53_13295 PF03358 NADPH-dependent FMN reductase CHR53_13300 PF00202 Aminotransferase class-III CHR53_13310 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CHR53_13315 PF01979 Amidohydrolase family CHR53_13320 PF01180 Dihydroorotate dehydrogenase CHR53_13325 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_13325 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CHR53_13330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_13330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_13335 PF00155 Aminotransferase class I and II CHR53_13340 PF13726 Na+-H+ antiporter family CHR53_13340 PF03553 Na+/H+ antiporter family CHR53_13345 PF00872 Transposase, Mutator family CHR53_13350 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_13350 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_13355 PF00155 Aminotransferase class I and II CHR53_13360 PF12833 Helix-turn-helix domain CHR53_13370 PF00005 ABC transporter CHR53_13375 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_13385 PF02954 Bacterial regulatory protein, Fis family CHR53_13385 PF00072 Response regulator receiver domain CHR53_13385 PF00158 Sigma-54 interaction domain CHR53_13390 PF13188 PAS domain CHR53_13390 PF00512 His Kinase A (phospho-acceptor) domain CHR53_13390 PF00072 Response regulator receiver domain CHR53_13390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_13390 PF08448 PAS fold CHR53_13400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_13405 PF01206 Sulfurtransferase TusA CHR53_13410 PF00581 Rhodanese-like domain CHR53_13425 PF07690 Major Facilitator Superfamily CHR53_13430 PF00440 Bacterial regulatory proteins, tetR family CHR53_13440 PF02225 PA domain CHR53_13440 PF04389 Peptidase family M28 CHR53_13450 PF01432 Peptidase family M3 CHR53_13450 PF08439 Oligopeptidase F CHR53_13455 PF00258 Flavodoxin CHR53_13460 PF00268 Ribonucleotide reductase, small chain CHR53_13465 PF03477 ATP cone domain CHR53_13465 PF02867 Ribonucleotide reductase, barrel domain CHR53_13465 PF00317 Ribonucleotide reductase, all-alpha domain CHR53_13480 PF00149 Calcineurin-like phosphoesterase CHR53_13480 PF00746 LPXTG cell wall anchor motif CHR53_13480 PF02872 5'-nucleotidase, C-terminal domain CHR53_13480 PF00565 Staphylococcal nuclease homologue CHR53_13500 PF04294 VanW like protein CHR53_13510 PF01619 Proline dehydrogenase CHR53_13520 PF00091 Tubulin/FtsZ family, GTPase domain CHR53_13520 PF12327 FtsZ family, C-terminal domain CHR53_13525 PF00155 Aminotransferase class I and II CHR53_13530 PF13520 Amino acid permease CHR53_13535 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_13535 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_13550 PF00269 Small, acid-soluble spore proteins, alpha/beta type CHR53_13565 PF16868 NMT1-like family CHR53_13570 PF01523 Putative modulator of DNA gyrase CHR53_13575 PF01523 Putative modulator of DNA gyrase CHR53_13580 PF01996 F420-0:Gamma-glutamyl ligase CHR53_13580 PF00881 Nitroreductase family CHR53_13590 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_13590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_13590 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_13600 PF00117 Glutamine amidotransferase class-I CHR53_13605 PF00425 chorismate binding enzyme CHR53_13605 PF04715 Anthranilate synthase component I, N terminal region CHR53_13610 PF00106 short chain dehydrogenase CHR53_13615 PF02515 CoA-transferase family III CHR53_13620 PF12146 Serine aminopeptidase, S33 CHR53_13625 PF01370 NAD dependent epimerase/dehydratase family CHR53_13625 PF08338 Domain of unknown function (DUF1731) CHR53_13630 PF13667 ThiC-associated domain CHR53_13630 PF01964 Radical SAM ThiC family CHR53_13640 PF00294 pfkB family carbohydrate kinase CHR53_13660 PF00158 Sigma-54 interaction domain CHR53_13660 PF13188 PAS domain CHR53_13660 PF02954 Bacterial regulatory protein, Fis family CHR53_13680 PF01979 Amidohydrolase family CHR53_13690 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_13695 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_13700 PF00005 ABC transporter CHR53_13715 PF10752 Protein of unknown function (DUF2533) CHR53_13720 PF08241 Methyltransferase domain CHR53_13740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_13740 PF03466 LysR substrate binding domain CHR53_13745 PF07690 Major Facilitator Superfamily CHR53_13760 PF00171 Aldehyde dehydrogenase family CHR53_13765 PF00375 Sodium:dicarboxylate symporter family CHR53_13770 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_13780 PF00171 Aldehyde dehydrogenase family CHR53_13785 PF00465 Iron-containing alcohol dehydrogenase CHR53_13790 PF00989 PAS fold CHR53_13790 PF02954 Bacterial regulatory protein, Fis family CHR53_13790 PF00158 Sigma-54 interaction domain CHR53_13800 PF00082 Subtilase family CHR53_13805 PF08241 Methyltransferase domain CHR53_13825 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family CHR53_13830 PF08361 MAATS-type transcriptional repressor, C-terminal region CHR53_13830 PF00440 Bacterial regulatory proteins, tetR family CHR53_13835 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CHR53_13835 PF14572 Phosphoribosyl synthetase-associated domain CHR53_13865 PF02146 Sir2 family CHR53_13885 PF01661 Macro domain CHR53_13890 PF02810 SEC-C motif CHR53_13890 PF07517 SecA DEAD-like domain CHR53_13890 PF07516 SecA Wing and Scaffold domain CHR53_13890 PF01043 SecA preprotein cross-linking domain CHR53_13895 PF00909 Ammonium Transporter Family CHR53_13900 PF00733 Asparagine synthase CHR53_13900 PF13537 Glutamine amidotransferase domain CHR53_13910 PF01493 GXGXG motif CHR53_13910 PF01645 Conserved region in glutamate synthase CHR53_13910 PF04898 Glutamate synthase central domain CHR53_13910 PF00310 Glutamine amidotransferases class-II CHR53_13915 PF00171 Aldehyde dehydrogenase family CHR53_13925 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHR53_13925 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_13930 PF00364 Biotin-requiring enzyme CHR53_13930 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHR53_13930 PF02817 e3 binding domain CHR53_13935 PF02780 Transketolase, C-terminal domain CHR53_13935 PF02779 Transketolase, pyrimidine binding domain CHR53_13940 PF00676 Dehydrogenase E1 component CHR53_13945 PF00158 Sigma-54 interaction domain CHR53_13950 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CHR53_13955 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CHR53_13960 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_13985 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CHR53_13990 PF02627 Carboxymuconolactone decarboxylase family CHR53_14005 PF01636 Phosphotransferase enzyme family CHR53_14010 PF04203 Sortase domain CHR53_14025 PF07690 Major Facilitator Superfamily CHR53_14030 PF02629 CoA binding domain CHR53_14030 PF00549 CoA-ligase CHR53_14035 PF00549 CoA-ligase CHR53_14035 PF08442 ATP-grasp domain CHR53_14040 PF00171 Aldehyde dehydrogenase family CHR53_14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_14045 PF03466 LysR substrate binding domain CHR53_14050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_14050 PF00989 PAS fold CHR53_14050 PF00512 His Kinase A (phospho-acceptor) domain CHR53_14075 PF00474 Sodium:solute symporter family CHR53_14080 PF00171 Aldehyde dehydrogenase family CHR53_14085 PF00696 Amino acid kinase family CHR53_14085 PF01472 PUA domain CHR53_14090 PF14748 Pyrroline-5-carboxylate reductase dimerisation CHR53_14090 PF03807 NADP oxidoreductase coenzyme F420-dependent CHR53_14095 PF05163 DinB family CHR53_14100 PF01638 HxlR-like helix-turn-helix CHR53_14105 PF00881 Nitroreductase family CHR53_14110 PF10676 Spore germination protein gerPA/gerPF CHR53_14140 PF00313 'Cold-shock' DNA-binding domain CHR53_14160 PF13538 UvrD-like helicase C-terminal domain CHR53_14170 PF16868 NMT1-like family CHR53_14175 PF00271 Helicase conserved C-terminal domain CHR53_14175 PF00270 DEAD/DEAH box helicase CHR53_14180 PF00216 Bacterial DNA-binding protein CHR53_14185 PF13183 4Fe-4S dicluster domain CHR53_14185 PF02754 Cysteine-rich domain CHR53_14190 PF02913 FAD linked oxidases, C-terminal domain CHR53_14190 PF01565 FAD binding domain CHR53_14200 PF01022 Bacterial regulatory protein, arsR family CHR53_14215 PF08818 Domain of unknown function (DU1801) CHR53_14225 PF01381 Helix-turn-helix CHR53_14230 PF01554 MatE CHR53_14235 PF04073 Aminoacyl-tRNA editing domain CHR53_14240 PF00158 Sigma-54 interaction domain CHR53_14245 PF01425 Amidase CHR53_14250 PF07690 Major Facilitator Superfamily CHR53_14260 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_14260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_14260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_14265 PF00202 Aminotransferase class-III CHR53_14270 PF09339 IclR helix-turn-helix domain CHR53_14270 PF01614 Bacterial transcriptional regulator CHR53_14275 PF00375 Sodium:dicarboxylate symporter family CHR53_14280 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CHR53_14290 PF02538 Hydantoinase B/oxoprolinase CHR53_14295 PF05378 Hydantoinase/oxoprolinase N-terminal region CHR53_14295 PF01968 Hydantoinase/oxoprolinase CHR53_14300 PF01381 Helix-turn-helix CHR53_14325 PF00440 Bacterial regulatory proteins, tetR family CHR53_14325 PF16295 Tetracyclin repressor-like, C-terminal domain CHR53_14335 PF01915 Glycosyl hydrolase family 3 C-terminal domain CHR53_14335 PF00933 Glycosyl hydrolase family 3 N terminal domain CHR53_14370 PF12796 Ankyrin repeats (3 copies) CHR53_14375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_14380 PF00860 Permease family CHR53_14385 PF03466 LysR substrate binding domain CHR53_14385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_14400 PF09297 NADH pyrophosphatase zinc ribbon domain CHR53_14400 PF00293 NUDIX domain CHR53_14410 PF00890 FAD binding domain CHR53_14430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_14435 PF02082 Transcriptional regulator CHR53_14460 PF07875 Coat F domain CHR53_14465 PF13823 Alcohol dehydrogenase GroES-associated CHR53_14465 PF08240 Alcohol dehydrogenase GroES-like domain CHR53_14465 PF00107 Zinc-binding dehydrogenase CHR53_14475 PF07875 Coat F domain CHR53_14485 PF00857 Isochorismatase family CHR53_14500 PF05175 Methyltransferase small domain CHR53_14500 PF17827 PrmC N-terminal domain CHR53_14520 PF13411 MerR HTH family regulatory protein CHR53_14525 PF00893 Small Multidrug Resistance protein CHR53_14535 PF07977 FabA-like domain CHR53_14545 PF13474 SnoaL-like domain CHR53_14550 PF04143 Sulphur transport CHR53_14580 PF00561 alpha/beta hydrolase fold CHR53_14595 PF00067 Cytochrome P450 CHR53_14600 PF00313 'Cold-shock' DNA-binding domain CHR53_14615 PF00313 'Cold-shock' DNA-binding domain CHR53_14625 PF00313 'Cold-shock' DNA-binding domain CHR53_14635 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_14650 PF12746 GNAT acetyltransferase CHR53_14660 PF12697 Alpha/beta hydrolase family CHR53_14675 PF00561 alpha/beta hydrolase fold CHR53_14680 PF01494 FAD binding domain CHR53_14700 PF01266 FAD dependent oxidoreductase CHR53_14705 PF07724 AAA domain (Cdc48 subfamily) CHR53_14705 PF06689 ClpX C4-type zinc finger CHR53_14705 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_14710 PF09388 Spo0E like sporulation regulatory protein CHR53_14720 PF02525 Flavodoxin-like fold CHR53_14755 PF08281 Sigma-70, region 4 CHR53_14755 PF12680 SnoaL-like domain CHR53_14755 PF04542 Sigma-70 region 2 CHR53_14770 PF00440 Bacterial regulatory proteins, tetR family CHR53_14770 PF17922 Tetracyclin repressor-like, C-terminal domain CHR53_14795 PF01061 ABC-2 type transporter CHR53_14800 PF13732 Domain of unknown function (DUF4162) CHR53_14800 PF00005 ABC transporter CHR53_14820 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CHR53_14820 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CHR53_14845 PF10502 Signal peptidase, peptidase S26 CHR53_14860 PF00873 AcrB/AcrD/AcrF family CHR53_14890 PF01235 Sodium:alanine symporter family CHR53_14895 PF07969 Amidohydrolase family CHR53_14915 PF00574 Clp protease CHR53_14930 PF00356 Bacterial regulatory proteins, lacI family CHR53_14930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family CHR53_14935 PF00144 Beta-lactamase CHR53_14940 PF00561 alpha/beta hydrolase fold CHR53_14955 PF01638 HxlR-like helix-turn-helix CHR53_14980 PF00881 Nitroreductase family CHR53_15000 PF13392 HNH endonuclease CHR53_15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_15035 PF03466 LysR substrate binding domain CHR53_15060 PF07883 Cupin domain CHR53_15110 PF03239 Iron permease FTR1 family CHR53_15120 PF09680 Family of unknown function CHR53_15125 PF09680 Family of unknown function CHR53_15130 PF00708 Acylphosphatase CHR53_15140 PF04199 Putative cyclase CHR53_15180 PF05163 DinB family CHR53_15195 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_15195 PF00589 Phage integrase family CHR53_15215 PF01047 MarR family CHR53_15225 PF00216 Bacterial DNA-binding protein CHR53_15230 PF05163 DinB family CHR53_15250 PF00589 Phage integrase family CHR53_15250 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_15260 PF01636 Phosphotransferase enzyme family CHR53_15265 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_15265 PF00589 Phage integrase family CHR53_15270 PF08241 Methyltransferase domain CHR53_15290 PF00313 'Cold-shock' DNA-binding domain CHR53_15310 PF01425 Amidase CHR53_15330 PF02538 Hydantoinase B/oxoprolinase CHR53_15335 PF05378 Hydantoinase/oxoprolinase N-terminal region CHR53_15335 PF01968 Hydantoinase/oxoprolinase CHR53_15340 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CHR53_15345 PF07690 Major Facilitator Superfamily CHR53_15345 PF00083 Sugar (and other) transporter CHR53_15350 PF00171 Aldehyde dehydrogenase family CHR53_15355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_15355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_15355 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_15355 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_15360 PF00202 Aminotransferase class-III CHR53_15365 PF00158 Sigma-54 interaction domain CHR53_15365 PF13426 PAS domain CHR53_15365 PF02954 Bacterial regulatory protein, Fis family CHR53_15370 PF02754 Cysteine-rich domain CHR53_15370 PF13183 4Fe-4S dicluster domain CHR53_15375 PF02913 FAD linked oxidases, C-terminal domain CHR53_15375 PF01565 FAD binding domain CHR53_15380 PF04299 Putative FMN-binding domain CHR53_15385 PF00171 Aldehyde dehydrogenase family CHR53_15390 PF00202 Aminotransferase class-III CHR53_15400 PF00795 Carbon-nitrogen hydrolase CHR53_15405 PF01546 Peptidase family M20/M25/M40 CHR53_15405 PF07687 Peptidase dimerisation domain CHR53_15410 PF02653 Branched-chain amino acid transport system / permease component CHR53_15410 PF11862 Domain of unknown function (DUF3382) CHR53_15415 PF02653 Branched-chain amino acid transport system / permease component CHR53_15420 PF00005 ABC transporter CHR53_15425 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_15425 PF00005 ABC transporter CHR53_15435 PF01546 Peptidase family M20/M25/M40 CHR53_15435 PF07687 Peptidase dimerisation domain CHR53_15445 PF01546 Peptidase family M20/M25/M40 CHR53_15445 PF07687 Peptidase dimerisation domain CHR53_15450 PF07690 Major Facilitator Superfamily CHR53_15515 PF02796 Helix-turn-helix domain of resolvase CHR53_15515 PF00239 Resolvase, N terminal domain CHR53_15540 PF13391 HNH endonuclease CHR53_15545 PF02481 DNA recombination-mediator protein A CHR53_15590 PF00145 C-5 cytosine-specific DNA methylase CHR53_15600 PF02976 DNA mismatch repair enzyme MutH CHR53_15645 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_15660 PF01022 Bacterial regulatory protein, arsR family CHR53_15675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_15675 PF00005 ABC transporter CHR53_15690 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_15695 PF00795 Carbon-nitrogen hydrolase CHR53_15700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_15705 PF00180 Isocitrate/isopropylmalate dehydrogenase CHR53_15705 PF03737 Aldolase/RraA CHR53_15710 PF00158 Sigma-54 interaction domain CHR53_15710 PF02954 Bacterial regulatory protein, Fis family CHR53_15710 PF13426 PAS domain CHR53_15720 PF04542 Sigma-70 region 2 CHR53_15720 PF08281 Sigma-70, region 4 CHR53_15750 PF00565 Staphylococcal nuclease homologue CHR53_15760 PF00772 DnaB-like helicase N terminal domain CHR53_15760 PF03796 DnaB-like helicase C terminal domain CHR53_15770 PF07690 Major Facilitator Superfamily CHR53_15780 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CHR53_15780 PF13457 GW (Gly-Tryp) dipeptide domain CHR53_15785 PF00471 Ribosomal protein L33 CHR53_15790 PF07683 Cobalamin synthesis protein cobW C-terminal domain CHR53_15790 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHR53_15795 PF01297 Zinc-uptake complex component A periplasmic CHR53_15795 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CHR53_15800 PF03773 Predicted permease CHR53_15810 PF03734 L,D-transpeptidase catalytic domain CHR53_15810 PF01476 LysM domain CHR53_15815 PF14537 Cytochrome c3 CHR53_15815 PF00890 FAD binding domain CHR53_15820 PF03466 LysR substrate binding domain CHR53_15820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_15825 PF05145 Transition state regulatory protein AbrB CHR53_15835 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_15840 PF00005 ABC transporter CHR53_15845 PF04303 PrpF protein CHR53_15855 PF00083 Sugar (and other) transporter CHR53_15860 PF02634 FdhD/NarQ family CHR53_15865 PF07849 Protein of unknown function (DUF1641) CHR53_15870 PF00384 Molybdopterin oxidoreductase CHR53_15870 PF01568 Molydopterin dinucleotide binding domain CHR53_15870 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHR53_15870 PF12838 4Fe-4S dicluster domain CHR53_15870 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CHR53_15885 PF00067 Cytochrome P450 CHR53_15890 PF12833 Helix-turn-helix domain CHR53_15890 PF17853 GGDEF-like domain CHR53_15900 PF12848 ABC transporter