locus-tag class description ABE28_000015 IPR026988 YaaC-like protein ABE28_000020 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ABE28_000020 IPR001093 IMP dehydrogenase/GMP reductase ABE28_000020 IPR005990 Inosine-5'-monophosphate dehydrogenase ABE28_000020 IPR000644 CBS domain ABE28_000020 IPR013785 Aldolase-type TIM barrel ABE28_000025 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ABE28_000025 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily ABE28_000025 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ABE28_000025 IPR015956 Penicillin-binding protein, C-terminal domain superfamily ABE28_000025 IPR012338 Beta-lactamase/transpeptidase-like ABE28_000025 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal ABE28_000030 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_000030 IPR033729 Serine-tRNA ligase catalytic core domain ABE28_000030 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ABE28_000030 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ABE28_000030 IPR002317 Serine-tRNA ligase, type1 ABE28_000030 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily ABE28_000030 IPR015866 Serine-tRNA synthetase, type1, N-terminal ABE28_000040 IPR002624 Deoxynucleoside kinase ABE28_000040 IPR031314 Deoxynucleoside kinase domain ABE28_000040 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000045 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000045 IPR031314 Deoxynucleoside kinase domain ABE28_000045 IPR002624 Deoxynucleoside kinase ABE28_000050 IPR000868 Isochorismatase-like ABE28_000050 IPR036380 Isochorismatase-like superfamily ABE28_000055 IPR028883 tRNA-specific adenosine deaminase ABE28_000055 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_000055 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_000055 IPR016193 Cytidine deaminase-like ABE28_000065 IPR001270 ClpA/B family ABE28_000065 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000065 IPR012763 DNA polymerase III, subunit gamma/ tau ABE28_000065 IPR022754 DNA polymerase III, gamma subunit, domain III ABE28_000065 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ABE28_000065 IPR003593 AAA+ ATPase domain ABE28_000070 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABE28_000070 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABE28_000075 IPR023628 Recombination protein RecR, C4-type zinc finger ABE28_000075 IPR015967 Recombination protein RecR, conserved site ABE28_000075 IPR023627 Recombination protein RecR ABE28_000075 IPR000093 DNA recombination protein RecR ABE28_000075 IPR006171 TOPRIM domain ABE28_000075 IPR034137 RecR, TOPRIM domain ABE28_000080 IPR019644 Protein of unknown function DUF2508 ABE28_000085 IPR010001 SigmaK-factor processing regulatory BofA ABE28_000105 IPR019700 Anti-sigma-G factor Gin ABE28_000110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_000110 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily ABE28_000110 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal ABE28_000110 IPR000310 Orn/Lys/Arg decarboxylase, major domain ABE28_000110 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_000115 IPR018094 Thymidylate kinase ABE28_000115 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000115 IPR039430 Thymidylate kinase-like domain ABE28_000115 IPR018095 Thymidylate kinase, conserved site ABE28_000120 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_000120 IPR010375 Cyclic-di-AMP receptor ABE28_000120 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABE28_000125 IPR024042 TM1646-like domain superfamily ABE28_000125 IPR005585 Protein of unknown function DUF327 ABE28_000130 IPR004622 DNA polymerase III, delta prime subunit ABE28_000130 IPR015199 DNA polymerase III, delta subunit, C-terminal ABE28_000130 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000135 IPR007557 PSP1, C-terminal ABE28_000140 IPR010377 Initiation control protein YabA ABE28_000145 IPR007848 Methyltransferase small domain ABE28_000145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000150 IPR035901 GIY-YIG endonuclease superfamily ABE28_000150 IPR000305 GIY-YIG endonuclease ABE28_000155 IPR000878 Tetrapyrrole methylase ABE28_000155 IPR035996 Tetrapyrrole methylase superfamily ABE28_000155 IPR014777 Tetrapyrrole methylase, subdomain 1 ABE28_000155 IPR008189 rRNA small subunit methyltransferase I ABE28_000155 IPR018063 SAM-dependent methyltransferase RsmI, conserved site ABE28_000155 IPR014776 Tetrapyrrole methylase, subdomain 2 ABE28_000160 IPR037914 SpoVT-AbrB domain superfamily ABE28_000160 IPR007159 SpoVT-AbrB domain ABE28_000160 IPR040678 AbrB, C-terminal ABE28_000165 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ABE28_000165 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000165 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain ABE28_000165 IPR002547 tRNA-binding domain ABE28_000165 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_000165 IPR033911 Methioninyl-tRNA synthetase core domain ABE28_000165 IPR012340 Nucleic acid-binding, OB-fold ABE28_000165 IPR014758 Methionyl-tRNA synthetase ABE28_000165 IPR015413 Methionyl/Leucyl tRNA synthetase ABE28_000165 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal ABE28_000165 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_000165 IPR023457 Methionine-tRNA synthetase, type 2 ABE28_000170 IPR018228 Deoxyribonuclease, TatD-related, conserved site ABE28_000170 IPR015991 Uncharacterised hydrolase TatD-type ABE28_000170 IPR032466 Metal-dependent hydrolase ABE28_000170 IPR001130 TatD family ABE28_000175 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ABE28_000175 IPR011098 G5 domain ABE28_000175 IPR010611 3D domain ABE28_000175 IPR036908 RlpA-like domain superfamily ABE28_000180 IPR034141 Ribonuclease M5-like, TOPRIM domain ABE28_000180 IPR006171 TOPRIM domain ABE28_000180 IPR004466 Ribonuclease M5 ABE28_000180 IPR025156 Ribonuclease M5, C-terminal domain ABE28_000185 IPR011530 Ribosomal RNA adenine dimethylase ABE28_000185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000185 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal ABE28_000185 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site ABE28_000185 IPR023165 rRNA adenine dimethylase-like ABE28_000185 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ABE28_000190 IPR008764 Peptidase U57, YabG ABE28_000195 IPR009366 Protein Veg ABE28_000200 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_000200 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_000205 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000205 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ABE28_000205 IPR006204 GHMP kinase N-terminal domain ABE28_000205 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_000205 IPR013750 GHMP kinase, C-terminal domain ABE28_000205 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000210 IPR000836 Phosphoribosyltransferase domain ABE28_000210 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000210 IPR036390 Winged helix DNA-binding domain superfamily ABE28_000210 IPR029057 Phosphoribosyltransferase-like ABE28_000210 IPR015265 Bacterial purine repressor, N-terminal ABE28_000210 IPR010078 Pur operon repressor ABE28_000215 IPR006056 RidA family ABE28_000215 IPR019897 RidA, conserved site ABE28_000215 IPR006175 YjgF/YER057c/UK114 family ABE28_000215 IPR035959 RutC-like superfamily ABE28_000220 IPR036751 Stage V sporulation protein G superfamily ABE28_000220 IPR007170 Stage V sporulation protein G ABE28_000225 IPR005835 Nucleotidyl transferase domain ABE28_000225 IPR011004 Trimeric LpxA-like superfamily ABE28_000225 IPR018357 Hexapeptide transferase, conserved site ABE28_000225 IPR038009 GlmU, C-terminal LbH domain ABE28_000225 IPR001451 Hexapeptide repeat ABE28_000225 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_000225 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase ABE28_000230 IPR000836 Phosphoribosyltransferase domain ABE28_000230 IPR005946 Ribose-phosphate pyrophosphokinase ABE28_000230 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain ABE28_000230 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type ABE28_000230 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site ABE28_000230 IPR029057 Phosphoribosyltransferase-like ABE28_000240 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_000240 IPR015168 SsuA/THI5-like ABE28_000240 IPR010067 Aliphatic sulfonates-binding protein ABE28_000245 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent ABE28_000245 IPR011251 Luciferase-like domain ABE28_000245 IPR036661 Luciferase-like domain superfamily ABE28_000250 IPR035906 MetI-like superfamily ABE28_000250 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_000255 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000255 IPR017871 ABC transporter, conserved site ABE28_000255 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB ABE28_000255 IPR003439 ABC transporter-like ABE28_000255 IPR003593 AAA+ ATPase domain ABE28_000260 IPR001021 Ribosomal protein L25, long-form ABE28_000260 IPR037121 Ribosomal protein L25, C-terminal ABE28_000260 IPR020057 Ribosomal protein L25, beta domain ABE28_000260 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ABE28_000260 IPR029751 Ribosomal protein L25 ABE28_000260 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ABE28_000265 IPR036416 Peptidyl-tRNA hydrolase superfamily ABE28_000265 IPR018171 Peptidyl-tRNA hydrolase, conserved site ABE28_000265 IPR001328 Peptidyl-tRNA hydrolase ABE28_000270 IPR020115 Anti-sigma-F factor Fin ABE28_000275 IPR036101 CarD-like/TRCF domain superfamily ABE28_000275 IPR011545 DEAD/DEAH box helicase domain ABE28_000275 IPR003711 CarD-like/TRCF domain ABE28_000275 IPR001650 Helicase, C-terminal ABE28_000275 IPR037235 TRCF-like, C-terminal domain ABE28_000275 IPR005118 Transcription-repair-coupling factor, C-terminal domain ABE28_000275 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000275 IPR004576 Transcription-repair coupling factor ABE28_000275 IPR041471 UvrB, interaction domain ABE28_000275 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_000280 IPR039472 Sporulation stage V protein T, GAF domain ABE28_000280 IPR029016 GAF-like domain superfamily ABE28_000280 IPR037914 SpoVT-AbrB domain superfamily ABE28_000280 IPR007159 SpoVT-AbrB domain ABE28_000280 IPR014213 Sporulation stage V, protein T ABE28_000285 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_000285 IPR002797 Polysaccharide biosynthesis protein ABE28_000285 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_000290 IPR014777 Tetrapyrrole methylase, subdomain 1 ABE28_000290 IPR035996 Tetrapyrrole methylase superfamily ABE28_000290 IPR011551 NTP pyrophosphohydrolase MazG ABE28_000290 IPR000878 Tetrapyrrole methylase ABE28_000290 IPR035013 YabN, N-terminal ABE28_000290 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted ABE28_000290 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_000295 IPR036986 RNA-binding S4 domain superfamily ABE28_000295 IPR025490 RNA-binding protein, HP1423 type ABE28_000295 IPR002942 RNA-binding S4 domain ABE28_000300 IPR038705 YabP superfamily ABE28_000300 IPR022476 Sporulation protein YabP/YqfC ABE28_000300 IPR012504 Sporulation protein YabP ABE28_000305 IPR019074 Spore cortex biosynthesis protein, YabQ-like ABE28_000305 IPR014242 Spore cortex biosynthesis protein, YabQ ABE28_000310 IPR039076 Cell division protein DivIC ABE28_000310 IPR007060 Septum formation initiator FtsL/DivIC ABE28_000315 IPR003029 S1 domain ABE28_000315 IPR022967 RNA-binding domain, S1 ABE28_000315 IPR012340 Nucleic acid-binding, OB-fold ABE28_000330 IPR036457 PPM-type phosphatase domain superfamily ABE28_000330 IPR014221 Sporulation stage II, protein E ABE28_000330 IPR001932 PPM-type phosphatase domain ABE28_000335 IPR036465 von Willebrand factor A-like domain superfamily ABE28_000335 IPR002035 von Willebrand factor, type A ABE28_000340 IPR011009 Protein kinase-like domain superfamily ABE28_000340 IPR017441 Protein kinase, ATP binding site ABE28_000340 IPR000719 Protein kinase domain ABE28_000345 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain ABE28_000345 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal ABE28_000345 IPR012094 tRNA(Ile)-lysidine synthase ABE28_000345 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal ABE28_000345 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000345 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal ABE28_000360 IPR004619 Type III pantothenate kinase ABE28_000365 IPR016153 Heat shock protein Hsp33, N-terminal ABE28_000365 IPR016154 Heat shock protein Hsp33, C-terminal ABE28_000365 IPR000397 Heat shock protein Hsp33 ABE28_000370 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ABE28_000370 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ABE28_000370 IPR027304 Trigger factor/SurA domain superfamily ABE28_000375 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_000375 IPR005856 Cysteine synthase ABE28_000375 IPR005859 Cysteine synthase CysK ABE28_000375 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ABE28_000375 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_000380 IPR000489 Pterin-binding domain ABE28_000380 IPR006390 Dihydropteroate synthase ABE28_000380 IPR011005 Dihydropteroate synthase-like ABE28_000385 IPR006156 Dihydroneopterin aldolase ABE28_000385 IPR006157 Dihydroneopterin aldolase/epimerase domain ABE28_000390 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK ABE28_000390 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily ABE28_000395 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_000395 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_000400 IPR018517 tRNA-dihydrouridine synthase, conserved site ABE28_000400 IPR013785 Aldolase-type TIM barrel ABE28_000400 IPR035587 DUS-like, FMN-binding domain ABE28_000400 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal ABE28_000400 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 ABE28_000400 IPR001269 tRNA-dihydrouridine synthase ABE28_000405 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_000405 IPR002313 Lysine-tRNA ligase, class II ABE28_000405 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal ABE28_000405 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ABE28_000405 IPR012340 Nucleic acid-binding, OB-fold ABE28_000405 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ABE28_000405 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II ABE28_000425 IPR041908 CtsR, C-terminal domain superfamily ABE28_000425 IPR041902 CtsR, N-terminal domain superfamily ABE28_000425 IPR041473 CtsR, C-terminal dimerization domain ABE28_000425 IPR008463 Transcriptional regulator CtsR ABE28_000425 IPR040465 CtsR, N-terminal HTH domain ABE28_000430 IPR025542 YacH protein ABE28_000430 IPR001943 UVR domain ABE28_000430 IPR036876 UVR domain superfamily ABE28_000435 IPR022414 ATP:guanido phosphotransferase, catalytic domain ABE28_000435 IPR023660 Protein arginine kinase ABE28_000435 IPR000749 ATP:guanido phosphotransferase ABE28_000435 IPR022415 ATP:guanido phosphotransferase active site ABE28_000435 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ABE28_000440 IPR001943 UVR domain ABE28_000440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000440 IPR004176 Clp, N-terminal ABE28_000440 IPR041546 ClpA/ClpB, AAA lid domain ABE28_000440 IPR019489 Clp ATPase, C-terminal ABE28_000440 IPR036628 Clp, N-terminal domain superfamily ABE28_000440 IPR003959 ATPase, AAA-type, core ABE28_000440 IPR003593 AAA+ ATPase domain ABE28_000440 IPR028299 ClpA/B, conserved site 2 ABE28_000440 IPR001270 ClpA/B family ABE28_000440 IPR018368 ClpA/B, conserved site 1 ABE28_000445 IPR003593 AAA+ ATPase domain ABE28_000445 IPR004504 DNA repair protein RadA ABE28_000445 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000445 IPR041166 LapB, rubredoxin metal binding domain ABE28_000445 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ABE28_000445 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000450 IPR018906 DNA integrity scanning, DisA, linker region ABE28_000450 IPR038331 DisA, linker domain superfamily ABE28_000450 IPR010994 RuvA domain 2-like ABE28_000450 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_000450 IPR023763 DNA integrity scanning protein, DisA ABE28_000450 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000455 IPR029060 PIN-like domain superfamily ABE28_000455 IPR002716 PIN domain ABE28_000455 IPR002792 TRAM domain ABE28_000460 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_000460 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABE28_000460 IPR034683 Cytidylyltransferase IspD/TarI ABE28_000460 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site ABE28_000465 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase ABE28_000465 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site ABE28_000465 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily ABE28_000470 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_000470 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial ABE28_000470 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ABE28_000470 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ABE28_000470 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding ABE28_000470 IPR033910 Glutamyl-tRNA synthetase ABE28_000470 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 ABE28_000470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000475 IPR018357 Hexapeptide transferase, conserved site ABE28_000475 IPR001451 Hexapeptide repeat ABE28_000475 IPR005881 Serine O-acetyltransferase ABE28_000475 IPR010493 Serine acetyltransferase, N-terminal ABE28_000475 IPR011004 Trimeric LpxA-like superfamily ABE28_000475 IPR042122 Serine acetyltransferase, N-terminal domain superfamily ABE28_000480 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_000480 IPR032678 tRNA synthetases class I, catalytic domain ABE28_000480 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000480 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase ABE28_000480 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR ABE28_000480 IPR015803 Cysteine-tRNA ligase ABE28_000485 IPR036389 Ribonuclease III, endonuclease domain superfamily ABE28_000485 IPR000999 Ribonuclease III domain ABE28_000485 IPR008226 Mini-ribonuclease 3 family ABE28_000490 IPR001537 tRNA/rRNA methyltransferase, SpoU type ABE28_000490 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ABE28_000490 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_000490 IPR029028 Alpha/beta knot methyltransferases ABE28_000490 IPR029064 50S ribosomal protein L30e-like ABE28_000490 IPR004441 RNA methyltransferase TrmH family ABE28_000495 IPR010298 Protein of unknown function DUF901 ABE28_000500 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_000500 IPR013325 RNA polymerase sigma factor, region 2 ABE28_000500 IPR000943 RNA polymerase sigma-70 ABE28_000500 IPR016371 RNA polymerase sigma-H factor ABE28_000500 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000500 IPR000792 Transcription regulator LuxR, C-terminal ABE28_000500 IPR007627 RNA polymerase sigma-70 region 2 ABE28_000500 IPR014218 RNA polymerase sigma-H type ABE28_000500 IPR014284 RNA polymerase sigma-70 like domain ABE28_000505 IPR038584 Ribosomal protein L33 superfamily ABE28_000505 IPR001705 Ribosomal protein L33 ABE28_000505 IPR018264 Ribosomal protein L33, conserved site ABE28_000505 IPR011332 Zinc-binding ribosomal protein ABE28_000510 IPR005807 SecE subunit of protein translocation complex, bacterial-like ABE28_000510 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit ABE28_000510 IPR038379 SecE superfamily ABE28_000515 IPR036735 NusG, N-terminal domain superfamily ABE28_000515 IPR006645 NusG, N-terminal ABE28_000515 IPR005824 KOW ABE28_000515 IPR014722 Ribosomal protein L2, domain 2 ABE28_000515 IPR001062 Transcription antitermination protein, NusG ABE28_000515 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ABE28_000515 IPR008991 Translation protein SH3-like domain superfamily ABE28_000520 IPR000911 Ribosomal protein L11/L12 ABE28_000520 IPR020783 Ribosomal protein L11, C-terminal ABE28_000520 IPR020784 Ribosomal protein L11, N-terminal ABE28_000520 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABE28_000520 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABE28_000520 IPR006519 Ribosomal protein L11, bacterial-type ABE28_000520 IPR020785 Ribosomal protein L11, conserved site ABE28_000525 IPR002143 Ribosomal protein L1 ABE28_000525 IPR005878 Ribosomal protein L1, bacterial-type ABE28_000525 IPR023673 Ribosomal protein L1, conserved site ABE28_000525 IPR023674 Ribosomal protein L1-like ABE28_000525 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ABE28_000525 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ABE28_000530 IPR022973 Ribosomal protein L10 ABE28_000530 IPR002363 Ribosomal protein L10, eubacterial, conserved site ABE28_000530 IPR001790 Ribosomal protein L10P ABE28_000535 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily ABE28_000535 IPR008932 Ribosomal protein L7/L12, oligomerisation ABE28_000535 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABE28_000535 IPR000206 Ribosomal protein L7/L12 ABE28_000535 IPR013823 Ribosomal protein L7/L12, C-terminal ABE28_000540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000540 IPR007848 Methyltransferase small domain ABE28_000545 IPR037034 RNA polymerase Rpb2, domain 2 superfamily ABE28_000545 IPR014724 RNA polymerase Rpb2, OB-fold ABE28_000545 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily ABE28_000545 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain ABE28_000545 IPR015712 DNA-directed RNA polymerase, subunit 2 ABE28_000545 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain ABE28_000545 IPR042107 DNA-directed RNA polymerase, beta subunit, external 1 domain superfamily ABE28_000545 IPR007641 RNA polymerase Rpb2, domain 7 ABE28_000545 IPR007645 RNA polymerase Rpb2, domain 3 ABE28_000545 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type ABE28_000545 IPR007121 RNA polymerase, beta subunit, conserved site ABE28_000545 IPR007644 RNA polymerase, beta subunit, protrusion ABE28_000545 IPR007642 RNA polymerase Rpb2, domain 2 ABE28_000550 IPR007066 RNA polymerase Rpb1, domain 3 ABE28_000550 IPR000722 RNA polymerase, alpha subunit ABE28_000550 IPR006592 RNA polymerase, N-terminal ABE28_000550 IPR007083 RNA polymerase Rpb1, domain 4 ABE28_000550 IPR042102 RNA polymerase Rpb1, domain 3 superfamily ABE28_000550 IPR007081 RNA polymerase Rpb1, domain 5 ABE28_000550 IPR038120 RNA polymerase Rpb1, funnel domain superfamily ABE28_000550 IPR007080 RNA polymerase Rpb1, domain 1 ABE28_000550 IPR012754 DNA-directed RNA polymerase, subunit beta-prime ABE28_000555 IPR029064 50S ribosomal protein L30e-like ABE28_000555 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 ABE28_000555 IPR023460 Ribosomal protein L7Ae, putative ABE28_000560 IPR006032 Ribosomal protein S12/S23 ABE28_000560 IPR005679 Ribosomal protein S12, bacterial-type ABE28_000560 IPR012340 Nucleic acid-binding, OB-fold ABE28_000565 IPR036823 Ribosomal protein S7 domain superfamily ABE28_000565 IPR023798 Ribosomal protein S7 domain ABE28_000565 IPR020606 Ribosomal protein S7, conserved site ABE28_000565 IPR005717 Ribosomal protein S7, bacterial/organellar-type ABE28_000565 IPR000235 Ribosomal protein S5/S7 ABE28_000570 IPR035649 EFG, domain V ABE28_000570 IPR041095 Elongation Factor G, domain II ABE28_000570 IPR009022 Elongation factor G, domain III ABE28_000570 IPR005517 Translation elongation factor EFG/EF2, domain IV ABE28_000570 IPR035647 EF-G domain III/V-like ABE28_000570 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000570 IPR000795 Transcription factor, GTP-binding domain ABE28_000570 IPR004540 Translation elongation factor EFG/EF2 ABE28_000570 IPR004161 Translation elongation factor EFTu-like, domain 2 ABE28_000570 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000570 IPR000640 Elongation factor EFG, domain V-like ABE28_000570 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000570 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000570 IPR031157 Tr-type G domain, conserved site ABE28_000570 IPR005225 Small GTP-binding protein domain ABE28_000575 IPR033720 Elongation factor Tu, domain 2 ABE28_000575 IPR004161 Translation elongation factor EFTu-like, domain 2 ABE28_000575 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain ABE28_000575 IPR031157 Tr-type G domain, conserved site ABE28_000575 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000575 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle ABE28_000575 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABE28_000575 IPR005225 Small GTP-binding protein domain ABE28_000575 IPR000795 Transcription factor, GTP-binding domain ABE28_000575 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ABE28_000575 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000580 IPR001848 Ribosomal protein S10 ABE28_000580 IPR018268 Ribosomal protein S10, conserved site ABE28_000580 IPR027486 Ribosomal protein S10 domain ABE28_000580 IPR036838 Ribosomal protein S10 domain superfamily ABE28_000585 IPR019926 Ribosomal protein L3, conserved site ABE28_000585 IPR019927 Ribosomal protein L3, bacterial/organelle-type ABE28_000585 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000585 IPR000597 Ribosomal protein L3 ABE28_000590 IPR002136 Ribosomal protein L4/L1e ABE28_000590 IPR023574 Ribosomal protein L4 domain superfamily ABE28_000590 IPR013005 50S ribosomal protein uL4 ABE28_000595 IPR001014 Ribosomal protein L23/L25, conserved site ABE28_000595 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_000595 IPR013025 Ribosomal protein L25/L23 ABE28_000595 IPR012678 Ribosomal protein L23/L15e core domain superfamily ABE28_000600 IPR022666 Ribosomal Proteins L2, RNA binding domain ABE28_000600 IPR008991 Translation protein SH3-like domain superfamily ABE28_000600 IPR014726 Ribosomal protein L2, domain 3 ABE28_000600 IPR022671 Ribosomal protein L2, conserved site ABE28_000600 IPR022669 Ribosomal protein L2, C-terminal ABE28_000600 IPR005880 Ribosomal protein L2, bacterial/organellar-type ABE28_000600 IPR014722 Ribosomal protein L2, domain 2 ABE28_000600 IPR012340 Nucleic acid-binding, OB-fold ABE28_000600 IPR002171 Ribosomal protein L2 ABE28_000605 IPR023575 Ribosomal protein S19, superfamily ABE28_000605 IPR020934 Ribosomal protein S19 conserved site ABE28_000605 IPR005732 Ribosomal protein S19, bacterial-type ABE28_000605 IPR002222 Ribosomal protein S19/S15 ABE28_000610 IPR018260 Ribosomal protein L22/L17, conserved site ABE28_000610 IPR001063 Ribosomal protein L22/L17 ABE28_000610 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type ABE28_000610 IPR036394 Ribosomal protein L22/L17 superfamily ABE28_000615 IPR004044 K Homology domain, type 2 ABE28_000615 IPR018280 Ribosomal protein S3, conserved site ABE28_000615 IPR036419 Ribosomal protein S3, C-terminal domain superfamily ABE28_000615 IPR001351 Ribosomal protein S3, C-terminal ABE28_000615 IPR005704 Ribosomal protein S3, bacterial-type ABE28_000615 IPR009019 K homology domain superfamily, prokaryotic type ABE28_000615 IPR015946 K homology domain-like, alpha/beta ABE28_000615 IPR004087 K Homology domain ABE28_000620 IPR016180 Ribosomal protein L10e/L16 ABE28_000620 IPR036920 Ribosomal protein L10e/L16 superfamily ABE28_000620 IPR000114 Ribosomal protein L16 ABE28_000620 IPR020798 Ribosomal protein L16, conserved site ABE28_000625 IPR018254 Ribosomal protein L29, conserved site ABE28_000625 IPR001854 Ribosomal protein L29/L35 ABE28_000625 IPR036049 Ribosomal protein L29/L35 superfamily ABE28_000630 IPR019984 30S ribosomal protein S17 ABE28_000630 IPR012340 Nucleic acid-binding, OB-fold ABE28_000630 IPR019979 Ribosomal protein S17, conserved site ABE28_000630 IPR000266 Ribosomal protein S17/S11 ABE28_000635 IPR036853 Ribosomal protein L14 superfamily ABE28_000635 IPR000218 Ribosomal protein L14P ABE28_000635 IPR005745 Ribosomal protein L14P, bacterial-type ABE28_000635 IPR019972 Ribosomal protein L14P, conserved site ABE28_000640 IPR003256 Ribosomal protein L24 ABE28_000640 IPR014722 Ribosomal protein L2, domain 2 ABE28_000640 IPR005824 KOW ABE28_000640 IPR041988 Ribosomal Protein L26/L24, KOW domain ABE28_000640 IPR005825 Ribosomal protein L24/L26, conserved site ABE28_000640 IPR008991 Translation protein SH3-like domain superfamily ABE28_000645 IPR031310 Ribosomal protein L5, N-terminal ABE28_000645 IPR022803 Ribosomal protein L5 domain superfamily ABE28_000645 IPR002132 Ribosomal protein L5 ABE28_000645 IPR020930 Ribosomal protein L5, bacterial-type ABE28_000645 IPR020929 Ribosomal protein L5, conserved site ABE28_000645 IPR031309 Ribosomal protein L5, C-terminal ABE28_000650 IPR001209 Ribosomal protein S14 ABE28_000650 IPR023053 Ribosomal protein S14, type Z ABE28_000650 IPR018271 Ribosomal protein S14, conserved site ABE28_000655 IPR035987 Ribosomal protein S8 superfamily ABE28_000655 IPR000630 Ribosomal protein S8 ABE28_000660 IPR020040 Ribosomal protein L6, alpha-beta domain ABE28_000660 IPR019906 Ribosomal protein L6, bacterial-type ABE28_000660 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily ABE28_000660 IPR000702 Ribosomal protein L6 ABE28_000660 IPR002358 Ribosomal protein L6, conserved site ABE28_000665 IPR004389 Ribosomal protein L18, bacterial-type ABE28_000665 IPR005484 Ribosomal protein L18 ABE28_000670 IPR018192 Ribosomal protein S5, N-terminal, conserved site ABE28_000670 IPR013810 Ribosomal protein S5, N-terminal ABE28_000670 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000670 IPR005712 Ribosomal protein S5, bacterial-type ABE28_000670 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000670 IPR005324 Ribosomal protein S5, C-terminal ABE28_000670 IPR000851 Ribosomal protein S5 ABE28_000675 IPR018038 Ribosomal protein L30, conserved site ABE28_000675 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ABE28_000675 IPR005996 Ribosomal protein L30, bacterial-type ABE28_000675 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ABE28_000680 IPR001196 Ribosomal protein L15, conserved site ABE28_000680 IPR005749 Ribosomal protein L15, bacterial-type ABE28_000680 IPR030878 Ribosomal protein L15 ABE28_000680 IPR021131 Ribosomal protein L18e/L15P ABE28_000680 IPR036227 Ribosomal L18e/L15P superfamily ABE28_000685 IPR030659 SecY conserved site ABE28_000685 IPR023201 SecY domain superfamily ABE28_000685 IPR002208 SecY/SEC61-alpha family ABE28_000685 IPR026593 Protein translocase subunit SecY ABE28_000690 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000690 IPR007862 Adenylate kinase, active site lid domain ABE28_000690 IPR033690 Adenylate kinase, conserved site ABE28_000690 IPR000850 Adenylate kinase/UMP-CMP kinase ABE28_000690 IPR006259 Adenylate kinase subfamily ABE28_000695 IPR006196 RNA-binding domain, S1, IF1 type ABE28_000695 IPR022967 RNA-binding domain, S1 ABE28_000695 IPR012340 Nucleic acid-binding, OB-fold ABE28_000695 IPR004368 Translation initiation factor IF-1 ABE28_000700 IPR000473 Ribosomal protein L36 ABE28_000700 IPR035977 Ribosomal protein L36 superfamily ABE28_000705 IPR010979 Ribosomal protein S13-like, H2TH ABE28_000705 IPR018269 Ribosomal protein S13, conserved site ABE28_000705 IPR019980 Ribosomal protein S13, bacterial-type ABE28_000705 IPR001892 Ribosomal protein S13 ABE28_000705 IPR027437 30s ribosomal protein S13, C-terminal ABE28_000710 IPR001971 Ribosomal protein S11 ABE28_000710 IPR019981 Ribosomal protein S11, bacterial-type ABE28_000710 IPR018102 Ribosomal S11, conserved site ABE28_000710 IPR036967 Ribosomal protein S11 superfamily ABE28_000715 IPR036603 RNA polymerase, RBP11-like subunit ABE28_000715 IPR011260 RNA polymerase, alpha subunit, C-terminal ABE28_000715 IPR036643 DNA-directed RNA polymerase, insert domain superfamily ABE28_000715 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type ABE28_000715 IPR011262 DNA-directed RNA polymerase, insert domain ABE28_000715 IPR011773 DNA-directed RNA polymerase, alpha subunit ABE28_000720 IPR000456 Ribosomal protein L17 ABE28_000720 IPR036373 Ribosomal protein L17 superfamily ABE28_000725 IPR015856 ABC transporter, CbiO/EcfA subunit ABE28_000725 IPR017871 ABC transporter, conserved site ABE28_000725 IPR003439 ABC transporter-like ABE28_000725 IPR003593 AAA+ ATPase domain ABE28_000725 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000725 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 ABE28_000730 IPR003439 ABC transporter-like ABE28_000730 IPR017871 ABC transporter, conserved site ABE28_000730 IPR015856 ABC transporter, CbiO/EcfA subunit ABE28_000730 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 ABE28_000730 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000730 IPR003593 AAA+ ATPase domain ABE28_000740 IPR020095 Pseudouridine synthase I, TruA, C-terminal ABE28_000740 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain ABE28_000740 IPR001406 Pseudouridine synthase I, TruA ABE28_000740 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_000750 IPR000754 Ribosomal protein S9 ABE28_000750 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000750 IPR020574 Ribosomal protein S9, conserved site ABE28_000750 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000750 IPR023035 Ribosomal protein S9, bacterial/plastid ABE28_000755 IPR036259 MFS transporter superfamily ABE28_000755 IPR020846 Major facilitator superfamily domain ABE28_000755 IPR011701 Major facilitator superfamily ABE28_000755 IPR004638 Drug resistance transporter EmrB-like ABE28_000775 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD ABE28_000775 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ABE28_000780 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000780 IPR000808 Mrp, conserved site ABE28_000780 IPR019591 Mrp/NBP35 ATP-binding protein ABE28_000780 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABE28_000785 IPR041262 Spore germination GerD, central core domain ABE28_000790 IPR024164 KinB-signalling pathway activation protein ABE28_000795 IPR002509 NodB homology domain ABE28_000795 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_000795 IPR014132 Sporulation polysaccharide deacetylase, PdaB ABE28_000865 IPR014033 Arginase ABE28_000865 IPR006035 Ureohydrolase ABE28_000865 IPR023696 Ureohydrolase domain superfamily ABE28_000865 IPR020855 Ureohydrolase, manganese-binding site ABE28_000875 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_000875 IPR013325 RNA polymerase sigma factor, region 2 ABE28_000875 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000875 IPR014294 RNA polymerase sigma-W, bacillaceae ABE28_000875 IPR014284 RNA polymerase sigma-70 like domain ABE28_000875 IPR039425 RNA polymerase sigma-70 like ABE28_000875 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000875 IPR007627 RNA polymerase sigma-70 region 2 ABE28_000875 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_000880 IPR027383 Putative zinc-finger ABE28_000885 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_000885 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000885 IPR034701 Diadenylate cyclase CdaA ABE28_000885 IPR014046 Diadenylate cyclase ABE28_000890 IPR012505 YbbR-like ABE28_000895 IPR006352 Phosphoglucosamine mutase, bacterial type ABE28_000895 IPR005841 Alpha-D-phosphohexomutase superfamily ABE28_000895 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ABE28_000895 IPR016066 Alpha-D-phosphohexomutase, conserved site ABE28_000895 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ABE28_000895 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ABE28_000895 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ABE28_000895 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ABE28_000895 IPR005843 Alpha-D-phosphohexomutase, C-terminal ABE28_000900 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_000900 IPR017932 Glutamine amidotransferase type 2 domain ABE28_000900 IPR035466 GlmS/AgaS, SIS domain 1 ABE28_000900 IPR035490 GlmS/FrlB, SIS domain 2 ABE28_000900 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising ABE28_000900 IPR001347 Sugar isomerase (SIS) ABE28_000930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_000930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_000930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_000930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_000930 IPR005467 Histidine kinase domain ABE28_000930 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_000930 IPR003660 HAMP domain ABE28_000935 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000935 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_000935 IPR001789 Signal transduction response regulator, receiver domain ABE28_000935 IPR039420 Transcriptional regulatory protein WalR-like ABE28_000935 IPR011006 CheY-like superfamily ABE28_000940 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000940 IPR039421 Type I protein exporter ABE28_000940 IPR003439 ABC transporter-like ABE28_000940 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_000940 IPR011527 ABC transporter type 1, transmembrane domain ABE28_000940 IPR003593 AAA+ ATPase domain ABE28_000940 IPR017871 ABC transporter, conserved site ABE28_000945 IPR016143 Citrate synthase-like, small alpha subdomain ABE28_000945 IPR019810 Citrate synthase active site ABE28_000945 IPR016142 Citrate synthase-like, large alpha subdomain ABE28_000945 IPR002020 Citrate synthase ABE28_000945 IPR024176 Citrate synthase, bacterial-type ABE28_000945 IPR036969 Citrate synthase superfamily ABE28_000950 IPR042188 MmgE/PrpD superfamily, domain 2 ABE28_000950 IPR012705 2-methylcitrate dehydratase PrpD ABE28_000950 IPR036148 MmgE/PrpD superfamily ABE28_000950 IPR042183 MmgE/PrpD superfamily, domain 1 ABE28_000950 IPR005656 MmgE/PrpD ABE28_000955 IPR039556 ICL/PEPM domain ABE28_000955 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site ABE28_000955 IPR012695 2-methylisocitrate lyase ABE28_000955 IPR040442 Pyruvate kinase-like domain superfamily ABE28_000955 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_000960 IPR011127 D-alanine--D-alanine ligase, N-terminal domain ABE28_000960 IPR011761 ATP-grasp fold ABE28_000960 IPR013815 ATP-grasp fold, subdomain 1 ABE28_000960 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site ABE28_000960 IPR005905 D-alanine--D-alanine ligase ABE28_000960 IPR011095 D-alanine--D-alanine ligase, C-terminal ABE28_000960 IPR016185 Pre-ATP-grasp domain superfamily ABE28_000965 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_000965 IPR033479 Double Cache domain 1 ABE28_000965 IPR029151 Periplasmic sensor-like domain superfamily ABE28_000965 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_000965 IPR003660 HAMP domain ABE28_000970 IPR011129 Cold shock domain ABE28_000970 IPR019844 Cold-shock (CSD) domain ABE28_000970 IPR012340 Nucleic acid-binding, OB-fold ABE28_000970 IPR002059 Cold-shock protein, DNA-binding ABE28_000970 IPR012156 Cold shock, CspA ABE28_000985 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000985 IPR039425 RNA polymerase sigma-70 like ABE28_000985 IPR014284 RNA polymerase sigma-70 like domain ABE28_000985 IPR014296 RNA polymerase sigma-M, bacillaceae ABE28_000985 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_000985 IPR007627 RNA polymerase sigma-70 region 2 ABE28_000985 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_000985 IPR013325 RNA polymerase sigma factor, region 2 ABE28_000985 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000995 IPR030394 HflX-type guanine nucleotide-binding (G) domain ABE28_000995 IPR032305 GTP-binding protein, middle domain ABE28_000995 IPR006073 GTP binding domain ABE28_000995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000995 IPR016496 GTPase HflX ABE28_000995 IPR025121 GTPase HflX, N-terminal ABE28_000995 IPR042108 GTPase HflX, N-terminal domain superfamily ABE28_001005 IPR038965 Transposase InsF-like ABE28_001005 IPR036397 Ribonuclease H superfamily ABE28_001005 IPR001584 Integrase, catalytic core ABE28_001005 IPR012337 Ribonuclease H-like superfamily ABE28_001005 IPR025948 HTH-like domain ABE28_001010 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_001010 IPR028261 Dihydroprymidine dehydrogenase domain II ABE28_001010 IPR023753 FAD/NAD(P)-binding domain ABE28_001010 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 ABE28_001010 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_001010 IPR009051 Alpha-helical ferredoxin ABE28_001015 IPR023359 Dihydroorotate dehydrogenase A, chain A, domain 2 ABE28_001015 IPR005720 Dihydroorotate dehydrogenase domain ABE28_001015 IPR024920 Dihydroorotate dehydrogenase, class 1 ABE28_001015 IPR013785 Aldolase-type TIM barrel ABE28_001015 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 ABE28_001015 IPR001295 Dihydroorotate dehydrogenase, conserved site ABE28_001015 IPR033888 Dihydroorotate dehydrogenase, class 1B ABE28_001020 IPR011778 Hydantoinase/dihydropyrimidinase ABE28_001020 IPR032466 Metal-dependent hydrolase ABE28_001020 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_001020 IPR006680 Amidohydrolase-related ABE28_001025 IPR038271 Purine-cytosine permease superfamily ABE28_001025 IPR001248 Purine-cytosine permease ABE28_001035 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_001035 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_001035 IPR041522 CdaR, GGDEF-like domain ABE28_001035 IPR008599 Putative sugar diacid recognition ABE28_001040 IPR001206 Diacylglycerol kinase, catalytic domain ABE28_001040 IPR005218 Diacylglycerol/lipid kinase ABE28_001040 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_001040 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_001045 IPR018422 Cation/H+ exchanger, CPA1 family ABE28_001045 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria ABE28_001045 IPR006153 Cation/H+ exchanger ABE28_001060 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ABE28_001060 IPR013611 Transport-associated OB, type 2 ABE28_001060 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_001060 IPR003593 AAA+ ATPase domain ABE28_001060 IPR003439 ABC transporter-like ABE28_001060 IPR017871 ABC transporter, conserved site ABE28_001060 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001065 IPR035906 MetI-like superfamily ABE28_001065 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_001070 IPR035906 MetI-like superfamily ABE28_001070 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_001075 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein ABE28_001075 IPR006059 Bacterial extracellular solute-binding protein ABE28_001080 IPR023059 Foldase protein PrsA ABE28_001080 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ABE28_001080 IPR027304 Trigger factor/SurA domain superfamily ABE28_001095 IPR004869 Membrane transport protein MMPL domain ABE28_001095 IPR000731 Sterol-sensing domain ABE28_001100 IPR001347 Sugar isomerase (SIS) ABE28_001100 IPR035472 RpiR-like, SIS domain ABE28_001100 IPR022951 Uncharacterised protein family UPF0309 ABE28_001110 IPR037171 NagB/RpiA transferase-like ABE28_001110 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase ABE28_001110 IPR004547 Glucosamine-6-phosphate isomerase ABE28_001110 IPR018321 Glucosamine-6-phosphate isomerase, conserved site ABE28_001115 IPR003764 N-acetylglucosamine-6-phosphate deacetylase ABE28_001115 IPR032466 Metal-dependent hydrolase ABE28_001115 IPR006680 Amidohydrolase-related ABE28_001115 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_001120 IPR003352 Phosphotransferase system, EIIC ABE28_001120 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_001120 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_001120 IPR036878 Glucose permease domain IIB ABE28_001120 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_001120 IPR011055 Duplicated hybrid motif ABE28_001120 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component ABE28_001120 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_001125 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001125 IPR017871 ABC transporter, conserved site ABE28_001125 IPR003439 ABC transporter-like ABE28_001125 IPR003593 AAA+ ATPase domain ABE28_001130 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_001130 IPR037294 ABC transporter, BtuC-like ABE28_001135 IPR037294 ABC transporter, BtuC-like ABE28_001135 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_001140 IPR002491 ABC transporter periplasmic binding domain ABE28_001145 IPR029058 Alpha/Beta hydrolase fold ABE28_001145 IPR000801 Putative esterase ABE28_001150 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_001150 IPR036291 NAD(P)-binding domain superfamily ABE28_001150 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase ABE28_001150 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_001155 IPR005801 ADC synthase ABE28_001155 IPR004561 Isochorismate synthase ABE28_001155 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_001160 IPR011963 2,3-dihydroxybenzoate-AMP ligase ABE28_001160 IPR020845 AMP-binding, conserved site ABE28_001160 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_001160 IPR000873 AMP-dependent synthetase/ligase ABE28_001165 IPR009081 Phosphopantetheine binding ACP domain ABE28_001165 IPR036380 Isochorismatase-like superfamily ABE28_001165 IPR016291 Isochorismatase ABE28_001165 IPR036736 ACP-like superfamily ABE28_001165 IPR000868 Isochorismatase-like ABE28_001170 IPR001031 Thioesterase ABE28_001170 IPR010071 Amino acid adenylation domain ABE28_001170 IPR036736 ACP-like superfamily ABE28_001170 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_001170 IPR020845 AMP-binding, conserved site ABE28_001170 IPR000873 AMP-dependent synthetase/ligase ABE28_001170 IPR042099 AMP-dependent synthetase-like superfamily ABE28_001170 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ABE28_001170 IPR001242 Condensation domain ABE28_001170 IPR020806 Polyketide synthase, phosphopantetheine-binding domain ABE28_001170 IPR020802 Polyketide synthase, thioesterase domain ABE28_001170 IPR009081 Phosphopantetheine binding ACP domain ABE28_001170 IPR029058 Alpha/Beta hydrolase fold ABE28_001175 IPR005153 MbtH-like domain ABE28_001175 IPR037407 MbtH-like protein ABE28_001175 IPR038020 MbtH-like domain superfamily ABE28_001180 IPR036259 MFS transporter superfamily ABE28_001180 IPR004638 Drug resistance transporter EmrB-like ABE28_001180 IPR011701 Major facilitator superfamily ABE28_001180 IPR020846 Major facilitator superfamily domain ABE28_001185 IPR037143 4'-phosphopantetheinyl transferase domain superfamily ABE28_001185 IPR008278 4'-phosphopantetheinyl transferase domain ABE28_001185 IPR004568 Phosphopantetheine-protein transferase domain ABE28_001190 IPR005829 Sugar transporter, conserved site ABE28_001190 IPR036259 MFS transporter superfamily ABE28_001190 IPR020846 Major facilitator superfamily domain ABE28_001190 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family ABE28_001190 IPR011701 Major facilitator superfamily ABE28_001200 IPR003960 ATPase, AAA-type, conserved site ABE28_001200 IPR000642 Peptidase M41 ABE28_001200 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001200 IPR037219 Peptidase M41-like ABE28_001200 IPR003959 ATPase, AAA-type, core ABE28_001200 IPR005936 Peptidase, FtsH ABE28_001200 IPR003593 AAA+ ATPase domain ABE28_001200 IPR041569 AAA ATPase, AAA+ lid domain ABE28_001205 IPR036821 Peptide deformylase superfamily ABE28_001205 IPR023635 Peptide deformylase ABE28_001215 IPR036259 MFS transporter superfamily ABE28_001215 IPR004638 Drug resistance transporter EmrB-like ABE28_001215 IPR011701 Major facilitator superfamily ABE28_001215 IPR020846 Major facilitator superfamily domain ABE28_001220 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001220 IPR000835 MarR-type HTH domain ABE28_001220 IPR011991 ArsR-like helix-turn-helix domain ABE28_001220 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001225 IPR038352 Imelysin-like domain superfamily ABE28_001225 IPR034981 EfeO/Algp7, imelysin-like domain ABE28_001225 IPR018976 Imelysin-like domain ABE28_001230 IPR011008 Dimeric alpha-beta barrel ABE28_001230 IPR006313 Deferrochelatase/peroxidase EfeB ABE28_001230 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_001230 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABE28_001230 IPR006314 Dyp-type peroxidase ABE28_001235 IPR004923 Iron permease FTR1/Fip1/EfeU ABE28_001240 IPR009061 Putative DNA-binding domain superfamily ABE28_001240 IPR000551 MerR-type HTH domain ABE28_001245 IPR005170 Transporter-associated domain ABE28_001245 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_001245 IPR002550 CNNM, transmembrane domain ABE28_001245 IPR000644 CBS domain ABE28_001245 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_001250 IPR001789 Signal transduction response regulator, receiver domain ABE28_001250 IPR005467 Histidine kinase domain ABE28_001250 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_001250 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ABE28_001250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_001250 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_001250 IPR036641 HPT domain superfamily ABE28_001250 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001250 IPR011006 CheY-like superfamily ABE28_001250 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001255 IPR000780 MCP methyltransferase, CheR-type ABE28_001255 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_001255 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ABE28_001255 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ABE28_001260 IPR000014 PAS domain ABE28_001260 IPR035965 PAS domain superfamily ABE28_001260 IPR036457 PPM-type phosphatase domain superfamily ABE28_001260 IPR001932 PPM-type phosphatase domain ABE28_001270 IPR012354 Esterase/lipase ABE28_001270 IPR029058 Alpha/Beta hydrolase fold ABE28_001270 IPR022742 Serine aminopeptidase, S33 ABE28_001300 IPR010998 Integrase/recombinase, N-terminal ABE28_001300 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_001300 IPR023009 Tyrosine recombinase XerC/XerD ABE28_001300 IPR011931 Tyrosine recombinase XerC ABE28_001300 IPR004107 Integrase, SAM-like, N-terminal ABE28_001300 IPR002104 Integrase, catalytic domain ABE28_001300 IPR013762 Integrase-like, catalytic domain superfamily ABE28_001305 IPR001036 Acriflavin resistance protein ABE28_001305 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_001310 IPR001647 DNA-binding HTH domain, TetR-type ABE28_001310 IPR009057 Homeobox-like domain superfamily ABE28_001310 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_001315 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_001315 IPR001206 Diacylglycerol kinase, catalytic domain ABE28_001315 IPR005218 Diacylglycerol/lipid kinase ABE28_001315 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_001330 IPR033380 Glutamate-aspartate symport protein GltP/GltT ABE28_001330 IPR001991 Sodium:dicarboxylate symporter ABE28_001330 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_001330 IPR036458 Sodium:dicarboxylate symporter superfamily ABE28_001340 IPR011127 D-alanine--D-alanine ligase, N-terminal domain ABE28_001340 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site ABE28_001340 IPR011761 ATP-grasp fold ABE28_001340 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001340 IPR005905 D-alanine--D-alanine ligase ABE28_001340 IPR011095 D-alanine--D-alanine ligase, C-terminal ABE28_001340 IPR013815 ATP-grasp fold, subdomain 1 ABE28_001345 IPR036615 Mur ligase, C-terminal domain superfamily ABE28_001345 IPR013221 Mur ligase, central ABE28_001345 IPR004101 Mur ligase, C-terminal ABE28_001345 IPR000713 Mur ligase, N-terminal catalytic domain ABE28_001345 IPR035911 MurE/MurF, N-terminal ABE28_001345 IPR036565 Mur-like, catalytic domain superfamily ABE28_001345 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase ABE28_001355 IPR011545 DEAD/DEAH box helicase domain ABE28_001355 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_001355 IPR030880 DEAD-box ATP-dependent RNA helicase CshA ABE28_001355 IPR001650 Helicase, C-terminal ABE28_001355 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001355 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABE28_001355 IPR014014 RNA helicase, DEAD-box type, Q motif ABE28_001360 IPR005182 Domain of unknown function DUF304 ABE28_001365 IPR014529 Uncharacterised conserved protein UCP026631 ABE28_001365 IPR005182 Domain of unknown function DUF304 ABE28_001370 IPR022764 Peptidase S54, rhomboid domain ABE28_001370 IPR035952 Rhomboid-like superfamily ABE28_001375 IPR002582 Holo-[acyl carrier protein] synthase ABE28_001375 IPR008278 4'-phosphopantetheinyl transferase domain ABE28_001375 IPR037143 4'-phosphopantetheinyl transferase domain superfamily ABE28_001375 IPR004568 Phosphopantetheine-protein transferase domain ABE28_001380 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABE28_001390 IPR013321 Arc-type ribbon-helix-helix ABE28_001390 IPR002145 Ribbon-helix-helix protein, CopG ABE28_001390 IPR010985 Ribbon-helix-helix ABE28_001395 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor ABE28_001395 IPR003477 mRNA interferase PemK-like ABE28_001400 IPR036513 STAS domain superfamily ABE28_001400 IPR002645 STAS domain ABE28_001400 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain ABE28_001400 IPR012292 Globin/Protoglobin ABE28_001405 IPR036513 STAS domain superfamily ABE28_001405 IPR002645 STAS domain ABE28_001410 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001410 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001415 IPR017944 KaiA/RbsU helical domain superfamily ABE28_001415 IPR001932 PPM-type phosphatase domain ABE28_001415 IPR036457 PPM-type phosphatase domain superfamily ABE28_001415 IPR014787 Phosphoserine phosphatase RsbU, N-terminal ABE28_001420 IPR003658 Anti-sigma factor antagonist ABE28_001420 IPR036513 STAS domain superfamily ABE28_001420 IPR002645 STAS domain ABE28_001425 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001425 IPR010193 Serine-protein kinase RsbW ABE28_001425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001430 IPR013325 RNA polymerase sigma factor, region 2 ABE28_001430 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001430 IPR007624 RNA polymerase sigma-70 region 3 ABE28_001430 IPR014284 RNA polymerase sigma-70 like domain ABE28_001430 IPR014322 RNA polymerase sigma-B/F/G type ABE28_001430 IPR007630 RNA polymerase sigma-70 region 4 ABE28_001430 IPR000943 RNA polymerase sigma-70 ABE28_001430 IPR014288 RNA polymerase sigma-B factor ABE28_001430 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_001430 IPR007627 RNA polymerase sigma-70 region 2 ABE28_001435 IPR001932 PPM-type phosphatase domain ABE28_001435 IPR036457 PPM-type phosphatase domain superfamily ABE28_001435 IPR039248 Phosphatase RsbX ABE28_001440 IPR023319 Tex-like protein, HTH domain superfamily ABE28_001440 IPR018974 Tex-like protein, N-terminal ABE28_001440 IPR023323 Tex-like domain superfamily ABE28_001440 IPR003029 S1 domain ABE28_001440 IPR022967 RNA-binding domain, S1 ABE28_001440 IPR010994 RuvA domain 2-like ABE28_001440 IPR012337 Ribonuclease H-like superfamily ABE28_001440 IPR012340 Nucleic acid-binding, OB-fold ABE28_001440 IPR041692 HHH domain 9 ABE28_001440 IPR006641 YqgF/RNase H-like domain ABE28_001440 IPR037027 YqgF/RNase H-like domain superfamily ABE28_001440 IPR032639 Tex protein, YqgF-like domain ABE28_001445 IPR023524 Uncharacterised protein family SprT-like ABE28_001445 IPR006640 SprT-like ABE28_001525 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE ABE28_001525 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001530 IPR000905 Gcp-like domain ABE28_001530 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB ABE28_001535 IPR016181 Acyl-CoA N-acyltransferase ABE28_001535 IPR000182 GNAT domain ABE28_001535 IPR006464 N-acetyltransferase RimI/Ard1 ABE28_001540 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD ABE28_001540 IPR017860 Peptidase M22, conserved site ABE28_001540 IPR017861 Kae1/TsaD family ABE28_001540 IPR000905 Gcp-like domain ABE28_001545 IPR017871 ABC transporter, conserved site ABE28_001545 IPR003439 ABC transporter-like ABE28_001545 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ABE28_001545 IPR003593 AAA+ ATPase domain ABE28_001545 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001545 IPR032524 ABC transporter Uup, C-terminal ABE28_001545 IPR032781 ABC-transporter extension domain ABE28_001550 IPR023045 Molybdenum cofactor biosynthesis C ABE28_001550 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily ABE28_001550 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain ABE28_001555 IPR022876 Redox-sensing transcriptional repressor Rex ABE28_001555 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001555 IPR009718 Rex DNA-binding, C-terminal domain ABE28_001555 IPR036291 NAD(P)-binding domain superfamily ABE28_001555 IPR003781 CoA-binding ABE28_001555 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001565 IPR003675 CAAX prenyl protease 2 ABE28_001570 IPR011032 GroES-like superfamily ABE28_001570 IPR037124 GroES chaperonin superfamily ABE28_001570 IPR020818 GroES chaperonin family ABE28_001570 IPR018369 Chaperonin GroES, conserved site ABE28_001600 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site ABE28_001600 IPR029017 Enolase-like, N-terminal ABE28_001600 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_001600 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_001600 IPR029065 Enolase C-terminal domain-like ABE28_001600 IPR034603 Dipeptide epimerase ABE28_001600 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_001605 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_001605 IPR038765 Papain-like cysteine peptidase superfamily ABE28_001605 IPR041382 Bacterial dipeptidyl-peptidase SH3 domain ABE28_001615 IPR002818 DJ-1/PfpI ABE28_001615 IPR029062 Class I glutamine amidotransferase-like ABE28_001625 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001625 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_001625 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_001625 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001625 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_001625 IPR005467 Histidine kinase domain ABE28_001625 IPR036641 HPT domain superfamily ABE28_001625 IPR011006 CheY-like superfamily ABE28_001625 IPR001789 Signal transduction response regulator, receiver domain ABE28_001625 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ABE28_001635 IPR003474 Gluconate transporter ABE28_001640 IPR005255 PdxA family ABE28_001645 IPR042213 Nucleotide-binding, C-terminal domain superfamily ABE28_001645 IPR031475 Nucleotide-binding C-terminal domain ABE28_001645 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ABE28_001645 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ABE28_001650 IPR014036 DeoR C-terminal sensor domain ABE28_001650 IPR037171 NagB/RpiA transferase-like ABE28_001650 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ABE28_001650 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001650 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001650 IPR001034 DeoR-type HTH domain ABE28_001655 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001655 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_001655 IPR011711 GntR, C-terminal ABE28_001655 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001655 IPR000524 Transcription regulator HTH, GntR ABE28_001660 IPR006002 Gluconate kinase ABE28_001660 IPR018484 Carbohydrate kinase, FGGY, N-terminal ABE28_001660 IPR018483 Carbohydrate kinase, FGGY, conserved site ABE28_001660 IPR018485 Carbohydrate kinase, FGGY, C-terminal ABE28_001660 IPR000577 Carbohydrate kinase, FGGY ABE28_001665 IPR003474 Gluconate transporter ABE28_001670 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_001670 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_001670 IPR006114 6-phosphogluconate dehydrogenase, C-terminal ABE28_001670 IPR006184 6-phosphogluconate-binding site ABE28_001670 IPR036291 NAD(P)-binding domain superfamily ABE28_001670 IPR006183 6-phosphogluconate dehydrogenase ABE28_001670 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ABE28_001670 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating ABE28_001680 IPR001466 Beta-lactamase-related ABE28_001680 IPR012338 Beta-lactamase/transpeptidase-like ABE28_001685 IPR002491 ABC transporter periplasmic binding domain ABE28_001690 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_001690 IPR037294 ABC transporter, BtuC-like ABE28_001695 IPR037294 ABC transporter, BtuC-like ABE28_001695 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_001700 IPR036482 Hut operon regulatory protein HutP superfamily ABE28_001700 IPR023552 Hut operon regulatory protein HutP, bacillales ABE28_001700 IPR015111 Hut operon regulatory protein HutP ABE28_001705 IPR005921 Histidine ammonia-lyase ABE28_001705 IPR008948 L-Aspartase-like ABE28_001705 IPR001106 Aromatic amino acid lyase ABE28_001705 IPR022313 Phenylalanine/histidine ammonia-lyases, active site ABE28_001705 IPR024083 Fumarase/histidase, N-terminal ABE28_001710 IPR004841 Amino acid permease/ SLC12A domain ABE28_001710 IPR004840 Amino acid permease, conserved site ABE28_001720 IPR017871 ABC transporter, conserved site ABE28_001720 IPR003593 AAA+ ATPase domain ABE28_001720 IPR003439 ABC transporter-like ABE28_001720 IPR000644 CBS domain ABE28_001720 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001720 IPR005892 Glycine betaine transport ATP-binding subunit ABE28_001725 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain ABE28_001735 IPR023186 Inosine/uridine-preferring nucleoside hydrolase ABE28_001735 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB ABE28_001735 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_001735 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site ABE28_001735 IPR036452 Ribonucleoside hydrolase-like ABE28_001740 IPR010310 Type VII secretion system ESAT-6-like ABE28_001740 IPR036689 ESAT-6-like superfamily ABE28_001750 IPR018778 Type VII secretion system EssB ABE28_001755 IPR023839 Firmicutes EssC, C-terminal ABE28_001755 IPR022206 Firmicutes EssC, N-terminal ABE28_001755 IPR002543 FtsK domain ABE28_001755 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001755 IPR003593 AAA+ ATPase domain ABE28_001760 IPR023838 Type VII secretion system EsaA ABE28_001765 IPR020212 ESX secretion system protein YueC ABE28_001765 IPR018920 ESAT-6 secretion machinery protein EssA/YueC ABE28_001770 IPR001207 Transposase, mutator type ABE28_001775 IPR002491 ABC transporter periplasmic binding domain ABE28_001785 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001785 IPR041628 ChlI/MoxR, AAA lid domain ABE28_001785 IPR011703 ATPase, AAA-3 ABE28_001790 IPR002881 Domain of unknown function DUF58 ABE28_001795 IPR002931 Transglutaminase-like ABE28_001795 IPR021878 Protein-glutamine gamma-glutamyltransferase TgpA, N-terminal ABE28_001795 IPR038765 Papain-like cysteine peptidase superfamily ABE28_001795 IPR025403 Domain of unknown function DUF4129 ABE28_001800 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_001800 IPR022310 NAD/GMP synthase ABE28_001800 IPR029062 Class I glutamine amidotransferase-like ABE28_001800 IPR004739 GMP synthase, glutamine amidotransferase ABE28_001800 IPR001674 GMP synthase, C-terminal ABE28_001800 IPR017926 Glutamine amidotransferase ABE28_001800 IPR025777 GMP synthetase ATP pyrophosphatase domain ABE28_001800 IPR022955 GMP synthase ABE28_001805 IPR026033 Azaguanine-like transporters ABE28_001805 IPR006043 Xanthine/uracil/vitamin C permease ABE28_001810 IPR004341 CAT RNA-binding domain ABE28_001810 IPR036650 CAT RNA-binding domain superfamily ABE28_001810 IPR011608 PRD domain ABE28_001810 IPR036634 PRD domain superfamily ABE28_001810 IPR001550 Transcription antiterminator, conserved site ABE28_001815 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ABE28_001815 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_001815 IPR003352 Phosphotransferase system, EIIC ABE28_001815 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_001815 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_001815 IPR036878 Glucose permease domain IIB ABE28_001815 IPR011055 Duplicated hybrid motif ABE28_001815 IPR011299 PTS system glucose-specific IIBC component ABE28_001815 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_001835 IPR005829 Sugar transporter, conserved site ABE28_001835 IPR036259 MFS transporter superfamily ABE28_001835 IPR020846 Major facilitator superfamily domain ABE28_001835 IPR011701 Major facilitator superfamily ABE28_001840 IPR001381 3-dehydroquinate dehydratase type I ABE28_001840 IPR013785 Aldolase-type TIM barrel ABE28_001840 IPR018508 3-dehydroquinate dehydratase, active site ABE28_001845 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal ABE28_001845 IPR022893 Shikimate dehydrogenase family ABE28_001845 IPR036291 NAD(P)-binding domain superfamily ABE28_001845 IPR011342 Shikimate dehydrogenase ABE28_001845 IPR041121 SDH, C-terminal ABE28_001850 IPR005829 Sugar transporter, conserved site ABE28_001850 IPR036259 MFS transporter superfamily ABE28_001850 IPR011701 Major facilitator superfamily ABE28_001850 IPR020846 Major facilitator superfamily domain ABE28_001860 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001860 IPR031322 Shikimate kinase/gluconokinase ABE28_001860 IPR000623 Shikimate kinase/Threonine synthase-like 1 ABE28_001860 IPR023000 Shikimate kinase, conserved site ABE28_001880 IPR025930 NETI protein ABE28_001885 IPR035893 PurE domain superfamily ABE28_001885 IPR024694 PurE, prokaryotic type ABE28_001885 IPR000031 PurE domain ABE28_001885 IPR033747 Class I PurE ABE28_001890 IPR011761 ATP-grasp fold ABE28_001890 IPR011054 Rudiment single hybrid motif ABE28_001890 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit ABE28_001890 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001890 IPR013815 ATP-grasp fold, subdomain 1 ABE28_001890 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABE28_001890 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain ABE28_001895 IPR022761 Fumarate lyase, N-terminal ABE28_001895 IPR008948 L-Aspartase-like ABE28_001895 IPR004769 Adenylosuccinate lyase ABE28_001895 IPR020557 Fumarate lyase, conserved site ABE28_001895 IPR000362 Fumarate lyase family ABE28_001895 IPR024083 Fumarase/histidase, N-terminal ABE28_001895 IPR019468 Adenylosuccinate lyase C-terminal ABE28_001900 IPR018236 SAICAR synthetase, conserved site ABE28_001900 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase ABE28_001900 IPR033934 Bacterial and archaeal 5-aminoimidazole-4-(N-succinylcarboxamide) ribonucleotide synthase ABE28_001900 IPR028923 SAICAR synthetase/ADE2, N-terminal ABE28_001905 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS ABE28_001905 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily ABE28_001910 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ ABE28_001910 IPR029062 Class I glutamine amidotransferase-like ABE28_001910 IPR017926 Glutamine amidotransferase ABE28_001915 IPR016188 PurM-like, N-terminal domain ABE28_001915 IPR010074 Phosphoribosylformylglycinamidine subunit PurL ABE28_001915 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001915 IPR010918 PurM-like, C-terminal domain ABE28_001915 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain ABE28_001915 IPR036921 PurM-like, N-terminal domain superfamily ABE28_001920 IPR035584 Amidophosphoribosyltransferase, N-terminal ABE28_001920 IPR005854 Amidophosphoribosyltransferase ABE28_001920 IPR029057 Phosphoribosyltransferase-like ABE28_001920 IPR000836 Phosphoribosyltransferase domain ABE28_001920 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_001920 IPR017932 Glutamine amidotransferase type 2 domain ABE28_001930 IPR036477 Formyl transferase, N-terminal domain superfamily ABE28_001930 IPR002376 Formyl transferase, N-terminal ABE28_001930 IPR001555 Phosphoribosylglycinamide formyltransferase, active site ABE28_001930 IPR004607 Phosphoribosylglycinamide formyltransferase ABE28_001935 IPR016193 Cytidine deaminase-like ABE28_001935 IPR002695 Bifunctional purine biosynthesis protein PurH-like ABE28_001935 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_001935 IPR024051 AICAR transformylase, duplicated domain superfamily ABE28_001935 IPR011607 Methylglyoxal synthase-like domain ABE28_001940 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily ABE28_001940 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal ABE28_001940 IPR011054 Rudiment single hybrid motif ABE28_001940 IPR011761 ATP-grasp fold ABE28_001940 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001940 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABE28_001940 IPR000115 Phosphoribosylglycinamide synthetase ABE28_001940 IPR020559 Phosphoribosylglycinamide synthetase, conserved site ABE28_001940 IPR020560 Phosphoribosylglycinamide synthetase, C-domain ABE28_001940 IPR013815 ATP-grasp fold, subdomain 1 ABE28_001945 IPR021309 Protein of unknown function DUF2892 ABE28_001950 IPR026912 Adenine deaminase C-terminal domain ABE28_001950 IPR006680 Amidohydrolase-related ABE28_001950 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_001950 IPR032466 Metal-dependent hydrolase ABE28_001950 IPR006679 Adenine deaminase ABE28_001955 IPR021416 Protein of unknown function DUF3048, N-terminal ABE28_001955 IPR023158 YerB-like superfamily ABE28_001955 IPR035328 Protein of unknown function DUF3048, C-terminal domain ABE28_001960 IPR000831 Trp repressor ABE28_001960 IPR038116 TrpR-like superfamily ABE28_001960 IPR010921 Trp repressor/replication initiator ABE28_001960 IPR013368 TrpR homologue YerC/YecD ABE28_001965 IPR038597 GGGP/HepGP synthase superfamily ABE28_001965 IPR039074 GGGP/HepGP synthase group I ABE28_001965 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase ABE28_001970 IPR034739 UvrD/AddA helicase, N-terminal ABE28_001970 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_001970 IPR000212 DNA helicase, UvrD/REP type ABE28_001970 IPR014017 UvrD-like DNA helicase, C-terminal ABE28_001970 IPR013986 DExx box DNA helicase domain superfamily ABE28_001970 IPR005751 ATP-dependent DNA helicase PcrA ABE28_001970 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001975 IPR036420 BRCT domain superfamily ABE28_001975 IPR033136 NAD-dependent DNA ligase, conserved site ABE28_001975 IPR018239 NAD-dependent DNA ligase, active site ABE28_001975 IPR001679 NAD-dependent DNA ligase ABE28_001975 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type ABE28_001975 IPR010994 RuvA domain 2-like ABE28_001975 IPR013839 NAD-dependent DNA ligase, adenylation ABE28_001975 IPR013840 NAD-dependent DNA ligase, N-terminal ABE28_001975 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ABE28_001975 IPR041663 DisA/LigA, helix-hairpin-helix motif ABE28_001975 IPR001357 BRCT domain ABE28_001975 IPR004150 NAD-dependent DNA ligase, OB-fold ABE28_001975 IPR012340 Nucleic acid-binding, OB-fold ABE28_001980 IPR011426 CamS sex pheromone cAM373 ABE28_001985 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C ABE28_001985 IPR003837 Glu-tRNAGln amidotransferase C subunit ABE28_001990 IPR023631 Amidase signature domain ABE28_001990 IPR020556 Amidase, conserved site ABE28_001990 IPR000120 Amidase ABE28_001990 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit ABE28_001990 IPR036928 Amidase signature (AS) superfamily ABE28_001995 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site ABE28_001995 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E ABE28_001995 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit ABE28_001995 IPR042114 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 1 ABE28_001995 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic ABE28_001995 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 ABE28_001995 IPR018027 Asn/Gln amidotransferase ABE28_001995 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ABE28_001995 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like ABE28_002000 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_002000 IPR007627 RNA polymerase sigma-70 region 2 ABE28_002000 IPR013325 RNA polymerase sigma factor, region 2 ABE28_002000 IPR014284 RNA polymerase sigma-70 like domain ABE28_002000 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002000 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_002000 IPR039425 RNA polymerase sigma-70 like ABE28_002020 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_002020 IPR001206 Diacylglycerol kinase, catalytic domain ABE28_002020 IPR005218 Diacylglycerol/lipid kinase ABE28_002020 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_002025 IPR016181 Acyl-CoA N-acyltransferase ABE28_002025 IPR000182 GNAT domain ABE28_002035 IPR010280 (Uracil-5)-methyltransferase family ABE28_002035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_002035 IPR012340 Nucleic acid-binding, OB-fold ABE28_002035 IPR030391 RNA methyltransferase TrmA, conserved site ABE28_002035 IPR030390 RNA methyltransferase TrmA, active site ABE28_002035 IPR002792 TRAM domain ABE28_002040 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_002040 IPR003740 Uncharacterised membrane protein YitT ABE28_002040 IPR019264 Domain of unknown function DUF2179 ABE28_002045 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_002045 IPR007353 Protein of unknown function DUF421 ABE28_002055 IPR016039 Thiolase-like ABE28_002055 IPR010894 Stage V sporulation AD ABE28_002055 IPR038369 Stage V sporulation AD superfamily ABE28_002085 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein ABE28_002090 IPR008863 Toxic anion resistance ABE28_002095 IPR000415 Nitroreductase-like ABE28_002095 IPR029479 Nitroreductase ABE28_002095 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ABE28_002100 IPR036266 SecA, Wing/Scaffold superfamily ABE28_002100 IPR011116 SecA Wing/Scaffold ABE28_002100 IPR011130 SecA, preprotein cross-linking domain ABE28_002100 IPR020937 SecA conserved site ABE28_002100 IPR036670 SecA, preprotein cross-linking domain superfamily ABE28_002100 IPR011115 SecA DEAD-like, N-terminal ABE28_002100 IPR000185 Protein translocase subunit SecA ABE28_002100 IPR004027 SEC-C motif ABE28_002100 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002100 IPR014018 SecA motor DEAD ABE28_002105 IPR015500 Peptidase S8, subtilisin-related ABE28_002105 IPR034202 Subtilisin Carlsberg-like catalytic domain ABE28_002105 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_002105 IPR000209 Peptidase S8/S53 domain ABE28_002105 IPR036852 Peptidase S8/S53 domain superfamily ABE28_002105 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_002105 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_002110 IPR038507 YcnI-like superfamily ABE28_002110 IPR012533 YcnI-like ABE28_002115 IPR008457 Copper resistance protein D ABE28_002115 IPR007348 CopC domain ABE28_002115 IPR032694 Copper transport protein C/D ABE28_002115 IPR014756 Immunoglobulin E-set ABE28_002115 IPR032693 YtkA-like domain ABE28_002125 IPR000014 PAS domain ABE28_002125 IPR035965 PAS domain superfamily ABE28_002125 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_002125 IPR013767 PAS fold ABE28_002125 IPR005467 Histidine kinase domain ABE28_002125 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_002125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002125 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_002125 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002130 IPR015414 Transmembrane protein TMEM64 ABE28_002130 IPR032816 SNARE associated Golgi protein ABE28_002135 IPR010387 Queuosine precursor transporter QueT ABE28_002140 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain ABE28_002140 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily ABE28_002150 IPR024997 Protein of unknown function DUF3892 ABE28_002155 IPR007484 Peptidase M28 ABE28_002155 IPR003137 PA domain ABE28_002170 IPR025968 YwqJ-like deaminase ABE28_002170 IPR027797 Pre-toxin TG domain ABE28_002170 IPR006829 LXG domain ABE28_002185 IPR007383 Protein of unknown function DUF445 ABE28_002190 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 ABE28_002190 IPR038770 Sodium/solute symporter superfamily ABE28_002190 IPR004710 Bile acid:sodium symporter ABE28_002195 IPR011006 CheY-like superfamily ABE28_002195 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_002195 IPR001789 Signal transduction response regulator, receiver domain ABE28_002195 IPR039420 Transcriptional regulatory protein WalR-like ABE28_002195 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002200 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002200 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002200 IPR005467 Histidine kinase domain ABE28_002200 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_002200 IPR003660 HAMP domain ABE28_002200 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_002200 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_002205 IPR003838 ABC transporter permease protein domain ABE28_002210 IPR003439 ABC transporter-like ABE28_002210 IPR003593 AAA+ ATPase domain ABE28_002210 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002215 IPR019264 Domain of unknown function DUF2179 ABE28_002215 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_002215 IPR003740 Uncharacterised membrane protein YitT ABE28_002230 IPR035906 MetI-like superfamily ABE28_002230 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_002235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_002235 IPR035906 MetI-like superfamily ABE28_002240 IPR000843 LacI-type HTH domain ABE28_002240 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_002240 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_002240 IPR028082 Periplasmic binding protein-like I ABE28_002250 IPR004104 Oxidoreductase, C-terminal ABE28_002250 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_002250 IPR000683 Oxidoreductase, N-terminal ABE28_002250 IPR036291 NAD(P)-binding domain superfamily ABE28_002250 IPR008354 Glucose-fructose oxidoreductase, bacterial ABE28_002255 IPR004104 Oxidoreductase, C-terminal ABE28_002255 IPR036291 NAD(P)-binding domain superfamily ABE28_002255 IPR000683 Oxidoreductase, N-terminal ABE28_002265 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ABE28_002265 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ABE28_002265 IPR002942 RNA-binding S4 domain ABE28_002265 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ABE28_002265 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_002265 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_002265 IPR036986 RNA-binding S4 domain superfamily ABE28_002270 IPR020471 Aldo/keto reductase ABE28_002270 IPR023210 NADP-dependent oxidoreductase domain ABE28_002270 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_002285 IPR003593 AAA+ ATPase domain ABE28_002285 IPR003439 ABC transporter-like ABE28_002285 IPR017871 ABC transporter, conserved site ABE28_002285 IPR015861 ABC transporter, ribose import, RbsA ABE28_002285 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002290 IPR001851 ABC transporter, permease ABE28_002305 IPR036034 PDZ superfamily ABE28_002305 IPR001940 Peptidase S1C ABE28_002305 IPR009003 Peptidase S1, PA clan ABE28_002305 IPR001478 PDZ domain ABE28_002315 IPR014250 Quinol oxidase subunit IV ABE28_002315 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes ABE28_002320 IPR033946 Ubiquinol oxidase subunit III domain ABE28_002320 IPR014246 Quinol oxidase subunit III ABE28_002320 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ABE28_002320 IPR035973 Cytochrome c oxidase subunit III-like superfamily ABE28_002320 IPR000298 Cytochrome c oxidase subunit III-like ABE28_002320 IPR024791 Cytochrome c oxidase subunit III ABE28_002325 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site ABE28_002325 IPR023616 Cytochrome c oxidase-like, subunit I domain ABE28_002325 IPR036927 Cytochrome c oxidase-like, subunit I superfamily ABE28_002325 IPR000883 Cytochrome c oxidase subunit I ABE28_002325 IPR014233 Quinol oxidase subunit I ABE28_002330 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain ABE28_002330 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily ABE28_002330 IPR006333 Cytochrome o ubiquinol oxidase subunit II ABE28_002330 IPR006332 Quinol oxidase subunit II ABE28_002330 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain ABE28_002330 IPR008972 Cupredoxin ABE28_002330 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ABE28_002340 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF ABE28_002340 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 ABE28_002345 IPR035804 Aspartokinase 3, N-terminal ABE28_002345 IPR001341 Aspartate kinase ABE28_002345 IPR018042 Aspartate kinase, conserved site ABE28_002345 IPR027795 CASTOR, ACT domain ABE28_002345 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_002345 IPR005260 Aspartate kinase, monofunctional class ABE28_002345 IPR036393 Acetylglutamate kinase-like superfamily ABE28_002345 IPR002912 ACT domain ABE28_002350 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002350 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ABE28_002355 IPR001789 Signal transduction response regulator, receiver domain ABE28_002355 IPR011006 CheY-like superfamily ABE28_002355 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_002355 IPR000792 Transcription regulator LuxR, C-terminal ABE28_002360 IPR017871 ABC transporter, conserved site ABE28_002360 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002360 IPR003439 ABC transporter-like ABE28_002360 IPR003593 AAA+ ATPase domain ABE28_002365 IPR000412 ABC-2 transporter ABE28_002370 IPR000412 ABC-2 transporter ABE28_002375 IPR029479 Nitroreductase ABE28_002375 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ABE28_002375 IPR000415 Nitroreductase-like ABE28_002380 IPR011527 ABC transporter type 1, transmembrane domain ABE28_002380 IPR003593 AAA+ ATPase domain ABE28_002380 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002380 IPR017871 ABC transporter, conserved site ABE28_002380 IPR039421 Type I protein exporter ABE28_002380 IPR003439 ABC transporter-like ABE28_002380 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_002385 IPR003593 AAA+ ATPase domain ABE28_002385 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_002385 IPR003439 ABC transporter-like ABE28_002385 IPR017871 ABC transporter, conserved site ABE28_002385 IPR039421 Type I protein exporter ABE28_002385 IPR011527 ABC transporter type 1, transmembrane