CHR53_15900 PF00005 ABC transporter CHR53_15920 PF01738 Dienelactone hydrolase family CHR53_15925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_15930 PF01613 Flavin reductase like domain CHR53_15935 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_15940 PF07681 DoxX CHR53_15945 PF01047 MarR family CHR53_15970 PF03600 Citrate transporter CHR53_15975 PF00158 Sigma-54 interaction domain CHR53_15975 PF13426 PAS domain CHR53_15975 PF02954 Bacterial regulatory protein, Fis family CHR53_16000 PF04239 Protein of unknown function (DUF421) CHR53_16010 PF07690 Major Facilitator Superfamily CHR53_16015 PF00171 Aldehyde dehydrogenase family CHR53_16020 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_16020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_16020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_16025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_16025 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_16025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_16035 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CHR53_16035 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CHR53_16045 PF13452 N-terminal half of MaoC dehydratase CHR53_16050 PF13607 Succinyl-CoA ligase like flavodoxin domain CHR53_16050 PF13380 CoA binding domain CHR53_16050 PF00583 Acetyltransferase (GNAT) family CHR53_16060 PF00873 AcrB/AcrD/AcrF family CHR53_16080 PF01258 Prokaryotic dksA/traR C4-type zinc finger CHR53_16090 PF02517 CPBP intramembrane metalloprotease CHR53_16105 PF04264 YceI-like domain CHR53_16115 PF05139 Erythromycin esterase CHR53_16115 PF00156 Phosphoribosyl transferase domain CHR53_16125 PF01476 LysM domain CHR53_16125 PF03734 L,D-transpeptidase catalytic domain CHR53_16130 PF03466 LysR substrate binding domain CHR53_16130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_16150 PF01966 HD domain CHR53_16155 PF11728 Putative aromatic acid exporter C-terminal domain CHR53_16155 PF06081 Aromatic acid exporter family member 1 CHR53_16160 PF00106 short chain dehydrogenase CHR53_16175 PF02589 LUD domain CHR53_16180 PF02589 LUD domain CHR53_16180 PF11870 Domain of unknown function (DUF3390) CHR53_16180 PF13183 4Fe-4S dicluster domain CHR53_16185 PF02754 Cysteine-rich domain CHR53_16190 PF03466 LysR substrate binding domain CHR53_16190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_16200 PF00196 Bacterial regulatory proteins, luxR family CHR53_16200 PF00072 Response regulator receiver domain CHR53_16205 PF00753 Metallo-beta-lactamase superfamily CHR53_16235 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_16240 PF01425 Amidase CHR53_16245 PF00375 Sodium:dicarboxylate symporter family CHR53_16260 PF07729 FCD domain CHR53_16260 PF00392 Bacterial regulatory proteins, gntR family CHR53_16270 PF07853 Protein of unknown function (DUF1648) CHR53_16270 PF13630 SdpI/YhfL protein family CHR53_16275 PF01022 Bacterial regulatory protein, arsR family CHR53_16285 PF00109 Beta-ketoacyl synthase, N-terminal domain CHR53_16285 PF02801 Beta-ketoacyl synthase, C-terminal domain CHR53_16300 PF00248 Aldo/keto reductase family CHR53_16305 PF07690 Major Facilitator Superfamily CHR53_16310 PF01638 HxlR-like helix-turn-helix CHR53_16320 PF07885 Ion channel CHR53_16325 PF01451 Low molecular weight phosphotyrosine protein phosphatase CHR53_16335 PF00381 PTS HPr component phosphorylation site CHR53_16340 PF00797 N-acetyltransferase CHR53_16345 PF01842 ACT domain CHR53_16345 PF00551 Formyl transferase CHR53_16350 PF04239 Protein of unknown function (DUF421) CHR53_16360 PF00082 Subtilase family CHR53_16365 PF00202 Aminotransferase class-III CHR53_16375 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CHR53_16380 PF00171 Aldehyde dehydrogenase family CHR53_16385 PF00850 Histone deacetylase domain CHR53_16390 PF00005 ABC transporter CHR53_16395 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_16395 PF00005 ABC transporter CHR53_16400 PF11862 Domain of unknown function (DUF3382) CHR53_16400 PF02653 Branched-chain amino acid transport system / permease component CHR53_16405 PF02653 Branched-chain amino acid transport system / permease component CHR53_16410 PF13458 Periplasmic binding protein CHR53_16415 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CHR53_16415 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CHR53_16420 PF07690 Major Facilitator Superfamily CHR53_16425 PF04055 Radical SAM superfamily CHR53_16430 PF01242 6-pyruvoyl tetrahydropterin synthase CHR53_16435 PF06508 Queuosine biosynthesis protein QueC CHR53_16450 PF04405 Domain of Unknown function (DUF542) CHR53_16450 PF01814 Hemerythrin HHE cation binding domain CHR53_16460 PF02634 FdhD/NarQ family CHR53_16465 PF00384 Molybdopterin oxidoreductase CHR53_16465 PF01568 Molydopterin dinucleotide binding domain CHR53_16470 PF10057 Uncharacterized conserved protein (DUF2294) CHR53_16485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHR53_16485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_16490 PF00464 Serine hydroxymethyltransferase CHR53_16500 PF00324 Amino acid permease CHR53_16510 PF03313 Serine dehydratase alpha chain CHR53_16515 PF00478 IMP dehydrogenase / GMP reductase domain CHR53_16525 PF13188 PAS domain CHR53_16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_16525 PF13426 PAS domain CHR53_16525 PF00512 His Kinase A (phospho-acceptor) domain CHR53_16525 PF00989 PAS fold CHR53_16530 PF01739 CheR methyltransferase, SAM binding domain CHR53_16530 PF03705 CheR methyltransferase, all-alpha domain CHR53_16535 PF09308 LuxQ, periplasmic CHR53_16535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_16535 PF00512 His Kinase A (phospho-acceptor) domain CHR53_16535 PF00072 Response regulator receiver domain CHR53_16540 PF01471 Putative peptidoglycan binding domain CHR53_16540 PF07486 Cell Wall Hydrolase CHR53_16550 PF02652 L-lactate permease CHR53_16560 PF01758 Sodium Bile acid symporter family CHR53_16575 PF00899 ThiF family CHR53_16580 PF05690 Thiazole biosynthesis protein ThiG CHR53_16585 PF05690 Thiazole biosynthesis protein ThiG CHR53_16585 PF02597 ThiS family CHR53_16590 PF01266 FAD dependent oxidoreductase CHR53_16595 PF02581 Thiamine monophosphate synthase CHR53_16600 PF00296 Luciferase-like monooxygenase CHR53_16605 PF00155 Aminotransferase class I and II CHR53_16610 PF00005 ABC transporter CHR53_16615 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_16620 PF09084 NMT1/THI5 like CHR53_16625 PF00465 Iron-containing alcohol dehydrogenase CHR53_16650 PF00501 AMP-binding enzyme CHR53_16650 PF13193 AMP-binding enzyme C-terminal domain CHR53_16655 PF04172 LrgB-like family CHR53_16660 PF03788 LrgA family CHR53_16665 PF03466 LysR substrate binding domain CHR53_16665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_16670 PF00890 FAD binding domain CHR53_16670 PF04205 FMN-binding domain CHR53_16670 PF03358 NADPH-dependent FMN reductase CHR53_16675 PF05525 Branched-chain amino acid transport protein CHR53_16680 PF00324 Amino acid permease CHR53_16685 PF02308 MgtC family CHR53_16690 PF02811 PHP domain CHR53_16695 PF08220 DeoR-like helix-turn-helix domain CHR53_16695 PF00455 DeoR C terminal sensor domain CHR53_16700 PF00005 ABC transporter CHR53_16700 PF08402 TOBE domain CHR53_16710 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_16720 PF01547 Bacterial extracellular solute-binding protein CHR53_16725 PF00056 lactate/malate dehydrogenase, NAD binding domain CHR53_16725 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CHR53_16730 PF00936 BMC domain CHR53_16735 PF03319 Ethanolamine utilisation protein EutN/carboxysome CHR53_16745 PF06130 Phosphate propanoyltransferase CHR53_16750 PF00936 BMC domain CHR53_16755 PF00171 Aldehyde dehydrogenase family CHR53_16755 PF00465 Iron-containing alcohol dehydrogenase CHR53_16760 PF00936 BMC domain CHR53_16765 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CHR53_16770 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CHR53_16775 PF06277 Ethanolamine utilisation protein EutA CHR53_16780 PF10662 Ethanolamine utilisation - propanediol utilisation CHR53_16785 PF00936 BMC domain CHR53_16790 PF04346 Ethanolamine utilisation protein, EutH CHR53_16795 PF03861 ANTAR domain CHR53_16795 PF00072 Response regulator receiver domain CHR53_16800 PF12282 Signal transduction histidine kinase CHR53_16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_16800 PF07568 Histidine kinase CHR53_16805 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CHR53_16810 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CHR53_16820 PF03773 Predicted permease CHR53_16825 PF07690 Major Facilitator Superfamily CHR53_16830 PF07969 Amidohydrolase family CHR53_16845 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CHR53_16845 PF00056 lactate/malate dehydrogenase, NAD binding domain CHR53_16850 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_16850 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_16855 PF03319 Ethanolamine utilisation protein EutN/carboxysome CHR53_16865 PF06130 Phosphate propanoyltransferase CHR53_16870 PF00936 BMC domain CHR53_16875 PF00171 Aldehyde dehydrogenase family CHR53_16875 PF00465 Iron-containing alcohol dehydrogenase CHR53_16880 PF00936 BMC domain CHR53_16895 PF02308 MgtC family CHR53_16900 PF00455 DeoR C terminal sensor domain CHR53_16900 PF08220 DeoR-like helix-turn-helix domain CHR53_16910 PF00083 Sugar (and other) transporter CHR53_16910 PF07690 Major Facilitator Superfamily CHR53_16920 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_16925 PF00005 ABC transporter CHR53_16925 PF08402 TOBE domain CHR53_16935 PF00202 Aminotransferase class-III CHR53_16950 PF00557 Metallopeptidase family M24 CHR53_16955 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_16960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CHR53_16965 PF00005 ABC transporter CHR53_16975 PF00324 Amino acid permease CHR53_16985 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_16985 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_16985 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_16990 PF00202 Aminotransferase class-III CHR53_16995 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_16995 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_17000 PF00392 Bacterial regulatory proteins, gntR family CHR53_17005 PF03466 LysR substrate binding domain CHR53_17005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_17015 PF01979 Amidohydrolase family CHR53_17030 PF00072 Response regulator receiver domain CHR53_17030 PF04703 FaeA-like protein CHR53_17035 PF00989 PAS fold CHR53_17035 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CHR53_17035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_17035 PF17203 Single cache domain 3 CHR53_17040 PF01970 Tripartite tricarboxylate transporter TctA family CHR53_17060 PF18014 Acetyltransferase (GNAT) domain CHR53_17060 PF13673 Acetyltransferase (GNAT) domain CHR53_17070 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_17075 PF13302 Acetyltransferase (GNAT) domain CHR53_17100 PF13378 Enolase C-terminal domain-like CHR53_17100 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_17120 PF03551 Transcriptional regulator PadR-like family CHR53_17130 PF03626 Prokaryotic Cytochrome C oxidase subunit IV CHR53_17135 PF00510 Cytochrome c oxidase subunit III CHR53_17140 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_17145 PF02790 Cytochrome C oxidase subunit II, transmembrane domain CHR53_17145 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CHR53_17160 PF00202 Aminotransferase class-III CHR53_17165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_17165 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_17165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_17170 PF02515 CoA-transferase family III CHR53_17175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHR53_17175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_17180 PF00158 Sigma-54 interaction domain CHR53_17190 PF03746 LamB/YcsF family CHR53_17200 PF02626 Carboxyltransferase domain, subdomain A and B CHR53_17210 PF13478 XdhC Rossmann domain CHR53_17210 PF02625 XdhC and CoxI family CHR53_17215 PF00941 FAD binding domain in molybdopterin dehydrogenase CHR53_17215 PF03450 CO dehydrogenase flavoprotein C-terminal domain CHR53_17220 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CHR53_17220 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CHR53_17225 PF00111 2Fe-2S iron-sulfur cluster binding domain CHR53_17225 PF01799 [2Fe-2S] binding domain CHR53_17240 PF00355 Rieske [2Fe-2S] domain CHR53_17245 PF00860 Permease family CHR53_17255 PF02423 Ornithine cyclodeaminase/mu-crystallin family CHR53_17260 PF17853 GGDEF-like domain CHR53_17260 PF13556 PucR C-terminal helix-turn-helix domain CHR53_17260 PF05651 Putative sugar diacid recognition CHR53_17265 PF00209 Sodium:neurotransmitter symporter family CHR53_17275 PF16350 FAD dependent oxidoreductase central domain CHR53_17275 PF01266 FAD dependent oxidoreductase CHR53_17275 PF08669 Glycine cleavage T-protein C-terminal barrel domain CHR53_17275 PF01571 Aminomethyltransferase folate-binding domain CHR53_17280 PF17853 GGDEF-like domain CHR53_17280 PF05651 Putative sugar diacid recognition CHR53_17280 PF13556 PucR C-terminal helix-turn-helix domain CHR53_17285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_17285 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_17285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_17290 PF00171 Aldehyde dehydrogenase family CHR53_17295 PF00155 Aminotransferase class I and II CHR53_17305 PF08757 CotH kinase protein CHR53_17315 PF01565 FAD binding domain CHR53_17315 PF02913 FAD linked oxidases, C-terminal domain CHR53_17320 PF13183 4Fe-4S dicluster domain CHR53_17320 PF02754 Cysteine-rich domain CHR53_17325 PF02913 FAD linked oxidases, C-terminal domain CHR53_17325 PF01565 FAD binding domain CHR53_17335 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CHR53_17340 PF00704 Glycosyl hydrolases family 18 CHR53_17340 PF01476 LysM domain CHR53_17355 PF17340 Family of unknown function (DUF5370) CHR53_17360 PF00391 PEP-utilising enzyme, mobile domain CHR53_17360 PF02896 PEP-utilising enzyme, TIM barrel domain CHR53_17360 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CHR53_17365 PF03618 Kinase/pyrophosphorylase CHR53_17370 PF08279 HTH domain CHR53_17370 PF00571 CBS domain CHR53_17375 PF06827 Zinc finger found in FPG and IleRS CHR53_17375 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CHR53_17375 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CHR53_17380 PF00293 NUDIX domain CHR53_17380 PF13344 Haloacid dehalogenase-like hydrolase CHR53_17430 PF03372 Endonuclease/Exonuclease/phosphatase family CHR53_17435 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CHR53_17450 PF13243 Squalene-hopene cyclase C-terminal domain CHR53_17450 PF13249 Squalene-hopene cyclase N-terminal domain CHR53_17455 PF13386 Cytochrome C biogenesis protein transmembrane region CHR53_17460 PF03253 Urea transporter CHR53_17470 PF01774 UreD urease accessory protein CHR53_17475 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHR53_17480 PF01730 UreF CHR53_17485 PF02814 UreE urease accessory protein, N-terminal domain CHR53_17485 PF05194 UreE urease accessory protein, C-terminal domain CHR53_17490 PF00449 Urease alpha-subunit, N-terminal domain CHR53_17490 PF01979 Amidohydrolase family CHR53_17495 PF00699 Urease beta subunit CHR53_17500 PF00547 Urease, gamma subunit CHR53_17505 PF03167 Uracil DNA glycosylase superfamily CHR53_17520 PF02424 ApbE family CHR53_17535 PF00486 Transcriptional regulatory protein, C terminal CHR53_17535 PF00072 Response regulator receiver domain CHR53_17540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_17540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_17550 PF13180 PDZ domain CHR53_17555 PF00512 His Kinase A (phospho-acceptor) domain CHR53_17555 PF00672 HAMP domain CHR53_17555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_17560 PF00072 Response regulator receiver domain CHR53_17560 PF00486 Transcriptional regulatory protein, C terminal CHR53_17570 PF04294 VanW like protein CHR53_17590 PF08241 Methyltransferase domain CHR53_17605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_17605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_17625 PF04239 Protein of unknown function (DUF421) CHR53_17630 PF13536 Putative multidrug resistance efflux transporter CHR53_17635 PF00324 Amino acid permease CHR53_17655 PF00152 tRNA synthetases class II (D, K and N) CHR53_17655 PF01336 OB-fold nucleic acid binding domain CHR53_17670 PF13538 UvrD-like helicase C-terminal domain CHR53_17675 PF04264 YceI-like domain CHR53_17680 PF03734 L,D-transpeptidase catalytic domain CHR53_17680 PF01476 LysM domain CHR53_17685 PF02583 Metal-sensitive transcriptional repressor CHR53_17710 PF13411 MerR HTH family regulatory protein CHR53_17715 PF03449 Transcription elongation factor, N-terminal CHR53_17715 PF01272 Transcription elongation factor, GreA/GreB, C-term CHR53_17720 PF01757 Acyltransferase family CHR53_17730 PF00672 HAMP domain CHR53_17730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_17730 PF00512 His Kinase A (phospho-acceptor) domain CHR53_17735 PF00072 Response regulator receiver domain CHR53_17735 PF00486 Transcriptional regulatory protein, C terminal CHR53_17750 PF13840 ACT domain CHR53_17750 PF00696 Amino acid kinase family CHR53_17760 PF09383 NIL domain CHR53_17760 PF00005 ABC transporter CHR53_17765 PF02653 Branched-chain amino acid transport system / permease component CHR53_17780 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_17785 PF09680 Family of unknown function CHR53_17790 PF00565 Staphylococcal nuclease homologue CHR53_17795 PF01348 Type II intron maturase CHR53_17795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHR53_17800 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CHR53_17805 PF00884 Sulfatase CHR53_17815 PF08141 Small acid-soluble spore protein H family CHR53_17820 PF02254 TrkA-N domain CHR53_17820 PF02080 TrkA-C domain CHR53_17825 PF02386 Cation transport protein CHR53_17830 PF07690 Major Facilitator Superfamily CHR53_17835 PF07690 Major Facilitator Superfamily CHR53_17840 PF00384 Molybdopterin oxidoreductase CHR53_17840 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHR53_17840 PF01568 Molydopterin dinucleotide binding domain CHR53_17845 PF01568 Molydopterin dinucleotide binding domain CHR53_17845 PF00384 Molybdopterin oxidoreductase CHR53_17845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHR53_17850 PF00512 His Kinase A (phospho-acceptor) domain CHR53_17850 PF13426 PAS domain CHR53_17850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_17850 PF00989 PAS fold CHR53_17850 PF13188 PAS domain CHR53_17880 PF02665 Nitrate reductase gamma subunit CHR53_17890 PF14711 Respiratory nitrate reductase beta C-terminal CHR53_17890 PF13247 4Fe-4S dicluster domain CHR53_17895 PF14710 Respiratory nitrate reductase alpha N-terminal CHR53_17895 PF01568 Molydopterin dinucleotide binding domain CHR53_17895 PF00384 Molybdopterin oxidoreductase CHR53_17915 PF02630 SCO1/SenC CHR53_17920 PF00005 ABC transporter CHR53_17920 PF12848 ABC transporter CHR53_17930 PF03698 Uncharacterised protein family (UPF0180) CHR53_17940 PF00011 Hsp20/alpha crystallin family CHR53_17945 PF07943 Penicillin-binding protein 5, C-terminal domain CHR53_17945 PF00768 D-alanyl-D-alanine carboxypeptidase CHR53_17950 PF09924 Uncharacterised conserved protein (DUF2156) CHR53_17950 PF03706 Lysylphosphatidylglycerol synthase TM region CHR53_17965 PF02096 60Kd inner membrane protein CHR53_17970 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHR53_17975 PF02537 CrcB-like protein, Camphor Resistance (CrcB) CHR53_17990 PF13193 AMP-binding enzyme C-terminal domain CHR53_17990 PF00501 AMP-binding enzyme CHR53_18000 PF00364 Biotin-requiring enzyme CHR53_18000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHR53_18000 PF02817 e3 binding domain CHR53_18005 PF16078 2-oxoglutarate dehydrogenase N-terminus CHR53_18005 PF16870 2-oxoglutarate dehydrogenase C-terminal CHR53_18005 PF02779 Transketolase, pyrimidine binding domain CHR53_18005 PF00676 Dehydrogenase E1 component CHR53_18015 PF00290 Tryptophan synthase alpha chain CHR53_18020 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_18025 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase CHR53_18030 PF00218 Indole-3-glycerol phosphate synthase CHR53_18035 PF02885 Glycosyl transferase family, helical bundle domain CHR53_18035 PF00591 Glycosyl transferase family, a/b domain CHR53_18040 PF00117 Glutamine amidotransferase class-I CHR53_18040 PF00591 Glycosyl transferase family, a/b domain CHR53_18040 PF02885 Glycosyl transferase family, helical bundle domain CHR53_18050 PF07690 Major Facilitator Superfamily CHR53_18075 PF00313 'Cold-shock' DNA-binding domain CHR53_18080 PF02735 Ku70/Ku80 beta-barrel domain CHR53_18085 PF01068 ATP dependent DNA ligase domain CHR53_18090 PF01678 Diaminopimelate epimerase CHR53_18105 PF00449 Urease alpha-subunit, N-terminal domain CHR53_18105 PF01979 Amidohydrolase family CHR53_18120 PF10676 Spore germination protein gerPA/gerPF CHR53_18125 PF10676 Spore germination protein gerPA/gerPF CHR53_18155 PF03572 Peptidase family S41 CHR53_18155 PF01471 Putative peptidoglycan binding domain CHR53_18155 PF17820 PDZ domain CHR53_18160 PF01048 Phosphorylase superfamily CHR53_18170 PF14191 YodL-like CHR53_18175 PF07070 SpoOM protein CHR53_18180 PF14162 YozD-like protein CHR53_18190 PF06855 YozE SAM-like fold CHR53_18195 PF14122 YokU-like protein, putative antitoxin CHR53_18200 PF12544 Lysine-2,3-aminomutase CHR53_18205 PF00158 Sigma-54 interaction domain CHR53_18205 PF02954 Bacterial regulatory protein, Fis family CHR53_18205 PF13426 PAS domain CHR53_18210 PF00583 Acetyltransferase (GNAT) family CHR53_18215 PF01546 Peptidase family M20/M25/M40 CHR53_18215 PF07687 Peptidase dimerisation domain CHR53_18220 PF01144 Coenzyme A transferase CHR53_18225 PF01144 Coenzyme A transferase CHR53_18230 PF00202 Aminotransferase class-III CHR53_18235 PF02386 Cation transport protein CHR53_18250 PF01641 SelR domain CHR53_18255 PF01625 Peptide methionine sulfoxide reductase CHR53_18260 PF03193 RsgA GTPase CHR53_18275 PF13472 GDSL-like Lipase/Acylhydrolase family CHR53_18280 PF02630 SCO1/SenC CHR53_18285 PF00512 His Kinase A (phospho-acceptor) domain CHR53_18285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_18285 PF00989 PAS fold CHR53_18295 PF02645 Uncharacterised protein, DegV family COG1307 CHR53_18305 PF12389 Camelysin metallo-endopeptidase CHR53_18320 PF08671 Anti-repressor SinI CHR53_18320 PF01381 Helix-turn-helix CHR53_18325 PF00902 Sec-independent protein translocase protein (TatC) CHR53_18330 PF02416 mttA/Hcf106 family CHR53_18340 PF00186 Dihydrofolate reductase CHR53_18345 PF00303 Thymidylate synthase CHR53_18355 PF02342 TerD domain CHR53_18360 PF02342 TerD domain CHR53_18365 PF05816 Toxic anion resistance protein (TelA) CHR53_18370 PF14266 Putative component of 'biosynthetic module' CHR53_18395 PF03741 Integral membrane protein TerC family CHR53_18400 PF02342 TerD domain CHR53_18405 PF14005 YpjP-like protein CHR53_18410 PF06491 Disulphide isomerase CHR53_18415 PF08712 Scaffold protein Nfu/NifU N terminal CHR53_18415 PF13769 Virulence factor CHR53_18420 PF12848 ABC transporter CHR53_18420 PF00005 ABC transporter CHR53_18420 PF16326 ABC transporter C-terminal domain CHR53_18425 PF01966 HD domain CHR53_18430 PF02645 Uncharacterised protein, DegV family COG1307 CHR53_18440 PF01268 Formate--tetrahydrofolate ligase CHR53_18445 PF04204 Homoserine O-succinyltransferase CHR53_18455 PF01325 Iron dependent repressor, N-terminal DNA binding domain CHR53_18455 PF02742 Iron dependent repressor, metal binding and dimerisation domain CHR53_18470 PF00313 'Cold-shock' DNA-binding domain CHR53_18480 PF13456 Reverse transcriptase-like CHR53_18495 PF02681 Divergent PAP2 family CHR53_18505 PF01367 5'-3' exonuclease, C-terminal SAM fold CHR53_18505 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHR53_18510 PF00581 Rhodanese-like domain CHR53_18515 PF00350 Dynamin family CHR53_18520 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family CHR53_18525 PF00195 Chalcone and stilbene synthases, N-terminal domain CHR53_18525 PF02797 Chalcone and stilbene synthases, C-terminal domain CHR53_18535 PF09125 Cytochrome C oxidase subunit II, transmembrane CHR53_18535 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CHR53_18540 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_18550 PF02074 Carboxypeptidase Taq (M32) metallopeptidase CHR53_18560 PF00115 Cytochrome C and Quinol oxidase polypeptide I CHR53_18565 PF00027 Cyclic nucleotide-binding domain CHR53_18565 PF13545 Crp-like helix-turn-helix domain CHR53_18585 PF01883 Iron-sulfur cluster assembly protein CHR53_18590 PF13307 Helicase C-terminal domain CHR53_18595 PF02926 THUMP domain CHR53_18595 PF01170 Putative RNA methylase family UPF0020 CHR53_18605 PF05103 DivIVA protein CHR53_18610 PF06908 YspA SLOG family CHR53_18615 PF11122 Inner spore coat protein D CHR53_18620 PF13482 RNase_H superfamily CHR53_18625 PF09369 Domain of unknown function (DUF1998) CHR53_18625 PF00270 DEAD/DEAH box helicase CHR53_18625 PF00271 Helicase conserved C-terminal domain CHR53_18630 PF00027 Cyclic nucleotide-binding domain CHR53_18630 PF13545 Crp-like helix-turn-helix domain CHR53_18635 PF00011 Hsp20/alpha crystallin family CHR53_18640 PF14179 YppG-like protein CHR53_18660 PF10720 Protein of unknown function (DUF2515) CHR53_18665 PF03838 Recombination protein U CHR53_18670 PF00912 Transglycosylase CHR53_18670 PF00905 Penicillin binding protein transpeptidase domain CHR53_18680 PF10576 Iron-sulfur binding domain of endonuclease III CHR53_18680 PF00633 Helix-hairpin-helix motif CHR53_18680 PF00730 HhH-GPD superfamily base excision DNA repair protein CHR53_18685 PF07261 Replication initiation and membrane attachment CHR53_18690 PF00155 Aminotransferase class I and II CHR53_18705 PF00929 Exonuclease CHR53_18705 PF04851 Type III restriction enzyme, res subunit CHR53_18705 PF13307 Helicase C-terminal domain CHR53_18710 PF02261 Aspartate decarboxylase CHR53_18715 PF02569 Pantoate-beta-alanine ligase CHR53_18720 PF02548 Ketopantoate hydroxymethyltransferase CHR53_18725 PF03099 Biotin/lipoate A/B protein ligase family CHR53_18725 PF08279 HTH domain CHR53_18725 PF02237 Biotin protein ligase C terminal domain CHR53_18730 PF12627 Probable RNA and SrmB- binding site of polymerase A CHR53_18730 PF13735 tRNA nucleotidyltransferase domain 2 putative CHR53_18730 PF01743 Poly A polymerase head domain CHR53_18735 PF00534 Glycosyl transferases group 1 CHR53_18735 PF13439 Glycosyltransferase Family 4 CHR53_18740 PF02585 GlcNAc-PI de-N-acetylase CHR53_18745 PF02142 MGS-like domain CHR53_18750 PF01113 Dihydrodipicolinate reductase, N-terminus CHR53_18750 PF05173 Dihydrodipicolinate reductase, C-terminus CHR53_18755 PF03819 MazG nucleotide pyrophosphohydrolase domain CHR53_18760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_18760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_18765 PF04298 Putative neutral zinc metallopeptidase CHR53_18770 PF09577 Sporulation protein YpjB (SpoYpjB) CHR53_18775 PF07187 Protein of unknown function (DUF1405) CHR53_18780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_18780 PF00032 Cytochrome b(C-terminal)/b6/petD CHR53_18785 PF00033 Cytochrome b/b6/petB CHR53_18790 PF00355 Rieske [2Fe-2S] domain CHR53_18795 PF10673 Protein of unknown function (DUF2487) CHR53_18800 PF08864 UPF0302 domain CHR53_18800 PF08858 IDEAL domain CHR53_18815 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHR53_18820 PF01842 ACT domain CHR53_18820 PF02153 Prephenate dehydrogenase CHR53_18825 PF00155 Aminotransferase class I and II CHR53_18830 PF07736 Chorismate mutase type I CHR53_18835 PF01761 3-dehydroquinate synthase CHR53_18840 PF01264 Chorismate synthase CHR53_18845 PF00334 Nucleoside diphosphate kinase CHR53_18855 PF00348 Polyprenyl synthetase CHR53_18860 PF01209 ubiE/COQ5 methyltransferase family CHR53_18865 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 CHR53_18870 PF02081 Tryptophan RNA-binding attenuator protein CHR53_18875 PF01227 GTP cyclohydrolase I CHR53_18880 PF00216 Bacterial DNA-binding protein CHR53_18885 PF09547 Stage IV sporulation protein A (spore_IV_A) CHR53_18895 PF10966 Protein of unknown function (DUF2768) CHR53_18900 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CHR53_18900 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CHR53_18905 PF01926 50S ribosome-binding GTPase CHR53_18905 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CHR53_18915 PF14140 YpzI-like protein CHR53_18920 PF01070 FMN-dependent dehydrogenase CHR53_18925 PF00575 S1 RNA binding domain CHR53_18930 PF01553 Acyltransferase CHR53_18935 PF02224 Cytidylate kinase CHR53_18945 PF14620 YpeB sporulation CHR53_18945 PF03413 Peptidase propeptide and YPEB domain CHR53_18950 PF07486 Cell Wall Hydrolase CHR53_18950 PF01471 Putative peptidoglycan binding domain CHR53_18975 PF13367 PrsW family intramembrane metalloprotease CHR53_18980 PF00710 Asparaginase, N-terminal CHR53_18980 PF17763 Glutaminase/Asparaginase C-terminal domain CHR53_18990 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_18990 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_18995 PF05389 Negative regulator of genetic competence (MecA) CHR53_19000 PF00149 Calcineurin-like phosphoesterase CHR53_19010 PF11007 Spore coat associated protein JA (CotJA) CHR53_19015 PF12652 CotJB protein CHR53_19020 PF05067 Manganese containing catalase CHR53_19025 PF10864 Protein of unknown function (DUF2663) CHR53_19035 PF02517 CPBP intramembrane metalloprotease CHR53_19040 PF00270 DEAD/DEAH box helicase CHR53_19040 PF00271 Helicase conserved C-terminal domain CHR53_19045 PF14493 Helix-turn-helix domain CHR53_19055 PF12822 ECF transporter, substrate-specific component CHR53_19060 PF05257 CHAP domain CHR53_19060 PF01476 LysM domain CHR53_19070 PF04542 Sigma-70 region 2 CHR53_19070 PF08281 Sigma-70, region 4 CHR53_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_19075 PF00672 HAMP domain CHR53_19075 PF00512 His Kinase A (phospho-acceptor) domain CHR53_19075 PF00989 PAS fold CHR53_19075 PF18698 Histidine kinase sensor domain CHR53_19080 PF00072 Response regulator receiver domain CHR53_19080 PF00486 Transcriptional regulatory protein, C terminal CHR53_19085 PF01578 Cytochrome C assembly protein CHR53_19090 PF05140 ResB-like family CHR53_19095 PF00578 AhpC/TSA family CHR53_19100 PF01479 S4 domain CHR53_19100 PF00849 RNA pseudouridylate synthase CHR53_19105 PF07670 Nucleoside recognition CHR53_19110 PF07670 Nucleoside recognition CHR53_19115 PF07943 Penicillin-binding protein 5, C-terminal domain CHR53_19115 PF00768 D-alanyl-D-alanine carboxypeptidase CHR53_19120 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CHR53_19120 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CHR53_19130 PF04079 Segregation and condensation complex subunit ScpB CHR53_19135 PF02616 Segregation and condensation protein ScpA CHR53_19145 PF03745 Domain of unknown function (DUF309) CHR53_19150 PF00583 Acetyltransferase (GNAT) family CHR53_19155 PF06207 Protein of unknown function (DUF1002) CHR53_19160 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHR53_19160 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CHR53_19165 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_19170 PF14097 Stage V sporulation protein AE1 CHR53_19175 PF13782 Stage V sporulation protein AB CHR53_19180 PF12164 Stage V sporulation protein AA CHR53_19185 PF04542 Sigma-70 region 2 CHR53_19185 PF04539 Sigma-70 region 3 CHR53_19185 PF04545 Sigma-70, region 4 CHR53_19190 PF13581 Histidine kinase-like ATPase domain CHR53_19195 PF01740 STAS domain CHR53_19200 PF00768 D-alanyl-D-alanine carboxypeptidase CHR53_19200 PF07943 Penicillin-binding protein 5, C-terminal domain CHR53_19205 PF00591 Glycosyl transferase family, a/b domain CHR53_19205 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CHR53_19205 PF02885 Glycosyl transferase family, helical bundle domain CHR53_19210 PF01676 Metalloenzyme superfamily CHR53_19215 PF02899 Phage integrase, N-terminal SAM-like domain CHR53_19215 PF00589 Phage integrase family CHR53_19220 PF14004 Protein of unknown function (DUF4227) CHR53_19225 PF01475 Ferric uptake regulator family CHR53_19230 PF01944 Stage II sporulation protein M CHR53_19240 PF00293 NUDIX domain CHR53_19245 PF13072 Mother cell inhibitor of FtsZ CHR53_19250 PF00248 Aldo/keto reductase family CHR53_19260 PF00108 Thiolase, N-terminal domain CHR53_19260 PF02803 Thiolase, C-terminal domain CHR53_19265 PF00682 HMGL-like CHR53_19270 PF12146 Serine aminopeptidase, S33 CHR53_19285 PF08863 YolD-like protein CHR53_19290 PF00817 impB/mucB/samB family CHR53_19290 PF11799 impB/mucB/samB family C-terminal domain CHR53_19290 PF11798 IMS family HHH motif CHR53_19295 PF03060 Nitronate monooxygenase CHR53_19305 PF00106 short chain dehydrogenase CHR53_19310 PF00753 Metallo-beta-lactamase superfamily CHR53_19315 PF03807 NADP oxidoreductase coenzyme F420-dependent CHR53_19315 PF14748 Pyrroline-5-carboxylate reductase dimerisation CHR53_19320 PF00535 Glycosyl transferase family 2 CHR53_19325 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CHR53_19330 PF12706 Beta-lactamase superfamily domain CHR53_19330 PF00753 Metallo-beta-lactamase superfamily CHR53_19335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CHR53_19335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CHR53_19340 PF00817 impB/mucB/samB family CHR53_19340 PF11798 IMS family HHH motif CHR53_19340 PF11799 impB/mucB/samB family C-terminal domain CHR53_19345 PF01546 Peptidase family M20/M25/M40 CHR53_19345 PF07687 Peptidase dimerisation domain CHR53_19350 PF01039 Carboxyl transferase domain CHR53_19360 PF03734 L,D-transpeptidase catalytic domain CHR53_19365 PF00005 ABC transporter CHR53_19370 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_19375 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_19380 PF06491 Disulphide isomerase CHR53_19395 PF02310 B12 binding domain CHR53_19395 PF01642 Methylmalonyl-CoA mutase CHR53_19400 PF01642 Methylmalonyl-CoA mutase CHR53_19405 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHR53_19405 PF00364 Biotin-requiring enzyme CHR53_19405 PF02817 e3 binding domain CHR53_19410 PF02780 Transketolase, C-terminal domain CHR53_19410 PF02779 Transketolase, pyrimidine binding domain CHR53_19415 PF00676 Dehydrogenase E1 component CHR53_19420 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_19420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CHR53_19425 PF00871 Acetokinase family CHR53_19430 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_19430 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_19435 PF01515 Phosphate acetyl/butaryl transferase CHR53_19440 PF00989 PAS fold CHR53_19440 PF00158 Sigma-54 interaction domain CHR53_19440 PF02954 Bacterial regulatory protein, Fis family CHR53_19445 PF11118 Protein of unknown function (DUF2627) CHR53_19450 PF03009 Glycerophosphoryl diester phosphodiesterase family CHR53_19455 PF00072 Response regulator receiver domain CHR53_19455 PF08769 Sporulation initiation factor Spo0A C terminal CHR53_19460 PF17820 PDZ domain CHR53_19460 PF05580 SpoIVB peptidase S55 CHR53_19465 PF13476 AAA domain CHR53_19470 PF02863 Arginine repressor, C-terminal domain CHR53_19470 PF01316 Arginine repressor, DNA binding domain CHR53_19475 PF01479 S4 domain CHR53_19475 PF01728 FtsJ-like methyltransferase CHR53_19480 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CHR53_19480 PF02780 Transketolase, C-terminal domain CHR53_19480 PF02779 Transketolase, pyrimidine binding domain CHR53_19485 PF00348 Polyprenyl synthetase CHR53_19490 PF02609 Exonuclease VII small subunit CHR53_19495 PF13742 OB-fold nucleic acid binding