domain ABE28_002385 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002390 IPR009057 Homeobox-like domain superfamily ABE28_002390 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal ABE28_002390 IPR001647 DNA-binding HTH domain, TetR-type ABE28_002390 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_002395 IPR005829 Sugar transporter, conserved site ABE28_002395 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_002395 IPR011701 Major facilitator superfamily ABE28_002395 IPR020846 Major facilitator superfamily domain ABE28_002395 IPR004734 Multidrug resistance protein ABE28_002395 IPR036259 MFS transporter superfamily ABE28_002405 IPR025299 CstA, C-terminal domain ABE28_002405 IPR003706 CstA, N-terminal domain ABE28_002415 IPR029020 Ammonium/urea transporter ABE28_002415 IPR001905 Ammonium transporter ABE28_002415 IPR024041 Ammonium transporter AmtB-like domain ABE28_002415 IPR018047 Ammonium transporter, conserved site ABE28_002420 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_002420 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABE28_002420 IPR002187 Nitrogen regulatory protein PII ABE28_002420 IPR017918 Nitrogen regulatory protein PII, conserved site ABE28_002430 IPR011006 CheY-like superfamily ABE28_002430 IPR001789 Signal transduction response regulator, receiver domain ABE28_002430 IPR007492 LytTR DNA-binding domain ABE28_002435 IPR017821 Succinate CoA transferase ABE28_002435 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily ABE28_002435 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ABE28_002435 IPR003702 Acetyl-CoA hydrolase/transferase ABE28_002435 IPR037171 NagB/RpiA transferase-like ABE28_002440 IPR002549 Transmembrane protein TqsA-like ABE28_002445 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ABE28_002445 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_002445 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_002445 IPR015590 Aldehyde dehydrogenase domain ABE28_002445 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_002445 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_002445 IPR010102 Succinate semialdehyde dehydrogenase ABE28_002450 IPR036458 Sodium:dicarboxylate symporter superfamily ABE28_002450 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_002450 IPR023954 C4-dicarboxylate transport protein ABE28_002450 IPR001991 Sodium:dicarboxylate symporter ABE28_002455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_002455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_002455 IPR003710 Ketopantoate reductase ApbA/PanE ABE28_002455 IPR013752 Ketopantoate reductase, C-terminal domain ABE28_002455 IPR013332 Ketopantoate reductase, N-terminal domain ABE28_002455 IPR036291 NAD(P)-binding domain superfamily ABE28_002460 IPR010611 3D domain ABE28_002460 IPR036779 LysM domain superfamily ABE28_002460 IPR036908 RlpA-like domain superfamily ABE28_002460 IPR018392 LysM domain ABE28_002465 IPR011650 Peptidase M20, dimerisation domain ABE28_002465 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_002465 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria ABE28_002465 IPR002933 Peptidase M20 ABE28_002470 IPR019060 Domain of unknown function DUF2382 ABE28_002470 IPR025889 General stress protein 17M-like domain ABE28_002475 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_002475 IPR033479 Double Cache domain 1 ABE28_002475 IPR029151 Periplasmic sensor-like domain superfamily ABE28_002475 IPR003660 HAMP domain ABE28_002475 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_002490 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C ABE28_002490 IPR012338 Beta-lactamase/transpeptidase-like ABE28_002495 IPR006439 HAD hydrolase, subfamily IA ABE28_002495 IPR036412 HAD-like superfamily ABE28_002495 IPR041492 Haloacid dehalogenase-like hydrolase ABE28_002495 IPR023214 HAD superfamily ABE28_002495 IPR023733 Pyrophosphatase PpaX ABE28_002495 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_002505 IPR013783 Immunoglobulin-like fold ABE28_002505 IPR003610 Carbohydrate-binding module family 5/12 ABE28_002505 IPR001579 Glycoside hydrolase, chitinase active site ABE28_002505 IPR001223 Glycoside hydrolase family 18, catalytic domain ABE28_002505 IPR036116 Fibronectin type III superfamily ABE28_002505 IPR003961 Fibronectin type III ABE28_002505 IPR029070 Chitinase insertion domain superfamily ABE28_002505 IPR011583 Chitinase II ABE28_002505 IPR036573 Carbohydrate-binding module superfamily 5/12 ABE28_002505 IPR017853 Glycoside hydrolase superfamily ABE28_002510 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ABE28_002510 IPR007046 RNA polymerase sigma factor 54, core-binding domain ABE28_002510 IPR007634 RNA polymerase sigma factor 54, DNA-binding ABE28_002510 IPR000394 RNA polymerase sigma factor 54 ABE28_002515 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_002515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_002515 IPR005814 Aminotransferase class-III ABE28_002515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_002520 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_002520 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_002520 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_002520 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_002520 IPR015590 Aldehyde dehydrogenase domain ABE28_002530 IPR037920 Probable oxidoreductase YoaE, C-terminal ABE28_002530 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ABE28_002530 IPR006656 Molybdopterin oxidoreductase ABE28_002530 IPR006657 Molybdopterin dinucleotide-binding domain ABE28_002530 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002530 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site ABE28_002535 IPR005467 Histidine kinase domain ABE28_002535 IPR035965 PAS domain superfamily ABE28_002535 IPR013767 PAS fold ABE28_002535 IPR013655 PAS fold-3 ABE28_002535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_002535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_002535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_002535 IPR000014 PAS domain ABE28_002535 IPR001610 PAC motif ABE28_002535 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002540 IPR011545 DEAD/DEAH box helicase domain ABE28_002540 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_002540 IPR001650 Helicase, C-terminal ABE28_002540 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002545 IPR038965 Transposase InsF-like ABE28_002545 IPR025948 HTH-like domain ABE28_002545 IPR001584 Integrase, catalytic core ABE28_002545 IPR036397 Ribonuclease H superfamily ABE28_002545 IPR012337 Ribonuclease H-like superfamily ABE28_002555 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002555 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_002555 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002555 IPR000835 MarR-type HTH domain ABE28_002560 IPR000182 GNAT domain ABE28_002560 IPR039143 Glucosamine 6-phosphate N-acetyltransferase ABE28_002560 IPR016181 Acyl-CoA N-acyltransferase ABE28_002565 IPR038750 Uncharacterized protein YczE/YyaS-like ABE28_002570 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ABE28_002570 IPR006237 L-methionine gamma-lyase ABE28_002570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_002570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_002570 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_002580 IPR001783 Lumazine-binding protein ABE28_002580 IPR017938 Riboflavin synthase-like beta-barrel ABE28_002580 IPR026017 Lumazine-binding domain ABE28_002580 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ABE28_002590 IPR034964 Lumazine synthase ABE28_002590 IPR002180 Lumazine/riboflavin synthase ABE28_002590 IPR036467 Lumazine/riboflavin synthase superfamily ABE28_002595 IPR038763 DHH phosphoesterase superfamily ABE28_002600 IPR017039 Virulence factor BrkB ABE28_002615 IPR019845 Squalene/phytoene synthase, conserved site ABE28_002615 IPR008949 Isoprenoid synthase domain superfamily ABE28_002615 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head ABE28_002620 IPR014105 Carotenoid/retinoid oxidoreductase ABE28_002620 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002620 IPR002937 Amine oxidase ABE28_002635 IPR014105 Carotenoid/retinoid oxidoreductase ABE28_002635 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002635 IPR002937 Amine oxidase ABE28_002640 IPR001173 Glycosyltransferase 2-like ABE28_002640 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_002650 IPR006153 Cation/H+ exchanger ABE28_002650 IPR038770 Sodium/solute symporter superfamily ABE28_002655 IPR026278 Potassium/proton antiporter subunit KhtT ABE28_002655 IPR006037 Regulator of K+ conductance, C-terminal ABE28_002655 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ABE28_002660 IPR002104 Integrase, catalytic domain ABE28_002660 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_002660 IPR013762 Integrase-like, catalytic domain superfamily ABE28_002665 IPR004753 Cell shape determining protein MreB ABE28_002670 IPR007820 AbrB family ABE28_002670 IPR017516 AbrB duplication ABE28_002675 IPR000540 Flagellar motor protein MotA, conserved site ABE28_002675 IPR002898 MotA/TolQ/ExbB proton channel ABE28_002680 IPR025713 Motility protein B, N-terminal domain ABE28_002680 IPR006665 OmpA-like domain ABE28_002680 IPR036737 OmpA-like domain superfamily ABE28_002690 IPR029062 Class I glutamine amidotransferase-like ABE28_002690 IPR006286 Deglycase PfpI ABE28_002690 IPR002818 DJ-1/PfpI ABE28_002695 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ABE28_002695 IPR001714 Peptidase M24, methionine aminopeptidase ABE28_002695 IPR036005 Creatinase/aminopeptidase-like ABE28_002695 IPR000994 Peptidase M24 ABE28_002700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002700 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain ABE28_002705 IPR036135 MoeA, N-terminal and linker domain superfamily ABE28_002705 IPR036425 MoaB/Mog-like domain superfamily ABE28_002705 IPR001453 MoaB/Mog domain ABE28_002705 IPR038987 Molybdopterin biosynthesis protein MoeA-like ABE28_002705 IPR005111 MoeA, C-terminal, domain IV ABE28_002705 IPR036688 MoeA, C-terminal, domain IV superfamily ABE28_002705 IPR005110 MoeA, N-terminal and linker domain ABE28_002710 IPR009507 Protein of unknown function UPF0435 ABE28_002720 IPR017039 Virulence factor BrkB ABE28_002725 IPR001757 P-type ATPase ABE28_002725 IPR023214 HAD superfamily ABE28_002725 IPR036412 HAD-like superfamily ABE28_002725 IPR008250 P-type ATPase, A domain superfamily ABE28_002725 IPR023298 P-type ATPase, transmembrane domain superfamily ABE28_002725 IPR018303 P-type ATPase, phosphorylation site ABE28_002725 IPR023299 P-type ATPase, cytoplasmic domain N ABE28_002725 IPR027256 P-type ATPase, subfamily IB ABE28_002730 IPR011701 Major facilitator superfamily ABE28_002730 IPR020846 Major facilitator superfamily domain ABE28_002730 IPR036259 MFS transporter superfamily ABE28_002735 IPR004713 Calcium/proton exchanger ABE28_002735 IPR004798 Calcium/proton exchanger CAX ABE28_002735 IPR004837 Sodium/calcium exchanger membrane region ABE28_002740 IPR025548 YfkD-like protein ABE28_002745 IPR014866 YfkB-like domain ABE28_002745 IPR013785 Aldolase-type TIM barrel ABE28_002745 IPR007197 Radical SAM ABE28_002745 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB ABE28_002755 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily ABE28_002755 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain ABE28_002755 IPR011167 Iron-dependent fumarate hydratase ABE28_002755 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain ABE28_002770 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_002770 IPR002509 NodB homology domain ABE28_002770 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA ABE28_002775 IPR003265 HhH-GPD domain ABE28_002775 IPR011257 DNA glycosylase ABE28_002780 IPR030390 RNA methyltransferase TrmA, active site ABE28_002780 IPR030391 RNA methyltransferase TrmA, conserved site ABE28_002780 IPR012340 Nucleic acid-binding, OB-fold ABE28_002780 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_002780 IPR002792 TRAM domain ABE28_002780 IPR010280 (Uracil-5)-methyltransferase family ABE28_002785 IPR013785 Aldolase-type TIM barrel ABE28_002785 IPR035587 DUS-like, FMN-binding domain ABE28_002785 IPR001269 tRNA-dihydrouridine synthase ABE28_002785 IPR018517 tRNA-dihydrouridine synthase, conserved site ABE28_002790 IPR009921 Domain of unknown function DUF1456 ABE28_002795 IPR022694 3-hydroxyacyl-CoA dehydrogenase ABE28_002795 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ABE28_002795 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_002795 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_002795 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_002795 IPR036291 NAD(P)-binding domain superfamily ABE28_002795 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_002805 IPR018385 C4-dicarboxylate anaerobic carrier-like ABE28_002810 IPR017439 Amidohydrolase ABE28_002810 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_002810 IPR002933 Peptidase M20 ABE28_002810 IPR011650 Peptidase M20, dimerisation domain ABE28_002815 IPR029151 Periplasmic sensor-like domain superfamily ABE28_002815 IPR033479 Double Cache domain 1 ABE28_002815 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_002815 IPR003660 HAMP domain ABE28_002815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_002825 IPR001320 Ionotropic glutamate receptor ABE28_002825 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_002825 IPR018313 Solute-binding protein family 3, conserved site ABE28_002830 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_002830 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_002830 IPR035906 MetI-like superfamily ABE28_002835 IPR003439 ABC transporter-like ABE28_002835 IPR003593 AAA+ ATPase domain ABE28_002835 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_002835 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002835 IPR017871 ABC transporter, conserved site ABE28_002845 IPR022687 DTXR-type HTH domain ABE28_002845 IPR000600 ROK family ABE28_002845 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002845 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002850 IPR026045 Ferric binding protein ABE28_002855 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ABE28_002855 IPR003439 ABC transporter-like ABE28_002855 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002855 IPR017871 ABC transporter, conserved site ABE28_002855 IPR013611 Transport-associated OB, type 2 ABE28_002855 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ABE28_002855 IPR003593 AAA+ ATPase domain ABE28_002855 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_002860 IPR005667 Sulphate ABC transporter permease protein 2 ABE28_002860 IPR035906 MetI-like superfamily ABE28_002860 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_002860 IPR011865 Sulphate ABC transporter, permease protein CysT ABE28_002865 IPR000362 Fumarate lyase family ABE28_002865 IPR024083 Fumarase/histidase, N-terminal ABE28_002865 IPR009049 Argininosuccinate lyase ABE28_002865 IPR022761 Fumarate lyase, N-terminal ABE28_002865 IPR029419 Argininosuccinate lyase, C-terminal ABE28_002865 IPR008948 L-Aspartase-like ABE28_002870 IPR038377 Sodium/glucose symporter superfamily ABE28_002870 IPR001734 Sodium/solute symporter ABE28_002880 IPR004840 Amino acid permease, conserved site ABE28_002880 IPR004841 Amino acid permease/ SLC12A domain ABE28_002885 IPR004841 Amino acid permease/ SLC12A domain ABE28_002885 IPR004840 Amino acid permease, conserved site ABE28_002890 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABE28_002890 IPR000808 Mrp, conserved site ABE28_002890 IPR019591 Mrp/NBP35 ATP-binding protein ABE28_002890 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002895 IPR003786 Sulfur carrier protein FdhD ABE28_002895 IPR016193 Cytidine deaminase-like ABE28_002900 IPR013785 Aldolase-type TIM barrel ABE28_002900 IPR006638 Elp3/MiaB/NifB ABE28_002900 IPR013483 Molybdenum cofactor biosynthesis protein A ABE28_002900 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site ABE28_002900 IPR010505 Molybdenum cofactor synthesis C-terminal ABE28_002900 IPR007197 Radical SAM ABE28_002905 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain ABE28_002905 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily ABE28_002905 IPR023045 Molybdenum cofactor biosynthesis C ABE28_002910 IPR000594 THIF-type NAD/FAD binding fold ABE28_002910 IPR035985 Ubiquitin-activating enzyme ABE28_002915 IPR036425 MoaB/Mog-like domain superfamily ABE28_002915 IPR001453 MoaB/Mog domain ABE28_002915 IPR038987 Molybdopterin biosynthesis protein MoeA-like ABE28_002915 IPR005111 MoeA, C-terminal, domain IV ABE28_002915 IPR036688 MoeA, C-terminal, domain IV superfamily ABE28_002915 IPR005110 MoeA, N-terminal and linker domain ABE28_002915 IPR036135 MoeA, N-terminal and linker domain superfamily ABE28_002920 IPR003448 Molybdopterin biosynthesis MoaE ABE28_002920 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily ABE28_002925 IPR012675 Beta-grasp domain superfamily ABE28_002925 IPR003749 Sulfur carrier ThiS/MoaD-like ABE28_002925 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_002930 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002930 IPR006478 Formate dehydrogenase, alpha subunit ABE28_002930 IPR006657 Molybdopterin dinucleotide-binding domain ABE28_002930 IPR006656 Molybdopterin oxidoreductase ABE28_002930 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ABE28_002930 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding ABE28_002930 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_002930 IPR041924 Formate dehydrogenase H, N-terminal ABE28_002930 IPR036010 2Fe-2S ferredoxin-like superfamily ABE28_002930 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ABE28_002930 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_002935 IPR012440 Protein of unknown function DUF1641 ABE28_002940 IPR020948 Phosphate-starvation-induced PsiE-like ABE28_002940 IPR009315 Phosphate-starvation-induced PsiE ABE28_002945 IPR018745 Domain of unknown function DUF2294 ABE28_002955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_002955 IPR035906 MetI-like superfamily ABE28_002955 IPR011867 Molybdate ABC transporter, permease protein ABE28_002965 IPR006657 Molybdopterin dinucleotide-binding domain ABE28_002965 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ABE28_002965 IPR036010 2Fe-2S ferredoxin-like superfamily ABE28_002965 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ABE28_002965 IPR006656 Molybdopterin oxidoreductase ABE28_002965 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_002965 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_002965 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002965 IPR041924 Formate dehydrogenase H, N-terminal ABE28_002965 IPR006478 Formate dehydrogenase, alpha subunit ABE28_002965 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding ABE28_002980 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002980 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002980 IPR000847 Transcription regulator HTH, LysR ABE28_002980 IPR005119 LysR, substrate-binding ABE28_002985 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_002985 IPR036661 Luciferase-like domain superfamily ABE28_002985 IPR011251 Luciferase-like domain ABE28_002990 IPR036661 Luciferase-like domain superfamily ABE28_002990 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A ABE28_002990 IPR011251 Luciferase-like domain ABE28_002995 IPR036249 Thioredoxin-like superfamily ABE28_002995 IPR002109 Glutaredoxin ABE28_003005 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003010 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_003010 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_003010 IPR035906 MetI-like superfamily ABE28_003015 IPR035906 MetI-like superfamily ABE28_003015 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_003015 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_003020 IPR017871 ABC transporter, conserved site ABE28_003020 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003020 IPR003593 AAA+ ATPase domain ABE28_003020 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_003020 IPR003439 ABC transporter-like ABE28_003030 IPR011650 Peptidase M20, dimerisation domain ABE28_003030 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_003030 IPR002933 Peptidase M20 ABE28_003030 IPR017439 Amidohydrolase ABE28_003035 IPR036291 NAD(P)-binding domain superfamily ABE28_003035 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_003035 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003040 IPR010651 Sugar transport protein ABE28_003050 IPR011701 Major facilitator superfamily ABE28_003050 IPR005267 Glycerol-3-phosphate transporter ABE28_003050 IPR021159 Glycerate/sugar phosphate transporter, conserved site ABE28_003050 IPR036259 MFS transporter superfamily ABE28_003050 IPR020846 Major facilitator superfamily domain ABE28_003050 IPR000849 Sugar phosphate transporter ABE28_003055 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_003055 IPR004839 Aminotransferase, class I/classII ABE28_003055 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_003055 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type ABE28_003055 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_003055 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ABE28_003060 IPR001509 NAD-dependent epimerase/dehydratase ABE28_003060 IPR036291 NAD(P)-binding domain superfamily ABE28_003065 IPR004841 Amino acid permease/ SLC12A domain ABE28_003065 IPR004840 Amino acid permease, conserved site ABE28_003075 IPR006118 Recombinase, conserved site ABE28_003075 IPR006120 Resolvase, HTH domain ABE28_003075 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily ABE28_003075 IPR006119 Resolvase, N-terminal catalytic domain ABE28_003115 IPR022712 Beta-Casp domain ABE28_003115 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABE28_003115 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_003115 IPR001279 Metallo-beta-lactamase ABE28_003125 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003125 IPR003593 AAA+ ATPase domain ABE28_003125 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ABE28_003125 IPR007692 DNA helicase, DnaB type ABE28_003125 IPR007694 DNA helicase, DnaB-like, C-terminal ABE28_003125 IPR007693 DNA helicase, DnaB-like, N-terminal ABE28_003125 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_003195 IPR029045 ClpP/crotonase-like domain superfamily ABE28_003195 IPR001907 ATP-dependent Clp protease proteolytic subunit ABE28_003195 IPR033135 ClpP, histidine active site ABE28_003195 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_003235 IPR008258 Transglycosylase SLT domain 1 ABE28_003235 IPR023346 Lysozyme-like domain superfamily ABE28_003330 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_003330 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003330 IPR036291 NAD(P)-binding domain superfamily ABE28_003350 IPR003593 AAA+ ATPase domain ABE28_003350 IPR003439 ABC transporter-like ABE28_003350 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003355 IPR027022 ABC transporter permease protein, BceB-type ABE28_003365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_003365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_003365 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_003365 IPR005467 Histidine kinase domain ABE28_003365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_003370 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_003370 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_003370 IPR001789 Signal transduction response regulator, receiver domain ABE28_003370 IPR011006 CheY-like superfamily ABE28_003370 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003370 IPR039420 Transcriptional regulatory protein WalR-like ABE28_003375 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003375 IPR017871 ABC transporter, conserved site ABE28_003375 IPR003439 ABC transporter-like ABE28_003375 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_003375 IPR003593 AAA+ ATPase domain ABE28_003380 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_003380 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_003380 IPR035906 MetI-like superfamily ABE28_003385 IPR018313 Solute-binding protein family 3, conserved site ABE28_003385 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003395 IPR025453 Protein of unknown function DUF4309 ABE28_003405 IPR013549 Domain of unknown function DUF1731 ABE28_003405 IPR010099 Epimerase family protein SDR39U1 ABE28_003405 IPR036291 NAD(P)-binding domain superfamily ABE28_003405 IPR001509 NAD-dependent epimerase/dehydratase ABE28_003410 IPR006042 Xanthine/uracil permease ABE28_003410 IPR006043 Xanthine/uracil/vitamin C permease ABE28_003410 IPR017588 Uric acid permease UacT-like ABE28_003415 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_003415 IPR041522 CdaR, GGDEF-like domain ABE28_003415 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_003415 IPR012914 Purine catabolism PurC-like domain ABE28_003420 IPR041522 CdaR, GGDEF-like domain ABE28_003420 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_003420 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_003425 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase ABE28_003425 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 ABE28_003425 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily ABE28_003425 IPR002042 Uricase ABE28_003425 IPR019842 Uricase, conserved site ABE28_003430 IPR019842 Uricase, conserved site ABE28_003430 IPR002042 Uricase ABE28_003430 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase ABE28_003430 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 ABE28_003430 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily ABE28_003435 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily ABE28_003435 IPR014306 Hydroxyisourate hydrolase ABE28_003435 IPR023418 Transthyretin, thyroxine binding site ABE28_003435 IPR023416 Transthyretin/hydroxyisourate hydrolase domain ABE28_003435 IPR023419 Transthyretin, conserved site ABE28_003440 IPR013740 Redoxin ABE28_003440 IPR036249 Thioredoxin-like superfamily ABE28_003440 IPR013766 Thioredoxin domain ABE28_003440 IPR002065 Thiol peroxidase Tpx ABE28_003440 IPR018219 Thiol peroxidase conserved site ABE28_003445 IPR023561 Carbonic anhydrase, alpha-class ABE28_003445 IPR036398 Alpha carbonic anhydrase domain superfamily ABE28_003445 IPR001148 Alpha carbonic anhydrase domain ABE28_003445 IPR041891 Carbonic anhydrase, prokaryotic-like ABE28_003445 IPR018338 Carbonic anhydrase, alpha-class, conserved site ABE28_003460 IPR018392 LysM domain ABE28_003460 IPR036779 LysM domain superfamily ABE28_003460 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_003460 IPR038765 Papain-like cysteine peptidase superfamily ABE28_003475 IPR005149 Transcription regulator PadR, N-terminal ABE28_003475 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003475 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003490 IPR038770 Sodium/solute symporter superfamily ABE28_003490 IPR004710 Bile acid:sodium symporter ABE28_003490 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 ABE28_003495 IPR036259 MFS transporter superfamily ABE28_003495 IPR020846 Major facilitator superfamily domain ABE28_003495 IPR011701 Major facilitator superfamily ABE28_003520 IPR010093 SinI-like, DNA-binding domain ABE28_003520 IPR041657 Helix-turn-helix domain, group 17 ABE28_003525 IPR002549 Transmembrane protein TqsA-like ABE28_003530 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003530 IPR018313 Solute-binding protein family 3, conserved site ABE28_003530 IPR001320 Ionotropic glutamate receptor ABE28_003535 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_003535 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_003535 IPR035906 MetI-like superfamily ABE28_003540 IPR017871 ABC transporter, conserved site ABE28_003540 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003540 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_003540 IPR003593 AAA+ ATPase domain ABE28_003540 IPR003439 ABC transporter-like ABE28_003550 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003550 IPR000847 Transcription regulator HTH, LysR ABE28_003550 IPR005119 LysR, substrate-binding ABE28_003550 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003560 IPR011789 Cu(I)-responsive transcriptional regulator ABE28_003560 IPR009061 Putative DNA-binding domain superfamily ABE28_003560 IPR000551 MerR-type HTH domain ABE28_003560 IPR015358 Transcription regulator MerR, DNA binding ABE28_003565 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 IPR036291 NAD(P)-binding domain superfamily ABE28_003565 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_003570 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_003570 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_003570 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_003570 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_003570 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_003570 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_003570 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_003575 IPR002155 Thiolase ABE28_003575 IPR012805 Acetyl-CoA C-acyltransferase FadA ABE28_003575 IPR020610 Thiolase, active site ABE28_003575 IPR020613 Thiolase, conserved site ABE28_003575 IPR016039 Thiolase-like ABE28_003575 IPR020615 Thiolase, acyl-enzyme intermediate active site ABE28_003575 IPR020617 Thiolase, C-terminal ABE28_003575 IPR020616 Thiolase, N-terminal ABE28_003580 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_003580 IPR042099 AMP-dependent synthetase-like superfamily ABE28_003580 IPR020845 AMP-binding, conserved site ABE28_003580 IPR000873 AMP-dependent synthetase/ligase ABE28_003585 IPR025435 YfhD-like protein ABE28_003595 IPR013549 Domain of unknown function DUF1731 ABE28_003595 IPR010099 Epimerase family protein SDR39U1 ABE28_003595 IPR001509 NAD-dependent epimerase/dehydratase ABE28_003595 IPR036291 NAD(P)-binding domain superfamily ABE28_003600 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003600 IPR003783 Regulatory protein RecX ABE28_003605 IPR014938 Protein of unknown function DUF1811 ABE28_003605 IPR036289 Hypothetical protein YfhH ABE28_003615 IPR026952 WVELL protein ABE28_003620 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ABE28_003625 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_003625 IPR029119 MutY, C-terminal ABE28_003625 IPR011257 DNA glycosylase ABE28_003625 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ABE28_003625 IPR003265 HhH-GPD domain ABE28_003625 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ABE28_003625 IPR005760 A/G-specific adenine glycosylase MutY ABE28_003640 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 IPR036291 NAD(P)-binding domain superfamily ABE28_003650 IPR025572 YgaB-like protein ABE28_003655 IPR035930 FomD-like superfamily ABE28_003655 IPR007295 Domain of unknown function DUF402 ABE28_003655 IPR016882 Uncharacterised protein family UPF0374 ABE28_003660 IPR039421 Type I protein exporter ABE28_003660 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003660 IPR003593 AAA+ ATPase domain ABE28_003660 IPR017871 ABC transporter, conserved site ABE28_003660 IPR011527 ABC transporter type 1, transmembrane domain ABE28_003660 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_003660 IPR003439 ABC transporter-like ABE28_003665 IPR000620 EamA domain ABE28_003675 IPR029039 Flavoprotein-like superfamily ABE28_003675 IPR005025 NADPH-dependent FMN reductase-like ABE28_003675 IPR008254 Flavodoxin/nitric oxide synthase ABE28_003680 IPR020846 Major facilitator superfamily domain ABE28_003680 IPR036259 MFS transporter superfamily ABE28_003680 IPR011701 Major facilitator superfamily ABE28_003680 IPR004638 Drug resistance transporter EmrB-like ABE28_003685 IPR011053 Single hybrid motif ABE28_003690 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003690 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003690 IPR000835 MarR-type HTH domain ABE28_003695 IPR010343 Aromatic acid exporter family member 1 ABE28_003700 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_003700 IPR002932 Glutamate synthase domain ABE28_003700 IPR006982 Glutamate synthase, central-N ABE28_003700 IPR017932 Glutamine amidotransferase type 2 domain ABE28_003700 IPR002489 Glutamate synthase, alpha subunit, C-terminal ABE28_003700 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily ABE28_003700 IPR013785 Aldolase-type TIM barrel ABE28_003705 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase ABE28_003705 IPR005814 Aminotransferase class-III ABE28_003705 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_003705 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_003705 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_003735 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_003735 IPR013762 Integrase-like, catalytic domain superfamily ABE28_003735 IPR002104 Integrase, catalytic domain ABE28_003745 IPR033135 ClpP, histidine active site ABE28_003745 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_003745 IPR029045 ClpP/crotonase-like domain superfamily ABE28_003745 IPR001907 ATP-dependent Clp protease proteolytic subunit ABE28_003750 IPR003819 TauD/TfdA-like domain ABE28_003750 IPR042098 Taurine dioxygenase TauD-like superfamily ABE28_003755 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003755 IPR010067 Aliphatic sulfonates-binding protein ABE28_003755 IPR015168 SsuA/THI5-like ABE28_003760 IPR017871 ABC transporter, conserved site ABE28_003760 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003760 IPR003439 ABC transporter-like ABE28_003760 IPR003593 AAA+ ATPase domain ABE28_003760 IPR017875 Aliphatic sulfonates import ATP-binding protein SsuB ABE28_003765 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_003765 IPR035906 MetI-like superfamily ABE28_003770 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003770 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_003770 IPR005467 Histidine kinase domain ABE28_003770 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_003770 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_003770 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_003775 IPR030395 Glycerophosphodiester phosphodiesterase domain ABE28_003775 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ABE28_003780 IPR036291 NAD(P)-binding domain superfamily ABE28_003780 IPR011032 GroES-like superfamily ABE28_003780 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_003780 IPR027399 Alcohol dehydrogenase GroES-associated ABE28_003780 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_003780 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_003810 IPR037509 Phosphomethylpyrimidine synthase ABE28_003810 IPR025747 ThiC-associated domain ABE28_003810 IPR038521 ThiC/Bza superfamily ABE28_003810 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B ABE28_003820 IPR029032 AhpD-like ABE28_003820 IPR003779 Carboxymuconolactone decarboxylase-like ABE28_003835 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_003835 IPR036291 NAD(P)-binding domain superfamily ABE28_003835 IPR011032 GroES-like superfamily ABE28_003835 IPR020843 Polyketide synthase, enoylreductase domain ABE28_003835 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_003835 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_003855 IPR011438 Domain of unknown function DUF1541 ABE28_003870 IPR014267 Glycosyltransferase Gtf1 ABE28_003870 IPR001296 Glycosyl transferase, family 1 ABE28_003900 IPR036259 MFS transporter superfamily ABE28_003900 IPR001927 Sodium:galactoside symporter ABE28_003900 IPR018043 Sodium:galactoside symporter, conserved site ABE28_003900 IPR039672 Lactose permease-like ABE28_003905 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003905 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003905 IPR000600 ROK family ABE28_003910 IPR003766 Uronate isomerase ABE28_003910 IPR032466 Metal-dependent hydrolase ABE28_003915 IPR008979 Galactose-binding-like domain superfamily ABE28_003915 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ABE28_003915 IPR006101 Glycoside hydrolase, family 2 ABE28_003915 IPR006103 Glycoside hydrolase family 2, catalytic domain ABE28_003915 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich ABE28_003915 IPR006104 Glycosyl hydrolases family 2, sugar binding domain ABE28_003915 IPR017853 Glycoside hydrolase superfamily ABE28_003915 IPR013783 Immunoglobulin-like fold ABE28_003915 IPR023230 Glycoside hydrolase, family 2, conserved site ABE28_003915 IPR023232 Glycoside hydrolase, family 2, active site ABE28_003920 IPR037923 Transcription regulator HTH-like ABE28_003920 IPR018060 DNA binding HTH domain, AraC-type ABE28_003920 IPR020449 Transcription regulator HTH, AraC- type ABE28_003920 IPR003313 AraC-type arabinose-binding/dimerisation domain ABE28_003920 IPR018062 HTH domain AraC-type, conserved site ABE28_003920 IPR009057 Homeobox-like domain superfamily ABE28_003930 IPR000683 Oxidoreductase, N-terminal ABE28_003930 IPR036291 NAD(P)-binding domain superfamily ABE28_003930 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase ABE28_003930 IPR004104 Oxidoreductase, C-terminal ABE28_003935 IPR036291 NAD(P)-binding domain superfamily ABE28_003935 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase ABE28_003935 IPR004104 Oxidoreductase, C-terminal ABE28_003935 IPR000683 Oxidoreductase, N-terminal ABE28_003945 IPR036291 NAD(P)-binding domain superfamily ABE28_003945 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_003950 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_003965 IPR004761 Spore germination GerAB ABE28_003970 IPR003474 Gluconate transporter ABE28_003985 IPR011008 Dimeric alpha-beta barrel ABE28_003985 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_003990 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_003990 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_003990 IPR003593 AAA+ ATPase domain ABE28_003990 IPR002197 DNA binding HTH domain, Fis-type ABE28_003990 IPR029016 GAF-like domain superfamily ABE28_003990 IPR009057 Homeobox-like domain superfamily ABE28_003990 IPR035965 PAS domain superfamily ABE28_003990 IPR025944 Sigma-54 interaction domain, conserved site ABE28_003990 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003990 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_003990 IPR000014 PAS domain ABE28_003995 IPR020855 Ureohydrolase, manganese-binding site ABE28_003995 IPR006035 Ureohydrolase ABE28_003995 IPR023696 Ureohydrolase domain superfamily ABE28_003995 IPR005925 Agmatinase-related ABE28_004005 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_004005 IPR001647 DNA-binding HTH domain, TetR-type ABE28_004005 IPR009057 Homeobox-like domain superfamily ABE28_004010 IPR011701 Major facilitator superfamily ABE28_004010 IPR004638 Drug resistance transporter EmrB-like ABE28_004010 IPR036259 MFS transporter superfamily ABE28_004010 IPR020846 Major facilitator superfamily domain ABE28_004020 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ABE28_004020 IPR013785 Aldolase-type TIM barrel ABE28_004055 IPR001915 Peptidase M48 ABE28_004055 IPR022919 Peptidase M48, protease HtpX, putative ABE28_004060 IPR032808 DoxX family ABE28_004075 IPR006231 Malate:quinone-oxidoreductase ABE28_004075 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_004085 IPR023722 Enterobactin exporter, EntS ABE28_004085 IPR020846 Major facilitator superfamily domain ABE28_004085 IPR036259 MFS transporter superfamily ABE28_004085 IPR010290 Transmembrane secretion effector ABE28_004095 IPR002491 ABC transporter periplasmic binding domain ABE28_004105 IPR026030 Purine-cytosine permease Fcy2/21/22 ABE28_004105 IPR038271 Purine-cytosine permease superfamily ABE28_004105 IPR001248 Purine-cytosine permease ABE28_004110 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004110 IPR011711 GntR, C-terminal ABE28_004110 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004110 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004110 IPR000485 AsnC-type HTH domain ABE28_004110 IPR000524 Transcription regulator HTH, GntR ABE28_004115 IPR011251 Luciferase-like domain ABE28_004115 IPR036661 Luciferase-like domain superfamily ABE28_004125 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004125 IPR029058 Alpha/Beta hydrolase fold ABE28_004130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_004130 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_004130 IPR015590 Aldehyde dehydrogenase domain ABE28_004130 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_004130 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_004130 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_004135 IPR029039 Flavoprotein-like superfamily ABE28_004135 IPR005025 NADPH-dependent FMN reductase-like ABE28_004140 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic ABE28_004140 IPR023465 Riboflavin kinase domain superfamily ABE28_004140 IPR023468 Riboflavin kinase ABE28_004145 IPR015590 Aldehyde dehydrogenase domain ABE28_004145 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_004145 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_004145 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_004145 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_004155 IPR009081 Phosphopantetheine binding ACP domain ABE28_004155 IPR036736 ACP-like superfamily ABE28_004155 IPR036380 Isochorismatase-like superfamily ABE28_004155 IPR000868 Isochorismatase-like ABE28_004155 IPR016291 Isochorismatase ABE28_004160 IPR026030 Purine-cytosine permease Fcy2/21/22 ABE28_004160 IPR001248 Purine-cytosine permease ABE28_004160 IPR038271 Purine-cytosine permease superfamily ABE28_004165 IPR005119 LysR, substrate-binding ABE28_004165 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004165 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004165 IPR000847 Transcription regulator HTH, LysR ABE28_004170 IPR017516 AbrB duplication ABE28_004170 IPR007820 AbrB family ABE28_004175 IPR009665 Protein of unknown function DUF1256 ABE28_004175 IPR023430 Peptidase HybD-like domain superfamily ABE28_004180 IPR004680 Citrate transporter-like domain ABE28_004180 IPR014738 Citrate transporter ABE28_004185 IPR000847 Transcription regulator HTH, LysR ABE28_004185 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004185 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004185 IPR005119 LysR, substrate-binding ABE28_004190 IPR007400 PrpF protein ABE28_004195 IPR029061 Thiamin diphosphate-binding fold ABE28_004195 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_004195 IPR012000 Thiamine pyrophosphate enzyme, central domain ABE28_004195 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_004195 IPR000399 TPP-binding enzyme, conserved site ABE28_004195 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_004200 IPR004741 Oxalate/formate antiporter family transporter ABE28_004200 IPR036259 MFS transporter superfamily ABE28_004200 IPR020846 Major facilitator superfamily domain ABE28_004200 IPR011701 Major facilitator superfamily ABE28_004230 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ABE28_004230 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ABE28_004230 IPR017871 ABC transporter, conserved site ABE28_004230 IPR026253 Methionine import ATP-binding protein MetN ABE28_004230 IPR003439 ABC transporter-like ABE28_004230 IPR018449 NIL domain ABE28_004230 IPR003593 AAA+ ATPase domain ABE28_004230 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004235 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABE28_004235 IPR035906 MetI-like superfamily ABE28_004235 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_004240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_004240 IPR035906 MetI-like superfamily ABE28_004245 IPR039424 Solute-binding protein family 5 ABE28_004245 IPR000914 Solute-binding protein family 5 domain ABE28_004245 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_004255 IPR029056 Ribokinase-like ABE28_004255 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_004255 IPR011611 Carbohydrate kinase PfkB ABE28_004265 IPR029056 Ribokinase-like ABE28_004265 IPR011611 Carbohydrate kinase PfkB ABE28_004265 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_004270 IPR007342 Pseudouridine-5'-phosphate glycosidase ABE28_004270 IPR022830 Indigoidine synthase A-like ABE28_004275 IPR002668 Concentrative nucleoside transporter N-terminal domain ABE28_004275 IPR011657 Concentrative nucleoside transporter C-terminal domain ABE28_004275 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ABE28_004275 IPR008276 Concentrative nucleoside transporter ABE28_004280 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site ABE28_004280 IPR023186 Inosine/uridine-preferring nucleoside hydrolase ABE28_004280 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA ABE28_004280 IPR036452 Ribonucleoside hydrolase-like ABE28_004280 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_004285 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_004295 IPR038501 Spore germination GerAC superfamily ABE28_004295 IPR008844 Spore germination GerAC ABE28_004310 IPR018170 Aldo/keto reductase, conserved site ABE28_004310 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004310 IPR020471 Aldo/keto reductase ABE28_004310 IPR023210 NADP-dependent oxidoreductase domain ABE28_004315 IPR009057 Homeobox-like domain superfamily ABE28_004315 IPR001647 DNA-binding HTH domain, TetR-type ABE28_004315 IPR041646 IcaR, C-terminal ABE28_004320 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily ABE28_004320 IPR000895 Transthyretin/hydroxyisourate hydrolase ABE28_004320 IPR023416 Transthyretin/hydroxyisourate hydrolase domain ABE28_004320 IPR014306 Hydroxyisourate hydrolase ABE28_004320 IPR023419 Transthyretin, conserved site ABE28_004320 IPR023418 Transthyretin, thyroxine binding site ABE28_004325 IPR001789 Signal transduction response regulator, receiver domain ABE28_004325 IPR039420 Transcriptional regulatory protein WalR-like ABE28_004325 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_004325 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004325 IPR011006 CheY-like superfamily ABE28_004330 IPR031967 PhoR, single Cache-like domain ABE28_004330 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_004330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004330 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_004330 IPR000014 PAS domain ABE28_004330 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_004330 IPR035965 PAS domain superfamily ABE28_004330 IPR013767 PAS fold ABE28_004330 IPR005467 Histidine kinase domain ABE28_004330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_004335 IPR031374 Uncharacterised protein family UPF0715 ABE28_004350 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_004350 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_004350 IPR016193 Cytidine deaminase-like ABE28_004355 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_004355 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_004370 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_004375 IPR004761 Spore germination GerAB ABE28_004385 IPR001360 Glycoside hydrolase family 1 ABE28_004385 IPR018120 Glycoside hydrolase family 1, active site ABE28_004385 IPR017853 Glycoside hydrolase superfamily ABE28_004385 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_004390 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_004390 IPR011055 Duplicated hybrid motif ABE28_004390 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_004390 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_004390 IPR003352 Phosphotransferase system, EIIC ABE28_004390 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component ABE28_004390 IPR036878 Glucose permease domain IIB ABE28_004390 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_004395 IPR004341 CAT RNA-binding domain ABE28_004395 IPR001550 Transcription antiterminator, conserved site ABE28_004395 IPR036634 PRD domain superfamily ABE28_004395 IPR036650 CAT RNA-binding domain superfamily ABE28_004395 IPR011608 PRD domain ABE28_004410 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_004410 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_004410 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_004410 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004410 IPR003593 AAA+ ATPase domain ABE28_004420 IPR001248 Purine-cytosine permease ABE28_004420 IPR038271 Purine-cytosine permease superfamily ABE28_004435 IPR017938 Riboflavin synthase-like beta-barrel ABE28_004435 IPR001433 Oxidoreductase FAD/NAD(P)-binding ABE28_004435 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_004435 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ABE28_004435 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site ABE28_004435 IPR012675 Beta-grasp domain superfamily ABE28_004435 IPR039003 Carnitine monooxygenase reductase subunit ABE28_004435 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ABE28_004435 IPR017927 FAD-binding domain, ferredoxin reductase-type ABE28_004435 IPR036010 2Fe-2S ferredoxin-like superfamily ABE28_004435 IPR000951 Phthalate dioxygenase reductase ABE28_004445 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain ABE28_004445 IPR004154 Anticodon-binding ABE28_004445 IPR033656 Histidyl-anticodon-binding ABE28_004445 IPR036621 Anticodon-binding domain superfamily ABE28_004445 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_004445 IPR015807 Histidine-tRNA ligase ABE28_004445 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit ABE28_004450 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_004450 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_004450 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_004450 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_004450 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_004450 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_004450 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_004455 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_004455 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_004455 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ABE28_004455 IPR015815 3-hydroxyisobutyrate dehydrogenase-related ABE28_004455 IPR036291 NAD(P)-binding domain superfamily ABE28_004455 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain ABE28_004455 IPR006398 2-hydroxy-3-oxopropionate reductase ABE28_004455 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site ABE28_004460 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_004460 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_004460 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria ABE28_004460 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_004460 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_004460 IPR010061 Methylmalonate-semialdehyde dehydrogenase ABE28_004460 IPR015590 Aldehyde dehydrogenase domain ABE28_004465 IPR029045 ClpP/crotonase-like domain superfamily ABE28_004465 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_004465 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_004470 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_004470 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_004470 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_004470 IPR029045 ClpP/crotonase-like domain superfamily ABE28_004475 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_004475 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_004475 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_004485 IPR003646 SH3-like domain, bacterial-type ABE28_004485 IPR038765 Papain-like cysteine peptidase superfamily ABE28_004485 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_004485 IPR036779 LysM domain superfamily ABE28_004485 IPR018392 LysM domain ABE28_004490 IPR004761 Spore germination GerAB ABE28_004500 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_004510 IPR015402 Protein of unknown function DUF1980 ABE28_004515 IPR005524 Predicted permease DUF318 ABE28_004530 IPR041694 Oxidoreductase, N-terminal domain ABE28_004530 IPR011032 GroES-like superfamily ABE28_004530 IPR036291 NAD(P)-binding domain superfamily ABE28_004530 IPR020843 Polyketide synthase, enoylreductase domain ABE28_004530 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_004550 IPR004155 PBS lyase HEAT-like repeat ABE28_004550 IPR004453 Epoxyqueuosine reductase QueG ABE28_004550 IPR013542 Domain of unknown function DUF1730 ABE28_004550 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_004550 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_004550 IPR011989 Armadillo-like helical ABE28_004550 IPR016024 Armadillo-type fold ABE28_004555 IPR024301 Putative amidase domain ABE28_004560 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_004560 IPR029028 Alpha/beta knot methyltransferases ABE28_004560 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase ABE28_004560 IPR001537 tRNA/rRNA methyltransferase, SpoU type ABE28_004565 IPR000415 Nitroreductase-like ABE28_004565 IPR029479 Nitroreductase ABE28_004565 IPR016446 Flavin oxidoreductase Frp family ABE28_004570 IPR017871 ABC transporter, conserved site ABE28_004570 IPR003593 AAA+ ATPase domain ABE28_004570 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004570 IPR003439 ABC transporter-like ABE28_004575 IPR002491 ABC transporter periplasmic binding domain ABE28_004580 IPR037294 ABC transporter, BtuC-like ABE28_004580 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_004585 IPR037294 ABC transporter, BtuC-like ABE28_004585 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_004590 IPR010650 PrkA C-terminal domain ABE28_004590 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004590 IPR013153 PrkA AAA domain ABE28_004590 IPR016230 Serine-protein kinase, PrkA ABE28_004605 IPR006698 Uncharacterised protein family UPF0229 ABE28_004605 IPR014230 Sporulation protein YhbH ABE28_004625 IPR004629 Glycosyl transferase WecB/TagA/CpsF ABE28_004625 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase ABE28_004630 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ABE28_004630 IPR003362 Bacterial sugar transferase ABE28_004640 IPR032807 Tyrosine kinase, G-rich domain ABE28_004640 IPR003856 Polysaccharide chain length determinant N-terminal domain ABE28_004645 IPR025669 AAA domain ABE28_004645 IPR005702 Exopolysaccharide synthesis protein ABE28_004645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004655 IPR001296 Glycosyl transferase, family 1 ABE28_004670 IPR016195 Polymerase/histidinol phosphatase-like ABE28_004670 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC ABE28_004685 IPR011701 Major facilitator superfamily ABE28_004685 IPR004747 Cyanate transport system protein ABE28_004685 IPR036259 MFS transporter superfamily ABE28_004685 IPR020846 Major facilitator superfamily domain ABE28_004690 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004690 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004690 IPR011711 GntR, C-terminal ABE28_004690 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004690 IPR000524 Transcription regulator HTH, GntR ABE28_004705 IPR002293 Amino acid/polyamine transporter I ABE28_004710 IPR010651 Sugar transport protein ABE28_004715 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_004715 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 IPR036291 NAD(P)-binding domain superfamily ABE28_004725 IPR005025 NADPH-dependent FMN reductase-like ABE28_004725 IPR007329 FMN-binding ABE28_004725 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_004725 IPR029039 Flavoprotein-like superfamily ABE28_004725 IPR010960 Flavocytochrome c ABE28_004725 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ABE28_004725 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ABE28_004730 IPR000223 Peptidase S26A, signal peptidase I ABE28_004730 IPR019533 Peptidase S26 ABE28_004730 IPR019756 Peptidase S26A, signal peptidase I, serine active site ABE28_004730 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ABE28_004730 IPR019758 Peptidase S26A, signal peptidase I, conserved site ABE28_004730 IPR036286 LexA/Signal peptidase-like superfamily ABE28_004735 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_004735 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_004735 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_004735 IPR003593 AAA+ ATPase domain ABE28_004735 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004740 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme ABE28_004740 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_004740 IPR012000 Thiamine pyrophosphate enzyme, central domain ABE28_004740 IPR029061 Thiamin diphosphate-binding fold ABE28_004740 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_004740 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_004755 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA ABE28_004755 IPR002509 NodB homology domain ABE28_004755 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_004760 IPR032816 SNARE associated Golgi protein ABE28_004765 IPR009695 Diacylglycerol glucosyltransferase, N-terminal ABE28_004770 IPR036995 Methylpurine-DNA glycosylase superfamily ABE28_004770 IPR003180 Methylpurine-DNA glycosylase ABE28_004770 IPR011034 Formyl transferase-like, C-terminal domain superfamily ABE28_004775 IPR036259 MFS transporter superfamily ABE28_004775 IPR005829 Sugar transporter, conserved site ABE28_004775 IPR011701 Major facilitator superfamily ABE28_004775 IPR004638 Drug resistance transporter EmrB-like ABE28_004775 IPR020846 Major facilitator superfamily domain ABE28_004780 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_004780 IPR000304 Pyrroline-5-carboxylate reductase ABE28_004780 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_004780 IPR036291 NAD(P)-binding domain superfamily ABE28_004780 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain ABE28_004785 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_004785 IPR016164 FAD-linked oxidase-like, C-terminal ABE28_004785 IPR004113 FAD-linked oxidase, C-terminal ABE28_004785 IPR004490 Glycolate oxidase subunit GlcD ABE28_004785 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_004785 IPR006094 FAD linked oxidase, N-terminal ABE28_004785 IPR016166 FAD-binding domain, PCMH-type ABE28_004790 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABE28_004790 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ABE28_004790 IPR036291 NAD(P)-binding domain superfamily ABE28_004790 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 ABE28_004790 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 ABE28_004790 IPR008141 Alanine dehydrogenase ABE28_004795 IPR024787 EcsC protein ABE28_004800 IPR029016 GAF-like domain superfamily ABE28_004800 IPR041522 CdaR, GGDEF-like domain ABE28_004800 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_004800 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal ABE28_004800 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_004805 IPR001204 Phosphate transporter ABE28_004810 IPR018445 Putative phosphate transport regulator ABE28_004810 IPR038078 PhoU-like domain superfamily ABE28_004815 IPR001204 Phosphate transporter ABE28_004820 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004820 IPR020471 Aldo/keto reductase ABE28_004820 IPR023210 NADP-dependent oxidoreductase domain ABE28_004820 IPR018170 Aldo/keto reductase, conserved site ABE28_004825 IPR007341 Transglycosylase-associated protein ABE28_004830 IPR016166 FAD-binding domain, PCMH-type ABE28_004830 IPR016167 FAD-binding, type PCMH, subdomain 1 ABE28_004830 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_004830 IPR012951 Berberine/berberine-like ABE28_004830 IPR006094 FAD linked oxidase, N-terminal ABE28_004835 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_004835 IPR002942 RNA-binding S4 domain ABE28_004835 IPR036986 RNA-binding S4 domain superfamily ABE28_004835 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_004835 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ABE28_004835 IPR006225 Pseudouridine synthase, RluC/RluD ABE28_004840 IPR020355 Uncharacterised protein family YhcU ABE28_004845 IPR005746 Thioredoxin ABE28_004845 IPR036249 Thioredoxin-like superfamily ABE28_004845 IPR017937 Thioredoxin, conserved site ABE28_004845 IPR013766 Thioredoxin domain ABE28_004850 IPR016181 Acyl-CoA N-acyltransferase ABE28_004850 IPR003010 Carbon-nitrogen hydrolase ABE28_004850 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_004850 IPR000182 GNAT domain ABE28_004850 IPR001110 Uncharacterised protein family UPF0012, conserved site ABE28_004855 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ABE28_004855 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ABE28_004855 IPR016066 Alpha-D-phosphohexomutase, conserved site ABE28_004855 IPR005841 Alpha-D-phosphohexomutase superfamily ABE28_004855 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ABE28_004855 IPR005843 Alpha-D-phosphohexomutase, C-terminal ABE28_004855 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ABE28_004855 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ABE28_004860 IPR029039 Flavoprotein-like superfamily ABE28_004860 IPR005025 NADPH-dependent FMN reductase-like ABE28_004865 IPR025431 YhdB-like protein ABE28_004870 IPR034274 ENP1, carboxypeptidase domain ABE28_004870 IPR036779 LysM domain superfamily ABE28_004870 IPR000834 Peptidase M14, carboxypeptidase A ABE28_004870 IPR018392 LysM domain ABE28_004880 IPR007197 Radical SAM ABE28_004880 IPR013785 Aldolase-type TIM barrel ABE28_004880 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site ABE28_004880 IPR010505 Molybdenum cofactor synthesis C-terminal ABE28_004880 IPR006638 Elp3/MiaB/NifB ABE28_004880 IPR013483 Molybdenum cofactor biosynthesis protein A ABE28_004890 IPR002933 Peptidase M20 ABE28_004890 IPR011650 Peptidase M20, dimerisation domain ABE28_004890 IPR037484 AmhX-like ABE28_004890 IPR017439 Amidohydrolase ABE28_004890 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_004900 IPR007390 Sporulation stage V, protein R ABE28_004905 IPR011701 Major facilitator superfamily ABE28_004905 IPR020846 Major facilitator superfamily domain ABE28_004905 IPR036259 MFS transporter superfamily ABE28_004910 IPR023059 Foldase protein PrsA ABE28_004910 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ABE28_004910 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ABE28_004910 IPR027304 Trigger factor/SurA domain superfamily ABE28_004915 IPR001789 Signal transduction response regulator, receiver domain ABE28_004915 IPR037522 HD-GYP domain ABE28_004915 IPR003607 HD/PDEase domain ABE28_004915 IPR021800 Domain of unknown function DUF3369 ABE28_004915 IPR011006 CheY-like superfamily ABE28_004925 IPR032816 SNARE associated Golgi protein ABE28_004925 IPR015414 Transmembrane protein TMEM64 ABE28_004930 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004930 IPR039420 Transcriptional regulatory protein WalR-like ABE28_004930 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB ABE28_004930 IPR001789 Signal transduction response regulator, receiver domain ABE28_004930 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_004930 IPR011006 CheY-like superfamily ABE28_004935 IPR031967 PhoR, single Cache-like domain ABE28_004935 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_004935 IPR013767 PAS fold ABE28_004935 IPR035965 PAS domain superfamily ABE28_004935 IPR000014 PAS domain ABE28_004935 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_004935 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_004935 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004935 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_004935 IPR005467 Histidine kinase domain ABE28_004955 IPR000802 Arsenical pump membrane protein, ArsB ABE28_004960 IPR003370 Chromate transporter ABE28_004965 IPR003370 Chromate transporter ABE28_004975 IPR036259 MFS transporter superfamily ABE28_004975 IPR020846 Major facilitator superfamily domain ABE28_004975 IPR011701 Major facilitator superfamily ABE28_004975 IPR000849 Sugar phosphate transporter ABE28_004980 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 ABE28_004980 IPR000771 Fructose-bisphosphate aldolase, class-II ABE28_004980 IPR013785 Aldolase-type TIM barrel ABE28_004985 IPR013740 Redoxin ABE28_004985 IPR036249 Thioredoxin-like superfamily ABE28_004985 IPR013766 Thioredoxin domain ABE28_004985 IPR018219 Thiol peroxidase conserved site ABE28_004985 IPR002065 Thiol peroxidase Tpx ABE28_004990 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004990 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004990 IPR011711 GntR, C-terminal ABE28_004990 IPR023730 HTH-type transcriptional repressor NanR ABE28_004990 IPR000524 Transcription regulator HTH, GntR ABE28_004990 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004995 IPR001248 Purine-cytosine permease ABE28_004995 IPR038271 Purine-cytosine permease superfamily ABE28_005000 IPR032466 Metal-dependent hydrolase ABE28_005000 IPR006680 Amidohydrolase-related ABE28_005000 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_005000 IPR017593 Allantoinase ABE28_005005 IPR029016 GAF-like domain superfamily ABE28_005005 IPR014757 Transcription regulator IclR, C-terminal ABE28_005005 IPR005471 Transcription regulator IclR, N-terminal ABE28_005005 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005005 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005010 IPR005474 Transketolase, N-terminal ABE28_005010 IPR029061 Thiamin diphosphate-binding fold ABE28_005015 IPR029061 Thiamin diphosphate-binding fold ABE28_005015 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_005015 IPR005477 Deoxyxylulose-5-phosphate synthase ABE28_005015 IPR005474 Transketolase, N-terminal ABE28_005015 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_005015 IPR020826 Transketolase binding site ABE28_005015 IPR033248 Transketolase, C-terminal domain ABE28_005025 IPR012000 Thiamine pyrophosphate enzyme, central domain ABE28_005025 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_005025 IPR006397 Glyoxylate carboligase ABE28_005025 IPR029061 Thiamin diphosphate-binding fold ABE28_005025 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_005025 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_005035 IPR002933 Peptidase M20 ABE28_005035 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_005035 IPR010158 Amidase, carbamoylase-type ABE28_005035 IPR011650 Peptidase M20, dimerisation domain ABE28_005040 IPR012914 Purine catabolism PurC-like domain ABE28_005040 IPR041522 CdaR, GGDEF-like domain ABE28_005040 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_005040 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_005045 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_005045 IPR006680 Amidohydrolase-related ABE28_005045 IPR017593 Allantoinase ABE28_005045 IPR002195 Dihydroorotase, conserved site ABE28_005045 IPR032466 Metal-dependent hydrolase ABE28_005050 IPR008579 Domain of unknown function DUF861, cupin-3 ABE28_005050 IPR014710 RmlC-like jelly roll fold ABE28_005050 IPR011051 RmlC-like cupin domain superfamily ABE28_005050 IPR013096 Cupin 2, conserved barrel ABE28_005050 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein ABE28_005060 IPR006043 Xanthine/uracil/vitamin C permease ABE28_005060 IPR006042 Xanthine/uracil permease ABE28_005065 IPR011076 Malate synthase-like superfamily ABE28_005065 IPR023310 Malate synthase G, beta sub-domain ABE28_005065 IPR001465 Malate synthase ABE28_005065 IPR006253 Malate synthase G ABE28_005080 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase ABE28_005080 IPR000192 Aminotransferase class V domain ABE28_005080 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_005080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_005080 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_005080 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005090 IPR000873 AMP-dependent synthetase/ligase ABE28_005090 IPR011880 Phenylacetate-CoA ligase ABE28_005090 IPR042099 AMP-dependent synthetase-like superfamily ABE28_005090 IPR028154 AMP-dependent ligase, C-terminal ABE28_005095 IPR012347 Ferritin-like ABE28_005095 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C ABE28_005095 IPR009078 Ferritin-like superfamily ABE28_005095 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A ABE28_005120 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005120 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_005120 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_005120 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005125 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_005125 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005125 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005125 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB ABE28_005130 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_005130 IPR015590 Aldehyde dehydrogenase domain ABE28_005130 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ABE28_005130 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_005130 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_005130 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_005135 IPR022694 3-hydroxyacyl-CoA dehydrogenase ABE28_005135 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_005135 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_005135 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_005135 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_005135 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ABE28_005135 IPR036291 NAD(P)-binding domain superfamily ABE28_005140 IPR016039 Thiolase-like ABE28_005140 IPR012793 Beta-ketoadipyl CoA thiolase ABE28_005140 IPR002155 Thiolase ABE28_005140 IPR020610 Thiolase, active site ABE28_005140 IPR020617 Thiolase, C-terminal ABE28_005140 IPR020615 Thiolase, acyl-enzyme intermediate active site ABE28_005140 IPR020616 Thiolase, N-terminal ABE28_005140 IPR020613 Thiolase, conserved site ABE28_005145 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005145 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005145 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_005145 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_005150 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX ABE28_005150 IPR013225 PaaX-like, C-terminal ABE28_005150 IPR012906 PaaX-like, N-terminal ABE28_005150 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005155 IPR001451 Hexapeptide repeat ABE28_005155 IPR011004 Trimeric LpxA-like superfamily ABE28_005160 IPR013785 Aldolase-type TIM barrel ABE28_005160 IPR004136 Nitronate monooxygenase ABE28_005165 IPR032816 SNARE associated Golgi protein ABE28_005175 IPR027469 Cation efflux transmembrane domain superfamily ABE28_005175 IPR002524 Cation efflux protein ABE28_005175 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_005175 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ABE28_005180 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_005180 IPR001789 Signal transduction response regulator, receiver domain ABE28_005180 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_005180 IPR011006 CheY-like superfamily ABE28_005180 IPR039420 Transcriptional regulatory protein WalR-like ABE28_005180 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005185 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005185 IPR031967 PhoR, single Cache-like domain ABE28_005185 IPR005467 Histidine kinase domain ABE28_005185 IPR000014 PAS domain ABE28_005185 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_005185 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_005185 IPR035965 PAS domain superfamily ABE28_005185 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_005185 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005185 IPR013767 PAS fold ABE28_005190 IPR006504 Transcriptional regulator Spx/MgsR ABE28_005190 IPR036249 Thioredoxin-like superfamily ABE28_005190 IPR006660 Arsenate reductase-like ABE28_005190 IPR023731 Regulatory protein Spx ABE28_005195 IPR035906 MetI-like superfamily ABE28_005195 IPR011867 Molybdate ABC transporter, permease protein ABE28_005195 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_005205 IPR012156 Cold shock, CspA ABE28_005205 IPR011129 Cold shock domain ABE28_005205 IPR019844 Cold-shock (CSD) domain ABE28_005205 IPR012340 Nucleic acid-binding, OB-fold ABE28_005205 IPR002059 Cold-shock protein, DNA-binding ABE28_005210 IPR029039 Flavoprotein-like superfamily ABE28_005210 IPR008254 Flavodoxin/nitric oxide synthase ABE28_005210 IPR010087 Flavodoxin, short chain ABE28_005210 IPR001094 Flavodoxin-like ABE28_005215 IPR012348 Ribonucleotide reductase-like ABE28_005215 IPR000358 Ribonucleotide reductase small subunit family ABE28_005215 IPR033909 Ribonucleotide reductase small subunit ABE28_005215 IPR009078 Ferritin-like superfamily ABE28_005220 IPR013509 Ribonucleotide reductase large subunit, N-terminal ABE28_005220 IPR000788 Ribonucleotide reductase large subunit, C-terminal ABE28_005220 IPR013346 Ribonucleotide reductase, class I , alpha subunit ABE28_005220 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal ABE28_005220 IPR005144 ATP-cone domain ABE28_005220 IPR039718 Ribonucleoside-diphosphate reductase large subunit ABE28_005225 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable ABE28_005225 IPR038222 DHHA2 domain superfamily ABE28_005225 IPR004097 DHHA2 domain ABE28_005225 IPR038763 DHH phosphoesterase superfamily ABE28_005225 IPR001667 DDH domain ABE28_005250 IPR011701 Major facilitator superfamily ABE28_005250 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_005250 IPR036259 MFS transporter superfamily ABE28_005250 IPR020846 Major facilitator superfamily domain ABE28_005255 IPR014738 Citrate transporter ABE28_005255 IPR004680 Citrate transporter-like domain ABE28_005270 IPR013785 Aldolase-type TIM barrel ABE28_005270 IPR004136 Nitronate monooxygenase ABE28_005275 IPR000182 GNAT domain ABE28_005275 IPR016181 Acyl-CoA N-acyltransferase ABE28_005280 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_005280 IPR033879 Undecaprenyl-diphosphatase ABE28_005280 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_005285 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB ABE28_005285 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ABE28_005285 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ABE28_005290 IPR010652 Domain of unknown function DUF1232 ABE28_005295 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_005320 IPR000644 CBS domain ABE28_005320 IPR002550 CNNM, transmembrane domain ABE28_005320 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_005320 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_005320 IPR005170 Transporter-associated domain ABE28_005325 IPR003740 Uncharacterised membrane protein YitT ABE28_005325 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_005325 IPR019264 Domain of unknown function DUF2179 ABE28_005335 IPR032816 SNARE associated Golgi protein ABE28_005340 IPR000644 CBS domain ABE28_005340 IPR002550 CNNM, transmembrane domain ABE28_005340 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_005340 IPR005170 Transporter-associated domain ABE28_005340 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_005345 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_005345 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_005345 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_005345 IPR029151 Periplasmic sensor-like domain superfamily ABE28_005345 IPR005467 Histidine kinase domain ABE28_005345 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005345 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005345 IPR033479 Double Cache domain 1 ABE28_005350 IPR002524 Cation efflux protein ABE28_005350 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_005350 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ABE28_005350 IPR027469 Cation efflux transmembrane domain superfamily ABE28_005355 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_005355 IPR006015 Universal stress protein A family ABE28_005355 IPR006016 UspA ABE28_005360 IPR012338 Beta-lactamase/transpeptidase-like ABE28_005360 IPR023346 Lysozyme-like domain superfamily ABE28_005360 IPR001460 Penicillin-binding protein, transpeptidase ABE28_005360 IPR001264 Glycosyl transferase, family 51 ABE28_005360 IPR036950 Penicillin binding protein transglycosylase domain ABE28_005370 IPR006680 Amidohydrolase-related ABE28_005370 IPR010229 Peptidase M38, beta-aspartyl dipeptidase ABE28_005370 IPR032466 Metal-dependent hydrolase ABE28_005370 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_005370 IPR033826 Isoaspartyl-dipeptidase ABE28_005375 IPR001017 Dehydrogenase, E1 component ABE28_005375 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha ABE28_005375 IPR029061 Thiamin diphosphate-binding fold ABE28_005380 IPR029061 Thiamin diphosphate-binding fold ABE28_005380 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_005380 IPR033248 Transketolase, C-terminal domain ABE28_005380 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_005385 IPR011053 Single hybrid motif ABE28_005385 IPR004167 Peripheral subunit-binding domain ABE28_005385 IPR036625 E3-binding domain superfamily ABE28_005385 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ABE28_005385 IPR000089 Biotin/lipoyl attachment ABE28_005385 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ABE28_005385 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ABE28_005390 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_005390 IPR006258 Dihydrolipoamide dehydrogenase ABE28_005390 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ABE28_005390 IPR023753 FAD/NAD(P)-binding domain ABE28_005390 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_005390 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ABE28_005390 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ABE28_005395 IPR004841 Amino acid permease/ SLC12A domain ABE28_005400 IPR005861 Histidinol-phosphate aminotransferase family ABE28_005400 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005400 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ABE28_005400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_005400 IPR004839 Aminotransferase, class I/classII ABE28_005400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_005405 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005405 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABE28_005405 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_005405 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005405 IPR019888 Transcription regulator AsnC-type ABE28_005405 IPR011008 Dimeric alpha-beta barrel ABE28_005405 IPR000485 AsnC-type HTH domain ABE28_005405 IPR011991 ArsR-like helix-turn-helix domain ABE28_005415 IPR000485 AsnC-type HTH domain ABE28_005415 IPR011008 Dimeric alpha-beta barrel ABE28_005415 IPR019888 Transcription regulator AsnC-type ABE28_005415 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_005415 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005415 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005420 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005420 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_005420 IPR013325 RNA polymerase sigma factor, region 2 ABE28_005420 IPR007627 RNA polymerase sigma-70 region 2 ABE28_005420 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_005420 IPR014284 RNA polymerase sigma-70 like domain ABE28_005420 IPR039425 RNA polymerase sigma-70 like ABE28_005420 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_005435 IPR002765 Uncharacterised protein family UPF0145 ABE28_005435 IPR035439 UPF0145 domain superfamily ABE28_005440 IPR029760 Glutathione peroxidase conserved site ABE28_005440 IPR000889 Glutathione peroxidase ABE28_005440 IPR036249 Thioredoxin-like superfamily ABE28_005445 IPR020835 Catalase superfamily ABE28_005445 IPR002226 Catalase haem-binding site ABE28_005445 IPR037060 Catalase core domain superfamily ABE28_005445 IPR011614 Catalase core domain ABE28_005445 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 ABE28_005445 IPR010582 Catalase immune-responsive domain ABE28_005445 IPR024708 Catalase active site ABE28_005445 IPR018028 Catalase, mono-functional, haem-containing ABE28_005450 IPR011009 Protein kinase-like domain superfamily ABE28_005450 IPR000719 Protein kinase domain ABE28_005450 IPR004147 UbiB domain ABE28_005460 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 IPR036291 NAD(P)-binding domain superfamily ABE28_005460 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_005475 IPR013785 Aldolase-type TIM barrel ABE28_005475 IPR000644 CBS domain ABE28_005475 IPR005990 Inosine-5'-monophosphate dehydrogenase ABE28_005475 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ABE28_005475 IPR001093 IMP dehydrogenase/GMP reductase ABE28_005490 IPR019658 Protein of unknown function DUF2515 ABE28_005495 IPR017871 ABC transporter, conserved site ABE28_005495 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005495 IPR039421 Type I protein exporter ABE28_005495 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_005495 IPR003439 ABC transporter-like ABE28_005495 IPR003593 AAA+ ATPase domain ABE28_005495 IPR011527 ABC transporter type 1, transmembrane domain ABE28_005500 IPR039421 Type I protein exporter ABE28_005500 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005500 IPR017871 ABC transporter, conserved site ABE28_005500 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_005500 IPR003439 ABC transporter-like ABE28_005500 IPR011527 ABC transporter type 1, transmembrane domain ABE28_005500 IPR003593 AAA+ ATPase domain ABE28_005505 IPR042105 Ribosomal protein L31 superfamily ABE28_005505 IPR034704 L28p-like ABE28_005505 IPR002150 Ribosomal protein L31 ABE28_005505 IPR027493 Ribosomal protein L31 type B ABE28_005510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_005510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_005510 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ABE28_005510 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005515 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ABE28_005515 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_005515 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005515 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_005520 IPR018951 Fumarase C, C-terminal ABE28_005520 IPR022761 Fumarate lyase, N-terminal ABE28_005520 IPR000362 Fumarate lyase family ABE28_005520 IPR008948 L-Aspartase-like ABE28_005520 IPR005677 Fumarate hydratase, class II ABE28_005520 IPR024083 Fumarase/histidase, N-terminal ABE28_005520 IPR020557 Fumarate lyase, conserved site ABE28_005530 IPR003439 ABC transporter-like ABE28_005530 IPR017871 ABC transporter, conserved site ABE28_005530 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_005530 IPR040582 MalK, OB fold domain ABE28_005530 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005530 IPR003593 AAA+ ATPase domain ABE28_005530 IPR005116 Transport-associated OB, type 1 ABE28_005535 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_005535 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_005540 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ABE28_005540 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ABE28_005540 IPR016205 Glycerol dehydrogenase ABE28_005545 IPR004872 Lipoprotein NlpA family ABE28_005550 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_005550 IPR035906 MetI-like superfamily ABE28_005555 IPR018449 NIL domain ABE28_005555 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005555 IPR003593 AAA+ ATPase domain ABE28_005555 IPR003439 ABC transporter-like ABE28_005555 IPR026253 Methionine import ATP-binding protein MetN ABE28_005555 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ABE28_005555 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ABE28_005555 IPR017871 ABC transporter, conserved site ABE28_005580 IPR026838 Endospore coat-associated protein YheC/D ABE28_005585 IPR026838 Endospore coat-associated protein YheC/D ABE28_005590 IPR026838 Endospore coat-associated protein YheC/D ABE28_005590 IPR013815 ATP-grasp fold, subdomain 1 ABE28_005600 IPR023378 YheA/YmcA-like domain superfamily ABE28_005600 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_005605 IPR023214 HAD superfamily ABE28_005605 IPR036412 HAD-like superfamily ABE28_005605 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_005605 IPR000150 Cof family ABE28_005630 IPR020845 AMP-binding, conserved site ABE28_005630 IPR000873 AMP-dependent synthetase/ligase ABE28_005630 IPR042099 AMP-dependent synthetase-like superfamily ABE28_005630 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_005635 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_005635 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005635 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005640 IPR025544 YhzD-like protein ABE28_005645 IPR005859 Cysteine synthase CysK ABE28_005645 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_005645 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_005645 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ABE28_005645 IPR005856 Cysteine synthase ABE28_005650 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_005650 IPR014576 Predicted phosphoesterase, YhaO type ABE28_005650 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain ABE28_005650 IPR029052 Metallo-dependent phosphatase-like ABE28_005655 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005655 IPR038734 Uncharacterized protein YhaN, AAA domain ABE28_005665 IPR017871 ABC transporter, conserved site ABE28_005665 IPR003593 AAA+ ATPase domain ABE28_005665 IPR003439 ABC transporter-like ABE28_005665 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005675 IPR023048 NADH-azoreductase, FMN-dependent ABE28_005675 IPR003680 Flavodoxin-like fold ABE28_005675 IPR029039 Flavoprotein-like superfamily ABE28_005685 IPR024188 Glutamate synthase large subunit-like protein ABE28_005685 IPR027283 Glutamate synthase large subunit-like protein, bacteria ABE28_005685 IPR013785 Aldolase-type TIM barrel ABE28_005685 IPR002932 Glutamate synthase domain ABE28_005690 IPR006674 HD domain ABE28_005690 IPR020873 3'-5' exoribonuclease YhaM ABE28_005690 IPR003607 HD/PDEase domain ABE28_005695 IPR025428 Sporulation protein YhaL ABE28_005700 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type ABE28_005700 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site ABE28_005700 IPR037041 Trigger factor, C-terminal domain superfamily ABE28_005700 IPR023059 Foldase protein PrsA ABE28_005700 IPR027304 Trigger factor/SurA domain superfamily ABE28_005700 IPR008880 Trigger factor, C-terminal ABE28_005705 IPR010070 Sporulation protein YjcZ-like ABE28_005725 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005725 IPR000835 MarR-type HTH domain ABE28_005725 IPR023488 HTH-type transcriptional regulator Hpr ABE28_005725 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005725 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_005730 IPR036191 RRF superfamily ABE28_005730 IPR024623 Uncharacterised protein family YtxH ABE28_005740 IPR031360 Tryptophan transporter TrpP ABE28_005745 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005745 IPR022278 Phosphoserine aminotransferase ABE28_005745 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_005745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_005745 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_005745 IPR000192 Aminotransferase class V domain ABE28_005750 IPR036265 HIT-like superfamily ABE28_005750 IPR011146 HIT-like domain ABE28_005750 IPR039384 HINT family ABE28_005750 IPR001310 Histidine triad (HIT) protein ABE28_005750 IPR019808 Histidine triad, conserved site ABE28_005755 IPR003593 AAA+ ATPase domain ABE28_005755 IPR003439 ABC transporter-like ABE28_005755 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005760 IPR010288 Bacterial ABC transporter EcsB ABE28_005765 IPR024787 EcsC protein ABE28_005770 IPR011650 Peptidase M20, dimerisation domain ABE28_005770 IPR002933 Peptidase M20 ABE28_005770 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_005770 IPR017439 Amidohydrolase ABE28_005780 IPR011008 Dimeric alpha-beta barrel ABE28_005780 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_005785 IPR006361 Uroporphyrinogen decarboxylase HemE ABE28_005785 IPR038071 UROD/MetE-like superfamily ABE28_005785 IPR000257 Uroporphyrinogen decarboxylase (URO-D) ABE28_005795 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_005795 IPR009057 Homeobox-like domain superfamily ABE28_005795 IPR001647 DNA-binding HTH domain, TetR-type ABE28_005795 IPR041490 HTH-type transcriptional repressor KstR2, C-terminal ABE28_005795 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_005800 IPR025432 YhfH-like protein ABE28_005805 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005805 IPR001279 Metallo-beta-lactamase ABE28_005810 IPR004562 Lipoyltransferase/lipoate-protein ligase ABE28_005810 IPR019491 Lipoate protein ligase, C-terminal ABE28_005810 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ABE28_005815 IPR000873 AMP-dependent synthetase/ligase ABE28_005815 IPR020845 AMP-binding, conserved site ABE28_005815 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_005815 IPR020459 AMP-binding ABE28_005815 IPR042099 AMP-dependent synthetase-like superfamily ABE28_005820 IPR006675 HDIG domain ABE28_005820 IPR006674 HD domain ABE28_005820 IPR003607 HD/PDEase domain ABE28_005825 IPR000792 Transcription regulator LuxR, C-terminal ABE28_005825 IPR001789 Signal transduction response regulator, receiver domain ABE28_005825 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_005825 IPR011006 CheY-like superfamily ABE28_005830 IPR032456 CAAX prenyl protease 1, N-terminal ABE28_005830 IPR001915 Peptidase M48 ABE28_005830 IPR027057 CAAX prenyl protease 1 ABE28_005835 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_005835 IPR003740 Uncharacterised membrane protein YitT ABE28_005835 IPR019264 Domain of unknown function DUF2179 ABE28_005845 IPR010461 Competence protein ComK ABE28_005855 IPR032816 SNARE associated Golgi protein ABE28_005855 IPR015414 Transmembrane protein TMEM64 ABE28_005860 IPR019756 Peptidase S26A, signal peptidase I, serine active site ABE28_005860 IPR019758 Peptidase S26A, signal peptidase I, conserved site ABE28_005860 IPR000223 Peptidase S26A, signal peptidase I ABE28_005860 IPR019533 Peptidase S26 ABE28_005860 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ABE28_005860 IPR036286 LexA/Signal peptidase-like superfamily ABE28_005865 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABE28_005865 IPR014017 UvrD-like DNA helicase, C-terminal ABE28_005865 IPR014140 DNA helicase subunit AddB ABE28_005865 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_005865 IPR000212 DNA helicase, UvrD/REP type ABE28_005865 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005870 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABE28_005870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005870 IPR014152 DNA helicase subunit AddA ABE28_005870 IPR014017 UvrD-like DNA helicase, C-terminal ABE28_005870 IPR034739 UvrD/AddA helicase, N-terminal ABE28_005870 IPR000212 DNA helicase, UvrD/REP type ABE28_005870 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABE28_005870 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_005870 IPR011335 Restriction endonuclease type II-like ABE28_005885 IPR017257 Spore germination protein GerPD, predicted ABE28_005890 IPR019673 Spore germination protein GerPC ABE28_005895 IPR024255 Spore germination GerPB ABE28_005900 IPR019618 Spore germination protein GerPA/GerPF ABE28_005905 IPR020846 Major facilitator superfamily domain ABE28_005905 IPR036259 MFS transporter superfamily ABE28_005905 IPR011701 Major facilitator superfamily ABE28_005910 IPR007349 Domain of unknown function DUF418 ABE28_005915 IPR010899 Protein of unknown function UPF0344 ABE28_005925 IPR017932 Glutamine amidotransferase type 2 domain ABE28_005925 IPR033738 Asparagine synthase, N-terminal domain ABE28_005925 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_005925 IPR001962 Asparagine synthase ABE28_005925 IPR006426 Asparagine synthase, glutamine-hydrolyzing ABE28_005930 IPR032091 Maltogenic Amylase, C-terminal ABE28_005930 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_005930 IPR013780 Glycosyl hydrolase, all-beta ABE28_005930 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain ABE28_005930 IPR013783 Immunoglobulin-like fold ABE28_005930 IPR017853 Glycoside hydrolase superfamily ABE28_005935 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein ABE28_005935 IPR006059 Bacterial extracellular solute-binding protein ABE28_005940 IPR013780 Glycosyl hydrolase, all-beta ABE28_005940 IPR002044 Carbohydrate binding module family 20 ABE28_005940 IPR013783 Immunoglobulin-like fold ABE28_005940 IPR014756 Immunoglobulin E-set ABE28_005940 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta ABE28_005940 IPR013784 Carbohydrate-binding-like fold ABE28_005940 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_005940 IPR006046 Alpha amylase ABE28_005940 IPR017853 Glycoside hydrolase superfamily ABE28_005940 IPR031319 Alpha-amylase, C-terminal domain ABE28_005945 IPR032091 Maltogenic Amylase, C-terminal ABE28_005945 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_005945 IPR013780 Glycosyl hydrolase, all-beta ABE28_005945 IPR017853 Glycoside hydrolase superfamily ABE28_005950 IPR000843 LacI-type HTH domain ABE28_005950 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_005950 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_005950 IPR028082 Periplasmic binding protein-like I ABE28_005955 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain ABE28_005955 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain ABE28_005955 IPR017782 Hydroxyacylglutathione hydrolase ABE28_005955 IPR001279 Metallo-beta-lactamase ABE28_005955 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005960 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_005960 IPR036291 NAD(P)-binding domain superfamily ABE28_005965 IPR035571 UPF0234-like, C-terminal ABE28_005965 IPR007551 Protein of unknown function DUF520 ABE28_005965 IPR036183 YajQ-like superfamily ABE28_005965 IPR035570 UPF0234, N-terminal ABE28_005970 IPR003797 DegV ABE28_005975 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_005975 IPR019264 Domain of unknown function DUF2179 ABE28_005975 IPR003740 Uncharacterised membrane protein YitT ABE28_005980 IPR038956 Late embryogenesis abundant protein, LEA_5 subgroup ABE28_005980 IPR019626 Stress-induced protein, KGG, repeat ABE28_005985 IPR024217 Protein of unknown function DUF3813 ABE28_005995 IPR000150 Cof family ABE28_005995 IPR036412 HAD-like superfamily ABE28_005995 IPR023214 HAD superfamily ABE28_005995 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_006000 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ABE28_006000 IPR029058 Alpha/Beta hydrolase fold ABE28_006005 IPR034904 Fe-S cluster assembly domain superfamily ABE28_006005 IPR002744 MIP18 family-like ABE28_006010 IPR013785 Aldolase-type TIM barrel ABE28_006010 IPR010505 Molybdenum cofactor synthesis C-terminal ABE28_006010 IPR013483 Molybdenum cofactor biosynthesis protein A ABE28_006010 IPR006638 Elp3/MiaB/NifB ABE28_006010 IPR007197 Radical SAM ABE28_006010 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site ABE28_006015 IPR014710 RmlC-like jelly roll fold ABE28_006015 IPR018490 Cyclic nucleotide-binding-like ABE28_006015 IPR012318 Crp-type HTH domain ABE28_006015 IPR036390 Winged helix DNA-binding domain superfamily ABE28_006015 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006015 IPR000595 Cyclic nucleotide-binding domain ABE28_006015 IPR018335 Transcription regulator HTH, Crp-type, conserved site ABE28_006020 IPR000534 Semialdehyde dehydrogenase, NAD-binding ABE28_006020 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site ABE28_006020 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ABE28_006020 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 ABE28_006020 IPR036291 NAD(P)-binding domain superfamily ABE28_006025 IPR042195 ArgJ beta chain, C-terminal domain ABE28_006025 IPR016117 ArgJ-like domain superfamily ABE28_006025 IPR002813 Arginine biosynthesis protein ArgJ ABE28_006030 IPR037528 Acetylglutamate kinase ArgB ABE28_006030 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_006030 IPR004662 Acetylglutamate kinase family ABE28_006030 IPR036393 Acetylglutamate kinase-like superfamily ABE28_006035 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_006035 IPR004636 Acetylornithine/Succinylornithine transaminase family ABE28_006035 IPR005814 Aminotransferase class-III ABE28_006035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_006035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_006040 IPR006274 Carbamoyl-phosphate synthase, small subunit ABE28_006040 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain ABE28_006040 IPR017926 Glutamine amidotransferase ABE28_006040 IPR029062 Class I glutamine amidotransferase-like ABE28_006040 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily ABE28_006040 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain ABE28_006045 IPR011761 ATP-grasp fold ABE28_006045 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain ABE28_006045 IPR011607 Methylglyoxal synthase-like domain ABE28_006045 IPR013815 ATP-grasp fold, subdomain 1 ABE28_006045 IPR006275 Carbamoyl-phosphate synthase, large subunit ABE28_006045 IPR016185 Pre-ATP-grasp domain superfamily ABE28_006045 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily ABE28_006045 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain ABE28_006045 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ABE28_006050 IPR024904 Ornithine carbamoyltransferase ABE28_006050 IPR002292 Ornithine/putrescine carbamoyltransferase ABE28_006050 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain ABE28_006050 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily ABE28_006050 IPR006130 Aspartate/ornithine carbamoyltransferase ABE28_006050 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding ABE28_006055 IPR025549 YjzC-like protein ABE28_006060 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_006060 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_006065 IPR018368 ClpA/B, conserved site 1 ABE28_006065 IPR041546 ClpA/ClpB, AAA lid domain ABE28_006065 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006065 IPR028299 ClpA/B, conserved site 2 ABE28_006065 IPR019489 Clp ATPase, C-terminal ABE28_006065 IPR003959 ATPase, AAA-type, core ABE28_006065 IPR036628 Clp, N-terminal domain superfamily ABE28_006065 IPR017730 Chaperonin ClpB ABE28_006065 IPR004176 Clp, N-terminal ABE28_006065 IPR003593 AAA+ ATPase domain ABE28_006065 IPR001270 ClpA/B family ABE28_006075 IPR029058 Alpha/Beta hydrolase fold ABE28_006085 IPR024558 ComZ ABE28_006095 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 ABE28_006095 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal ABE28_006095 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABE28_006095 IPR016039 Thiolase-like ABE28_006100 IPR000794 Beta-ketoacyl synthase ABE28_006100 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 ABE28_006100 IPR014030 Beta-ketoacyl synthase, N-terminal ABE28_006100 IPR018201 Beta-ketoacyl synthase, active site ABE28_006100 IPR014031 Beta-ketoacyl synthase, C-terminal ABE28_006100 IPR016039 Thiolase-like ABE28_006100 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABE28_006105 IPR018728 Domain of unknown function DUF2268 ABE28_006110 IPR020909 UPF0736 ABE28_006115 IPR002306 Tryptophan-tRNA ligase ABE28_006115 IPR002305 Aminoacyl-tRNA synthetase, class Ic ABE28_006115 IPR024109 Tryptophan-tRNA ligase, bacterial-type ABE28_006115 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_006115 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_006130 IPR016181 Acyl-CoA N-acyltransferase ABE28_006130 IPR000182 GNAT domain ABE28_006140 IPR006660 Arsenate reductase-like ABE28_006140 IPR036249 Thioredoxin-like superfamily ABE28_006140 IPR006504 Transcriptional regulator Spx/MgsR ABE28_006140 IPR023731 Regulatory protein Spx ABE28_006145 IPR038471 MecA, C-terminal domain superfamily ABE28_006145 IPR008681 Negative regulator of genetic competence, MecA ABE28_006150 IPR001736 Phospholipase D/Transphosphatidylase ABE28_006150 IPR025202 Phospholipase D-like domain ABE28_006150 IPR027379 Cardiolipin synthase N-terminal ABE28_006150 IPR022924 Cardiolipin synthase ABE28_006150 IPR030874 Cardiolipin synthase, Firmicutes-type ABE28_006155 IPR021176 Competence-induced protein CoiA ABE28_006155 IPR010330 Competence-induced protein CoiA-like ABE28_006160 IPR004438 Peptidase M3B, oligoendopeptidase F ABE28_006160 IPR042088 Oligoendopeptidase F, C-terminal domain ABE28_006160 IPR013647 Oligopeptidase F, N-terminal domain ABE28_006160 IPR001567 Peptidase M3A/M3B catalytic domain ABE28_006180 IPR019795 Globin, bacterial-like, conserved site ABE28_006180 IPR001486 Truncated hemoglobin ABE28_006180 IPR009050 Globin-like superfamily ABE28_006180 IPR012292 Globin/Protoglobin ABE28_006185 IPR008258 Transglycosylase SLT domain 1 ABE28_006185 IPR023346 Lysozyme-like domain superfamily ABE28_006185 IPR000189 Prokaryotic transglycosylase, active site ABE28_006190 IPR033469 CYTH-like domain superfamily ABE28_006190 IPR023577 CYTH domain ABE28_006190 IPR009195 Uncharacterised protein family YjbK ABE28_006195 IPR007685 RelA/SpoT ABE28_006200 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal ABE28_006200 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_006200 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_006200 IPR002504 NAD kinase ABE28_006205 IPR002942 RNA-binding S4 domain ABE28_006205 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_006205 IPR006225 Pseudouridine synthase, RluC/RluD ABE28_006205 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ABE28_006205 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_006210 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase ABE28_006210 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE ABE28_006210 IPR041780 PrpE-like, metallophosphatase domain ABE28_006210 IPR029052 Metallo-dependent phosphatase-like ABE28_006210 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_006215 IPR038048 Magnesium transporter MgtE, transmembrane domain ABE28_006215 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily ABE28_006215 IPR038076 MgtE, N-terminal domain superfamily ABE28_006215 IPR000644 CBS domain ABE28_006215 IPR006667 SLC41 divalent cation transporters, integral membrane domain ABE28_006215 IPR006669 Magnesium transporter MgtE ABE28_006215 IPR006668 Magnesium transporter, MgtE intracellular domain ABE28_006220 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006220 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) ABE28_006220 IPR036291 NAD(P)-binding domain superfamily ABE28_006225 IPR002491 ABC transporter periplasmic binding domain ABE28_006240 IPR010773 Mycobacterium phage PG1, Gp7 ABE28_006250 IPR014203 Sporulation stage V, protein AC ABE28_006250 IPR005562 SpoVA ABE28_006255 IPR016039 Thiolase-like ABE28_006255 IPR038369 Stage V sporulation AD superfamily ABE28_006255 IPR010894 Stage V sporulation AD ABE28_006260 IPR005562 SpoVA ABE28_006260 IPR014204 Sporulation stage V, protein AE ABE28_006265 IPR025942 Stage VI sporulation protein F ABE28_006270 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_006270 IPR034739 UvrD/AddA helicase, N-terminal ABE28_006270 IPR013986 DExx box DNA helicase domain superfamily ABE28_006270 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006270 IPR014017 UvrD-like DNA helicase, C-terminal ABE28_006270 IPR000212 DNA helicase, UvrD/REP type ABE28_006280 IPR011428 Spore coat protein X/V ABE28_006290 IPR000182 GNAT domain ABE28_006290 IPR039143 Glucosamine 6-phosphate N-acetyltransferase ABE28_006290 IPR016181 Acyl-CoA N-acyltransferase ABE28_006295 IPR022932 Putative phosphoesterase YjcG ABE28_006295 IPR009097 Cyclic phosphodiesterase ABE28_006300 IPR000801 Putative esterase ABE28_006300 IPR029058 Alpha/Beta hydrolase fold ABE28_006305 IPR026038 Putative phosphatidylglycerophosphatase ABE28_006305 IPR036681 PgpA-like superfamily ABE28_006305 IPR007686 YutG/PgpA domain ABE28_006320 IPR021354 Protein of unknown function DUF2975 ABE28_006325 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_006325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_006330 IPR014218 RNA polymerase sigma-H type ABE28_006330 IPR014284 RNA polymerase sigma-70 like domain ABE28_006330 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_006330 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_006330 IPR013325 RNA polymerase sigma factor, region 2 ABE28_006330 IPR016371 RNA polymerase sigma-H factor ABE28_006330 IPR000792 Transcription regulator LuxR, C-terminal ABE28_006330 IPR000943 RNA polymerase sigma-70 ABE28_006330 IPR007627 RNA polymerase sigma-70 region 2 ABE28_006345 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain ABE28_006345 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_006345 IPR001406 Pseudouridine synthase I, TruA ABE28_006345 IPR020095 Pseudouridine synthase I, TruA, C-terminal ABE28_006350 IPR002818 DJ-1/PfpI ABE28_006350 IPR029062 Class I glutamine amidotransferase-like ABE28_006350 IPR006286 Deglycase PfpI ABE28_006355 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_006355 IPR013525 ABC-2 type transporter ABE28_006355 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_006360 IPR003156 DHHA1 domain ABE28_006360 IPR001667 DDH domain ABE28_006360 IPR038763 DHH phosphoesterase superfamily ABE28_006365 IPR023606 CoA-transferase family III domain superfamily ABE28_006365 IPR003673 CoA-transferase family III ABE28_006370 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_006370 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_006370 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_006370 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_006370 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_006370 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_006370 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_006385 IPR014867 Spore coat protein CotH ABE28_006395 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_006395 IPR001279 Metallo-beta-lactamase ABE28_006395 IPR017782 Hydroxyacylglutathione hydrolase ABE28_006395 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain ABE28_006395 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain ABE28_006400 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ABE28_006400 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_006400 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_006400 IPR036291 NAD(P)-binding domain superfamily ABE28_006400 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_006405 IPR036259 MFS transporter superfamily ABE28_006405 IPR020846 Major facilitator superfamily domain ABE28_006405 IPR004812 Drug resistance transporter Bcr/CmlA subfamily ABE28_006405 IPR011701 Major facilitator superfamily ABE28_006410 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_006410 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 IPR036291 NAD(P)-binding domain superfamily ABE28_006415 IPR004104 Oxidoreductase, C-terminal ABE28_006415 IPR000683 Oxidoreductase, N-terminal ABE28_006415 IPR036291 NAD(P)-binding domain superfamily ABE28_006425 IPR013785 Aldolase-type TIM barrel ABE28_006425 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ABE28_006430 IPR028082 Periplasmic binding protein-like I ABE28_006430 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_006430 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_006430 IPR000843 LacI-type HTH domain ABE28_006435 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related ABE28_006435 IPR017853 Glycoside hydrolase superfamily ABE28_006435 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_006435 IPR033746 Glucosylglycerate phosphorylase ABE28_006440 IPR006059 Bacterial extracellular solute-binding protein ABE28_006445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006445 IPR035906 MetI-like superfamily ABE28_006450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006450 IPR035906 MetI-like superfamily ABE28_006455 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_006455 IPR011032 GroES-like superfamily ABE28_006455 IPR036291 NAD(P)-binding domain superfamily ABE28_006460 IPR036237 Xylose isomerase-like superfamily ABE28_006460 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_006465 IPR036291 NAD(P)-binding domain superfamily ABE28_006465 IPR000683 Oxidoreductase, N-terminal ABE28_006465 IPR004104 Oxidoreductase, C-terminal ABE28_006470 IPR005196 Glycoside hydrolase, family 65, N-terminal ABE28_006470 IPR005195 Glycoside hydrolase, family 65, central catalytic ABE28_006470 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase ABE28_006470 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily ABE28_006470 IPR011013 Galactose mutarotase-like domain superfamily ABE28_006470 IPR012341 Six-hairpin glycosidase-like superfamily ABE28_006470 IPR005194 Glycoside hydrolase family 65, C-terminal ABE28_006470 IPR008928 Six-hairpin glycosidase superfamily ABE28_006475 IPR036129 Glycerate kinase superfamily ABE28_006475 IPR018197 Glycerate kinase, restriction-enzyme-like fold ABE28_006475 IPR018193 Glycerate kinase, flavodoxin-like fold ABE28_006475 IPR004381 Glycerate kinase ABE28_006480 IPR036412 HAD-like superfamily ABE28_006480 IPR010972 Beta-phosphoglucomutase ABE28_006480 IPR010976 Beta-phosphoglucomutase hydrolase ABE28_006480 IPR006439 HAD hydrolase, subfamily IA ABE28_006480 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_006480 IPR041492 Haloacid dehalogenase-like hydrolase ABE28_006480 IPR023214 HAD superfamily ABE28_006485 IPR036513 STAS domain superfamily ABE28_006485 IPR002645 STAS domain ABE28_006485 IPR001902 SLC26A/SulP transporter ABE28_006485 IPR011547 SLC26A/SulP transporter domain ABE28_006490 IPR000551 MerR-type HTH domain ABE28_006490 IPR009061 Putative DNA-binding domain superfamily ABE28_006495 IPR029058 Alpha/Beta hydrolase fold ABE28_006495 IPR002018 Carboxylesterase, type B ABE28_006495 IPR000997 Cholinesterase ABE28_006495 IPR019826 Carboxylesterase type B, active site ABE28_006495 IPR019819 Carboxylesterase type B, conserved site ABE28_006500 IPR004840 Amino acid permease, conserved site ABE28_006500 IPR011265 GABA permease ABE28_006500 IPR004841 Amino acid permease/ SLC12A domain ABE28_006505 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_006505 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase ABE28_006505 IPR004821 Cytidyltransferase-like domain ABE28_006510 IPR005669 Thiosulphate/Sulfate-binding protein ABE28_006510 IPR000957 Sulphate/thiosulphate-binding, conserved site ABE28_006510 IPR034408 Sulphate/thiosulphate-binding site ABE28_006515 IPR035906 MetI-like superfamily ABE28_006515 IPR005667 Sulphate ABC transporter permease protein 2 ABE28_006515 IPR011865 Sulphate ABC transporter, permease protein CysT ABE28_006515 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006520 IPR011866 Sulphate ABC transporter, permease protein CysW ABE28_006520 IPR005667 Sulphate ABC transporter permease protein 2 ABE28_006520 IPR035906 MetI-like superfamily ABE28_006520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006525 IPR041193 CysA, C-terminal regulatory domain ABE28_006525 IPR003593 AAA+ ATPase domain ABE28_006525 IPR014769 ABC transporter, sulphate/thiosulphate import, ATP-binding protein CysA, C-terminal ABE28_006525 IPR003439 ABC transporter-like ABE28_006525 IPR017871 ABC transporter, conserved site ABE28_006525 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_006525 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006525 IPR005666 Sulphate transport system permease protein 1 ABE28_006525 IPR024765 TOBE-like domain ABE28_006530 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_006530 IPR038765 Papain-like cysteine peptidase superfamily ABE28_006545 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase ABE28_006545 IPR014718 Glycoside hydrolase-type carbohydrate-binding ABE28_006545 IPR011013 Galactose mutarotase-like domain superfamily ABE28_006550 IPR002293 Amino acid/polyamine transporter I ABE28_006555 IPR018743 Protein of unknown function DUF2292 ABE28_006560 IPR012338 Beta-lactamase/transpeptidase-like ABE28_006560 IPR000871 Beta-lactamase, class-A ABE28_006560 IPR023650 Beta-lactamase, class-A active site ABE28_006575 IPR002059 Cold-shock protein, DNA-binding ABE28_006575 IPR019844 Cold-shock (CSD) domain ABE28_006575 IPR011129 Cold shock domain ABE28_006575 IPR012340 Nucleic acid-binding, OB-fold ABE28_006575 IPR012156 Cold shock, CspA ABE28_006585 IPR035097 Peptidase M29, N-terminal ABE28_006585 IPR000787 Peptidase M29 ABE28_006590 IPR015590 Aldehyde dehydrogenase domain ABE28_006590 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_006590 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_006590 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_006590 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_006590 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ABE28_006595 IPR005829 Sugar transporter, conserved site ABE28_006595 IPR036259 MFS transporter superfamily ABE28_006595 IPR020846 Major facilitator superfamily domain ABE28_006595 IPR011701 Major facilitator superfamily ABE28_006610 IPR029056 Ribokinase-like ABE28_006610 IPR034291 Thiamine phosphate synthase ABE28_006610 IPR022998 Thiamine phosphate synthase/TenI ABE28_006610 IPR036206 Thiamin phosphate synthase superfamily ABE28_006610 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase ABE28_006610 IPR013785 Aldolase-type TIM barrel ABE28_006610 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase ABE28_006620 IPR027574 Thiaminase II ABE28_006620 IPR004305 Thiaminase-2/PQQC ABE28_006620 IPR026285 TenA_E protein ABE28_006620 IPR016084 Haem oxygenase-like, multi-helical ABE28_006635 IPR016181 Acyl-CoA N-acyltransferase ABE28_006635 IPR000182 GNAT domain ABE28_006645 IPR039421 Type I protein exporter ABE28_006645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006645 IPR011917 ABC transporter, lipid A export, MsbA ABE28_006645 IPR017871 ABC transporter, conserved site ABE28_006645 IPR003439 ABC transporter-like ABE28_006645 IPR011527 ABC transporter type 1, transmembrane domain ABE28_006645 IPR003593 AAA+ ATPase domain ABE28_006645 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_006650 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_006650 IPR024775 DinB-like domain ABE28_006655 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_006655 IPR039561 Peptidase M15C ABE28_006660 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase ABE28_006660 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain ABE28_006660 IPR029069 HotDog domain superfamily ABE28_006660 IPR006683 Thioesterase domain ABE28_006665 IPR006214 Bax inhibitor 1-related ABE28_006670 IPR003439 ABC transporter-like ABE28_006670 IPR003593 AAA+ ATPase domain ABE28_006670 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_006670 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006670 IPR017871 ABC transporter, conserved site ABE28_006675 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_006675 IPR003593 AAA+ ATPase domain ABE28_006675 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006675 IPR017871 ABC transporter, conserved site ABE28_006675 IPR003439 ABC transporter-like ABE28_006680 IPR035906 MetI-like superfamily ABE28_006680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006685 IPR035906 MetI-like superfamily ABE28_006685 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_006690 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_006690 IPR039424 Solute-binding protein family 5 ABE28_006690 IPR000914 Solute-binding protein family 5 domain ABE28_006690 IPR023765 Solute-binding protein family 5, conserved site ABE28_006700 IPR023367 Peptidase M42, domain 2 ABE28_006700 IPR008007 Peptidase M42 ABE28_006705 IPR038725 General stress protein, FMN-binding split barrel domain ABE28_006705 IPR012349 FMN-binding split barrel ABE28_006710 IPR005320 Peptidase S51 ABE28_006710 IPR011811 Peptidase S51, cyanophycinase ABE28_006710 IPR029062 Class I glutamine amidotransferase-like ABE28_006720 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 ABE28_006720 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ABE28_006720 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes ABE28_006735 IPR030395 Glycerophosphodiester phosphodiesterase domain ABE28_006735 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ABE28_006745 IPR015946 K homology domain-like, alpha/beta ABE28_006745 IPR019953 Organic hydroperoxide resistance protein famiy ABE28_006745 IPR036102 OsmC/Ohr superfamily ABE28_006745 IPR003718 OsmC/Ohr family ABE28_006750 IPR036390 Winged helix DNA-binding domain superfamily ABE28_006750 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006750 IPR000524 Transcription regulator HTH, GntR ABE28_006755 IPR003593 AAA+ ATPase domain ABE28_006755 IPR003439 ABC transporter-like ABE28_006755 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006765 IPR012340 Nucleic acid-binding, OB-fold ABE28_006765 IPR002059 Cold-shock protein, DNA-binding ABE28_006765 IPR012156 Cold shock, CspA ABE28_006765 IPR019844 Cold-shock (CSD) domain ABE28_006765 IPR011129 Cold shock domain ABE28_006770 IPR032090 Peptide chain release factor 3, C-terminal ABE28_006770 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_006770 IPR000795 Transcription factor, GTP-binding domain ABE28_006770 IPR041732 Peptide chain release factor 3, GTP-binding domain ABE28_006770 IPR005225 Small GTP-binding protein domain ABE28_006770 IPR004161 Translation elongation factor EFTu-like, domain 2 ABE28_006770 IPR004548 Peptide chain release factor 3 ABE28_006770 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006770 IPR031157 Tr-type G domain, conserved site ABE28_006770 IPR035647 EF-G domain III/V-like ABE28_006770 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ABE28_006780 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ABE28_006780 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ABE28_006785 IPR036291 NAD(P)-binding domain superfamily ABE28_006785 IPR009081 Phosphopantetheine binding ACP domain ABE28_006785 IPR013120 Male sterility, NAD-binding ABE28_006785 IPR036736 ACP-like superfamily ABE28_006785 IPR010080 Thioester reductase-like domain ABE28_006785 IPR020806 Polyketide synthase, phosphopantetheine-binding domain ABE28_006790 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ABE28_006790 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_006790 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_006790 IPR015590 Aldehyde dehydrogenase domain ABE28_006790 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_006790 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_006795 IPR022493 Integral membrane YkoY ABE28_006795 IPR036259 MFS transporter superfamily ABE28_006795 IPR005496 Integral membrane protein TerC ABE28_006800 IPR014244 RNA polymerase sigma-I type ABE28_006800 IPR013325 RNA polymerase sigma factor, region 2 ABE28_006800 IPR014284 RNA polymerase sigma-70 like domain ABE28_006800 IPR007627 RNA polymerase sigma-70 region 2 ABE28_006805 IPR024449 Anti-sigma factor RsgI, N-terminal ABE28_006810 IPR038300 SASP, alpha/beta-type superfamily ABE28_006810 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_006810 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_006815 IPR003445 Cation transporter ABE28_006820 IPR000700 PAS-associated, C-terminal ABE28_006820 IPR013767 PAS fold ABE28_006820 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_006820 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_006820 IPR001610 PAC motif ABE28_006820 IPR005467 Histidine kinase domain ABE28_006820 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006820 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_006820 IPR035965 PAS domain superfamily ABE28_006820 IPR000014 PAS domain ABE28_006820 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006825 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_006825 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_006825 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_006825 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_006825 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_006825 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_006825 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_006830 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_006830 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_006830 IPR036291 NAD(P)-binding domain superfamily ABE28_006835 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_006835 IPR042099 AMP-dependent synthetase-like superfamily ABE28_006835 IPR020845 AMP-binding, conserved site ABE28_006835 IPR000873 AMP-dependent synthetase/ligase ABE28_006840 IPR009057 Homeobox-like domain superfamily ABE28_006840 IPR001647 DNA-binding HTH domain, TetR-type ABE28_006840 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_006840 IPR013572 Transcription regulator MAATS, C-terminal ABE28_006840 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_006845 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_006845 IPR022694 3-hydroxyacyl-CoA dehydrogenase ABE28_006845 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_006845 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_006845 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_006845 IPR036291 NAD(P)-binding domain superfamily ABE28_006845 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ABE28_006850 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_006850 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_006850 IPR029045 ClpP/crotonase-like domain superfamily ABE28_006850 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_006865 IPR036702 ComB-like superfamily ABE28_006865 IPR005238 ComB-like ABE28_006870 IPR036291 NAD(P)-binding domain superfamily ABE28_006870 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_006870 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006875 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_006875 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_006875 IPR029045 ClpP/crotonase-like domain superfamily ABE28_006875 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_006880 IPR020843 Polyketide synthase, enoylreductase domain ABE28_006880 IPR036291 NAD(P)-binding domain superfamily ABE28_006880 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site ABE28_006880 IPR011032 GroES-like superfamily ABE28_006880 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_006880 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_006895 IPR002656 Acyltransferase 3 ABE28_006900 IPR035965 PAS domain superfamily ABE28_006900 IPR000014 PAS domain ABE28_006900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_006900 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_006900 IPR005467 Histidine kinase domain ABE28_006900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_006900 IPR013767 PAS fold ABE28_006910 IPR003689 Zinc/iron permease ABE28_006915 IPR036259 MFS transporter superfamily ABE28_006915 IPR020846 Major facilitator superfamily domain ABE28_006915 IPR011701 Major facilitator superfamily ABE28_006920 IPR005467 Histidine kinase domain ABE28_006920 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_006920 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006920 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_006920 IPR029151 Periplasmic sensor-like domain superfamily ABE28_006920 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_006920 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006920 IPR033479 Double Cache domain 1 ABE28_006925 IPR036390 Winged helix DNA-binding domain superfamily ABE28_006925 IPR000835 MarR-type HTH domain ABE28_006925 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_006925 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006930 IPR042088 Oligoendopeptidase F, C-terminal domain ABE28_006930 IPR013647 Oligopeptidase F, N-terminal domain ABE28_006930 IPR001567 Peptidase M3A/M3B catalytic domain ABE28_006930 IPR004438 Peptidase M3B, oligoendopeptidase F ABE28_006935 IPR038728 Uncharacterized membrane protein YkvI ABE28_006945 IPR018690 Protein of unknown function DUF2187 ABE28_006965 IPR035437 SNase-like, OB-fold superfamily ABE28_006965 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ABE28_006965 IPR002071 Thermonuclease active site ABE28_006975 IPR005226 UPF0014 family ABE28_006980 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 IPR035895 HPr-like superfamily ABE28_006980 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ABE28_006980 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ABE28_006985 IPR008279 PEP-utilising enzyme, mobile domain ABE28_006985 IPR018274 PEP-utilising enzyme, active site ABE28_006985 IPR008731 Phosphotransferase system, enzyme I N-terminal ABE28_006985 IPR036618 PtsI, HPr-binding domain superfamily ABE28_006985 IPR036637 Phosphohistidine domain superfamily ABE28_006985 IPR024692 Phosphotransferase system, enzyme I ABE28_006985 IPR006318 Phosphotransferase system, enzyme I-like ABE28_006985 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_006985 IPR040442 Pyruvate kinase-like domain superfamily ABE28_006985 IPR023151 PEP-utilising enzyme, conserved site ABE28_006985 IPR000121 PEP-utilising enzyme, C-terminal ABE28_006990 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 IPR036291 NAD(P)-binding domain superfamily ABE28_006990 IPR014007 Acetoin reductase ABE28_006990 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_006995 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site ABE28_006995 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_006995 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain ABE28_006995 IPR036291 NAD(P)-binding domain superfamily ABE28_006995 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_006995 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ABE28_006995 IPR015815 3-hydroxyisobutyrate dehydrogenase-related ABE28_007005 IPR004839 Aminotransferase, class I/classII ABE28_007005 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_007005 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_007005 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ABE28_007005 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_007010 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB ABE28_007010 IPR004488 Magnesium/cobalt transport protein CorA ABE28_007015 IPR036061 CheW-like domain superfamily ABE28_007015 IPR024181 Chemotaxis response regulator CheV ABE28_007015 IPR001789 Signal transduction response regulator, receiver domain ABE28_007015 IPR011006 CheY-like superfamily ABE28_007015 IPR002545 CheW-like domain ABE28_007020 IPR025552 YkyB-like protein ABE28_007030 IPR003691 Putative fluoride ion transporter CrcB ABE28_007035 IPR003691 Putative fluoride ion transporter CrcB ABE28_007040 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal ABE28_007040 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_007040 IPR029052 Metallo-dependent phosphatase-like ABE28_007040 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_007045 IPR004680 Citrate transporter-like domain ABE28_007045 IPR031312 Sodium/sulphate symporter, conserved site ABE28_007045 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ABE28_007045 IPR006037 Regulator of K+ conductance, C-terminal ABE28_007050 IPR001633 EAL domain ABE28_007050 IPR035919 EAL domain superfamily ABE28_007050 IPR029151 Periplasmic sensor-like domain superfamily ABE28_007050 IPR018842 YkuI, C-terminal ABE28_007070 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_007070 IPR001279 Metallo-beta-lactamase ABE28_007075 IPR014904 Protein of unknown function DUF1797 ABE28_007075 IPR038073 YkuJ-like superfamily ABE28_007095 IPR004638 Drug resistance transporter EmrB-like ABE28_007095 IPR011701 Major facilitator superfamily ABE28_007095 IPR020846 Major facilitator superfamily domain ABE28_007095 IPR036259 MFS transporter superfamily ABE28_007095 IPR005829 Sugar transporter, conserved site ABE28_007100 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007100 IPR036390 Winged helix DNA-binding domain superfamily ABE28_007100 IPR000847 Transcription regulator HTH, LysR ABE28_007100 IPR005119 LysR, substrate-binding ABE28_007105 IPR011004 Trimeric LpxA-like superfamily ABE28_007105 IPR001451 Hexapeptide repeat ABE28_007105 IPR018357 Hexapeptide transferase, conserved site ABE28_007105 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal ABE28_007105 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH ABE28_007110 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_007110 IPR011650 Peptidase M20, dimerisation domain ABE28_007110 IPR023905 Acetyldiaminopimelate deacetylase ABE28_007110 IPR017439 Amidohydrolase ABE28_007110 IPR002933 Peptidase M20 ABE28_007115 IPR036291 NAD(P)-binding domain superfamily ABE28_007115 IPR003148 Regulator of K+ conductance, N-terminal ABE28_007115 IPR006037 Regulator of K+ conductance, C-terminal ABE28_007115 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ABE28_007120 IPR001587 Ribonuclease J, conserved site ABE28_007120 IPR030854 Ribonuclease J, bacteria ABE28_007120 IPR042173 Ribonuclease J, domain 2 ABE28_007120 IPR004613 Ribonuclease J ABE28_007120 IPR001279 Metallo-beta-lactamase ABE28_007120 IPR041636 Ribonuclease J, C-terminal ABE28_007120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_007120 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABE28_007130 IPR000150 Cof family ABE28_007130 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_007130 IPR023214 HAD superfamily ABE28_007130 IPR036412 HAD-like superfamily ABE28_007135 IPR036821 Peptide deformylase superfamily ABE28_007135 IPR023635 Peptide deformylase ABE28_007140 IPR019454 Putative cell-wall binding lipoprotein YkyA-like ABE28_007140 IPR036785 YkyA-like superfamily ABE28_007145 IPR001017 Dehydrogenase, E1 component ABE28_007145 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha ABE28_007145 IPR029061 Thiamin diphosphate-binding fold ABE28_007150 IPR033248 Transketolase, C-terminal domain ABE28_007150 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_007150 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_007150 IPR029061 Thiamin diphosphate-binding fold ABE28_007155 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ABE28_007155 IPR000089 Biotin/lipoyl attachment ABE28_007155 IPR011053 Single hybrid motif ABE28_007155 IPR004167 Peripheral subunit-binding domain ABE28_007155 IPR036625 E3-binding domain superfamily ABE28_007155 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ABE28_007155 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ABE28_007160 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_007160 IPR006258 Dihydrolipoamide dehydrogenase ABE28_007160 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ABE28_007160 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007160 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ABE28_007160 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ABE28_007160 IPR023753 FAD/NAD(P)-binding domain ABE28_007170 IPR040802 Peptidoglycan GlcNAc deacetylase, N-terminal ABE28_007170 IPR002509 NodB homology domain ABE28_007170 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_007170 IPR017219 Peptidoglycan GlcNAc deacetylase ABE28_007180 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_007180 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal ABE28_007180 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily ABE28_007180 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_007180 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_007180 IPR000310 Orn/Lys/Arg decarboxylase, major domain ABE28_007185 IPR004136 Nitronate monooxygenase ABE28_007185 IPR013785 Aldolase-type TIM barrel ABE28_007190 IPR007920 Protein of unknown function UPF0223 ABE28_007190 IPR023324 BH2638-like superfamily ABE28_007200 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ABE28_007200 IPR017926 Glutamine amidotransferase ABE28_007200 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ABE28_007200 IPR017459 Glycosyl transferase family 3, N-terminal domain ABE28_007200 IPR029062 Class I glutamine amidotransferase-like ABE28_007200 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain ABE28_007200 IPR000312 Glycosyl transferase, family 3 ABE28_007200 IPR005940 Anthranilate phosphoribosyl transferase ABE28_007205 IPR005940 Anthranilate phosphoribosyl transferase ABE28_007205 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ABE28_007205 IPR000312 Glycosyl transferase, family 3 ABE28_007205 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ABE28_007205 IPR017459 Glycosyl transferase family 3, N-terminal domain ABE28_007210 IPR013798 Indole-3-glycerol phosphate synthase ABE28_007210 IPR013785 Aldolase-type TIM barrel ABE28_007210 IPR001468 Indole-3-glycerol phosphate synthase, conserved site ABE28_007210 IPR011060 Ribulose-phosphate binding barrel ABE28_007215 IPR011060 Ribulose-phosphate binding barrel ABE28_007215 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) ABE28_007215 IPR013785 Aldolase-type TIM barrel ABE28_007220 IPR006653 Tryptophan synthase, beta chain, conserved site ABE28_007220 IPR006654 Tryptophan synthase, beta chain ABE28_007220 IPR023026 Tryptophan synthase beta chain/beta chain-like ABE28_007220 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_007220 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_007225 IPR013785 Aldolase-type TIM barrel ABE28_007225 IPR018204 Tryptophan synthase, alpha chain, active site ABE28_007225 IPR002028 Tryptophan synthase, alpha chain ABE28_007225 IPR011060 Ribulose-phosphate binding barrel ABE28_007230 IPR009403 Protein of unknown function UPF0637 ABE28_007240 IPR000760 Inositol monophosphatase-like ABE28_007240 IPR020550 Inositol monophosphatase, conserved site ABE28_007240 IPR020583 Inositol monophosphatase, metal-binding site ABE28_007245 IPR035211 Protein of unknown function DUF5325 ABE28_007255 IPR025620 YlaH-like protein ABE28_007270 IPR019241 Protein of unknown function DUF2197 ABE28_007275 IPR014247 Sporulation lipoprotein YhcN/YlaJ ABE28_007275 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_007280 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007280 IPR003714 PhoH-like protein ABE28_007280 IPR002716 PIN domain ABE28_007280 IPR029060 PIN-like domain superfamily ABE28_007290 IPR009983 Uncharacterised protein family UPF0358 ABE28_007290 IPR036270 UPF0358 superfamily ABE28_007295 IPR016185 Pre-ATP-grasp domain superfamily ABE28_007295 IPR011054 Rudiment single hybrid motif ABE28_007295 IPR000891 Pyruvate carboxyltransferase ABE28_007295 IPR011053 Single hybrid motif ABE28_007295 IPR005930 Pyruvate carboxylase ABE28_007295 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ABE28_007295 IPR003379 Carboxylase, conserved domain ABE28_007295 IPR000089 Biotin/lipoyl attachment ABE28_007295 IPR005482 Biotin carboxylase, C-terminal ABE28_007295 IPR011764 Biotin carboxylation domain ABE28_007295 IPR005481 Biotin carboxylase-like, N-terminal domain ABE28_007295 IPR011761 ATP-grasp fold ABE28_007295 IPR013785 Aldolase-type TIM barrel ABE28_007300 IPR003780 COX15/CtaA family ABE28_007300 IPR023755 Heme A synthase, type 1 ABE28_007305 IPR000537 UbiA prenyltransferase family ABE28_007305 IPR030470 UbiA prenyltransferase conserved site ABE28_007305 IPR006369 Protohaem IX farnesyltransferase ABE28_007310 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily ABE28_007310 IPR008972 Cupredoxin ABE28_007310 IPR014222 Cytochrome c oxidase, subunit II ABE28_007310 IPR036909 Cytochrome c-like domain superfamily ABE28_007310 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ABE28_007310 IPR001505 Copper centre Cu(A) ABE28_007310 IPR009056 Cytochrome c-like domain ABE28_007310 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain ABE28_007315 IPR036927 Cytochrome c oxidase-like, subunit I superfamily ABE28_007315 IPR014241 Cytochrome c oxidase, subunit I bacterial type ABE28_007315 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site ABE28_007315 IPR023616 Cytochrome c oxidase-like, subunit I domain ABE28_007315 IPR000883 Cytochrome c oxidase subunit I ABE28_007320 IPR024791 Cytochrome c oxidase subunit III ABE28_007320 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ABE28_007320 IPR033946 Ubiquinol oxidase subunit III domain ABE28_007320 IPR035973 Cytochrome c oxidase subunit III-like superfamily ABE28_007320 IPR000298 Cytochrome c oxidase subunit III-like ABE28_007325 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes ABE28_007325 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae ABE28_007330 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ABE28_007330 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG ABE28_007340 IPR014967 Uncharacterised protein family, YugN-like ABE28_007340 IPR036491 YugN-like superfamily ABE28_007345 IPR035940 CAP superfamily ABE28_007345 IPR029410 CAP-associated domain ABE28_007345 IPR014044 CAP domain ABE28_007360 IPR025613 YlbE-like protein ABE28_007370 IPR023378 YheA/YmcA-like domain superfamily ABE28_007370 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_007380 IPR016979 Protein of unknown function DUF2129 ABE28_007395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007395 IPR004398 RNA methyltransferase, RsmD ABE28_007400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_007400 IPR001980 Phosphopantetheine adenylyltransferase ABE28_007400 IPR004821 Cytidyltransferase-like domain ABE28_007405 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ABE28_007405 IPR014226 Sporulation integral membrane protein YlbJ ABE28_007410 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_007410 IPR001423 Lysophospholipase patatin, conserved site ABE28_007410 IPR002641 Patatin-like phospholipase domain ABE28_007415 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_007415 IPR039381 Endopeptidase La, PDZ domain ABE28_007415 IPR027065 Lon protease ABE28_007415 IPR008269 Peptidase S16, Lon proteolytic domain ABE28_007415 IPR036034 PDZ superfamily ABE28_007415 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_007415 IPR001478 PDZ domain ABE28_007420 IPR036397 Ribonuclease H superfamily ABE28_007420 IPR012337 Ribonuclease H-like superfamily ABE28_007420 IPR038965 Transposase InsF-like ABE28_007420 IPR025948 HTH-like domain ABE28_007420 IPR001584 Integrase, catalytic core ABE28_007430 IPR008513 tRNA(Met) cytidine acetate ligase ABE28_007430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_007435 IPR003772 Large ribosomal RNA subunit accumulation protein YceD ABE28_007440 IPR011332 Zinc-binding ribosomal protein ABE28_007440 IPR002677 Ribosomal protein L32p ABE28_007445 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_007445 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_007445 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_007445 IPR029045 ClpP/crotonase-like domain superfamily ABE28_007450 IPR014243 Transcription factor, RsfA ABE28_007450 IPR009057 Homeobox-like domain superfamily ABE28_007450 IPR017930 Myb domain ABE28_007455 IPR016181 Acyl-CoA N-acyltransferase ABE28_007455 IPR000182 GNAT domain ABE28_007455 IPR017274 Putative N-acetyltransferase YlbP ABE28_007460 IPR013332 Ketopantoate reductase, N-terminal domain ABE28_007460 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_007460 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_007460 IPR003710 Ketopantoate reductase ApbA/PanE ABE28_007460 IPR036291 NAD(P)-binding domain superfamily ABE28_007460 IPR013752 Ketopantoate reductase, C-terminal domain ABE28_007470 IPR011199 Bacillithiol biosynthesis BshC ABE28_007475 IPR037914 SpoVT-AbrB domain superfamily ABE28_007475 IPR007159 SpoVT-AbrB domain ABE28_007475 IPR003444 Transcriptional regulator MraZ ABE28_007475 IPR035642 MraZ, N-terminal ABE28_007475 IPR035644 MraZ, C-terminal ABE28_007475 IPR038619 MraZ superfamily ABE28_007475 IPR020603 MraZ domain ABE28_007480 IPR002903 Ribosomal RNA small subunit methyltransferase H ABE28_007480 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007480 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily ABE28_007485 IPR011922 Cell division protein FtsL ABE28_007485 IPR007060 Septum formation initiator FtsL/DivIC ABE28_007495 IPR005543 PASTA domain ABE28_007495 IPR012338 Beta-lactamase/transpeptidase-like ABE28_007495 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ABE28_007495 IPR005311 Penicillin-binding protein, dimerisation domain ABE28_007495 IPR001460 Penicillin-binding protein, transpeptidase ABE28_007495 IPR011927 Stage V sporulation protein D ABE28_007500 IPR036565 Mur-like, catalytic domain superfamily ABE28_007500 IPR004101 Mur ligase, C-terminal ABE28_007500 IPR000713 Mur ligase, N-terminal catalytic domain ABE28_007500 IPR035911 MurE/MurF, N-terminal ABE28_007500 IPR013221 Mur ligase, central ABE28_007500 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase ABE28_007500 IPR036615 Mur ligase, C-terminal domain superfamily ABE28_007505 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site ABE28_007505 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase ABE28_007505 IPR000715 Glycosyl transferase, family 4 ABE28_007510 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase ABE28_007510 IPR004101 Mur ligase, C-terminal ABE28_007510 IPR013221 Mur ligase, central ABE28_007510 IPR036565 Mur-like, catalytic domain superfamily ABE28_007510 IPR036615 Mur ligase, C-terminal domain superfamily ABE28_007515 IPR013438 Sporulation stage V, protein E ABE28_007515 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ABE28_007515 IPR013437 Probable peptidoglycan glycosyltransferase FtsW ABE28_007515 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ABE28_007520 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal ABE28_007520 IPR016167 FAD-binding, type PCMH, subdomain 1 ABE28_007520 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_007520 IPR016166 FAD-binding domain, PCMH-type ABE28_007520 IPR006094 FAD linked oxidase, N-terminal ABE28_007520 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_007520 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase ABE28_007520 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily ABE28_007525 IPR013685 POTRA domain, FtsQ-type ABE28_007525 IPR034746 POTRA domain ABE28_007525 IPR026580 Cell division protein DivIB ABE28_007530 IPR020823 Cell division protein FtsA ABE28_007530 IPR003494 SHS2 domain inserted in FtsA ABE28_007535 IPR036525 Tubulin/FtsZ, GTPase domain superfamily ABE28_007535 IPR003008 Tubulin/FtsZ, GTPase domain ABE28_007535 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily ABE28_007535 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain ABE28_007535 IPR008280 Tubulin/FtsZ, C-terminal ABE28_007535 IPR024757 Cell division protein FtsZ, C-terminal ABE28_007535 IPR020805 Cell division protein FtsZ, conserved site ABE28_007535 IPR000158 Cell division protein FtsZ ABE28_007540 IPR005081 Sigma-E processing peptidase SpoIIGA ABE28_007545 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007545 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007545 IPR013325 RNA polymerase sigma factor, region 2 ABE28_007545 IPR007627 RNA polymerase sigma-70 region 2 ABE28_007545 IPR014200 RNA polymerase sigma-E type ABE28_007545 IPR014284 RNA polymerase sigma-70 like domain ABE28_007545 IPR000943 RNA polymerase sigma-70 ABE28_007545 IPR007630 RNA polymerase sigma-70 region 4 ABE28_007550 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007550 IPR014284 RNA polymerase sigma-70 like domain ABE28_007550 IPR014212 RNA polymerase sigma-G type ABE28_007550 IPR000943 RNA polymerase sigma-70 ABE28_007550 IPR007627 RNA polymerase sigma-70 region 2 ABE28_007550 IPR007624 RNA polymerase sigma-70 region 3 ABE28_007550 IPR007630 RNA polymerase sigma-70 region 4 ABE28_007550 IPR013325 RNA polymerase sigma factor, region 2 ABE28_007550 IPR014322 RNA polymerase sigma-B/F/G type ABE28_007555 IPR011033 PRC-barrel-like superfamily ABE28_007555 IPR014238 Sporulation protein YlmC/YmxH ABE28_007555 IPR027275 PRC-barrel domain ABE28_007565 IPR029066 PLP-binding barrel ABE28_007565 IPR001608 Alanine racemase, N-terminal ABE28_007565 IPR011078 Pyridoxal phosphate homeostasis protein ABE28_007570 IPR038594 SepF-like superfamily ABE28_007570 IPR007561 Cell division protein SepF/SepF-related ABE28_007570 IPR023052 Cell division protein SepF ABE28_007575 IPR003425 CCB3/YggT ABE28_007580 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_007580 IPR036986 RNA-binding S4 domain superfamily ABE28_007580 IPR040591 YlmH, putative RNA-binding domain ABE28_007580 IPR002942 RNA-binding S4 domain ABE28_007585 IPR019933 DivIVA domain ABE28_007585 IPR007793 DivIVA family ABE28_007590 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ABE28_007590 IPR023585 Isoleucine-tRNA ligase, type 1 ABE28_007590 IPR002301 Isoleucine-tRNA ligase ABE28_007590 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ABE28_007590 IPR010663 Zinc finger, FPG/IleRS-type ABE28_007590 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain ABE28_007590 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_007590 IPR002300 Aminoacyl-tRNA synthetase, class Ia ABE28_007590 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_007590 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_007595 IPR001872 Peptidase A8, signal peptidase II ABE28_007600 IPR002942 RNA-binding S4 domain ABE28_007600 IPR036986 RNA-binding S4 domain superfamily ABE28_007600 IPR006225 Pseudouridine synthase, RluC/RluD ABE28_007600 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site ABE28_007600 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_007600 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_007605 IPR029057 Phosphoribosyltransferase-like ABE28_007605 IPR000836 Phosphoribosyltransferase domain ABE28_007605 IPR023050 Bifunctional protein PyrR ABE28_007610 IPR006042 Xanthine/uracil permease ABE28_007610 IPR006043 Xanthine/uracil/vitamin C permease ABE28_007610 IPR029935 Uracil permease ABE28_007615 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain ABE28_007615 IPR002082 Aspartate carbamoyltransferase ABE28_007615 IPR006130 Aspartate/ornithine carbamoyltransferase ABE28_007615 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding ABE28_007615 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily ABE28_007620 IPR002195 Dihydroorotase, conserved site ABE28_007620 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_007620 IPR006680 Amidohydrolase-related ABE28_007620 IPR004722 Dihydroorotase ABE28_007620 IPR032466 Metal-dependent hydrolase ABE28_007625 IPR006274 Carbamoyl-phosphate synthase, small subunit ABE28_007625 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain ABE28_007625 IPR017926 Glutamine amidotransferase ABE28_007625 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily ABE28_007625 IPR029062 Class I glutamine amidotransferase-like ABE28_007625 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain ABE28_007630 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain ABE28_007630 IPR011607 Methylglyoxal synthase-like domain ABE28_007630 IPR016185 Pre-ATP-grasp domain superfamily ABE28_007630 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain ABE28_007630 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_007630 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ABE28_007630 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily ABE28_007630 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain ABE28_007630 IPR006275 Carbamoyl-phosphate synthase, large subunit ABE28_007630 IPR011761 ATP-grasp fold ABE28_007635 IPR017938 Riboflavin synthase-like beta-barrel ABE28_007635 IPR000951 Phthalate dioxygenase reductase ABE28_007635 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_007635 IPR017927 FAD-binding domain, ferredoxin reductase-type ABE28_007635 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily ABE28_007635 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit ABE28_007635 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain ABE28_007635 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit ABE28_007640 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 ABE28_007640 IPR024920 Dihydroorotate dehydrogenase, class 1 ABE28_007640 IPR005720 Dihydroorotate dehydrogenase domain ABE28_007640 IPR013785 Aldolase-type TIM barrel ABE28_007640 IPR001295 Dihydroorotate dehydrogenase, conserved site ABE28_007640 IPR033888 Dihydroorotate dehydrogenase, class 1B ABE28_007645 IPR018089 Orotidine 5'-phosphate decarboxylase, active site ABE28_007645 IPR011060 Ribulose-phosphate binding barrel ABE28_007645 IPR001754 Orotidine 5'-phosphate decarboxylase domain ABE28_007645 IPR013785 Aldolase-type TIM barrel ABE28_007645 IPR014732 Orotidine 5'-phosphate decarboxylase ABE28_007650 IPR029057 Phosphoribosyltransferase-like ABE28_007650 IPR023031 Orotate phosphoribosyltransferase ABE28_007650 IPR004467 Orotate phosphoribosyl transferase domain ABE28_007650 IPR000836 Phosphoribosyltransferase domain ABE28_007660 IPR036412 HAD-like superfamily ABE28_007660 IPR008250 P-type ATPase, A domain superfamily ABE28_007660 IPR004014 Cation-transporting P-type ATPase, N-terminal ABE28_007660 IPR006068 Cation-transporting P-type ATPase, C-terminal ABE28_007660 IPR023299 P-type ATPase, cytoplasmic domain N ABE28_007660 IPR023214 HAD superfamily ABE28_007660 IPR018303 P-type ATPase, phosphorylation site ABE28_007660 IPR001757 P-type ATPase ABE28_007660 IPR023298 P-type ATPase, transmembrane domain superfamily ABE28_007660 IPR005782 P-type ATPase, subfamily IIA, SERCA-type ABE28_007665 IPR013527 YicC-like, N-terminal ABE28_007665 IPR013551 Domain of unknown function DUF1732 ABE28_007665 IPR005229 Conserved hypothetical protein CHP00255 ABE28_007670 IPR007169 Extracellular matrix regulatory protein A ABE28_007675 IPR020590 Guanylate kinase, conserved site ABE28_007675 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007675 IPR008144 Guanylate kinase-like domain ABE28_007675 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABE28_007675 IPR017665 Guanylate kinase ABE28_007680 IPR006110 RNA polymerase, subunit omega/K/RPB6 ABE28_007680 IPR012293 RNA polymerase subunit, RPB6/omega ABE28_007680 IPR036161 RPB6/omega subunit-like superfamily ABE28_007680 IPR003716 DNA-directed RNA polymerase, omega subunit ABE28_007685 IPR036551 Flavin prenyltransferase-like ABE28_007685 IPR003382 Flavoprotein ABE28_007685 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal ABE28_007685 IPR035929 CoaB-like superfamily ABE28_007685 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC ABE28_007690 IPR006935 Helicase/UvrB, N-terminal ABE28_007690 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_007690 IPR041236 Primosomal protein N, C-terminal domain ABE28_007690 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily ABE28_007690 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain ABE28_007690 IPR041222 Primosomal protein N', 3' DNA-binding domain ABE28_007690 IPR005259 Primosomal protein N' ABE28_007690 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007690 IPR001650 Helicase, C-terminal ABE28_007695 IPR036821 Peptide deformylase superfamily ABE28_007695 IPR023635 Peptide deformylase ABE28_007700 IPR005794 Methionyl-tRNA formyltransferase ABE28_007700 IPR005793 Formyl transferase, C-terminal ABE28_007700 IPR037022 Formyl transferase, C-terminal domain superfamily ABE28_007700 IPR036477 Formyl transferase, N-terminal domain superfamily ABE28_007700 IPR002376 Formyl transferase, N-terminal ABE28_007700 IPR011034 Formyl transferase-like, C-terminal domain superfamily ABE28_007700 IPR001555 Phosphoribosylglycinamide formyltransferase, active site ABE28_007700 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain ABE28_007705 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site ABE28_007705 IPR006027 NusB/RsmB/TIM44 ABE28_007705 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 IPR004573 rRNA small subunit methyltransferase B ABE28_007705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007705 IPR035926 NusB-like superfamily ABE28_007705 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type ABE28_007710 IPR007197 Radical SAM ABE28_007710 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr ABE28_007710 IPR027492 Dual-specificity RNA methyltransferase RlmN ABE28_007710 IPR040072 Methyltransferase (Class A) ABE28_007710 IPR013785 Aldolase-type TIM barrel ABE28_007715 IPR036457 PPM-type phosphatase domain superfamily ABE28_007715 IPR001932 PPM-type phosphatase domain ABE28_007715 IPR015655 Protein phosphatase 2C family ABE28_007720 IPR008271 Serine/threonine-protein kinase, active site ABE28_007720 IPR011009 Protein kinase-like domain superfamily ABE28_007720 IPR005543 PASTA domain ABE28_007720 IPR000719 Protein kinase domain ABE28_007720 IPR017441 Protein kinase, ATP binding site ABE28_007725 IPR010914 RsgA GTPase domain ABE28_007725 IPR004881 Ribosome biogenesis GTPase RsgA ABE28_007725 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal ABE28_007725 IPR012340 Nucleic acid-binding, OB-fold ABE28_007725 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain ABE28_007725 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007730 IPR011060 Ribulose-phosphate binding barrel ABE28_007730 IPR000056 Ribulose-phosphate 3-epimerase-like ABE28_007730 IPR026019 Ribulose-phosphate 3-epimerase ABE28_007730 IPR013785 Aldolase-type TIM barrel ABE28_007735 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily ABE28_007735 IPR007371 Thiamin pyrophosphokinase, catalytic domain ABE28_007735 IPR006282 Thiamin pyrophosphokinase ABE28_007735 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily ABE28_007735 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain ABE28_007740 IPR012609 Sporulation stage V, protein M ABE28_007745 IPR034704 L28p-like ABE28_007745 IPR026569 Ribosomal protein L28/L24 ABE28_007745 IPR037147 Ribosomal protein L28/L24 superfamily ABE28_007745 IPR001383 Ribosomal protein L28 ABE28_007750 IPR005531 Alkaline shock protein Asp23 ABE28_007755 IPR019986 DAK2 domain-containing protein YloV ABE28_007755 IPR033470 Uncharacterised protein, DhaK domain ABE28_007755 IPR036117 DhaL domain superfamily ABE28_007755 IPR004007 DhaL domain ABE28_007760 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit ABE28_007760 IPR005131 Serine dehydratase beta chain ABE28_007760 IPR029009 Allosteric substrate binding domain superfamily ABE28_007760 IPR002912 ACT domain ABE28_007765 IPR004642 Serine dehydratase, alpha subunit ABE28_007765 IPR005130 Serine dehydratase-like, alpha subunit ABE28_007770 IPR033454 RecG, wedge domain ABE28_007770 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007770 IPR012340 Nucleic acid-binding, OB-fold ABE28_007770 IPR001650 Helicase, C-terminal ABE28_007770 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_007770 IPR011545 DEAD/DEAH box helicase domain ABE28_007770 IPR004609 ATP-dependent DNA helicase RecG ABE28_007775 IPR036390 Winged helix DNA-binding domain superfamily ABE28_007775 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007775 IPR017275 Transcription factor FapR ABE28_007775 IPR002539 MaoC-like dehydratase domain ABE28_007775 IPR029069 HotDog domain superfamily ABE28_007775 IPR013196 Helix-turn-helix, type 11 ABE28_007780 IPR003664 Fatty acid synthesis PlsX protein ABE28_007780 IPR012281 Phospholipid biosynthesis protein, PlsX-like ABE28_007785 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_007785 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ABE28_007785 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type ABE28_007785 IPR024925 Malonyl CoA-acyl carrier protein transacylase ABE28_007785 IPR014043 Acyl transferase ABE28_007785 IPR001227 Acyl transferase domain superfamily ABE28_007790 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 IPR036291 NAD(P)-binding domain superfamily ABE28_007790 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_007795 IPR036736 ACP-like superfamily ABE28_007795 IPR006162 Phosphopantetheine attachment site ABE28_007795 IPR009081 Phosphopantetheine binding ACP domain ABE28_007795 IPR003231 Acyl carrier protein (ACP) ABE28_007800 IPR000999 Ribonuclease III domain ABE28_007800 IPR014720 Double-stranded RNA-binding domain ABE28_007800 IPR011907 Ribonuclease III ABE28_007800 IPR036389 Ribonuclease III, endonuclease domain superfamily ABE28_007805 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007805 IPR003395 RecF/RecN/SMC, N-terminal ABE28_007805 IPR024704 Structural maintenance of chromosomes protein ABE28_007805 IPR010935 SMCs flexible hinge ABE28_007805 IPR036277 SMCs flexible hinge superfamily ABE28_007805 IPR011890 Structural maintenance of chromosomes protein, prokaryotic ABE28_007810 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ABE28_007810 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ABE28_007810 IPR013822 Signal recognition particle SRP54, helical bundle ABE28_007810 IPR004390 Signal-recognition particle receptor FtsY ABE28_007810 IPR003593 AAA+ ATPase domain ABE28_007810 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007810 IPR036225 SRP/SRP receptor, N-terminal ABE28_007820 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like ABE28_007820 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007820 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007825 IPR013822 Signal recognition particle SRP54, helical bundle ABE28_007825 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily ABE28_007825 IPR004125 Signal recognition particle, SRP54 subunit, M-domain ABE28_007825 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007825 IPR003593 AAA+ ATPase domain ABE28_007825 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ABE28_007825 IPR022941 Signal recognition particle, SRP54 subunit ABE28_007825 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily ABE28_007825 IPR004780 Signal recognition particle protein ABE28_007830 IPR023803 Ribosomal protein S16 domain superfamily ABE28_007830 IPR000307 Ribosomal protein S16 ABE28_007835 IPR020627 Uncharacterised protein family UPF0109 ABE28_007835 IPR009019 K homology domain superfamily, prokaryotic type ABE28_007835 IPR015946 K homology domain-like, alpha/beta ABE28_007845 IPR002676 RimM, N-terminal ABE28_007845 IPR027275 PRC-barrel domain ABE28_007845 IPR011961 16S rRNA processing protein RimM ABE28_007845 IPR036976 RimM, N-terminal domain superfamily ABE28_007845 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_007845 IPR011033 PRC-barrel-like superfamily ABE28_007850 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain ABE28_007850 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_007850 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal ABE28_007850 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria ABE28_007850 IPR029028 Alpha/beta knot methyltransferases ABE28_007855 IPR038657 Ribosomal protein L19 superfamily ABE28_007855 IPR001857 Ribosomal protein L19 ABE28_007855 IPR018257 Ribosomal protein L19, conserved site ABE28_007855 IPR008991 Translation protein SH3-like domain superfamily ABE28_007860 IPR036286 LexA/Signal peptidase-like superfamily ABE28_007860 IPR019533 Peptidase S26 ABE28_007860 IPR000223 Peptidase S26A, signal peptidase I ABE28_007860 IPR019758 Peptidase S26A, signal peptidase I, conserved site ABE28_007860 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ABE28_007860 IPR019756 Peptidase S26A, signal peptidase I, serine active site ABE28_007865 IPR019991 GTP-binding protein, ribosome biogenesis ABE28_007865 IPR006073 GTP binding domain ABE28_007865 IPR016478 GTPase, MTG1 ABE28_007865 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain ABE28_007865 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily ABE28_007865 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007870 IPR036397 Ribonuclease H superfamily ABE28_007870 IPR012337 Ribonuclease H-like superfamily ABE28_007870 IPR024567 Ribonuclease HII/HIII domain ABE28_007870 IPR001352 Ribonuclease HII/HIII ABE28_007870 IPR022898 Ribonuclease HII ABE28_007880 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_007880 IPR006135 Type III secretion system substrate exporter ABE28_007880 IPR006136 Flagellar biosynthetic protein FlhB ABE28_007885 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type ABE28_007885 IPR013815 ATP-grasp fold, subdomain 1 ABE28_007885 IPR011761 ATP-grasp fold ABE28_007885 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ABE28_007885 IPR016102 Succinyl-CoA synthetase-like ABE28_007885 IPR005809 Succinate--CoA synthetase, beta subunit ABE28_007890 IPR005811 ATP-citrate lyase/succinyl-CoA ligase ABE28_007890 IPR036291 NAD(P)-binding domain superfamily ABE28_007890 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ABE28_007890 IPR016102 Succinyl-CoA synthetase-like ABE28_007890 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ABE28_007890 IPR005810 Succinyl-CoA ligase, alpha subunit ABE28_007890 IPR003781 CoA-binding ABE28_007895 IPR003488 DNA recombination-mediator protein A ABE28_007900 IPR013497 DNA topoisomerase, type IA, central ABE28_007900 IPR034149 DNA topoisomerase 1, TOPRIM domain ABE28_007900 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABE28_007900 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABE28_007900 IPR006171 TOPRIM domain ABE28_007900 IPR028612 DNA topoisomerase I, type IA ABE28_007900 IPR005733 DNA topoisomerase I, bacterial-type ABE28_007900 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABE28_007900 IPR023405 DNA topoisomerase, type IA, core domain ABE28_007900 IPR003602 DNA topoisomerase, type IA, DNA-binding domain ABE28_007900 IPR003601 DNA topoisomerase, type IA, domain 2 ABE28_007900 IPR000380 DNA topoisomerase, type IA ABE28_007900 IPR013498 DNA topoisomerase, type IA, zn finger ABE28_007900 IPR023406 DNA topoisomerase, type IA, active site ABE28_007905 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related ABE28_007905 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO ABE28_007905 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007905 IPR020595 MnmG-related, conserved site ABE28_007910 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_007910 IPR002104 Integrase, catalytic domain ABE28_007910 IPR011931 Tyrosine recombinase XerC ABE28_007910 IPR023009 Tyrosine recombinase XerC/XerD ABE28_007910 IPR010998 Integrase/recombinase, N-terminal ABE28_007910 IPR004107 Integrase, SAM-like, N-terminal ABE28_007910 IPR013762 Integrase-like, catalytic domain superfamily ABE28_007915 IPR001353 Proteasome, subunit alpha/beta ABE28_007915 IPR023333 Proteasome B-type subunit ABE28_007915 IPR022281 ATP-dependent protease, HslV subunit ABE28_007915 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_007920 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007920 IPR003593 AAA+ ATPase domain ABE28_007920 IPR019489 Clp ATPase, C-terminal ABE28_007920 IPR004491 Heat shock protein HslU ABE28_007920 IPR003959 ATPase, AAA-type, core ABE28_007925 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal ABE28_007925 IPR036390 Winged helix DNA-binding domain superfamily ABE28_007925 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal ABE28_007925 IPR029016 GAF-like domain superfamily ABE28_007925 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY ABE28_007925 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007930 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_007930 IPR019776 Flagellar basal body rod protein, conserved site ABE28_007930 IPR006300 Flagellar basal-body rod protein FlgB ABE28_007935 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_007935 IPR006299 Flagellar basal-body rod protein FlgC ABE28_007935 IPR019776 Flagellar basal body rod protein, conserved site ABE28_007935 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_007940 IPR001624 Flagellar hook-basal body complex protein FliE ABE28_007945 IPR013556 Flagellar M-ring C-terminal ABE28_007945 IPR000067 Flagellar M-ring protein FliF ABE28_007945 IPR006182 Secretory protein YscJ/FliF ABE28_007950 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ABE28_007950 IPR032779 Flagellar motor switch protein FliG, middle domain ABE28_007950 IPR000090 Flagellar motor switch protein FliG ABE28_007950 IPR011002 Flagellar motor switch protein FliG, alpha-helical ABE28_007950 IPR023087 Flagellar motor switch protein FliG, C-terminal ABE28_007955 IPR012842 Type III secretion system HrpE/YscL ABE28_007955 