domain CHR53_19495 PF02601 Exonuclease VII, large subunit CHR53_19500 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CHR53_19500 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CHR53_19505 PF01029 NusB family CHR53_19510 PF03780 Asp23 family, cell envelope-related function CHR53_19515 PF00289 Biotin carboxylase, N-terminal domain CHR53_19515 PF02785 Biotin carboxylase C-terminal domain CHR53_19515 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_19520 PF00364 Biotin-requiring enzyme CHR53_19525 PF12685 SpoIIIAH-like protein CHR53_19535 PF09581 Stage III sporulation protein AF (Spore_III_AF) CHR53_19540 PF09546 Stage III sporulation protein AE (spore_III_AE) CHR53_19545 PF06686 Stage III sporulation protein AC/AD protein family CHR53_19550 PF06686 Stage III sporulation protein AC/AD protein family CHR53_19555 PF09548 Stage III sporulation protein AB (spore_III_AB) CHR53_19570 PF00578 AhpC/TSA family CHR53_19580 PF01578 Cytochrome C assembly protein CHR53_19590 PF00005 ABC transporter CHR53_19610 PF01578 Cytochrome C assembly protein CHR53_19610 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal CHR53_19615 PF03100 CcmE CHR53_19625 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_19625 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP CHR53_19640 PF01132 Elongation factor P (EF-P) OB domain CHR53_19640 PF08207 Elongation factor P (EF-P) KOW-like domain CHR53_19640 PF09285 Elongation factor P, C-terminal CHR53_19645 PF01321 Creatinase/Prolidase N-terminal domain CHR53_19645 PF00557 Metallopeptidase family M24 CHR53_19650 PF11085 Conserved membrane protein YqhR CHR53_19655 PF07136 Protein of unknown function (DUF1385) CHR53_19665 PF01734 Patatin-like phospholipase CHR53_19670 PF00403 Heavy-metal-associated domain CHR53_19675 PF00403 Heavy-metal-associated domain CHR53_19690 PF01476 LysM domain CHR53_19690 PF00877 NlpC/P60 family CHR53_19695 PF00317 Ribonucleotide reductase, all-alpha domain CHR53_19695 PF02867 Ribonucleotide reductase, barrel domain CHR53_19695 PF03477 ATP cone domain CHR53_19700 PF03099 Biotin/lipoate A/B protein ligase family CHR53_19705 PF00581 Rhodanese-like domain CHR53_19710 PF02347 Glycine cleavage system P-protein CHR53_19715 PF02347 Glycine cleavage system P-protein CHR53_19720 PF08669 Glycine cleavage T-protein C-terminal barrel domain CHR53_19720 PF01571 Aminomethyltransferase folate-binding domain CHR53_19725 PF00176 SNF2 family N-terminal domain CHR53_19725 PF00271 Helicase conserved C-terminal domain CHR53_19730 PF11079 Bacterial protein YqhG of unknown function CHR53_19740 PF10958 Protein of unknown function (DUF2759) CHR53_19745 PF00753 Metallo-beta-lactamase superfamily CHR53_19755 PF11117 Protein of unknown function (DUF2626) CHR53_19765 PF14038 YqzE-like protein CHR53_19785 PF07963 Prokaryotic N-terminal methylation motif CHR53_19790 PF07963 Prokaryotic N-terminal methylation motif CHR53_19795 PF00482 Type II secretion system (T2SS), protein F CHR53_19800 PF00437 Type II/IV secretion system protein CHR53_19805 PF00480 ROK family CHR53_19820 PF01694 Rhomboid family CHR53_19840 PF01812 5-formyltetrahydrofolate cyclo-ligase family CHR53_19845 PF00471 Ribosomal protein L33 CHR53_19855 PF13439 Glycosyltransferase Family 4 CHR53_19855 PF00534 Glycosyl transferases group 1 CHR53_19865 PF01895 PhoU domain CHR53_19870 PF00005 ABC transporter CHR53_19875 PF00005 ABC transporter CHR53_19880 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_19885 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_19890 PF12849 PBP superfamily domain CHR53_19900 PF07690 Major Facilitator Superfamily CHR53_19905 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CHR53_19905 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CHR53_19910 PF00027 Cyclic nucleotide-binding domain CHR53_19910 PF00325 Bacterial regulatory proteins, crp family CHR53_19915 PF06691 Protein of unknown function (DUF1189) CHR53_19925 PF04551 GcpE protein CHR53_19940 PF01475 Ferric uptake regulator family CHR53_19945 PF00950 ABC 3 transport family CHR53_19950 PF00005 ABC transporter CHR53_19955 PF11116 Protein of unknown function (DUF2624) CHR53_19960 PF02401 LytB protein CHR53_19970 PF00270 DEAD/DEAH box helicase CHR53_19970 PF00271 Helicase conserved C-terminal domain CHR53_19975 PF01261 Xylose isomerase-like TIM barrel CHR53_19980 PF01784 NIF3 (NGG1p interacting factor 3) CHR53_19985 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CHR53_19990 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_19995 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_19995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_19995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_20000 PF04539 Sigma-70 region 3 CHR53_20000 PF00140 Sigma-70 factor, region 1.2 CHR53_20000 PF04542 Sigma-70 region 2 CHR53_20000 PF03979 Sigma-70 factor, region 1.1 CHR53_20000 PF04545 Sigma-70, region 4 CHR53_20005 PF01807 CHC2 zinc finger CHR53_20005 PF08275 DNA primase catalytic core, N-terminal domain CHR53_20005 PF10410 DnaB-helicase binding domain of primase CHR53_20010 PF03618 Kinase/pyrophosphorylase CHR53_20015 PF00571 CBS domain CHR53_20015 PF08279 HTH domain CHR53_20020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHR53_20020 PF03129 Anticodon binding domain CHR53_20025 PF11967 Recombination protein O N terminal CHR53_20025 PF02565 Recombination protein O C terminal CHR53_20030 PF14006 YqzL-like protein CHR53_20035 PF01926 50S ribosome-binding GTPase CHR53_20035 PF07650 KH domain CHR53_20040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_20045 PF01219 Prokaryotic diacylglycerol kinase CHR53_20050 PF02130 Uncharacterized protein family UPF0054 CHR53_20055 PF01966 HD domain CHR53_20055 PF07697 7TM-HD extracellular CHR53_20055 PF07698 7TM receptor with intracellular HD hydrolase CHR53_20060 PF02562 PhoH-like protein CHR53_20065 PF06898 Putative stage IV sporulation protein YqfD CHR53_20070 PF07873 YabP family CHR53_20080 PF12127 SigmaW regulon antibacterial CHR53_20085 PF01972 Serine dehydrogenase proteinase CHR53_20085 PF01957 NfeD-like C-terminal, partner-binding CHR53_20090 PF09424 Yqey-like protein CHR53_20095 PF01165 Ribosomal protein S21 CHR53_20100 PF02690 Na+/Pi-cotransporter CHR53_20105 PF04055 Radical SAM superfamily CHR53_20105 PF01938 TRAM domain CHR53_20105 PF00919 Uncharacterized protein family UPF0004 CHR53_20110 PF04452 RNA methyltransferase CHR53_20120 PF00226 DnaJ domain CHR53_20120 PF00684 DnaJ central domain CHR53_20120 PF01556 DnaJ C terminal domain CHR53_20125 PF00012 Hsp70 protein CHR53_20130 PF01025 GrpE CHR53_20140 PF04055 Radical SAM superfamily CHR53_20140 PF06969 HemN C-terminal domain CHR53_20145 PF03144 Elongation factor Tu domain 2 CHR53_20145 PF00679 Elongation factor G C-terminus CHR53_20145 PF00009 Elongation factor Tu GTP binding domain CHR53_20145 PF06421 GTP-binding protein LepA C-terminus CHR53_20155 PF07454 Stage II sporulation protein P (SpoIIP) CHR53_20160 PF03418 Germination protease CHR53_20165 PF01649 Ribosomal protein S20 CHR53_20170 PF06144 DNA polymerase III, delta subunit CHR53_20175 PF14141 YqzM-like protein CHR53_20180 PF03772 Competence protein CHR53_20180 PF00753 Metallo-beta-lactamase superfamily CHR53_20180 PF13567 Domain of unknown function (DUF4131) CHR53_20185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_20190 PF10531 SLBB domain CHR53_20195 PF14748 Pyrroline-5-carboxylate reductase dimerisation CHR53_20195 PF03807 NADP oxidoreductase coenzyme F420-dependent CHR53_20200 PF13649 Methyltransferase domain CHR53_20210 PF01966 HD domain CHR53_20215 PF01467 Cytidylyltransferase-like CHR53_20220 PF01985 CRS1 / YhbY (CRM) domain CHR53_20225 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CHR53_20225 PF08501 Shikimate dehydrogenase substrate binding domain CHR53_20225 PF01488 Shikimate / quinate 5-dehydrogenase CHR53_20230 PF01926 50S ribosome-binding GTPase CHR53_20240 PF08970 Sporulation inhibitor A CHR53_20245 PF02666 Phosphatidylserine decarboxylase CHR53_20250 PF01066 CDP-alcohol phosphatidyltransferase CHR53_20255 PF04542 Sigma-70 region 2 CHR53_20255 PF04545 Sigma-70, region 4 CHR53_20275 PF03060 Nitronate monooxygenase CHR53_20285 PF00378 Enoyl-CoA hydratase/isomerase CHR53_20290 PF00108 Thiolase, N-terminal domain CHR53_20290 PF02803 Thiolase, C-terminal domain CHR53_20295 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHR53_20295 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHR53_20300 PF00171 Aldehyde dehydrogenase family CHR53_20305 PF00378 Enoyl-CoA hydratase/isomerase CHR53_20310 PF00378 Enoyl-CoA hydratase/isomerase CHR53_20335 PF05138 Phenylacetic acid catabolic protein CHR53_20340 PF14535 AMP-binding enzyme C-terminal domain CHR53_20340 PF00501 AMP-binding enzyme CHR53_20350 PF09501 Probable sporulation protein (Bac_small_yrzI) CHR53_20355 PF09501 Probable sporulation protein (Bac_small_yrzI) CHR53_20365 PF01048 Phosphorylase superfamily CHR53_20370 PF07423 Domain of unknown function (DUF1510) CHR53_20375 PF00326 Prolyl oligopeptidase family CHR53_20375 PF07676 WD40-like Beta Propeller Repeat CHR53_20380 PF03717 Penicillin-binding Protein dimerisation domain CHR53_20380 PF00905 Penicillin binding protein transpeptidase domain CHR53_20385 PF03449 Transcription elongation factor, N-terminal CHR53_20385 PF01272 Transcription elongation factor, GreA/GreB, C-term CHR53_20390 PF00485 Phosphoribulokinase / Uridine kinase family CHR53_20410 PF02618 YceG-like family CHR53_20415 PF06949 Protein of unknown function (DUF1292) CHR53_20420 PF03652 Holliday junction resolvase CHR53_20425 PF06135 IreB regulatory phosphoprotein CHR53_20430 PF02272 DHHA1 domain CHR53_20430 PF01411 tRNA synthetases class II (A) CHR53_20430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHR53_20435 PF01594 AI-2E family transporter CHR53_20455 PF14490 Helix-hairpin-helix containing domain CHR53_20455 PF13538 UvrD-like helicase C-terminal domain CHR53_20455 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CHR53_20465 PF00324 Amino acid permease CHR53_20470 PF02817 e3 binding domain CHR53_20470 PF00364 Biotin-requiring enzyme CHR53_20470 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CHR53_20475 PF02780 Transketolase, C-terminal domain CHR53_20475 PF02779 Transketolase, pyrimidine binding domain CHR53_20480 PF00676 Dehydrogenase E1 component CHR53_20485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_20485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_20490 PF01037 Lrp/AsnC ligand binding domain CHR53_20500 PF00266 Aminotransferase class-V CHR53_20505 PF02082 Transcriptional regulator CHR53_20510 PF16193 AAA C-terminal domain CHR53_20510 PF12002 MgsA AAA+ ATPase C terminal CHR53_20510 PF05496 Holliday junction DNA helicase RuvB P-loop domain CHR53_20520 PF12679 ABC-2 family transporter protein CHR53_20525 PF00005 ABC transporter CHR53_20535 PF00899 ThiF family CHR53_20545 PF01336 OB-fold nucleic acid binding domain CHR53_20545 PF00152 tRNA synthetases class II (D, K and N) CHR53_20545 PF02938 GAD domain CHR53_20550 PF13393 Histidyl-tRNA synthetase CHR53_20550 PF03129 Anticodon binding domain CHR53_20560 PF01520 N-acetylmuramoyl-L-alanine amidase CHR53_20560 PF08239 Bacterial SH3 domain CHR53_20565 PF02580 D-Tyr-tRNA(Tyr) deacylase CHR53_20570 PF04607 Region found in RelA / SpoT proteins CHR53_20570 PF13291 ACT domain CHR53_20570 PF02824 TGS domain CHR53_20575 PF00156 Phosphoribosyl transferase domain CHR53_20580 PF17768 RecJ OB domain CHR53_20580 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CHR53_20580 PF02272 DHHA1 domain CHR53_20580 PF01368 DHH family CHR53_20585 PF02355 Protein export membrane protein CHR53_20585 PF07549 SecD/SecF GG Motif CHR53_20595 PF14667 Polysaccharide biosynthesis C-terminal domain CHR53_20595 PF01943 Polysaccharide biosynthesis protein CHR53_20600 PF04239 Protein of unknown function (DUF421) CHR53_20605 PF12670 Protein of unknown function (DUF3792) CHR53_20610 PF02699 Preprotein translocase subunit CHR53_20615 PF01702 Queuine tRNA-ribosyltransferase CHR53_20620 PF02547 Queuosine biosynthesis protein CHR53_20625 PF11146 Protein of unknown function (DUF2905) CHR53_20635 PF07499 RuvA, C-terminal domain CHR53_20635 PF01330 RuvA N terminal domain CHR53_20640 PF08955 BofC C-terminal domain CHR53_20640 PF08977 Bypass of Forespore C, N terminal CHR53_20660 PF08279 HTH domain CHR53_20660 PF02829 3H domain CHR53_20665 PF00800 Prephenate dehydratase CHR53_20665 PF01842 ACT domain CHR53_20670 PF01842 ACT domain CHR53_20675 PF01018 GTP1/OBG CHR53_20675 PF01926 50S ribosome-binding GTPase CHR53_20675 PF09269 Domain of unknown function (DUF1967) CHR53_20680 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CHR53_20680 PF14682 Sporulation initiation phospho-transferase B, C-terminal CHR53_20685 PF01016 Ribosomal L27 protein CHR53_20690 PF04327 Cysteine protease Prp CHR53_20695 PF00829 Ribosomal prokaryotic L21 protein CHR53_20700 PF10150 Ribonuclease E/G family CHR53_20700 PF00575 S1 RNA binding domain CHR53_20705 PF02163 Peptidase family M50 CHR53_20720 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CHR53_20725 PF03775 Septum formation inhibitor MinC, C-terminal domain CHR53_20735 PF04085 rod shape-determining protein MreC CHR53_20745 PF04002 RadC-like JAB domain CHR53_20750 PF02545 Maf-like protein CHR53_20775 PF06750 Bacterial Peptidase A24 N-terminal domain CHR53_20775 PF01478 Type IV leader peptidase family CHR53_20780 PF00114 Pilin (bacterial filament) CHR53_20780 PF07963 Prokaryotic N-terminal methylation motif CHR53_20785 PF00482 Type II secretion system (T2SS), protein F CHR53_20790 PF00437 Type II/IV secretion system protein CHR53_20795 PF00437 Type II/IV secretion system protein CHR53_20825 PF07694 5TMR of 5TMR-LYT CHR53_20825 PF00990 Diguanylate cyclase, GGDEF domain CHR53_20830 PF08245 Mur ligase middle domain CHR53_20830 PF02875 Mur ligase family, glutamate ligase domain CHR53_20835 PF00133 tRNA synthetases class I (I, L, M and V) CHR53_20835 PF10458 Valyl tRNA synthetase tRNA binding arm CHR53_20835 PF08264 Anticodon-binding domain of tRNA CHR53_20855 PF01476 LysM domain CHR53_20865 PF00202 Aminotransferase class-III CHR53_20870 PF00490 Delta-aminolevulinic acid dehydratase CHR53_20880 PF03900 Porphobilinogen deaminase, C-terminal domain CHR53_20880 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CHR53_20885 PF01578 Cytochrome C assembly protein CHR53_20890 PF01488 Shikimate / quinate 5-dehydrogenase CHR53_20890 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CHR53_20890 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CHR53_20900 PF01926 50S ribosome-binding GTPase CHR53_20905 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_20905 PF05362 Lon protease (S16) C-terminal proteolytic domain CHR53_20905 PF02190 ATP-dependent protease La (LON) substrate-binding domain CHR53_20910 PF00004 ATPase family associated with various cellular activities (AAA) CHR53_20910 PF05362 Lon protease (S16) C-terminal proteolytic domain CHR53_20915 PF07724 AAA domain (Cdc48 subfamily) CHR53_20915 PF10431 C-terminal, D2-small domain, of ClpB protein CHR53_20915 PF06689 ClpX C4-type zinc finger CHR53_20920 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CHR53_20920 PF05698 Bacterial trigger factor protein (TF) C-terminus CHR53_20920 PF05697 Bacterial trigger factor protein (TF) CHR53_20935 PF12850 Calcineurin-like phosphoesterase superfamily domain CHR53_20940 PF01725 Ham1 family CHR53_20945 PF03725 3' exoribonuclease family, domain 2 CHR53_20945 PF01138 3' exoribonuclease family, domain 1 CHR53_20950 PF10646 Sporulation and spore germination CHR53_20955 PF01177 Asp/Glu/Hydantoin racemase CHR53_20960 PF01047 MarR family CHR53_20965 PF00196 Bacterial regulatory proteins, luxR family CHR53_20970 PF03714 Bacterial pullanase-associated domain CHR53_20970 PF00128 Alpha amylase, catalytic domain CHR53_20970 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHR53_20975 PF04203 Sortase domain CHR53_20980 PF13183 4Fe-4S dicluster domain CHR53_20980 PF13085 2Fe-2S iron-sulfur cluster binding domain CHR53_20985 PF00890 FAD binding domain CHR53_20985 PF02910 Fumarate reductase flavoprotein C-term CHR53_20990 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CHR53_20995 PF10702 Protein of unknown function (DUF2507) CHR53_21000 PF13840 ACT domain CHR53_21000 PF00696 Amino acid kinase family CHR53_21005 PF01541 GIY-YIG catalytic domain CHR53_21005 PF02151 UvrB/uvrC motif CHR53_21005 PF08459 UvrC Helix-hairpin-helix N-terminal CHR53_21010 PF00085 Thioredoxin CHR53_21015 PF00766 Electron transfer flavoprotein FAD-binding domain CHR53_21015 PF01012 Electron transfer flavoprotein domain CHR53_21020 PF01012 Electron transfer flavoprotein domain CHR53_21025 PF00378 Enoyl-CoA hydratase/isomerase CHR53_21030 PF00440 Bacterial regulatory proteins, tetR family CHR53_21030 PF08359 YsiA-like protein, C-terminal region CHR53_21035 PF00501 AMP-binding enzyme CHR53_21035 PF13193 AMP-binding enzyme C-terminal domain CHR53_21045 PF03994 Domain of Unknown Function (DUF350) CHR53_21050 PF01713 Smr domain CHR53_21050 PF00488 MutS domain V CHR53_21055 PF14716 Helix-hairpin-helix domain CHR53_21055 PF02811 PHP domain CHR53_21055 PF14791 DNA polymerase beta thumb CHR53_21060 PF02674 Colicin V production protein CHR53_21065 PF05164 Cell division protein ZapA CHR53_21070 PF01351 Ribonuclease HII CHR53_21070 PF11858 Domain of unknown function (DUF3378) CHR53_21075 PF01329 Pterin 4 alpha carbinolamine dehydratase CHR53_21085 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CHR53_21085 PF01588 Putative tRNA binding domain CHR53_21085 PF03147 Ferredoxin-fold anticodon binding domain CHR53_21085 PF03484 tRNA synthetase B5 domain CHR53_21085 PF03483 B3/4 domain CHR53_21090 PF01409 tRNA synthetases class II core domain (F) CHR53_21090 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CHR53_21095 PF00588 SpoU rRNA Methylase family CHR53_21095 PF08032 RNA 2'-O ribose methyltransferase