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ABE28_007960 IPR040627 T3SS EscN ATPase, C-terminal ABE28_007960 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ABE28_007960 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007960 IPR022425 Flagellar export ATPase FliI, clade 2 ABE28_007960 IPR003593 AAA+ ATPase domain ABE28_007960 IPR000225 Armadillo ABE28_007960 IPR005714 ATPase, type III secretion system, FliI/YscN ABE28_007960 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ABE28_007960 IPR032463 ATPase, type III secretion system, FliI ABE28_007960 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ABE28_007965 IPR012823 Flagellar export FliJ ABE28_007980 IPR005648 Flagellar hook capping protein ABE28_007990 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_007990 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_007990 IPR037058 Flagellar hook protein FlgE superfamily ABE28_007990 IPR019776 Flagellar basal body rod protein, conserved site ABE28_007990 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABE28_007990 IPR011491 Flagellar hook protein FlgE ABE28_007990 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_007995 IPR009384 Swarming motility protein SwrD-like ABE28_008000 IPR005503 Flagellar basal body-associated protein FliL ABE28_008005 IPR001689 Flagellar motor switch protein FliM ABE28_008005 IPR036429 SpoA-like superfamily ABE28_008005 IPR001543 Surface presentation of antigen (SpoA) ABE28_008005 IPR028976 CheC-like superfamily ABE28_008010 IPR007597 CheC-like protein ABE28_008010 IPR028976 CheC-like superfamily ABE28_008010 IPR036429 SpoA-like superfamily ABE28_008010 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb ABE28_008010 IPR001543 Surface presentation of antigen (SpoA) ABE28_008010 IPR012826 Flagellar motor switch FliN ABE28_008015 IPR001789 Signal transduction response regulator, receiver domain ABE28_008015 IPR011006 CheY-like superfamily ABE28_008020 IPR022781 Flagellar biosynthesis protein, FliO ABE28_008025 IPR005837 Flagellar transport protein FliP ABE28_008025 IPR005838 Type III secretion system inner membrane P protein ABE28_008030 IPR002191 Bacterial export protein family 3 ABE28_008030 IPR006305 Flagellar biosynthesis protein FliQ ABE28_008035 IPR002010 Type III secretion system inner membrane R protein ABE28_008035 IPR006303 Flagellar biosynthesis protein FliR ABE28_008040 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_008040 IPR006135 Type III secretion system substrate exporter ABE28_008040 IPR006136 Flagellar biosynthetic protein FlhB ABE28_008045 IPR042196 FHIPEP, domain 4 ABE28_008045 IPR042194 FHIPEP, domain 1 ABE28_008045 IPR042193 FHIPEP, domain 3 ABE28_008045 IPR006301 Flagellar biosynthesis protein FlhA ABE28_008045 IPR001712 Type III secretion system FHIPEP ABE28_008045 IPR025505 FHIPEP conserved site ABE28_008050 IPR020006 Flagellar biosynthesis protein FlhF ABE28_008050 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008050 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain ABE28_008055 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008055 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABE28_008055 IPR025501 ATP binding protein MinD ABE28_008060 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type ABE28_008060 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase ABE28_008060 IPR011006 CheY-like superfamily ABE28_008060 IPR035909 Methylesterase CheB, C-terminal ABE28_008060 IPR001789 Signal transduction response regulator, receiver domain ABE28_008065 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain ABE28_008065 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_008065 IPR036641 HPT domain superfamily ABE28_008065 IPR005467 Histidine kinase domain ABE28_008065 IPR004105 Histidine kinase CheA-like, homodimeric domain ABE28_008065 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily ABE28_008065 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding ABE28_008065 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_008065 IPR036061 CheW-like domain superfamily ABE28_008065 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily ABE28_008065 IPR002545 CheW-like domain ABE28_008065 IPR035891 CheY-binding domain of CheA ABE28_008065 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008070 IPR002545 CheW-like domain ABE28_008070 IPR039315 Chemotaxis protein CheW ABE28_008070 IPR036061 CheW-like domain superfamily ABE28_008075 IPR028976 CheC-like superfamily ABE28_008075 IPR007597 CheC-like protein ABE28_008080 IPR038592 CheD-like superfamily ABE28_008080 IPR005659 Chemoreceptor glutamine deamidase CheD ABE28_008080 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABE28_008085 IPR007624 RNA polymerase sigma-70 region 3 ABE28_008085 IPR007627 RNA polymerase sigma-70 region 2 ABE28_008085 IPR000943 RNA polymerase sigma-70 ABE28_008085 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_008085 IPR013325 RNA polymerase sigma factor, region 2 ABE28_008085 IPR014284 RNA polymerase sigma-70 like domain ABE28_008085 IPR012845 RNA polymerase sigma factor, FliA/WhiG ABE28_008085 IPR007630 RNA polymerase sigma-70 region 4 ABE28_008095 IPR018130 Ribosomal protein S2, conserved site ABE28_008095 IPR001865 Ribosomal protein S2 ABE28_008095 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ABE28_008095 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid ABE28_008100 IPR009060 UBA-like superfamily ABE28_008100 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation ABE28_008100 IPR001816 Translation elongation factor EFTs/EF1B ABE28_008100 IPR036402 Elongation factor Ts, dimerisation domain superfamily ABE28_008100 IPR018101 Translation elongation factor Ts, conserved site ABE28_008105 IPR015963 Uridylate kinase, bacteria ABE28_008105 IPR011817 Uridylate kinase ABE28_008105 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_008105 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008110 IPR036191 RRF superfamily ABE28_008110 IPR023584 Ribosome recycling factor domain ABE28_008110 IPR002661 Ribosome recycling factor ABE28_008115 IPR036424 Decaprenyl diphosphate synthase-like superfamily ABE28_008115 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site ABE28_008115 IPR001441 Decaprenyl diphosphate synthase-like ABE28_008120 IPR000374 Phosphatidate cytidylyltransferase ABE28_008125 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABE28_008125 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal ABE28_008125 IPR026877 DXP reductoisomerase C-terminal domain ABE28_008125 IPR036169 DXP reductoisomerase, C-terminal domain superfamily ABE28_008125 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal ABE28_008125 IPR036291 NAD(P)-binding domain superfamily ABE28_008130 IPR008915 Peptidase M50 ABE28_008130 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase ABE28_008130 IPR036034 PDZ superfamily ABE28_008130 IPR001478 PDZ domain ABE28_008135 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain ABE28_008135 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily ABE28_008135 IPR004154 Anticodon-binding ABE28_008135 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_008135 IPR033730 Prokaryote proline-tRNA ligase core domain ABE28_008135 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 ABE28_008135 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type ABE28_008135 IPR002316 Proline-tRNA ligase, class IIa ABE28_008135 IPR036621 Anticodon-binding domain superfamily ABE28_008135 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ABE28_008140 IPR012337 Ribonuclease H-like superfamily ABE28_008140 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ABE28_008140 IPR040982 DNA polymerase III alpha subunit finger domain ABE28_008140 IPR024754 DNA polymerase III polC-like, N-terminal domain II ABE28_008140 IPR028112 DNA polymerase III polC-type, N-terminal domain I ABE28_008140 IPR029460 DNA polymerase, helix-hairpin-helix motif ABE28_008140 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ABE28_008140 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_008140 IPR012340 Nucleic acid-binding, OB-fold ABE28_008140 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_008140 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type ABE28_008140 IPR036397 Ribonuclease H superfamily ABE28_008140 IPR004013 PHP domain ABE28_008145 IPR003728 Ribosome maturation factor RimP ABE28_008145 IPR028998 Ribosome maturation factor RimP, C-terminal ABE28_008145 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ABE28_008145 IPR035956 RimP, N-terminal domain superfamily ABE28_008145 IPR028989 Ribosome maturation factor RimP, N-terminal ABE28_008150 IPR009019 K homology domain superfamily, prokaryotic type ABE28_008150 IPR010213 Transcription termination factor NusA ABE28_008150 IPR013735 Transcription factor NusA, N-terminal ABE28_008150 IPR003029 S1 domain ABE28_008150 IPR022967 RNA-binding domain, S1 ABE28_008150 IPR036555 NusA, N-terminal domain superfamily ABE28_008150 IPR030842 Transcription termination/antitermination protein NusA, bacterial ABE28_008150 IPR004087 K Homology domain ABE28_008150 IPR012340 Nucleic acid-binding, OB-fold ABE28_008150 IPR015946 K homology domain-like, alpha/beta ABE28_008150 IPR025249 KH domain, NusA-like ABE28_008155 IPR007393 Domain of unknown function DUF448 ABE28_008155 IPR035931 YlxR-like superfamily ABE28_008155 IPR037465 Uncharacterized protein YlxR ABE28_008160 IPR004037 Ribosomal protein L7Ae conserved site ABE28_008160 IPR039109 Ribosomal protein L30/YlxQ ABE28_008160 IPR029064 50S ribosomal protein L30e-like ABE28_008160 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 ABE28_008160 IPR039107 Ribosomal protein YlxQ ABE28_008165 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_008165 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABE28_008165 IPR006847 Translation initiation factor IF-2, N-terminal ABE28_008165 IPR023115 Translation initiation factor IF- 2, domain 3 ABE28_008165 IPR015760 Translation initiation factor IF- 2 ABE28_008165 IPR000178 Translation initiation factor aIF-2, bacterial-like ABE28_008165 IPR000795 Transcription factor, GTP-binding domain ABE28_008165 IPR005225 Small GTP-binding protein domain ABE28_008165 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008170 IPR007546 Protein of unknown function DUF503 ABE28_008170 IPR036746 TT1725-like superfamily ABE28_008175 IPR000238 Ribosome-binding factor A ABE28_008175 IPR020053 Ribosome-binding factor A, conserved site ABE28_008175 IPR023799 Ribosome-binding factor A domain superfamily ABE28_008175 IPR015946 K homology domain-like, alpha/beta ABE28_008180 IPR032819 tRNA pseudouridylate synthase B, C-terminal ABE28_008180 IPR014780 tRNA pseudouridine synthase II, TruB ABE28_008180 IPR002501 Pseudouridine synthase II, N-terminal ABE28_008180 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_008185 IPR023465 Riboflavin kinase domain superfamily ABE28_008185 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic ABE28_008185 IPR015864 FAD synthetase ABE28_008185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_008185 IPR004821 Cytidyltransferase-like domain ABE28_008185 IPR002606 Riboflavin kinase, bacterial ABE28_008185 IPR023468 Riboflavin kinase ABE28_008190 IPR005290 Ribosomal protein S15, bacterial-type ABE28_008190 IPR000589 Ribosomal protein S15 ABE28_008190 IPR009068 S15/NS1, RNA-binding ABE28_008195 IPR012162 Polyribonucleotide nucleotidyltransferase ABE28_008195 IPR015847 Exoribonuclease, phosphorolytic domain 2 ABE28_008195 IPR036345 Exoribonuclease, PH domain 2 superfamily ABE28_008195 IPR004087 K Homology domain ABE28_008195 IPR004088 K Homology domain, type 1 ABE28_008195 IPR012340 Nucleic acid-binding, OB-fold ABE28_008195 IPR027408 PNPase/RNase PH domain superfamily ABE28_008195 IPR022967 RNA-binding domain, S1 ABE28_008195 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_008195 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain ABE28_008195 IPR001247 Exoribonuclease, phosphorolytic domain 1 ABE28_008195 IPR036612 K Homology domain, type 1 superfamily ABE28_008195 IPR003029 S1 domain ABE28_008200 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY ABE28_008200 IPR002509 NodB homology domain ABE28_008200 IPR010916 TonB box, conserved site ABE28_008200 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_008205 IPR007863 Peptidase M16, C-terminal ABE28_008205 IPR001431 Peptidase M16, zinc-binding site ABE28_008205 IPR011765 Peptidase M16, N-terminal ABE28_008205 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ABE28_008210 IPR014238 Sporulation protein YlmC/YmxH ABE28_008210 IPR011033 PRC-barrel-like superfamily ABE28_008210 IPR027275 PRC-barrel domain ABE28_008215 IPR014215 Dipicolinic acid synthetase subunit A ABE28_008215 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABE28_008215 IPR036291 NAD(P)-binding domain superfamily ABE28_008215 IPR031629 Dipicolinate synthase subunit A, N-terminal ABE28_008220 IPR014214 Dipicolinic acid synthetase, subunit B ABE28_008220 IPR003382 Flavoprotein ABE28_008220 IPR036551 Flavin prenyltransferase-like ABE28_008225 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site ABE28_008225 IPR036291 NAD(P)-binding domain superfamily ABE28_008225 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type ABE28_008225 IPR012080 Aspartate-semialdehyde dehydrogenase ABE28_008225 IPR000534 Semialdehyde dehydrogenase, NAD-binding ABE28_008225 IPR012280 Semialdehyde dehydrogenase, dimerisation domain ABE28_008230 IPR002912 ACT domain ABE28_008230 IPR027795 CASTOR, ACT domain ABE28_008230 IPR018042 Aspartate kinase, conserved site ABE28_008230 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008230 IPR001341 Aspartate kinase ABE28_008230 IPR005260 Aspartate kinase, monofunctional class ABE28_008230 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_008235 IPR020624 Schiff base-forming aldolase, conserved site ABE28_008235 IPR002220 DapA-like ABE28_008235 IPR020625 Schiff base-forming aldolase, active site ABE28_008235 IPR013785 Aldolase-type TIM barrel ABE28_008235 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA ABE28_008240 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABE28_008240 IPR041636 Ribonuclease J, C-terminal ABE28_008240 IPR042173 Ribonuclease J, domain 2 ABE28_008240 IPR001279 Metallo-beta-lactamase ABE28_008240 IPR030854 Ribonuclease J, bacteria ABE28_008240 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008240 IPR004613 Ribonuclease J ABE28_008245 IPR029045 ClpP/crotonase-like domain superfamily ABE28_008245 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_008255 IPR003593 AAA+ ATPase domain ABE28_008255 IPR041027 FtsK alpha domain ABE28_008255 IPR002543 FtsK domain ABE28_008255 IPR018541 FtsK gamma domain ABE28_008255 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008255 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008255 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008265 IPR011663 UbiC transcription regulator-associated ABE28_008265 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008265 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008265 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008265 IPR000524 Transcription regulator HTH, GntR ABE28_008290 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ABE28_008290 IPR007863 Peptidase M16, C-terminal ABE28_008295 IPR007863 Peptidase M16, C-terminal ABE28_008295 IPR011765 Peptidase M16, N-terminal ABE28_008295 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ABE28_008300 IPR036291 NAD(P)-binding domain superfamily ABE28_008300 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008305 IPR024702 Uncharacterised conserved protein YmfJ ABE28_008305 IPR038292 YmfJ/YflH superfamily ABE28_008305 IPR021637 Protein of unknown function DUF3243 ABE28_008310 IPR016784 Uncharacterised protein UCP021288 with ACT domain ABE28_008310 IPR024514 Domain of unknown function DUF3388 ABE28_008310 IPR002912 ACT domain ABE28_008315 IPR025194 Domain of unknown function DUF4115 ABE28_008315 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_008320 IPR000462 CDP-alcohol phosphatidyltransferase ABE28_008320 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase ABE28_008325 IPR001453 MoaB/Mog domain ABE28_008325 IPR036425 MoaB/Mog-like domain superfamily ABE28_008325 IPR008135 Competence-induced protein CinA ABE28_008325 IPR041424 CinA, KH domain ABE28_008325 IPR036653 CinA-like, C-terminal ABE28_008325 IPR008136 CinA, C-terminal ABE28_008330 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008330 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface ABE28_008330 IPR020584 DNA recombination/repair protein RecA, conserved site ABE28_008330 IPR023400 DNA recombination and repair protein RecA, C-terminal ABE28_008330 IPR003593 AAA+ ATPase domain ABE28_008330 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain ABE28_008330 IPR013765 DNA recombination and repair protein RecA ABE28_008335 IPR003607 HD/PDEase domain ABE28_008335 IPR006674 HD domain ABE28_008335 IPR017705 Ribonuclease Y ABE28_008335 IPR022711 Ribonuclease Y, N-terminal ABE28_008335 IPR036612 K Homology domain, type 1 superfamily ABE28_008335 IPR006675 HDIG domain ABE28_008335 IPR004087 K Homology domain ABE28_008335 IPR004088 K Homology domain, type 1 ABE28_008340 IPR005235 Metallophosphoesterase, YmdB-like ABE28_008340 IPR029052 Metallo-dependent phosphatase-like ABE28_008345 IPR007347 Sporulation stage V, protein S ABE28_008345 IPR036882 Alba-like domain superfamily ABE28_008355 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_008355 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain ABE28_008355 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain ABE28_008355 IPR029061 Thiamin diphosphate-binding fold ABE28_008355 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II ABE28_008355 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal ABE28_008355 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit ABE28_008360 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_008360 IPR029061 Thiamin diphosphate-binding fold ABE28_008365 IPR020843 Polyketide synthase, enoylreductase domain ABE28_008365 IPR036291 NAD(P)-binding domain superfamily ABE28_008365 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_008365 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_008365 IPR004627 L-threonine 3-dehydrogenase ABE28_008365 IPR011032 GroES-like superfamily ABE28_008365 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_008370 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB ABE28_008370 IPR005839 Methylthiotransferase ABE28_008370 IPR002792 TRAM domain ABE28_008370 IPR006638 Elp3/MiaB/NifB ABE28_008370 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_008370 IPR007197 Radical SAM ABE28_008370 IPR020612 Methylthiotransferase, conserved site ABE28_008370 IPR013848 Methylthiotransferase, N-terminal ABE28_008370 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABE28_008375 IPR016783 Biofilm formation YmcA ABE28_008375 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_008375 IPR023378 YheA/YmcA-like domain superfamily ABE28_008380 IPR018901 Spore coat protein CotE ABE28_008385 IPR007861 DNA mismatch repair protein MutS, clamp ABE28_008385 IPR017261 DNA mismatch repair protein MutS/MSH ABE28_008385 IPR000432 DNA mismatch repair protein MutS, C-terminal ABE28_008385 IPR007860 DNA mismatch repair protein MutS, connector domain ABE28_008385 IPR005748 DNA mismatch repair protein MutS ABE28_008385 IPR036678 MutS, connector domain superfamily ABE28_008385 IPR007696 DNA mismatch repair protein MutS, core ABE28_008385 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_008385 IPR016151 DNA mismatch repair protein MutS, N-terminal ABE28_008385 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008385 IPR007695 DNA mismatch repair protein MutS-like, N-terminal ABE28_008390 IPR014762 DNA mismatch repair, conserved site ABE28_008390 IPR042120 MutL, C-terminal domain, dimerisation subdomain ABE28_008390 IPR042121 MutL, C-terminal domain, regulatory subdomain ABE28_008390 IPR037198 MutL, C-terminal domain superfamily ABE28_008390 IPR014790 MutL, C-terminal, dimerisation ABE28_008390 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms ABE28_008390 IPR002099 DNA mismatch repair protein family, N-terminal ABE28_008390 IPR013507 DNA mismatch repair protein, S5 domain 2-like ABE28_008390 IPR020667 DNA mismatch repair protein, MutL ABE28_008390 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_008390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008390 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_008395 IPR004566 Pantothenate kinase ABE28_008395 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008395 IPR006083 Phosphoribulokinase/uridine kinase ABE28_008410 IPR011650 Peptidase M20, dimerisation domain ABE28_008410 IPR010158 Amidase, carbamoylase-type ABE28_008410 IPR002933 Peptidase M20 ABE28_008410 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008415 IPR011650 Peptidase M20, dimerisation domain ABE28_008415 IPR002933 Peptidase M20 ABE28_008415 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008415 IPR017439 Amidohydrolase ABE28_008420 IPR000485 AsnC-type HTH domain ABE28_008420 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_008420 IPR000524 Transcription regulator HTH, GntR ABE28_008420 IPR011711 GntR, C-terminal ABE28_008420 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008420 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008425 IPR034589 D-mannonate dehydratase-like ABE28_008425 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site ABE28_008425 IPR034593 Mandelate racemase-like ABE28_008425 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_008425 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_008425 IPR029065 Enolase C-terminal domain-like ABE28_008425 IPR029017 Enolase-like, N-terminal ABE28_008425 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_008430 IPR011701 Major facilitator superfamily ABE28_008430 IPR000849 Sugar phosphate transporter ABE28_008430 IPR036259 MFS transporter superfamily ABE28_008430 IPR020846 Major facilitator superfamily domain ABE28_008435 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABE28_008435 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABE28_008445 IPR029039 Flavoprotein-like superfamily ABE28_008445 IPR023048 NADH-azoreductase, FMN-dependent ABE28_008445 IPR003680 Flavodoxin-like fold ABE28_008450 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_008450 IPR000944 Transcription regulator Rrf2-type ABE28_008450 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008450 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008455 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_008455 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 IPR036291 NAD(P)-binding domain superfamily ABE28_008470 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_008470 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_008480 IPR013096 Cupin 2, conserved barrel ABE28_008480 IPR011051 RmlC-like cupin domain superfamily ABE28_008480 IPR014710 RmlC-like jelly roll fold ABE28_008485 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008485 IPR002938 FAD-binding domain ABE28_008490 IPR032466 Metal-dependent hydrolase ABE28_008490 IPR001559 Phosphotriesterase ABE28_008510 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal ABE28_008510 IPR029058 Alpha/Beta hydrolase fold ABE28_008510 IPR005674 CocE/Serine esterase ABE28_008510 IPR008979 Galactose-binding-like domain superfamily ABE28_008510 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain ABE28_008515 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008515 IPR001279 Metallo-beta-lactamase ABE28_008520 IPR004165 Coenzyme A transferase family I ABE28_008520 IPR004163 Coenzyme A transferase binding site ABE28_008520 IPR037171 NagB/RpiA transferase-like ABE28_008520 IPR012792 3-oxoacid CoA-transferase, subunit A ABE28_008525 IPR037171 NagB/RpiA transferase-like ABE28_008525 IPR004165 Coenzyme A transferase family I ABE28_008525 IPR004164 Coenzyme A transferase active site ABE28_008525 IPR012791 3-oxoacid CoA-transferase, subunit B ABE28_008535 IPR011701 Major facilitator superfamily ABE28_008535 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family ABE28_008535 IPR005829 Sugar transporter, conserved site ABE28_008535 IPR020846 Major facilitator superfamily domain ABE28_008535 IPR036259 MFS transporter superfamily ABE28_008540 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008540 IPR002938 FAD-binding domain ABE28_008545 IPR013094 Alpha/beta hydrolase fold-3 ABE28_008545 IPR029058 Alpha/Beta hydrolase fold ABE28_008550 IPR000849 Sugar phosphate transporter ABE28_008550 IPR036259 MFS transporter superfamily ABE28_008550 IPR020846 Major facilitator superfamily domain ABE28_008550 IPR011701 Major facilitator superfamily ABE28_008555 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain ABE28_008555 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008555 IPR001279 Metallo-beta-lactamase ABE28_008555 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain ABE28_008555 IPR017782 Hydroxyacylglutathione hydrolase ABE28_008565 IPR011650 Peptidase M20, dimerisation domain ABE28_008565 IPR002933 Peptidase M20 ABE28_008565 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008565 IPR017439 Amidohydrolase ABE28_008570 IPR005115 Uncharacterised domain UPF0126 ABE28_008575 IPR016193 Cytidine deaminase-like ABE28_008575 IPR006262 Cytidine deaminase, homotetrameric ABE28_008575 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_008585 IPR001226 Flavodoxin, conserved site ABE28_008585 IPR008254 Flavodoxin/nitric oxide synthase ABE28_008585 IPR001094 Flavodoxin-like ABE28_008585 IPR010087 Flavodoxin, short chain ABE28_008585 IPR029039 Flavoprotein-like superfamily ABE28_008595 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_008595 IPR003709 Peptidase M15B ABE28_008600 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_008600 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_008600 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008600 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008600 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_008600 IPR005467 Histidine kinase domain ABE28_008605 IPR001789 Signal transduction response regulator, receiver domain ABE28_008605 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008605 IPR039420 Transcriptional regulatory protein WalR-like ABE28_008605 IPR011006 CheY-like superfamily ABE28_008605 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_008605 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_008615 IPR004813 Oligopeptide transporter, OPT superfamily ABE28_008615 IPR004814 Oligopeptide transporter OPT ABE28_008625 IPR025944 Sigma-54 interaction domain, conserved site ABE28_008625 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_008625 IPR013767 PAS fold ABE28_008625 IPR035965 PAS domain superfamily ABE28_008625 IPR000014 PAS domain ABE28_008625 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008625 IPR036291 NAD(P)-binding domain superfamily ABE28_008625 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_008625 IPR002197 DNA binding HTH domain, Fis-type ABE28_008625 IPR009057 Homeobox-like domain superfamily ABE28_008625 IPR003593 AAA+ ATPase domain ABE28_008625 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_008630 IPR018385 C4-dicarboxylate anaerobic carrier-like ABE28_008635 IPR032466 Metal-dependent hydrolase ABE28_008635 IPR006680 Amidohydrolase-related ABE28_008635 IPR033826 Isoaspartyl-dipeptidase ABE28_008635 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_008635 IPR010229 Peptidase M38, beta-aspartyl dipeptidase ABE28_008645 IPR029062 Class I glutamine amidotransferase-like ABE28_008645 IPR005320 Peptidase S51 ABE28_008645 IPR011811 Peptidase S51, cyanophycinase ABE28_008650 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_008650 IPR036291 NAD(P)-binding domain superfamily ABE28_008650 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_008650 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008660 IPR006426 Asparagine synthase, glutamine-hydrolyzing ABE28_008660 IPR001962 Asparagine synthase ABE28_008660 IPR033738 Asparagine synthase, N-terminal domain ABE28_008660 IPR017932 Glutamine amidotransferase type 2 domain ABE28_008660 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_008670 IPR013012 Phosphotransferase system, EIIB component, type 3 ABE28_008670 IPR036095 PTS system IIB component-like superfamily ABE28_008670 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_008675 IPR004501 Phosphotransferase system, EIIC component, type 3 ABE28_008675 IPR004796 Phosphotransferase system, cellobiose-type IIC component ABE28_008675 IPR003352 Phosphotransferase system, EIIC ABE28_008680 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily ABE28_008680 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit ABE28_008685 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ABE28_008685 IPR036291 NAD(P)-binding domain superfamily ABE28_008685 IPR019802 Glycoside hydrolase, family 4, conserved site ABE28_008685 IPR022616 Glycosyl hydrolase, family 4, C-terminal ABE28_008685 IPR001088 Glycoside hydrolase, family 4 ABE28_008690 IPR006879 Carbohydrate deacetylase YdjC-like ABE28_008690 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_008690 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria ABE28_008695 IPR023753 FAD/NAD(P)-binding domain ABE28_008695 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008700 IPR012440 Protein of unknown function DUF1641 ABE28_008715 IPR029151 Periplasmic sensor-like domain superfamily ABE28_008715 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB ABE28_008715 IPR039506 SpoOB, alpha-helical domain ABE28_008715 IPR033463 Single cache domain 3 ABE28_008715 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_008715 IPR000014 PAS domain ABE28_008715 IPR005467 Histidine kinase domain ABE28_008715 IPR035965 PAS domain superfamily ABE28_008715 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008715 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008720 IPR018022 IPP transferase ABE28_008720 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008720 IPR039657 Dimethylallyltransferase ABE28_008725 IPR010920 LSM domain superfamily ABE28_008725 IPR005001 RNA-binding protein Hfq ABE28_008730 IPR003593 AAA+ ATPase domain ABE28_008730 IPR041627 CbbX, AAA lid domain ABE28_008730 IPR014232 Sporulation stage V, protein K ABE28_008730 IPR003959 ATPase, AAA-type, core ABE28_008730 IPR000641 CbxX/CfxQ ABE28_008730 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008735 IPR005115 Uncharacterised domain UPF0126 ABE28_008740 IPR016496 GTPase HflX ABE28_008740 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008740 IPR042108 GTPase HflX, N-terminal domain superfamily ABE28_008740 IPR030394 HflX-type guanine nucleotide-binding (G) domain ABE28_008740 IPR025121 GTPase HflX, N-terminal ABE28_008740 IPR006073 GTP binding domain ABE28_008740 IPR032305 GTP-binding protein, middle domain ABE28_008745 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_008745 IPR009651 Putative methionine gamma-lyase ABE28_008745 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_008750 IPR009061 Putative DNA-binding domain superfamily ABE28_008750 IPR000551 MerR-type HTH domain ABE28_008755 IPR027303 Glutamine synthetase, glycine-rich site ABE28_008755 IPR027302 Glutamine synthetase, N-terminal conserved site ABE28_008755 IPR008147 Glutamine synthetase, beta-Grasp domain ABE28_008755 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain ABE28_008755 IPR036651 Glutamine synthetase, N-terminal domain superfamily ABE28_008755 IPR008146 Glutamine synthetase, catalytic domain ABE28_008755 IPR001637 Glutamine synthetase class-I, adenylation site ABE28_008755 IPR004809 Glutamine synthetase type I ABE28_008760 IPR004107 Integrase, SAM-like, N-terminal ABE28_008760 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_008760 IPR013762 Integrase-like, catalytic domain superfamily ABE28_008760 IPR002104 Integrase, catalytic domain ABE28_008760 IPR010998 Integrase/recombinase, N-terminal ABE28_008830 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_008830 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_008875 IPR011344 Single-stranded DNA-binding protein ABE28_008875 IPR012340 Nucleic acid-binding, OB-fold ABE28_008875 IPR000424 Primosome PriB/single-strand DNA-binding ABE28_009005 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain ABE28_009005 IPR036779 LysM domain superfamily ABE28_009005 IPR018392 LysM domain ABE28_009075 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_009075 IPR039561 Peptidase M15C ABE28_009125 IPR006343 DnaD domain ABE28_009125 IPR034829 DnaD-like domain superfamily ABE28_009155 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_009155 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009155 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_009155 IPR014284 RNA polymerase sigma-70 like domain ABE28_009170 IPR018597 Bacteriophage Tuc2009, YjcQ ABE28_009170 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009170 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009185 IPR012337 Ribonuclease H-like superfamily ABE28_009185 IPR036397 Ribonuclease H superfamily ABE28_009185 IPR001584 Integrase, catalytic core ABE28_009185 IPR025948 HTH-like domain ABE28_009185 IPR038965 Transposase InsF-like ABE28_009290 IPR004797 Competence protein ComEC/Rec2 ABE28_009290 IPR004477 ComEC/Rec2-related protein ABE28_009290 IPR035681 ComA-like, MBL domain ABE28_009290 IPR025405 Domain of unknown function DUF4131 ABE28_009290 IPR001279 Metallo-beta-lactamase ABE28_009290 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_009315 IPR003593 AAA+ ATPase domain ABE28_009315 IPR007692 DNA helicase, DnaB type ABE28_009315 IPR007694 DNA helicase, DnaB-like, C-terminal ABE28_009315 IPR007693 DNA helicase, DnaB-like, N-terminal ABE28_009315 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_009315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_009315 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ABE28_009355 IPR036397 Ribonuclease H superfamily ABE28_009355 IPR012337 Ribonuclease H-like superfamily ABE28_009355 IPR001584 Integrase, catalytic core ABE28_009355 IPR038965 Transposase InsF-like ABE28_009355 IPR025948 HTH-like domain ABE28_009395 IPR029756 MTH1187/YkoF-like ABE28_009395 IPR002767 Thiamine-binding protein ABE28_009410 IPR021354 Protein of unknown function DUF2975 ABE28_009415 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_009415 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_009420 IPR008535 Protein of unknown function DUF817 ABE28_009425 IPR033908 R2-like ligand binding oxidase ABE28_009425 IPR000358 Ribonucleotide reductase small subunit family ABE28_009425 IPR012348 Ribonucleotide reductase-like ABE28_009425 IPR009078 Ferritin-like superfamily ABE28_009435 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_009435 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009435 IPR039420 Transcriptional regulatory protein WalR-like ABE28_009435 IPR001789 Signal transduction response regulator, receiver domain ABE28_009435 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_009435 IPR011006 CheY-like superfamily ABE28_009440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_009440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_009440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_009440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009440 IPR005467 Histidine kinase domain ABE28_009440 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009455 IPR002933 Peptidase M20 ABE28_009455 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_009455 IPR017439 Amidohydrolase ABE28_009455 IPR017145 Aminobenzoyl-glutamate utilization protein B ABE28_009460 IPR002933 Peptidase M20 ABE28_009460 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_009460 IPR017439 Amidohydrolase ABE28_009460 IPR033845 p-Aminobenzoyl-glutamate hydrolase subunit A ABE28_009460 IPR011650 Peptidase M20, dimerisation domain ABE28_009465 IPR011540 AbgT, Proteobacteria ABE28_009465 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT ABE28_009480 IPR004761 Spore germination GerAB ABE28_009485 IPR038750 Uncharacterized protein YczE/YyaS-like ABE28_009510 IPR000700 PAS-associated, C-terminal ABE28_009510 IPR004090 Chemotaxis methyl-accepting receptor ABE28_009510 IPR000014 PAS domain ABE28_009510 IPR035965 PAS domain superfamily ABE28_009510 IPR013655 PAS fold-3 ABE28_009510 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_009510 IPR001610 PAC motif ABE28_009535 IPR002053 Glycoside hydrolase, family 25 ABE28_009535 IPR003646 SH3-like domain, bacterial-type ABE28_009535 IPR018077 Glycoside hydrolase, family 25 subgroup ABE28_009535 IPR017853 Glycoside hydrolase superfamily ABE28_009535 IPR008270 Glycoside hydrolase, family 25, active site ABE28_009540 IPR022493 Integral membrane YkoY ABE28_009540 IPR005496 Integral membrane protein TerC ABE28_009540 IPR036259 MFS transporter superfamily ABE28_009555 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ABE28_009555 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain ABE28_009560 IPR003838 ABC transporter permease protein domain ABE28_009560 IPR025857 MacB-like periplasmic core domain ABE28_009565 IPR003593 AAA+ ATPase domain ABE28_009565 IPR003439 ABC transporter-like ABE28_009565 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_009570 IPR005467 Histidine kinase domain ABE28_009570 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009570 IPR003660 HAMP domain ABE28_009570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_009570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_009575 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009575 IPR011006 CheY-like superfamily ABE28_009575 IPR001789 Signal transduction response regulator, receiver domain ABE28_009575 IPR039420 Transcriptional regulatory protein WalR-like ABE28_009575 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_009580 IPR004761 Spore germination GerAB ABE28_009585 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_009590 IPR008844 Spore germination GerAC ABE28_009595 IPR001789 Signal transduction response regulator, receiver domain ABE28_009595 IPR011006 CheY-like superfamily ABE28_009595 IPR000792 Transcription regulator LuxR, C-terminal ABE28_009595 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_009600 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 IPR036291 NAD(P)-binding domain superfamily ABE28_009600 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_009605 IPR036291 NAD(P)-binding domain superfamily ABE28_009605 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_009605 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 IPR029058 Alpha/Beta hydrolase fold ABE28_009630 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_009630 IPR036291 NAD(P)-binding domain superfamily ABE28_009630 IPR000073 Alpha/beta hydrolase fold-1 ABE28_009635 IPR009061 Putative DNA-binding domain superfamily ABE28_009635 IPR000551 MerR-type HTH domain ABE28_009650 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_009650 IPR037478 YwkD-like domain ABE28_009650 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_009650 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_009655 IPR001322 Lamin tail domain ABE28_009655 IPR029052 Metallo-dependent phosphatase-like ABE28_009655 IPR036415 Lamin tail domain superfamily ABE28_009655 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_009655 IPR011401 Phosphoesterase, YvnB ABE28_009660 IPR016181 Acyl-CoA N-acyltransferase ABE28_009660 IPR000182 GNAT domain ABE28_009665 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_009665 IPR011008 Dimeric alpha-beta barrel ABE28_009680 IPR027469 Cation efflux transmembrane domain superfamily ABE28_009680 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ABE28_009680 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_009680 IPR002524 Cation efflux protein ABE28_009690 IPR001647 DNA-binding HTH domain, TetR-type ABE28_009690 IPR009057 Homeobox-like domain superfamily ABE28_009690 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_009700 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_009700 IPR036005 Creatinase/aminopeptidase-like ABE28_009700 IPR014335 Ectoine utilization protein EutD ABE28_009700 IPR000587 Creatinase, N-terminal ABE28_009700 IPR000994 Peptidase M24 ABE28_009705 IPR002821 Hydantoinase A/oxoprolinase ABE28_009705 IPR008040 Hydantoinaseoxoprolinase, N-terminal ABE28_009730 IPR004501 Phosphotransferase system, EIIC component, type 3 ABE28_009730 IPR003352 Phosphotransferase system, EIIC ABE28_009730 IPR004796 Phosphotransferase system, cellobiose-type IIC component ABE28_009745 IPR036095 PTS system IIB component-like superfamily ABE28_009745 IPR013012 Phosphotransferase system, EIIB component, type 3 ABE28_009745 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_009750 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily ABE28_009750 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit ABE28_009755 IPR029039 Flavoprotein-like superfamily ABE28_009755 IPR003680 Flavodoxin-like fold ABE28_009755 IPR023048 NADH-azoreductase, FMN-dependent ABE28_009760 IPR009403 Protein of unknown function UPF0637 ABE28_009765 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009765 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009765 IPR000944 Transcription regulator Rrf2-type ABE28_009765 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_009765 IPR010242 Transcription factor HTH, IscR ABE28_009770 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha ABE28_009770 IPR001017 Dehydrogenase, E1 component ABE28_009770 IPR029061 Thiamin diphosphate-binding fold ABE28_009775 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009775 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_009775 IPR033248 Transketolase, C-terminal domain ABE28_009775 IPR029061 Thiamin diphosphate-binding fold ABE28_009780 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009780 IPR023753 FAD/NAD(P)-binding domain ABE28_009785 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site ABE28_009785 IPR005982 Thioredoxin reductase ABE28_009785 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009785 IPR023753 FAD/NAD(P)-binding domain ABE28_009790 IPR029039 Flavoprotein-like superfamily ABE28_009790 IPR023048 NADH-azoreductase, FMN-dependent ABE28_009790 IPR003680 Flavodoxin-like fold ABE28_009795 IPR036291 NAD(P)-binding domain superfamily ABE28_009795 IPR016040 NAD(P)-binding domain ABE28_009800 IPR002577 Helix-turn-helix, HxlR type ABE28_009800 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009800 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009820 IPR015590 Aldehyde dehydrogenase domain ABE28_009820 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_009820 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_009820 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_009820 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_009830 IPR004104 Oxidoreductase, C-terminal ABE28_009830 IPR000683 Oxidoreductase, N-terminal ABE28_009830 IPR036291 NAD(P)-binding domain superfamily ABE28_009835 IPR018043 Sodium:galactoside symporter, conserved site ABE28_009835 IPR039672 Lactose permease-like ABE28_009835 IPR036259 MFS transporter superfamily ABE28_009835 IPR001927 Sodium:galactoside symporter ABE28_009840 IPR018225 Transaldolase, active site ABE28_009840 IPR022999 Transaldolase type 3B, putative ABE28_009840 IPR013785 Aldolase-type TIM barrel ABE28_009840 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial ABE28_009840 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase ABE28_009840 IPR001585 Transaldolase/Fructose-6-phosphate aldolase ABE28_009855 IPR014825 DNA alkylation repair enzyme ABE28_009855 IPR021133 HEAT, type 2 ABE28_009855 IPR016024 Armadillo-type fold ABE28_009860 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ABE28_009860 IPR036878 Glucose permease domain IIB ABE28_009860 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_009860 IPR003352 Phosphotransferase system, EIIC ABE28_009860 IPR011296 Phosphotransferase system, trehalose-specific IIBC component ABE28_009860 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_009860 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_009865 IPR017853 Glycoside hydrolase superfamily ABE28_009865 IPR032091 Maltogenic Amylase, C-terminal ABE28_009865 IPR012769 Trehalose-6-phosphate hydrolase ABE28_009865 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_009865 IPR013780 Glycosyl hydrolase, all-beta ABE28_009870 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009870 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009870 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_009870 IPR011663 UbiC transcription regulator-associated ABE28_009870 IPR000524 Transcription regulator HTH, GntR ABE28_009870 IPR012770 Trehalose operon transcriptional repressor ABE28_009875 IPR000390 Small multidrug resistance protein family ABE28_009880 IPR000390 Small multidrug resistance protein family ABE28_009885 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal ABE28_009885 IPR001001 DNA polymerase III, beta sliding clamp ABE28_009885 IPR022637 DNA polymerase III, beta sliding clamp, central ABE28_009885 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal ABE28_009900 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009900 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009900 IPR005467 Histidine kinase domain ABE28_009900 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_009900 IPR013767 PAS fold ABE28_009900 IPR035965 PAS domain superfamily ABE28_009900 IPR000014 PAS domain ABE28_009900 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_009900 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_009905 IPR007730 Sporulation-like domain ABE28_009905 IPR036680 Sporulation-like domain superfamily ABE28_009905 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ABE28_009915 IPR006197 Peptidase S24, LexA-like ABE28_009915 IPR039418 LexA-like ABE28_009915 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009915 IPR036286 LexA/Signal peptidase-like superfamily ABE28_009915 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009915 IPR006199 LexA repressor, DNA-binding domain ABE28_009915 IPR006200 Transcription regulator LexA ABE28_009915 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_009940 IPR018392 LysM domain ABE28_009940 IPR036779 LysM domain superfamily ABE28_009940 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain ABE28_009945 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009945 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_009945 IPR006197 Peptidase S24, LexA-like ABE28_009945 IPR006199 LexA repressor, DNA-binding domain ABE28_009945 IPR036286 LexA/Signal peptidase-like superfamily ABE28_009945 IPR039418 LexA-like ABE28_009945 IPR006200 Transcription regulator LexA ABE28_009945 IPR011991 ArsR-like helix-turn-helix domain ABE28_009945 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009950 IPR036779 LysM domain superfamily ABE28_009950 IPR018392 LysM domain ABE28_009950 IPR022887 Cell division suppressor protein, YneA ABE28_009955 IPR006119 Resolvase, N-terminal catalytic domain ABE28_009955 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily ABE28_009960 IPR009242 Protein of unknown function DUF896 ABE28_009965 IPR005478 Transketolase, bacterial-like ABE28_009965 IPR020826 Transketolase binding site ABE28_009965 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_009965 IPR033248 Transketolase, C-terminal domain ABE28_009965 IPR033247 Transketolase family ABE28_009965 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009965 IPR029061 Thiamin diphosphate-binding fold ABE28_009965 IPR005474 Transketolase, N-terminal ABE28_009970 IPR038449 SirA superfamily ABE28_009970 IPR019683 Sporulation inhibitor of replication protein SirA ABE28_009980 IPR010432 RDD ABE28_009995 IPR013766 Thioredoxin domain ABE28_009995 IPR005746 Thioredoxin ABE28_009995 IPR017937 Thioredoxin, conserved site ABE28_009995 IPR036249 Thioredoxin-like superfamily ABE28_010000 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ABE28_010000 IPR013785 Aldolase-type TIM barrel ABE28_010005 IPR032808 DoxX family ABE28_010010 IPR037126 PdaC/RsiV-like superfamily ABE28_010010 IPR021729 Domain of unknown function DUF3298 ABE28_010010 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_010010 IPR002509 NodB homology domain ABE28_010010 IPR025303 Deacetylase PdaC ABE28_010010 IPR017219 Peptidoglycan GlcNAc deacetylase ABE28_010025 IPR003834 Cytochrome C biogenesis protein, transmembrane domain ABE28_010030 IPR011006 CheY-like superfamily ABE28_010030 IPR001789 Signal transduction response regulator, receiver domain ABE28_010035 IPR031306 CcdC protein ABE28_010040 IPR007272 Sulphur transport domain ABE28_010045 IPR001455 TusA-like domain ABE28_010045 IPR036868 TusA-like domain superfamily ABE28_010055 IPR020203 Uncharacterised protein family, YneK ABE28_010060 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_010060 IPR029052 Metallo-dependent phosphatase-like ABE28_010060 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain ABE28_010060 IPR004593 Nuclease SbcCD subunit D ABE28_010060 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ABE28_010065 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010065 IPR038729 Rad50/SbcC-type AAA domain ABE28_010080 IPR020845 AMP-binding, conserved site ABE28_010080 IPR000873 AMP-dependent synthetase/ligase ABE28_010080 IPR042099 AMP-dependent synthetase-like superfamily ABE28_010080 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010100 IPR020615 Thiolase, acyl-enzyme intermediate active site ABE28_010100 IPR002155 Thiolase ABE28_010100 IPR016039 Thiolase-like ABE28_010100 IPR020610 Thiolase, active site ABE28_010100 IPR020617 Thiolase, C-terminal ABE28_010100 IPR020613 Thiolase, conserved site ABE28_010100 IPR020616 Thiolase, N-terminal ABE28_010110 IPR042099 AMP-dependent synthetase-like superfamily ABE28_010110 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010110 IPR020845 AMP-binding, conserved site ABE28_010110 IPR000873 AMP-dependent synthetase/ligase ABE28_010120 IPR028082 Periplasmic binding protein-like I ABE28_010120 IPR006377 Catabolite control protein A ABE28_010120 IPR000843 LacI-type HTH domain ABE28_010120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_010125 IPR013785 Aldolase-type TIM barrel ABE28_010125 IPR028581 Deoxyribose-phosphate aldolase type I ABE28_010125 IPR011343 Deoxyribose-phosphate aldolase ABE28_010125 IPR002915 DeoC/FbaB/ lacD aldolase ABE28_010130 IPR020846 Major facilitator superfamily domain ABE28_010130 IPR005275 L-fucose permease FucP ABE28_010130 IPR011701 Major facilitator superfamily ABE28_010130 IPR036259 MFS transporter superfamily ABE28_010140 IPR029056 Ribokinase-like ABE28_010140 IPR002139 Ribokinase/fructokinase ABE28_010140 IPR011611 Carbohydrate kinase PfkB ABE28_010140 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_010140 IPR011877 Ribokinase ABE28_010150 IPR027396 DsrEFH-like ABE28_010150 IPR032836 DsrE2-like family ABE28_010160 IPR036873 Rhodanese-like domain superfamily ABE28_010160 IPR001455 TusA-like domain ABE28_010160 IPR001763 Rhodanese-like domain ABE28_010160 IPR036868 TusA-like domain superfamily ABE28_010165 IPR036873 Rhodanese-like domain superfamily ABE28_010165 IPR001763 Rhodanese-like domain ABE28_010165 IPR001279 Metallo-beta-lactamase ABE28_010165 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_010170 IPR001455 TusA-like domain ABE28_010170 IPR036868 TusA-like domain superfamily ABE28_010175 IPR002781 Transmembrane protein TauE-like ABE28_010180 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_010180 IPR013096 Cupin 2, conserved barrel ABE28_010180 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_010180 IPR011051 RmlC-like cupin domain superfamily ABE28_010180 IPR014710 RmlC-like jelly roll fold ABE28_010185 IPR001123 Amino acid exporter protein, LeuE-type ABE28_010200 IPR029479 Nitroreductase ABE28_010200 IPR000415 Nitroreductase-like ABE28_010210 IPR003660 HAMP domain ABE28_010210 IPR033479 Double Cache domain 1 ABE28_010210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_010210 IPR029151 Periplasmic sensor-like domain superfamily ABE28_010210 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_010215 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010215 IPR003439 ABC transporter-like ABE28_010215 IPR025302 Domain of unknown function DUF4162 ABE28_010215 IPR003593 AAA+ ATPase domain ABE28_010215 IPR017871 ABC transporter, conserved site ABE28_010235 IPR012334 Pectin lyase fold ABE28_010235 IPR006626 Parallel beta-helix repeat ABE28_010235 IPR006633 Carbohydrate-binding/sugar hydrolysis domain ABE28_010235 IPR039448 Right handed beta helix domain ABE28_010235 IPR011050 Pectin lyase fold/virulence factor ABE28_010240 IPR011701 Major facilitator superfamily ABE28_010240 IPR020846 Major facilitator superfamily domain ABE28_010240 IPR005829 Sugar transporter, conserved site ABE28_010240 IPR036259 MFS transporter superfamily ABE28_010255 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010255 IPR000835 MarR-type HTH domain ABE28_010255 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010260 IPR020846 Major facilitator superfamily domain ABE28_010260 IPR036259 MFS transporter superfamily ABE28_010260 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_010260 IPR005829 Sugar transporter, conserved site ABE28_010260 IPR011701 Major facilitator superfamily ABE28_010270 IPR029787 Nucleotide cyclase ABE28_010270 IPR000160 GGDEF domain ABE28_010270 IPR033416 Periplasmic sensor domain CHASE7 ABE28_010290 IPR001789 Signal transduction response regulator, receiver domain ABE28_010290 IPR039420 Transcriptional regulatory protein WalR-like ABE28_010290 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010290 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_010290 IPR011006 CheY-like superfamily ABE28_010290 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_010295 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_010295 IPR003660 HAMP domain ABE28_010295 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_010295 IPR041328 ResE, histidine kinase sensor domain ABE28_010295 IPR013767 PAS fold ABE28_010295 IPR035965 PAS domain superfamily ABE28_010295 IPR000014 PAS domain ABE28_010295 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_010295 IPR005467 Histidine kinase domain ABE28_010295 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_010295 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010300 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain ABE28_010300 IPR025987 GW domain ABE28_010300 IPR038200 GW domain superfamily ABE28_010305 IPR038390 Metal-sensitive transcriptional repressor superfamily ABE28_010305 IPR003735 Metal-sensitive transcriptional repressor ABE28_010310 IPR017969 Heavy-metal-associated, conserved site ABE28_010310 IPR006122 Heavy metal-associated domain, copper ion-binding ABE28_010310 IPR006121 Heavy metal-associated domain, HMA ABE28_010310 IPR000428 Copper ion binding protein ABE28_010310 IPR036163 Heavy metal-associated domain superfamily ABE28_010315 IPR001757 P-type ATPase ABE28_010315 IPR023298 P-type ATPase, transmembrane domain superfamily ABE28_010315 IPR018303 P-type ATPase, phosphorylation site ABE28_010315 IPR036412 HAD-like superfamily ABE28_010315 IPR023214 HAD superfamily ABE28_010315 IPR036163 Heavy metal-associated domain superfamily ABE28_010315 IPR006121 Heavy metal-associated domain, HMA ABE28_010315 IPR008250 P-type ATPase, A domain superfamily ABE28_010315 IPR023299 P-type ATPase, cytoplasmic domain N ABE28_010315 IPR027256 P-type ATPase, subfamily IB ABE28_010315 IPR017969 Heavy-metal-associated, conserved site ABE28_010315 IPR006122 Heavy metal-associated domain, copper ion-binding ABE28_010330 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010330 IPR017871 ABC transporter, conserved site ABE28_010330 IPR003593 AAA+ ATPase domain ABE28_010330 IPR003439 ABC transporter-like ABE28_010330 IPR025302 Domain of unknown function DUF4162 ABE28_010335 IPR032688 ABC-2 family transporter protein ABE28_010340 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB ABE28_010340 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ABE28_010340 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ABE28_010345 IPR009057 Homeobox-like domain superfamily ABE28_010345 IPR001647 DNA-binding HTH domain, TetR-type ABE28_010345 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_010350 IPR002818 DJ-1/PfpI ABE28_010350 IPR029062 Class I glutamine amidotransferase-like ABE28_010365 IPR018946 Alkaline phosphatase D-related ABE28_010365 IPR032093 Phospholipase D, N-terminal ABE28_010365 IPR038607 PhoD-like superfamily ABE28_010365 IPR008963 Purple acid phosphatase-like, N-terminal ABE28_010370 IPR003369 Sec-independent protein translocase protein TatA/B/E ABE28_010370 IPR006312 Sec-independent protein translocase protein TatA/E ABE28_010375 IPR019820 Sec-independent periplasmic protein translocase, conserved site ABE28_010375 IPR002033 Sec-independent periplasmic protein translocase TatC ABE28_010385 IPR004841 Amino acid permease/ SLC12A domain ABE28_010385 IPR004840 Amino acid permease, conserved site ABE28_010385 IPR011265 GABA permease ABE28_010395 IPR000399 TPP-binding enzyme, conserved site ABE28_010395 IPR012000 Thiamine pyrophosphate enzyme, central domain ABE28_010395 IPR017820 Sulphoacetaldehyde acetyltransferase ABE28_010395 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_010395 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_010395 IPR029061 Thiamin diphosphate-binding fold ABE28_010395 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_010400 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_010400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_010400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_010400 IPR005814 Aminotransferase class-III ABE28_010405 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 ABE28_010405 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ABE28_010405 IPR024078 Putative deacetylase LmbE-like domain superfamily ABE28_010410 IPR018383 Uncharacterised protein family UPF0324, prokaryote ABE28_010415 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010415 IPR014178 Fatty acid response transcription factor FadR ABE28_010415 IPR000524 Transcription regulator HTH, GntR ABE28_010415 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_010415 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010415 IPR028374 FadR, C-terminal domain ABE28_010420 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_010420 IPR036291 NAD(P)-binding domain superfamily ABE28_010420 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_010420 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010425 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_010425 IPR000835 MarR-type HTH domain ABE28_010425 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010425 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010430 IPR029061 Thiamin diphosphate-binding fold ABE28_010430 IPR001017 Dehydrogenase, E1 component ABE28_010435 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_010435 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_010435 IPR029061 Thiamin diphosphate-binding fold ABE28_010435 IPR033248 Transketolase, C-terminal domain ABE28_010440 IPR007530 Aminoglycoside 6-adenylyltransferase ABE28_010445 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_010445 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_010445 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_010455 IPR006530 YD repeat ABE28_010455 IPR008979 Galactose-binding-like domain superfamily ABE28_010455 IPR022385 Rhs repeat-associated core ABE28_010455 IPR031325 RHS repeat ABE28_010480 IPR003719 Phenazine biosynthesis PhzF protein ABE28_010485 IPR014922 Domain of unknown function DUF1801 ABE28_010485 IPR016786 Uncharacterised protein YdeI, bacterial ABE28_010490 IPR000182 GNAT domain ABE28_010490 IPR016181 Acyl-CoA N-acyltransferase ABE28_010500 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_010500 IPR000086 NUDIX hydrolase domain ABE28_010510 IPR036259 MFS transporter superfamily ABE28_010510 IPR020846 Major facilitator superfamily domain ABE28_010510 IPR011701 Major facilitator superfamily ABE28_010515 IPR016166 FAD-binding domain, PCMH-type ABE28_010515 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_010515 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_010515 IPR016164 FAD-linked oxidase-like, C-terminal ABE28_010515 IPR006094 FAD linked oxidase, N-terminal ABE28_010525 IPR036190 Urocanase superfamily ABE28_010525 IPR035085 Urocanase, Rossmann-like domain ABE28_010525 IPR023636 Urocanase conserved site ABE28_010525 IPR038364 Urocanase, central domain superfamily ABE28_010525 IPR035401 Urocanase, C-terminal domain ABE28_010525 IPR023637 Urocanase ABE28_010525 IPR035400 Urocanase, N-terminal domain ABE28_010530 IPR005920 Imidazolonepropionase ABE28_010530 IPR006680 Amidohydrolase-related ABE28_010530 IPR032466 Metal-dependent hydrolase ABE28_010530 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_010535 IPR020846 Major facilitator superfamily domain ABE28_010535 IPR036259 MFS transporter superfamily ABE28_010535 IPR000849 Sugar phosphate transporter ABE28_010535 IPR011701 Major facilitator superfamily ABE28_010540 IPR036259 MFS transporter superfamily ABE28_010540 IPR020846 Major facilitator superfamily domain ABE28_010540 IPR005829 Sugar transporter, conserved site ABE28_010540 IPR005828 Major facilitator, sugar transporter-like ABE28_010545 IPR022313 Phenylalanine/histidine ammonia-lyases, active site ABE28_010545 IPR001106 Aromatic amino acid lyase ABE28_010545 IPR024083 Fumarase/histidase, N-terminal ABE28_010545 IPR008948 L-Aspartase-like ABE28_010545 IPR005921 Histidine ammonia-lyase ABE28_010550 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010550 IPR006281 Sarcosine oxidase, monomeric ABE28_010550 IPR006076 FAD dependent oxidoreductase ABE28_010555 IPR005501 LamB/YcsF/PxpA-like ABE28_010555 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_010560 IPR001046 NRAMP family ABE28_010565 IPR016938 Uncharacterised protein family UPF0317 ABE28_010565 IPR038021 Putative hydro-lyase ABE28_010565 IPR009906 D-glutamate cyclase ABE28_010570 IPR029000 Cyclophilin-like domain superfamily ABE28_010570 IPR010016 KipI family ABE28_010570 IPR003833 Carboxyltransferase domain, subdomain C and D ABE28_010575 IPR003778 Carboxyltransferase domain, subdomain A and B ABE28_010575 IPR029000 Cyclophilin-like domain superfamily ABE28_010580 IPR005471 Transcription regulator IclR, N-terminal ABE28_010580 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010580 IPR014757 Transcription regulator IclR, C-terminal ABE28_010580 IPR029016 GAF-like domain superfamily ABE28_010580 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010595 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010595 IPR000847 Transcription regulator HTH, LysR ABE28_010595 IPR005119 LysR, substrate-binding ABE28_010595 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010600 IPR006035 Ureohydrolase ABE28_010600 IPR005923 Formiminoglutamase ABE28_010600 IPR023696 Ureohydrolase domain superfamily ABE28_010605 IPR003738 SOS response associated peptidase (SRAP) ABE28_010605 IPR036590 SOS response associated peptidase-like ABE28_010615 IPR001463 Sodium:alanine symporter ABE28_010625 IPR017929 CobB/CobQ glutamine amidotransferase ABE28_010625 IPR029062 Class I glutamine amidotransferase-like ABE28_010625 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010625 IPR011698 CobB/CobQ-like glutamine amidotransferase ABE28_010625 IPR004459 Cobyric acid synthase CobQ ABE28_010625 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 ABE28_010625 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ABE28_010630 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ABE28_010630 IPR020816 Histone-like DNA-binding protein, conserved site ABE28_010630 IPR000119 Histone-like DNA-binding protein ABE28_010635 IPR017441 Protein kinase, ATP binding site ABE28_010635 IPR000719 Protein kinase domain ABE28_010635 IPR011009 Protein kinase-like domain superfamily ABE28_010640 IPR020879 N-acetylglucosamine-binding protein A ABE28_010640 IPR014756 Immunoglobulin E-set ABE28_010640 IPR004302 Cellulose/chitin-binding protein, N-terminal ABE28_010640 IPR041029 N-acetylglucosamine binding protein A domain 2 ABE28_010645 IPR016084 Haem oxygenase-like, multi-helical ABE28_010645 IPR027574 Thiaminase II ABE28_010645 IPR004305 Thiaminase-2/PQQC ABE28_010650 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted ABE28_010655 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010655 IPR003593 AAA+ ATPase domain ABE28_010655 IPR003439 ABC transporter-like ABE28_010655 IPR017871 ABC transporter, conserved site ABE28_010665 IPR013785 Aldolase-type TIM barrel ABE28_010665 IPR036206 Thiamin phosphate synthase superfamily ABE28_010665 IPR022998 Thiamine phosphate synthase/TenI ABE28_010670 IPR006076 FAD dependent oxidoreductase ABE28_010670 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010670 IPR012727 Glycine oxidase ThiO ABE28_010675 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_010675 IPR010035 ThiS, thiamine-biosynthesis ABE28_010675 IPR003749 Sulfur carrier ThiS/MoaD-like ABE28_010675 IPR008867 Thiazole synthase ABE28_010675 IPR033983 Thiazole synthase ThiG ABE28_010675 IPR013785 Aldolase-type TIM barrel ABE28_010675 IPR012675 Beta-grasp domain superfamily ABE28_010680 IPR013785 Aldolase-type TIM barrel ABE28_010680 IPR008867 Thiazole synthase ABE28_010680 IPR033983 Thiazole synthase ThiG ABE28_010685 IPR035985 Ubiquitin-activating enzyme ABE28_010685 IPR000594 THIF-type NAD/FAD binding fold ABE28_010690 IPR012614 Small acid-soluble spore protein, SspP ABE28_010700 IPR012613 Small acid-soluble spore protein, SspO ABE28_010705 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain ABE28_010705 IPR036008 Aconitase, iron-sulfur domain ABE28_010705 IPR018136 Aconitase family, 4Fe-4S cluster binding site ABE28_010705 IPR006249 Aconitase/Iron-responsive element-binding protein 2 ABE28_010705 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ABE28_010705 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ABE28_010705 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ABE28_010710 IPR036249 Thioredoxin-like superfamily ABE28_010710 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ABE28_010710 IPR013766 Thioredoxin domain ABE28_010715 IPR012612 Small acid-soluble spore protein, SspN ABE28_010720 IPR017524 Small acid-soluble spore protein, thioredoxin-like ABE28_010725 IPR029069 HotDog domain superfamily ABE28_010725 IPR006683 Thioesterase domain ABE28_010725 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family ABE28_010735 IPR000361 FeS cluster biogenesis ABE28_010735 IPR008326 Uncharacterised conserved protein UCP034852 ABE28_010735 IPR035903 HesB-like domain superfamily ABE28_010740 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_010740 IPR015376 Zinc ribbon, NADH pyrophosphatase ABE28_010740 IPR000086 NUDIX hydrolase domain ABE28_010740 IPR020084 NUDIX hydrolase, conserved site ABE28_010740 IPR022925 NADH pyrophosphatase NudC ABE28_010745 IPR025550 YycC-like protein ABE28_010755 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY ABE28_010760 IPR003781 CoA-binding ABE28_010760 IPR036291 NAD(P)-binding domain superfamily ABE28_010765 IPR006171 TOPRIM domain ABE28_010765 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_010765 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ABE28_010765 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes ABE28_010765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_010765 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010765 IPR002288 DNA gyrase B subunit, C-terminal ABE28_010765 IPR001241 DNA topoisomerase, type IIA ABE28_010765 IPR018522 DNA topoisomerase, type IIA, conserved site ABE28_010765 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ABE28_010765 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ABE28_010765 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_010770 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ABE28_010770 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_010770 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ABE28_010770 IPR005741 DNA topoisomerase IV subunit A, Gram-positive ABE28_010770 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ABE28_010770 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ABE28_010770 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat ABE28_010775 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010775 IPR020845 AMP-binding, conserved site ABE28_010775 IPR000873 AMP-dependent synthetase/ligase ABE28_010775 IPR042099 AMP-dependent synthetase-like superfamily ABE28_010780 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_010780 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_010780 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_010780 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_010780 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_010780 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_010780 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_010785 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_010785 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_010785 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_010785 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_010785 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_010785 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_010785 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_010790 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_010790 IPR036291 NAD(P)-binding domain superfamily ABE28_010790 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_010790 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010795 IPR016709 Uncharacterised protein family UPF0336 ABE28_010795 IPR039569 N-terminal of MaoC-like dehydratase ABE28_010795 IPR029069 HotDog domain superfamily ABE28_010805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_010805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_010805 IPR003593 AAA+ ATPase domain ABE28_010805 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_010805 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010810 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ ABE28_010810 IPR005486 Glucokinase regulatory protein, conserved site ABE28_010810 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein ABE28_010810 IPR001347 Sugar isomerase (SIS) ABE28_010815 IPR035472 RpiR-like, SIS domain ABE28_010815 IPR000281 Helix-turn-helix protein RpiR ABE28_010815 IPR009057 Homeobox-like domain superfamily ABE28_010815 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010815 IPR001347 Sugar isomerase (SIS) ABE28_010820 IPR003352 Phosphotransferase system, EIIC ABE28_010820 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_010820 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_010820 IPR036878 Glucose permease domain IIB ABE28_010820 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_010830 IPR001764 Glycoside hydrolase, family 3, N-terminal ABE28_010830 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily ABE28_010830 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ABE28_010830 IPR017853 Glycoside hydrolase superfamily ABE28_010830 IPR002772 Glycoside hydrolase family 3 C-terminal domain ABE28_010830 IPR019800 Glycoside hydrolase, family 3, active site ABE28_010835 IPR008302 Uncharacterised conserved protein UCP016719 ABE28_010840 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_010840 IPR036878 Glucose permease domain IIB ABE28_010840 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_010840 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component ABE28_010840 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_010840 IPR003352 Phosphotransferase system, EIIC ABE28_010850 IPR004104 Oxidoreductase, C-terminal ABE28_010850 IPR036291 NAD(P)-binding domain superfamily ABE28_010850 IPR000683 Oxidoreductase, N-terminal ABE28_010855 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_010855 IPR036259 MFS transporter superfamily ABE28_010855 IPR004734 Multidrug resistance protein ABE28_010855 IPR005829 Sugar transporter, conserved site ABE28_010855 IPR020846 Major facilitator superfamily domain ABE28_010855 IPR011701 Major facilitator superfamily ABE28_010865 IPR000873 AMP-dependent synthetase/ligase ABE28_010865 IPR020845 AMP-binding, conserved site ABE28_010865 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010865 IPR042099 AMP-dependent synthetase-like superfamily ABE28_010875 IPR006680 Amidohydrolase-related ABE28_010875 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_010875 IPR032466 Metal-dependent hydrolase ABE28_010875 IPR020043 Deacetylase Atu3266-like ABE28_010880 IPR006337 D-glucosaminate-6-phosphate ammonia lyase DgaE-like ABE28_010880 IPR018319 L-seryl-tRNA selenium transferase-like ABE28_010880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_010880 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_010885 IPR013785 Aldolase-type TIM barrel ABE28_010885 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase ABE28_010895 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010895 IPR000524 Transcription regulator HTH, GntR ABE28_010895 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_010895 IPR011663 UbiC transcription regulator-associated ABE28_010895 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010900 IPR003474 Gluconate transporter ABE28_010905 IPR005119 LysR, substrate-binding ABE28_010905 IPR000847 Transcription regulator HTH, LysR ABE28_010905 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010905 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010910 IPR017927 FAD-binding domain, ferredoxin reductase-type ABE28_010910 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding ABE28_010910 IPR001094 Flavodoxin-like ABE28_010910 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain ABE28_010910 IPR008254 Flavodoxin/nitric oxide synthase ABE28_010910 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ABE28_010910 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_010910 IPR001433 Oxidoreductase FAD/NAD(P)-binding ABE28_010910 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily ABE28_010910 IPR017938 Riboflavin synthase-like beta-barrel ABE28_010910 IPR029039 Flavoprotein-like superfamily ABE28_010915 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit ABE28_010915 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily ABE28_010915 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site ABE28_010915 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain ABE28_010915 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain ABE28_010925 IPR004761 Spore germination GerAB ABE28_010930 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_010935 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_010940 IPR004761 Spore germination GerAB ABE28_010945 IPR008844 Spore germination GerAC ABE28_010945 IPR038501 Spore germination GerAC superfamily ABE28_010950 IPR002937 Amine oxidase ABE28_010950 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010950 IPR001613 Flavin amine oxidase ABE28_010955 IPR002585 Cytochrome ubiquinol oxidase subunit 1 ABE28_010960 IPR003317 Cytochrome ubiquinol oxidase subunit 2 ABE28_010970 IPR009057 Homeobox-like domain superfamily ABE28_010970 IPR001647 DNA-binding HTH domain, TetR-type ABE28_010970 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_010975 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_010975 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_010975 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_010975 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_010975 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_010975 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_010975 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_010980 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010980 IPR000873 AMP-dependent synthetase/ligase ABE28_010980 IPR020845 AMP-binding, conserved site ABE28_010985 IPR011761 ATP-grasp fold ABE28_010985 IPR013815 ATP-grasp fold, subdomain 1 ABE28_010985 IPR011764 Biotin carboxylation domain ABE28_010985 IPR005482 Biotin carboxylase, C-terminal ABE28_010985 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ABE28_010985 IPR016185 Pre-ATP-grasp domain superfamily ABE28_010985 IPR011054 Rudiment single hybrid motif ABE28_010985 IPR005481 Biotin carboxylase-like, N-terminal domain ABE28_010990 IPR011053 Single hybrid motif ABE28_010990 IPR000089 Biotin/lipoyl attachment ABE28_010995 IPR013785 Aldolase-type TIM barrel ABE28_010995 IPR000891 Pyruvate carboxyltransferase ABE28_011000 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_011000 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_011000 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_011000 IPR029045 ClpP/crotonase-like domain superfamily ABE28_011005 IPR034733 Acetyl-CoA carboxylase ABE28_011005 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ABE28_011005 IPR029045 ClpP/crotonase-like domain superfamily ABE28_011005 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ABE28_011015 IPR000868 Isochorismatase-like ABE28_011015 IPR036380 Isochorismatase-like superfamily ABE28_011020 IPR013785 Aldolase-type TIM barrel ABE28_011020 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase ABE28_011020 IPR041619 Nicotinate phosphoribosyltransferase C-terminal domain ABE28_011020 IPR006405 Nicotinate phosphoribosyltransferase pncB-type ABE28_011020 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal ABE28_011020 IPR007229 Nicotinate phosphoribosyltransferase family ABE28_011020 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain ABE28_011025 IPR022926 NH(3)-dependent NAD(+) synthetase ABE28_011025 IPR003694 NAD(+) synthetase ABE28_011025 IPR022310 NAD/GMP synthase ABE28_011025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_011055 IPR031681 Domain of unknown function DUF5082 ABE28_011065 IPR003352 Phosphotransferase system, EIIC ABE28_011065 IPR010973 Phosphotransferase system, sucrose-specific IIBC component ABE28_011065 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_011065 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_011065 IPR036878 Glucose permease domain IIB ABE28_011065 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ABE28_011065 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_011075 IPR035437 SNase-like, OB-fold superfamily ABE28_011075 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold ABE28_011075 IPR002071 Thermonuclease active site ABE28_011075 IPR008613 Excalibur calcium-binding domain ABE28_011090 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_011090 IPR039561 Peptidase M15C ABE28_011100 IPR036259 MFS transporter superfamily ABE28_011100 IPR004748 Polyol permease ABE28_011100 IPR020846 Major facilitator superfamily domain ABE28_011100 IPR011701 Major facilitator superfamily ABE28_011105 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_011105 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC ABE28_011105 IPR013014 Phosphotransferase system, EIIC component, type 2 ABE28_011105 IPR003352 Phosphotransferase system, EIIC ABE28_011105 IPR029503 Phosphotransferase system EIIB component, mannitol-specific ABE28_011105 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_011105 IPR036095 PTS system IIB component-like superfamily ABE28_011110 IPR011608 PRD domain ABE28_011110 IPR007737 Mga helix-turn-helix domain ABE28_011110 IPR013196 Helix-turn-helix, type 11 ABE28_011110 IPR002178 PTS EIIA type-2 domain ABE28_011110 IPR036095 PTS system IIB component-like superfamily ABE28_011110 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_011110 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_011110 IPR016152 Phosphotransferase/anion transporter ABE28_011110 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011110 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011110 IPR036634 PRD domain superfamily ABE28_011115 IPR006000 Xylulokinase ABE28_011115 IPR000577 Carbohydrate kinase, FGGY ABE28_011115 IPR018485 Carbohydrate kinase, FGGY, C-terminal ABE28_011115 IPR018483 Carbohydrate kinase, FGGY, conserved site ABE28_011115 IPR018484 Carbohydrate kinase, FGGY, N-terminal ABE28_011120 IPR011032 GroES-like superfamily ABE28_011120 IPR020843 Polyketide synthase, enoylreductase domain ABE28_011120 IPR036291 NAD(P)-binding domain superfamily ABE28_011120 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_011120 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_011120 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_011140 IPR018043 Sodium:galactoside symporter, conserved site ABE28_011140 IPR001927 Sodium:galactoside symporter ABE28_011140 IPR036259 MFS transporter superfamily ABE28_011140 IPR039672 Lactose permease-like ABE28_011145 IPR036661 Luciferase-like domain superfamily ABE28_011145 IPR011251 Luciferase-like domain ABE28_011145 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent ABE28_011150 IPR016181 Acyl-CoA N-acyltransferase ABE28_011150 IPR000182 GNAT domain ABE28_011160 IPR011006 CheY-like superfamily ABE28_011160 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_011160 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011160 IPR001789 Signal transduction response regulator, receiver domain ABE28_011160 IPR039420 Transcriptional regulatory protein WalR-like ABE28_011165 IPR033870 FatB domain ABE28_011165 IPR002491 ABC transporter periplasmic binding domain ABE28_011170 IPR037294 ABC transporter, BtuC-like ABE28_011170 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_011175 IPR037294 ABC transporter, BtuC-like ABE28_011175 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_011180 IPR003439 ABC transporter-like ABE28_011180 IPR003593 AAA+ ATPase domain ABE28_011180 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011215 IPR025006 Protein of unknown function DUF3900 ABE28_011215 IPR025012 Domain of unknown function DUF3898 ABE28_011220 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_011220 IPR039379 Protoglobin, globin sensor domain ABE28_011220 IPR009050 Globin-like superfamily ABE28_011220 IPR012292 Globin/Protoglobin ABE28_011225 IPR006312 Sec-independent protein translocase protein TatA/E ABE28_011225 IPR003369 Sec-independent protein translocase protein TatA/B/E ABE28_011235 IPR005829 Sugar transporter, conserved site ABE28_011235 IPR011701 Major facilitator superfamily ABE28_011235 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family ABE28_011235 IPR020846 Major facilitator superfamily domain ABE28_011235 IPR036259 MFS transporter superfamily ABE28_011245 IPR003844 Uncharacterised protein family UPF0060 ABE28_011250 IPR000620 EamA domain ABE28_011255 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011255 IPR001279 Metallo-beta-lactamase ABE28_011260 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system ABE28_011270 IPR001633 EAL domain ABE28_011270 IPR000160 GGDEF domain ABE28_011270 IPR035919 EAL domain superfamily ABE28_011270 IPR005330 MHYT domain ABE28_011270 IPR029787 Nucleotide cyclase ABE28_011280 IPR000612 Proteolipid membrane potential modulator ABE28_011310 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_011310 IPR002797 Polysaccharide biosynthesis protein ABE28_011320 IPR004840 Amino acid permease, conserved site ABE28_011320 IPR004841 Amino acid permease/ SLC12A domain ABE28_011325 IPR023696 Ureohydrolase domain superfamily ABE28_011325 IPR006035 Ureohydrolase ABE28_011325 IPR014033 Arginase ABE28_011325 IPR020855 Ureohydrolase, manganese-binding site ABE28_011340 IPR013108 Amidohydrolase 3 ABE28_011340 IPR032466 Metal-dependent hydrolase ABE28_011340 IPR033932 YtcJ like ABE28_011340 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_011345 IPR011650 Peptidase M20, dimerisation domain ABE28_011345 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_011345 IPR002933 Peptidase M20 ABE28_011345 IPR010158 Amidase, carbamoylase-type ABE28_011350 IPR021741 Protein of unknown function DUF3311 ABE28_011355 IPR001734 Sodium/solute symporter ABE28_011355 IPR038377 Sodium/glucose symporter superfamily ABE28_011360 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_011360 IPR041382 Bacterial dipeptidyl-peptidase SH3 domain ABE28_011360 IPR038765 Papain-like cysteine peptidase superfamily ABE28_011365 IPR018745 Domain of unknown function DUF2294 ABE28_011370 IPR004623 Potassium-transporting ATPase A chain ABE28_011375 IPR008250 P-type ATPase, A domain superfamily ABE28_011375 IPR036412 HAD-like superfamily ABE28_011375 IPR018303 P-type ATPase, phosphorylation site ABE28_011375 IPR006391 P-type ATPase, B chain, subfamily IA ABE28_011375 IPR001757 P-type ATPase ABE28_011375 IPR023299 P-type ATPase, cytoplasmic domain N ABE28_011375 IPR023298 P-type ATPase, transmembrane domain superfamily ABE28_011380 IPR003820 Potassium-transporting ATPase C chain ABE28_011385 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal ABE28_011385 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_011390 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_011390 IPR029058 Alpha/Beta hydrolase fold ABE28_011390 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ABE28_011395 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria ABE28_011395 IPR018422 Cation/H+ exchanger, CPA1 family ABE28_011395 IPR002014 VHS domain ABE28_011395 IPR006153 Cation/H+ exchanger ABE28_011400 IPR004033 UbiE/COQ5 methyltransferase ABE28_011400 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_011400 IPR023576 UbiE/COQ5 methyltransferase, conserved site ABE28_011415 IPR023346 Lysozyme-like domain superfamily ABE28_011425 IPR011008 Dimeric alpha-beta barrel ABE28_011425 IPR014910 Putative monooxygenase YdhR ABE28_011455 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_011455 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_011455 IPR034693 Diadenylate cyclase CdaS ABE28_011455 IPR014046 Diadenylate cyclase ABE28_011455 IPR019457 Uncharacterised domain YojJ, N-terminal ABE28_011460 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ABE28_011460 IPR000994 Peptidase M24 ABE28_011460 IPR036005 Creatinase/aminopeptidase-like ABE28_011460 IPR001714 Peptidase M24, methionine aminopeptidase ABE28_011475 IPR006073 GTP binding domain ABE28_011475 IPR016484 GTP-binding protein EngA ABE28_011475 IPR031166 EngA-type guanine nucleotide-binding (G) domain ABE28_011475 IPR032859 GTPase Der, C-terminal KH-domain-like ABE28_011475 IPR015946 K homology domain-like, alpha/beta ABE28_011475 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011475 IPR005225 Small GTP-binding protein domain ABE28_011480 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_011480 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABE28_011480 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_011480 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_011480 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_011480 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_011485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_011485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_011485 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_011485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_011485 IPR005467 Histidine kinase domain ABE28_011490 IPR005914 Acetoacetyl-CoA synthase ABE28_011490 IPR000873 AMP-dependent synthetase/ligase ABE28_011490 IPR042099 AMP-dependent synthetase-like superfamily ABE28_011490 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_011490 IPR020845 AMP-binding, conserved site ABE28_011495 IPR004136 Nitronate monooxygenase ABE28_011495 IPR013785 Aldolase-type TIM barrel ABE28_011515 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_011515 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_011520 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_011520 IPR036291 NAD(P)-binding domain superfamily ABE28_011520 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_011520 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011525 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_011525 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_011525 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_011525 IPR015590 Aldehyde dehydrogenase domain ABE28_011525 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_011525 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_011535 IPR004681 TRAP transporter large membrane protein DctM ABE28_011535 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ABE28_011545 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_011545 IPR004682 TRAP transporter solute receptor, DctP family ABE28_011545 IPR018389 TRAP transporter solute receptor DctP/TeaA ABE28_011545 IPR038404 TRAP transporter solute receptor DctP superfamily ABE28_011545 IPR007387 TRAP transporter, small membrane protein DctQ ABE28_011550 IPR017654 Galactarate dehydratase GarD-like ABE28_011550 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ABE28_011550 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae ABE28_011550 IPR013974 SAF domain ABE28_011555 IPR013974 SAF domain ABE28_011555 IPR017654 Galactarate dehydratase GarD-like ABE28_011555 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ABE28_011565 IPR020835 Catalase superfamily ABE28_011565 IPR010582 Catalase immune-responsive domain ABE28_011565 IPR018028 Catalase, mono-functional, haem-containing ABE28_011565 IPR040333 Catalase, clade 3 ABE28_011565 IPR024708 Catalase active site ABE28_011565 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 ABE28_011565 IPR002226 Catalase haem-binding site ABE28_011565 IPR011614 Catalase core domain ABE28_011565 IPR037060 Catalase core domain superfamily ABE28_011570 IPR036291 NAD(P)-binding domain superfamily ABE28_011570 IPR001088 Glycoside hydrolase, family 4 ABE28_011570 IPR022616 Glycosyl hydrolase, family 4, C-terminal ABE28_011570 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ABE28_011570 IPR019802 Glycoside hydrolase, family 4, conserved site ABE28_011575 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily ABE28_011575 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit ABE28_011580 IPR000600 ROK family ABE28_011590 IPR003352 Phosphotransferase system, EIIC ABE28_011590 IPR004501 Phosphotransferase system, EIIC component, type 3 ABE28_011595 IPR036095 PTS system IIB component-like superfamily ABE28_011595 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_011595 IPR013012 Phosphotransferase system, EIIB component, type 3 ABE28_011600 IPR018120 Glycoside hydrolase family 1, active site ABE28_011600 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_011600 IPR001360 Glycoside hydrolase family 1 ABE28_011600 IPR017853 Glycoside hydrolase superfamily ABE28_011605 IPR001347 Sugar isomerase (SIS) ABE28_011605 IPR035474 KpsF-like, SIS domain ABE28_011605 IPR000644 CBS domain ABE28_011605 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type ABE28_011620 IPR001362 Glycoside hydrolase, family 32 ABE28_011620 IPR018053 Glycoside hydrolase, family 32, active site ABE28_011620 IPR006232 Sucrose-6-phosphate hydrolase ABE28_011620 IPR013189 Glycosyl hydrolase family 32, C-terminal ABE28_011620 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_011620 IPR013148 Glycosyl hydrolase family 32, N-terminal ABE28_011620 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_011625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_011625 IPR000843 LacI-type HTH domain ABE28_011625 IPR028082 Periplasmic binding protein-like I ABE28_011630 IPR000576 LacY/RafB permease family ABE28_011630 IPR018457 LacY/RafB permease family, conserved site ABE28_011630 IPR020846 Major facilitator superfamily domain ABE28_011630 IPR036259 MFS transporter superfamily ABE28_011640 IPR002139 Ribokinase/fructokinase ABE28_011640 IPR011611 Carbohydrate kinase PfkB ABE28_011640 IPR029056 Ribokinase-like ABE28_011640 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_011645 IPR001362 Glycoside hydrolase, family 32 ABE28_011645 IPR018053 Glycoside hydrolase, family 32, active site ABE28_011645 IPR013189 Glycosyl hydrolase family 32, C-terminal ABE28_011645 IPR013148 Glycosyl hydrolase family 32, N-terminal ABE28_011645 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_011645 IPR006232 Sucrose-6-phosphate hydrolase ABE28_011645 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_011650 IPR000576 LacY/RafB permease family ABE28_011650 IPR018457 LacY/RafB permease family, conserved site ABE28_011650 IPR020846 Major facilitator superfamily domain ABE28_011650 IPR036259 MFS transporter superfamily ABE28_011655 IPR000843 LacI-type HTH domain ABE28_011655 IPR028082 Periplasmic binding protein-like I ABE28_011655 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_011665 IPR009051 Alpha-helical ferredoxin ABE28_011665 IPR012257 Glycolate oxidase, iron-sulphur subunit ABE28_011665 IPR004017 Cysteine-rich domain ABE28_011665 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_011665 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_011670 IPR006094 FAD linked oxidase, N-terminal ABE28_011670 IPR016166 FAD-binding domain, PCMH-type ABE28_011670 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_011670 IPR016164 FAD-linked oxidase-like, C-terminal ABE28_011670 IPR004113 FAD-linked oxidase, C-terminal ABE28_011670 IPR004490 Glycolate oxidase subunit GlcD ABE28_011670 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_011675 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_011675 IPR006469 NifC-like ABC-type porter ABE28_011675 IPR011867 Molybdate ABC transporter, permease protein ABE28_011675 IPR035906 MetI-like superfamily ABE28_011680 IPR035906 MetI-like superfamily ABE28_011680 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_011690 IPR026045 Ferric binding protein ABE28_011690 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_011700 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_011700 IPR025944 Sigma-54 interaction domain, conserved site ABE28_011700 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_011700 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_011700 IPR003593 AAA+ ATPase domain ABE28_011700 IPR011006 CheY-like superfamily ABE28_011700 IPR009057 Homeobox-like domain superfamily ABE28_011700 IPR002197 DNA binding HTH domain, Fis-type ABE28_011700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011700 IPR001789 Signal transduction response regulator, receiver domain ABE28_011705 IPR000014 PAS domain ABE28_011705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_011705 IPR013767 PAS fold ABE28_011705 IPR005467 Histidine kinase domain ABE28_011705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_011705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011705 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_011705 IPR003660 HAMP domain ABE28_011705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_011705 IPR035965 PAS domain superfamily ABE28_011705 IPR000700 PAS-associated, C-terminal ABE28_011720 IPR034835 Beta-amylase, CBM20 domain ABE28_011720 IPR002044 Carbohydrate binding module family 20 ABE28_011720 IPR001554 Glycoside hydrolase, family 14 ABE28_011720 IPR018238 Glycoside hydrolase, family 14, conserved site ABE28_011720 IPR000125 Glycoside hydrolase, family 14A, bacterial ABE28_011720 IPR013783 Immunoglobulin-like fold ABE28_011720 IPR017853 Glycoside hydrolase superfamily ABE28_011725 IPR007405 Bacteriophage KVP40, Orf299 ABE28_011730 IPR019688 Protein of unknown function DUF2533 ABE28_011740 IPR011701 Major facilitator superfamily ABE28_011740 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_011740 IPR023692 Multidrug resistance protein MdtG ABE28_011740 IPR036259 MFS transporter superfamily ABE28_011740 IPR020846 Major facilitator superfamily domain ABE28_011745 IPR006685 Mechanosensitive ion channel MscS ABE28_011745 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_011745 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ABE28_011745 IPR010920 LSM domain superfamily ABE28_011780 IPR006076 FAD dependent oxidoreductase ABE28_011780 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011805 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011805 IPR030862 L-2-hydroxyglutarate dehydrogenase ABE28_011805 IPR006076 FAD dependent oxidoreductase ABE28_011810 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_011810 IPR000524 Transcription regulator HTH, GntR ABE28_011810 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011810 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011820 IPR002104 Integrase, catalytic domain ABE28_011820 IPR013762 Integrase-like, catalytic domain superfamily ABE28_011820 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_011825 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_011825 IPR017515 Methylmalonyl-CoA epimerase ABE28_011825 IPR018146 Glyoxalase I, conserved site ABE28_011825 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011830 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_011830 IPR023905 Acetyldiaminopimelate deacetylase ABE28_011830 IPR017439 Amidohydrolase ABE28_011830 IPR002933 Peptidase M20 ABE28_011830 IPR011650 Peptidase M20, dimerisation domain ABE28_011835 IPR027475 Asparaginase/glutaminase, active site 2 ABE28_011835 IPR040919 Asparaginase/glutaminase, C-terminal ABE28_011835 IPR027473 L-asparaginase, C-terminal ABE28_011835 IPR027474 L-asparaginase, N-terminal ABE28_011835 IPR020827 Asparaginase/glutaminase, active site 1 ABE28_011835 IPR006034 Asparaginase/glutaminase-like ABE28_011835 IPR036152 Asparaginase/glutaminase-like superfamily ABE28_011835 IPR004550 L-asparaginase, type II ABE28_011835 IPR037152 L-asparaginase, N-terminal domain superfamily ABE28_011840 IPR001734 Sodium/solute symporter ABE28_011840 IPR038377 Sodium/glucose symporter superfamily ABE28_011855 IPR004601 UV-endonuclease UvdE ABE28_011855 IPR036237 Xylose isomerase-like superfamily ABE28_011855 IPR023520 UV-endonuclease UvdE, bacterial ABE28_011865 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_011865 IPR013780 Glycosyl hydrolase, all-beta ABE28_011865 IPR017853 Glycoside hydrolase superfamily ABE28_011865 IPR013783 Immunoglobulin-like fold ABE28_011865 IPR014756 Immunoglobulin E-set ABE28_011865 IPR040697 Pullulanase, N1 domain ABE28_011865 IPR011840 Pullulanase, type I ABE28_011865 IPR004193 Glycoside hydrolase, family 13, N-terminal ABE28_011870 IPR003593 AAA+ ATPase domain ABE28_011870 IPR003959 ATPase, AAA-type, core ABE28_011870 IPR019489 Clp ATPase, C-terminal ABE28_011870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011870 IPR018368 ClpA/B, conserved site 1 ABE28_011870 IPR028299 ClpA/B, conserved site 2 ABE28_011870 IPR041546 ClpA/ClpB, AAA lid domain ABE28_011870 IPR001270 ClpA/B family ABE28_011870 IPR001943 UVR domain ABE28_011885 IPR018392 LysM domain ABE28_011885 IPR036779 LysM domain superfamily ABE28_011885 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_011885 IPR038765 Papain-like cysteine peptidase superfamily ABE28_011905 IPR005119 LysR, substrate-binding ABE28_011905 IPR000847 Transcription regulator HTH, LysR ABE28_011905 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011905 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011910 IPR018383 Uncharacterised protein family UPF0324, prokaryote ABE28_011915 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic ABE28_011915 IPR009165 S-adenosylmethionine decarboxylase, bacterial ABE28_011915 IPR016067 S-adenosylmethionine decarboxylase, core ABE28_011920 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_011920 IPR035906 MetI-like superfamily ABE28_011925 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain ABE28_011930 IPR035906 MetI-like superfamily ABE28_011930 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_011935 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011935 IPR005892 Glycine betaine transport ATP-binding subunit ABE28_011935 IPR000644 CBS domain ABE28_011935 IPR017871 ABC transporter, conserved site ABE28_011935 IPR003439 ABC transporter-like ABE28_011935 IPR003593 AAA+ ATPase domain ABE28_011945 IPR020846 Major facilitator superfamily domain ABE28_011945 IPR036259 MFS transporter superfamily ABE28_011945 IPR000849 Sugar phosphate transporter ABE28_011945 IPR011701 Major facilitator superfamily ABE28_011965 IPR016040 NAD(P)-binding domain ABE28_011965 IPR000534 Semialdehyde dehydrogenase, NAD-binding ABE28_011965 IPR036291 NAD(P)-binding domain superfamily ABE28_011970 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_011970 IPR029033 Histidine phosphatase superfamily ABE28_011970 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site ABE28_011980 IPR019264 Domain of unknown function DUF2179 ABE28_011980 IPR022930 Protein of unknown function UPF0316 ABE28_011995 IPR020848 AP endonuclease 1, conserved site ABE28_011995 IPR004808 AP endonuclease 1 ABE28_011995 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABE28_011995 IPR020847 AP endonuclease 1, binding site ABE28_011995 IPR005135 Endonuclease/exonuclease/phosphatase ABE28_012000 IPR022924 Cardiolipin synthase ABE28_012000 IPR027379 Cardiolipin synthase N-terminal ABE28_012000 IPR025202 Phospholipase D-like domain ABE28_012000 IPR001736 Phospholipase D/Transphosphatidylase ABE28_012000 IPR030874 Cardiolipin synthase, Firmicutes-type ABE28_012005 IPR013534 Starch synthase, catalytic domain ABE28_012005 IPR001296 Glycosyl transferase, family 1 ABE28_012005 IPR011835 Bacterial/plant glycogen synthase ABE28_012010 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit ABE28_012010 IPR011004 Trimeric LpxA-like superfamily ABE28_012010 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012010 IPR005835 Nucleotidyl transferase domain ABE28_012015 IPR005836 ADP-glucose pyrophosphorylase, conserved site ABE28_012015 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial ABE28_012015 IPR001451 Hexapeptide repeat ABE28_012015 IPR005835 Nucleotidyl transferase domain ABE28_012015 IPR011831 Glucose-1-phosphate adenylyltransferase ABE28_012015 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012015 IPR011004 Trimeric LpxA-like superfamily ABE28_012020 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB ABE28_012020 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_012020 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta ABE28_012020 IPR004193 Glycoside hydrolase, family 13, N-terminal ABE28_012020 IPR037439 1,4-alpha-glucan-branching enzyme ABE28_012020 IPR017853 Glycoside hydrolase superfamily ABE28_012020 IPR013780 Glycosyl hydrolase, all-beta ABE28_012020 IPR013783 Immunoglobulin-like fold ABE28_012030 IPR015637 G/U mismatch-specific DNA glycosylase ABE28_012030 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial ABE28_012030 IPR005122 Uracil-DNA glycosylase-like ABE28_012030 IPR036895 Uracil-DNA glycosylase-like domain superfamily ABE28_012050 IPR002781 Transmembrane protein TauE-like ABE28_012055 IPR028161 Siroheme biosynthesis protein Met8 ABE28_012055 IPR006367 Sirohaem synthase, N-terminal ABE28_012055 IPR028281 Siroheme synthase, central domain ABE28_012055 IPR036291 NAD(P)-binding domain superfamily ABE28_012060 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX ABE28_012065 IPR000878 Tetrapyrrole methylase ABE28_012065 IPR014776 Tetrapyrrole methylase, subdomain 2 ABE28_012065 IPR014777 Tetrapyrrole methylase, subdomain 1 ABE28_012065 IPR035996 Tetrapyrrole methylase superfamily ABE28_012065 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site ABE28_012065 IPR006366 Uroporphyrin-III C-methyltransferase ABE28_012075 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain ABE28_012075 IPR012798 Cobalamin (vitamin B12) biosynthesis CobG-like ABE28_012075 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily ABE28_012075 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain ABE28_012075 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site ABE28_012080 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012080 IPR002891 Adenylyl-sulfate kinase ABE28_012085 IPR002650 Sulphate adenylyltransferase ABE28_012085 IPR025980 ATP-sulfurylase PUA-like domain ABE28_012085 IPR015947 PUA-like superfamily ABE28_012085 IPR020792 Sulphate adenylyltransferase, prokaryotic-type ABE28_012085 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012085 IPR024951 Sulphate adenylyltransferase catalytic domain ABE28_012090 IPR011798 Adenosine 5'-phosphosulphate reductase ABE28_012090 IPR002500 Phosphoadenosine phosphosulphate reductase ABE28_012090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012090 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase ABE28_012100 IPR020048 NADPH-dependent FMN reductase, SsuE ABE28_012100 IPR005025 NADPH-dependent FMN reductase-like ABE28_012100 IPR029039 Flavoprotein-like superfamily ABE28_012105 IPR029062 Class I glutamine amidotransferase-like ABE28_012105 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO ABE28_012105 IPR021196 PdxT/SNO family, conserved site ABE28_012110 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ ABE28_012110 IPR033755 PdxS/SNZ N-terminal domain ABE28_012110 IPR013785 Aldolase-type TIM barrel ABE28_012110 IPR011060 Ribulose-phosphate binding barrel ABE28_012115 IPR000524 Transcription regulator HTH, GntR ABE28_012115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_012115 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012115 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_012115 IPR004839 Aminotransferase, class I/classII ABE28_012115 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012120 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_012120 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ABE28_012120 IPR011780 D-serine ammonia-lyase ABE28_012120 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_012125 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_012125 IPR006805 Anthranilate synthase component I, N-terminal ABE28_012125 IPR019999 Anthranilate synthase component I-like ABE28_012125 IPR005801 ADC synthase ABE28_012125 IPR005802 Aminodeoxychorismate synthase, component I ABE28_012130 IPR036661 Luciferase-like domain superfamily ABE28_012130 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_012130 IPR011251 Luciferase-like domain ABE28_012135 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_012135 IPR036661 Luciferase-like domain superfamily ABE28_012135 IPR011251 Luciferase-like domain ABE28_012145 IPR042088 Oligoendopeptidase F, C-terminal domain ABE28_012145 IPR001567 Peptidase M3A/M3B catalytic domain ABE28_012145 IPR013647 Oligopeptidase F, N-terminal domain ABE28_012145 IPR004438 Peptidase M3B, oligoendopeptidase F ABE28_012150 IPR029039 Flavoprotein-like superfamily ABE28_012150 IPR003680 Flavodoxin-like fold ABE28_012150 IPR023048 NADH-azoreductase, FMN-dependent ABE28_012155 IPR014988 Uncharacterised protein family, YqcI/YcgG ABE28_012160 IPR038300 SASP, alpha/beta-type superfamily ABE28_012160 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_012160 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_012165 IPR039697 Iron-type alcohol dehydrogenase-like ABE28_012165 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ABE28_012165 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ABE28_012170 IPR009078 Ferritin-like superfamily ABE28_012170 IPR033908 R2-like ligand binding oxidase ABE28_012170 IPR000358 Ribonucleotide reductase small subunit family ABE28_012170 IPR012348 Ribonucleotide reductase-like ABE28_012175 IPR011006 CheY-like superfamily ABE28_012175 IPR001789 Signal transduction response regulator, receiver domain ABE28_012175 IPR000792 Transcription regulator LuxR, C-terminal ABE28_012175 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_012180 IPR011009 Protein kinase-like domain superfamily ABE28_012185 IPR001544 Aminotransferase class IV ABE28_012185 IPR033939 Branched-chain aminotransferase ABE28_012185 IPR005786 Branched-chain amino acid aminotransferase II ABE28_012185 IPR018300 Aminotransferase, class IV, conserved site ABE28_012185 IPR036038 Aminotransferase-like, PLP-dependent enzymes ABE28_012190 IPR002549 Transmembrane protein TqsA-like ABE28_012200 IPR005490 L,D-transpeptidase catalytic domain ABE28_012200 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_012220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_012220 IPR035906 MetI-like superfamily ABE28_012220 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_012225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_012225 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_012225 IPR035906 MetI-like superfamily ABE28_012230 IPR001320 Ionotropic glutamate receptor ABE28_012230 IPR018313 Solute-binding protein family 3, conserved site ABE28_012230 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_012235 IPR003439 ABC transporter-like ABE28_012235 IPR003593 AAA+ ATPase domain ABE28_012235 IPR017871 ABC transporter, conserved site ABE28_012235 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012235 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_012245 IPR004776 Membrane transport protein ABE28_012245 IPR014024 Auxin efflux carrier, plant type ABE28_012250 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_012250 IPR016193 Cytidine deaminase-like ABE28_012250 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_012260 IPR015943 WD40/YVTN repeat-like-containing domain superfamily ABE28_012260 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily ABE28_012260 IPR019405 Lactonase, 7-bladed beta propeller ABE28_012275 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_012275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_012275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_012275 IPR005814 Aminotransferase class-III ABE28_012280 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_012280 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria ABE28_012280 IPR010061 Methylmalonate-semialdehyde dehydrogenase ABE28_012280 IPR015590 Aldehyde dehydrogenase domain ABE28_012280 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_012280 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_012280 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_012285 IPR016181 Acyl-CoA N-acyltransferase ABE28_012285 IPR000182 GNAT domain ABE28_012290 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ABE28_012290 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_012290 IPR036291 NAD(P)-binding domain superfamily ABE28_012295 IPR002059 Cold-shock protein, DNA-binding ABE28_012295 IPR011129 Cold shock domain ABE28_012295 IPR012340 Nucleic acid-binding, OB-fold ABE28_012295 IPR012156 Cold shock, CspA ABE28_012295 IPR019844 Cold-shock (CSD) domain ABE28_012300 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_012300 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_012300 IPR029045 ClpP/crotonase-like domain superfamily ABE28_012300 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_012310 IPR003593 AAA+ ATPase domain ABE28_012310 IPR017871 ABC transporter, conserved site ABE28_012310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_012310 IPR003439 ABC transporter-like ABE28_012310 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012315 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_012315 IPR003593 AAA+ ATPase domain ABE28_012315 IPR003439 ABC transporter-like ABE28_012315 IPR017871 ABC transporter, conserved site ABE28_012315 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012320 IPR035906 MetI-like superfamily ABE28_012320 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABE28_012320 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_012325 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_012325 IPR035906 MetI-like superfamily ABE28_012330 IPR023765 Solute-binding protein family 5, conserved site ABE28_012330 IPR039424 Solute-binding protein family 5 ABE28_012330 IPR000914 Solute-binding protein family 5 domain ABE28_012330 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_012390 IPR008979 Galactose-binding-like domain superfamily ABE28_012390 IPR022385 Rhs repeat-associated core ABE28_012390 IPR006530 YD repeat ABE28_012390 IPR031325 RHS repeat ABE28_012405 IPR014044 CAP domain ABE28_012405 IPR014258 CAP domain, YkwD-like ABE28_012405 IPR035940 CAP superfamily ABE28_012415 IPR036397 Ribonuclease H superfamily ABE28_012415 IPR012337 Ribonuclease H-like superfamily ABE28_012415 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ABE28_012415 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_012415 IPR004013 PHP domain ABE28_012415 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_012415 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ABE28_012415 IPR029460 DNA polymerase, helix-hairpin-helix motif ABE28_012415 IPR040982 DNA polymerase III alpha subunit finger domain ABE28_012415 IPR016195 Polymerase/histidinol phosphatase-like ABE28_012415 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type ABE28_012420 IPR023908 xxxLxxG heptad repeat ABE28_012420 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_012420 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_012430 IPR036412 HAD-like superfamily ABE28_012430 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_012430 IPR023214 HAD superfamily ABE28_012435 IPR002524 Cation efflux protein ABE28_012435 IPR027469 Cation efflux transmembrane domain superfamily ABE28_012435 IPR023783 Cation efflux pump FieF ABE28_012435 IPR036837 Cation efflux protein, cytoplasmic domain superfamily ABE28_012435 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_012445 IPR004840 Amino acid permease, conserved site ABE28_012445 IPR004841 Amino acid permease/ SLC12A domain ABE28_012445 IPR011265 GABA permease ABE28_012450 IPR035965 PAS domain superfamily ABE28_012450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_012450 IPR013767 PAS fold ABE28_012450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_012450 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012450 IPR005467 Histidine kinase domain ABE28_012450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_012455 IPR018775 RNA repair pathway DNA polymerase beta ABE28_012460 IPR005496 Integral membrane protein TerC ABE28_012460 IPR022301 Integral membrane protein YjbE ABE28_012465 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_012465 IPR013118 Mannitol dehydrogenase, C-terminal ABE28_012465 IPR036291 NAD(P)-binding domain superfamily ABE28_012465 IPR013131 Mannitol dehydrogenase, N-terminal ABE28_012465 IPR023668 Altronate oxidoreductase ABE28_012465 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_012470 IPR011032 GroES-like superfamily ABE28_012470 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_012470 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_012470 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_012470 IPR020843 Polyketide synthase, enoylreductase domain ABE28_012470 IPR036291 NAD(P)-binding domain superfamily ABE28_012475 IPR013974 SAF domain ABE28_012475 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ABE28_012480 IPR010499 Bacterial transcription activator, effector binding ABE28_012480 IPR029442 GyrI-like small molecule binding domain ABE28_012480 IPR018060 DNA binding HTH domain, AraC-type ABE28_012480 IPR020449 Transcription regulator HTH, AraC- type ABE28_012480 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_012480 IPR018062 HTH domain AraC-type, conserved site ABE28_012480 IPR009057 Homeobox-like domain superfamily ABE28_012485 IPR011701 Major facilitator superfamily ABE28_012485 IPR020846 Major facilitator superfamily domain ABE28_012485 IPR036259 MFS transporter superfamily ABE28_012485 IPR000849 Sugar phosphate transporter ABE28_012490 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_012490 IPR000843 LacI-type HTH domain ABE28_012490 IPR028082 Periplasmic binding protein-like I ABE28_012495 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_012495 IPR036291 NAD(P)-binding domain superfamily ABE28_012495 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012500 IPR036237 Xylose isomerase-like superfamily ABE28_012500 IPR004628 Mannonate dehydratase ABE28_012505 IPR013785 Aldolase-type TIM barrel ABE28_012505 IPR031338 KDPG/KHG aldolase, active site 2 ABE28_012505 IPR000887 KDPG/KHG aldolase ABE28_012510 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_012510 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_012510 IPR036291 NAD(P)-binding domain superfamily ABE28_012510 IPR011032 GroES-like superfamily ABE28_012510 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_012510 IPR020843 Polyketide synthase, enoylreductase domain ABE28_012515 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily ABE28_012515 IPR003767 Malate/L-lactate dehydrogenase-like ABE28_012520 IPR011611 Carbohydrate kinase PfkB ABE28_012520 IPR002139 Ribokinase/fructokinase ABE28_012520 IPR029056 Ribokinase-like ABE28_012520 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_012530 IPR025980 ATP-sulfurylase PUA-like domain ABE28_012530 IPR015947 PUA-like superfamily ABE28_012530 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012530 IPR020792 Sulphate adenylyltransferase, prokaryotic-type ABE28_012530 IPR024951 Sulphate adenylyltransferase catalytic domain ABE28_012530 IPR002650 Sulphate adenylyltransferase ABE28_012535 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012535 IPR002891 Adenylyl-sulfate kinase ABE28_012540 IPR002781 Transmembrane protein TauE-like ABE28_012545 IPR001173 Glycosyltransferase 2-like ABE28_012545 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012550 IPR000368 Sucrose synthase ABE28_012550 IPR001296 Glycosyl transferase, family 1 ABE28_012560 IPR001173 Glycosyltransferase 2-like ABE28_012560 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012565 IPR016040 NAD(P)-binding domain ABE28_012565 IPR036291 NAD(P)-binding domain superfamily ABE28_012580 IPR001296 Glycosyl transferase, family 1 ABE28_012580 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ABE28_012585 IPR036291 NAD(P)-binding domain superfamily ABE28_012585 IPR016040 NAD(P)-binding domain ABE28_012595 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) ABE28_012595 IPR036291 NAD(P)-binding domain superfamily ABE28_012595 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_012600 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ABE28_012600 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ABE28_012605 IPR016040 NAD(P)-binding domain ABE28_012605 IPR036291 NAD(P)-binding domain superfamily ABE28_012610 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012610 IPR017871 ABC transporter, conserved site ABE28_012610 IPR003439 ABC transporter-like ABE28_012610 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_012610 IPR011527 ABC transporter type 1, transmembrane domain ABE28_012610 IPR039421 Type I protein exporter ABE28_012610 IPR003593 AAA+ ATPase domain ABE28_012620 IPR001223 Glycoside hydrolase family 18, catalytic domain ABE28_012620 IPR017853 Glycoside hydrolase superfamily ABE28_012620 IPR036779 LysM domain superfamily ABE28_012620 IPR011583 Chitinase II ABE28_012620 IPR041704 CFLE, GH18 catalytic domain ABE28_012620 IPR018392 LysM domain ABE28_012620 IPR029070 Chitinase insertion domain superfamily ABE28_012625 IPR036291 NAD(P)-binding domain superfamily ABE28_012625 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_012630 IPR030874 Cardiolipin synthase, Firmicutes-type ABE28_012630 IPR022924 Cardiolipin synthase ABE28_012630 IPR027379 Cardiolipin synthase N-terminal ABE28_012630 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_012630 IPR001736 Phospholipase D/Transphosphatidylase ABE28_012630 IPR025202 Phospholipase D-like domain ABE28_012635 IPR003735 Metal-sensitive transcriptional repressor ABE28_012635 IPR038390 Metal-sensitive transcriptional repressor superfamily ABE28_012650 IPR012349 FMN-binding split barrel ABE28_012650 IPR002563 Flavin reductase like domain ABE28_012655 IPR002925 Dienelactone hydrolase ABE28_012655 IPR029058 Alpha/Beta hydrolase fold ABE28_012660 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012660 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_012660 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_012665 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_012665 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_012665 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012685 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase ABE28_012685 IPR036291 NAD(P)-binding domain superfamily ABE28_012685 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_012690 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes ABE28_012690 IPR003718 OsmC/Ohr family ABE28_012690 IPR036102 OsmC/Ohr superfamily ABE28_012690 IPR015946 K homology domain-like, alpha/beta ABE28_012695 IPR005370 Uncharacterised protein family UPF0180 ABE28_012715 IPR004030 Nitric oxide synthase, N-terminal ABE28_012715 IPR017142 Nitric oxide synthase, oxygenase subunit ABE28_012715 IPR036119 Nitric oxide synthase, N-terminal domain superfamily ABE28_012720 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012720 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012720 IPR002577 Helix-turn-helix, HxlR type ABE28_012740 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_012740 IPR029058 Alpha/Beta hydrolase fold ABE28_012740 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ABE28_012740 IPR011659 WD40-like Beta Propeller ABE28_012755 IPR032710 NTF2-like domain superfamily ABE28_012755 IPR001460 Penicillin-binding protein, transpeptidase ABE28_012755 IPR012338 Beta-lactamase/transpeptidase-like ABE28_012755 IPR005311 Penicillin-binding protein, dimerisation domain ABE28_012755 IPR007887 NTF2-like N-terminal transpeptidase ABE28_012755 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ABE28_012760 IPR005650 BlaI transcriptional regulatory family ABE28_012760 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012760 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012765 IPR001460 Penicillin-binding protein, transpeptidase ABE28_012765 IPR012338 Beta-lactamase/transpeptidase-like ABE28_012765 IPR008756 Peptidase M56 ABE28_012770 IPR000644 CBS domain ABE28_012775 IPR001279 Metallo-beta-lactamase ABE28_012775 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_012780 IPR032688 ABC-2 family transporter protein ABE28_012785 IPR003593 AAA+ ATPase domain ABE28_012785 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012785 IPR017871 ABC transporter, conserved site ABE28_012785 IPR003439 ABC transporter-like ABE28_012795 IPR026032 Probable 3-phenylpropionic acid transporter ABE28_012795 IPR024989 Major facilitator superfamily associated domain ABE28_012795 IPR020846 Major facilitator superfamily domain ABE28_012795 IPR036259 MFS transporter superfamily ABE28_012800 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012800 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_012800 IPR005467 Histidine kinase domain ABE28_012800 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_012800 IPR035965 PAS domain superfamily ABE28_012800 IPR000014 PAS domain ABE28_012800 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_012800 IPR013767 PAS fold ABE28_012800 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012805 IPR003740 Uncharacterised membrane protein YitT ABE28_012805 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_012805 IPR019264 Domain of unknown function DUF2179 ABE28_012820 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012820 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012820 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ABE28_012820 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012820 IPR011545 DEAD/DEAH box helicase domain ABE28_012820 IPR004589 DNA helicase, ATP-dependent, RecQ type ABE28_012820 IPR002121 HRDC domain ABE28_012820 IPR010997 HRDC-like superfamily ABE28_012820 IPR018982 RQC domain ABE28_012820 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial ABE28_012820 IPR001650 Helicase, C-terminal ABE28_012820 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_012825 IPR018392 LysM domain ABE28_012825 IPR010611 3D domain ABE28_012825 IPR036908 RlpA-like domain superfamily ABE28_012825 IPR036779 LysM domain superfamily ABE28_012830 IPR020256 Spore coat protein CotJA ABE28_012835 IPR016571 Spore coat assembly protein CotJB ABE28_012835 IPR024207 Spore coat assembly protein CotJB, domain ABE28_012840 IPR012347 Ferritin-like ABE28_012840 IPR007760 Manganese catalase ABE28_012840 IPR039377 Manganese catalase, ferritin-like di-iron-binding domain ABE28_012840 IPR009078 Ferritin-like superfamily ABE28_012845 IPR014464 Conserved virulence factor B ABE28_012845 IPR039566 Conserved virulence factor B, S1 domain ABE28_012845 IPR040764 Conserved virulence factor B-like, winged helix domain ABE28_012845 IPR012340 Nucleic acid-binding, OB-fold ABE28_012845 IPR022967 RNA-binding domain, S1 ABE28_012845 IPR003029 S1 domain ABE28_012845 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012850 IPR003660 HAMP domain ABE28_012850 IPR001610 PAC motif ABE28_012850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_012850 IPR000014 PAS domain ABE28_012850 IPR035965 PAS domain superfamily ABE28_012850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_012850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_012850 IPR005467 Histidine kinase domain ABE28_012850 IPR000700 PAS-associated, C-terminal ABE28_012850 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012855 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012855 IPR039420 Transcriptional regulatory protein WalR-like ABE28_012855 IPR001789 Signal transduction response regulator, receiver domain ABE28_012855 IPR011006 CheY-like superfamily ABE28_012855 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_012860 IPR011006 CheY-like superfamily ABE28_012860 IPR001789 Signal transduction response regulator, receiver domain ABE28_012860 IPR029787 Nucleotide cyclase ABE28_012860 IPR000160 GGDEF domain ABE28_012885 IPR027785 UvrD-like helicase C-terminal domain ABE28_012885 IPR000212 DNA helicase, UvrD/REP type ABE28_012885 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012885 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_012895 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012895 IPR032781 ABC-transporter extension domain ABE28_012895 IPR003593 AAA+ ATPase domain ABE28_012895 IPR003439 ABC transporter-like ABE28_012905 IPR027705 Flotillin family ABE28_012905 IPR031905 Flotillin, C-terminal domain ABE28_012905 IPR036013 Band 7/SPFH domain superfamily ABE28_012905 IPR001107 Band 7 domain ABE28_012915 IPR003784 BioY protein ABE28_012925 IPR005744 Hly-III ABE28_012925 IPR004254 AdipoR/Haemolysin-III-related ABE28_012930 IPR001845 HTH ArsR-type DNA-binding domain ABE28_012930 IPR011991 ArsR-like helix-turn-helix domain ABE28_012930 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012930 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012935 IPR011105 Cell wall hydrolase, SleB ABE28_012935 IPR042047 Cell wall hydrolase SleB, domain 1 ABE28_012945 IPR035917 YjbQ-like superfamily ABE28_012945 IPR001602 Uncharacterised protein family UPF0047 ABE28_012955 IPR036095 PTS system IIB component-like superfamily ABE28_012955 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_012955 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_012955 IPR002178 PTS EIIA type-2 domain ABE28_012955 IPR016152 Phosphotransferase/anion transporter ABE28_012955 IPR004715 Phosphotransferase system, IIA component fructose subfamily ABE28_012955 IPR003353 Phosphotransferase system, fructose-specific IIB subunit ABE28_012955 IPR006327 Phosphotransferase system, fructose IIC component ABE28_012955 IPR013014 Phosphotransferase system, EIIC component, type 2 ABE28_012960 IPR022463 Fructose 1-phosphate kinase ABE28_012960 IPR017583 Tagatose/fructose phosphokinase ABE28_012960 IPR029056 Ribokinase-like ABE28_012960 IPR011611 Carbohydrate kinase PfkB ABE28_012960 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_012965 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ABE28_012965 IPR014036 DeoR C-terminal sensor domain ABE28_012965 IPR001034 DeoR-type HTH domain ABE28_012965 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012965 IPR037171 NagB/RpiA transferase-like ABE28_012970 IPR036625 E3-binding domain superfamily ABE28_012970 IPR000089 Biotin/lipoyl attachment ABE28_012970 IPR011053 Single hybrid motif ABE28_012970 IPR004167 Peripheral subunit-binding domain ABE28_012970 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ABE28_012970 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ABE28_012970 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ABE28_012970 IPR006255 Dihydrolipoamide succinyltransferase ABE28_012975 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal ABE28_012975 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial ABE28_012975 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_012975 IPR029061 Thiamin diphosphate-binding fold ABE28_012975 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily ABE28_012975 IPR011603 2-oxoglutarate dehydrogenase E1 component ABE28_012975 IPR001017 Dehydrogenase, E1 component ABE28_012980 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type ABE28_012980 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B ABE28_012985 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_012985 IPR033119 Glycoside hydrolase family 11, active site 2 ABE28_012985 IPR033123 Glycosyl hydrolases family 11 (GH11) domain ABE28_012985 IPR018208 Glycoside hydrolase family 11, active site 1 ABE28_012985 IPR013319 Glycoside hydrolase family 11/12 ABE28_012985 IPR005084 Carbohydrate binding module family 6 ABE28_012985 IPR002509 NodB homology domain ABE28_012985 IPR008979 Galactose-binding-like domain superfamily ABE28_012985 IPR001137 Glycoside hydrolase family 11 ABE28_012985 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_012990 IPR004223 Vitamin B12-dependent methionine synthase, activation domain ABE28_012990 IPR006158 Cobalamin (vitamin B12)-binding domain ABE28_012990 IPR036724 Cobalamin-binding domain superfamily ABE28_012990 IPR011005 Dihydropteroate synthase-like ABE28_012990 IPR003726 Homocysteine-binding domain ABE28_012990 IPR036589 Homocysteine-binding domain superfamily ABE28_012990 IPR033706 Methionine synthase, B12-binding domain ABE28_012990 IPR011822 Cobalamin-dependent methionine synthase ABE28_012990 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ABE28_012990 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily ABE28_012990 IPR036594 Methionine synthase domain ABE28_012990 IPR000489 Pterin-binding domain ABE28_012995 IPR029041 FAD-linked oxidoreductase-like ABE28_012995 IPR003726 Homocysteine-binding domain ABE28_012995 IPR036589 Homocysteine-binding domain superfamily ABE28_012995 IPR003171 Methylenetetrahydrofolate reductase ABE28_013000 IPR005302 Molybdenum cofactor sulfurase, C-terminal ABE28_013000 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_013000 IPR005163 3-alpha domain ABE28_013005 IPR016194 SPOC-like, C-terminal domain superfamily ABE28_013005 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ABE28_013005 IPR006164 Ku70/Ku80 beta-barrel domain ABE28_013010 IPR012310 DNA ligase, ATP-dependent, central ABE28_013010 IPR033652 LigD polymerase domain, type 3 ABE28_013010 IPR014145 DNA ligase D, polymerase domain ABE28_013010 IPR014143 DNA ligase D ABE28_013010 IPR014146 DNA ligase D, ligase domain ABE28_013015 IPR001653 Diaminopimelate epimerase, DapF ABE28_013015 IPR018510 Diaminopimelate epimerase, active site ABE28_013020 IPR006043 Xanthine/uracil/vitamin C permease ABE28_013025 IPR001765 Carbonic anhydrase ABE28_013025 IPR036874 Carbonic anhydrase superfamily ABE28_013045 IPR003824 Undecaprenyl-diphosphatase UppP ABE28_013055 IPR005538 LrgA/CidA family ABE28_013055 IPR023760 Holin-like protein CidA ABE28_013060 IPR007300 CidB/LrgB family ABE28_013060 IPR005261 Conserved hypothetical protein CHP00659 ABE28_013065 IPR004276 Glycosyltransferase family 28, N-terminal domain ABE28_013065 IPR006009 N-acetylglucosaminyltransferase, MurG ABE28_013065 IPR007235 Glycosyl transferase, family 28, C-terminal ABE28_013070 IPR006686 Mechanosensitive ion channel MscS, conserved site ABE28_013070 IPR011066 Mechanosensitive ion channel MscS, C-terminal ABE28_013070 IPR006685 Mechanosensitive ion channel MscS ABE28_013070 IPR010920 LSM domain superfamily ABE28_013070 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ABE28_013070 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_013075 IPR002528 Multi antimicrobial extrusion protein ABE28_013080 IPR036291 NAD(P)-binding domain superfamily ABE28_013080 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013090 IPR035940 CAP superfamily ABE28_013090 IPR014044 CAP domain ABE28_013090 IPR014258 CAP domain, YkwD-like ABE28_013100 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013100 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013100 IPR005467 Histidine kinase domain ABE28_013100 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_013100 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_013100 IPR000014 PAS domain ABE28_013100 IPR031967 PhoR, single Cache-like domain ABE28_013100 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_013100 IPR013767 PAS fold ABE28_013100 IPR035965 PAS domain superfamily ABE28_013105 IPR011006 CheY-like superfamily ABE28_013105 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_013105 IPR039420 Transcriptional regulatory protein WalR-like ABE28_013105 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013105 IPR001789 Signal transduction response regulator, receiver domain ABE28_013125 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013125 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_013125 IPR036627 CobW-like, C-terminal domain superfamily ABE28_013125 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABE28_013130 IPR011051 RmlC-like cupin domain superfamily ABE28_013130 IPR014710 RmlC-like jelly roll fold ABE28_013130 IPR023956 Acireductone dioxygenase ARD, bacteria ABE28_013130 IPR004313 Acireductone dioxygenase ARD family ABE28_013135 IPR017714 Methylthioribulose-1-phosphate dehydratase ABE28_013135 IPR001303 Class II aldolase/adducin N-terminal ABE28_013135 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABE28_013140 IPR006384 Pyridoxal phosphate phosphatase-related ABE28_013140 IPR023214 HAD superfamily ABE28_013140 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase ABE28_013140 IPR036412 HAD-like superfamily ABE28_013145 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily ABE28_013145 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal ABE28_013145 IPR033966 RuBisCO ABE28_013145 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase ABE28_013145 IPR036422 RuBisCO large subunit, N-terminal domain superfamily ABE28_013145 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal ABE28_013150 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_013150 IPR004839 Aminotransferase, class I/classII ABE28_013150 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_013150 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_013155 IPR003010 Carbon-nitrogen hydrolase ABE28_013155 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_013160 IPR009212 Methylthioribose kinase ABE28_013160 IPR011009 Protein kinase-like domain superfamily ABE28_013160 IPR002575 Aminoglycoside phosphotransferase ABE28_013165 IPR005251 Methylthioribose-1-phosphate isomerase ABE28_013165 IPR011559 Initiation factor 2B alpha/beta/delta ABE28_013165 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal ABE28_013165 IPR037171 NagB/RpiA transferase-like ABE28_013165 IPR000649 Initiation factor 2B-related ABE28_013175 IPR036366 PGBD superfamily ABE28_013175 IPR001478 PDZ domain ABE28_013175 IPR029045 ClpP/crotonase-like domain superfamily ABE28_013175 IPR036365 PGBD-like superfamily ABE28_013175 IPR005151 Tail specific protease ABE28_013175 IPR036034 PDZ superfamily ABE28_013175 IPR002477 Peptidoglycan binding-like ABE28_013175 IPR041489 PDZ domain 6 ABE28_013175 IPR004447 C-terminal-processing peptidase S41A ABE28_013185 IPR004402 Purine nucleoside phosphorylase DeoD-type ABE28_013185 IPR000845 Nucleoside phosphorylase domain ABE28_013185 IPR035994 Nucleoside phosphorylase superfamily ABE28_013185 IPR018016 Nucleoside phosphorylase, conserved site ABE28_013190 IPR025545 YozD-like protein ABE28_013230 IPR001584 Integrase, catalytic core ABE28_013230 IPR036397 Ribonuclease H superfamily ABE28_013230 IPR012337 Ribonuclease H-like superfamily ABE28_013230 IPR025948 HTH-like domain ABE28_013230 IPR038965 Transposase InsF-like ABE28_013240 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_013240 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013240 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013240 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_013240 IPR005467 Histidine kinase domain ABE28_013240 IPR035965 PAS domain superfamily ABE28_013240 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_013240 IPR000014 PAS domain ABE28_013240 IPR013767 PAS fold ABE28_013245 IPR010673 Protein of unknown function UPF0346 ABE28_013245 IPR036806 YozE SAM-like superfamily ABE28_013245 IPR023089 YozE SAM-like domain ABE28_013250 IPR022453 Zinc finger, MqsA-type ABE28_013250 IPR022451 Conserved hypothetical protein CHP03829, YokU ABE28_013255 IPR013785 Aldolase-type TIM barrel ABE28_013255 IPR025895 Lysine-2,3-aminomutase, C-terminal domain ABE28_013255 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_013255 IPR022459 Lysine-2,3-aminomutase ABE28_013260 IPR035965 PAS domain superfamily ABE28_013260 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_013260 IPR025944 Sigma-54 interaction domain, conserved site ABE28_013260 IPR009057 Homeobox-like domain superfamily ABE28_013260 IPR002197 DNA binding HTH domain, Fis-type ABE28_013260 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013260 IPR003593 AAA+ ATPase domain ABE28_013260 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_013260 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_013260 IPR000014 PAS domain ABE28_013265 IPR022525 Beta-lysine N-acetyltransferase ABE28_013265 IPR000182 GNAT domain ABE28_013265 IPR016181 Acyl-CoA N-acyltransferase ABE28_013270 IPR011650 Peptidase M20, dimerisation domain ABE28_013270 IPR002933 Peptidase M20 ABE28_013270 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_013270 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase ABE28_013275 IPR037171 NagB/RpiA transferase-like ABE28_013275 IPR004165 Coenzyme A transferase family I ABE28_013275 IPR012791 3-oxoacid CoA-transferase, subunit B ABE28_013280 IPR037171 NagB/RpiA transferase-like ABE28_013280 IPR004163 Coenzyme A transferase binding site ABE28_013280 IPR004165 Coenzyme A transferase family I ABE28_013280 IPR012792 3-oxoacid CoA-transferase, subunit A ABE28_013285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_013285 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_013285 IPR005814 Aminotransferase class-III ABE28_013285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_013295 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ABE28_013295 IPR029062 Class I glutamine amidotransferase-like ABE28_013295 IPR040921 LD-carboxypeptidase, C-terminal ABE28_013295 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal ABE28_013295 IPR040449 LD-carboxypeptidase, N-terminal ABE28_013295 IPR003507 Peptidase family S66 ABE28_013310 IPR028427 Peptide methionine sulfoxide reductase ABE28_013310 IPR002579 Peptide methionine sulphoxide reductase MrsB ABE28_013310 IPR011057 Mss4-like superfamily ABE28_013315 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ABE28_013315 IPR002569 Peptide methionine sulphoxide reductase MsrA ABE28_013325 IPR018672 Protein of unknown function DUF2140 ABE28_013335 IPR036249 Thioredoxin-like superfamily ABE28_013335 IPR013766 Thioredoxin domain ABE28_013335 IPR003782 Copper chaperone SCO1/SenC ABE28_013340 IPR003797 DegV ABE28_013350 IPR019820 Sec-independent periplasmic protein translocase, conserved site ABE28_013350 IPR002033 Sec-independent periplasmic protein translocase TatC ABE28_013355 IPR006312 Sec-independent protein translocase protein TatA/E ABE28_013355 IPR003369 Sec-independent protein translocase protein TatA/B/E ABE28_013360 IPR011820 L-threonine dehydratase biosynthetic IlvA ABE28_013360 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_013360 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ABE28_013360 IPR001721 Threonine dehydratase, ACT-like domain ABE28_013360 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_013365 IPR012259 Dihydrofolate reductase ABE28_013365 IPR001796 Dihydrofolate reductase domain ABE28_013365 IPR024072 Dihydrofolate reductase-like domain superfamily ABE28_013365 IPR017925 Dihydrofolate reductase conserved site ABE28_013370 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain ABE28_013370 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily ABE28_013370 IPR000398 Thymidylate synthase ABE28_013370 IPR020940 Thymidylate synthase, active site ABE28_013375 IPR024079 Metallopeptidase, catalytic domain superfamily ABE28_013385 IPR024072 Dihydrofolate reductase-like domain superfamily ABE28_013385 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal ABE28_013390 IPR022493 Integral membrane YkoY ABE28_013390 IPR005496 Integral membrane protein TerC ABE28_013395 IPR025616 YpjP-like protein ABE28_013400 IPR000101 Gamma-glutamyltranspeptidase ABE28_013400 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_013405 IPR007536 Ribosomal RNA small subunit methyltransferase J ABE28_013405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_013410 IPR036249 Thioredoxin-like superfamily ABE28_013410 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_013425 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase ABE28_013425 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site ABE28_013425 IPR042096 Dihydroxy-acid dehydratase, C-terminal ABE28_013425 IPR004404 Dihydroxy-acid dehydratase ABE28_013425 IPR037237 IlvD/EDD, N-terminal domain ABE28_013430 IPR025989 Virulence factor domain ABE28_013430 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily ABE28_013430 IPR014824 Scaffold protein Nfu/NifU, N-terminal ABE28_013430 IPR016024 Armadillo-type fold ABE28_013430 IPR011989 Armadillo-like helical ABE28_013430 IPR004155 PBS lyase HEAT-like repeat ABE28_013435 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ABE28_013435 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013435 IPR017871 ABC transporter, conserved site ABE28_013435 IPR003439 ABC transporter-like ABE28_013435 IPR032781 ABC-transporter extension domain ABE28_013435 IPR032524 ABC transporter Uup, C-terminal ABE28_013435 IPR003593 AAA+ ATPase domain ABE28_013440 IPR003607 HD/PDEase domain ABE28_013440 IPR006674 HD domain ABE28_013445 IPR003797 DegV ABE28_013450 IPR000889 Glutathione peroxidase ABE28_013450 IPR029759 Glutathione peroxidase active site ABE28_013450 IPR029760 Glutathione peroxidase conserved site ABE28_013450 IPR036249 Thioredoxin-like superfamily ABE28_013460 IPR005697 Homoserine O-succinyltransferase MetA ABE28_013460 IPR033752 MetA family ABE28_013460 IPR029062 Class I glutamine amidotransferase-like ABE28_013470 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_013470 IPR004033 UbiE/COQ5 methyltransferase ABE28_013470 IPR023576 UbiE/COQ5 methyltransferase, conserved site ABE28_013480 IPR022687 DTXR-type HTH domain ABE28_013480 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013480 IPR022689 Iron dependent repressor ABE28_013480 IPR022897 HTH-type transcription regulator MntR ABE28_013480 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily ABE28_013480 IPR001367 Iron dependent repressor, metal binding and dimerisation domain ABE28_013480 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013495 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_013495 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_013495 IPR029503 Phosphotransferase system EIIB component, mannitol-specific ABE28_013495 IPR003352 Phosphotransferase system, EIIC ABE28_013495 IPR013014 Phosphotransferase system, EIIC component, type 2 ABE28_013495 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC ABE28_013495 IPR036095 PTS system IIB component-like superfamily ABE28_013500 IPR016152 Phosphotransferase/anion transporter ABE28_013500 IPR002178 PTS EIIA type-2 domain ABE28_013505 IPR013118 Mannitol dehydrogenase, C-terminal ABE28_013505 IPR023027 Mannitol dehydrogenase, conserved site ABE28_013505 IPR013131 Mannitol dehydrogenase, N-terminal ABE28_013505 IPR036291 NAD(P)-binding domain superfamily ABE28_013505 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_013505 IPR000669 Mannitol dehydrogenase ABE28_013505 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_013505 IPR023028 Mannitol-1-phosphate 5-dehydrogenase ABE28_013510 IPR017552 3-hexulose-6-phosphate isomerase ABE28_013510 IPR001347 Sugar isomerase (SIS) ABE28_013515 IPR026019 Ribulose-phosphate 3-epimerase ABE28_013515 IPR013785 Aldolase-type TIM barrel ABE28_013515 IPR000056 Ribulose-phosphate 3-epimerase-like ABE28_013515 IPR011060 Ribulose-phosphate binding barrel ABE28_013520 IPR037171 NagB/RpiA transferase-like ABE28_013520 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ABE28_013520 IPR001034 DeoR-type HTH domain ABE28_013520 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013520 IPR014036 DeoR C-terminal sensor domain ABE28_013520 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013530 IPR007837 DNA damage-inducible protein DinB ABE28_013530 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_013550 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_013550 IPR038300 SASP, alpha/beta-type superfamily ABE28_013550 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_013555 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_013555 IPR015590 Aldehyde dehydrogenase domain ABE28_013555 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_013555 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_013555 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_013555 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_013565 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_013565 IPR035906 MetI-like superfamily ABE28_013570 IPR035906 MetI-like superfamily ABE28_013570 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_013580 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_013580 IPR028082 Periplasmic binding protein-like I ABE28_013580 IPR000843 LacI-type HTH domain ABE28_013585 IPR005927 Tagatose 1,6-diphosphate aldolase ABE28_013585 IPR002915 DeoC/FbaB/ lacD aldolase ABE28_013585 IPR013785 Aldolase-type TIM barrel ABE28_013590 IPR005926 Tagatose-6-phosphate kinase ABE28_013590 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_013590 IPR017583 Tagatose/fructose phosphokinase ABE28_013590 IPR029056 Ribokinase-like ABE28_013590 IPR011611 Carbohydrate kinase PfkB ABE28_013595 IPR014180 Sugar isomerase, AgaS ABE28_013595 IPR035464 AgaS, SIS domain ABE28_013595 IPR001347 Sugar isomerase (SIS) ABE28_013595 IPR035466 GlmS/AgaS, SIS domain 1 ABE28_013600 IPR000600 ROK family ABE28_013600 IPR004654 Glucokinase ROK ABE28_013605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_013605 IPR035906 MetI-like superfamily ABE28_013615 IPR006059 Bacterial extracellular solute-binding protein ABE28_013615 IPR006061 Solute-binding family 1, conserved site ABE28_013625 IPR028082 Periplasmic binding protein-like I ABE28_013625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_013625 IPR000843 LacI-type HTH domain ABE28_013640 IPR000600 ROK family ABE28_013640 IPR004654 Glucokinase ROK ABE28_013650 IPR016446 Flavin oxidoreductase Frp family ABE28_013650 IPR029479 Nitroreductase ABE28_013650 IPR000415 Nitroreductase-like ABE28_013660 IPR009057 Homeobox-like domain superfamily ABE28_013660 IPR000281 Helix-turn-helix protein RpiR ABE28_013660 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013660 IPR001347 Sugar isomerase (SIS) ABE28_013660 IPR035472 RpiR-like, SIS domain ABE28_013665 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type ABE28_013675 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit ABE28_013675 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily ABE28_013680 IPR019802 Glycoside hydrolase, family 4, conserved site ABE28_013680 IPR001088 Glycoside hydrolase, family 4 ABE28_013680 IPR022616 Glycosyl hydrolase, family 4, C-terminal ABE28_013680 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ABE28_013680 IPR036291 NAD(P)-binding domain superfamily ABE28_013690 IPR003352 Phosphotransferase system, EIIC ABE28_013690 IPR004501 Phosphotransferase system, EIIC component, type 3 ABE28_013690 IPR004796 Phosphotransferase system, cellobiose-type IIC component ABE28_013700 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein ABE28_013700 IPR005486 Glucokinase regulatory protein, conserved site ABE28_013700 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ ABE28_013700 IPR001347 Sugar isomerase (SIS) ABE28_013705 IPR013785 Aldolase-type TIM barrel ABE28_013705 IPR003790 Glycosyl hydrolase-like 10 ABE28_013705 IPR017853 Glycoside hydrolase superfamily ABE28_013705 IPR013783 Immunoglobulin-like fold ABE28_013710 IPR005338 Anhydro-N-acetylmuramic acid kinase ABE28_013715 IPR004841 Amino acid permease/ SLC12A domain ABE28_013715 IPR004840 Amino acid permease, conserved site ABE28_013720 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_013720 IPR011650 Peptidase M20, dimerisation domain ABE28_013720 IPR002933 Peptidase M20 ABE28_013720 IPR017439 Amidohydrolase ABE28_013725 IPR018385 C4-dicarboxylate anaerobic carrier-like ABE28_013730 IPR002933 Peptidase M20 ABE28_013730 IPR012166 Uncharacterised protein family RocB ABE28_013735 IPR033199 Dimethylarginine dimethylaminohydrolase ABE28_013745 IPR029016 GAF-like domain superfamily ABE28_013745 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013745 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013745 IPR014757 Transcription regulator IclR, C-terminal ABE28_013745 IPR005471 Transcription regulator IclR, N-terminal ABE28_013755 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ABE28_013755 IPR036291 NAD(P)-binding domain superfamily ABE28_013755 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ABE28_013755 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ABE28_013755 IPR033524 Leu/Phe/Val dehydrogenases active site ABE28_013755 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ABE28_013755 IPR014362 Glutamate dehydrogenase ABE28_013760 IPR011060 Ribulose-phosphate binding barrel ABE28_013760 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase ABE28_013760 IPR013785 Aldolase-type TIM barrel ABE28_013765 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component ABE28_013770 IPR004720 Phosphotransferase system, sorbose subfamily IIB component ABE28_013770 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily ABE28_013770 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup ABE28_013780 IPR000281 Helix-turn-helix protein RpiR ABE28_013780 IPR009057 Homeobox-like domain superfamily ABE28_013780 IPR035472 RpiR-like, SIS domain ABE28_013780 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013780 IPR001347 Sugar isomerase (SIS) ABE28_013785 IPR004841 Amino acid permease/ SLC12A domain ABE28_013790 IPR023696 Ureohydrolase domain superfamily ABE28_013790 IPR006035 Ureohydrolase ABE28_013790 IPR005925 Agmatinase-related ABE28_013790 IPR020855 Ureohydrolase, manganese-binding site ABE28_013795 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_013795 IPR002110 Ankyrin repeat ABE28_013795 IPR020683 Ankyrin repeat-containing domain ABE28_013800 IPR011006 CheY-like superfamily ABE28_013800 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013800 IPR039420 Transcriptional regulatory protein WalR-like ABE28_013800 IPR001789 Signal transduction response regulator, receiver domain ABE28_013800 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_013805 IPR003660 HAMP domain ABE28_013805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_013805 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013805 IPR035965 PAS domain superfamily ABE28_013805 IPR000700 PAS-associated, C-terminal ABE28_013805 IPR000014 PAS domain ABE28_013805 IPR001610 PAC motif ABE28_013805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_013805 IPR005467 Histidine kinase domain ABE28_013805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_013810 IPR002937 Amine oxidase ABE28_013810 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013810 IPR014105 Carotenoid/retinoid oxidoreductase ABE28_013815 IPR019845 Squalene/phytoene synthase, conserved site ABE28_013815 IPR008949 Isoprenoid synthase domain superfamily ABE28_013815 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head ABE28_013820 IPR014105 Carotenoid/retinoid oxidoreductase ABE28_013820 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013820 IPR002937 Amine oxidase ABE28_013850 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_013850 IPR000965 GPR domain ABE28_013850 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_013850 IPR015590 Aldehyde dehydrogenase domain ABE28_013850 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_013850 IPR012134 Glutamate-5-semialdehyde dehydrogenase ABE28_013850 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site ABE28_013855 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase ABE28_013855 IPR036393 Acetylglutamate kinase-like superfamily ABE28_013855 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_013855 IPR036974 PUA domain superfamily ABE28_013855 IPR019797 Glutamate 5-kinase, conserved site ABE28_013855 IPR002478 PUA domain ABE28_013855 IPR041739 Glutamate-5-kinase domain ABE28_013855 IPR001057 Glutamate/acetylglutamate kinase ABE28_013855 IPR011529 Glutamate 5-kinase ABE28_013855 IPR015947 PUA-like superfamily ABE28_013865 IPR012292 Globin/Protoglobin ABE28_013865 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain ABE28_013865 IPR017927 FAD-binding domain, ferredoxin reductase-type ABE28_013865 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ABE28_013865 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_013865 IPR000971 Globin ABE28_013865 IPR009050 Globin-like superfamily ABE28_013865 IPR001433 Oxidoreductase FAD/NAD(P)-binding ABE28_013865 IPR023950 Flavohemoprotein ABE28_013865 IPR017938 Riboflavin synthase-like beta-barrel ABE28_013870 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_013870 IPR000944 Transcription regulator Rrf2-type ABE28_013870 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013870 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013875 IPR006675 HDIG domain ABE28_013875 IPR037522 HD-GYP domain ABE28_013875 IPR003607 HD/PDEase domain ABE28_013875 IPR006674 HD domain ABE28_013880 IPR019718 Protein of unknown function DUF2602 ABE28_013885 IPR036397 Ribonuclease H superfamily ABE28_013885 IPR002156 Ribonuclease H domain ABE28_013885 IPR012337 Ribonuclease H-like superfamily ABE28_013890 IPR012337 Ribonuclease H-like superfamily ABE28_013890 IPR036397 Ribonuclease H superfamily ABE28_013890 IPR002156 Ribonuclease H domain ABE28_013905 IPR038969 Flap endonuclease ABE28_013905 IPR020045 DNA polymerase I-like, H3TH domain ABE28_013905 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABE28_013905 IPR002421 5'-3' exonuclease, N-terminal ABE28_013905 IPR029060 PIN-like domain superfamily ABE28_013905 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal ABE28_013905 IPR008918 Helix-hairpin-helix motif, class 2 ABE28_013910 IPR001763 Rhodanese-like domain ABE28_013910 IPR036873 Rhodanese-like domain superfamily ABE28_013920 IPR027094 Mitofusin family ABE28_013920 IPR022812 Dynamin superfamily ABE28_013920 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013925 IPR007269 Isoprenylcysteine carboxyl methyltransferase ABE28_013930 IPR016039 Thiolase-like ABE28_013930 IPR011141 Polyketide synthase, type III ABE28_013930 IPR001099 Chalcone/stilbene synthase, N-terminal ABE28_013930 IPR018088 Chalcone/stilbene synthase, active site ABE28_013930 IPR012328 Chalcone/stilbene synthase, C-terminal ABE28_013940 IPR006043 Xanthine/uracil/vitamin C permease ABE28_013940 IPR006042 Xanthine/uracil permease ABE28_013940 IPR017588 Uric acid permease UacT-like ABE28_013945 IPR000836 Phosphoribosyltransferase domain ABE28_013945 IPR029057 Phosphoribosyltransferase-like ABE28_013945 IPR010079 Xanthine phosphoribosyltransferase ABE28_013950 IPR001333 Peptidase M32, carboxypeptidase Taq ABE28_013955 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type ABE28_013955 IPR006555 ATP-dependent helicase, C-terminal ABE28_013955 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013965 IPR002059 Cold-shock protein, DNA-binding ABE28_013965 IPR019844 Cold-shock (CSD) domain ABE28_013965 IPR012340 Nucleic acid-binding, OB-fold ABE28_013965 IPR012156 Cold shock, CspA ABE28_013965 IPR011129 Cold shock domain ABE28_013970 IPR004114 THUMP domain ABE28_013970 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_013970 IPR000241 Putative RNA methylase domain ABE28_013970 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ABE28_013985 IPR011229 Cell cycle protein GpsB ABE28_013985 IPR007793 DivIVA family ABE28_013985 IPR019933 DivIVA domain ABE28_013990 IPR010697 YspA SLOG family ABE28_013995 IPR020108 Spore coat protein CotD ABE28_014000 IPR012337 Ribonuclease H-like superfamily ABE28_014000 IPR011990 Tetratricopeptide-like helical domain superfamily ABE28_014000 IPR038720 YprB, ribonuclease H-like domain ABE28_014005 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014005 IPR001650 Helicase, C-terminal ABE28_014005 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014005 IPR018973 DEAD/DEAH-box helicase, putative ABE28_014005 IPR011545 DEAD/DEAH box helicase domain ABE28_014010 IPR019913 Pyrimidine utilisation protein RutD ABE28_014010 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 IPR029058 Alpha/Beta hydrolase fold ABE28_014015 IPR002068 Alpha crystallin/Hsp20 domain ABE28_014015 IPR008978 HSP20-like chaperone ABE28_014035 IPR019658 Protein of unknown function DUF2515 ABE28_014040 IPR011856 tRNA endonuclease-like domain superfamily ABE28_014040 IPR011335 Restriction endonuclease type II-like ABE28_014040 IPR004612 Holliday junction resolvase RecU ABE28_014045 IPR001460 Penicillin-binding protein, transpeptidase ABE28_014045 IPR036950 Penicillin binding protein transglycosylase domain ABE28_014045 IPR023346 Lysozyme-like domain superfamily ABE28_014045 IPR001264 Glycosyl transferase, family 51 ABE28_014045 IPR036116 Fibronectin type III superfamily ABE28_014045 IPR003961 Fibronectin type III ABE28_014045 IPR013783 Immunoglobulin-like fold ABE28_014045 IPR012338 Beta-lactamase/transpeptidase-like ABE28_014055 IPR004035 Endonuclease III, iron-sulphur binding site ABE28_014055 IPR003265 HhH-GPD domain ABE28_014055 IPR005759 Endonuclease III ABE28_014055 IPR011257 DNA glycosylase ABE28_014055 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif ABE28_014055 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal ABE28_014055 IPR004036 Endonuclease III-like, conserved site-2 ABE28_014055 IPR000445 Helix-hairpin-helix motif ABE28_014060 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014060 IPR006343 DnaD domain ABE28_014060 IPR034829 DnaD-like domain superfamily ABE28_014065 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ABE28_014065 IPR012340 Nucleic acid-binding, OB-fold ABE28_014065 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ABE28_014065 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ABE28_014065 IPR004522 Asparagine-tRNA ligase ABE28_014065 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_014070 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_014070 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit ABE28_014070 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit ABE28_014070 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_014075 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit ABE28_014075 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit ABE28_014075 IPR011234 Fumarylacetoacetase-like, C-terminal ABE28_014075 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily ABE28_014085 IPR024674 HpaB/PvcC/4-BUDH N-terminal ABE28_014085 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_014085 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_014085 IPR024719 HpaB/PvcC/4-BUDH C-terminal ABE28_014085 IPR004925 HpaB/PvcC/4-BUDH ABE28_014085 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type ABE28_014090 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_014090 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_014090 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014095 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_014095 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_014095 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase ABE28_014095 IPR015590 Aldehyde dehydrogenase domain ABE28_014095 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_014095 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_014095 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_014100 IPR013785 Aldolase-type TIM barrel ABE28_014100 IPR020625 Schiff base-forming aldolase, active site ABE28_014100 IPR020624 Schiff base-forming aldolase, conserved site ABE28_014100 IPR002220 DapA-like ABE28_014100 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA ABE28_014110 IPR004839 Aminotransferase, class I/classII ABE28_014110 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ABE28_014110 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_014110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_014110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_014115 IPR041401 Domain of unknown function DUF5590 ABE28_014115 IPR025711 PepSY domain ABE28_014120 IPR012190 Uncharacterised conserved protein UCP036698, YpmA ABE28_014125 IPR006555 ATP-dependent helicase, C-terminal ABE28_014125 IPR006310 3'-5' exonuclease DinG ABE28_014125 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain ABE28_014125 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_014125 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type ABE28_014125 IPR006935 Helicase/UvrB, N-terminal ABE28_014125 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014125 IPR001650 Helicase, C-terminal ABE28_014125 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014125 IPR012337 Ribonuclease H-like superfamily ABE28_014125 IPR036397 Ribonuclease H superfamily ABE28_014130 IPR003190 Aspartate decarboxylase ABE28_014130 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_014135 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_014135 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain ABE28_014135 IPR004821 Cytidyltransferase-like domain ABE28_014135 IPR003721 Pantoate-beta-alanine ligase ABE28_014140 IPR040442 Pyruvate kinase-like domain superfamily ABE28_014140 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_014140 IPR003700 Ketopantoate hydroxymethyltransferase ABE28_014145 IPR030855 Bifunctional ligase/repressor BirA ABE28_014145 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014145 IPR008988 Transcriptional repressor, C-terminal ABE28_014145 IPR013196 Helix-turn-helix, type 11 ABE28_014145 IPR004408 Biotin--acetyl-CoA-carboxylase ligase ABE28_014145 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014145 IPR003142 Biotin protein ligase, C-terminal ABE28_014145 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ABE28_014145 IPR004409 Biotin operon repressor, helix-turn-helix domain ABE28_014150 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain ABE28_014150 IPR023068 CCA-adding enzyme, firmicutes ABE28_014150 IPR032810 CCA-adding enzyme, C-terminal ABE28_014150 IPR002646 Poly A polymerase, head domain ABE28_014155 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA ABE28_014155 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ABE28_014155 IPR001296 Glycosyl transferase, family 1 ABE28_014160 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ABE28_014160 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 ABE28_014160 IPR024078 Putative deacetylase