substrate binding CHR53_21100 PF14098 Small, acid-soluble spore protein I CHR53_21105 PF00474 Sodium:solute symporter family CHR53_21115 PF12833 Helix-turn-helix domain CHR53_21120 PF05343 M42 glutamyl aminopeptidase CHR53_21125 PF00582 Universal stress protein family CHR53_21130 PF00692 dUTPase CHR53_21140 PF00453 Ribosomal protein L20 CHR53_21145 PF01632 Ribosomal protein L35 CHR53_21150 PF05198 Translation initiation factor IF-3, N-terminal domain CHR53_21150 PF00707 Translation initiation factor IF-3, C-terminal domain CHR53_21155 PF03129 Anticodon binding domain CHR53_21155 PF02824 TGS domain CHR53_21155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CHR53_21155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHR53_21160 PF08812 YtxC-like family CHR53_21165 PF07319 Primosomal protein DnaI N-terminus CHR53_21165 PF01695 IstB-like ATP binding protein CHR53_21170 PF07261 Replication initiation and membrane attachment CHR53_21175 PF03477 ATP cone domain CHR53_21185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CHR53_21185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHR53_21190 PF01121 Dephospho-CoA kinase CHR53_21195 PF02659 Putative manganese efflux pump CHR53_21200 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CHR53_21200 PF06827 Zinc finger found in FPG and IleRS CHR53_21200 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CHR53_21205 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CHR53_21205 PF01367 5'-3' exonuclease, C-terminal SAM fold CHR53_21205 PF00476 DNA polymerase family A CHR53_21210 PF00512 His Kinase A (phospho-acceptor) domain CHR53_21210 PF16736 Single Cache-like CHR53_21210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_21210 PF00989 PAS fold CHR53_21215 PF00072 Response regulator receiver domain CHR53_21215 PF00486 Transcriptional regulatory protein, C terminal CHR53_21225 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CHR53_21225 PF00056 lactate/malate dehydrogenase, NAD binding domain CHR53_21230 PF00180 Isocitrate/isopropylmalate dehydrogenase CHR53_21235 PF00285 Citrate synthase, C-terminal domain CHR53_21240 PF01594 AI-2E family transporter CHR53_21245 PF02887 Pyruvate kinase, alpha/beta domain CHR53_21245 PF00391 PEP-utilising enzyme, mobile domain CHR53_21245 PF00224 Pyruvate kinase, barrel domain CHR53_21250 PF00365 Phosphofructokinase CHR53_21255 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CHR53_21260 PF17848 Acetyl-coA carboxylase zinc finger domain CHR53_21260 PF01039 Carboxyl transferase domain CHR53_21265 PF00392 Bacterial regulatory proteins, gntR family CHR53_21265 PF07729 FCD domain CHR53_21270 PF03949 Malic enzyme, NAD binding domain CHR53_21270 PF00390 Malic enzyme, N-terminal domain CHR53_21275 PF14579 Helix-hairpin-helix motif CHR53_21275 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CHR53_21275 PF02811 PHP domain CHR53_21275 PF01336 OB-fold nucleic acid binding domain CHR53_21275 PF07733 Bacterial DNA polymerase III alpha NTPase domain CHR53_21280 PF14034 Sporulation protein YtrH CHR53_21290 PF01368 DHH family CHR53_21290 PF02272 DHHA1 domain CHR53_21300 PF03061 Thioesterase superfamily CHR53_21300 PF00392 Bacterial regulatory proteins, gntR family CHR53_21300 PF07085 DRTGG domain CHR53_21300 PF00571 CBS domain CHR53_21315 PF00557 Metallopeptidase family M24 CHR53_21315 PF01321 Creatinase/Prolidase N-terminal domain CHR53_21325 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CHR53_21325 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CHR53_21330 PF00582 Universal stress protein family CHR53_21340 PF00994 Probable molybdopterin binding domain CHR53_21350 PF00871 Acetokinase family CHR53_21355 PF02384 N-6 DNA Methylase CHR53_21360 PF08534 Redoxin CHR53_21365 PF09579 Sporulation protein YtfJ (Spore_YtfJ) CHR53_21375 PF06271 RDD family CHR53_21380 PF01343 Peptidase family S49 CHR53_21385 PF01513 ATP-NAD kinase CHR53_21390 PF00892 EamA-like transporter family CHR53_21395 PF13193 AMP-binding enzyme C-terminal domain CHR53_21395 PF00501 AMP-binding enzyme CHR53_21400 PF00269 Small, acid-soluble spore proteins, alpha/beta type CHR53_21405 PF02926 THUMP domain CHR53_21405 PF02568 Thiamine biosynthesis protein (ThiI) CHR53_21410 PF00266 Aminotransferase class-V CHR53_21415 PF06160 Septation ring formation regulator, EzrA CHR53_21420 PF00440 Bacterial regulatory proteins, tetR family CHR53_21425 PF13185 GAF domain CHR53_21430 PF01053 Cys/Met metabolism PLP-dependent enzyme CHR53_21435 PF00163 Ribosomal protein S4/S9 N-terminal domain CHR53_21435 PF01479 S4 domain CHR53_21440 PF00905 Penicillin binding protein transpeptidase domain CHR53_21440 PF00912 Transglycosylase CHR53_21445 PF00579 tRNA synthetases class I (W and Y) CHR53_21445 PF01479 S4 domain CHR53_21450 PF00501 AMP-binding enzyme CHR53_21450 PF13193 AMP-binding enzyme C-terminal domain CHR53_21455 PF00583 Acetyltransferase (GNAT) family CHR53_21460 PF00571 CBS domain CHR53_21465 PF00850 Histone deacetylase domain CHR53_21470 PF00356 Bacterial regulatory proteins, lacI family CHR53_21475 PF01817 Chorismate mutase type II CHR53_21475 PF00793 DAHP synthetase I family CHR53_21480 PF11009 Protein of unknown function (DUF2847) CHR53_21485 PF12732 YtxH-like protein CHR53_21490 PF06103 Bacterial protein of unknown function (DUF948) CHR53_21495 PF01225 Mur ligase family, catalytic domain CHR53_21495 PF02875 Mur ligase family, glutamate ligase domain CHR53_21495 PF08245 Mur ligase middle domain CHR53_21500 PF17854 FtsK alpha domain CHR53_21500 PF09397 Ftsk gamma domain CHR53_21500 PF01580 FtsK/SpoIIIE family CHR53_21505 PF07285 Protein of unknown function (DUF1444) CHR53_21510 PF00085 Thioredoxin CHR53_21515 PF01931 Protein of unknown function DUF84 CHR53_21520 PF05343 M42 glutamyl aminopeptidase CHR53_21530 PF00753 Metallo-beta-lactamase superfamily CHR53_21535 PF02390 Putative methyltransferase CHR53_21540 PF14165 YtzH-like protein CHR53_21545 PF01636 Phosphotransferase enzyme family CHR53_21550 PF17999 Pullulanase N1-terminal domain CHR53_21550 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHR53_21550 PF00128 Alpha amylase, catalytic domain CHR53_21555 PF02834 LigT like Phosphoesterase CHR53_21560 PF01063 Amino-transferase class IV CHR53_21565 PF01546 Peptidase family M20/M25/M40 CHR53_21570 PF08220 DeoR-like helix-turn-helix domain CHR53_21575 PF00324 Amino acid permease CHR53_21590 PF02463 RecF/RecN/SMC N terminal domain CHR53_21595 PF02675 S-adenosylmethionine decarboxylase CHR53_21605 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHR53_21605 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHR53_21610 PF00561 alpha/beta hydrolase fold CHR53_21615 PF00849 RNA pseudouridylate synthase CHR53_21615 PF01479 S4 domain CHR53_21620 PF14667 Polysaccharide biosynthesis C-terminal domain CHR53_21620 PF01943 Polysaccharide biosynthesis protein CHR53_21630 PF10957 Sporulation protein Cse60 CHR53_21640 PF00581 Rhodanese-like domain CHR53_21645 PF08264 Anticodon-binding domain of tRNA CHR53_21645 PF00133 tRNA synthetases class I (I, L, M and V) CHR53_21645 PF09334 tRNA synthetases class I (M) CHR53_21645 PF13603 Leucyl-tRNA synthetase, Domain 2 CHR53_21650 PF07690 Major Facilitator Superfamily CHR53_21655 PF02335 Cytochrome c552 CHR53_21670 PF10732 Protein of unknown function (DUF2524) CHR53_21675 PF04055 Radical SAM superfamily CHR53_21675 PF16199 Radical_SAM C-terminal domain CHR53_21680 PF06962 Putative rRNA methylase CHR53_21685 PF10776 Protein of unknown function (DUF2600) CHR53_21690 PF12146 Serine aminopeptidase, S33 CHR53_21695 PF00733 Asparagine synthase CHR53_21695 PF13537 Glutamine amidotransferase domain CHR53_21700 PF00438 S-adenosylmethionine synthetase, N-terminal domain CHR53_21700 PF02772 S-adenosylmethionine synthetase, central domain CHR53_21700 PF02773 S-adenosylmethionine synthetase, C-terminal domain CHR53_21705 PF01293 Phosphoenolpyruvate carboxykinase CHR53_21710 PF10763 Protein of unknown function (DUF2584) CHR53_21715 PF00326 Prolyl oligopeptidase family CHR53_21725 PF00005 ABC transporter CHR53_21730 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_21755 PF01809 Putative membrane protein insertion efficiency factor CHR53_21760 PF00484 Carbonic anhydrase CHR53_21765 PF01297 Zinc-uptake complex component A periplasmic CHR53_21765 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment CHR53_21770 PF07561 Domain of Unknown Function (DUF1540) CHR53_21775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_21775 PF13378 Enolase C-terminal domain-like CHR53_21780 PF00501 AMP-binding enzyme CHR53_21780 PF13193 AMP-binding enzyme C-terminal domain CHR53_21785 PF00378 Enoyl-CoA hydratase/isomerase CHR53_21790 PF00561 alpha/beta hydrolase fold CHR53_21795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_21795 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_21795 PF16582 Middle domain of thiamine pyrophosphate CHR53_21800 PF00425 chorismate binding enzyme CHR53_21805 PF01040 UbiA prenyltransferase family CHR53_21810 PF00343 Carbohydrate phosphorylase CHR53_21815 PF00534 Glycosyl transferases group 1 CHR53_21815 PF08323 Starch synthase catalytic domain CHR53_21820 PF00483 Nucleotidyl transferase CHR53_21825 PF00483 Nucleotidyl transferase CHR53_21830 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CHR53_21830 PF00128 Alpha amylase, catalytic domain CHR53_21830 PF02806 Alpha amylase, C-terminal all-beta domain CHR53_21955 PF02308 MgtC family CHR53_21965 PF01321 Creatinase/Prolidase N-terminal domain CHR53_21965 PF00557 Metallopeptidase family M24 CHR53_21975 PF01235 Sodium:alanine symporter family CHR53_21980 PF05544 Proline racemase CHR53_21985 PF05544 Proline racemase CHR53_21990 PF01266 FAD dependent oxidoreductase CHR53_21995 PF02954 Bacterial regulatory protein, Fis family CHR53_21995 PF00989 PAS fold CHR53_21995 PF00158 Sigma-54 interaction domain CHR53_22000 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22000 PF04324 BFD-like [2Fe-2S] binding domain CHR53_22005 PF17806 Sarcosine oxidase A3 domain CHR53_22005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22005 PF08669 Glycine cleavage T-protein C-terminal barrel domain CHR53_22005 PF01571 Aminomethyltransferase folate-binding domain CHR53_22010 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22010 PF04324 BFD-like [2Fe-2S] binding domain CHR53_22015 PF00271 Helicase conserved C-terminal domain CHR53_22015 PF00270 DEAD/DEAH box helicase CHR53_22025 PF01717 Cobalamin-independent synthase, Catalytic domain CHR53_22025 PF08267 Cobalamin-independent synthase, N-terminal domain CHR53_22040 PF01206 Sulfurtransferase TusA CHR53_22040 PF11823 Protein of unknown function (DUF3343) CHR53_22045 PF03466 LysR substrate binding domain CHR53_22045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_22055 PF07875 Coat F domain CHR53_22070 PF07875 Coat F domain CHR53_22075 PF00501 AMP-binding enzyme CHR53_22075 PF13193 AMP-binding enzyme C-terminal domain CHR53_22085 PF03707 Bacterial signalling protein N terminal repeat CHR53_22085 PF00990 Diguanylate cyclase, GGDEF domain CHR53_22085 PF00563 EAL domain CHR53_22090 PF00266 Aminotransferase class-V CHR53_22095 PF08544 GHMP kinases C terminal CHR53_22095 PF00288 GHMP kinases N terminal domain CHR53_22100 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_22105 PF00742 Homoserine dehydrogenase CHR53_22105 PF01842 ACT domain CHR53_22105 PF03447 Homoserine dehydrogenase, NAD binding domain CHR53_22110 PF01842 ACT domain CHR53_22110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_22110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_22120 PF00171 Aldehyde dehydrogenase family CHR53_22125 PF00202 Aminotransferase class-III CHR53_22130 PF00202 Aminotransferase class-III CHR53_22155 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_22155 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_22160 PF00324 Amino acid permease CHR53_22165 PF00324 Amino acid permease CHR53_22170 PF07486 Cell Wall Hydrolase CHR53_22175 PF00210 Ferritin-like domain CHR53_22180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22185 PF00860 Permease family CHR53_22190 PF02600 Disulfide bond formation protein DsbB CHR53_22195 PF13462 Thioredoxin CHR53_22210 PF00455 DeoR C terminal sensor domain CHR53_22210 PF08220 DeoR-like helix-turn-helix domain CHR53_22215 PF00596 Class II Aldolase and Adducin N-terminal domain CHR53_22220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_22220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_22225 PF02952 L-fucose isomerase, C-terminal domain CHR53_22225 PF07881 L-fucose isomerase, first N-terminal domain CHR53_22225 PF07882 L-fucose isomerase, second N-terminal domain CHR53_22230 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_22230 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_22235 PF00596 Class II Aldolase and Adducin N-terminal domain CHR53_22240 PF00106 short chain dehydrogenase CHR53_22250 PF02653 Branched-chain amino acid transport system / permease component CHR53_22255 PF00005 ABC transporter CHR53_22260 PF08220 DeoR-like helix-turn-helix domain CHR53_22260 PF00455 DeoR C terminal sensor domain CHR53_22265 PF05025 RbsD / FucU transport protein family CHR53_22270 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_22270 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_22275 PF00923 Transaldolase/Fructose-6-phosphate aldolase CHR53_22280 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CHR53_22280 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHR53_22285 PF10282 Lactonase, 7-bladed beta-propeller CHR53_22290 PF02397 Bacterial sugar transferase CHR53_22295 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CHR53_22295 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CHR53_22295 PF02142 MGS-like domain CHR53_22310 PF00535 Glycosyl transferase family 2 CHR53_22315 PF00534 Glycosyl transferases group 1 CHR53_22315 PF13439 Glycosyltransferase Family 4 CHR53_22320 PF03023 Lipid II flippase MurJ CHR53_22335 PF13614 AAA domain CHR53_22340 PF02706 Chain length determinant protein CHR53_22340 PF13807 G-rich domain on putative tyrosine kinase CHR53_22345 PF01381 Helix-turn-helix CHR53_22345 PF08671 Anti-repressor SinI CHR53_22350 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CHR53_22355 PF02719 Polysaccharide biosynthesis protein CHR53_22360 PF01053 Cys/Met metabolism PLP-dependent enzyme CHR53_22365 PF01053 Cys/Met metabolism PLP-dependent enzyme CHR53_22370 PF02219 Methylenetetrahydrofolate reductase CHR53_22370 PF02574 Homocysteine S-methyltransferase CHR53_22375 PF02310 B12 binding domain CHR53_22375 PF02607 B12 binding domain CHR53_22375 PF02574 Homocysteine S-methyltransferase CHR53_22375 PF00809 Pterin binding enzyme CHR53_22375 PF02965 Vitamin B12 dependent methionine synthase, activation domain CHR53_22385 PF07690 Major Facilitator Superfamily CHR53_22395 PF02626 Carboxyltransferase domain, subdomain A and B CHR53_22400 PF03746 LamB/YcsF family CHR53_22405 PF02682 Carboxyltransferase domain, subdomain C and D CHR53_22410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22415 PF07690 Major Facilitator Superfamily CHR53_22430 PF00082 Subtilase family CHR53_22440 PF01545 Cation efflux family CHR53_22440 PF16916 Dimerisation domain of Zinc Transporter CHR53_22450 PF01258 Prokaryotic dksA/traR C4-type zinc finger CHR53_22455 PF00324 Amino acid permease CHR53_22460 PF01810 LysE type translocator CHR53_22470 PF00535 Glycosyl transferase family 2 CHR53_22480 PF02254 TrkA-N domain CHR53_22480 PF07885 Ion channel CHR53_22485 PF00381 PTS HPr component phosphorylation site CHR53_22490 PF00342 Phosphoglucose isomerase CHR53_22495 PF00465 Iron-containing alcohol dehydrogenase CHR53_22500 PF04070 Domain of unknown function (DUF378) CHR53_22505 PF00202 Aminotransferase class-III CHR53_22510 PF00575 S1 RNA binding domain CHR53_22515 PF01381 Helix-turn-helix CHR53_22525 PF00155 Aminotransferase class I and II CHR53_22530 PF08000 Bacterial PH domain CHR53_22535 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CHR53_22535 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHR53_22540 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CHR53_22540 PF01411 tRNA synthetases class II (A) CHR53_22540 PF02272 DHHA1 domain CHR53_22550 PF00080 Copper/zinc superoxide dismutase (SODC) CHR53_22560 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CHR53_22565 PF08810 Kinase associated protein B CHR53_22570 PF00929 Exonuclease CHR53_22575 PF03061 Thioesterase superfamily CHR53_22585 PF00883 Cytosol aminopeptidase family, catalytic domain CHR53_22585 PF02789 Cytosol aminopeptidase family, N-terminal domain CHR53_22595 PF06725 3D domain CHR53_22600 PF14068 Putative membrane protein CHR53_22605 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22610 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22615 PF01521 Iron-sulphur cluster biosynthesis CHR53_22620 PF07293 Protein of unknown function (DUF1450) CHR53_22625 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_22630 PF07315 Protein of unknown function (DUF1462) CHR53_22635 PF01106 NifU-like domain CHR53_22640 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_22640 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_22650 PF04608 Phosphatidylglycerophosphatase A CHR53_22655 PF13344 Haloacid dehalogenase-like hydrolase CHR53_22660 PF01934 Protein of unknown function DUF86 CHR53_22665 PF00563 EAL domain CHR53_22665 PF00990 Diguanylate cyclase, GGDEF domain CHR53_22665 PF03707 Bacterial signalling protein N terminal repeat CHR53_22665 PF13188 PAS domain CHR53_22680 PF06265 Protein of unknown function (DUF1027) CHR53_22685 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) CHR53_22690 PF04055 Radical SAM superfamily CHR53_22690 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family CHR53_22695 PF01551 Peptidase family M23 CHR53_22700 PF09560 Sporulation protein YunB (Spo_YunB) CHR53_22705 PF08827 Domain of unknown function (DUF1805) CHR53_22710 