LmbE-like domain superfamily ABE28_014165 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_014165 IPR004363 Methylglyoxal synthase ABE28_014165 IPR018148 Methylglyoxal synthase, active site ABE28_014165 IPR011607 Methylglyoxal synthase-like domain ABE28_014170 IPR022663 Dihydrodipicolinate reductase, C-terminal ABE28_014170 IPR022664 Dihydrodipicolinate reductase, conserved site ABE28_014170 IPR000846 Dihydrodipicolinate reductase, N-terminal ABE28_014170 IPR023940 Dihydrodipicolinate reductase ABE28_014170 IPR036291 NAD(P)-binding domain superfamily ABE28_014175 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_014175 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD ABE28_014180 IPR019264 Domain of unknown function DUF2179 ABE28_014180 IPR003740 Uncharacterised membrane protein YitT ABE28_014180 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_014185 IPR007395 Putative neutral zinc metallopeptidase ABE28_014190 IPR014231 Sporulation protein YpjB ABE28_014195 IPR009845 Protein of unknown function DUF1405 ABE28_014200 IPR036909 Cytochrome c-like domain superfamily ABE28_014200 IPR005798 Cytochrome b/b6, C-terminal ABE28_014200 IPR027387 Cytochrome b/b6-like domain superfamily ABE28_014200 IPR009056 Cytochrome c-like domain ABE28_014200 IPR036150 Cytochrome b/b6, C-terminal domain superfamily ABE28_014200 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit ABE28_014205 IPR027387 Cytochrome b/b6-like domain superfamily ABE28_014205 IPR005797 Cytochrome b/b6, N-terminal ABE28_014205 IPR016174 Di-haem cytochrome, transmembrane ABE28_014210 IPR017941 Rieske [2Fe-2S] iron-sulphur domain ABE28_014210 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_014210 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily ABE28_014210 IPR014349 Rieske iron-sulphur protein ABE28_014215 IPR019615 Protein of unknown function DUF2487 ABE28_014220 IPR038091 UPF0302, N-terminal domain superfamily ABE28_014220 IPR014963 Uncharacterised domain UPF0302, N-terminal ABE28_014220 IPR011188 Uncharacterised protein family UPF0302 ABE28_014220 IPR014957 IDEAL domain ABE28_014220 IPR027393 Virus scaffolding protein, C-terminal ABE28_014225 IPR011990 Tetratricopeptide-like helical domain superfamily ABE28_014225 IPR013026 Tetratricopeptide repeat-containing domain ABE28_014225 IPR019734 Tetratricopeptide repeat ABE28_014230 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase ABE28_014230 IPR036968 Enolpyruvate transferase domain superfamily ABE28_014230 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ABE28_014230 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site ABE28_014230 IPR001986 Enolpyruvate transferase domain ABE28_014235 IPR036291 NAD(P)-binding domain superfamily ABE28_014235 IPR002912 ACT domain ABE28_014235 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_014235 IPR003099 Prephenate dehydrogenase ABE28_014240 IPR005861 Histidinol-phosphate aminotransferase family ABE28_014240 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_014240 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_014240 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ABE28_014240 IPR004839 Aminotransferase, class I/classII ABE28_014240 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_014245 IPR008243 Chorismate mutase, AroH class ABE28_014245 IPR035959 RutC-like superfamily ABE28_014250 IPR030960 3-dehydroquinate synthase domain ABE28_014250 IPR030963 3-dehydroquinate synthase family ABE28_014250 IPR016037 3-dehydroquinate synthase AroB ABE28_014255 IPR020541 Chorismate synthase, conserved site ABE28_014255 IPR035904 Chorismate synthase AroC superfamily ABE28_014255 IPR000453 Chorismate synthase ABE28_014260 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014260 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ABE28_014260 IPR000780 MCP methyltransferase, CheR-type ABE28_014260 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ABE28_014265 IPR023005 Nucleoside diphosphate kinase, active site ABE28_014265 IPR001564 Nucleoside diphosphate kinase ABE28_014265 IPR034907 Nucleoside diphosphate kinase-like domain ABE28_014265 IPR036850 Nucleoside diphosphate kinase-like domain superfamily ABE28_014270 IPR033749 Polyprenyl synthetase, conserved site ABE28_014270 IPR000092 Polyprenyl synthetase ABE28_014270 IPR008949 Isoprenoid synthase domain superfamily ABE28_014270 IPR014119 Heptaprenyl diphosphate synthase component II ABE28_014275 IPR004033 UbiE/COQ5 methyltransferase ABE28_014275 IPR023576 UbiE/COQ5 methyltransferase, conserved site ABE28_014275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014275 IPR014122 Demethylmenaquinone methyltransferase ABE28_014280 IPR009920 Heptaprenyl diphosphate synthase subunit 1 ABE28_014285 IPR023558 Tryptophan RNA-binding attenuator protein domain ABE28_014285 IPR000824 Transcription attenuation protein MtrB ABE28_014285 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily ABE28_014290 IPR001474 GTP cyclohydrolase I ABE28_014290 IPR020602 GTP cyclohydrolase I domain ABE28_014290 IPR018234 GTP cyclohydrolase I, conserved site ABE28_014295 IPR020816 Histone-like DNA-binding protein, conserved site ABE28_014295 IPR000119 Histone-like DNA-binding protein ABE28_014295 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily ABE28_014300 IPR014201 Sporulation stage IV, protein A ABE28_014300 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014310 IPR020076 Protein of unknown function DUF2768 ABE28_014315 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_014315 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_014315 IPR005814 Aminotransferase class-III ABE28_014315 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_014315 IPR017747 Putrescine aminotransferase ABE28_014320 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014320 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_014320 IPR000014 PAS domain ABE28_014320 IPR035965 PAS domain superfamily ABE28_014320 IPR025944 Sigma-54 interaction domain, conserved site ABE28_014320 IPR009057 Homeobox-like domain superfamily ABE28_014320 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_014320 IPR013767 PAS fold ABE28_014320 IPR002197 DNA binding HTH domain, Fis-type ABE28_014320 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_014320 IPR036291 NAD(P)-binding domain superfamily ABE28_014320 IPR003593 AAA+ ATPase domain ABE28_014325 IPR004841 Amino acid permease/ SLC12A domain ABE28_014330 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_014330 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_014330 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent ABE28_014330 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal ABE28_014330 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal ABE28_014330 IPR036291 NAD(P)-binding domain superfamily ABE28_014335 IPR005225 Small GTP-binding protein domain ABE28_014335 IPR032859 GTPase Der, C-terminal KH-domain-like ABE28_014335 IPR015946 K homology domain-like, alpha/beta ABE28_014335 IPR031166 EngA-type guanine nucleotide-binding (G) domain ABE28_014335 IPR016484 GTP-binding protein EngA ABE28_014335 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014335 IPR006073 GTP binding domain ABE28_014345 IPR025414 YpzI-like protein ABE28_014350 IPR013785 Aldolase-type TIM barrel ABE28_014350 IPR000262 FMN-dependent dehydrogenase ABE28_014350 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent ABE28_014355 IPR003029 S1 domain ABE28_014355 IPR012340 Nucleic acid-binding, OB-fold ABE28_014355 IPR022967 RNA-binding domain, S1 ABE28_014360 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase ABE28_014360 IPR002123 Phospholipid/glycerol acyltransferase ABE28_014365 IPR011994 Cytidylate kinase domain ABE28_014365 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014365 IPR003136 Cytidylate kinase ABE28_014370 IPR035281 Protein of unknown function DUF5359 ABE28_014380 IPR014239 Spore germination YpeB ABE28_014380 IPR025711 PepSY domain ABE28_014385 IPR014224 Spore cortex-lytic enzyme SleB ABE28_014385 IPR042047 Cell wall hydrolase SleB, domain 1 ABE28_014385 IPR036366 PGBD superfamily ABE28_014385 IPR011105 Cell wall hydrolase, SleB ABE28_014385 IPR036365 PGBD-like superfamily ABE28_014385 IPR002477 Peptidoglycan binding-like ABE28_014390 IPR023596 Peptidase PrsW, archaeal/bacterial ABE28_014390 IPR026898 Intramembrane metalloprotease PrsW ABE28_014395 IPR040919 Asparaginase/glutaminase, C-terminal ABE28_014395 IPR036152 Asparaginase/glutaminase-like superfamily ABE28_014395 IPR027475 Asparaginase/glutaminase, active site 2 ABE28_014395 IPR037152 L-asparaginase, N-terminal domain superfamily ABE28_014395 IPR027474 L-asparaginase, N-terminal ABE28_014395 IPR020827 Asparaginase/glutaminase, active site 1 ABE28_014395 IPR006034 Asparaginase/glutaminase-like ABE28_014395 IPR004550 L-asparaginase, type II ABE28_014395 IPR027473 L-asparaginase, C-terminal ABE28_014400 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA ABE28_014400 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014405 IPR036291 NAD(P)-binding domain superfamily ABE28_014405 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ABE28_014405 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ABE28_014405 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ABE28_014405 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ABE28_014405 IPR033524 Leu/Phe/Val dehydrogenases active site ABE28_014405 IPR014362 Glutamate dehydrogenase ABE28_014410 IPR038471 MecA, C-terminal domain superfamily ABE28_014410 IPR008681 Negative regulator of genetic competence, MecA ABE28_014415 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain ABE28_014415 IPR006158 Cobalamin (vitamin B12)-binding domain ABE28_014415 IPR036724 Cobalamin-binding domain superfamily ABE28_014415 IPR009061 Putative DNA-binding domain superfamily ABE28_014415 IPR036594 Methionine synthase domain ABE28_014415 IPR000551 MerR-type HTH domain ABE28_014420 IPR029052 Metallo-dependent phosphatase-like ABE28_014420 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_014425 IPR020210 Uncharacterised protein family, YpbF, transmembrane ABE28_014430 IPR036779 LysM domain superfamily ABE28_014430 IPR018392 LysM domain ABE28_014435 IPR003675 CAAX prenyl protease 2 ABE28_014440 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014440 IPR001650 Helicase, C-terminal ABE28_014440 IPR004589 DNA helicase, ATP-dependent, RecQ type ABE28_014440 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014440 IPR011545 DEAD/DEAH box helicase domain ABE28_014440 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ABE28_014445 IPR029491 Helicase Helix-turn-helix domain ABE28_014445 IPR008308 Uncharacterised conserved protein UCP021350 ABE28_014445 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014450 IPR001080 3Fe-4S ferredoxin ABE28_014450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_014455 IPR024529 ECF transporter, substrate-specific component ABE28_014455 IPR025720 ECF transporter, Riboflavin transporter RibU ABE28_014460 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ABE28_014460 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_014460 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_014460 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_014460 IPR036291 NAD(P)-binding domain superfamily ABE28_014460 IPR029009 Allosteric substrate binding domain superfamily ABE28_014460 IPR002912 ACT domain ABE28_014460 IPR006236 D-3-phosphoglycerate dehydrogenase ABE28_014470 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014470 IPR039425 RNA polymerase sigma-70 like ABE28_014470 IPR014284 RNA polymerase sigma-70 like domain ABE28_014470 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_014470 IPR007627 RNA polymerase sigma-70 region 2 ABE28_014470 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_014470 IPR013325 RNA polymerase sigma factor, region 2 ABE28_014470 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_014475 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_014475 IPR013767 PAS fold ABE28_014475 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_014475 IPR035965 PAS domain superfamily ABE28_014475 IPR000014 PAS domain ABE28_014475 IPR041328 ResE, histidine kinase sensor domain ABE28_014475 IPR003660 HAMP domain ABE28_014475 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_014475 IPR005467 Histidine kinase domain ABE28_014475 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014475 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_014480 IPR011006 CheY-like superfamily ABE28_014480 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_014480 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014480 IPR039420 Transcriptional regulatory protein WalR-like ABE28_014480 IPR001789 Signal transduction response regulator, receiver domain ABE28_014485 IPR002541 Cytochrome c assembly protein ABE28_014485 IPR017562 Cytochrome c-type biogenesis protein CcsA ABE28_014490 IPR007816 ResB-like domain ABE28_014495 IPR023555 Thiol-disulphide oxidoreductase ResA ABE28_014495 IPR036249 Thioredoxin-like superfamily ABE28_014495 IPR013766 Thioredoxin domain ABE28_014495 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ABE28_014500 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ABE28_014500 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_014500 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_014500 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ABE28_014500 IPR036986 RNA-binding S4 domain superfamily ABE28_014500 IPR002942 RNA-binding S4 domain ABE28_014500 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ABE28_014505 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ABE28_014510 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ABE28_014515 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ABE28_014515 IPR012338 Beta-lactamase/transpeptidase-like ABE28_014515 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ABE28_014515 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal ABE28_014520 IPR005982 Thioredoxin reductase ABE28_014520 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site ABE28_014520 IPR023753 FAD/NAD(P)-binding domain ABE28_014520 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014525 IPR024706 Peroxiredoxin, AhpC-type ABE28_014525 IPR036249 Thioredoxin-like superfamily ABE28_014525 IPR013766 Thioredoxin domain ABE28_014525 IPR017559 Alkyl hydroperoxide reductase subunit C ABE28_014525 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant ABE28_014530 IPR019831 Manganese/iron superoxide dismutase, N-terminal ABE28_014530 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily ABE28_014530 IPR019833 Manganese/iron superoxide dismutase, binding site ABE28_014530 IPR019832 Manganese/iron superoxide dismutase, C-terminal ABE28_014530 IPR001189 Manganese/iron superoxide dismutase ABE28_014530 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily ABE28_014535 IPR025013 Protein of unknown function DUF3907 ABE28_014545 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014545 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014545 IPR005234 Chromosome segregation/condensation protein ScpB ABE28_014550 IPR003768 Segregation and condensation protein A ABE28_014550 IPR023093 ScpA-like, C-terminal ABE28_014555 IPR005500 Protein of unknown function DUF309 ABE28_014555 IPR023203 TTHA0068-like superfamily ABE28_014560 IPR016181 Acyl-CoA N-acyltransferase ABE28_014560 IPR000182 GNAT domain ABE28_014565 IPR009343 Protein of unknown function DUF1002 ABE28_014570 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal ABE28_014570 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ABE28_014570 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal ABE28_014570 IPR002986 Diaminopimelate decarboxylase, LysA ABE28_014570 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal ABE28_014570 IPR029066 PLP-binding barrel ABE28_014570 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABE28_014570 IPR000183 Ornithine/DAP/Arg decarboxylase ABE28_014575 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_014580 IPR025914 Stage V sporulation protein AE ABE28_014585 IPR020144 Stage V sporulation protein AB ABE28_014590 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily ABE28_014590 IPR021997 Stage V sporulation protein AA ABE28_014595 IPR026033 Azaguanine-like transporters ABE28_014595 IPR006043 Xanthine/uracil/vitamin C permease ABE28_014600 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_014600 IPR007627 RNA polymerase sigma-70 region 2 ABE28_014600 IPR000943 RNA polymerase sigma-70 ABE28_014600 IPR014236 RNA polymerase sigma-F type ABE28_014600 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014600 IPR014322 RNA polymerase sigma-B/F/G type ABE28_014600 IPR014284 RNA polymerase sigma-70 like domain ABE28_014600 IPR007630 RNA polymerase sigma-70 region 4 ABE28_014600 IPR007624 RNA polymerase sigma-70 region 3 ABE28_014600 IPR013325 RNA polymerase sigma factor, region 2 ABE28_014605 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_014605 IPR010194 Anti-sigma F factor ABE28_014605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014610 IPR002645 STAS domain ABE28_014610 IPR003658 Anti-sigma factor antagonist ABE28_014610 IPR036513 STAS domain superfamily ABE28_014610 IPR014237 Anti-sigma F factor antagonist ABE28_014615 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal ABE28_014615 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A ABE28_014615 IPR015956 Penicillin-binding protein, C-terminal domain superfamily ABE28_014615 IPR012338 Beta-lactamase/transpeptidase-like ABE28_014615 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal ABE28_014615 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily ABE28_014620 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic ABE28_014620 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily ABE28_014620 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily ABE28_014620 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site ABE28_014620 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily ABE28_014620 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase ABE28_014620 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal ABE28_014620 IPR017459 Glycosyl transferase family 3, N-terminal domain ABE28_014620 IPR000312 Glycosyl transferase, family 3 ABE28_014625 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific ABE28_014625 IPR011268 Purine nucleoside phosphorylase ABE28_014625 IPR018099 Purine phosphorylase, family 2, conserved site ABE28_014625 IPR035994 Nucleoside phosphorylase superfamily ABE28_014625 IPR000845 Nucleoside phosphorylase domain ABE28_014630 IPR010045 Phosphopentomutase ABE28_014630 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_014630 IPR006124 Metalloenzyme ABE28_014630 IPR024052 Phosphopentomutase DeoB cap domain superfamily ABE28_014635 IPR013762 Integrase-like, catalytic domain superfamily ABE28_014635 IPR004107 Integrase, SAM-like, N-terminal ABE28_014635 IPR011932 Tyrosine recombinase XerD ABE28_014635 IPR011010 DNA breaking-rejoining enzyme, catalytic core ABE28_014635 IPR023009 Tyrosine recombinase XerC/XerD ABE28_014635 IPR002104 Integrase, catalytic domain ABE28_014635 IPR010998 Integrase/recombinase, N-terminal ABE28_014640 IPR025321 Protein of unknown function DUF4227 ABE28_014645 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014645 IPR002481 Ferric-uptake regulator ABE28_014645 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014650 IPR002798 Stage II sporulation protein M-like ABE28_014650 IPR014196 Stage II sporulation protein M ABE28_014660 IPR005287 Conserved hypothetical protein CHP00375 ABE28_014660 IPR016195 Polymerase/histidinol phosphatase-like ABE28_014660 IPR010994 RuvA domain 2-like ABE28_014665 IPR000086 NUDIX hydrolase domain ABE28_014665 IPR020084 NUDIX hydrolase, conserved site ABE28_014665 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_014665 IPR004385 Nucleoside diphosphate pyrophosphatase ABE28_014670 IPR023210 NADP-dependent oxidoreductase domain ABE28_014670 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_014670 IPR020471 Aldo/keto reductase ABE28_014675 IPR019953 Organic hydroperoxide resistance protein famiy ABE28_014675 IPR003718 OsmC/Ohr family ABE28_014675 IPR036102 OsmC/Ohr superfamily ABE28_014675 IPR015946 K homology domain-like, alpha/beta ABE28_014680 IPR000835 MarR-type HTH domain ABE28_014680 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014680 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014690 IPR022742 Serine aminopeptidase, S33 ABE28_014690 IPR029058 Alpha/Beta hydrolase fold ABE28_014695 IPR035903 HesB-like domain superfamily ABE28_014695 IPR000361 FeS cluster biogenesis ABE28_014700 IPR014962 YolD-like protein ABE28_014705 IPR017961 DNA polymerase, Y-family, little finger domain ABE28_014705 IPR036775 DNA polymerase, Y-family, little finger domain superfamily ABE28_014705 IPR001126 UmuC domain ABE28_014705 IPR024728 DNA polymerase type-Y, HhH motif ABE28_014710 IPR018392 LysM domain ABE28_014710 IPR036779 LysM domain superfamily ABE28_014710 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_014710 IPR038765 Papain-like cysteine peptidase superfamily ABE28_014725 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_014725 IPR036291 NAD(P)-binding domain superfamily ABE28_014730 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014730 IPR001279 Metallo-beta-lactamase ABE28_014735 IPR036291 NAD(P)-binding domain superfamily ABE28_014735 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain ABE28_014735 IPR000304 Pyrroline-5-carboxylate reductase ABE28_014735 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_014735 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_014745 IPR009061 Putative DNA-binding domain superfamily ABE28_014745 IPR000551 MerR-type HTH domain ABE28_014745 IPR023522 Chromosome-anchoring protein RacA ABE28_014750 IPR003439 ABC transporter-like ABE28_014750 IPR003593 AAA+ ATPase domain ABE28_014750 IPR015856 ABC transporter, CbiO/EcfA subunit ABE28_014750 IPR017871 ABC transporter, conserved site ABE28_014750 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014750 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 ABE28_014750 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 ABE28_014765 IPR033904 Trans-Isoprenyl Diphosphate Synthases, head-to-head ABE28_014765 IPR019845 Squalene/phytoene synthase, conserved site ABE28_014765 IPR008949 Isoprenoid synthase domain superfamily ABE28_014775 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal ABE28_014775 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding ABE28_014775 IPR036291 NAD(P)-binding domain superfamily ABE28_014775 IPR001282 Glucose-6-phosphate dehydrogenase ABE28_014775 IPR019796 Glucose-6-phosphate dehydrogenase, active site ABE28_014785 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_014785 IPR006114 6-phosphogluconate dehydrogenase, C-terminal ABE28_014785 IPR006183 6-phosphogluconate dehydrogenase ABE28_014785 IPR036291 NAD(P)-binding domain superfamily ABE28_014785 IPR006184 6-phosphogluconate-binding site ABE28_014785 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding ABE28_014785 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_014785 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating ABE28_014790 IPR001126 UmuC domain ABE28_014790 IPR017961 DNA polymerase, Y-family, little finger domain ABE28_014790 IPR024728 DNA polymerase type-Y, HhH motif ABE28_014790 IPR022880 DNA polymerase IV ABE28_014790 IPR036775 DNA polymerase, Y-family, little finger domain superfamily ABE28_014795 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_014795 IPR010162 Peptidase M20B, peptidase T-like ABE28_014795 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ABE28_014795 IPR002933 Peptidase M20 ABE28_014795 IPR008007 Peptidase M42 ABE28_014795 IPR011650 Peptidase M20, dimerisation domain ABE28_014800 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ABE28_014800 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ABE28_014800 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit ABE28_014800 IPR034733 Acetyl-CoA carboxylase ABE28_014800 IPR029045 ClpP/crotonase-like domain superfamily ABE28_014810 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_014810 IPR005490 L,D-transpeptidase catalytic domain ABE28_014815 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily ABE28_014815 IPR010343 Aromatic acid exporter family member 1 ABE28_014815 IPR021062 Putative aromatic acid exporter, C-terminal ABE28_014820 IPR003593 AAA+ ATPase domain ABE28_014820 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014820 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_014820 IPR003439 ABC transporter-like ABE28_014820 IPR017871 ABC transporter, conserved site ABE28_014825 IPR035906 MetI-like superfamily ABE28_014825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_014825 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain ABE28_014830 IPR018313 Solute-binding protein family 3, conserved site ABE28_014830 IPR001320 Ionotropic glutamate receptor ABE28_014830 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_014835 IPR036249 Thioredoxin-like superfamily ABE28_014835 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_014840 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB ABE28_014840 IPR003593 AAA+ ATPase domain ABE28_014840 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014845 IPR006158 Cobalamin (vitamin B12)-binding domain ABE28_014845 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ABE28_014845 IPR006159 Methylmalonyl-CoA mutase, C-terminal ABE28_014845 IPR036724 Cobalamin-binding domain superfamily ABE28_014845 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ABE28_014845 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic ABE28_014850 IPR004608 Methylmalonyl-CoA mutase, beta chain ABE28_014850 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ABE28_014850 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ABE28_014855 IPR036625 E3-binding domain superfamily ABE28_014855 IPR004167 Peripheral subunit-binding domain ABE28_014855 IPR011053 Single hybrid motif ABE28_014855 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain ABE28_014855 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily ABE28_014855 IPR000089 Biotin/lipoyl attachment ABE28_014855 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ABE28_014860 IPR033248 Transketolase, C-terminal domain ABE28_014860 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014860 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_014860 IPR029061 Thiamin diphosphate-binding fold ABE28_014865 IPR001017 Dehydrogenase, E1 component ABE28_014865 IPR029061 Thiamin diphosphate-binding fold ABE28_014870 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABE28_014870 IPR006258 Dihydrolipoamide dehydrogenase ABE28_014870 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily ABE28_014870 IPR023753 FAD/NAD(P)-binding domain ABE28_014870 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I ABE28_014870 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site ABE28_014870 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014875 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal ABE28_014875 IPR033524 Leu/Phe/Val dehydrogenases active site ABE28_014875 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ABE28_014875 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ABE28_014875 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ABE28_014875 IPR036291 NAD(P)-binding domain superfamily ABE28_014880 IPR013767 PAS fold ABE28_014880 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_014880 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_014880 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_014880 IPR025944 Sigma-54 interaction domain, conserved site ABE28_014880 IPR000014 PAS domain ABE28_014880 IPR035965 PAS domain superfamily ABE28_014880 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014880 IPR036291 NAD(P)-binding domain superfamily ABE28_014880 IPR002197 DNA binding HTH domain, Fis-type ABE28_014880 IPR009057 Homeobox-like domain superfamily ABE28_014880 IPR003593 AAA+ ATPase domain ABE28_014885 IPR020138 Uncharacterised protein family YqzF ABE28_014890 IPR030395 Glycerophosphodiester phosphodiesterase domain ABE28_014890 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ABE28_014900 IPR012052 Sporulation transcription factor Spo0A ABE28_014900 IPR014879 Sporulation initiation factor Spo0A, C-terminal ABE28_014900 IPR011006 CheY-like superfamily ABE28_014900 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014900 IPR001789 Signal transduction response regulator, receiver domain ABE28_014900 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_014905 IPR008763 Peptidase S55, SpoIVB ABE28_014905 IPR009003 Peptidase S1, PA clan ABE28_014905 IPR036034 PDZ superfamily ABE28_014905 IPR041489 PDZ domain 6 ABE28_014905 IPR001478 PDZ domain ABE28_014905 IPR014219 Peptidase S55, sporulation stage IV, protein B ABE28_014910 IPR038729 Rad50/SbcC-type AAA domain ABE28_014910 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014910 IPR004604 DNA recombination/repair protein RecN ABE28_014915 IPR020900 Arginine repressor, DNA-binding domain ABE28_014915 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014915 IPR001669 Arginine repressor ABE28_014915 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014915 IPR036251 Arginine repressor, C-terminal domain superfamily ABE28_014915 IPR020899 Arginine repressor, C-terminal ABE28_014920 IPR002942 RNA-binding S4 domain ABE28_014920 IPR004538 Haemolysin A /rRNA methyltransferase TlyA ABE28_014920 IPR036986 RNA-binding S4 domain superfamily ABE28_014920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014920 IPR002877 Ribosomal RNA methyltransferase FtsJ domain ABE28_014925 IPR005477 Deoxyxylulose-5-phosphate synthase ABE28_014925 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II ABE28_014925 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014925 IPR020826 Transketolase binding site ABE28_014925 IPR033248 Transketolase, C-terminal domain ABE28_014925 IPR005474 Transketolase, N-terminal ABE28_014925 IPR029061 Thiamin diphosphate-binding fold ABE28_014930 IPR000092 Polyprenyl synthetase ABE28_014930 IPR008949 Isoprenoid synthase domain superfamily ABE28_014930 IPR033749 Polyprenyl synthetase, conserved site ABE28_014935 IPR003761 Exonuclease VII, small subunit ABE28_014935 IPR037004 Exonuclease VII, small subunit superfamily ABE28_014940 IPR025824 OB-fold nucleic acid binding domain ABE28_014940 IPR003753 Exonuclease VII, large subunit ABE28_014940 IPR020579 Exonuclease VII, large subunit, C-terminal ABE28_014945 IPR036291 NAD(P)-binding domain superfamily ABE28_014945 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase ABE28_014945 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABE28_014945 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site ABE28_014945 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABE28_014950 IPR006027 NusB/RsmB/TIM44 ABE28_014950 IPR035926 NusB-like superfamily ABE28_014950 IPR011605 NusB antitermination factor ABE28_014955 IPR005531 Alkaline shock protein Asp23 ABE28_014960 IPR005481 Biotin carboxylase-like, N-terminal domain ABE28_014960 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase ABE28_014960 IPR011761 ATP-grasp fold ABE28_014960 IPR011764 Biotin carboxylation domain ABE28_014960 IPR005482 Biotin carboxylase, C-terminal ABE28_014960 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain ABE28_014960 IPR016185 Pre-ATP-grasp domain superfamily ABE28_014960 IPR011054 Rudiment single hybrid motif ABE28_014965 IPR001249 Acetyl-CoA biotin carboxyl carrier ABE28_014965 IPR001882 Biotin-binding site ABE28_014965 IPR000089 Biotin/lipoyl attachment ABE28_014965 IPR011053 Single hybrid motif ABE28_014970 IPR038503 Stage III sporulation protein AH-like superfamily ABE28_014970 IPR024232 Stage III sporulation protein AH-like ABE28_014975 IPR014195 Sporulation stage III, protein AG ABE28_014980 IPR014245 Sporulation stage III, protein AF ABE28_014985 IPR014194 Sporulation stage III, protein AE ABE28_014990 IPR025664 Stage III sporulation protein AC/AD family ABE28_014990 IPR014211 Stage III sporulation protein AD ABE28_014995 IPR025664 Stage III sporulation protein AC/AD family ABE28_014995 IPR009570 Stage III sporulation protein AC ABE28_015000 IPR014198 Stage III sporulation protein AB ABE28_015005 IPR014217 Sporulation stage III, protein AA ABE28_015005 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015005 IPR003593 AAA+ ATPase domain ABE28_015010 IPR015365 Elongation factor P, C-terminal ABE28_015010 IPR014722 Ribosomal protein L2, domain 2 ABE28_015010 IPR020599 Translation elongation factor P/YeiP ABE28_015010 IPR013185 Translation elongation factor, KOW-like ABE28_015010 IPR001059 Translation elongation factor P/YeiP, central ABE28_015010 IPR013852 Translation elongation factor P/YeiP, conserved site ABE28_015010 IPR011768 Translation elongation factor P ABE28_015010 IPR008991 Translation protein SH3-like domain superfamily ABE28_015010 IPR012340 Nucleic acid-binding, OB-fold ABE28_015015 IPR000994 Peptidase M24 ABE28_015015 IPR000587 Creatinase, N-terminal ABE28_015015 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_015015 IPR036005 Creatinase/aminopeptidase-like ABE28_015015 IPR001714 Peptidase M24, methionine aminopeptidase ABE28_015015 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABE28_015020 IPR036441 Dehydroquinase, class II superfamily ABE28_015020 IPR001874 Dehydroquinase, class II ABE28_015020 IPR018509 Dehydroquinase, class II, conserved site ABE28_015025 IPR024563 Uncharacterised protein family YqhR ABE28_015030 IPR010787 Protein of unknown function DUF1385 ABE28_015040 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_015040 IPR002641 Patatin-like phospholipase domain ABE28_015045 IPR034560 Spore photoproduct lyase, Bacilli type ABE28_015045 IPR023897 Spore photoproduct lyase ABE28_015055 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal ABE28_015055 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent ABE28_015055 IPR013509 Ribonucleotide reductase large subunit, N-terminal ABE28_015055 IPR000788 Ribonucleotide reductase large subunit, C-terminal ABE28_015055 IPR005144 ATP-cone domain ABE28_015060 IPR024898 Octanoyltransferase LipM ABE28_015060 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ABE28_015065 IPR001763 Rhodanese-like domain ABE28_015065 IPR036873 Rhodanese-like domain superfamily ABE28_015070 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_015070 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_015070 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015070 IPR020581 Glycine cleavage system P protein ABE28_015070 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 ABE28_015075 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015075 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_015075 IPR020581 Glycine cleavage system P protein ABE28_015075 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_015075 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 ABE28_015080 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ABE28_015080 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain ABE28_015080 IPR028896 Aminomethyltransferase-like ABE28_015080 IPR022903 Glycine cleavage system T protein, bacteria ABE28_015080 IPR006223 Glycine cleavage system T protein ABE28_015080 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ABE28_015080 IPR006222 Aminomethyltransferase, folate-binding domain ABE28_015085 IPR000330 SNF2-related, N-terminal domain ABE28_015085 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_015085 IPR001650 Helicase, C-terminal ABE28_015085 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015085 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_015090 IPR024562 Uncharacterised protein family YqhG ABE28_015110 IPR012902 Prokaryotic N-terminal methylation site ABE28_015120 IPR012902 Prokaryotic N-terminal methylation site ABE28_015120 IPR016940 ComG operon protein C ABE28_015120 IPR000983 Bacterial general secretion pathway protein G-type pilin ABE28_015125 IPR042094 Type II secretion system F domain superfamily ABE28_015125 IPR003004 GspF/PilC family ABE28_015125 IPR001992 Type II secretion system conserved site ABE28_015125 IPR018076 Type II secretion system F domain ABE28_015130 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015130 IPR003593 AAA+ ATPase domain ABE28_015130 IPR001482 Type II/IV secretion system protein ABE28_015135 IPR006504 Transcriptional regulator Spx/MgsR ABE28_015135 IPR006660 Arsenate reductase-like ABE28_015135 IPR036249 Thioredoxin-like superfamily ABE28_015145 IPR020254 Protein of unknown function DUF2626 ABE28_015155 IPR001279 Metallo-beta-lactamase ABE28_015155 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015160 IPR024490 Protein of unknown function DUF2759 ABE28_015170 IPR000209 Peptidase S8/S53 domain ABE28_015170 IPR036852 Peptidase S8/S53 domain superfamily ABE28_015170 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_015170 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily ABE28_015170 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 ABE28_015170 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_015170 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_015170 IPR015500 Peptidase S8, subtilisin-related ABE28_015170 IPR034202 Subtilisin Carlsberg-like catalytic domain ABE28_015180 IPR036779 LysM domain superfamily ABE28_015180 IPR018392 LysM domain ABE28_015180 IPR000834 Peptidase M14, carboxypeptidase A ABE28_015180 IPR034274 ENP1, carboxypeptidase domain ABE28_015185 IPR000600 ROK family ABE28_015185 IPR004654 Glucokinase ROK ABE28_015200 IPR019734 Tetratricopeptide repeat ABE28_015200 IPR035952 Rhomboid-like superfamily ABE28_015200 IPR013026 Tetratricopeptide repeat-containing domain ABE28_015200 IPR011990 Tetratricopeptide-like helical domain superfamily ABE28_015200 IPR022764 Peptidase S54, rhomboid domain ABE28_015210 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_015210 IPR037171 NagB/RpiA transferase-like ABE28_015210 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABE28_015230 IPR026022 PhoU domain ABE28_015230 IPR038078 PhoU-like domain superfamily ABE28_015230 IPR028366 Phosphate transport system protein PhoU ABE28_015235 IPR005670 Phosphate transport system permease protein 1 ABE28_015235 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015235 IPR015850 ABC transporter, phosphate import, PstB ABE28_015235 IPR017871 ABC transporter, conserved site ABE28_015235 IPR003439 ABC transporter-like ABE28_015235 IPR003593 AAA+ ATPase domain ABE28_015240 IPR005672 Phosphate transport system permease protein PstA ABE28_015240 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_015240 IPR035906 MetI-like superfamily ABE28_015245 IPR035906 MetI-like superfamily ABE28_015245 IPR011864 Phosphate ABC transporter, permease protein PstC ABE28_015245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_015250 IPR024370 PBP domain ABE28_015250 IPR011862 Phosphate binding protein ABE28_015260 IPR036259 MFS transporter superfamily ABE28_015260 IPR011701 Major facilitator superfamily ABE28_015265 IPR019833 Manganese/iron superoxide dismutase, binding site ABE28_015265 IPR001189 Manganese/iron superoxide dismutase ABE28_015265 IPR019831 Manganese/iron superoxide dismutase, N-terminal ABE28_015265 IPR019832 Manganese/iron superoxide dismutase, C-terminal ABE28_015265 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily ABE28_015265 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily ABE28_015270 IPR007403 Protein of unknown function DUF456 ABE28_015275 IPR009574 Protein of unknown function DUF1189 ABE28_015285 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type ABE28_015285 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial ABE28_015285 IPR011005 Dihydropteroate synthase-like ABE28_015295 IPR036412 HAD-like superfamily ABE28_015295 IPR009206 Nucleotidase, putative ABE28_015295 IPR023214 HAD superfamily ABE28_015300 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015300 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015300 IPR002481 Ferric-uptake regulator ABE28_015305 IPR037294 ABC transporter, BtuC-like ABE28_015305 IPR001626 ABC transporter, TroCD-like ABE28_015310 IPR003593 AAA+ ATPase domain ABE28_015310 IPR003439 ABC transporter-like ABE28_015310 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015310 IPR017871 ABC transporter, conserved site ABE28_015320 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_015320 IPR001719 AP endonuclease 2 ABE28_015320 IPR036237 Xylose isomerase-like superfamily ABE28_015320 IPR018246 AP endonuclease 2, zinc binding site ABE28_015325 IPR030881 DEAD-box ATP-dependent RNA helicase CshB ABE28_015325 IPR001650 Helicase, C-terminal ABE28_015325 IPR011545 DEAD/DEAH box helicase domain ABE28_015325 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_015325 IPR014014 RNA helicase, DEAD-box type, Q motif ABE28_015325 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015340 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase ABE28_015345 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABE28_015345 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ABE28_015345 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria ABE28_015345 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_015350 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015350 IPR006901 tRNA methyltransferase TrmK ABE28_015355 IPR036909 Cytochrome c-like domain superfamily ABE28_015355 IPR009056 Cytochrome c-like domain ABE28_015355 IPR012218 Cytochrome c, Bacillus subtilis c550-related ABE28_015365 IPR028630 RNA polymerase sigma factor RpoD ABE28_015365 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015365 IPR012760 RNA polymerase sigma factor RpoD, C-terminal ABE28_015365 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_015365 IPR007624 RNA polymerase sigma-70 region 3 ABE28_015365 IPR013325 RNA polymerase sigma factor, region 2 ABE28_015365 IPR042189 Sigma-70 factor, region 1.1 superfamily ABE28_015365 IPR007627 RNA polymerase sigma-70 region 2 ABE28_015365 IPR009042 RNA polymerase sigma-70 region 1.2 ABE28_015365 IPR000943 RNA polymerase sigma-70 ABE28_015365 IPR007127 RNA polymerase sigma factor 70, region 1.1 ABE28_015365 IPR014284 RNA polymerase sigma-70 like domain ABE28_015365 IPR007630 RNA polymerase sigma-70 region 4 ABE28_015370 IPR002694 Zinc finger, CHC2-type ABE28_015370 IPR030846 DNA primase DnaG, bacteria ABE28_015370 IPR034151 Bacterial DnaG primase, TOPRIM domain ABE28_015370 IPR006295 DNA primase, DnaG ABE28_015370 IPR019475 DNA primase, DnaB-helicase binding domain ABE28_015370 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ABE28_015370 IPR013264 DNA primase, catalytic core, N-terminal ABE28_015370 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_015370 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ABE28_015370 IPR036977 DNA Primase, CHC2-type zinc finger ABE28_015370 IPR006171 TOPRIM domain ABE28_015375 IPR003791 Protein of unknown function UPF0178 ABE28_015380 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein ABE28_015380 IPR005177 Bifunctional kinase-pyrophosphorylase ABE28_015385 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015385 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015385 IPR016842 Protein of unknown function UCP026546, HtH-CBS ABE28_015385 IPR013196 Helix-turn-helix, type 11 ABE28_015385 IPR000644 CBS domain ABE28_015390 IPR006194 Glycine-tRNA synthetase, heterodimeric ABE28_015390 IPR015944 Glycine-tRNA ligase, beta subunit ABE28_015395 IPR006194 Glycine-tRNA synthetase, heterodimeric ABE28_015395 IPR002310 Glycine-tRNA ligase, alpha subunit ABE28_015400 IPR037278 ARFGAP/RecO-like zinc finger ABE28_015400 IPR022572 DNA replication/recombination mediator RecO, N-terminal ABE28_015400 IPR012340 Nucleic acid-binding, OB-fold ABE28_015400 IPR003717 Recombination protein O, RecO ABE28_015400 IPR042242 Recombination protein O, zinc-binding domain ABE28_015405 IPR025617 YqzL-like protein ABE28_015410 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015410 IPR006073 GTP binding domain ABE28_015410 IPR005225 Small GTP-binding protein domain ABE28_015410 IPR004044 K Homology domain, type 2 ABE28_015410 IPR009019 K homology domain superfamily, prokaryotic type ABE28_015410 IPR015946 K homology domain-like, alpha/beta ABE28_015410 IPR005662 GTP-binding protein Era ABE28_015410 IPR030388 Era-type guanine nucleotide-binding (G) domain ABE28_015415 IPR016193 Cytidine deaminase-like ABE28_015415 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_015415 IPR006262 Cytidine deaminase, homotetrameric ABE28_015415 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_015420 IPR033717 Undecaprenol kinase ABE28_015420 IPR036945 Diacylglycerol kinase (DAGK) superfamily ABE28_015420 IPR000829 DAGK family ABE28_015425 IPR020549 Endoribonuclease YbeY, conserved site ABE28_015425 IPR002036 Endoribonuclease YbeY ABE28_015425 IPR023091 Metalloprotease catalytic domain superfamily, predicted ABE28_015430 IPR003607 HD/PDEase domain ABE28_015430 IPR006674 HD domain ABE28_015430 IPR006675 HDIG domain ABE28_015430 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain ABE28_015430 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain ABE28_015435 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015435 IPR003714 PhoH-like protein ABE28_015440 IPR010690 Putative stage IV sporulation YqfD ABE28_015445 IPR022477 Sporulation protein YqfC ABE28_015445 IPR022476 Sporulation protein YabP/YqfC ABE28_015455 IPR022853 Uncharacterised protein family YdfA-immunity ABE28_015460 IPR002825 Peptidase S49, serine-peptidase prokaryotes ABE28_015460 IPR029045 ClpP/crotonase-like domain superfamily ABE28_015460 IPR002810 NfeD-like, C-terminal domain ABE28_015465 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 ABE28_015465 IPR019004 Uncharacterised protein YqeY/Aim41 ABE28_015465 IPR042184 YqeY/Aim41, N-terminal domain ABE28_015465 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like ABE28_015470 IPR001911 Ribosomal protein S21 ABE28_015470 IPR018278 Ribosomal protein S21, conserved site ABE28_015470 IPR038380 Ribosomal protein S21 superfamily ABE28_015475 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein ABE28_015475 IPR003841 Sodium-dependent phosphate transport protein ABE28_015485 IPR002915 DeoC/FbaB/ lacD aldolase ABE28_015485 IPR013785 Aldolase-type TIM barrel ABE28_015485 IPR011343 Deoxyribose-phosphate aldolase ABE28_015485 IPR028581 Deoxyribose-phosphate aldolase type I ABE28_015490 IPR002792 TRAM domain ABE28_015490 IPR034557 Threonylcarbamoyladenosine tRNA methylthiotransferase ABE28_015490 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_015490 IPR007197 Radical SAM ABE28_015490 IPR006467 MiaB-like tRNA modifying enzyme ABE28_015490 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABE28_015490 IPR020612 Methylthiotransferase, conserved site ABE28_015490 IPR005839 Methylthiotransferase ABE28_015490 IPR006638 Elp3/MiaB/NifB ABE28_015490 IPR013848 Methylthiotransferase, N-terminal ABE28_015495 IPR015947 PUA-like superfamily ABE28_015495 IPR006700 Ribosomal RNA small subunit methyltransferase E ABE28_015495 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_015495 IPR029028 Alpha/beta knot methyltransferases ABE28_015500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015500 IPR004498 Ribosomal protein L11 methyltransferase ABE28_015505 IPR001305 Heat shock protein DnaJ, cysteine-rich domain ABE28_015505 IPR036869 Chaperone J-domain superfamily ABE28_015505 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABE28_015505 IPR008971 HSP40/DnaJ peptide-binding ABE28_015505 IPR012724 Chaperone DnaJ ABE28_015505 IPR002939 Chaperone DnaJ, C-terminal ABE28_015505 IPR018253 DnaJ domain, conserved site ABE28_015505 IPR001623 DnaJ domain ABE28_015510 IPR018181 Heat shock protein 70, conserved site ABE28_015510 IPR012725 Chaperone DnaK ABE28_015510 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily ABE28_015510 IPR013126 Heat shock protein 70 family ABE28_015510 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily ABE28_015515 IPR009012 GrpE nucleotide exchange factor, head ABE28_015515 IPR013805 GrpE nucleotide exchange factor, coiled-coil ABE28_015515 IPR000740 GrpE nucleotide exchange factor ABE28_015525 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_015525 IPR010723 HemN, C-terminal ABE28_015525 IPR006638 Elp3/MiaB/NifB ABE28_015525 IPR034505 Anaerobic coproporphyrinogen-III oxidase ABE28_015525 IPR004559 Heme chaperone HemW-like ABE28_015525 IPR007197 Radical SAM ABE28_015530 IPR000795 Transcription factor, GTP-binding domain ABE28_015530 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015530 IPR035654 Elongation factor 4, domain IV ABE28_015530 IPR013842 GTP-binding protein LepA, C-terminal ABE28_015530 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_015530 IPR005225 Small GTP-binding protein domain ABE28_015530 IPR038363 LepA, C-terminal domain superfamily ABE28_015530 IPR031157 Tr-type G domain, conserved site ABE28_015530 IPR004161 Translation elongation factor EFTu-like, domain 2 ABE28_015530 IPR000640 Elongation factor EFG, domain V-like ABE28_015530 IPR006297 Elongation factor 4 ABE28_015530 IPR035647 EF-G domain III/V-like ABE28_015540 IPR010897 Sporulation stage II, protein P ABE28_015545 IPR005080 Peptidase A25, germination protease ABE28_015545 IPR023430 Peptidase HybD-like domain superfamily ABE28_015550 IPR036510 Ribosomal protein S20 superfamily ABE28_015550 IPR002583 Ribosomal protein S20 ABE28_015555 IPR005790 DNA polymerase III, delta subunit ABE28_015555 IPR010372 DNA polymerase III delta, N-terminal ABE28_015555 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015555 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ABE28_015565 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015565 IPR025405 Domain of unknown function DUF4131 ABE28_015565 IPR004797 Competence protein ComEC/Rec2 ABE28_015565 IPR004477 ComEC/Rec2-related protein ABE28_015565 IPR035681 ComA-like, MBL domain ABE28_015565 IPR001279 Metallo-beta-lactamase ABE28_015570 IPR013404 Competence operon E, ComEB ABE28_015570 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_015570 IPR016193 Cytidine deaminase-like ABE28_015570 IPR015517 Deoxycytidylate deaminase-related ABE28_015570 IPR035105 Deoxycytidylate deaminase domain ABE28_015570 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_015575 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ABE28_015575 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ABE28_015575 IPR010994 RuvA domain 2-like ABE28_015575 IPR019554 Soluble ligand binding domain ABE28_015575 IPR004787 Competence protein ComEA ABE28_015580 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain ABE28_015580 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_015580 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_015580 IPR036291 NAD(P)-binding domain superfamily ABE28_015580 IPR000304 Pyrroline-5-carboxylate reductase ABE28_015585 IPR041698 Methyltransferase domain 25 ABE28_015585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015590 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABE28_015595 IPR006674 HD domain ABE28_015595 IPR005249 Conserved hypothetical protein CHP00488 ABE28_015595 IPR003607 HD/PDEase domain ABE28_015600 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase ABE28_015600 IPR004821 Cytidyltransferase-like domain ABE28_015600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_015605 IPR017924 RNA-binding protein YhbY ABE28_015605 IPR001890 RNA-binding, CRM domain ABE28_015605 IPR035920 YhbY-like superfamily ABE28_015610 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal ABE28_015610 IPR041121 SDH, C-terminal ABE28_015610 IPR022893 Shikimate dehydrogenase family ABE28_015610 IPR011342 Shikimate dehydrogenase ABE28_015610 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABE28_015610 IPR036291 NAD(P)-binding domain superfamily ABE28_015615 IPR006073 GTP binding domain ABE28_015615 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain ABE28_015615 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015615 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH ABE28_015620 IPR023214 HAD superfamily ABE28_015620 IPR036412 HAD-like superfamily ABE28_015620 IPR006439 HAD hydrolase, subfamily IA ABE28_015620 IPR006549 HAD-superfamily hydrolase,subfamily IIIA ABE28_015620 IPR010021 HAD-superfamily phosphatase, YqeG-like ABE28_015625 IPR015064 Sporulation inhibitor A ABE28_015625 IPR036916 Sporulation inhibitor A superfamily ABE28_015630 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 ABE28_015630 IPR033177 Phosphatidylserine decarboxylase ABE28_015630 IPR003817 Phosphatidylserine decarboxylase-related ABE28_015635 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase ABE28_015635 IPR000462 CDP-alcohol phosphatidyltransferase ABE28_015650 IPR014209 RNA polymerase sigma-K type ABE28_015650 IPR000943 RNA polymerase sigma-70 ABE28_015650 IPR007627 RNA polymerase sigma-70 region 2 ABE28_015650 IPR014284 RNA polymerase sigma-70 like domain ABE28_015650 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_015650 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015650 IPR013325 RNA polymerase sigma factor, region 2 ABE28_015650 IPR007630 RNA polymerase sigma-70 region 4 ABE28_015665 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_015665 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015665 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_015665 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ABE28_015670 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ABE28_015670 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_015670 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_015675 IPR035994 Nucleoside phosphorylase superfamily ABE28_015675 IPR000845 Nucleoside phosphorylase domain ABE28_015675 IPR010049 MTA/SAH nucleosidase ABE28_015680 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015680 IPR013216 Methyltransferase type 11 ABE28_015680 IPR023553 Uncharacterised methyltransferase, YrrT ABE28_015685 IPR019686 Protein of unknown function DUF2536 ABE28_015690 IPR009988 Domain of unknown function DUF1510 ABE28_015695 IPR012338 Beta-lactamase/transpeptidase-like ABE28_015695 IPR001460 Penicillin-binding protein, transpeptidase ABE28_015695 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ABE28_015695 IPR005311 Penicillin-binding protein, dimerisation domain ABE28_015700 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily ABE28_015700 IPR018151 Transcription elongation factor, GreA/GreB, conserved site ABE28_015700 IPR006359 Transcription elongation factor GreA ABE28_015700 IPR028624 Transcription elongation factor GreA/GreB ABE28_015700 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal ABE28_015700 IPR023459 Transcription elongation factor GreA/GreB family ABE28_015700 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal ABE28_015700 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily ABE28_015705 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015705 IPR000764 Uridine kinase-like ABE28_015705 IPR026008 Uridine kinase ABE28_015705 IPR006083 Phosphoribulokinase/uridine kinase ABE28_015725 IPR003770 Endolytic murein transglycosylase ABE28_015730 IPR009711 Uncharacterised protein family UPF0473 ABE28_015735 IPR012337 Ribonuclease H-like superfamily ABE28_015735 IPR006641 YqgF/RNase H-like domain ABE28_015735 IPR005227 Putative pre-16S rRNA nuclease ABE28_015735 IPR037027 YqgF/RNase H-like domain superfamily ABE28_015740 IPR009309 IreB regulatory phosphoprotein ABE28_015745 IPR002318 Alanine-tRNA ligase, class IIc ABE28_015745 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily ABE28_015745 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain ABE28_015745 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal ABE28_015745 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria ABE28_015745 IPR003156 DHHA1 domain ABE28_015745 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ABE28_015745 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_015745 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ABE28_015750 IPR002549 Transmembrane protein TqsA-like ABE28_015760 IPR011033 PRC-barrel-like superfamily ABE28_015760 IPR027275 PRC-barrel domain ABE28_015770 IPR023353 LemA-like domain superfamily ABE28_015770 IPR007156 LemA ABE28_015775 IPR027785 UvrD-like helicase C-terminal domain ABE28_015775 IPR041451 RecD-like DNA helicase, SH3 domain ABE28_015775 IPR029493 RecD helicase-like helix-hairpin-helix domain ABE28_015775 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015775 IPR006345 RecD-like DNA helicase ABE28_015775 IPR003593 AAA+ ATPase domain ABE28_015785 IPR023382 Adenine nucleotide alpha hydrolase-like domains ABE28_015785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_015785 IPR004506 tRNA-specific 2-thiouridylase ABE28_015790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_015790 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_015790 IPR016454 Cysteine desulfurase ABE28_015790 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015790 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_015790 IPR000192 Aminotransferase class V domain ABE28_015795 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_015795 IPR000944 Transcription regulator Rrf2-type ABE28_015795 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015795 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015810 IPR032423 AAA C-terminal domain ABE28_015810 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal ABE28_015810 IPR021886 MgsA AAA+ ATPase C-terminal ABE28_015810 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015810 IPR008824 RuvB-like P-loop domain ABE28_015810 IPR003593 AAA+ ATPase domain ABE28_015825 IPR003439 ABC transporter-like ABE28_015825 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015825 IPR003593 AAA+ ATPase domain ABE28_015830 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015830 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015830 IPR000524 Transcription regulator HTH, GntR ABE28_015840 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_015840 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU ABE28_015855 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ABE28_015855 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ABE28_015875 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ABE28_015875 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ABE28_015875 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ABE28_015875 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase ABE28_015875 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ABE28_015875 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ABE28_015875 IPR036291 NAD(P)-binding domain superfamily ABE28_015875 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_015880 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type ABE28_015880 IPR005835 Nucleotidyl transferase domain ABE28_015880 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015900 IPR005702 Exopolysaccharide synthesis protein ABE28_015900 IPR025669 AAA domain ABE28_015900 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015905 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase ABE28_015905 IPR003362 Bacterial sugar transferase ABE28_015910 IPR036291 NAD(P)-binding domain superfamily ABE28_015910 IPR016040 NAD(P)-binding domain ABE28_015925 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015925 IPR001173 Glycosyltransferase 2-like ABE28_015930 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ABE28_015930 IPR001296 Glycosyl transferase, family 1 ABE28_015970 IPR001343 RTX calcium-binding nonapeptide repeat ABE28_015970 IPR018511 Hemolysin-type calcium-binding conserved site ABE28_015970 IPR006626 Parallel beta-helix repeat ABE28_015970 IPR012334 Pectin lyase fold ABE28_015970 IPR006633 Carbohydrate-binding/sugar hydrolysis domain ABE28_015970 IPR024535 Pectate lyase superfamily protein ABE28_015970 IPR013858 Peptidase M10 serralysin, C-terminal ABE28_015970 IPR011050 Pectin lyase fold/virulence factor ABE28_015970 IPR011049 Serralysin-like metalloprotease, C-terminal ABE28_016000 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ABE28_016000 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ABE28_016005 IPR036291 NAD(P)-binding domain superfamily ABE28_016005 IPR001509 NAD-dependent epimerase/dehydratase ABE28_016005 IPR011051 RmlC-like cupin domain superfamily ABE28_016005 IPR014710 RmlC-like jelly roll fold ABE28_016010 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain ABE28_016010 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_016010 IPR036291 NAD(P)-binding domain superfamily ABE28_016020 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABE28_016020 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016020 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_016020 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_016030 IPR003362 Bacterial sugar transferase ABE28_016035 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ABE28_016035 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type ABE28_016035 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ABE28_016035 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ABE28_016035 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ABE28_016035 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ABE28_016035 IPR036291 NAD(P)-binding domain superfamily ABE28_016035 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_016040 IPR036291 NAD(P)-binding domain superfamily ABE28_016040 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_016040 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_016045 IPR016195 Polymerase/histidinol phosphatase-like ABE28_016045 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC ABE28_016050 IPR025669 AAA domain ABE28_016050 IPR005702 Exopolysaccharide synthesis protein ABE28_016050 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016055 IPR003856 Polysaccharide chain length determinant N-terminal domain ABE28_016055 IPR032807 Tyrosine kinase, G-rich domain ABE28_016060 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_016060 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain ABE28_016060 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_016060 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily ABE28_016080 IPR036852 Peptidase S8/S53 domain superfamily ABE28_016080 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_016080 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_016080 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_016080 IPR015500 Peptidase S8, subtilisin-related ABE28_016080 IPR034084 Thermitase-like, domain ABE28_016080 IPR000209 Peptidase S8/S53 domain ABE28_016085 IPR001207 Transposase, mutator type ABE28_016090 IPR003593 AAA+ ATPase domain ABE28_016090 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein ABE28_016090 IPR003439 ABC transporter-like ABE28_016090 IPR017871 ABC transporter, conserved site ABE28_016090 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016095 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016095 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ABE28_016095 IPR003439 ABC transporter-like ABE28_016095 IPR003593 AAA+ ATPase domain ABE28_016095 IPR017871 ABC transporter, conserved site ABE28_016100 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal ABE28_016100 IPR001851 ABC transporter, permease ABE28_016105 IPR001851 ABC transporter, permease ABE28_016110 IPR028082 Periplasmic binding protein-like I ABE28_016110 IPR028081 Leucine-binding protein domain ABE28_016110 IPR000709 Leu/Ile/Val-binding protein ABE28_016115 IPR028081 Leucine-binding protein domain ABE28_016115 IPR000709 Leu/Ile/Val-binding protein ABE28_016115 IPR028082 Periplasmic binding protein-like I ABE28_016120 IPR000594 THIF-type NAD/FAD binding fold ABE28_016120 IPR035985 Ubiquitin-activating enzyme ABE28_016125 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ABE28_016125 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_016125 IPR017150 Peptidase M20, glutamate carboxypeptidase ABE28_016125 IPR011650 Peptidase M20, dimerisation domain ABE28_016125 IPR002933 Peptidase M20 ABE28_016140 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ABE28_016140 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) ABE28_016140 IPR029351 GAD domain ABE28_016140 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_016140 IPR004115 GAD-like domain superfamily ABE28_016140 IPR004524 Aspartate-tRNA ligase, type 1 ABE28_016140 IPR012340 Nucleic acid-binding, OB-fold ABE28_016140 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb ABE28_016145 IPR033656 Histidyl-anticodon-binding ABE28_016145 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit ABE28_016145 IPR015807 Histidine-tRNA ligase ABE28_016145 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain ABE28_016145 IPR004154 Anticodon-binding ABE28_016145 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_016145 IPR036621 Anticodon-binding domain superfamily ABE28_016150 IPR003646 SH3-like domain, bacterial-type ABE28_016150 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted ABE28_016150 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain ABE28_016155 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ABE28_016155 IPR003732 D-aminoacyl-tRNA deacylase DTD ABE28_016160 IPR012675 Beta-grasp domain superfamily ABE28_016160 IPR003607 HD/PDEase domain ABE28_016160 IPR002912 ACT domain ABE28_016160 IPR033655 RelA, TGS domain ABE28_016160 IPR004095 TGS ABE28_016160 IPR007685 RelA/SpoT ABE28_016160 IPR012676 TGS-like ABE28_016160 IPR004811 RelA/SpoT family ABE28_016165 IPR005764 Adenine phosphoribosyl transferase ABE28_016165 IPR000836 Phosphoribosyltransferase domain ABE28_016165 IPR029057 Phosphoribosyltransferase-like ABE28_016170 IPR038763 DHH phosphoesterase superfamily ABE28_016170 IPR041122 RecJ, OB domain ABE28_016170 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal ABE28_016170 IPR004610 Bacterial RecJ exonuclease ABE28_016170 IPR003156 DHHA1 domain ABE28_016170 IPR001667 DDH domain ABE28_016175 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 IPR005665 Protein-export membrane protein SecF, bacterial ABE28_016175 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABE28_016175 IPR005791 Protein translocase subunit SecD ABE28_016175 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ABE28_016185 IPR014249 Sporulation stage V protein B ABE28_016185 IPR002797 Polysaccharide biosynthesis protein ABE28_016185 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_016185 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_016190 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_016190 IPR007353 Protein of unknown function DUF421 ABE28_016195 IPR023804 Protein of unknown function DUF3792, transmembrane ABE28_016200 IPR003849 Preprotein translocase YajC ABE28_016205 IPR002616 tRNA-guanine(15) transglycosylase-like ABE28_016205 IPR004803 tRNA-guanine transglycosylase ABE28_016205 IPR036511 Queuine tRNA-ribosyltransferase-like ABE28_016210 IPR042118 QueA, domain 1 ABE28_016210 IPR042119 QueA, domain 2 ABE28_016210 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily ABE28_016210 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA ABE28_016215 IPR021320 Protein of unknown function DUF2905 ABE28_016220 IPR004605 DNA helicase, Holliday junction RuvB-type ABE28_016220 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016220 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016220 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016220 IPR008823 RuvB C-terminal winged helix domain ABE28_016220 IPR003593 AAA+ ATPase domain ABE28_016220 IPR008824 RuvB-like P-loop domain ABE28_016220 IPR041445 RuvB, AAA lid domain ABE28_016240 IPR038117 Bypass of forespore C, C-terminal domain superfamily ABE28_016240 IPR015071 Bypass-of-forespore C, N-terminal ABE28_016240 IPR015050 Bypass of forespore C, C-terminal ABE28_016240 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily ABE28_016255 IPR036779 LysM domain superfamily ABE28_016255 IPR018392 LysM domain ABE28_016255 IPR014248 Spore coat assembly protein SafA ABE28_016265 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative ABE28_016270 IPR003473 Quinolinate synthetase A ABE28_016270 IPR023515 Quinolinate synthase A, type 3 ABE28_016270 IPR036094 Quinolinate synthetase A superfamily ABE28_016275 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily ABE28_016275 IPR013785 Aldolase-type TIM barrel ABE28_016275 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal ABE28_016275 IPR004393 Nicotinate-nucleotide pyrophosphorylase ABE28_016275 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal ABE28_016275 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD ABE28_016275 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal ABE28_016280 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ABE28_016280 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ABE28_016280 IPR005288 L-aspartate oxidase ABE28_016280 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ABE28_016280 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ABE28_016280 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_016285 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_016285 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_016285 IPR000192 Aminotransferase class V domain ABE28_016285 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_016285 IPR016454 Cysteine desulfurase ABE28_016285 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016290 IPR026043 Transcription repressor NadR ABE28_016290 IPR035922 3H domain superfamily ABE28_016290 IPR004173 3H domain ABE28_016290 IPR013196 Helix-turn-helix, type 11 ABE28_016290 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016290 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016305 IPR025948 HTH-like domain ABE28_016305 IPR001584 Integrase, catalytic core ABE28_016305 IPR012337 Ribonuclease H-like superfamily ABE28_016305 IPR036397 Ribonuclease H superfamily ABE28_016305 IPR038965 Transposase InsF-like ABE28_016310 IPR002912 ACT domain ABE28_016310 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase ABE28_016310 IPR018528 Prephenate dehydratase, conserved site ABE28_016310 IPR001086 Prephenate dehydratase ABE28_016315 IPR002912 ACT domain ABE28_016315 IPR008310 UPF0735 ACT domain-containing protein ABE28_016320 IPR006073 GTP binding domain ABE28_016320 IPR006169 GTP1/OBG domain ABE28_016320 IPR006074 GTP1/OBG, conserved site ABE28_016320 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily ABE28_016320 IPR014100 GTP-binding protein Obg/CgtA ABE28_016320 IPR035101 GTP-binding protein, Obg-type ABE28_016320 IPR015349 GTP-binding protein OBG, C-terminal ABE28_016320 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016320 IPR005225 Small GTP-binding protein domain ABE28_016320 IPR031167 OBG-type guanine nucleotide-binding (G) domain ABE28_016320 IPR036726 GTP1/OBG domain superfamily ABE28_016325 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB ABE28_016325 IPR039506 SpoOB, alpha-helical domain ABE28_016325 IPR016122 Sporulation initiation phosphotransferase B, C-terminal ABE28_016325 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily ABE28_016330 IPR018261 Ribosomal protein L27, conserved site ABE28_016330 IPR001684 Ribosomal protein L27 ABE28_016335 IPR007422 Cysteine protease Prp ABE28_016335 IPR036764 Cysteine protease Prp superfamily ABE28_016340 IPR018258 Ribosomal protein L21, conserved site ABE28_016340 IPR036164 L21-like superfamily ABE28_016340 IPR028909 Ribosomal protein L21-like ABE28_016340 IPR001787 Ribosomal protein L21 ABE28_016345 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G ABE28_016345 IPR003029 S1 domain ABE28_016345 IPR022967 RNA-binding domain, S1 ABE28_016345 IPR004659 Ribonuclease E/G ABE28_016345 IPR012340 Nucleic acid-binding, OB-fold ABE28_016350 IPR008915 Peptidase M50 ABE28_016355 IPR016047 Peptidase M23 ABE28_016355 IPR011055 Duplicated hybrid motif ABE28_016360 IPR012340 Nucleic acid-binding, OB-fold ABE28_016360 IPR003029 S1 domain ABE28_016360 IPR022967 RNA-binding domain, S1 ABE28_016365 IPR025501 ATP binding protein MinD ABE28_016365 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ABE28_016365 IPR010223 ATP binding protein MinD, bacterial-type ABE28_016365 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016380 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 ABE28_016380 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 ABE28_016380 IPR007221 Rod shape-determining protein MreC ABE28_016385 IPR004753 Cell shape determining protein MreB ABE28_016390 IPR020891 Uncharacterised protein family UPF0758, conserved site ABE28_016390 IPR037518 MPN domain ABE28_016390 IPR001405 Uncharacterised protein family UPF0758 ABE28_016390 IPR010994 RuvA domain 2-like ABE28_016390 IPR025657 RadC-like JAB domain ABE28_016395 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein ABE28_016395 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016405 IPR000045 Prepilin type IV endopeptidase, peptidase domain ABE28_016405 IPR010627 Peptidase A24A, N-terminal ABE28_016410 IPR004101 Mur ligase, C-terminal ABE28_016410 IPR036615 Mur ligase, C-terminal domain superfamily ABE28_016410 IPR036565 Mur-like, catalytic domain superfamily ABE28_016410 IPR018109 Folylpolyglutamate synthetase, conserved site ABE28_016410 IPR001645 Folylpolyglutamate synthetase ABE28_016410 IPR013221 Mur ligase, central ABE28_016415 IPR011761 ATP-grasp fold ABE28_016415 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ABE28_016415 IPR013815 ATP-grasp fold, subdomain 1 ABE28_016415 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX ABE28_016415 IPR041107 RimK, PreATP-grasp domain ABE28_016415 IPR013651 ATP-grasp fold, RimK-type ABE28_016420 IPR013815 ATP-grasp fold, subdomain 1 ABE28_016420 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK ABE28_016420 IPR041107 RimK, PreATP-grasp domain ABE28_016420 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX ABE28_016420 IPR013651 ATP-grasp fold, RimK-type ABE28_016420 IPR011761 ATP-grasp fold ABE28_016425 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016425 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_016425 IPR002303 Valine-tRNA ligase ABE28_016425 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_016425 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ABE28_016425 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ABE28_016425 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ABE28_016425 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily ABE28_016425 IPR002300 Aminoacyl-tRNA synthetase, class Ia ABE28_016425 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm ABE28_016425 IPR033705 Valyl tRNA synthetase, anticodon-binding domain ABE28_016435 IPR014253 Spore coat protein YsxE ABE28_016435 IPR011009 Protein kinase-like domain superfamily ABE28_016440 IPR036779 LysM domain superfamily ABE28_016440 IPR018392 LysM domain ABE28_016445 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase ABE28_016445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_016445 IPR005814 Aminotransferase class-III ABE28_016445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_016445 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016450 IPR001731 Delta-aminolevulinic acid dehydratase ABE28_016450 IPR030656 Delta-aminolevulinic acid dehydratase, active site ABE28_016450 IPR013785 Aldolase-type TIM barrel ABE28_016460 IPR022417 Porphobilinogen deaminase, N-terminal ABE28_016460 IPR022418 Porphobilinogen deaminase, C-terminal ABE28_016460 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily ABE28_016460 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site ABE28_016460 IPR000860 Porphobilinogen deaminase ABE28_016465 IPR002541 Cytochrome c assembly protein ABE28_016470 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABE28_016470 IPR036291 NAD(P)-binding domain superfamily ABE28_016470 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily ABE28_016470 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily ABE28_016470 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase ABE28_016470 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain ABE28_016470 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal ABE28_016470 IPR018214 Glutamyl-tRNA reductase, conserved site ABE28_016480 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016480 IPR006073 GTP binding domain ABE28_016480 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC ABE28_016480 IPR030393 EngB-type guanine nucleotide-binding (G) domain ABE28_016480 IPR005225 Small GTP-binding protein domain ABE28_016485 IPR008268 Peptidase S16, active site ABE28_016485 IPR004815 Lon protease, bacterial/eukaryotic-type ABE28_016485 IPR027065 Lon protease ABE28_016485 IPR027543 Lon protease, bacterial ABE28_016485 IPR003111 Lon, substrate-binding domain ABE28_016485 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016485 IPR015947 PUA-like superfamily ABE28_016485 IPR008269 Peptidase S16, Lon proteolytic domain ABE28_016485 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_016485 IPR003959 ATPase, AAA-type, core ABE28_016485 IPR003593 AAA+ ATPase domain ABE28_016485 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_016490 IPR003593 AAA+ ATPase domain ABE28_016490 IPR003959 ATPase, AAA-type, core ABE28_016490 IPR014251 Sporulation protease LonB ABE28_016490 IPR008269 Peptidase S16, Lon proteolytic domain ABE28_016490 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016490 IPR027065 Lon protease ABE28_016490 IPR008268 Peptidase S16, active site ABE28_016490 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_016490 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_016500 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016500 IPR010603 Zinc finger, ClpX C4-type ABE28_016500 IPR004487 Clp protease, ATP-binding subunit ClpX ABE28_016500 IPR038366 Zinc finger, ClpX C4-type superfamily ABE28_016500 IPR019489 Clp ATPase, C-terminal ABE28_016500 IPR003959 ATPase, AAA-type, core ABE28_016500 IPR003593 AAA+ ATPase domain ABE28_016505 IPR008881 Trigger factor, ribosome-binding, bacterial ABE28_016505 IPR008880 Trigger factor, C-terminal ABE28_016505 IPR005215 Trigger factor ABE28_016505 IPR027304 Trigger factor/SurA domain superfamily ABE28_016505 IPR037041 Trigger factor, C-terminal domain superfamily ABE28_016505 IPR036611 Trigger factor ribosome-binding domain superfamily ABE28_016505 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABE28_016515 IPR033940 3-isopropylmalate dehydratase, swivel domain ABE28_016515 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain ABE28_016515 IPR004431 3-isopropylmalate dehydratase, small subunit ABE28_016515 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel ABE28_016520 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 ABE28_016520 IPR004430 3-isopropylmalate dehydratase, large subunit ABE28_016520 IPR018136 Aconitase family, 4Fe-4S cluster binding site ABE28_016520 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain ABE28_016520 IPR036008 Aconitase, iron-sulfur domain ABE28_016520 IPR033941 3-Isopropylmalate dehydratase, catalytic domain ABE28_016525 IPR004429 Isopropylmalate dehydrogenase ABE28_016525 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site ABE28_016525 IPR024084 Isopropylmalate dehydrogenase-like domain ABE28_016530 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site ABE28_016530 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily ABE28_016530 IPR013785 Aldolase-type TIM barrel ABE28_016530 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain ABE28_016530 IPR005671 2-isopropylmalate synthase, bacterial-type ABE28_016530 IPR000891 Pyruvate carboxyltransferase ABE28_016535 IPR014359 Ketol-acid reductoisomerase, prokaryotic ABE28_016535 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_016535 IPR013023 Ketol-acid reductoisomerase ABE28_016535 IPR000506 Ketol-acid reductoisomerase, C-terminal ABE28_016535 IPR036291 NAD(P)-binding domain superfamily ABE28_016535 IPR013116 Ketol-acid reductoisomerase, N-terminal ABE28_016540 IPR002912 ACT domain ABE28_016540 IPR019455 Acetolactate synthase, small subunit, C-terminal ABE28_016540 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ABE28_016540 IPR039557 AHAS, ACT domain ABE28_016540 IPR004789 Acetolactate synthase, small subunit ABE28_016545 IPR029061 Thiamin diphosphate-binding fold ABE28_016545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_016545 IPR039368 Acetolactate synthase large subunit, TPP binding domain ABE28_016545 IPR012000 Thiamine pyrophosphate enzyme, central domain ABE28_016545 IPR012846 Acetolactate synthase, large subunit, biosynthetic ABE28_016545 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_016545 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_016605 IPR003439 ABC transporter-like ABE28_016605 IPR017871 ABC transporter, conserved site ABE28_016605 IPR003593 AAA+ ATPase domain ABE28_016605 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016625 IPR020935 Phosphodiesterase YfcE, conserved site ABE28_016625 IPR041802 YfcE-like, metallophosphatase domain ABE28_016625 IPR029052 Metallo-dependent phosphatase-like ABE28_016625 IPR000979 Phosphodiesterase MJ0936/Vps29 ABE28_016625 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type ABE28_016630 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016630 IPR020922 dITP/XTP pyrophosphatase ABE28_016630 IPR002637 Ham1-like protein ABE28_016635 IPR019606 GerMN domain ABE28_016640 IPR033134 Asp/Glu racemase, active site 2 ABE28_016640 IPR004391 Glutamate racemase ABE28_016640 IPR015942 Asp/Glu/hydantoin racemase ABE28_016640 IPR018187 Asp/Glu racemase, active site 1 ABE28_016640 IPR001920 Asp/Glu racemase ABE28_016645 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016645 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016645 IPR000835 MarR-type HTH domain ABE28_016650 IPR000792 Transcription regulator LuxR, C-terminal