PF02872 5'-nucleotidase, C-terminal domain CHR53_22715 PF01925 Sulfite exporter TauE/SafE CHR53_22720 PF01904 Protein of unknown function DUF72 CHR53_22725 PF01458 Uncharacterized protein family (UPF0051) CHR53_22730 PF01592 NifU-like N terminal domain CHR53_22735 PF00266 Aminotransferase class-V CHR53_22740 PF01458 Uncharacterized protein family (UPF0051) CHR53_22745 PF00005 ABC transporter CHR53_22750 PF03180 NLPA lipoprotein CHR53_22755 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_22760 PF09383 NIL domain CHR53_22760 PF00005 ABC transporter CHR53_22765 PF01053 Cys/Met metabolism PLP-dependent enzyme CHR53_22775 PF07690 Major Facilitator Superfamily CHR53_22785 PF00085 Thioredoxin CHR53_22790 PF01751 Toprim domain CHR53_22795 PF01597 Glycine cleavage H-protein CHR53_22800 PF03960 ArsC family CHR53_22805 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_22805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_22805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_22810 PF02803 Thiolase, C-terminal domain CHR53_22810 PF00108 Thiolase, N-terminal domain CHR53_22815 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHR53_22815 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHR53_22815 PF00378 Enoyl-CoA hydratase/isomerase CHR53_22820 PF14115 YuzL-like protein CHR53_22825 PF10835 Protein of unknown function (DUF2573) CHR53_22830 PF01235 Sodium:alanine symporter family CHR53_22835 PF01098 Cell cycle protein CHR53_22845 PF02673 Bacitracin resistance protein BacA CHR53_22850 PF02525 Flavodoxin-like fold CHR53_22855 PF12727 PBP superfamily domain CHR53_22855 PF12728 Helix-turn-helix domain CHR53_22860 PF12849 PBP superfamily domain CHR53_22865 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_22870 PF08402 TOBE domain CHR53_22870 PF00005 ABC transporter CHR53_22875 PF00106 short chain dehydrogenase CHR53_22880 PF00512 His Kinase A (phospho-acceptor) domain CHR53_22880 PF00672 HAMP domain CHR53_22880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_22885 PF00486 Transcriptional regulatory protein, C terminal CHR53_22885 PF00072 Response regulator receiver domain CHR53_22890 PF00155 Aminotransferase class I and II CHR53_22890 PF00392 Bacterial regulatory proteins, gntR family CHR53_22895 PF00892 EamA-like transporter family CHR53_22900 PF01145 SPFH domain / Band 7 family CHR53_22900 PF15975 Flotillin CHR53_22910 PF00005 ABC transporter CHR53_22915 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_22920 PF00497 Bacterial extracellular solute-binding proteins, family 3 CHR53_22930 PF02540 NAD synthase CHR53_22935 PF03061 Thioesterase superfamily CHR53_22955 PF01594 AI-2E family transporter CHR53_22960 PF01522 Polysaccharide deacetylase CHR53_22975 PF01381 Helix-turn-helix CHR53_22975 PF08671 Anti-repressor SinI CHR53_22990 PF00437 Type II/IV secretion system protein CHR53_22995 PF10609 NUBPL iron-transfer P-loop NTPase CHR53_23025 PF13520 Amino acid permease CHR53_23030 PF07875 Coat F domain CHR53_23035 PF02632 BioY family CHR53_23040 PF00202 Aminotransferase class-III CHR53_23050 PF01717 Cobalamin-independent synthase, Catalytic domain CHR53_23050 PF08267 Cobalamin-independent synthase, N-terminal domain CHR53_23060 PF04239 Protein of unknown function (DUF421) CHR53_23075 PF01668 SmpB protein CHR53_23080 PF00575 S1 RNA binding domain CHR53_23080 PF17876 Cold shock domain CHR53_23080 PF08206 Ribonuclease B OB domain CHR53_23080 PF00773 RNB domain CHR53_23085 PF12146 Serine aminopeptidase, S33 CHR53_23090 PF03840 Preprotein translocase SecG subunit CHR53_23100 PF00113 Enolase, C-terminal TIM barrel domain CHR53_23100 PF03952 Enolase, N-terminal domain CHR53_23105 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CHR53_23105 PF01676 Metalloenzyme superfamily CHR53_23110 PF00121 Triosephosphate isomerase CHR53_23115 PF00162 Phosphoglycerate kinase CHR53_23120 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CHR53_23120 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CHR53_23125 PF04198 Putative sugar-binding domain CHR53_23135 PF04552 Sigma-54, DNA binding domain CHR53_23135 PF00309 Sigma-54 factor, Activator interacting domain (AID) CHR53_23135 PF04963 Sigma-54 factor, core binding domain CHR53_23145 PF00574 Clp protease CHR53_23150 PF00381 PTS HPr component phosphorylation site CHR53_23155 PF10298 WhiA N-terminal LAGLIDADG-like domain CHR53_23155 PF14527 WhiA LAGLIDADG-like domain CHR53_23155 PF02650 WhiA C-terminal HTH domain CHR53_23160 PF01933 Uncharacterised protein family UPF0052 CHR53_23165 PF03668 P-loop ATPase protein family CHR53_23170 PF00293 NUDIX domain CHR53_23175 PF07992 Pyridine nucleotide-disulphide oxidoreductase CHR53_23185 PF01502 Phosphoribosyl-AMP cyclohydrolase CHR53_23185 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CHR53_23190 PF00977 Histidine biosynthesis protein CHR53_23195 PF00977 Histidine biosynthesis protein CHR53_23200 PF00117 Glutamine amidotransferase class-I CHR53_23205 PF00475 Imidazoleglycerol-phosphate dehydratase CHR53_23210 PF00815 Histidinol dehydrogenase CHR53_23215 PF01634 ATP phosphoribosyltransferase CHR53_23220 PF13393 Histidyl-tRNA synthetase CHR53_23230 PF14602 Hexapeptide repeat of succinyl-transferase CHR53_23235 PF13419 Haloacid dehalogenase-like hydrolase CHR53_23240 PF07670 Nucleoside recognition CHR53_23245 PF01790 Prolipoprotein diacylglyceryl transferase CHR53_23250 PF02603 HPr Serine kinase N terminus CHR53_23250 PF07475 HPr Serine kinase C-terminal domain CHR53_23255 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV CHR53_23260 PF13349 Putative adhesin CHR53_23275 PF17760 UvrA interaction domain CHR53_23275 PF00005 ABC transporter CHR53_23275 PF17755 UvrA DNA-binding domain CHR53_23280 PF00271 Helicase conserved C-terminal domain CHR53_23280 PF04851 Type III restriction enzyme, res subunit CHR53_23280 PF02151 UvrB/uvrC motif CHR53_23280 PF12344 Ultra-violet resistance protein B CHR53_23280 PF17757 UvrB interaction domain CHR53_23285 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) CHR53_23290 PF00474 Sodium:solute symporter family CHR53_23295 PF06196 Protein of unknown function (DUF997) CHR53_23300 PF16916 Dimerisation domain of Zinc Transporter CHR53_23300 PF01545 Cation efflux family CHR53_23305 PF08241 Methyltransferase domain CHR53_23310 PF01022 Bacterial regulatory protein, arsR family CHR53_23315 PF09844 Uncharacterized conserved protein (COG2071) CHR53_23325 PF02322 Cytochrome bd terminal oxidase subunit II CHR53_23330 PF01654 Cytochrome bd terminal oxidase subunit I CHR53_23340 PF01804 Penicillin amidase CHR53_23350 PF00005 ABC transporter CHR53_23365 PF00440 Bacterial regulatory proteins, tetR family CHR53_23370 PF00963 Cohesin domain CHR53_23370 PF00754 F5/8 type C domain CHR53_23370 PF00041 Fibronectin type III domain CHR53_23370 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_23370 PF07555 beta-N-acetylglucosaminidase CHR53_23375 PF17820 PDZ domain CHR53_23380 PF01471 Putative peptidoglycan binding domain CHR53_23380 PF03572 Peptidase family S41 CHR53_23380 PF17820 PDZ domain CHR53_23385 PF00877 NlpC/P60 family CHR53_23390 PF02687 FtsX-like permease family CHR53_23390 PF18075 FtsX extracellular domain CHR53_23395 PF00005 ABC transporter CHR53_23400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_23405 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_23405 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_23445 PF07516 SecA Wing and Scaffold domain CHR53_23445 PF01043 SecA preprotein cross-linking domain CHR53_23445 PF07517 SecA DEAD-like domain CHR53_23445 PF02810 SEC-C motif CHR53_23455 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CHR53_23455 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CHR53_23460 PF07875 Coat F domain CHR53_23465 PF00156 Phosphoribosyl transferase domain CHR53_23470 PF00271 Helicase conserved C-terminal domain CHR53_23470 PF04851 Type III restriction enzyme, res subunit CHR53_23490 PF02645 Uncharacterised protein, DegV family COG1307 CHR53_23495 PF00072 Response regulator receiver domain CHR53_23495 PF00196 Bacterial regulatory proteins, luxR family CHR53_23500 PF07730 Histidine kinase CHR53_23500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_23500 PF05384 Sensor protein DegS CHR53_23505 PF01205 Uncharacterized protein family UPF0029 CHR53_23505 PF09186 Domain of unknown function (DUF1949) CHR53_23510 PF03816 Cell envelope-related transcriptional attenuator domain CHR53_23520 PF00953 Glycosyl transferase family 4 CHR53_23525 PF03808 Glycosyl transferase WecB/TagA/CpsF family CHR53_23530 PF00005 ABC transporter CHR53_23535 PF01061 ABC-2 type transporter CHR53_23540 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHR53_23545 PF01467 Cytidylyltransferase-like CHR53_23555 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHR53_23560 PF08239 Bacterial SH3 domain CHR53_23560 PF05036 Sporulation related domain CHR53_23560 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CHR53_23565 PF03275 UDP-galactopyranose mutase CHR53_23570 PF00535 Glycosyl transferase family 2 CHR53_23585 PF00483 Nucleotidyl transferase CHR53_23590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHR53_23595 PF00535 Glycosyl transferase family 2 CHR53_23595 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHR53_23600 PF00534 Glycosyl transferases group 1 CHR53_23600 PF13439 Glycosyltransferase Family 4 CHR53_23605 PF00535 Glycosyl transferase family 2 CHR53_23605 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CHR53_23625 PF02872 5'-nucleotidase, C-terminal domain CHR53_23625 PF00149 Calcineurin-like phosphoesterase CHR53_23630 PF03816 Cell envelope-related transcriptional attenuator domain CHR53_23635 PF00082 Subtilase family CHR53_23635 PF05922 Peptidase inhibitor I9 CHR53_23640 PF03734 L,D-transpeptidase catalytic domain CHR53_23645 PF02872 5'-nucleotidase, C-terminal domain CHR53_23645 PF00149 Calcineurin-like phosphoesterase CHR53_23655 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHR53_23655 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHR53_23655 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHR53_23665 PF07732 Multicopper oxidase CHR53_23670 PF02557 D-alanyl-D-alanine carboxypeptidase CHR53_23675 PF05816 Toxic anion resistance protein (TelA) CHR53_23680 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein CHR53_23690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_23695 PF02350 UDP-N-acetylglucosamine 2-epimerase CHR53_23700 PF02535 ZIP Zinc transporter CHR53_23705 PF02660 Glycerol-3-phosphate acyltransferase CHR53_23710 PF01078 Magnesium chelatase, subunit ChlI CHR53_23710 PF13335 Magnesium chelatase, subunit ChlI C-terminal CHR53_23725 PF02915 Rubrerythrin CHR53_23735 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_23735 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_23735 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_23745 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_23745 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_23755 PF00005 ABC transporter CHR53_23755 PF00571 CBS domain CHR53_23760 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_23765 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CHR53_23770 PF00149 Calcineurin-like phosphoesterase CHR53_23770 PF02872 5'-nucleotidase, C-terminal domain CHR53_23785 PF01476 LysM domain CHR53_23785 PF06725 3D domain CHR53_23790 PF16363 GDP-mannose 4,6 dehydratase CHR53_23795 PF05036 Sporulation related domain CHR53_23795 PF01520 N-acetylmuramoyl-L-alanine amidase CHR53_23805 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CHR53_23810 PF00860 Permease family CHR53_23815 PF04892 VanZ like family CHR53_23825 PF00107 Zinc-binding dehydrogenase CHR53_23825 PF08240 Alcohol dehydrogenase GroES-like domain CHR53_23840 PF00999 Sodium/hydrogen exchanger family CHR53_23860 PF00892 EamA-like transporter family CHR53_23865 PF00483 Nucleotidyl transferase CHR53_23895 PF03932 CutC family CHR53_23925 PF02378 Phosphotransferase system, EIIC CHR53_23925 PF00367 phosphotransferase system, EIIB CHR53_23930 PF01380 SIS domain CHR53_23930 PF01418 Helix-turn-helix domain, rpiR family CHR53_23935 PF01380 SIS domain CHR53_23945 PF05651 Putative sugar diacid recognition CHR53_23945 PF17853 GGDEF-like domain CHR53_23945 PF13556 PucR C-terminal helix-turn-helix domain CHR53_23955 PF02913 FAD linked oxidases, C-terminal domain CHR53_23955 PF01565 FAD binding domain CHR53_23960 PF13183 4Fe-4S dicluster domain CHR53_23960 PF02754 Cysteine-rich domain CHR53_23970 PF01380 SIS domain CHR53_23970 PF01418 Helix-turn-helix domain, rpiR family CHR53_23975 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CHR53_23980 PF00367 phosphotransferase system, EIIB CHR53_23980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CHR53_23980 PF02378 Phosphotransferase system, EIIC CHR53_23985 PF13457 GW (Gly-Tryp) dipeptide domain CHR53_23985 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CHR53_23990 PF05901 Excalibur calcium-binding domain CHR53_24000 PF02872 5'-nucleotidase, C-terminal domain CHR53_24000 PF00149 Calcineurin-like phosphoesterase CHR53_24005 PF16363 GDP-mannose 4,6 dehydratase CHR53_24010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CHR53_24020 PF01791 DeoC/LacD family aldolase CHR53_24025 PF00294 pfkB family carbohydrate kinase CHR53_24030 PF01979 Amidohydrolase family CHR53_24035 PF01380 SIS domain CHR53_24040 PF00480 ROK family CHR53_24045 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24050 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24055 PF01547 Bacterial extracellular solute-binding protein CHR53_24065 PF00356 Bacterial regulatory proteins, lacI family CHR53_24075 PF00144 Beta-lactamase CHR53_24080 PF01915 Glycosyl hydrolase family 3 C-terminal domain CHR53_24080 PF00933 Glycosyl hydrolase family 3 N terminal domain CHR53_24085 PF07075 Protein of unknown function (DUF1343) CHR53_24095 PF13860 FlgD Ig-like domain CHR53_24095 PF02225 PA domain CHR53_24095 PF05922 Peptidase inhibitor I9 CHR53_24095 PF00082 Subtilase family CHR53_24220 PF00005 ABC transporter CHR53_24220 PF12558 ATP-binding cassette cobalt transporter CHR53_24225 PF07155 ECF-type riboflavin transporter, S component CHR53_24235 PF18277 AbrB C-terminal domain CHR53_24235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CHR53_24240 PF13187 4Fe-4S dicluster domain CHR53_24240 PF01645 Conserved region in glutamate synthase CHR53_24245 PF13187 4Fe-4S dicluster domain CHR53_24245 PF01645 Conserved region in glutamate synthase CHR53_24250 PF01638 HxlR-like helix-turn-helix CHR53_24255 PF08240 Alcohol dehydrogenase GroES-like domain CHR53_24255 PF00107 Zinc-binding dehydrogenase CHR53_24265 PF07690 Major Facilitator Superfamily CHR53_24270 PF01565 FAD binding domain CHR53_24280 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHR53_24280 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHR53_24280 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHR53_24285 PF00483 Nucleotidyl transferase CHR53_24290 PF00535 Glycosyl transferase family 2 CHR53_24295 PF00005 ABC transporter CHR53_24305 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CHR53_24315 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) CHR53_24315 PF12708 Pectate lyase superfamily protein CHR53_24315 PF13229 Right handed beta helix region CHR53_24320 PF00873 AcrB/AcrD/AcrF family CHR53_24325 PF00440 Bacterial regulatory proteins, tetR family CHR53_24330 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_24340 PF03845 Spore germination protein CHR53_24345 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_24355 PF09844 Uncharacterized conserved protein (COG2071) CHR53_24360 PF17974 Galactose-binding domain-like CHR53_24360 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal CHR53_24360 PF04650 YSIRK type signal peptide CHR53_24360 PF12905 Endo-alpha-N-acetylgalactosaminidase CHR53_24360 PF18080 Galactose mutarotase-like fold domain CHR53_24360 PF00754 F5/8 type C domain CHR53_24360 PF17451 Glycosyl hydrolase 101 beta sandwich domain CHR53_24365 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24370 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24385 PF13802 Galactose mutarotase-like CHR53_24385 PF01055 Glycosyl hydrolases family 31 CHR53_24390 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain CHR53_24390 PF17386 Lacto-N-biose phosphorylase C-terminal domain CHR53_24390 PF17385 Lacto-N-biose phosphorylase central domain CHR53_24395 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24400 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_24405 PF01547 Bacterial extracellular solute-binding protein CHR53_24410 PF12833 Helix-turn-helix domain CHR53_24420 PF03845 Spore germination protein CHR53_24425 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_24430 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CHR53_24435 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CHR53_24440 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_24445 PF07729 FCD domain CHR53_24445 PF00392 Bacterial regulatory proteins, gntR family CHR53_24450 PF02615 Malate/L-lactate dehydrogenase CHR53_24455 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CHR53_24465 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_24465 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_24470 PF03009 Glycerophosphoryl diester phosphodiesterase family CHR53_24475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_24475 PF03466 LysR substrate binding domain CHR53_24480 PF03061 Thioesterase superfamily CHR53_24495 PF02525 Flavodoxin-like fold CHR53_24530 PF00501 AMP-binding enzyme CHR53_24530 PF13193 AMP-binding enzyme C-terminal domain CHR53_24545 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CHR53_24555 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_24560 PF01614 Bacterial transcriptional regulator CHR53_24560 PF09339 IclR helix-turn-helix domain CHR53_24565 PF01758 Sodium Bile acid symporter family CHR53_24580 PF04539 Sigma-70 region 3 CHR53_24580 PF04542 Sigma-70 region 2 CHR53_24580 PF04545 Sigma-70, region 4 CHR53_24585 PF10609 NUBPL iron-transfer P-loop NTPase CHR53_24590 PF00448 SRP54-type protein, GTPase domain CHR53_24595 PF00771 FHIPEP family CHR53_24600 PF01312 FlhB HrpN YscU SpaS Family CHR53_24605 PF01311 Bacterial export proteins, family 1 CHR53_24610 PF01313 Bacterial export proteins, family 3 CHR53_24615 PF00813 FliP family CHR53_24620 PF04347 Flagellar biosynthesis protein, FliO CHR53_24625 PF04509 CheC-like family CHR53_24625 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHR53_24635 PF18269 T3SS EscN ATPase C-terminal domain CHR53_24635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHR53_24635 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHR53_24640 PF02108 Flagellar assembly protein FliH CHR53_24645 PF01706 FliG C-terminal domain CHR53_24645 PF14841 FliG middle domain CHR53_24645 PF14842 FliG N-terminal domain CHR53_24650 PF01514 Secretory protein of YscJ/FliF family CHR53_24650 PF08345 Flagellar M-ring protein C-terminal CHR53_24655 PF02049 Flagellar hook-basal body complex protein FliE CHR53_24660 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24660 PF00460 Flagella basal body rod protein CHR53_24665 PF00460 Flagella basal body rod protein CHR53_24670 PF02561 Flagellar protein FliS CHR53_24680 PF04509 CheC-like family CHR53_24680 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHR53_24685 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CHR53_24685 PF02154 Flagellar motor switch protein FliM CHR53_24690 PF00460 Flagella basal body rod protein CHR53_24690 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24695 PF03963 Flagellar hook capping protein - N-terminal region CHR53_24710 PF07195 Flagellar hook-associated protein 2 C-terminus CHR53_24710 PF02465 Flagellar hook-associated protein 2 N-terminus CHR53_24710 PF07196 Flagellin hook IN motif CHR53_24720 PF00669 Bacterial flagellin N-terminal helical region CHR53_24720 PF00700 Bacterial flagellin C-terminal helical region CHR53_24730 PF00669 Bacterial flagellin N-terminal helical region CHR53_24730 PF00700 Bacterial flagellin C-terminal helical region CHR53_24735 PF00872 Transposase, Mutator family CHR53_24740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24740 PF07196 Flagellin hook IN motif CHR53_24740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24740 PF07196 Flagellin hook IN motif CHR53_24755 PF00460 Flagella basal body rod protein CHR53_24755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CHR53_24760 PF00460 Flagella basal body rod protein CHR53_24765 PF03885 Protein of unknown function (DUF327) CHR53_24770 PF01618 MotA/TolQ/ExbB proton channel family CHR53_24775 PF00691 OmpA family CHR53_24775 PF13677 Membrane MotB of proton-channel complex MotA/MotB CHR53_24785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CHR53_24785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CHR53_24790 PF01261 Xylose isomerase-like TIM barrel CHR53_24795 PF13458 Periplasmic binding protein CHR53_24800 PF02653 Branched-chain amino acid transport system / permease component CHR53_24805 PF02653 Branched-chain amino acid transport system / permease component CHR53_24805 PF11862 Domain of unknown function (DUF3382) CHR53_24810 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_24810 PF00005 ABC transporter CHR53_24815 PF00005 ABC transporter CHR53_24825 PF01910 Thiamine-binding protein CHR53_24830 PF03816 Cell envelope-related transcriptional attenuator domain CHR53_24835 PF07969 Amidohydrolase family CHR53_24845 PF00474 Sodium:solute symporter family CHR53_24860 PF00158 Sigma-54 interaction domain CHR53_24860 PF02954 Bacterial regulatory protein, Fis family CHR53_24860 PF00989 PAS fold CHR53_24880 PF01546 Peptidase family M20/M25/M40 CHR53_24880 PF07687 Peptidase dimerisation domain CHR53_24885 PF08803 Putative mono-oxygenase ydhR CHR53_24890 PF00196 Bacterial regulatory proteins, luxR family CHR53_24890 PF13185 GAF domain CHR53_24895 PF07859 alpha/beta hydrolase fold CHR53_24920 PF03551 Transcriptional regulator PadR-like family CHR53_24920 PF10400 Virulence activator alpha C-term CHR53_24925 PF13386 Cytochrome C biogenesis protein transmembrane region CHR53_24930 PF01774 UreD urease accessory protein CHR53_24935 PF02492 CobW/HypB/UreG, nucleotide-binding domain CHR53_24940 PF01730 UreF CHR53_24945 PF02814 UreE urease accessory protein, N-terminal domain CHR53_24945 PF05194 UreE urease accessory protein, C-terminal domain CHR53_24950 PF01979 Amidohydrolase family CHR53_24950 PF00449 Urease alpha-subunit, N-terminal domain CHR53_24955 PF00699 Urease beta subunit CHR53_24960 PF00547 Urease, gamma subunit CHR53_24965 PF03253 Urea transporter CHR53_24970 PF09529 Integral membrane protein (intg_mem_TP0381) CHR53_24975 PF00583 Acetyltransferase (GNAT) family CHR53_24975 PF00795 Carbon-nitrogen hydrolase CHR53_24985 PF01557 Fumarylacetoacetate (FAA) hydrolase family CHR53_24990 PF00083 Sugar (and other) transporter CHR53_25005 PF07690 Major Facilitator Superfamily CHR53_25010 PF03466 LysR substrate binding domain CHR53_25010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_25015 PF00491 Arginase family CHR53_25020 PF03616 Sodium/glutamate symporter CHR53_25025 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ CHR53_25030 PF07969 Amidohydrolase family CHR53_25035 PF00795 Carbon-nitrogen hydrolase CHR53_25040 PF10137 Predicted nucleotide-binding protein containing TIR-like domain CHR53_25050 PF00753 Metallo-beta-lactamase superfamily CHR53_25055 PF00375 Sodium:dicarboxylate symporter family CHR53_25060 PF08664 YcbB domain CHR53_25060 PF00072 Response regulator receiver domain CHR53_25065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_25080 PF00512 His Kinase A (phospho-acceptor) domain CHR53_25080 PF00989 PAS fold CHR53_25080 PF13188 PAS domain CHR53_25080 PF13426 PAS domain CHR53_25080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_25090 PF04228 Putative neutral zinc metallopeptidase CHR53_25095 PF08239 Bacterial SH3 domain CHR53_25095 PF00246 Zinc carboxypeptidase CHR53_25100 PF01773 Na+ dependent nucleoside transporter N-terminus CHR53_25100 PF07662 Na+ dependent nucleoside transporter C-terminus CHR53_25105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CHR53_25110 PF01791 DeoC/LacD family aldolase CHR53_25115 PF00591 Glycosyl transferase family, a/b domain CHR53_25115 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CHR53_25115 PF02885 Glycosyl transferase family, helical bundle domain CHR53_25125 PF01048 Phosphorylase superfamily CHR53_25130 PF07690 Major Facilitator Superfamily CHR53_25140 PF07687 Peptidase dimerisation domain CHR53_25140 PF01546 Peptidase family M20/M25/M40 CHR53_25155 PF04199 Putative cyclase CHR53_25160 PF03301 Tryptophan 2,3-dioxygenase CHR53_25165 PF00324 Amino acid permease CHR53_25170 PF00266 Aminotransferase class-V CHR53_25175 PF00440 Bacterial regulatory proteins, tetR family CHR53_25180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CHR53_25180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CHR53_25185 PF00375 Sodium:dicarboxylate symporter family CHR53_25190 PF02386 Cation transport protein CHR53_25195 PF07687 Peptidase dimerisation domain CHR53_25195 PF01546 Peptidase family M20/M25/M40 CHR53_25210 PF03009 Glycerophosphoryl diester phosphodiesterase family CHR53_25220 PF00682 HMGL-like CHR53_25220 PF07836 DmpG-like communication domain CHR53_25245 PF03458 UPF0126 domain CHR53_25250 PF01556 DnaJ C terminal domain CHR53_25250 PF00684 DnaJ central domain CHR53_25250 PF00226 DnaJ domain CHR53_25265 PF04307 LexA-binding, inner membrane-associated putative hydrolase CHR53_25270 PF03831 PhnA domain CHR53_25270 PF08274 PhnA Zinc-Ribbon CHR53_25285 PF10417 C-terminal domain of 1-Cys peroxiredoxin CHR53_25285 PF00578 AhpC/TSA family CHR53_25290 PF10417 C-terminal domain of 1-Cys peroxiredoxin CHR53_25290 PF00578 AhpC/TSA family CHR53_25295 PF00248 Aldo/keto reductase family CHR53_25300 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_25300 PF00041 Fibronectin type III domain CHR53_25300 PF00754 F5/8 type C domain CHR53_25300 PF07555 beta-N-acetylglucosaminidase CHR53_25300 PF00963 Cohesin domain CHR53_25305 PF01594 AI-2E family transporter CHR53_25310 PF00440 Bacterial regulatory proteins, tetR family CHR53_25325 PF07690 Major Facilitator Superfamily CHR53_25350 PF05163 DinB family CHR53_25375 PF00005 ABC transporter CHR53_25375 PF00664 ABC transporter transmembrane region CHR53_25380 PF00005 ABC transporter CHR53_25380 PF00664 ABC transporter transmembrane region CHR53_25385 PF00480 ROK family CHR53_25390 PF00480 ROK family CHR53_25395 PF00232 Glycosyl hydrolase family 1 CHR53_25400 PF00072 Response regulator receiver domain CHR53_25400 PF12833 Helix-turn-helix domain CHR53_25405 PF00672 HAMP domain CHR53_25405 PF02743 Cache domain CHR53_25405 PF06580 Histidine kinase CHR53_25405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_25415 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25420 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CHR53_25430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CHR53_25445 PF04854 Protein of unknown function, DUF624 CHR53_25455 PF17677 Glycosyl hydrolases family 38 C-terminal beta sandwich domain CHR53_25455 PF09261 Alpha mannosidase middle domain CHR53_25455 PF18438 Glycosyl hydrolases family 38 C-terminal domain 1 CHR53_25455 PF01074 Glycosyl hydrolases family 38 N-terminal domain CHR53_25455 PF07748 Glycosyl hydrolases family 38 C-terminal domain CHR53_25470 PF00041 Fibronectin type III domain CHR53_25470 PF00963 Cohesin domain CHR53_25470 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_25470 PF07555 beta-N-acetylglucosaminidase CHR53_25470 PF00754 F5/8 type C domain CHR53_25475 PF00754 F5/8 type C domain CHR53_25475 PF00041 Fibronectin type III domain CHR53_25475 PF00963 Cohesin domain CHR53_25475 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_25475 PF07555 beta-N-acetylglucosaminidase CHR53_25480 PF00963 Cohesin domain CHR53_25480 PF00041 Fibronectin type III domain CHR53_25480 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_25480 PF07555 beta-N-acetylglucosaminidase CHR53_25480 PF00754 F5/8 type C domain CHR53_25485 PF01238 Phosphomannose isomerase type I CHR53_25495 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25500 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25510 PF00072 Response regulator receiver domain CHR53_25510 PF00196 Bacterial regulatory proteins, luxR family CHR53_25515 PF02743 Cache domain CHR53_25515 PF00672 HAMP domain CHR53_25515 PF06580 Histidine kinase CHR53_25515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_25525 PF02837 Glycosyl hydrolases family 2, sugar binding domain CHR53_25525 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 CHR53_25525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CHR53_25525 PF16355 Domain of unknown function (DUF4982) CHR53_25525 PF00703 Glycosyl hydrolases family 2 CHR53_25530 PF01471 Putative peptidoglycan binding domain CHR53_25530 PF07486 Cell Wall Hydrolase CHR53_25535 PF01145 SPFH domain / Band 7 family CHR53_25540 PF00474 Sodium:solute symporter family CHR53_25545 PF11755 Protein of unknown function (DUF3311) CHR53_25550 PF01979 Amidohydrolase family CHR53_25560 PF01546 Peptidase family M20/M25/M40 CHR53_25560 PF07687 Peptidase dimerisation domain CHR53_25565 PF09339 IclR helix-turn-helix domain CHR53_25565 PF01614 Bacterial transcriptional regulator CHR53_25575 PF01791 DeoC/LacD family aldolase CHR53_25580 PF13407 Periplasmic binding protein domain CHR53_25585 PF02653 Branched-chain amino acid transport system / permease component CHR53_25590 PF02653 Branched-chain amino acid transport system / permease component CHR53_25595 PF00005 ABC transporter CHR53_25600 PF04198 Putative sugar-binding domain CHR53_25605 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CHR53_25605 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CHR53_25615 PF13091 PLD-like domain CHR53_25615 PF13396 Phospholipase_D-nuclease N-terminal CHR53_25635 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component CHR53_25640 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component CHR53_25645 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_25650 PF03480 Bacterial extracellular solute-binding protein, family 7 CHR53_25655 PF00072 Response regulator receiver domain CHR53_25660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_25660 PF00989 PAS fold CHR53_25660 PF17203 Single cache domain 3 CHR53_25660 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CHR53_25670 PF12833 Helix-turn-helix domain CHR53_25675 PF17392 Urocanase C-terminal domain CHR53_25675 PF17391 Urocanase N-terminal domain CHR53_25675 PF01175 Urocanase Rossmann-like domain CHR53_25680 PF00766 Electron transfer flavoprotein FAD-binding domain CHR53_25680 PF01012 Electron transfer flavoprotein domain CHR53_25685 PF01012 Electron transfer flavoprotein domain CHR53_25690 PF01175 Urocanase Rossmann-like domain CHR53_25690 PF17392 Urocanase C-terminal domain CHR53_25690 PF17391 Urocanase N-terminal domain CHR53_25695 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_25695 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_25695 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_25700 PF02515 CoA-transferase family III CHR53_25705 PF00474 Sodium:solute symporter family CHR53_25710 PF09856 Predicted transcriptional regulator (DUF2083) CHR53_25710 PF06114 IrrE N-terminal-like domain CHR53_25710 PF01381 Helix-turn-helix CHR53_25715 PF00701 Dihydrodipicolinate synthetase family CHR53_25720 PF00171 Aldehyde dehydrogenase family CHR53_25725 PF00083 Sugar (and other) transporter CHR53_25735 PF01048 Phosphorylase superfamily CHR53_25740 PF07690 Major Facilitator Superfamily CHR53_25745 PF01676 Metalloenzyme superfamily CHR53_25750 PF07702 UTRA domain CHR53_25750 PF00392 Bacterial regulatory proteins, gntR family CHR53_25775 PF07690 Major Facilitator Superfamily CHR53_25780 PF00581 Rhodanese-like domain CHR53_25785 PF01380 SIS domain CHR53_25785 PF01418 Helix-turn-helix domain, rpiR family CHR53_25790 PF07687 Peptidase dimerisation domain CHR53_25790 PF01546 Peptidase family M20/M25/M40 CHR53_25800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_25800 PF13378 Enolase C-terminal domain-like CHR53_25825 PF04960 Glutaminase CHR53_25830 PF01546 Peptidase family M20/M25/M40 CHR53_25835 PF07690 Major Facilitator Superfamily CHR53_25850 PF07702 UTRA domain CHR53_25850 PF00392 Bacterial regulatory proteins, gntR family CHR53_25855 PF00106 short chain dehydrogenase CHR53_25870 PF00581 Rhodanese-like domain CHR53_25880 PF01614 Bacterial transcriptional regulator CHR53_25880 PF09339 IclR helix-turn-helix domain CHR53_25885 PF07687 Peptidase dimerisation domain CHR53_25885 PF01546 Peptidase family M20/M25/M40 CHR53_25895 PF00005 ABC transporter CHR53_25895 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_25900 PF00005 ABC transporter CHR53_25900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_25910 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_25920 PF03746 LamB/YcsF family CHR53_25925 PF02626 Carboxyltransferase domain, subdomain A and B CHR53_25930 PF02682 Carboxyltransferase domain, subdomain C and D CHR53_25935 PF07729 FCD domain CHR53_25935 PF00392 Bacterial regulatory proteins, gntR family CHR53_25945 PF00795 Carbon-nitrogen hydrolase CHR53_25950 PF00083 Sugar (and other) transporter CHR53_25950 PF07690 Major Facilitator Superfamily CHR53_25955 PF13378 Enolase C-terminal domain-like CHR53_25955 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_25960 PF07687 Peptidase dimerisation domain CHR53_25960 PF01546 Peptidase family M20/M25/M40 CHR53_25965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CHR53_25965 PF13378 Enolase C-terminal domain-like CHR53_25970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_25970 PF00005 ABC transporter CHR53_25975 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_25975 PF00005 ABC transporter CHR53_25980 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_25980 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25985 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_25990 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_26005 PF07687 Peptidase dimerisation domain CHR53_26005 PF01546 Peptidase family M20/M25/M40 CHR53_26060 PF03932 CutC family CHR53_26065 PF00480 ROK family CHR53_26075 PF02789 Cytosol aminopeptidase family, N-terminal domain CHR53_26075 PF00883 Cytosol aminopeptidase family, catalytic domain CHR53_26085 PF00005 ABC transporter CHR53_26085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CHR53_26090 PF12911 N-terminal TM domain of oligopeptide transport permease C CHR53_26090 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_26095 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_26100 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_26115 PF07687 Peptidase dimerisation domain CHR53_26115 PF01546 Peptidase family M20/M25/M40 CHR53_26120 PF03606 C4-dicarboxylate anaerobic carrier CHR53_26125 PF07687 Peptidase dimerisation domain CHR53_26125 PF01546 Peptidase family M20/M25/M40 CHR53_26130 PF00171 Aldehyde dehydrogenase family CHR53_26135 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CHR53_26135 PF00205 Thiamine pyrophosphate enzyme, central domain CHR53_26135 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CHR53_26150 PF01546 Peptidase family M20/M25/M40 CHR53_26150 PF07687 Peptidase dimerisation domain CHR53_26155 PF00474 Sodium:solute symporter family CHR53_26160 PF11755 Protein of unknown function (DUF3311) CHR53_26165 PF00155 Aminotransferase class I and II CHR53_26170 PF00158 Sigma-54 interaction domain CHR53_26215 PF00155 Aminotransferase class I and II CHR53_26220 PF01613 Flavin reductase like domain CHR53_26230 PF01687 Riboflavin kinase CHR53_26235 PF01687 