ABE28_016650 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016650 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_016655 IPR029069 HotDog domain superfamily ABE28_016655 IPR006683 Thioesterase domain ABE28_016660 IPR009051 Alpha-helical ferredoxin ABE28_016660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016660 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal ABE28_016660 IPR012675 Beta-grasp domain superfamily ABE28_016660 IPR036010 2Fe-2S ferredoxin-like superfamily ABE28_016660 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein ABE28_016660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016665 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal ABE28_016665 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria ABE28_016665 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ABE28_016665 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_016665 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily ABE28_016665 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ABE28_016665 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site ABE28_016670 IPR011138 Succinate dehydrogenase cytochrome b558 subunit ABE28_016670 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute ABE28_016670 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit ABE28_016670 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit ABE28_016675 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily ABE28_016675 IPR019642 Protein of unknown function DUF2507 ABE28_016680 IPR036393 Acetylglutamate kinase-like superfamily ABE28_016680 IPR002912 ACT domain ABE28_016680 IPR041740 Aspartokinase catalytic domain ABE28_016680 IPR005260 Aspartate kinase, monofunctional class ABE28_016680 IPR001341 Aspartate kinase ABE28_016680 IPR018042 Aspartate kinase, conserved site ABE28_016680 IPR027795 CASTOR, ACT domain ABE28_016680 IPR001048 Aspartate/glutamate/uridylate kinase ABE28_016685 IPR000305 GIY-YIG endonuclease ABE28_016685 IPR004791 UvrABC system, subunit C ABE28_016685 IPR010994 RuvA domain 2-like ABE28_016685 IPR001943 UVR domain ABE28_016685 IPR036876 UVR domain superfamily ABE28_016685 IPR035901 GIY-YIG endonuclease superfamily ABE28_016685 IPR001162 UvrC family homology region ABE28_016685 IPR038476 UvrC homology region 2 superfamily ABE28_016690 IPR013766 Thioredoxin domain ABE28_016690 IPR005746 Thioredoxin ABE28_016690 IPR036249 Thioredoxin-like superfamily ABE28_016690 IPR017937 Thioredoxin, conserved site ABE28_016695 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal ABE28_016695 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal ABE28_016695 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal ABE28_016695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016695 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_016695 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site ABE28_016695 IPR001308 Electron transfer flavoprotein alpha subunit/FixB ABE28_016700 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site ABE28_016700 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016700 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal ABE28_016700 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal ABE28_016700 IPR012255 Electron transfer flavoprotein, beta subunit ABE28_016705 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_016705 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_016705 IPR029045 ClpP/crotonase-like domain superfamily ABE28_016710 IPR009057 Homeobox-like domain superfamily ABE28_016710 IPR013570 Transcription regulator YsiA, C-terminal ABE28_016710 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_016710 IPR001647 DNA-binding HTH domain, TetR-type ABE28_016715 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_016715 IPR020845 AMP-binding, conserved site ABE28_016715 IPR042099 AMP-dependent synthetase-like superfamily ABE28_016715 IPR000873 AMP-dependent synthetase/ligase ABE28_016720 IPR007140 Protein of unknown function DUF350 ABE28_016725 IPR036063 Smr domain superfamily ABE28_016725 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016725 IPR007696 DNA mismatch repair protein MutS, core ABE28_016725 IPR000432 DNA mismatch repair protein MutS, C-terminal ABE28_016725 IPR002625 Smr domain ABE28_016725 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_016725 IPR005747 Endonuclease MutS2 ABE28_016730 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 ABE28_016730 IPR037160 DNA polymerase, thumb domain superfamily ABE28_016730 IPR022311 Uncharacterised conserved protein UCP005047, YshC ABE28_016730 IPR027421 DNA polymerase lambda lyase domain superfamily ABE28_016730 IPR010996 DNA polymerase beta-like, N-terminal domain ABE28_016730 IPR004013 PHP domain ABE28_016730 IPR029398 DNA polymerase beta, thumb domain ABE28_016730 IPR002054 DNA-directed DNA polymerase X ABE28_016730 IPR016195 Polymerase/histidinol phosphatase-like ABE28_016730 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_016735 IPR003825 Colicin V production, CvpA ABE28_016740 IPR036192 Cell division protein ZapA-like superfamily ABE28_016740 IPR023688 Cell division protein ZapA, firmicutes ABE28_016740 IPR007838 Cell division protein ZapA-like ABE28_016745 IPR024567 Ribonuclease HII/HIII domain ABE28_016745 IPR004641 Ribonuclease HIII ABE28_016745 IPR012295 TBP domain superfamily ABE28_016745 IPR024568 Ribonuclease HIII, N-terminal ABE28_016745 IPR012337 Ribonuclease H-like superfamily ABE28_016745 IPR001352 Ribonuclease HII/HIII ABE28_016745 IPR036397 Ribonuclease H superfamily ABE28_016750 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 ABE28_016750 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit ABE28_016750 IPR012340 Nucleic acid-binding, OB-fold ABE28_016750 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily ABE28_016750 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain ABE28_016750 IPR005121 Ferrodoxin-fold anticodon-binding domain ABE28_016750 IPR009061 Putative DNA-binding domain superfamily ABE28_016750 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain ABE28_016750 IPR005146 B3/B4 tRNA-binding domain ABE28_016750 IPR005147 tRNA synthetase, B5-domain ABE28_016750 IPR002547 tRNA-binding domain ABE28_016755 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial ABE28_016755 IPR002319 Phenylalanyl-tRNA synthetase ABE28_016755 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm ABE28_016755 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal ABE28_016755 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit ABE28_016755 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_016760 IPR013123 RNA 2-O ribose methyltransferase, substrate binding ABE28_016760 IPR029064 50S ribosomal protein L30e-like ABE28_016760 IPR001537 tRNA/rRNA methyltransferase, SpoU type ABE28_016760 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_016760 IPR029028 Alpha/beta knot methyltransferases ABE28_016765 IPR017525 Small, acid-soluble spore protein I ABE28_016785 IPR025889 General stress protein 17M-like domain ABE28_016785 IPR019060 Domain of unknown function DUF2382 ABE28_016790 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016790 IPR004017 Cysteine-rich domain ABE28_016790 IPR012257 Glycolate oxidase, iron-sulphur subunit ABE28_016790 IPR009051 Alpha-helical ferredoxin ABE28_016790 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016795 IPR016164 FAD-linked oxidase-like, C-terminal ABE28_016795 IPR036318 FAD-binding, type PCMH-like superfamily ABE28_016795 IPR016166 FAD-binding domain, PCMH-type ABE28_016795 IPR004113 FAD-linked oxidase, C-terminal ABE28_016795 IPR004490 Glycolate oxidase subunit GlcD ABE28_016795 IPR006094 FAD linked oxidase, N-terminal ABE28_016795 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_016800 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_016800 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_016800 IPR008599 Putative sugar diacid recognition ABE28_016800 IPR041522 CdaR, GGDEF-like domain ABE28_016805 IPR003804 L-lactate permease ABE28_016810 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016810 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016810 IPR000524 Transcription regulator HTH, GntR ABE28_016810 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_016810 IPR011711 GntR, C-terminal ABE28_016815 IPR004017 Cysteine-rich domain ABE28_016815 IPR022822 Lactate utilization protein A ABE28_016820 IPR037171 NagB/RpiA transferase-like ABE28_016820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016820 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_016820 IPR022825 Lactate utilization protein B ABE28_016820 IPR004452 4Fe-4S binding protein ABE28_016820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016820 IPR024569 4Fe-4S binding protein, C-terminal ABE28_016820 IPR009051 Alpha-helical ferredoxin ABE28_016820 IPR003741 LUD domain ABE28_016825 IPR022823 Lactate utilization protein C ABE28_016825 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_016825 IPR003741 LUD domain ABE28_016825 IPR037171 NagB/RpiA transferase-like ABE28_016830 IPR023367 Peptidase M42, domain 2 ABE28_016830 IPR008007 Peptidase M42 ABE28_016850 IPR010718 Protein of unknown function DUF1294 ABE28_016855 IPR035566 Ribosomal protein L20, C-terminal ABE28_016855 IPR005813 Ribosomal protein L20 ABE28_016860 IPR018265 Ribosomal protein L35, conserved site ABE28_016860 IPR021137 Ribosomal protein L35 ABE28_016860 IPR037229 Ribosomal protein L35 superfamily ABE28_016860 IPR001706 Ribosomal protein L35, non-mitochondrial ABE28_016865 IPR019815 Translation initiation factor 3, C-terminal ABE28_016865 IPR001288 Translation initiation factor 3 ABE28_016865 IPR019813 Translation initiation factor 3, conserved site ABE28_016865 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily ABE28_016865 IPR019814 Translation initiation factor 3, N-terminal ABE28_016865 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily ABE28_016870 IPR000182 GNAT domain ABE28_016870 IPR016181 Acyl-CoA N-acyltransferase ABE28_016875 IPR012676 TGS-like ABE28_016875 IPR033728 Threonine-tRNA ligase catalytic core domain ABE28_016875 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ABE28_016875 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ABE28_016875 IPR002320 Threonine-tRNA ligase, class IIa ABE28_016875 IPR004154 Anticodon-binding ABE28_016875 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_016875 IPR012675 Beta-grasp domain superfamily ABE28_016875 IPR036621 Anticodon-binding domain superfamily ABE28_016875 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ABE28_016875 IPR004095 TGS ABE28_016880 IPR014199 Sporulation protein YtxC ABE28_016885 IPR003593 AAA+ ATPase domain ABE28_016885 IPR009928 Primosomal DnaI, N-terminal ABE28_016885 IPR002611 IstB-like ATP-binding protein ABE28_016885 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016890 IPR006343 DnaD domain ABE28_016895 IPR003796 Ribonucleotide reductase regulator NrdR-like ABE28_016895 IPR005144 ATP-cone domain ABE28_016900 IPR017716 S-adenosylmethionine decarboxylase proenzyme ABE28_016900 IPR016067 S-adenosylmethionine decarboxylase, core ABE28_016900 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic ABE28_016905 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ABE28_016905 IPR036291 NAD(P)-binding domain superfamily ABE28_016905 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ABE28_016905 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ABE28_016905 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ABE28_016905 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ABE28_016910 IPR001977 Dephospho-CoA kinase ABE28_016910 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016915 IPR014205 Sporulation protein YtaF ABE28_016915 IPR003810 Putative manganese efflux pump ABE28_016920 IPR020629 Formamidopyrimidine-DNA glycosylase ABE28_016920 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding ABE28_016920 IPR010663 Zinc finger, FPG/IleRS-type ABE28_016920 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type ABE28_016920 IPR010979 Ribosomal protein S13-like, H2TH ABE28_016920 IPR035937 MutM-like, N-terminal ABE28_016920 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain ABE28_016920 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site ABE28_016925 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABE28_016925 IPR001098 DNA-directed DNA polymerase, family A, palm domain ABE28_016925 IPR002421 5'-3' exonuclease, N-terminal ABE28_016925 IPR020045 DNA polymerase I-like, H3TH domain ABE28_016925 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal ABE28_016925 IPR018320 DNA polymerase 1 ABE28_016925 IPR002562 3'-5' exonuclease domain ABE28_016925 IPR019760 DNA-directed DNA polymerase, family A, conserved site ABE28_016925 IPR002298 DNA polymerase A ABE28_016925 IPR036397 Ribonuclease H superfamily ABE28_016925 IPR012337 Ribonuclease H-like superfamily ABE28_016925 IPR029060 PIN-like domain superfamily ABE28_016925 IPR008918 Helix-hairpin-helix motif, class 2 ABE28_016930 IPR010200 HflC ABE28_016930 IPR036013 Band 7/SPFH domain superfamily ABE28_016930 IPR001107 Band 7 domain ABE28_016935 IPR001107 Band 7 domain ABE28_016935 IPR036013 Band 7/SPFH domain superfamily ABE28_016935 IPR001972 Stomatin family ABE28_016935 IPR020980 Menbrane protein HflK, N-terminal ABE28_016935 IPR010201 HflK ABE28_016940 IPR013767 PAS fold ABE28_016940 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_016940 IPR035965 PAS domain superfamily ABE28_016940 IPR000014 PAS domain ABE28_016940 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_016940 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_016940 IPR005467 Histidine kinase domain ABE28_016940 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_016940 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_016940 IPR031967 PhoR, single Cache-like domain ABE28_016945 IPR039420 Transcriptional regulatory protein WalR-like ABE28_016945 IPR001789 Signal transduction response regulator, receiver domain ABE28_016945 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_016945 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_016945 IPR011006 CheY-like superfamily ABE28_016945 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016950 IPR001557 L-lactate/malate dehydrogenase ABE28_016950 IPR011275 Malate dehydrogenase, type 3 ABE28_016950 IPR022383 Lactate/malate dehydrogenase, C-terminal ABE28_016950 IPR001236 Lactate/malate dehydrogenase, N-terminal ABE28_016950 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ABE28_016950 IPR036291 NAD(P)-binding domain superfamily ABE28_016955 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic ABE28_016955 IPR024084 Isopropylmalate dehydrogenase-like domain ABE28_016955 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site ABE28_016960 IPR016143 Citrate synthase-like, small alpha subdomain ABE28_016960 IPR002020 Citrate synthase ABE28_016960 IPR019810 Citrate synthase active site ABE28_016960 IPR024176 Citrate synthase, bacterial-type ABE28_016960 IPR036969 Citrate synthase superfamily ABE28_016960 IPR016142 Citrate synthase-like, large alpha subdomain ABE28_016960 IPR011278 2-methylcitrate synthase/citrate synthase type I ABE28_016965 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABE28_016970 IPR002549 Transmembrane protein TqsA-like ABE28_016970 IPR014227 Putative transport protein YtvI-like ABE28_016975 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site ABE28_016975 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_016975 IPR040442 Pyruvate kinase-like domain superfamily ABE28_016975 IPR039556 ICL/PEPM domain ABE28_016975 IPR006254 Isocitrate lyase ABE28_016980 IPR011076 Malate synthase-like superfamily ABE28_016980 IPR001465 Malate synthase ABE28_016980 IPR019830 Malate synthase, conserved site ABE28_016980 IPR006252 Malate synthase A ABE28_016990 IPR015806 Pyruvate kinase, insert domain superfamily ABE28_016990 IPR008279 PEP-utilising enzyme, mobile domain ABE28_016990 IPR036637 Phosphohistidine domain superfamily ABE28_016990 IPR001697 Pyruvate kinase ABE28_016990 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_016990 IPR040442 Pyruvate kinase-like domain superfamily ABE28_016990 IPR036918 Pyruvate kinase, C-terminal domain superfamily ABE28_016990 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_016990 IPR015795 Pyruvate kinase, C-terminal ABE28_016990 IPR018209 Pyruvate kinase, active site ABE28_016990 IPR015793 Pyruvate kinase, barrel ABE28_016995 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic ABE28_016995 IPR022953 ATP-dependent 6-phosphofructokinase ABE28_016995 IPR035966 Phosphofructokinase superfamily ABE28_016995 IPR000023 Phosphofructokinase domain ABE28_016995 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type ABE28_016995 IPR015912 Phosphofructokinase, conserved site ABE28_017000 IPR001095 Acetyl-CoA carboxylase, alpha subunit ABE28_017000 IPR029045 ClpP/crotonase-like domain superfamily ABE28_017000 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal ABE28_017005 IPR029045 ClpP/crotonase-like domain superfamily ABE28_017005 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal ABE28_017005 IPR041010 Acetyl-coA carboxylase zinc finger domain ABE28_017005 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit ABE28_017005 IPR034733 Acetyl-CoA carboxylase ABE28_017010 IPR011711 GntR, C-terminal ABE28_017010 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_017010 IPR000524 Transcription regulator HTH, GntR ABE28_017010 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017010 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017015 IPR036291 NAD(P)-binding domain superfamily ABE28_017015 IPR015884 Malic enzyme, conserved site ABE28_017015 IPR012301 Malic enzyme, N-terminal domain ABE28_017015 IPR037062 Malic enzyme, N-terminal domain superfamily ABE28_017015 IPR012302 Malic enzyme, NAD-binding ABE28_017015 IPR001891 Malic oxidoreductase ABE28_017020 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain ABE28_017020 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_017020 IPR040982 DNA polymerase III alpha subunit finger domain ABE28_017020 IPR029460 DNA polymerase, helix-hairpin-helix motif ABE28_017020 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type ABE28_017020 IPR004805 DNA polymerase III, alpha subunit ABE28_017020 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain ABE28_017020 IPR004013 PHP domain ABE28_017020 IPR016195 Polymerase/histidinol phosphatase-like ABE28_017025 IPR025689 Sporulation protein YtrH ABE28_017035 IPR003156 DHHA1 domain ABE28_017035 IPR038763 DHH phosphoesterase superfamily ABE28_017035 IPR001667 DDH domain ABE28_017045 IPR000644 CBS domain ABE28_017045 IPR010766 DRTGG ABE28_017045 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_017045 IPR006683 Thioesterase domain ABE28_017045 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017045 IPR000524 Transcription regulator HTH, GntR ABE28_017045 IPR029069 HotDog domain superfamily ABE28_017045 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017065 IPR001279 Metallo-beta-lactamase ABE28_017065 IPR022877 Protein of unknown funcion UPF0173 ABE28_017065 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017070 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABE28_017070 IPR001714 Peptidase M24, methionine aminopeptidase ABE28_017070 IPR000994 Peptidase M24 ABE28_017070 IPR000587 Creatinase, N-terminal ABE28_017070 IPR036005 Creatinase/aminopeptidase-like ABE28_017070 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_017080 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017080 IPR006015 Universal stress protein A family ABE28_017080 IPR006016 UspA ABE28_017085 IPR029419 Argininosuccinate lyase, C-terminal ABE28_017085 IPR008948 L-Aspartase-like ABE28_017085 IPR009049 Argininosuccinate lyase ABE28_017085 IPR022761 Fumarate lyase, N-terminal ABE28_017085 IPR000362 Fumarate lyase family ABE28_017085 IPR020557 Fumarate lyase, conserved site ABE28_017085 IPR024083 Fumarase/histidase, N-terminal ABE28_017090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017090 IPR018223 Argininosuccinate synthase, conserved site ABE28_017090 IPR001518 Argininosuccinate synthase ABE28_017090 IPR023434 Argininosuccinate synthase, type 1 subfamily ABE28_017090 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body ABE28_017100 IPR001453 MoaB/Mog domain ABE28_017100 IPR008284 Molybdenum cofactor biosynthesis, conserved site ABE28_017100 IPR036425 MoaB/Mog-like domain superfamily ABE28_017100 IPR012245 Molybdenum cofactor biosynthesis protein MoaB ABE28_017105 IPR024787 EcsC protein ABE28_017110 IPR004372 Acetate/propionate kinase ABE28_017110 IPR000890 Aliphatic acid kinase, short-chain ABE28_017110 IPR023865 Aliphatic acid kinase, short-chain, conserved site ABE28_017115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_017115 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted ABE28_017115 IPR003356 DNA methylase, adenine-specific ABE28_017120 IPR002065 Thiol peroxidase Tpx ABE28_017120 IPR013740 Redoxin ABE28_017120 IPR018219 Thiol peroxidase conserved site ABE28_017120 IPR013766 Thioredoxin domain ABE28_017120 IPR036249 Thioredoxin-like superfamily ABE28_017130 IPR014229 Sporulation protein YtfJ ABE28_017140 IPR010432 RDD ABE28_017145 IPR002142 Peptidase S49 ABE28_017145 IPR004635 Peptidase S49, SppA ABE28_017145 IPR029045 ClpP/crotonase-like domain superfamily ABE28_017150 IPR005255 PdxA family ABE28_017155 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ABE28_017155 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ABE28_017155 IPR042213 Nucleotide-binding, C-terminal domain superfamily ABE28_017155 IPR031475 Nucleotide-binding C-terminal domain ABE28_017160 IPR004684 2-keto-3-deoxygluconate permease ABE28_017165 IPR001789 Signal transduction response regulator, receiver domain ABE28_017165 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_017165 IPR025944 Sigma-54 interaction domain, conserved site ABE28_017165 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_017165 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017165 IPR002197 DNA binding HTH domain, Fis-type ABE28_017165 IPR009057 Homeobox-like domain superfamily ABE28_017165 IPR011006 CheY-like superfamily ABE28_017165 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_017165 IPR003593 AAA+ ATPase domain ABE28_017170 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_017170 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_017170 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal ABE28_017170 IPR002504 NAD kinase ABE28_017180 IPR003593 AAA+ ATPase domain ABE28_017180 IPR003439 ABC transporter-like ABE28_017180 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017185 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_017185 IPR035906 MetI-like superfamily ABE28_017190 IPR002767 Thiamine-binding protein ABE28_017190 IPR029756 MTH1187/YkoF-like ABE28_017195 IPR015168 SsuA/THI5-like ABE28_017195 IPR027939 NMT1/THI5 family ABE28_017200 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria ABE28_017205 IPR000620 EamA domain ABE28_017205 IPR004626 RarD protein ABE28_017210 IPR032466 Metal-dependent hydrolase ABE28_017210 IPR013108 Amidohydrolase 3 ABE28_017210 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_017210 IPR033932 YtcJ like ABE28_017215 IPR020845 AMP-binding, conserved site ABE28_017215 IPR000873 AMP-dependent synthetase/ligase ABE28_017215 IPR042099 AMP-dependent synthetase-like superfamily ABE28_017215 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_017220 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_017220 IPR038300 SASP, alpha/beta-type superfamily ABE28_017220 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_017225 IPR003720 tRNA sulfurtransferase ThiI ABE28_017225 IPR004114 THUMP domain ABE28_017225 IPR020536 Thil, AANH domain ABE28_017225 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017230 IPR000192 Aminotransferase class V domain ABE28_017230 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_017230 IPR016454 Cysteine desulfurase ABE28_017230 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017230 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_017240 IPR010379 Septation ring formation regulator EzrA ABE28_017245 IPR010140 Histidinol phosphate phosphatase, HisJ ABE28_017245 IPR004013 PHP domain ABE28_017245 IPR016195 Polymerase/histidinol phosphatase-like ABE28_017250 IPR001647 DNA-binding HTH domain, TetR-type ABE28_017250 IPR032551 HTH-type transcriptional repressor, C-terminal ABE28_017250 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_017250 IPR009057 Homeobox-like domain superfamily ABE28_017255 IPR029016 GAF-like domain superfamily ABE28_017255 IPR003018 GAF domain ABE28_017255 IPR000614 Free Met sulfoxide reductase conserved site ABE28_017260 IPR029787 Nucleotide cyclase ABE28_017260 IPR000160 GGDEF domain ABE28_017260 IPR029016 GAF-like domain superfamily ABE28_017265 IPR036986 RNA-binding S4 domain superfamily ABE28_017265 IPR002942 RNA-binding S4 domain ABE28_017265 IPR022801 Ribosomal protein S4/S9 ABE28_017265 IPR005709 Ribosomal protein S4, bacterial-type ABE28_017265 IPR001912 Ribosomal protein S4/S9, N-terminal ABE28_017265 IPR018079 Ribosomal protein S4, conserved site ABE28_017290 IPR024088 Tyrosine-tRNA ligase, bacterial-type ABE28_017290 IPR002307 Tyrosine-tRNA ligase ABE28_017290 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 ABE28_017290 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_017290 IPR036986 RNA-binding S4 domain superfamily ABE28_017290 IPR002942 RNA-binding S4 domain ABE28_017290 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017290 IPR002305 Aminoacyl-tRNA synthetase, class Ic ABE28_017295 IPR001264 Glycosyl transferase, family 51 ABE28_017295 IPR001460 Penicillin-binding protein, transpeptidase ABE28_017295 IPR036950 Penicillin binding protein transglycosylase domain ABE28_017295 IPR023346 Lysozyme-like domain superfamily ABE28_017295 IPR012338 Beta-lactamase/transpeptidase-like ABE28_017300 IPR042099 AMP-dependent synthetase-like superfamily ABE28_017300 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_017300 IPR000873 AMP-dependent synthetase/ligase ABE28_017300 IPR020845 AMP-binding, conserved site ABE28_017305 IPR016181 Acyl-CoA N-acyltransferase ABE28_017305 IPR024699 Acetoin utilization protein AcuA ABE28_017305 IPR000182 GNAT domain ABE28_017310 IPR000644 CBS domain ABE28_017315 IPR037138 Histone deacetylase domain superfamily ABE28_017315 IPR023801 Histone deacetylase domain ABE28_017315 IPR000286 Histone deacetylase family ABE28_017315 IPR003085 Acetoin utilization protein AcuC ABE28_017315 IPR023696 Ureohydrolase domain superfamily ABE28_017325 IPR000843 LacI-type HTH domain ABE28_017325 IPR028082 Periplasmic binding protein-like I ABE28_017325 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_017325 IPR006377 Catabolite control protein A ABE28_017330 IPR002701 Chorismate mutase II, prokaryotic-type ABE28_017330 IPR036979 Chorismate mutase domain superfamily ABE28_017330 IPR010954 Chorismate mutase, Firmicutes/Deinococcus ABE28_017330 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 ABE28_017330 IPR006218 DAHP synthetase I/KDSA ABE28_017330 IPR013785 Aldolase-type TIM barrel ABE28_017335 IPR020823 Cell division protein FtsA ABE28_017335 IPR003494 SHS2 domain inserted in FtsA ABE28_017345 IPR022551 Protein of unknown function DUF2847 ABE28_017345 IPR036249 Thioredoxin-like superfamily ABE28_017350 IPR024623 Uncharacterised protein family YtxH ABE28_017355 IPR009293 Uncharacterised protein family UPF0478 ABE28_017360 IPR000787 Peptidase M29 ABE28_017360 IPR035097 Peptidase M29, N-terminal ABE28_017370 IPR003593 AAA+ ATPase domain ABE28_017370 IPR002543 FtsK domain ABE28_017370 IPR041027 FtsK alpha domain ABE28_017370 IPR018541 FtsK gamma domain ABE28_017370 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017370 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017370 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017375 IPR002933 Peptidase M20 ABE28_017375 IPR017439 Amidohydrolase ABE28_017375 IPR011650 Peptidase M20, dimerisation domain ABE28_017375 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_017380 IPR010838 Protein of unknown unction DUF1444 ABE28_017385 IPR036249 Thioredoxin-like superfamily ABE28_017385 IPR013766 Thioredoxin domain ABE28_017395 IPR019884 YtoQ family protein ABE28_017400 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_017400 IPR009057 Homeobox-like domain superfamily ABE28_017400 IPR029442 GyrI-like small molecule binding domain ABE28_017400 IPR018060 DNA binding HTH domain, AraC-type ABE28_017400 IPR010499 Bacterial transcription activator, effector binding ABE28_017400 IPR018062 HTH domain AraC-type, conserved site ABE28_017400 IPR020449 Transcription regulator HTH, AraC- type ABE28_017405 IPR002786 Inosine/xanthosine triphosphatase ABE28_017405 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 ABE28_017405 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_017410 IPR023367 Peptidase M42, domain 2 ABE28_017410 IPR008007 Peptidase M42 ABE28_017420 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017420 IPR001279 Metallo-beta-lactamase ABE28_017425 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_017425 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type ABE28_017430 IPR025547 YtzH-like protein ABE28_017435 IPR002575 Aminoglycoside phosphotransferase ABE28_017435 IPR011009 Protein kinase-like domain superfamily ABE28_017445 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal ABE28_017445 IPR005218 Diacylglycerol/lipid kinase ABE28_017445 IPR001206 Diacylglycerol kinase, catalytic domain ABE28_017445 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_017450 IPR012397 Pullulan 6-glucanohydrolase ABE28_017455 IPR009097 Cyclic phosphodiesterase ABE28_017455 IPR014051 Phosphoesterase, HXTX ABE28_017455 IPR004175 RNA 2',3'-cyclic phosphodiesterase ABE28_017460 IPR001046 NRAMP family ABE28_017470 IPR005784 D-amino acid aminotransferase ABE28_017470 IPR001544 Aminotransferase class IV ABE28_017470 IPR036038 Aminotransferase-like, PLP-dependent enzymes ABE28_017470 IPR018300 Aminotransferase, class IV, conserved site ABE28_017475 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ABE28_017475 IPR010964 Peptidase M20A, peptidase V-related ABE28_017475 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_017475 IPR002933 Peptidase M20 ABE28_017480 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 IPR036291 NAD(P)-binding domain superfamily ABE28_017485 IPR032816 SNARE associated Golgi protein ABE28_017490 IPR000223 Peptidase S26A, signal peptidase I ABE28_017490 IPR019757 Peptidase S26A, signal peptidase I, lysine active site ABE28_017490 IPR036286 LexA/Signal peptidase-like superfamily ABE28_017490 IPR019758 Peptidase S26A, signal peptidase I, conserved site ABE28_017490 IPR019533 Peptidase S26 ABE28_017490 IPR019756 Peptidase S26A, signal peptidase I, serine active site ABE28_017510 IPR014776 Tetrapyrrole methylase, subdomain 2 ABE28_017510 IPR006366 Uroporphyrin-III C-methyltransferase ABE28_017510 IPR000878 Tetrapyrrole methylase ABE28_017510 IPR035996 Tetrapyrrole methylase superfamily ABE28_017510 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily ABE28_017510 IPR014777 Tetrapyrrole methylase, subdomain 1 ABE28_017510 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site ABE28_017515 IPR039793 Uroporphyrinogen-III synthase ABE28_017515 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase ABE28_017515 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily ABE28_017530 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal ABE28_017530 IPR001236 Lactate/malate dehydrogenase, N-terminal ABE28_017530 IPR022383 Lactate/malate dehydrogenase, C-terminal ABE28_017530 IPR018177 L-lactate dehydrogenase, active site ABE28_017530 IPR036291 NAD(P)-binding domain superfamily ABE28_017530 IPR011304 L-lactate dehydrogenase ABE28_017530 IPR001557 L-lactate/malate dehydrogenase ABE28_017535 IPR003804 L-lactate permease ABE28_017540 IPR036249 Thioredoxin-like superfamily ABE28_017540 IPR001853 DSBA-like thioredoxin domain ABE28_017550 IPR001647 DNA-binding HTH domain, TetR-type ABE28_017550 IPR009057 Homeobox-like domain superfamily ABE28_017555 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_017555 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_017555 IPR015590 Aldehyde dehydrogenase domain ABE28_017555 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent ABE28_017555 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_017555 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_017555 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_017565 IPR005524 Predicted permease DUF318 ABE28_017575 IPR001295 Dihydroorotate dehydrogenase, conserved site ABE28_017575 IPR005994 Guanosine monophosphate reductase, type2 ABE28_017575 IPR013785 Aldolase-type TIM barrel ABE28_017575 IPR015875 IMP dehydrogenase / GMP reductase, conserved site ABE28_017575 IPR001093 IMP dehydrogenase/GMP reductase ABE28_017580 IPR013987 PhnA protein, N-terminal ABE28_017580 IPR013988 PhnA protein, C-terminal ABE28_017580 IPR004624 PhnA protein ABE28_017585 IPR001789 Signal transduction response regulator, receiver domain ABE28_017585 IPR011006 CheY-like superfamily ABE28_017585 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_017585 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_017585 IPR039420 Transcriptional regulatory protein WalR-like ABE28_017585 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017590 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_017590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_017590 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_017590 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_017590 IPR005467 Histidine kinase domain ABE28_017590 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_017595 IPR003439 ABC transporter-like ABE28_017595 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017595 IPR003593 AAA+ ATPase domain ABE28_017600 IPR027022 ABC transporter permease protein, BceB-type ABE28_017625 IPR041492 Haloacid dehalogenase-like hydrolase ABE28_017625 IPR023214 HAD superfamily ABE28_017625 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_017625 IPR006323 Phosphonoacetaldehyde hydrolase ABE28_017625 IPR036412 HAD-like superfamily ABE28_017630 IPR000192 Aminotransferase class V domain ABE28_017630 IPR012703 2-aminoethylphosphonate--pyruvate transaminase ABE28_017630 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017630 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_017630 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_017630 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase ABE28_017640 IPR035906 MetI-like superfamily ABE28_017640 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_017645 IPR013611 Transport-associated OB, type 2 ABE28_017645 IPR017871 ABC transporter, conserved site ABE28_017645 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_017645 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017645 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit ABE28_017645 IPR003439 ABC transporter-like ABE28_017645 IPR003593 AAA+ ATPase domain ABE28_017645 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ABE28_017650 IPR001034 DeoR-type HTH domain ABE28_017650 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017650 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ABE28_017650 IPR037171 NagB/RpiA transferase-like ABE28_017650 IPR014036 DeoR C-terminal sensor domain ABE28_017650 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017655 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017655 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ABE28_017655 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ABE28_017655 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ABE28_017655 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_017655 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ABE28_017655 IPR023546 Methylated-DNA--protein-cysteine methyltransferase ABE28_017660 IPR004026 Ada DNA repair, metal-binding ABE28_017660 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ABE28_017660 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_017660 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ABE28_017660 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ABE28_017660 IPR018062 HTH domain AraC-type, conserved site ABE28_017660 IPR018060 DNA binding HTH domain, AraC-type ABE28_017660 IPR009057 Homeobox-like domain superfamily ABE28_017660 IPR016221 Bifunctional regulatory protein Ada ABE28_017660 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ABE28_017660 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017660 IPR035451 Ada-like domain superfamily ABE28_017670 IPR001034 DeoR-type HTH domain ABE28_017670 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017670 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017675 IPR020103 Pseudouridine synthase, catalytic domain superfamily ABE28_017675 IPR006145 Pseudouridine synthase, RsuA/RluA ABE28_017675 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F ABE28_017675 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site ABE28_017675 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain ABE28_017675 IPR002942 RNA-binding S4 domain ABE28_017675 IPR036986 RNA-binding S4 domain superfamily ABE28_017680 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_017680 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_017680 IPR002797 Polysaccharide biosynthesis protein ABE28_017685 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like ABE28_017685 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017685 IPR023166 HI0933-like insert domain superfamily ABE28_017700 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 IPR036291 NAD(P)-binding domain superfamily ABE28_017700 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_017705 IPR020296 Sporulation protein Cse60 ABE28_017715 IPR001763 Rhodanese-like domain ABE28_017715 IPR036873 Rhodanese-like domain superfamily ABE28_017720 IPR020846 Major facilitator superfamily domain ABE28_017720 IPR036259 MFS transporter superfamily ABE28_017720 IPR011701 Major facilitator superfamily ABE28_017725 IPR008279 PEP-utilising enzyme, mobile domain ABE28_017725 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding ABE28_017725 IPR013815 ATP-grasp fold, subdomain 1 ABE28_017725 IPR036637 Phosphohistidine domain superfamily ABE28_017730 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ABE28_017730 IPR023663 NADPH dehydrogenase ABE28_017730 IPR013785 Aldolase-type TIM barrel ABE28_017740 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_017740 IPR023210 NADP-dependent oxidoreductase domain ABE28_017740 IPR020471 Aldo/keto reductase ABE28_017740 IPR018170 Aldo/keto reductase, conserved site ABE28_017745 IPR036259 MFS transporter superfamily ABE28_017745 IPR011701 Major facilitator superfamily ABE28_017745 IPR020846 Major facilitator superfamily domain ABE28_017750 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017750 IPR002577 Helix-turn-helix, HxlR type ABE28_017750 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017765 IPR002668 Concentrative nucleoside transporter N-terminal domain ABE28_017765 IPR011657 Concentrative nucleoside transporter C-terminal domain ABE28_017765 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ABE28_017765 IPR008276 Concentrative nucleoside transporter ABE28_017770 IPR029058 Alpha/Beta hydrolase fold ABE28_017770 IPR012354 Esterase/lipase ABE28_017770 IPR022742 Serine aminopeptidase, S33 ABE28_017790 IPR009057 Homeobox-like domain superfamily ABE28_017790 IPR001647 DNA-binding HTH domain, TetR-type ABE28_017790 IPR013572 Transcription regulator MAATS, C-terminal ABE28_017790 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_017790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_017800 IPR024924 7-carboxy-7-deazaguanine synthase-like ABE28_017800 IPR017742 7-carboxy-7-deazaguanine synthase ABE28_017800 IPR007197 Radical SAM ABE28_017800 IPR013785 Aldolase-type TIM barrel ABE28_017805 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family ABE28_017805 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily ABE28_017810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017810 IPR018317 Queuosine biosynthesis protein QueC ABE28_017815 IPR033479 Double Cache domain 1 ABE28_017815 IPR003660 HAMP domain ABE28_017815 IPR029151 Periplasmic sensor-like domain superfamily ABE28_017815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_017815 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_017825 IPR008337 Capsule biosynthesis protein CapB ABE28_017825 IPR036565 Mur-like, catalytic domain superfamily ABE28_017825 IPR013221 Mur ligase, central ABE28_017830 IPR008338 Capsule biosynthesis protein CapC ABE28_017835 IPR019079 Capsule synthesis protein, CapA ABE28_017835 IPR029052 Metallo-dependent phosphatase-like ABE28_017840 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_017845 IPR038128 Poly-gamma-glutamate hydrolase superfamily ABE28_017845 IPR008585 Poly-gamma-glutamate hydrolase ABE28_017850 IPR038765 Papain-like cysteine peptidase superfamily ABE28_017850 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_017860 IPR000802 Arsenical pump membrane protein, ArsB ABE28_017865 IPR003660 HAMP domain ABE28_017865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_017865 IPR029151 Periplasmic sensor-like domain superfamily ABE28_017865 IPR033479 Double Cache domain 1 ABE28_017875 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017875 IPR024775 DinB-like domain ABE28_017875 IPR023774 Putative metal-dependent hydrolase YfiT ABE28_017880 IPR004761 Spore germination GerAB ABE28_017885 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_017895 IPR001207 Transposase, mutator type ABE28_017900 IPR000182 GNAT domain ABE28_017900 IPR016181 Acyl-CoA N-acyltransferase ABE28_017905 IPR007159 SpoVT-AbrB domain ABE28_017905 IPR037914 SpoVT-AbrB domain superfamily ABE28_017905 IPR040678 AbrB, C-terminal ABE28_017910 IPR032713 Putative multidrug resistance efflux transporter ABE28_017915 IPR000390 Small multidrug resistance protein family ABE28_017920 IPR000390 Small multidrug resistance protein family ABE28_017930 IPR000330 SNF2-related, N-terminal domain ABE28_017930 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017930 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_017930 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_017930 IPR007527 Zinc finger, SWIM-type ABE28_017930 IPR001650 Helicase, C-terminal ABE28_017940 IPR004761 Spore germination GerAB ABE28_017945 IPR038501 Spore germination GerAC superfamily ABE28_017945 IPR008844 Spore germination GerAC ABE28_017950 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_017955 IPR032816 SNARE associated Golgi protein ABE28_017960 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_017960 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_017965 IPR001128 Cytochrome P450 ABE28_017965 IPR002397 Cytochrome P450, B-class ABE28_017965 IPR017972 Cytochrome P450, conserved site ABE28_017965 IPR036396 Cytochrome P450 superfamily ABE28_017980 IPR033524 Leu/Phe/Val dehydrogenases active site ABE28_017980 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ABE28_017980 IPR014362 Glutamate dehydrogenase ABE28_017980 IPR036291 NAD(P)-binding domain superfamily ABE28_017980 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ABE28_017980 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ABE28_017980 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ABE28_017985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_017985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_017985 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017985 IPR010164 Ornithine aminotransferase ABE28_017985 IPR034757 Ornithine aminotransferase, bacterial type ABE28_017985 IPR005814 Aminotransferase class-III ABE28_017990 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_017990 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_017990 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_017990 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_017990 IPR015590 Aldehyde dehydrogenase domain ABE28_017990 IPR005932 1-pyrroline-5-carboxylate dehydrogenase ABE28_017990 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_018000 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_018000 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018000 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_018000 IPR009057 Homeobox-like domain superfamily ABE28_018000 IPR003593 AAA+ ATPase domain ABE28_018000 IPR035965 PAS domain superfamily ABE28_018000 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018000 IPR002197 DNA binding HTH domain, Fis-type ABE28_018000 IPR000014 PAS domain ABE28_018000 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018005 IPR003680 Flavodoxin-like fold ABE28_018005 IPR029039 Flavoprotein-like superfamily ABE28_018005 IPR023048 NADH-azoreductase, FMN-dependent ABE28_018010 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_018010 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_018010 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II ABE28_018010 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018015 IPR032808 DoxX family ABE28_018025 IPR002528 Multi antimicrobial extrusion protein ABE28_018030 IPR017871 ABC transporter, conserved site ABE28_018030 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018030 IPR003439 ABC transporter-like ABE28_018030 IPR003593 AAA+ ATPase domain ABE28_018030 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_018035 IPR003593 AAA+ ATPase domain ABE28_018035 IPR003439 ABC transporter-like ABE28_018035 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018035 IPR017871 ABC transporter, conserved site ABE28_018040 IPR035906 MetI-like superfamily ABE28_018040 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_018040 IPR014157 Nickel ABC transporter, permease subunit NikC ABE28_018045 IPR035906 MetI-like superfamily ABE28_018045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_018060 IPR017871 ABC transporter, conserved site ABE28_018060 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_018060 IPR003593 AAA+ ATPase domain ABE28_018060 IPR003439 ABC transporter-like ABE28_018060 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018075 IPR041603 YvdT, C-terminal ABE28_018075 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_018075 IPR001647 DNA-binding HTH domain, TetR-type ABE28_018075 IPR009057 Homeobox-like domain superfamily ABE28_018080 IPR013118 Mannitol dehydrogenase, C-terminal ABE28_018080 IPR013131 Mannitol dehydrogenase, N-terminal ABE28_018080 IPR036291 NAD(P)-binding domain superfamily ABE28_018080 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_018080 IPR023028 Mannitol-1-phosphate 5-dehydrogenase ABE28_018080 IPR000669 Mannitol dehydrogenase ABE28_018080 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_018085 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_018085 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_018085 IPR036095 PTS system IIB component-like superfamily ABE28_018085 IPR002178 PTS EIIA type-2 domain ABE28_018085 IPR036634 PRD domain superfamily ABE28_018085 IPR011608 PRD domain ABE28_018085 IPR007737 Mga helix-turn-helix domain ABE28_018085 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018085 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018085 IPR013196 Helix-turn-helix, type 11 ABE28_018085 IPR016152 Phosphotransferase/anion transporter ABE28_018090 IPR002178 PTS EIIA type-2 domain ABE28_018090 IPR016152 Phosphotransferase/anion transporter ABE28_018090 IPR036095 PTS system IIB component-like superfamily ABE28_018090 IPR013011 Phosphotransferase system, EIIB component, type 2 ABE28_018090 IPR003501 Phosphotransferase system, EIIB component, type 2/3 ABE28_018090 IPR029503 Phosphotransferase system EIIB component, mannitol-specific ABE28_018090 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC ABE28_018090 IPR013014 Phosphotransferase system, EIIC component, type 2 ABE28_018090 IPR003352 Phosphotransferase system, EIIC ABE28_018095 IPR014738 Citrate transporter ABE28_018095 IPR004680 Citrate transporter-like domain ABE28_018100 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 ABE28_018100 IPR001714 Peptidase M24, methionine aminopeptidase ABE28_018100 IPR000994 Peptidase M24 ABE28_018100 IPR036005 Creatinase/aminopeptidase-like ABE28_018105 IPR024187 Signal transduction response regulator, citrate/malate metabolism ABE28_018105 IPR028141 Transcriptional regulator ABE28_018105 IPR011006 CheY-like superfamily ABE28_018105 IPR013196 Helix-turn-helix, type 11 ABE28_018105 IPR001789 Signal transduction response regulator, receiver domain ABE28_018110 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB ABE28_018110 IPR039506 SpoOB, alpha-helical domain ABE28_018110 IPR035965 PAS domain superfamily ABE28_018110 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018110 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018110 IPR013767 PAS fold ABE28_018110 IPR029151 Periplasmic sensor-like domain superfamily ABE28_018110 IPR033463 Single cache domain 3 ABE28_018110 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_018110 IPR000014 PAS domain ABE28_018110 IPR005467 Histidine kinase domain ABE28_018115 IPR003265 HhH-GPD domain ABE28_018115 IPR000035 Alkylbase DNA glycosidase, conserved site ABE28_018115 IPR012904 8-oxoguanine DNA glycosylase, N-terminal ABE28_018115 IPR011257 DNA glycosylase ABE28_018120 IPR004026 Ada DNA repair, metal-binding ABE28_018120 IPR035451 Ada-like domain superfamily ABE28_018120 IPR018060 DNA binding HTH domain, AraC-type ABE28_018120 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA ABE28_018120 IPR009057 Homeobox-like domain superfamily ABE28_018120 IPR018062 HTH domain AraC-type, conserved site ABE28_018125 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018125 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ABE28_018125 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_018125 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ABE28_018125 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ABE28_018125 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ABE28_018130 IPR021224 Protein of unknown function DUF2690 ABE28_018135 IPR021224 Protein of unknown function DUF2690 ABE28_018145 IPR005627 Copper homeostasis protein CutC ABE28_018145 IPR036822 Copper homeostasis (CutC) domain superfamily ABE28_018145 IPR023648 Copper homeostasis CutC domain ABE28_018150 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_018150 IPR000944 Transcription regulator Rrf2-type ABE28_018150 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018150 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018155 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_018155 IPR023753 FAD/NAD(P)-binding domain ABE28_018160 IPR000551 MerR-type HTH domain ABE28_018160 IPR009061 Putative DNA-binding domain superfamily ABE28_018160 IPR012925 TipAS antibiotic-recognition domain ABE28_018160 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain ABE28_018165 IPR001646 Pentapeptide repeat ABE28_018175 IPR003679 Aminoglycoside N(3)-acetyltransferase ABE28_018175 IPR028345 Aminoglycoside 3-N-acetyltransferase-like ABE28_018185 IPR036458 Sodium:dicarboxylate symporter superfamily ABE28_018185 IPR001991 Sodium:dicarboxylate symporter ABE28_018205 IPR004841 Amino acid permease/ SLC12A domain ABE28_018215 IPR003834 Cytochrome C biogenesis protein, transmembrane domain ABE28_018230 IPR000792 Transcription regulator LuxR, C-terminal ABE28_018230 IPR001789 Signal transduction response regulator, receiver domain ABE28_018230 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_018230 IPR011006 CheY-like superfamily ABE28_018235 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018235 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ABE28_018235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018235 IPR005467 Histidine kinase domain ABE28_018235 IPR017202 Sensor histidine kinase LiaS/VraS ABE28_018235 IPR003660 HAMP domain ABE28_018245 IPR007157 PspA/IM30 ABE28_018255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_018255 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_018255 IPR001647 DNA-binding HTH domain, TetR-type ABE28_018255 IPR009057 Homeobox-like domain superfamily ABE28_018260 IPR010111 Kynureninase ABE28_018260 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018260 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_018260 IPR000192 Aminotransferase class V domain ABE28_018260 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_018265 IPR004840 Amino acid permease, conserved site ABE28_018265 IPR004841 Amino acid permease/ SLC12A domain ABE28_018270 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like ABE28_018270 IPR004981 Tryptophan 2,3-dioxygenase ABE28_018270 IPR017485 Tryptophan 2,3-dioxygenase, bacterial ABE28_018275 IPR007325 Kynurenine formamidase/cyclase-like ABE28_018275 IPR037175 Kynurenine formamidase superfamily ABE28_018275 IPR017484 Kynurenine formamidase, bacteria ABE28_018285 IPR001123 Amino acid exporter protein, LeuE-type ABE28_018285 IPR004778 Homoserine/Threonine efflux protein ABE28_018290 IPR001018 Beta-lactamase, class-B, conserved site ABE28_018290 IPR001279 Metallo-beta-lactamase ABE28_018290 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_018295 IPR025202 Phospholipase D-like domain ABE28_018295 IPR001736 Phospholipase D/Transphosphatidylase ABE28_018310 IPR008254 Flavodoxin/nitric oxide synthase ABE28_018310 IPR010087 Flavodoxin, short chain ABE28_018310 IPR029039 Flavoprotein-like superfamily ABE28_018310 IPR001094 Flavodoxin-like ABE28_018315 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_018315 IPR001036 Acriflavin resistance protein ABE28_018330 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_018330 IPR029052 Metallo-dependent phosphatase-like ABE28_018330 IPR041780 PrpE-like, metallophosphatase domain ABE28_018330 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase ABE28_018330 IPR023937 Bis(5'-nucleosyl)-tetraphosphatase PrpE ABE28_018340 IPR003593 AAA+ ATPase domain ABE28_018340 IPR003838 ABC transporter permease protein domain ABE28_018340 IPR017911 ABC transporter, macrolide export, ATP-binding domain ABE28_018340 IPR003439 ABC transporter-like ABE28_018340 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018340 IPR017871 ABC transporter, conserved site ABE28_018340 IPR025857 MacB-like periplasmic core domain ABE28_018365 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_018365 IPR036291 NAD(P)-binding domain superfamily ABE28_018375 IPR027365 GNAT acetyltransferase YdfB-like ABE28_018375 IPR000182 GNAT domain ABE28_018375 IPR016181 Acyl-CoA N-acyltransferase ABE28_018380 IPR000847 Transcription regulator HTH, LysR ABE28_018380 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018380 IPR005119 LysR, substrate-binding ABE28_018380 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018385 IPR023908 xxxLxxG heptad repeat ABE28_018385 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_018385 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_018390 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_018390 IPR005163 3-alpha domain ABE28_018390 IPR005302 Molybdenum cofactor sulfurase, C-terminal ABE28_018395 IPR004638 Drug resistance transporter EmrB-like ABE28_018395 IPR011701 Major facilitator superfamily ABE28_018395 IPR020846 Major facilitator superfamily domain ABE28_018395 IPR036259 MFS transporter superfamily ABE28_018400 IPR009057 Homeobox-like domain superfamily ABE28_018400 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_018400 IPR001647 DNA-binding HTH domain, TetR-type ABE28_018405 IPR004841 Amino acid permease/ SLC12A domain ABE28_018410 IPR011701 Major facilitator superfamily ABE28_018410 IPR020846 Major facilitator superfamily domain ABE28_018410 IPR036259 MFS transporter superfamily ABE28_018410 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG ABE28_018415 IPR001123 Amino acid exporter protein, LeuE-type ABE28_018420 IPR036621 Anticodon-binding domain superfamily ABE28_018420 IPR004154 Anticodon-binding ABE28_018420 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_018420 IPR012947 Threonyl/alanyl tRNA synthetase, SAD ABE28_018420 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) ABE28_018420 IPR012675 Beta-grasp domain superfamily ABE28_018420 IPR004095 TGS ABE28_018420 IPR002320 Threonine-tRNA ligase, class IIa ABE28_018420 IPR012676 TGS-like ABE28_018420 IPR033728 Threonine-tRNA ligase catalytic core domain ABE28_018420 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily ABE28_018440 IPR011650 Peptidase M20, dimerisation domain ABE28_018440 IPR002933 Peptidase M20 ABE28_018440 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase ABE28_018440 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_018445 IPR004165 Coenzyme A transferase family I ABE28_018445 IPR012791 3-oxoacid CoA-transferase, subunit B ABE28_018445 IPR037171 NagB/RpiA transferase-like ABE28_018450 IPR012792 3-oxoacid CoA-transferase, subunit A ABE28_018450 IPR004163 Coenzyme A transferase binding site ABE28_018450 IPR037171 NagB/RpiA transferase-like ABE28_018450 IPR004165 Coenzyme A transferase family I ABE28_018455 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_018455 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_018455 IPR005814 Aminotransferase class-III ABE28_018455 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018470 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_018470 IPR022459 Lysine-2,3-aminomutase ABE28_018470 IPR025895 Lysine-2,3-aminomutase, C-terminal domain ABE28_018470 IPR013785 Aldolase-type TIM barrel ABE28_018475 IPR016181 Acyl-CoA N-acyltransferase ABE28_018475 IPR000182 GNAT domain ABE28_018480 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_018480 IPR003593 AAA+ ATPase domain ABE28_018480 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_018480 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018480 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018480 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018480 IPR002197 DNA binding HTH domain, Fis-type ABE28_018480 IPR035965 PAS domain superfamily ABE28_018480 IPR000014 PAS domain ABE28_018480 IPR009057 Homeobox-like domain superfamily ABE28_018490 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_018490 IPR039561 Peptidase M15C ABE28_018495 IPR037171 NagB/RpiA transferase-like ABE28_018495 IPR004165 Coenzyme A transferase family I ABE28_018495 IPR004164 Coenzyme A transferase active site ABE28_018495 IPR012791 3-oxoacid CoA-transferase, subunit B ABE28_018500 IPR004165 Coenzyme A transferase family I ABE28_018500 IPR037171 NagB/RpiA transferase-like ABE28_018500 IPR012792 3-oxoacid CoA-transferase, subunit A ABE28_018500 IPR004163 Coenzyme A transferase binding site ABE28_018505 IPR003474 Gluconate transporter ABE28_018510 IPR009057 Homeobox-like domain superfamily ABE28_018510 IPR002197 DNA binding HTH domain, Fis-type ABE28_018510 IPR036291 NAD(P)-binding domain superfamily ABE28_018510 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018510 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018510 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018510 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_018510 IPR002078 RNA polymerase sigma factor 54 interaction domain ABE28_018510 IPR035965 PAS domain superfamily ABE28_018510 IPR013767 PAS fold ABE28_018510 IPR003593 AAA+ ATPase domain ABE28_018510 IPR000014 PAS domain ABE28_018520 IPR026578 L-carnitine dehydrogenase ABE28_018520 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_018520 IPR036291 NAD(P)-binding domain superfamily ABE28_018520 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_018520 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_018520 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_018525 IPR011294 3-hydroxybutyrate dehydrogenase ABE28_018525 IPR036291 NAD(P)-binding domain superfamily ABE28_018525 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_018525 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018530 IPR029058 Alpha/Beta hydrolase fold ABE28_018530 IPR000073 Alpha/beta hydrolase fold-1 ABE28_018550 IPR007263 Protein of unknown function DUF393 ABE28_018580 IPR036670 SecA, preprotein cross-linking domain superfamily ABE28_018580 IPR000185 Protein translocase subunit SecA ABE28_018580 IPR004027 SEC-C motif ABE28_018580 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018580 IPR020937 SecA conserved site ABE28_018580 IPR011116 SecA Wing/Scaffold ABE28_018580 IPR036266 SecA, Wing/Scaffold superfamily ABE28_018580 IPR014018 SecA motor DEAD ABE28_018580 IPR011115 SecA DEAD-like, N-terminal ABE28_018580 IPR011130 SecA, preprotein cross-linking domain ABE28_018590 IPR003474 Gluconate transporter ABE28_018595 IPR036291 NAD(P)-binding domain superfamily ABE28_018595 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_018595 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 IPR011294 3-hydroxybutyrate dehydrogenase ABE28_018600 IPR003474 Gluconate transporter ABE28_018605 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018605 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018605 IPR005119 LysR, substrate-binding ABE28_018605 IPR000847 Transcription regulator HTH, LysR ABE28_018615 IPR035994 Nucleoside phosphorylase superfamily ABE28_018615 IPR000845 Nucleoside phosphorylase domain ABE28_018615 IPR010049 MTA/SAH nucleosidase ABE28_018635 IPR005490 L,D-transpeptidase catalytic domain ABE28_018635 IPR018392 LysM domain ABE28_018635 IPR036779 LysM domain superfamily ABE28_018635 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_018660 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_018660 IPR020471 Aldo/keto reductase ABE28_018660 IPR023210 NADP-dependent oxidoreductase domain ABE28_018665 IPR004090 Chemotaxis methyl-accepting receptor ABE28_018665 IPR007891 CHASE3 ABE28_018665 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_018665 IPR003660 HAMP domain ABE28_018670 IPR004839 Aminotransferase, class I/classII ABE28_018670 IPR000524 Transcription regulator HTH, GntR ABE28_018670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_018670 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018670 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018670 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018675 IPR000620 EamA domain ABE28_018690 IPR020084 NUDIX hydrolase, conserved site ABE28_018690 IPR000086 NUDIX hydrolase domain ABE28_018690 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_018705 IPR026834 LHH ABE28_018705 IPR006829 LXG domain ABE28_018710 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_018710 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_018715 IPR011701 Major facilitator superfamily ABE28_018715 IPR005829 Sugar transporter, conserved site ABE28_018715 IPR004736 MFS transporter, metabolite:H symporter ABE28_018715 IPR020846 Major facilitator superfamily domain ABE28_018715 IPR036259 MFS transporter superfamily ABE28_018715 IPR005828 Major facilitator, sugar transporter-like ABE28_018720 IPR023401 Ornithine cyclodeaminase, N-terminal ABE28_018720 IPR003462 Ornithine cyclodeaminase/mu-crystallin ABE28_018720 IPR036291 NAD(P)-binding domain superfamily ABE28_018730 IPR035900 Colicin E immunity protein superfamily ABE28_018745 IPR026834 LHH ABE28_018745 IPR006829 LXG domain ABE28_018750 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_018750 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_018755 IPR036259 MFS transporter superfamily ABE28_018755 IPR005829 Sugar transporter, conserved site ABE28_018755 IPR005828 Major facilitator, sugar transporter-like ABE28_018755 IPR004736 MFS transporter, metabolite:H symporter ABE28_018755 IPR011701 Major facilitator superfamily ABE28_018755 IPR020846 Major facilitator superfamily domain ABE28_018760 IPR003462 Ornithine cyclodeaminase/mu-crystallin ABE28_018760 IPR036291 NAD(P)-binding domain superfamily ABE28_018760 IPR023401 Ornithine cyclodeaminase, N-terminal ABE28_018770 IPR035900 Colicin E immunity protein superfamily ABE28_018785 IPR026834 LHH ABE28_018785 IPR006829 LXG domain ABE28_018790 IPR020846 Major facilitator superfamily domain ABE28_018790 IPR011701 Major facilitator superfamily ABE28_018790 IPR036259 MFS transporter superfamily ABE28_018800 IPR039421 Type I protein exporter ABE28_018800 IPR036640 ABC transporter type 1, transmembrane domain superfamily ABE28_018800 IPR011527 ABC transporter type 1, transmembrane domain ABE28_018800 IPR003439 ABC transporter-like ABE28_018800 IPR003593 AAA+ ATPase domain ABE28_018800 IPR017871 ABC transporter, conserved site ABE28_018800 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018810 IPR017871 ABC transporter, conserved site ABE28_018810 IPR003439 ABC transporter-like ABE28_018810 IPR003593 AAA+ ATPase domain ABE28_018810 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018815 IPR037294 ABC transporter, BtuC-like ABE28_018815 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_018820 IPR004872 Lipoprotein NlpA family ABE28_018825 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_018825 IPR035906 MetI-like superfamily ABE28_018830 IPR018449 NIL domain ABE28_018830 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ABE28_018830 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ABE28_018830 IPR017871 ABC transporter, conserved site ABE28_018830 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018830 IPR003439 ABC transporter-like ABE28_018830 IPR003593 AAA+ ATPase domain ABE28_018835 IPR000801 Putative esterase ABE28_018835 IPR029058 Alpha/Beta hydrolase fold ABE28_018845 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018845 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_018845 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_018845 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase ABE28_018845 IPR004839 Aminotransferase, class I/classII ABE28_018845 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ABE28_018855 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_018855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_018855 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018855 IPR005467 Histidine kinase domain ABE28_018855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_018855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018860 IPR041102 UvrA, interaction domain ABE28_018860 IPR041552 UvrA DNA-binding domain ABE28_018860 IPR004602 UvrABC system subunit A ABE28_018860 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018860 IPR003439 ABC transporter-like ABE28_018870 IPR000212 DNA helicase, UvrD/REP type ABE28_018870 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018870 IPR014016 UvrD-like helicase, ATP-binding domain ABE28_018870 IPR027785 UvrD-like helicase C-terminal domain ABE28_018875 IPR008613 Excalibur calcium-binding domain ABE28_018900 IPR032475 Protealysin, N-terminal propeptide ABE28_018900 IPR013856 Peptidase M4 domain ABE28_018900 IPR023612 Peptidase M4 ABE28_018900 IPR027268 Peptidase M4/M1, CTD superfamily ABE28_018900 IPR001570 Peptidase M4, C-terminal ABE28_018905 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain ABE28_018905 IPR029009 Allosteric substrate binding domain superfamily ABE28_018905 IPR036291 NAD(P)-binding domain superfamily ABE28_018905 IPR002912 ACT domain ABE28_018905 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABE28_018905 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_018905 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_018905 IPR006236 D-3-phosphoglycerate dehydrogenase ABE28_018920 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ABE28_018920 IPR013974 SAF domain ABE28_018930 IPR007392 D-galactarate/Altronate dehydratase, C-terminal ABE28_018930 IPR013974 SAF domain ABE28_018935 IPR004684 2-keto-3-deoxygluconate permease ABE28_018945 IPR020625 Schiff base-forming aldolase, active site ABE28_018945 IPR020624 Schiff base-forming aldolase, conserved site ABE28_018945 IPR002220 DapA-like ABE28_018945 IPR013785 Aldolase-type TIM barrel ABE28_018950 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_018950 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_018950 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_018950 IPR015590 Aldehyde dehydrogenase domain ABE28_018950 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_018950 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_018955 IPR005471 Transcription regulator IclR, N-terminal ABE28_018955 IPR029016 GAF-like domain superfamily ABE28_018955 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018955 IPR014757 Transcription regulator IclR, C-terminal ABE28_018955 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018970 IPR008979 Galactose-binding-like domain superfamily ABE28_018970 IPR031325 RHS repeat ABE28_018970 IPR022385 Rhs repeat-associated core ABE28_018970 IPR006530 YD repeat ABE28_018985 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_018985 IPR011055 Duplicated hybrid motif ABE28_019000 IPR012851 Spore coat protein CotF-like ABE28_019015 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019015 IPR002137 Beta-lactamase, class-D active site ABE28_019015 IPR001460 Penicillin-binding protein, transpeptidase ABE28_019040 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 IPR036291 NAD(P)-binding domain superfamily ABE28_019040 IPR005979 Light-dependent protochlorophyllide reductase ABE28_019055 IPR003562 Mutator MutX protein ABE28_019055 IPR020476 NUDIX hydrolase ABE28_019055 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_019055 IPR020084 NUDIX hydrolase, conserved site ABE28_019055 IPR000086 NUDIX hydrolase domain ABE28_019065 IPR001433 Oxidoreductase FAD/NAD(P)-binding ABE28_019065 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_019065 IPR029039 Flavoprotein-like superfamily ABE28_019065 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase ABE28_019065 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily ABE28_019065 IPR036396 Cytochrome P450 superfamily ABE28_019065 IPR017927 FAD-binding domain, ferredoxin reductase-type ABE28_019065 IPR017972 Cytochrome P450, conserved site ABE28_019065 IPR001128 Cytochrome P450 ABE28_019065 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding ABE28_019065 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase ABE28_019065 IPR001094 Flavodoxin-like ABE28_019065 IPR017938 Riboflavin synthase-like beta-barrel ABE28_019065 IPR008254 Flavodoxin/nitric oxide synthase ABE28_019070 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_019070 IPR001647 DNA-binding HTH domain, TetR-type ABE28_019070 IPR009057 Homeobox-like domain superfamily ABE28_019070 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_019070 IPR032551 HTH-type transcriptional repressor, C-terminal ABE28_019075 IPR031100 LOG family ABE28_019075 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ABE28_019085 IPR033879 Undecaprenyl-diphosphatase ABE28_019085 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_019085 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_019090 IPR011701 Major facilitator superfamily ABE28_019090 IPR020846 Major facilitator superfamily domain ABE28_019090 IPR036259 MFS transporter superfamily ABE28_019105 IPR036291 NAD(P)-binding domain superfamily ABE28_019105 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019110 IPR013785 Aldolase-type TIM barrel ABE28_019110 IPR006218 DAHP synthetase I/KDSA ABE28_019110 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 ABE28_019110 IPR002701 Chorismate mutase II, prokaryotic-type ABE28_019110 IPR036979 Chorismate mutase domain superfamily ABE28_019110 IPR010954 Chorismate mutase, Firmicutes/Deinococcus ABE28_019120 IPR014710 RmlC-like jelly roll fold ABE28_019120 IPR011051 RmlC-like cupin domain superfamily ABE28_019120 IPR013096 Cupin 2, conserved barrel ABE28_019125 IPR036291 NAD(P)-binding domain superfamily ABE28_019125 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_019125 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019130 IPR013815 ATP-grasp fold, subdomain 1 ABE28_019130 IPR011761 ATP-grasp fold ABE28_019135 IPR011701 Major facilitator superfamily ABE28_019135 IPR022324 Bacilysin exporter BacE, putative ABE28_019135 IPR036259 MFS transporter superfamily ABE28_019140 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_019140 IPR004839 Aminotransferase, class I/classII ABE28_019140 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_019140 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_019140 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ABE28_019155 IPR011650 Peptidase M20, dimerisation domain ABE28_019155 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_019155 IPR017150 Peptidase M20, glutamate carboxypeptidase ABE28_019155 IPR002933 Peptidase M20 ABE28_019155 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ABE28_019160 IPR004872 Lipoprotein NlpA family ABE28_019165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_019165 IPR035906 MetI-like superfamily ABE28_019170 IPR026253 Methionine import ATP-binding protein MetN ABE28_019170 IPR003439 ABC transporter-like ABE28_019170 IPR017871 ABC transporter, conserved site ABE28_019170 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ABE28_019170 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ABE28_019170 IPR018449 NIL domain ABE28_019170 IPR003593 AAA+ ATPase domain ABE28_019170 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019180 IPR006680 Amidohydrolase-related ABE28_019180 IPR023512 Deaminase MtaD/DadD ABE28_019180 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019180 IPR032466 Metal-dependent hydrolase ABE28_019185 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site ABE28_019185 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_019185 IPR011032 GroES-like superfamily ABE28_019185 IPR036291 NAD(P)-binding domain superfamily ABE28_019185 IPR020843 Polyketide synthase, enoylreductase domain ABE28_019185 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_019195 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit ABE28_019195 IPR036928 Amidase signature (AS) superfamily ABE28_019195 IPR020556 Amidase, conserved site ABE28_019195 IPR000120 Amidase ABE28_019195 IPR023631 Amidase signature domain ABE28_019225 IPR040442 Pyruvate kinase-like domain superfamily ABE28_019225 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_019225 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase ABE28_019225 IPR005000 HpcH/HpaI aldolase/citrate lyase domain ABE28_019230 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase ABE28_019230 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019230 IPR029058 Alpha/Beta hydrolase fold ABE28_019240 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_019240 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_019240 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_019240 IPR015590 Aldehyde dehydrogenase domain ABE28_019240 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_019245 IPR039697 Iron-type alcohol dehydrogenase-like ABE28_019245 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ABE28_019245 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ABE28_019250 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_019250 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 IPR036291 NAD(P)-binding domain superfamily ABE28_019250 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase ABE28_019255 IPR000843 LacI-type HTH domain ABE28_019255 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_019255 IPR028082 Periplasmic binding protein-like I ABE28_019260 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_019260 IPR000150 Cof family ABE28_019260 IPR023214 HAD superfamily ABE28_019260 IPR036412 HAD-like superfamily ABE28_019265 IPR004703 Phosphotransferase system, sugar-specific permease component ABE28_019280 IPR016152 Phosphotransferase/anion transporter ABE28_019280 IPR002178 PTS EIIA type-2 domain ABE28_019285 IPR020846 Major facilitator superfamily domain ABE28_019285 IPR011701 Major facilitator superfamily ABE28_019285 IPR036259 MFS transporter superfamily ABE28_019285 IPR004638 Drug resistance transporter EmrB-like ABE28_019290 IPR011437 Domain of unknown function DUF1540 ABE28_019295 IPR025299 CstA, C-terminal domain ABE28_019295 IPR003706 CstA, N-terminal domain ABE28_019300 IPR007492 LytTR DNA-binding domain ABE28_019300 IPR001789 Signal transduction response regulator, receiver domain ABE28_019300 IPR011006 CheY-like superfamily ABE28_019305 IPR010559 Signal transduction histidine kinase, internal region ABE28_019305 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019305 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ABE28_019305 IPR005467 Histidine kinase domain ABE28_019305 IPR003018 GAF domain ABE28_019305 IPR029016 GAF-like domain superfamily ABE28_019305 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_019310 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_019310 IPR002625 Smr domain ABE28_019310 IPR036063 Smr domain superfamily ABE28_019310 IPR000432 DNA mismatch repair protein MutS, C-terminal ABE28_019310 IPR005747 Endonuclease MutS2 ABE28_019310 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019310 IPR007696 DNA mismatch repair protein MutS, core ABE28_019320 IPR011701 Major facilitator superfamily ABE28_019320 IPR020846 Major facilitator superfamily domain ABE28_019320 IPR036259 MFS transporter superfamily ABE28_019320 IPR000849 Sugar phosphate transporter ABE28_019325 IPR002933 Peptidase M20 ABE28_019325 IPR017439 Amidohydrolase ABE28_019325 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_019325 IPR017145 Aminobenzoyl-glutamate utilization protein B ABE28_019330 IPR006680 Amidohydrolase-related ABE28_019330 IPR026912 Adenine deaminase C-terminal domain ABE28_019330 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019330 IPR006679 Adenine deaminase ABE28_019330 IPR032466 Metal-dependent hydrolase ABE28_019335 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA ABE28_019335 IPR017871 ABC transporter, conserved site ABE28_019335 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_019335 IPR003439 ABC transporter-like ABE28_019335 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019335 IPR003593 AAA+ ATPase domain ABE28_019335 IPR013611 Transport-associated OB, type 2 ABE28_019340 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_019340 IPR035906 MetI-like superfamily ABE28_019345 IPR035906 MetI-like superfamily ABE28_019345 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_019350 IPR023186 Inosine/uridine-preferring nucleoside hydrolase ABE28_019350 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_019350 IPR036452 Ribonucleoside hydrolase-like ABE28_019350 IPR022977 Pyrimidine-specific ribonucleoside hydrolase RihB ABE28_019365 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_019365 IPR003352 Phosphotransferase system, EIIC ABE28_019365 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component ABE28_019365 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_019365 IPR011299 PTS system glucose-specific IIBC component ABE28_019365 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_019365 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_019365 IPR011055 Duplicated hybrid motif ABE28_019365 IPR036878 Glucose permease domain IIB ABE28_019370 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase ABE28_019370 IPR011060 Ribulose-phosphate binding barrel ABE28_019370 IPR013785 Aldolase-type TIM barrel ABE28_019375 IPR020557 Fumarate lyase, conserved site ABE28_019375 IPR022761 Fumarate lyase, N-terminal ABE28_019375 IPR004708 Aspartate ammonia-lyase ABE28_019375 IPR008948 L-Aspartase-like ABE28_019375 IPR018951 Fumarase C, C-terminal ABE28_019375 IPR024083 Fumarase/histidase, N-terminal ABE28_019375 IPR000362 Fumarate lyase family ABE28_019380 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019380 IPR001347 Sugar isomerase (SIS) ABE28_019380 IPR035472 RpiR-like, SIS domain ABE28_019380 IPR009057 Homeobox-like domain superfamily ABE28_019380 IPR000281 Helix-turn-helix protein RpiR ABE28_019385 IPR020051 SagB-type dehydrogenase domain ABE28_019385 IPR000415 Nitroreductase-like ABE28_019385 IPR029479 Nitroreductase ABE28_019405 IPR006043 Xanthine/uracil/vitamin C permease ABE28_019410 IPR013108 Amidohydrolase 3 ABE28_019410 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_019410 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019410 IPR032466 Metal-dependent hydrolase ABE28_019415 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_019415 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019415 IPR013108 Amidohydrolase 3 ABE28_019415 IPR032466 Metal-dependent hydrolase ABE28_019420 IPR013108 Amidohydrolase 3 ABE28_019420 IPR032466 Metal-dependent hydrolase ABE28_019420 IPR006311 Twin-arginine translocation pathway, signal sequence ABE28_019420 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019425 IPR039424 Solute-binding protein family 5 ABE28_019425 IPR000914 Solute-binding protein family 5 domain ABE28_019425 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_019430 IPR006680 Amidohydrolase-related ABE28_019430 IPR032466 Metal-dependent hydrolase ABE28_019430 IPR023512 Deaminase MtaD/DadD ABE28_019430 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019435 IPR023512 Deaminase MtaD/DadD ABE28_019435 IPR006680 Amidohydrolase-related ABE28_019435 IPR011059 Metal-dependent hydrolase, composite domain superfamily ABE28_019435 IPR032466 Metal-dependent hydrolase ABE28_019440 IPR000914 Solute-binding protein family 5 domain ABE28_019440 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_019440 IPR039424 Solute-binding protein family 5 ABE28_019450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_019450 IPR035906 MetI-like superfamily ABE28_019455 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019455 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_019455 IPR017871 ABC transporter, conserved site ABE28_019455 IPR003593 AAA+ ATPase domain ABE28_019455 IPR003439 ABC transporter-like ABE28_019460 IPR017871 ABC transporter, conserved