Riboflavin kinase CHR53_26250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_26250 PF03466 LysR substrate binding domain CHR53_26255 PF01235 Sodium:alanine symporter family CHR53_26265 PF02595 Glycerate kinase family CHR53_26270 PF00171 Aldehyde dehydrogenase family CHR53_26275 PF01144 Coenzyme A transferase CHR53_26280 PF00465 Iron-containing alcohol dehydrogenase CHR53_26285 PF01144 Coenzyme A transferase CHR53_26295 PF00005 ABC transporter CHR53_26300 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_26300 PF00005 ABC transporter CHR53_26310 PF02653 Branched-chain amino acid transport system / permease component CHR53_26315 PF13458 Periplasmic binding protein CHR53_26320 PF01144 Coenzyme A transferase CHR53_26330 PF00108 Thiolase, N-terminal domain CHR53_26330 PF02803 Thiolase, C-terminal domain CHR53_26335 PF00356 Bacterial regulatory proteins, lacI family CHR53_26340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHR53_26340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHR53_26365 PF00881 Nitroreductase family CHR53_26370 PF01638 HxlR-like helix-turn-helix CHR53_26375 PF12793 Sugar transport-related sRNA regulator N-term CHR53_26375 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CHR53_26380 PF09501 Probable sporulation protein (Bac_small_yrzI) CHR53_26385 PF00487 Fatty acid desaturase CHR53_26390 PF00196 Bacterial regulatory proteins, luxR family CHR53_26390 PF00072 Response regulator receiver domain CHR53_26400 PF07969 Amidohydrolase family CHR53_26405 PF07687 Peptidase dimerisation domain CHR53_26405 PF01546 Peptidase family M20/M25/M40 CHR53_26410 PF00291 Pyridoxal-phosphate dependent enzyme CHR53_26430 PF03023 Lipid II flippase MurJ CHR53_26445 PF13439 Glycosyltransferase Family 4 CHR53_26445 PF00534 Glycosyl transferases group 1 CHR53_26450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CHR53_26450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CHR53_26450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CHR53_26460 PF00535 Glycosyl transferase family 2 CHR53_26465 PF02350 UDP-N-acetylglucosamine 2-epimerase CHR53_26470 PF01370 NAD dependent epimerase/dehydratase family CHR53_26475 PF08485 Polysaccharide biosynthesis protein C-terminal CHR53_26475 PF02719 Polysaccharide biosynthesis protein CHR53_26490 PF02397 Bacterial sugar transferase CHR53_26495 PF02719 Polysaccharide biosynthesis protein CHR53_26505 PF13614 AAA domain CHR53_26510 PF02706 Chain length determinant protein CHR53_26510 PF13807 G-rich domain on putative tyrosine kinase CHR53_26520 PF00924 Mechanosensitive ion channel CHR53_26535 PF00905 Penicillin binding protein transpeptidase domain CHR53_26535 PF00912 Transglycosylase CHR53_26580 PF00092 von Willebrand factor type A domain CHR53_26595 PF01872 RibD C-terminal domain CHR53_26600 PF07687 Peptidase dimerisation domain CHR53_26600 PF01546 Peptidase family M20/M25/M40 CHR53_26605 PF07690 Major Facilitator Superfamily CHR53_26620 PF02898 Nitric oxide synthase, oxygenase domain CHR53_26635 PF00877 NlpC/P60 family CHR53_26635 PF01476 LysM domain CHR53_26640 PF00294 pfkB family carbohydrate kinase CHR53_26650 PF02447 GntP family permease CHR53_26655 PF02595 Glycerate kinase family CHR53_26660 PF13556 PucR C-terminal helix-turn-helix domain CHR53_26660 PF05651 Putative sugar diacid recognition CHR53_26660 PF17853 GGDEF-like domain CHR53_26680 PF00271 Helicase conserved C-terminal domain CHR53_26680 PF12419 SNF2 Helicase protein CHR53_26680 PF00176 SNF2 family N-terminal domain CHR53_26685 PF03990 G5-linked-Ubiquitin-like domain CHR53_26685 PF06725 3D domain CHR53_26685 PF07501 G5 domain CHR53_26710 PF14183 YwpF-like protein CHR53_26725 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CHR53_26730 PF03717 Penicillin-binding Protein dimerisation domain CHR53_26730 PF05223 NTF2-like N-terminal transpeptidase domain CHR53_26730 PF00905 Penicillin binding protein transpeptidase domain CHR53_26735 PF01551 Peptidase family M23 CHR53_26745 PF08486 Stage II sporulation protein CHR53_26750 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHR53_26760 PF06612 Protein of unknown function (DUF1146) CHR53_26770 PF11181 Heat induced stress protein YflT CHR53_26780 PF04226 Transglycosylase associated protein CHR53_26790 PF01739 CheR methyltransferase, SAM binding domain CHR53_26790 PF03705 CheR methyltransferase, all-alpha domain CHR53_26795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_26795 PF00512 His Kinase A (phospho-acceptor) domain CHR53_26795 PF09308 LuxQ, periplasmic CHR53_26795 PF00072 Response regulator receiver domain CHR53_26800 PF00210 Ferritin-like domain CHR53_26815 PF13426 PAS domain CHR53_26815 PF07228 Stage II sporulation protein E (SpoIIE) CHR53_26820 PF04545 Sigma-70, region 4 CHR53_26820 PF04539 Sigma-70 region 3 CHR53_26820 PF04542 Sigma-70 region 2 CHR53_26825 PF13581 Histidine kinase-like ATPase domain CHR53_26830 PF01740 STAS domain CHR53_26835 PF07690 Major Facilitator Superfamily CHR53_26840 PF01047 MarR family CHR53_26845 PF17676 LD-carboxypeptidase C-terminal domain CHR53_26845 PF02016 LD-carboxypeptidase N-terminal domain CHR53_26870 PF13302 Acetyltransferase (GNAT) domain CHR53_26875 PF02673 Bacitracin resistance protein BacA CHR53_26890 PF00155 Aminotransferase class I and II CHR53_26890 PF00392 Bacterial regulatory proteins, gntR family CHR53_26910 PF01544 CorA-like Mg2+ transporter protein CHR53_26935 PF07690 Major Facilitator Superfamily CHR53_26945 PF01595 Cyclin M transmembrane N-terminal domain CHR53_26945 PF03471 Transporter associated domain CHR53_26945 PF00571 CBS domain CHR53_26950 PF05552 Conserved TM helix CHR53_26965 PF00361 Proton-conducting membrane transporter CHR53_26970 PF01059 NADH-ubiquinone oxidoreductase chain 4, amino terminus CHR53_26970 PF00361 Proton-conducting membrane transporter CHR53_26975 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus CHR53_26975 PF00361 Proton-conducting membrane transporter CHR53_26975 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CHR53_26980 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CHR53_26985 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 CHR53_26995 PF00146 NADH dehydrogenase CHR53_27000 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit CHR53_27005 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit CHR53_27010 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit CHR53_27015 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 CHR53_27020 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CHR53_27020 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CHR53_27025 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHR53_27025 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHR53_27030 PF00231 ATP synthase CHR53_27035 PF00306 ATP synthase alpha/beta chain, C terminal domain CHR53_27035 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHR53_27035 PF02874 ATP synthase alpha/beta family, beta-barrel domain CHR53_27040 PF00213 ATP synthase delta (OSCP) subunit CHR53_27045 PF00430 ATP synthase B/B' CF(0) CHR53_27050 PF00137 ATP synthase subunit C CHR53_27055 PF00119 ATP synthase A chain CHR53_27060 PF03899 ATP synthase I chain CHR53_27070 PF05922 Peptidase inhibitor I9 CHR53_27070 PF00082 Subtilase family CHR53_27070 PF13860 FlgD Ig-like domain CHR53_27070 PF02225 PA domain CHR53_27085 PF00464 Serine hydroxymethyltransferase CHR53_27090 PF04260 Protein of unknown function (DUF436) CHR53_27095 PF02502 Ribose/Galactose Isomerase CHR53_27100 PF01451 Low molecular weight phosphotyrosine protein phosphatase CHR53_27105 PF02659 Putative manganese efflux pump CHR53_27110 PF03481 Putative GTP-binding controlling metal-binding CHR53_27110 PF01300 Telomere recombination CHR53_27125 PF09551 Stage II sporulation protein R (spore_II_R) CHR53_27130 PF13847 Methyltransferase domain CHR53_27130 PF17827 PrmC N-terminal domain CHR53_27135 PF03462 PCRF domain CHR53_27135 PF00472 RF-1 domain CHR53_27145 PF00265 Thymidine kinase CHR53_27150 PF01197 Ribosomal protein L31 CHR53_27155 PF07498 Rho termination factor, N-terminal domain CHR53_27155 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CHR53_27155 PF07497 Rho termination factor, RNA-binding domain CHR53_27160 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CHR53_27165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CHR53_27170 PF00923 Transaldolase/Fructose-6-phosphate aldolase CHR53_27175 PF01116 Fructose-bisphosphate aldolase class-II CHR53_27180 PF00072 Response regulator receiver domain CHR53_27185 PF10740 Domain of unknown function (DUF2529) CHR53_27190 PF06418 CTP synthase N-terminus CHR53_27190 PF00117 Glutamine amidotransferase class-I CHR53_27195 PF05066 HB1, ASXL, restriction endonuclease HTH domain CHR53_27200 PF02310 B12 binding domain CHR53_27200 PF01642 Methylmalonyl-CoA mutase CHR53_27210 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_27210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_27210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_27215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CHR53_27215 PF02770 Acyl-CoA dehydrogenase, middle domain CHR53_27215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CHR53_27220 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CHR53_27220 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CHR53_27225 PF00108 Thiolase, N-terminal domain CHR53_27225 PF02803 Thiolase, C-terminal domain CHR53_27230 PF02754 Cysteine-rich domain CHR53_27230 PF13183 4Fe-4S dicluster domain CHR53_27235 PF13091 PLD-like domain CHR53_27245 PF08141 Small acid-soluble spore protein H family CHR53_27250 PF09148 Domain of unknown function (DUF1934) CHR53_27255 PF00491 Arginase family CHR53_27260 PF17284 Spermidine synthase tetramerisation domain CHR53_27265 PF00905 Penicillin binding protein transpeptidase domain CHR53_27265 PF00912 Transglycosylase CHR53_27270 PF08741 YwhD family CHR53_27275 PF02163 Peptidase family M50 CHR53_27280 PF01361 Tautomerase enzyme CHR53_27295 PF01966 HD domain CHR53_27300 PF07293 Protein of unknown function (DUF1450) CHR53_27310 PF03099 Biotin/lipoate A/B protein ligase family CHR53_27315 PF01515 Phosphate acetyl/butaryl transferase CHR53_27325 PF09671 Spore coat protein (Spore_GerQ) CHR53_27330 PF04241 Protein of unknown function (DUF423) CHR53_27340 PF00899 ThiF family CHR53_27350 PF02391 MoaE protein CHR53_27355 PF00994 Probable molybdopterin binding domain CHR53_27355 PF03454 MoeA C-terminal region (domain IV) CHR53_27355 PF03453 MoeA N-terminal region (domain I and II) CHR53_27360 PF03453 MoeA N-terminal region (domain I and II) CHR53_27360 PF03454 MoeA C-terminal region (domain IV) CHR53_27360 PF00994 Probable molybdopterin binding domain CHR53_27365 PF12804 MobA-like NTP transferase domain CHR53_27380 PF09163 Formate dehydrogenase N, transmembrane CHR53_27380 PF12800 4Fe-4S binding domain CHR53_27380 PF13247 4Fe-4S dicluster domain CHR53_27390 PF02634 FdhD/NarQ family CHR53_27395 PF08543 Phosphomethylpyrimidine kinase CHR53_27400 PF05504 Spore germination B3/ GerAC like, C-terminal CHR53_27405 PF03845 Spore germination protein CHR53_27410 PF03323 Bacillus/Clostridium GerA spore germination protein CHR53_27415 PF08830 Protein of unknown function (DUF1806) CHR53_27420 PF02585 GlcNAc-PI de-N-acetylase CHR53_27435 PF18793 Nitrous oxide reductase propeller repeat 2 CHR53_27435 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CHR53_27435 PF18764 Nitrous oxide reductase propeller repeat CHR53_27455 PF00005 ABC transporter CHR53_27465 PF07995 Glucose / Sorbosone dehydrogenase CHR53_27485 PF04073 Aminoacyl-tRNA editing domain CHR53_27495 PF00005 ABC transporter CHR53_27500 PF00005 ABC transporter CHR53_27500 PF12399 Branched-chain amino acid ATP-binding cassette transporter CHR53_27505 PF11862 Domain of unknown function (DUF3382) CHR53_27505 PF02653 Branched-chain amino acid transport system / permease component CHR53_27510 PF02653 Branched-chain amino acid transport system / permease component CHR53_27520 PF07690 Major Facilitator Superfamily CHR53_27525 PF00005 ABC transporter CHR53_27525 PF00664 ABC transporter transmembrane region CHR53_27530 PF00664 ABC transporter transmembrane region CHR53_27530 PF00005 ABC transporter CHR53_27555 PF02374 Anion-transporting ATPase CHR53_27560 PF00732 GMC oxidoreductase CHR53_27560 PF05199 GMC oxidoreductase CHR53_27565 PF13618 Gluconate 2-dehydrogenase subunit 3 CHR53_27575 PF00082 Subtilase family CHR53_27575 PF06280 Fn3-like domain CHR53_27575 PF02225 PA domain CHR53_27575 PF00746 LPXTG cell wall anchor motif CHR53_27590 PF00005 ABC transporter CHR53_27590 PF13732 Domain of unknown function (DUF4162) CHR53_27605 PF07687 Peptidase dimerisation domain CHR53_27605 PF01546 Peptidase family M20/M25/M40 CHR53_27615 PF01645 Conserved region in glutamate synthase CHR53_27620 PF03466 LysR substrate binding domain CHR53_27620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CHR53_27625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CHR53_27625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CHR53_27650 PF03734 L,D-transpeptidase catalytic domain CHR53_27655 PF03734 L,D-transpeptidase catalytic domain CHR53_27660 PF07969 Amidohydrolase family CHR53_27665 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CHR53_27670 PF01842 ACT domain CHR53_27670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CHR53_27670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CHR53_27685 PF01476 LysM domain CHR53_27685 PF06725 3D domain CHR53_27690 PF02667 Short chain fatty acid transporter CHR53_27695 PF00293 NUDIX domain CHR53_27705 PF13421 SPFH domain-Band 7 family CHR53_27710 PF04536 TPM domain CHR53_27715 PF08271 TFIIB zinc-binding CHR53_27720 PF04012 PspA/IM30 family CHR53_27725 PF03435 Saccharopine dehydrogenase NADP binding domain CHR53_27725 PF16653 Saccharopine dehydrogenase C-terminal domain CHR53_27730 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CHR53_27745 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CHR53_27745 PF13360 PQQ-like domain CHR53_27750 PF07995 Glucose / Sorbosone dehydrogenase CHR53_27755 PF02445 Quinolinate synthetase A protein CHR53_27760 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CHR53_27760 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CHR53_27765 PF00890 FAD binding domain CHR53_27765 PF02910 Fumarate reductase flavoprotein C-term CHR53_27775 PF12832 MFS_1 like family CHR53_27790 PF06039 Malate:quinone oxidoreductase (Mqo) CHR53_27810 PF02607 B12 binding domain CHR53_27810 PF13411 MerR HTH family regulatory protein CHR53_27815 PF02687 FtsX-like permease family CHR53_27820 PF00005 ABC transporter CHR53_27830 PF01266 FAD dependent oxidoreductase CHR53_27835 PF00754 F5/8 type C domain CHR53_27835 PF02838 Glycosyl hydrolase family 20, domain 2 CHR53_27835 PF00404 Dockerin type I domain CHR53_27835 PF07555 beta-N-acetylglucosaminidase CHR53_27865 PF04143 Sulphur transport CHR53_27920 PF00881 Nitroreductase family CHR53_27925 PF01479 S4 domain CHR53_27925 PF00849 RNA pseudouridylate synthase CHR53_27930 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CHR53_27930 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CHR53_27940 PF12833 Helix-turn-helix domain CHR53_27940 PF02805 Metal binding domain of Ada CHR53_27950 PF02590 Predicted SPOUT methyltransferase CHR53_27960 PF13180 PDZ domain CHR53_27965 PF00753 Metallo-beta-lactamase superfamily CHR53_27970 PF09648 YycH protein CHR53_27975 PF07435 YycH protein CHR53_27980 PF00512 His Kinase A (phospho-acceptor) domain CHR53_27980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CHR53_27980 PF13426 PAS domain CHR53_27980 PF00672 HAMP domain CHR53_27985 PF00072 Response regulator receiver domain CHR53_27985 PF00486 Transcriptional regulatory protein, C terminal CHR53_27990 PF01464 Transglycosylase SLT domain CHR53_27990 PF10145 Phage-related minor tail protein CHR53_27990 PF01551 Peptidase family M23 CHR53_28015 PF00709 Adenylosuccinate synthetase CHR53_28020 PF00772 DnaB-like helicase N terminal domain CHR53_28020 PF03796 DnaB-like helicase C terminal domain CHR53_28025 PF01281 Ribosomal protein L9, N-terminal domain CHR53_28025 PF03948 Ribosomal protein L9, C-terminal domain CHR53_28030 PF02272 DHHA1 domain CHR53_28030 PF01368 DHH family CHR53_28035 PF09991 Predicted membrane protein (DUF2232) CHR53_28040 PF12727 PBP superfamily domain CHR53_28040 PF12728 Helix-turn-helix domain CHR53_28050 PF00528 Binding-protein-dependent transport system inner membrane component CHR53_28055 PF01084 Ribosomal protein S18 CHR53_28060 PF00436 Single-strand binding protein family CHR53_28065 PF01250 Ribosomal protein S6 CHR53_28070 PF06071 Protein of unknown function (DUF933) CHR53_28070 PF01926 50S ribosome-binding GTPase CHR53_28075 PF05036 Sporulation related domain CHR53_28075 PF08239 Bacterial SH3 domain CHR53_28075 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CHR53_28080 PF01568 Molydopterin dinucleotide binding domain CHR53_28080 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CHR53_28080 PF00384 Molybdopterin oxidoreductase CHR53_28085 PF06107 Bacterial protein of unknown function (DUF951) CHR53_28090 PF00924 Mechanosensitive ion channel CHR53_28095 PF06866 Protein of unknown function (DUF1256) CHR53_28105 PF17762 HTH domain found in ParB protein CHR53_28105 PF02195 ParB-like nuclease domain CHR53_28110 PF13614 AAA domain CHR53_28115 PF02195 ParB-like nuclease domain CHR53_28115 PF17762 HTH domain found in ParB protein CHR53_28120 PF02527 rRNA small subunit methyltransferase G CHR53_28125 PF13932 GidA associated domain CHR53_28125 PF01134 Glucose inhibited division protein A CHR53_28130 PF12631 MnmE helical domain CHR53_28130 PF10396 GTP-binding protein TrmE N-terminus CHR53_28130 PF01926 50S ribosome-binding GTPase CHR53_28135 PF14804 Jag N-terminus CHR53_28135 PF01424 R3H domain CHR53_28140 PF02096 60Kd inner membrane protein CHR53_28145 PF00825 Ribonuclease P CHR53_28150 PF00468 Ribosomal protein L34