site ABE28_019460 IPR003593 AAA+ ATPase domain ABE28_019460 IPR003439 ABC transporter-like ABE28_019460 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_019460 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019465 IPR005467 Histidine kinase domain ABE28_019465 IPR010559 Signal transduction histidine kinase, internal region ABE28_019465 IPR003018 GAF domain ABE28_019465 IPR029016 GAF-like domain superfamily ABE28_019465 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region ABE28_019465 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_019465 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019470 IPR018060 DNA binding HTH domain, AraC-type ABE28_019470 IPR009057 Homeobox-like domain superfamily ABE28_019470 IPR041522 CdaR, GGDEF-like domain ABE28_019480 IPR003846 Protein adenylyltransferase SelO ABE28_019500 IPR014225 Sporulation stage II, protein D firmicutes ABE28_019500 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_019500 IPR013486 Sporulation stage II protein D, amidase enhancer LytB ABE28_019505 IPR004761 Spore germination GerAB ABE28_019515 IPR029039 Flavoprotein-like superfamily ABE28_019515 IPR010089 Flavoprotein WrbA-like ABE28_019515 IPR008254 Flavodoxin/nitric oxide synthase ABE28_019515 IPR005025 NADPH-dependent FMN reductase-like ABE28_019525 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019525 IPR005119 LysR, substrate-binding ABE28_019525 IPR000847 Transcription regulator HTH, LysR ABE28_019525 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019565 IPR029058 Alpha/Beta hydrolase fold ABE28_019565 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019595 IPR039425 RNA polymerase sigma-70 like ABE28_019595 IPR014284 RNA polymerase sigma-70 like domain ABE28_019595 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_019595 IPR007627 RNA polymerase sigma-70 region 2 ABE28_019595 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_019595 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_019595 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019595 IPR013325 RNA polymerase sigma factor, region 2 ABE28_019595 IPR014286 RNA polymerase sigma-70 RpoE type ABE28_019620 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019620 IPR023650 Beta-lactamase, class-A active site ABE28_019620 IPR000871 Beta-lactamase, class-A ABE28_019625 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019625 IPR000847 Transcription regulator HTH, LysR ABE28_019625 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019625 IPR005119 LysR, substrate-binding ABE28_019635 IPR000620 EamA domain ABE28_019640 IPR000620 EamA domain ABE28_019645 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ABE28_019645 IPR010960 Flavocytochrome c ABE28_019645 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_019645 IPR036280 Multiheme cytochrome superfamily ABE28_019645 IPR012286 Tetrahaem cytochrome domain ABE28_019645 IPR011031 Multihaem cytochrome ABE28_019645 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily ABE28_019650 IPR005119 LysR, substrate-binding ABE28_019650 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019650 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019650 IPR000847 Transcription regulator HTH, LysR ABE28_019660 IPR014738 Citrate transporter ABE28_019660 IPR004680 Citrate transporter-like domain ABE28_019665 IPR011294 3-hydroxybutyrate dehydrogenase ABE28_019665 IPR036291 NAD(P)-binding domain superfamily ABE28_019665 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_019665 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019675 IPR013096 Cupin 2, conserved barrel ABE28_019675 IPR014710 RmlC-like jelly roll fold ABE28_019675 IPR011051 RmlC-like cupin domain superfamily ABE28_019675 IPR019780 Germin, manganese binding site ABE28_019680 IPR001173 Glycosyltransferase 2-like ABE28_019680 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_019680 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 ABE28_019705 IPR001466 Beta-lactamase-related ABE28_019705 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019710 IPR042047 Cell wall hydrolase SleB, domain 1 ABE28_019710 IPR011105 Cell wall hydrolase, SleB ABE28_019715 IPR014099 Spore coat protein GerQ ABE28_019720 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes ABE28_019720 IPR014250 Quinol oxidase subunit IV ABE28_019725 IPR035973 Cytochrome c oxidase subunit III-like superfamily ABE28_019725 IPR033946 Ubiquinol oxidase subunit III domain ABE28_019725 IPR000298 Cytochrome c oxidase subunit III-like ABE28_019725 IPR024791 Cytochrome c oxidase subunit III ABE28_019725 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle ABE28_019725 IPR014246 Quinol oxidase subunit III ABE28_019730 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site ABE28_019730 IPR036927 Cytochrome c oxidase-like, subunit I superfamily ABE28_019730 IPR023616 Cytochrome c oxidase-like, subunit I domain ABE28_019730 IPR000883 Cytochrome c oxidase subunit I ABE28_019730 IPR014233 Quinol oxidase subunit I ABE28_019735 IPR006333 Cytochrome o ubiquinol oxidase subunit II ABE28_019735 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily ABE28_019735 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain ABE28_019735 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain ABE28_019735 IPR006332 Quinol oxidase subunit II ABE28_019735 IPR008972 Cupredoxin ABE28_019735 IPR002429 Cytochrome c oxidase subunit II-like C-terminal ABE28_019795 IPR037401 SnoaL-like domain ABE28_019795 IPR032710 NTF2-like domain superfamily ABE28_019850 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site ABE28_019850 IPR020843 Polyketide synthase, enoylreductase domain ABE28_019850 IPR036291 NAD(P)-binding domain superfamily ABE28_019850 IPR011032 GroES-like superfamily ABE28_019850 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_019850 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_019860 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_019865 IPR004761 Spore germination GerAB ABE28_019870 IPR016181 Acyl-CoA N-acyltransferase ABE28_019870 IPR000182 GNAT domain ABE28_019880 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_019880 IPR011991 ArsR-like helix-turn-helix domain ABE28_019880 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019880 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019880 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABE28_019880 IPR019888 Transcription regulator AsnC-type ABE28_019880 IPR011008 Dimeric alpha-beta barrel ABE28_019880 IPR000485 AsnC-type HTH domain ABE28_019885 IPR029062 Class I glutamine amidotransferase-like ABE28_019885 IPR002818 DJ-1/PfpI ABE28_019885 IPR006286 Deglycase PfpI ABE28_019890 IPR012440 Protein of unknown function DUF1641 ABE28_019895 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_019895 IPR023753 FAD/NAD(P)-binding domain ABE28_019900 IPR017552 3-hexulose-6-phosphate isomerase ABE28_019900 IPR001347 Sugar isomerase (SIS) ABE28_019905 IPR005148 Arginyl tRNA synthetase N-terminal domain ABE28_019905 IPR001278 Arginine-tRNA ligase ABE28_019905 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_019905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_019905 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily ABE28_019905 IPR035684 Arginyl-tRNA synthetase, catalytic core domain ABE28_019905 IPR008909 DALR anticodon binding ABE28_019910 IPR001789 Signal transduction response regulator, receiver domain ABE28_019910 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_019910 IPR000792 Transcription regulator LuxR, C-terminal ABE28_019910 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019910 IPR011006 CheY-like superfamily ABE28_019915 IPR005804 Fatty acid desaturase domain ABE28_019920 IPR041704 CFLE, GH18 catalytic domain ABE28_019920 IPR017853 Glycoside hydrolase superfamily ABE28_019920 IPR029070 Chitinase insertion domain superfamily ABE28_019920 IPR011583 Chitinase II ABE28_019920 IPR001223 Glycoside hydrolase family 18, catalytic domain ABE28_019925 IPR000620 EamA domain ABE28_019930 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon ABE28_019945 IPR009057 Homeobox-like domain superfamily ABE28_019945 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_019945 IPR001647 DNA-binding HTH domain, TetR-type ABE28_019970 IPR041029 N-acetylglucosamine binding protein A domain 2 ABE28_019970 IPR020879 N-acetylglucosamine-binding protein A ABE28_019970 IPR014756 Immunoglobulin E-set ABE28_019970 IPR004302 Cellulose/chitin-binding protein, N-terminal ABE28_019975 IPR032688 ABC-2 family transporter protein ABE28_019980 IPR003439 ABC transporter-like ABE28_019980 IPR003593 AAA+ ATPase domain ABE28_019980 IPR017871 ABC transporter, conserved site ABE28_019980 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019985 IPR036412 HAD-like superfamily ABE28_019985 IPR006439 HAD hydrolase, subfamily IA ABE28_019985 IPR023214 HAD superfamily ABE28_019985 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_019985 IPR041492 Haloacid dehalogenase-like hydrolase ABE28_019990 IPR010611 3D domain ABE28_019990 IPR036908 RlpA-like domain superfamily ABE28_019990 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ABE28_019990 IPR011098 G5 domain ABE28_020000 IPR011009 Protein kinase-like domain superfamily ABE28_020000 IPR002575 Aminoglycoside phosphotransferase ABE28_020005 IPR019723 Uncharacterised protein, YfmQ ABE28_020020 IPR014718 Glycoside hydrolase-type carbohydrate-binding ABE28_020020 IPR011013 Galactose mutarotase-like domain superfamily ABE28_020020 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase ABE28_020020 IPR015443 Aldose 1-epimerase ABE28_020025 IPR000766 Galactose-1-phosphate uridyl transferase, class II ABE28_020025 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal ABE28_020025 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal ABE28_020025 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site ABE28_020030 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_020030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_020030 IPR006204 GHMP kinase N-terminal domain ABE28_020030 IPR006206 Mevalonate/galactokinase ABE28_020030 IPR006203 GHMP kinase, ATP-binding, conserved site ABE28_020030 IPR000705 Galactokinase ABE28_020030 IPR022963 Galactokinase, bacterial ABE28_020030 IPR019741 Galactokinase, conserved site ABE28_020030 IPR019539 Galactokinase galactose-binding domain ABE28_020030 IPR013750 GHMP kinase, C-terminal domain ABE28_020030 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_020035 IPR004199 Beta galactosidase small chain/ domain 5 ABE28_020035 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ABE28_020035 IPR011013 Galactose mutarotase-like domain superfamily ABE28_020035 IPR023230 Glycoside hydrolase, family 2, conserved site ABE28_020035 IPR006101 Glycoside hydrolase, family 2 ABE28_020035 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase ABE28_020035 IPR006103 Glycoside hydrolase family 2, catalytic domain ABE28_020035 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich ABE28_020035 IPR006104 Glycosyl hydrolases family 2, sugar binding domain ABE28_020035 IPR017853 Glycoside hydrolase superfamily ABE28_020035 IPR013783 Immunoglobulin-like fold ABE28_020035 IPR032312 Beta-galactosidase, domain 4 ABE28_020035 IPR014718 Glycoside hydrolase-type carbohydrate-binding ABE28_020035 IPR008979 Galactose-binding-like domain superfamily ABE28_020040 IPR000843 LacI-type HTH domain ABE28_020040 IPR028082 Periplasmic binding protein-like I ABE28_020040 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_020045 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_020045 IPR035906 MetI-like superfamily ABE28_020050 IPR035906 MetI-like superfamily ABE28_020050 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_020055 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein ABE28_020055 IPR006059 Bacterial extracellular solute-binding protein ABE28_020060 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type ABE28_020060 IPR024674 HpaB/PvcC/4-BUDH N-terminal ABE28_020060 IPR024719 HpaB/PvcC/4-BUDH C-terminal ABE28_020060 IPR004925 HpaB/PvcC/4-BUDH ABE28_020060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_020060 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_020065 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_020065 IPR036291 NAD(P)-binding domain superfamily ABE28_020075 IPR004685 Branched-chain amino acid transport system II carrier protein ABE28_020090 IPR004642 Serine dehydratase, alpha subunit ABE28_020090 IPR005130 Serine dehydratase-like, alpha subunit ABE28_020095 IPR005131 Serine dehydratase beta chain ABE28_020095 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit ABE28_020095 IPR029009 Allosteric substrate binding domain superfamily ABE28_020095 IPR002912 ACT domain ABE28_020100 IPR007349 Domain of unknown function DUF418 ABE28_020105 IPR007346 Endonuclease I ABE28_020110 IPR008334 5'-Nucleotidase, C-terminal ABE28_020110 IPR006146 5'-Nucleotidase, conserved site ABE28_020110 IPR036907 5'-Nucleotidase, C-terminal domain superfamily ABE28_020110 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_020110 IPR041827 CpdB, N-terminal metallophosphatase domain ABE28_020110 IPR019931 LPXTG cell wall anchor domain ABE28_020110 IPR029052 Metallo-dependent phosphatase-like ABE28_020110 IPR006179 5'-Nucleotidase/apyrase ABE28_020120 IPR017871 ABC transporter, conserved site ABE28_020120 IPR003593 AAA+ ATPase domain ABE28_020120 IPR003439 ABC transporter-like ABE28_020120 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020125 IPR000620 EamA domain ABE28_020130 IPR001160 Peptidase M20C, Xaa-His dipeptidase ABE28_020130 IPR011650 Peptidase M20, dimerisation domain ABE28_020130 IPR002933 Peptidase M20 ABE28_020140 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_020140 IPR000551 MerR-type HTH domain ABE28_020140 IPR009061 Putative DNA-binding domain superfamily ABE28_020140 IPR029442 GyrI-like small molecule binding domain ABE28_020145 IPR027455 Spermine/spermidine acetyltransferase, N-terminal ABE28_020145 IPR000182 GNAT domain ABE28_020145 IPR016181 Acyl-CoA N-acyltransferase ABE28_020155 IPR003439 ABC transporter-like ABE28_020155 IPR017871 ABC transporter, conserved site ABE28_020155 IPR015851 ABC transporter, NodI ABE28_020155 IPR005978 Nodulation ABC transporter, NodI ABE28_020155 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020155 IPR003593 AAA+ ATPase domain ABE28_020160 IPR009057 Homeobox-like domain superfamily ABE28_020160 IPR001647 DNA-binding HTH domain, TetR-type ABE28_020175 IPR003445 Cation transporter ABE28_020175 IPR004772 TrkH potassium transport family ABE28_020180 IPR003148 Regulator of K+ conductance, N-terminal ABE28_020180 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily ABE28_020180 IPR006037 Regulator of K+ conductance, C-terminal ABE28_020180 IPR036291 NAD(P)-binding domain superfamily ABE28_020185 IPR002645 STAS domain ABE28_020185 IPR036513 STAS domain superfamily ABE28_020190 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020190 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020190 IPR005149 Transcription regulator PadR, N-terminal ABE28_020200 IPR016040 NAD(P)-binding domain ABE28_020200 IPR005886 UDP-glucose 4-epimerase ABE28_020200 IPR036291 NAD(P)-binding domain superfamily ABE28_020205 IPR007554 CDP-glycerol glycerophosphotransferase ABE28_020205 IPR001173 Glycosyltransferase 2-like ABE28_020205 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_020210 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_020210 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type ABE28_020210 IPR005835 Nucleotidyl transferase domain ABE28_020215 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily ABE28_020215 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III ABE28_020215 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II ABE28_020215 IPR005843 Alpha-D-phosphohexomutase, C-terminal ABE28_020215 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I ABE28_020215 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III ABE28_020215 IPR005841 Alpha-D-phosphohexomutase superfamily ABE28_020215 IPR016066 Alpha-D-phosphohexomutase, conserved site ABE28_020220 IPR016040 NAD(P)-binding domain ABE28_020220 IPR036291 NAD(P)-binding domain superfamily ABE28_020225 IPR003752 Disulphide bond formation protein DsbB/BdbC ABE28_020225 IPR012187 Disulphide bond formation protein BdbC ABE28_020225 IPR023380 DsbB-like superfamily ABE28_020230 IPR012336 Thioredoxin-like fold ABE28_020230 IPR036249 Thioredoxin-like superfamily ABE28_020235 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020235 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020235 IPR000944 Transcription regulator Rrf2-type ABE28_020240 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain ABE28_020240 IPR003646 SH3-like domain, bacterial-type ABE28_020240 IPR007730 Sporulation-like domain ABE28_020245 IPR017441 Protein kinase, ATP binding site ABE28_020245 IPR011009 Protein kinase-like domain superfamily ABE28_020255 IPR013538 Activator of Hsp90 ATPase homologue 1-like ABE28_020255 IPR023393 START-like domain superfamily ABE28_020260 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020260 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020260 IPR001845 HTH ArsR-type DNA-binding domain ABE28_020260 IPR011991 ArsR-like helix-turn-helix domain ABE28_020265 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_020265 IPR023908 xxxLxxG heptad repeat ABE28_020265 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_020270 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020270 IPR000944 Transcription regulator Rrf2-type ABE28_020270 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020270 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_020275 IPR005746 Thioredoxin ABE28_020275 IPR036249 Thioredoxin-like superfamily ABE28_020275 IPR013766 Thioredoxin domain ABE28_020285 IPR019834 Glycoside hydrolase, family 8, conserved site ABE28_020285 IPR002037 Glycoside hydrolase, family 8 ABE28_020285 IPR008928 Six-hairpin glycosidase superfamily ABE28_020285 IPR012341 Six-hairpin glycosidase-like superfamily ABE28_020290 IPR002935 Class I-like SAM-dependent O-methyltransferase ABE28_020290 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_020320 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_020320 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020330 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020330 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020330 IPR000835 MarR-type HTH domain ABE28_020335 IPR011701 Major facilitator superfamily ABE28_020335 IPR036259 MFS transporter superfamily ABE28_020335 IPR020846 Major facilitator superfamily domain ABE28_020350 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020350 IPR003439 ABC transporter-like ABE28_020350 IPR003593 AAA+ ATPase domain ABE28_020360 IPR001509 NAD-dependent epimerase/dehydratase ABE28_020360 IPR036291 NAD(P)-binding domain superfamily ABE28_020370 IPR007344 GrpB/Dephospho-CoA kinase ABE28_020370 IPR000182 GNAT domain ABE28_020370 IPR016181 Acyl-CoA N-acyltransferase ABE28_020400 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal ABE28_020400 IPR024072 Dihydrofolate reductase-like domain superfamily ABE28_020405 IPR005950 Molybdate ABC transporter, substrate-binding protein ABE28_020405 IPR041879 YvgL-like, substrate binding domain ABE28_020410 IPR041657 Helix-turn-helix domain, group 17 ABE28_020410 IPR010093 SinI-like, DNA-binding domain ABE28_020410 IPR024370 PBP domain ABE28_020410 IPR009061 Putative DNA-binding domain superfamily ABE28_020420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_020420 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site ABE28_020420 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020420 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type ABE28_020420 IPR004839 Aminotransferase, class I/classII ABE28_020420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_020425 IPR003784 BioY protein ABE28_020430 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020430 IPR004472 Dethiobiotin synthase BioD ABE28_020435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_020435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_020435 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA ABE28_020435 IPR005814 Aminotransferase class-III ABE28_020435 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020445 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ABE28_020445 IPR011765 Peptidase M16, N-terminal ABE28_020470 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020470 IPR033738 Asparagine synthase, N-terminal domain ABE28_020470 IPR001962 Asparagine synthase ABE28_020470 IPR006426 Asparagine synthase, glutamine-hydrolyzing ABE28_020470 IPR017932 Glutamine amidotransferase type 2 domain ABE28_020485 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site ABE28_020485 IPR020846 Major facilitator superfamily domain ABE28_020485 IPR000109 Proton-dependent oligopeptide transporter family ABE28_020485 IPR036259 MFS transporter superfamily ABE28_020485 IPR005279 Dipeptide/tripeptide permease ABE28_020495 IPR025303 Deacetylase PdaC ABE28_020495 IPR021729 Domain of unknown function DUF3298 ABE28_020495 IPR037126 PdaC/RsiV-like superfamily ABE28_020500 IPR039425 RNA polymerase sigma-70 like ABE28_020500 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020500 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site ABE28_020500 IPR007627 RNA polymerase sigma-70 region 2 ABE28_020500 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 ABE28_020500 IPR013325 RNA polymerase sigma factor, region 2 ABE28_020500 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_020500 IPR014284 RNA polymerase sigma-70 like domain ABE28_020505 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_020505 IPR025303 Deacetylase PdaC ABE28_020505 IPR037126 PdaC/RsiV-like superfamily ABE28_020505 IPR017219 Peptidoglycan GlcNAc deacetylase ABE28_020505 IPR021729 Domain of unknown function DUF3298 ABE28_020505 IPR002509 NodB homology domain ABE28_020510 IPR026562 Probable transcriptional regulatory protein YeeN ABE28_020510 IPR026564 Transcriptional regulator TACO1-like, domain 3 ABE28_020510 IPR029072 YebC-like ABE28_020510 IPR017856 Integrase-like, N-terminal ABE28_020510 IPR002876 Transcriptional regulator TACO1-like ABE28_020530 IPR002035 von Willebrand factor, type A ABE28_020530 IPR036465 von Willebrand factor A-like domain superfamily ABE28_020535 IPR011704 ATPase, dynein-related, AAA domain ABE28_020535 IPR003593 AAA+ ATPase domain ABE28_020535 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020535 IPR001270 ClpA/B family ABE28_020540 IPR036291 NAD(P)-binding domain superfamily ABE28_020540 IPR016040 NAD(P)-binding domain ABE28_020545 IPR009057 Homeobox-like domain superfamily ABE28_020555 IPR012093 Pirin ABE28_020555 IPR014710 RmlC-like jelly roll fold ABE28_020555 IPR008778 Pirin, C-terminal domain ABE28_020555 IPR003829 Pirin, N-terminal domain ABE28_020555 IPR011051 RmlC-like cupin domain superfamily ABE28_020570 IPR009051 Alpha-helical ferredoxin ABE28_020570 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 ABE28_020570 IPR028261 Dihydroprymidine dehydrogenase domain II ABE28_020570 IPR023753 FAD/NAD(P)-binding domain ABE28_020570 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_020575 IPR013785 Aldolase-type TIM barrel ABE28_020575 IPR017932 Glutamine amidotransferase type 2 domain ABE28_020575 IPR002932 Glutamate synthase domain ABE28_020575 IPR002489 Glutamate synthase, alpha subunit, C-terminal ABE28_020575 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily ABE28_020575 IPR006982 Glutamate synthase, central-N ABE28_020575 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020580 IPR005119 LysR, substrate-binding ABE28_020580 IPR000847 Transcription regulator HTH, LysR ABE28_020580 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020580 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020595 IPR000182 GNAT domain ABE28_020595 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type ABE28_020595 IPR016181 Acyl-CoA N-acyltransferase ABE28_020610 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_020610 IPR015500 Peptidase S8, subtilisin-related ABE28_020610 IPR034084 Thermitase-like, domain ABE28_020610 IPR036852 Peptidase S8/S53 domain superfamily ABE28_020610 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_020610 IPR000209 Peptidase S8/S53 domain ABE28_020610 IPR013783 Immunoglobulin-like fold ABE28_020610 IPR041498 Bacterial Ig domain ABE28_020615 IPR002300 Aminoacyl-tRNA synthetase, class Ia ABE28_020615 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_020615 IPR002302 Leucine-tRNA ligase ABE28_020615 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain ABE28_020615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_020615 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_020615 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding ABE28_020615 IPR025709 Leucyl-tRNA synthetase, editing domain ABE28_020615 IPR015413 Methionyl/Leucyl tRNA synthetase ABE28_020620 IPR019668 Uncharacterised protein family YtzC ABE28_020625 IPR018958 Knr4/Smi1-like domain ABE28_020625 IPR037883 Knr4/Smi1-like domain superfamily ABE28_020630 IPR006638 Elp3/MiaB/NifB ABE28_020630 IPR039661 ELP3/YhcC ABE28_020630 IPR032432 Radical SAM, C-terminal extension ABE28_020630 IPR005911 Protein YhcC-like ABE28_020630 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_020630 IPR007197 Radical SAM ABE28_020635 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_020635 IPR010719 Putative rRNA methylase ABE28_020645 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020645 IPR029058 Alpha/Beta hydrolase fold ABE28_020645 IPR022742 Serine aminopeptidase, S33 ABE28_020650 IPR011004 Trimeric LpxA-like superfamily ABE28_020650 IPR001451 Hexapeptide repeat ABE28_020660 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site ABE28_020660 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal ABE28_020660 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal ABE28_020660 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising ABE28_020665 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation ABE28_020665 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase ABE28_020665 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal ABE28_020665 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal ABE28_020665 IPR017476 UDP-glucose/GDP-mannose dehydrogenase ABE28_020665 IPR036291 NAD(P)-binding domain superfamily ABE28_020665 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_020665 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily ABE28_020680 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ABE28_020680 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ABE28_020685 IPR003660 HAMP domain ABE28_020685 IPR007891 CHASE3 ABE28_020685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_020685 IPR004090 Chemotaxis methyl-accepting receptor ABE28_020700 IPR015947 PUA-like superfamily ABE28_020700 IPR019699 Protein of unknown function DUF2584 ABE28_020705 IPR002471 Peptidase S9, serine active site ABE28_020705 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain ABE28_020705 IPR029058 Alpha/Beta hydrolase fold ABE28_020715 IPR015397 Glycosyl transferase 1, domain A ABE28_020715 IPR001296 Glycosyl transferase, family 1 ABE28_020720 IPR006118 Recombinase, conserved site ABE28_020720 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily ABE28_020720 IPR006120 Resolvase, HTH domain ABE28_020720 IPR006119 Resolvase, N-terminal catalytic domain ABE28_020730 IPR003593 AAA+ ATPase domain ABE28_020730 IPR003439 ABC transporter-like ABE28_020730 IPR017871 ABC transporter, conserved site ABE28_020730 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020735 IPR035906 MetI-like superfamily ABE28_020735 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_020740 IPR020084 NUDIX hydrolase, conserved site ABE28_020740 IPR014078 Nucleoside triphosphatase YtkD ABE28_020740 IPR000086 NUDIX hydrolase domain ABE28_020740 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_020740 IPR020476 NUDIX hydrolase ABE28_020755 IPR023188 DNA-binding protein Dps, conserved site ABE28_020755 IPR002177 DNA-binding protein Dps ABE28_020755 IPR008331 Ferritin/DPS protein domain ABE28_020755 IPR009078 Ferritin-like superfamily ABE28_020755 IPR012347 Ferritin-like ABE28_020760 IPR003815 S-ribosylhomocysteinase (LuxS) ABE28_020760 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily ABE28_020760 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like ABE28_020765 IPR002696 Putative membrane protein insertion efficiency factor ABE28_020770 IPR006127 Periplasmic solute binding protein, ZnuA-like ABE28_020770 IPR015304 ZinT domain ABE28_020770 IPR012674 Calycin ABE28_020770 IPR006128 Adhesion lipoprotein ABE28_020770 IPR006129 Adhesin B ABE28_020775 IPR004682 TRAP transporter solute receptor, DctP family ABE28_020775 IPR018389 TRAP transporter solute receptor DctP/TeaA ABE28_020775 IPR038404 TRAP transporter solute receptor DctP superfamily ABE28_020780 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_020780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_020780 IPR000014 PAS domain ABE28_020780 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB ABE28_020780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_020780 IPR029151 Periplasmic sensor-like domain superfamily ABE28_020780 IPR033463 Single cache domain 3 ABE28_020780 IPR005467 Histidine kinase domain ABE28_020780 IPR039506 SpoOB, alpha-helical domain ABE28_020780 IPR035965 PAS domain superfamily ABE28_020785 IPR006793 FaeA-like protein ABE28_020785 IPR024187 Signal transduction response regulator, citrate/malate metabolism ABE28_020785 IPR011006 CheY-like superfamily ABE28_020785 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020785 IPR001789 Signal transduction response regulator, receiver domain ABE28_020790 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_020790 IPR010197 o-Succinylbenzoate synthase, MenC type 2 ABE28_020790 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_020790 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_020790 IPR029065 Enolase C-terminal domain-like ABE28_020790 IPR029017 Enolase-like, N-terminal ABE28_020795 IPR000873 AMP-dependent synthetase/ligase ABE28_020795 IPR010192 2-succinylbenzoate--CoA ligase ABE28_020795 IPR020845 AMP-binding, conserved site ABE28_020795 IPR042099 AMP-dependent synthetase-like superfamily ABE28_020795 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_020800 IPR029045 ClpP/crotonase-like domain superfamily ABE28_020800 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB ABE28_020800 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site ABE28_020800 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_020800 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_020805 IPR029058 Alpha/Beta hydrolase fold ABE28_020805 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020805 IPR000639 Epoxide hydrolase-like ABE28_020805 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase ABE28_020810 IPR032264 Menaquinone biosynthesis protein MenD, middle domain ABE28_020810 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding ABE28_020810 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase ABE28_020810 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain ABE28_020810 IPR029061 Thiamin diphosphate-binding fold ABE28_020810 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_020815 IPR004561 Isochorismate synthase ABE28_020815 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_020815 IPR034681 Isochorismate synthase MenF ABE28_020815 IPR005801 ADC synthase ABE28_020820 IPR026046 UbiA prenyltransferase domain containing protein 1 ABE28_020820 IPR000537 UbiA prenyltransferase family ABE28_020820 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase ABE28_020825 IPR037187 DksA, N-terminal domain superfamily ABE28_020825 IPR014240 Regulatory protein, YteA family ABE28_020825 IPR000962 Zinc finger, DksA/TraR C4-type ABE28_020965 IPR003416 MgtC/SapB/SrpB/YhiD family ABE28_020975 IPR004839 Aminotransferase, class I/classII ABE28_020975 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020975 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_020975 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_020990 IPR029041 FAD-linked oxidoreductase-like ABE28_020990 IPR015659 Proline oxidase family ABE28_020990 IPR002872 Proline dehydrogenase domain ABE28_020990 IPR008219 Proline dehydrogenase, bacteria and archaea ABE28_020995 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_020995 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_020995 IPR005932 1-pyrroline-5-carboxylate dehydrogenase ABE28_020995 IPR015590 Aldehyde dehydrogenase domain ABE28_020995 IPR016160 Aldehyde dehydrogenase, cysteine active site ABE28_020995 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_020995 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_021005 IPR042070 PucR C-terminal helix-turn-helix domain superfamily ABE28_021005 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_021005 IPR041522 CdaR, GGDEF-like domain ABE28_021010 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_021010 IPR001279 Metallo-beta-lactamase ABE28_021015 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021015 IPR006076 FAD dependent oxidoreductase ABE28_021015 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily ABE28_021015 IPR031656 Alpha-glycerophosphate oxidase, C-terminal ABE28_021015 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase ABE28_021020 IPR005999 Glycerol kinase ABE28_021020 IPR018485 Carbohydrate kinase, FGGY, C-terminal ABE28_021020 IPR018483 Carbohydrate kinase, FGGY, conserved site ABE28_021020 IPR000577 Carbohydrate kinase, FGGY ABE28_021020 IPR018484 Carbohydrate kinase, FGGY, N-terminal ABE28_021025 IPR023271 Aquaporin-like ABE28_021025 IPR000425 Major intrinsic protein ABE28_021025 IPR022357 Major intrinsic protein, conserved site ABE28_021030 IPR006699 Glycerol uptake operon antiterminator ABE28_021030 IPR035928 GlpP-like superfamily ABE28_021040 IPR038071 UROD/MetE-like superfamily ABE28_021040 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal ABE28_021060 IPR003673 CoA-transferase family III ABE28_021060 IPR023606 CoA-transferase family III domain superfamily ABE28_021065 IPR004841 Amino acid permease/ SLC12A domain ABE28_021065 IPR004840 Amino acid permease, conserved site ABE28_021070 IPR001570 Peptidase M4, C-terminal ABE28_021070 IPR025711 PepSY domain ABE28_021070 IPR013856 Peptidase M4 domain ABE28_021070 IPR011096 FTP domain ABE28_021070 IPR027268 Peptidase M4/M1, CTD superfamily ABE28_021070 IPR023612 Peptidase M4 ABE28_021090 IPR017853 Glycoside hydrolase superfamily ABE28_021090 IPR019800 Glycoside hydrolase, family 3, active site ABE28_021090 IPR002772 Glycoside hydrolase family 3 C-terminal domain ABE28_021090 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily ABE28_021090 IPR001764 Glycoside hydrolase, family 3, N-terminal ABE28_021090 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily ABE28_021100 IPR021586 Transcription regulator TrmB, C-terminal ABE28_021100 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021100 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021100 IPR002831 Transcription regulator TrmB, N-terminal ABE28_021105 IPR002781 Transmembrane protein TauE-like ABE28_021115 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ABE28_021115 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ABE28_021115 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase ABE28_021115 IPR029000 Cyclophilin-like domain superfamily ABE28_021120 IPR014188 Acrylyl-CoA reductase AcuI ABE28_021120 IPR020843 Polyketide synthase, enoylreductase domain ABE28_021120 IPR036291 NAD(P)-binding domain superfamily ABE28_021120 IPR011032 GroES-like superfamily ABE28_021120 IPR013154 Alcohol dehydrogenase, N-terminal ABE28_021120 IPR013149 Alcohol dehydrogenase, C-terminal ABE28_021125 IPR011105 Cell wall hydrolase, SleB ABE28_021125 IPR042047 Cell wall hydrolase SleB, domain 1 ABE28_021130 IPR009711 Uncharacterised protein family UPF0473 ABE28_021135 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_021135 IPR018146 Glyoxalase I, conserved site ABE28_021135 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_021135 IPR037523 Vicinal oxygen chelate (VOC) domain ABE28_021140 IPR001209 Ribosomal protein S14 ABE28_021140 IPR023036 Ribosomal protein S14, bacterial/plastid ABE28_021140 IPR018271 Ribosomal protein S14, conserved site ABE28_021145 IPR011332 Zinc-binding ribosomal protein ABE28_021145 IPR018264 Ribosomal protein L33, conserved site ABE28_021145 IPR001705 Ribosomal protein L33 ABE28_021145 IPR038584 Ribosomal protein L33 superfamily ABE28_021150 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021150 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABE28_021150 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_021155 IPR035901 GIY-YIG endonuclease superfamily ABE28_021155 IPR000305 GIY-YIG endonuclease ABE28_021155 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein ABE28_021160 IPR029051 Domain of unknown function DUF4352 ABE28_021160 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily ABE28_021160 IPR012640 Membrane lipoprotein, lipid attachment site ABE28_021165 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_021165 IPR018299 Alkaline phosphatase, active site ABE28_021165 IPR001952 Alkaline phosphatase ABE28_021170 IPR011054 Rudiment single hybrid motif ABE28_021170 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase ABE28_021170 IPR016185 Pre-ATP-grasp domain superfamily ABE28_021170 IPR013815 ATP-grasp fold, subdomain 1 ABE28_021170 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABE28_021170 IPR011761 ATP-grasp fold ABE28_021180 IPR036779 LysM domain superfamily ABE28_021180 IPR000834 Peptidase M14, carboxypeptidase A ABE28_021180 IPR018392 LysM domain ABE28_021180 IPR034274 ENP1, carboxypeptidase domain ABE28_021185 IPR020835 Catalase superfamily ABE28_021185 IPR010582 Catalase immune-responsive domain ABE28_021185 IPR002226 Catalase haem-binding site ABE28_021185 IPR024708 Catalase active site ABE28_021185 IPR037060 Catalase core domain superfamily ABE28_021185 IPR011614 Catalase core domain ABE28_021185 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 ABE28_021185 IPR018028 Catalase, mono-functional, haem-containing ABE28_021185 IPR040333 Catalase, clade 3 ABE28_021195 IPR001647 DNA-binding HTH domain, TetR-type ABE28_021195 IPR009057 Homeobox-like domain superfamily ABE28_021195 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_021200 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV ABE28_021205 IPR007346 Endonuclease I ABE28_021210 IPR004841 Amino acid permease/ SLC12A domain ABE28_021210 IPR004840 Amino acid permease, conserved site ABE28_021220 IPR006146 5'-Nucleotidase, conserved site ABE28_021220 IPR041827 CpdB, N-terminal metallophosphatase domain ABE28_021220 IPR019931 LPXTG cell wall anchor domain ABE28_021220 IPR006179 5'-Nucleotidase/apyrase ABE28_021220 IPR008334 5'-Nucleotidase, C-terminal ABE28_021220 IPR036907 5'-Nucleotidase, C-terminal domain superfamily ABE28_021220 IPR029052 Metallo-dependent phosphatase-like ABE28_021220 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type ABE28_021225 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_021225 IPR007837 DNA damage-inducible protein DinB ABE28_021235 IPR007630 RNA polymerase sigma-70 region 4 ABE28_021235 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_021235 IPR014284 RNA polymerase sigma-70 like domain ABE28_021245 IPR023343 Penicillin amidase type, domain 1 ABE28_021245 IPR014395 Penicillin/GL-7-ACA/AHL acylase ABE28_021245 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_021245 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase ABE28_021250 IPR001207 Transposase, mutator type ABE28_021270 IPR011701 Major facilitator superfamily ABE28_021270 IPR020846 Major facilitator superfamily domain ABE28_021270 IPR036259 MFS transporter superfamily ABE28_021275 IPR002293 Amino acid/polyamine transporter I ABE28_021280 IPR003824 Undecaprenyl-diphosphatase UppP ABE28_021285 IPR030395 Glycerophosphodiester phosphodiesterase domain ABE28_021285 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily ABE28_021290 IPR038300 SASP, alpha/beta-type superfamily ABE28_021290 IPR001448 Small acid-soluble spore protein, alpha/beta-type ABE28_021290 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site ABE28_021295 IPR029070 Chitinase insertion domain superfamily ABE28_021295 IPR001223 Glycoside hydrolase family 18, catalytic domain ABE28_021295 IPR018392 LysM domain ABE28_021295 IPR011583 Chitinase II ABE28_021295 IPR036779 LysM domain superfamily ABE28_021295 IPR017853 Glycoside hydrolase superfamily ABE28_021295 IPR041704 CFLE, GH18 catalytic domain ABE28_021300 IPR003148 Regulator of K+ conductance, N-terminal ABE28_021300 IPR013099 Potassium channel domain ABE28_021300 IPR036291 NAD(P)-binding domain superfamily ABE28_021305 IPR036491 YugN-like superfamily ABE28_021305 IPR014967 Uncharacterised protein family, YugN-like ABE28_021315 IPR001672 Phosphoglucose isomerase (PGI) ABE28_021315 IPR035482 Phosphoglucose isomerase, SIS domain 2 ABE28_021315 IPR035476 Phosphoglucose isomerase, SIS domain 1 ABE28_021315 IPR018189 Phosphoglucose isomerase, conserved site ABE28_021320 IPR018211 Alcohol dehydrogenase, iron-type, conserved site ABE28_021320 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA ABE28_021325 IPR007211 Protein of unknown function DUF378 ABE28_021330 IPR022967 RNA-binding domain, S1 ABE28_021330 IPR012340 Nucleic acid-binding, OB-fold ABE28_021330 IPR003029 S1 domain ABE28_021340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_021340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_021340 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021340 IPR004839 Aminotransferase, class I/classII ABE28_021340 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ABE28_021345 IPR011008 Dimeric alpha-beta barrel ABE28_021345 IPR019888 Transcription regulator AsnC-type ABE28_021345 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021345 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021345 IPR000485 AsnC-type HTH domain ABE28_021345 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_021350 IPR029058 Alpha/Beta hydrolase fold ABE28_021350 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal ABE28_021350 IPR000639 Epoxide hydrolase-like ABE28_021350 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021360 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_021360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_021360 IPR004839 Aminotransferase, class I/classII ABE28_021360 IPR027619 Putative C-S lyase ABE28_021370 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE ABE28_021370 IPR002491 ABC transporter periplasmic binding domain ABE28_021375 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_021375 IPR037294 ABC transporter, BtuC-like ABE28_021380 IPR003593 AAA+ ATPase domain ABE28_021380 IPR003439 ABC transporter-like ABE28_021380 IPR017871 ABC transporter, conserved site ABE28_021380 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021385 IPR012349 FMN-binding split barrel ABE28_021385 IPR019595 Domain of unknown function DUF2470 ABE28_021385 IPR037119 Haem oxygenase HugZ-like superfamily ABE28_021385 IPR026324 Haem oxygenase, HugZ ABE28_021385 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative ABE28_021400 IPR011924 Lipoprotein releasing system, ATP-binding protein ABE28_021400 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021400 IPR017871 ABC transporter, conserved site ABE28_021400 IPR003439 ABC transporter-like ABE28_021400 IPR015854 ABC transporter, lipoprotein release, LolD ABE28_021400 IPR003593 AAA+ ATPase domain ABE28_021410 IPR014240 Regulatory protein, YteA family ABE28_021410 IPR037187 DksA, N-terminal domain superfamily ABE28_021410 IPR000962 Zinc finger, DksA/TraR C4-type ABE28_021420 IPR037063 Bacterial Pleckstrin homology domain superfamily ABE28_021420 IPR012544 Bacterial Pleckstrin homology domain ABE28_021420 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain ABE28_021425 IPR000182 GNAT domain ABE28_021425 IPR016181 Acyl-CoA N-acyltransferase ABE28_021435 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain ABE28_021435 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site ABE28_021435 IPR029000 Cyclophilin-like domain superfamily ABE28_021435 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase ABE28_021440 IPR038080 Kinase associated protein B superfamily ABE28_021440 IPR014916 Kinase associated protein B ABE28_021445 IPR012337 Ribonuclease H-like superfamily ABE28_021445 IPR036397 Ribonuclease H superfamily ABE28_021445 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_021450 IPR023346 Lysozyme-like domain superfamily ABE28_021450 IPR001460 Penicillin-binding protein, transpeptidase ABE28_021450 IPR001264 Glycosyl transferase, family 51 ABE28_021450 IPR012338 Beta-lactamase/transpeptidase-like ABE28_021450 IPR036950 Penicillin binding protein transglycosylase domain ABE28_021460 IPR035289 Protein of unknown function DUF5366 ABE28_021465 IPR025383 Domain of unknown function DUF4040 ABE28_021465 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup ABE28_021465 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ABE28_021465 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal ABE28_021465 IPR005663 Monovalent cation proton antiporter subunit A ABE28_021470 IPR005281 Monovalent cation:proton antiporter, subunit B ABE28_021470 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ABE28_021475 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABE28_021480 IPR003918 NADH:ubiquinone oxidoreductase ABE28_021480 IPR004775 Na(+)/H(+) antiporter subunit D1 ABE28_021480 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ABE28_021485 IPR002758 Na+/H+ antiporter subunit E ABE28_021490 IPR007208 Na(+)/H(+) antiporter subunit F-like ABE28_021505 IPR006683 Thioesterase domain ABE28_021505 IPR003736 Phenylacetic acid degradation-related domain ABE28_021505 IPR029069 HotDog domain superfamily ABE28_021510 IPR023214 HAD superfamily ABE28_021510 IPR036412 HAD-like superfamily ABE28_021510 IPR009206 Nucleotidase, putative ABE28_021510 IPR010708 5'(3')-deoxyribonucleotidase ABE28_021515 IPR002938 FAD-binding domain ABE28_021515 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021520 IPR004794 Riboflavin biosynthesis protein RibD ABE28_021520 IPR016193 Cytidine deaminase-like ABE28_021520 IPR016192 APOBEC/CMP deaminase, zinc-binding ABE28_021520 IPR024072 Dihydrofolate reductase-like domain superfamily ABE28_021520 IPR011549 Riboflavin-specific deaminase, C-terminal ABE28_021520 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal ABE28_021520 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_021525 IPR016299 Riboflavin biosynthesis protein RibBA ABE28_021525 IPR036144 RibA-like superfamily ABE28_021525 IPR000926 GTP cyclohydrolase II, RibA ABE28_021525 IPR032677 GTP cyclohydrolase II ABE28_021525 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB ABE28_021525 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABE28_021535 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal ABE28_021535 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal ABE28_021535 IPR023042 Peptidase M17, leucine aminopeptidase ABE28_021535 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B ABE28_021540 IPR003832 Protein of unknown function DUF212 ABE28_021550 IPR036908 RlpA-like domain superfamily ABE28_021550 IPR010611 3D domain ABE28_021555 IPR025917 Putative membrane protein YuiB ABE28_021560 IPR036412 HAD-like superfamily ABE28_021560 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_021560 IPR020476 NUDIX hydrolase ABE28_021560 IPR023214 HAD superfamily ABE28_021560 IPR020084 NUDIX hydrolase, conserved site ABE28_021560 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021560 IPR000086 NUDIX hydrolase domain ABE28_021565 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021565 IPR023753 FAD/NAD(P)-binding domain ABE28_021570 IPR022890 Ferredoxin--NADP reductase, type 2 ABE28_021570 IPR023753 FAD/NAD(P)-binding domain ABE28_021570 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021580 IPR016092 FeS cluster insertion protein ABE28_021580 IPR017870 FeS cluster insertion, C-terminal, conserved site ABE28_021580 IPR000361 FeS cluster biogenesis ABE28_021580 IPR035903 HesB-like domain superfamily ABE28_021590 IPR009910 Protein of unknown function DUF1450 ABE28_021590 IPR022916 Protein of unknown function UPF0349 ABE28_021595 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021595 IPR023753 FAD/NAD(P)-binding domain ABE28_021600 IPR038218 YuzD-like superfamily ABE28_021600 IPR009190 Protein of unknown function DUF1462 ABE28_021600 IPR036249 Thioredoxin-like superfamily ABE28_021605 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal ABE28_021605 IPR034904 Fe-S cluster assembly domain superfamily ABE28_021610 IPR000870 Homoserine kinase ABE28_021610 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_021610 IPR013750 GHMP kinase, C-terminal domain ABE28_021610 IPR006204 GHMP kinase N-terminal domain ABE28_021610 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_021610 IPR006203 GHMP kinase, ATP-binding, conserved site ABE28_021610 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_021615 IPR026260 Threonine synthase, bacterial/archaeal ABE28_021615 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site ABE28_021615 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_021615 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_021615 IPR004450 Threonine synthase-like ABE28_021620 IPR001342 Homoserine dehydrogenase, catalytic ABE28_021620 IPR016204 Homoserine dehydrogenase ABE28_021620 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding ABE28_021620 IPR002912 ACT domain ABE28_021620 IPR036291 NAD(P)-binding domain superfamily ABE28_021620 IPR019811 Homoserine dehydrogenase, conserved site ABE28_021630 IPR011009 Protein kinase-like domain superfamily ABE28_021630 IPR014254 Spore coat protein YutH ABE28_021635 IPR036681 PgpA-like superfamily ABE28_021635 IPR026038 Putative phosphatidylglycerophosphatase ABE28_021635 IPR007686 YutG/PgpA domain ABE28_021640 IPR012337 Ribonuclease H-like superfamily ABE28_021640 IPR001584 Integrase, catalytic core ABE28_021640 IPR036397 Ribonuclease H superfamily ABE28_021640 IPR025948 HTH-like domain ABE28_021640 IPR038965 Transposase InsF-like ABE28_021650 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021650 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 ABE28_021650 IPR023214 HAD superfamily ABE28_021650 IPR036412 HAD-like superfamily ABE28_021655 IPR037038 Bsu32300-like superfamily ABE28_021655 IPR008201 Protein of unknown function DUF86 ABE28_021670 IPR038141 YutD-like superfamily ABE28_021670 IPR009370 Protein of unknown function DUF1027 ABE28_021675 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_021680 IPR013785 Aldolase-type TIM barrel ABE28_021680 IPR031691 Lipoyl synthase, N-terminal ABE28_021680 IPR006638 Elp3/MiaB/NifB ABE28_021680 IPR007197 Radical SAM ABE28_021680 IPR003698 Lipoyl synthase ABE28_021685 IPR016047 Peptidase M23 ABE28_021685 IPR011055 Duplicated hybrid motif ABE28_021690 IPR014197 Sporulation protein YunB ABE28_021695 IPR037522 HD-GYP domain ABE28_021695 IPR006675 HDIG domain ABE28_021695 IPR003607 HD/PDEase domain ABE28_021695 IPR021812 Protein of unknown function DUF3391 ABE28_021695 IPR006674 HD domain ABE28_021700 IPR014931 Protein of unknown function DUF1805 ABE28_021700 IPR036493 Hypothetical protein YunC superfamily ABE28_021705 IPR011240 Phosphoesterase-related protein YunD ABE28_021705 IPR036907 5'-Nucleotidase, C-terminal domain superfamily ABE28_021705 IPR006179 5'-Nucleotidase/apyrase ABE28_021705 IPR008334 5'-Nucleotidase, C-terminal ABE28_021705 IPR029052 Metallo-dependent phosphatase-like ABE28_021710 IPR002781 Transmembrane protein TauE-like ABE28_021715 IPR036520 UPF0759 superfamily ABE28_021715 IPR002763 Protein of unknown function DUF72 ABE28_021725 IPR010231 SUF system FeS cluster assembly, SufB ABE28_021725 IPR000825 SUF system FeS cluster assembly, SufBD ABE28_021725 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABE28_021730 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal ABE28_021735 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_021735 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_021735 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_021735 IPR000192 Aminotransferase class V domain ABE28_021735 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021735 IPR016454 Cysteine desulfurase ABE28_021735 IPR010970 Cysteine desulfurase, SufS ABE28_021740 IPR011542 SUF system FeS cluster assembly, SufD ABE28_021740 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABE28_021740 IPR000825 SUF system FeS cluster assembly, SufBD ABE28_021745 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021745 IPR017871 ABC transporter, conserved site ABE28_021745 IPR003439 ABC transporter-like ABE28_021745 IPR003593 AAA+ ATPase domain ABE28_021745 IPR010230 FeS cluster assembly SUF system, ATPase SufC ABE28_021760 IPR036397 Ribonuclease H superfamily ABE28_021760 IPR012337 Ribonuclease H-like superfamily ABE28_021760 IPR001584 Integrase, catalytic core ABE28_021760 IPR025948 HTH-like domain ABE28_021760 IPR038965 Transposase InsF-like ABE28_021765 IPR004872 Lipoprotein NlpA family ABE28_021770 IPR000515 ABC transporter type 1, transmembrane domain MetI-like ABE28_021770 IPR035906 MetI-like superfamily ABE28_021775 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal ABE28_021775 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain ABE28_021775 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021775 IPR018449 NIL domain ABE28_021775 IPR003439 ABC transporter-like ABE28_021775 IPR003593 AAA+ ATPase domain ABE28_021775 IPR017871 ABC transporter, conserved site ABE28_021780 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_021780 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_021780 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021780 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme ABE28_021780 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase ABE28_021785 IPR013766 Thioredoxin domain ABE28_021785 IPR036249 Thioredoxin-like superfamily ABE28_021790 IPR034141 Ribonuclease M5-like, TOPRIM domain ABE28_021790 IPR006171 TOPRIM domain ABE28_021795 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site ABE28_021795 IPR011053 Single hybrid motif ABE28_021795 IPR017453 Glycine cleavage system H-protein, subgroup ABE28_021795 IPR002930 Glycine cleavage system H-protein ABE28_021795 IPR033753 Glycine cleavage system H-protein/Simiate ABE28_021795 IPR000089 Biotin/lipoyl attachment ABE28_021800 IPR006660 Arsenate reductase-like ABE28_021800 IPR036249 Thioredoxin-like superfamily ABE28_021800 IPR006504 Transcriptional regulator Spx/MgsR ABE28_021805 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_021805 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_021805 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_021805 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_021805 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_021805 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_021805 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_021810 IPR020613 Thiolase, conserved site ABE28_021810 IPR020610 Thiolase, active site ABE28_021810 IPR020616 Thiolase, N-terminal ABE28_021810 IPR020615 Thiolase, acyl-enzyme intermediate active site ABE28_021810 IPR016039 Thiolase-like ABE28_021810 IPR002155 Thiolase ABE28_021810 IPR020617 Thiolase, C-terminal ABE28_021815 IPR029045 ClpP/crotonase-like domain superfamily ABE28_021815 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_021815 IPR036291 NAD(P)-binding domain superfamily ABE28_021815 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_021815 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_021815 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_021815 IPR001753 Enoyl-CoA hydratase/isomerase ABE28_021820 IPR025625 YuzL-like protein ABE28_021825 IPR002872 Proline dehydrogenase domain ABE28_021825 IPR015659 Proline oxidase family ABE28_021825 IPR029041 FAD-linked oxidoreductase-like ABE28_021825 IPR008219 Proline dehydrogenase, bacteria and archaea ABE28_021835 IPR012851 Spore coat protein CotF-like ABE28_021845 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA ABE28_021845 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site ABE28_021845 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB ABE28_021850 IPR001626 ABC transporter, TroCD-like ABE28_021850 IPR037294 ABC transporter, BtuC-like ABE28_021855 IPR037294 ABC transporter, BtuC-like ABE28_021855 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021855 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021855 IPR001626 ABC transporter, TroCD-like ABE28_021860 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021860 IPR017871 ABC transporter, conserved site ABE28_021860 IPR003439 ABC transporter-like ABE28_021860 IPR003593 AAA+ ATPase domain ABE28_021865 IPR006128 Adhesion lipoprotein ABE28_021865 IPR006127 Periplasmic solute binding protein, ZnuA-like ABE28_021865 IPR006129 Adhesin B ABE28_021870 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_021870 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_021870 IPR000843 LacI-type HTH domain ABE28_021870 IPR028082 Periplasmic binding protein-like I ABE28_021875 IPR004840 Amino acid permease, conserved site ABE28_021875 IPR004841 Amino acid permease/ SLC12A domain ABE28_021885 IPR008844 Spore germination GerAC ABE28_021885 IPR038501 Spore germination GerAC superfamily ABE28_021890 IPR004761 Spore germination GerAB ABE28_021895 IPR004995 Bacillus/Clostridium Ger spore germination protein ABE28_021925 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABE28_021925 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABE28_021930 IPR012160 Lipoteichoic acid synthase-like ABE28_021930 IPR000917 Sulfatase, N-terminal ABE28_021930 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_021935 IPR002491 ABC transporter periplasmic binding domain ABE28_021935 IPR033870 FatB domain ABE28_021940 IPR003593 AAA+ ATPase domain ABE28_021940 IPR017871 ABC transporter, conserved site ABE28_021940 IPR003439 ABC transporter-like ABE28_021940 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021945 IPR037294 ABC transporter, BtuC-like ABE28_021945 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_021950 IPR037294 ABC transporter, BtuC-like ABE28_021950 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_021965 IPR032696 Squalene cyclase, C-terminal ABE28_021965 IPR032697 Squalene cyclase, N-terminal ABE28_021965 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid ABE28_021965 IPR018333 Squalene cyclase ABE28_021990 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_021990 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_021990 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_021990 IPR005467 Histidine kinase domain ABE28_021990 IPR003660 HAMP domain ABE28_021990 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_021990 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_021995 IPR001789 Signal transduction response regulator, receiver domain ABE28_021995 IPR039420 Transcriptional regulatory protein WalR-like ABE28_021995 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021995 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_021995 IPR011006 CheY-like superfamily ABE28_022000 IPR002569 Peptide methionine sulphoxide reductase MsrA ABE28_022000 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ABE28_022005 IPR001789 Signal transduction response regulator, receiver domain ABE28_022005 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_022005 IPR011006 CheY-like superfamily ABE28_022005 IPR000792 Transcription regulator LuxR, C-terminal ABE28_022005 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022010 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_022010 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ABE28_022020 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022020 IPR000847 Transcription regulator HTH, LysR ABE28_022020 IPR005119 LysR, substrate-binding ABE28_022020 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022025 IPR018745 Domain of unknown function DUF2294 ABE28_022030 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding ABE28_022030 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_022030 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_022030 IPR041924 Formate dehydrogenase H, N-terminal ABE28_022030 IPR006478 Formate dehydrogenase, alpha subunit ABE28_022030 IPR006657 Molybdopterin dinucleotide-binding domain ABE28_022030 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain ABE28_022030 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain ABE28_022030 IPR006656 Molybdopterin oxidoreductase ABE28_022030 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_022030 IPR036010 2Fe-2S ferredoxin-like superfamily ABE28_022035 IPR012440 Protein of unknown function DUF1641 ABE28_022045 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain ABE28_022045 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_022045 IPR014614 Uncharacterised conserved protein UCP036654 ABE28_022050 IPR013525 ABC-2 type transporter ABE28_022050 IPR000412 ABC-2 transporter ABE28_022055 IPR025302 Domain of unknown function DUF4162 ABE28_022055 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA ABE28_022055 IPR017871 ABC transporter, conserved site ABE28_022055 IPR003439 ABC transporter-like ABE28_022055 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022055 IPR003593 AAA+ ATPase domain ABE28_022075 IPR023620 Small protein B ABE28_022075 IPR000037 SsrA-binding protein ABE28_022075 IPR020081 SsrA-binding protein, conserved site ABE28_022080 IPR001900 Ribonuclease II/R ABE28_022080 IPR022966 Ribonuclease II/R, conserved site ABE28_022080 IPR004476 Ribonuclease II/ribonuclease R ABE28_022080 IPR011805 Ribonuclease R ABE28_022080 IPR022967 RNA-binding domain, S1 ABE28_022080 IPR012340 Nucleic acid-binding, OB-fold ABE28_022080 IPR013223 Ribonuclease B, N-terminal OB domain ABE28_022080 IPR003029 S1 domain ABE28_022080 IPR040476 RNase II/RNase R, cold shock domain ABE28_022080 IPR011129 Cold shock domain ABE28_022085 IPR029058 Alpha/Beta hydrolase fold ABE28_022085 IPR012354 Esterase/lipase ABE28_022085 IPR022742 Serine aminopeptidase, S33 ABE28_022090 IPR004692 Preprotein translocase SecG subunit ABE28_022100 IPR003709 Peptidase M15B ABE28_022100 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily ABE28_022125 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_022125 IPR029017 Enolase-like, N-terminal ABE28_022125 IPR020810 Enolase, C-terminal TIM barrel domain ABE28_022125 IPR020809 Enolase, conserved site ABE28_022125 IPR020811 Enolase, N-terminal ABE28_022125 IPR000941 Enolase ABE28_022130 IPR011258 BPG-independent PGAM, N-terminal ABE28_022130 IPR006124 Metalloenzyme ABE28_022130 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily ABE28_022130 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_022130 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent ABE28_022135 IPR020861 Triosephosphate isomerase, active site ABE28_022135 IPR013785 Aldolase-type TIM barrel ABE28_022135 IPR000652 Triosephosphate isomerase ABE28_022135 IPR035990 Triosephosphate isomerase superfamily ABE28_022135 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic ABE28_022140 IPR015824 Phosphoglycerate kinase, N-terminal ABE28_022140 IPR001576 Phosphoglycerate kinase ABE28_022140 IPR036043 Phosphoglycerate kinase superfamily ABE28_022140 IPR015911 Phosphoglycerate kinase, conserved site ABE28_022145 IPR036291 NAD(P)-binding domain superfamily ABE28_022145 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I ABE28_022145 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site ABE28_022145 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain ABE28_022145 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain ABE28_022145 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family ABE28_022150 IPR037171 NagB/RpiA transferase-like ABE28_022150 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022150 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022150 IPR007324 Sugar-binding domain, putative ABE28_022160 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ABE28_022160 IPR007634 RNA polymerase sigma factor 54, DNA-binding ABE28_022160 IPR007046 RNA polymerase sigma factor 54, core-binding domain ABE28_022160 IPR000394 RNA polymerase sigma factor 54 ABE28_022170 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022170 IPR001907 ATP-dependent Clp protease proteolytic subunit ABE28_022170 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_022170 IPR018215 ClpP, Ser active site ABE28_022170 IPR033135 ClpP, histidine active site ABE28_022175 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ABE28_022175 IPR035895 HPr-like superfamily ABE28_022175 IPR000032 Phosphocarrier protein HPr-like ABE28_022180 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain ABE28_022180 IPR027434 Homing endonuclease ABE28_022180 IPR023054 Sporulation regulator WhiA, C-terminal ABE28_022180 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022180 IPR039518 WhiA, LAGLIDADG-like domain ABE28_022180 IPR003802 Sporulation regulator WhiA ABE28_022185 IPR010119 Gluconeogenesis factor ABE28_022185 IPR038136 Gluconeogenesis factor superfamily ABE28_022185 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 ABE28_022190 IPR005337 RapZ-like family ABE28_022190 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022195 IPR020476 NUDIX hydrolase ABE28_022195 IPR015797 NUDIX hydrolase-like domain superfamily ABE28_022195 IPR000086 NUDIX hydrolase domain ABE28_022200 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_022200 IPR023753 FAD/NAD(P)-binding domain ABE28_022200 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site ABE28_022200 IPR005982 Thioredoxin reductase ABE28_022205 IPR019734 Tetratricopeptide repeat ABE28_022205 IPR013026 Tetratricopeptide repeat-containing domain ABE28_022205 IPR011990 Tetratricopeptide-like helical domain superfamily ABE28_022210 IPR015590 Aldehyde dehydrogenase domain ABE28_022210 IPR016162 Aldehyde dehydrogenase, N-terminal ABE28_022210 IPR029510 Aldehyde dehydrogenase, glutamic acid active site ABE28_022210 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_022210 IPR016163 Aldehyde dehydrogenase, C-terminal ABE28_022215 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily ABE28_022215 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase ABE28_022215 IPR026660 Phosphoribosyl-AMP cyclohydrolase ABE28_022215 IPR023019 Histidine biosynthesis bifunctional protein HisIE ABE28_022215 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like ABE28_022215 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain ABE28_022220 IPR004651 Histidine biosynthesis, HisF ABE28_022220 IPR006062 Histidine biosynthesis ABE28_022220 IPR011060 Ribulose-phosphate binding barrel ABE28_022220 IPR013785 Aldolase-type TIM barrel ABE28_022225 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase ABE28_022225 IPR011060 Ribulose-phosphate binding barrel ABE28_022225 IPR013785 Aldolase-type TIM barrel ABE28_022225 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA ABE28_022225 IPR006062 Histidine biosynthesis ABE28_022230 IPR017926 Glutamine amidotransferase ABE28_022230 IPR029062 Class I glutamine amidotransferase-like ABE28_022230 IPR010139 Imidazole glycerol phosphate synthase, subunit H ABE28_022235 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily ABE28_022235 IPR000807 Imidazoleglycerol-phosphate dehydratase ABE28_022235 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site ABE28_022235 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_022240 IPR022695 Histidinol dehydrogenase, monofunctional ABE28_022240 IPR016161 Aldehyde/histidinol dehydrogenase ABE28_022240 IPR012131 Histidinol dehydrogenase ABE28_022240 IPR001692 Histidinol dehydrogenase, conserved site ABE28_022245 IPR018198 ATP phosphoribosyltransferase, conserved site ABE28_022245 IPR024893 ATP phosphoribosyltransferase HisG, short form ABE28_022245 IPR001348 ATP phosphoribosyltransferase HisG ABE28_022245 IPR013820 ATP phosphoribosyltransferase, catalytic domain ABE28_022250 IPR006195 Aminoacyl-tRNA synthetase, class II ABE28_022250 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain ABE28_022250 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit ABE28_022250 IPR004517 ATP phosphoribosyltransferase regulatory subunit ABE28_022260 IPR005754 Sortase family ABE28_022260 IPR041999 Sortase D, type 1 ABE28_022260 IPR023365 Sortase domain superfamily ABE28_022265 IPR001451 Hexapeptide repeat ABE28_022265 IPR011004 Trimeric LpxA-like superfamily ABE28_022270 IPR023214 HAD superfamily ABE28_022270 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_022270 IPR023733 Pyrophosphatase PpaX ABE28_022270 IPR036412 HAD-like superfamily ABE28_022270 IPR006439 HAD hydrolase, subfamily IA ABE28_022270 IPR041492 Haloacid dehalogenase-like hydrolase ABE28_022275 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain ABE28_022280 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt ABE28_022285 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_022285 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal ABE28_022285 IPR011104 HPr kinase/phosphorylase, C-terminal ABE28_022285 IPR003755 HPr(Ser) kinase/phosphorylase ABE28_022290 IPR014922 Domain of unknown function DUF1801 ABE28_022295 IPR025164 Putative adhesin ABE28_022295 IPR016599 Uncharacterised conserved protein UCP012569 ABE28_022300 IPR017871 ABC transporter, conserved site ABE28_022300 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022300 IPR003439 ABC transporter-like ABE28_022300 IPR003593 AAA+ ATPase domain ABE28_022300 IPR041102 UvrA, interaction domain ABE28_022300 IPR041552 UvrA DNA-binding domain ABE28_022300 IPR004602 UvrABC system subunit A ABE28_022305 IPR006935 Helicase/UvrB, N-terminal ABE28_022305 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_022305 IPR001650 Helicase, C-terminal ABE28_022305 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022305 IPR024759 UvrB, YAD/RRR-motif-containing domain ABE28_022305 IPR041471 UvrB, interaction domain ABE28_022305 IPR001943 UVR domain ABE28_022305 IPR036876 UVR domain superfamily ABE28_022305 IPR004807 UvrABC system, subunit B ABE28_022310 IPR019242 Protein of unknown function DUF2198 ABE28_022315 IPR024708 Catalase active site ABE28_022315 IPR020835 Catalase superfamily ABE28_022315 IPR011614 Catalase core domain ABE28_022315 IPR037060 Catalase core domain superfamily ABE28_022315 IPR002226 Catalase haem-binding site ABE28_022315 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 ABE28_022315 IPR018028 Catalase, mono-functional, haem-containing ABE28_022315 IPR010582 Catalase immune-responsive domain ABE28_022320 IPR000731 Sterol-sensing domain ABE28_022320 IPR004869 Membrane transport protein MMPL domain ABE28_022325 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABE28_022325 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABE28_022330 IPR037294 ABC transporter, BtuC-like ABE28_022330 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_022335 IPR037294 ABC transporter, BtuC-like ABE28_022335 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_022340 IPR002491 ABC transporter periplasmic binding domain ABE28_022345 IPR041489 PDZ domain 6 ABE28_022345 IPR036034 PDZ superfamily ABE28_022345 IPR001478 PDZ domain ABE28_022350 IPR001478 PDZ domain ABE28_022350 IPR036366 PGBD superfamily ABE28_022350 IPR036365 PGBD-like superfamily ABE28_022350 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022350 IPR002477 Peptidoglycan binding-like ABE28_022350 IPR004447 C-terminal-processing peptidase S41A ABE28_022350 IPR036034 PDZ superfamily ABE28_022350 IPR005151 Tail specific protease ABE28_022350 IPR041489 PDZ domain 6 ABE28_022355 IPR038765 Papain-like cysteine peptidase superfamily ABE28_022355 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_022360 IPR040690 FtsX, extracellular domain ABE28_022360 IPR004513 Cell division protein FtsX ABE28_022360 IPR003838 ABC transporter permease protein domain ABE28_022365 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022365 IPR003593 AAA+ ATPase domain ABE28_022365 IPR003439 ABC transporter-like ABE28_022365 IPR005286 Cell division protein FtsE, ATP-binding ABE28_022365 IPR017871 ABC transporter, conserved site ABE28_022375 IPR019264 Domain of unknown function DUF2179 ABE28_022375 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_022375 IPR003740 Uncharacterised membrane protein YitT ABE28_022380 IPR005139 Peptide chain release factor ABE28_022380 IPR004374 Peptide chain release factor 2 ABE28_022380 IPR000352 Peptide chain release factor class I ABE28_022385 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022385 IPR020937 SecA conserved site ABE28_022385 IPR011115 SecA DEAD-like, N-terminal ABE28_022385 IPR014018 SecA motor DEAD ABE28_022385 IPR036670 SecA, preprotein cross-linking domain superfamily ABE28_022385 IPR000185 Protein translocase subunit SecA ABE28_022385 IPR011116 SecA Wing/Scaffold ABE28_022385 IPR036266 SecA, Wing/Scaffold superfamily ABE28_022385 IPR011130 SecA, preprotein cross-linking domain ABE28_022385 IPR004027 SEC-C motif ABE28_022390 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily ABE28_022390 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_022390 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_022390 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain ABE28_022400 IPR036567 Ribosome hibernation promotion factor-like ABE28_022400 IPR003489 Ribosome hibernation promoting factor/RaiA ABE28_022400 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal ABE28_022400 IPR034694 Ribosome hibernation promoting factor, long/plastid ABE28_022400 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily ABE28_022410 IPR003713 Flagellar protein FliS ABE28_022410 IPR036584 Flagellar protein FliS superfamily ABE28_022415 IPR010810 Flagellin hook, IN motif ABE28_022415 IPR040026 Flagellar hook-associated protein 2 ABE28_022415 IPR010809 Flagellar hook-associated protein 2, C-terminal ABE28_022415 IPR003481 Flagellar hook-associated protein 2, N-terminal ABE28_022420 IPR005186 FlaG protein ABE28_022420 IPR035924 FlaG-like superfamily ABE28_022430 IPR042187 Flagellin, C-terminal domain, subdomain 2 ABE28_022430 IPR001492 Flagellin ABE28_022430 IPR001029 Flagellin, D0/D1 domain ABE28_022435 IPR003751 Translational regulator CsrA ABE28_022435 IPR036107 Carbon storage regulator superfamily ABE28_022440 IPR003775 Flagellar assembly factor FliW ABE28_022440 IPR024046 Flagellar assembly factor FliW domain superfamily ABE28_022450 IPR013384 Flagellar hook-associated protein 3 ABE28_022450 IPR001029 Flagellin, D0/D1 domain ABE28_022455 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_022455 IPR019776 Flagellar basal body rod protein, conserved site ABE28_022455 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022455 IPR002371 Flagellar hook-associated protein 1 ABE28_022465 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ABE28_022465 IPR007412 Anti-sigma-28 factor, FlgM ABE28_022465 IPR035890 Anti-sigma-28 factor FlgM superfamily ABE28_022470 IPR022258 Flagellar operon protein YvyF ABE28_022475 IPR005222 Competence protein ComF ABE28_022475 IPR029057 Phosphoribosyltransferase-like ABE28_022475 IPR000836 Phosphoribosyltransferase domain ABE28_022485 IPR003797 DegV ABE28_022490 IPR000792 Transcription regulator LuxR, C-terminal ABE28_022490 IPR011006 CheY-like superfamily ABE28_022490 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_022490 IPR001789 Signal transduction response regulator, receiver domain ABE28_022495 IPR005467 Histidine kinase domain ABE28_022495 IPR016381 Signal transduction histidine kinase, DegS ABE28_022495 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_022495 IPR008595 Sensor DegS ABE28_022495 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain ABE28_022495 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_022500 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ABE28_022500 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_022500 IPR036956 Impact, N-terminal domain superfamily ABE28_022500 IPR001498 Impact, N-terminal ABE28_022500 IPR015796 Impact family, bacterial/archaeal ABE28_022500 IPR023582 Impact family ABE28_022500 IPR035647 EF-G domain III/V-like ABE28_022500 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site ABE28_022505 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_022510 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site ABE28_022510 IPR000715 Glycosyl transferase, family 4 ABE28_022515 IPR001296 Glycosyl transferase, family 1 ABE28_022515 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ABE28_022520 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase ABE28_022520 IPR004629 Glycosyl transferase WecB/TagA/CpsF ABE28_022530 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022535 IPR017814 Mycothiol biosynthesis protein, MshA ABE28_022535 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain ABE28_022535 IPR001296 Glycosyl transferase, family 1 ABE28_022540 IPR003646 SH3-like domain, bacterial-type ABE28_022540 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022540 IPR015860 ABC transporter, teichoic acids export, TagH ABE28_022540 IPR017871 ABC transporter, conserved site ABE28_022540 IPR003439 ABC transporter-like ABE28_022540 IPR003593 AAA+ ATPase domain ABE28_022545 IPR013525 ABC-2 type transporter ABE28_022545 IPR000412 ABC-2 transporter ABE28_022550 IPR007554 CDP-glycerol glycerophosphotransferase ABE28_022555 IPR007554 CDP-glycerol glycerophosphotransferase ABE28_022560 IPR004821 Cytidyltransferase-like domain ABE28_022560 IPR006409 Glycerol-3-phosphate cytidylyltransferase ABE28_022560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_022565 IPR007554 CDP-glycerol glycerophosphotransferase ABE28_022570 IPR038765 Papain-like cysteine peptidase superfamily ABE28_022570 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_022570 IPR018392 LysM domain ABE28_022570 IPR036779 LysM domain superfamily ABE28_022580 IPR000917 Sulfatase, N-terminal ABE28_022580 IPR012160 Lipoteichoic acid synthase-like ABE28_022580 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_022590 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022590 IPR020937 SecA conserved site ABE28_022590 IPR000185 Protein translocase subunit SecA ABE28_022590 IPR014018 SecA motor DEAD ABE28_022590 IPR036670 SecA, preprotein cross-linking domain superfamily ABE28_022590 IPR011130 SecA, preprotein cross-linking domain ABE28_022590 IPR011116 SecA Wing/Scaffold ABE28_022590 IPR036266 SecA, Wing/Scaffold superfamily ABE28_022590 IPR030908 Protein translocase subunit SecA 2, Bacillus anthracis-type ABE28_022590 IPR011115 SecA DEAD-like, N-terminal ABE28_022595 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_022595 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_022595 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_022595 IPR023908 xxxLxxG heptad repeat ABE28_022595 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_022595 IPR023908 xxxLxxG heptad repeat ABE28_022600 IPR001952 Alkaline phosphatase ABE28_022600 IPR018299 Alkaline phosphatase, active site ABE28_022600 IPR017850 Alkaline-phosphatase-like, core domain superfamily ABE28_022605 IPR007253 Putative cell wall binding repeat 2 ABE28_022605 IPR013486 Sporulation stage II protein D, amidase enhancer LytB ABE28_022605 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_022610 IPR036138 Penicillin-binding protein, dimerisation domain superfamily ABE28_022610 IPR005311 Penicillin-binding protein, dimerisation domain ABE28_022610 IPR007887 NTF2-like N-terminal transpeptidase ABE28_022610 IPR012338 Beta-lactamase/transpeptidase-like ABE28_022610 IPR032710 NTF2-like domain superfamily ABE28_022610 IPR001460 Penicillin-binding protein, transpeptidase ABE28_022630 IPR007527 Zinc finger, SWIM-type ABE28_022635 IPR001650 Helicase, C-terminal ABE28_022635 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_022635 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_022635 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022635 IPR000330 SNF2-related, N-terminal domain ABE28_022635 IPR022138 Helicase SWF/SNF-related ABE28_022640 IPR001123 Amino acid exporter protein, LeuE-type ABE28_022645 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022645 IPR000524 Transcription regulator HTH, GntR ABE28_022645 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_022645 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_022645 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_022645 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022645 IPR004839 Aminotransferase, class I/classII ABE28_022660 IPR034216 C5a peptidase-like domain ABE28_022660 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_022660 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_022660 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_022660 IPR010435 Fn3-like domain ABE28_022660 IPR019948 Gram-positive LPXTG cell wall anchor ABE28_022660 IPR013783 Immunoglobulin-like fold ABE28_022660 IPR000209 Peptidase S8/S53 domain ABE28_022660 IPR036852 Peptidase S8/S53 domain superfamily ABE28_022660 IPR003137 PA domain ABE28_022660 IPR019931 LPXTG cell wall anchor domain ABE28_022660 IPR015500 Peptidase S8, subtilisin-related ABE28_022675 IPR023765 Solute-binding protein family 5, conserved site ABE28_022675 IPR039424 Solute-binding protein family 5 ABE28_022675 IPR030678 Peptide/nickel binding protein, MppA-type ABE28_022675 IPR000914 Solute-binding protein family 5 domain ABE28_022680 IPR003439 ABC transporter-like ABE28_022680 IPR017871 ABC transporter, conserved site ABE28_022680 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_022680 IPR003593 AAA+ ATPase domain ABE28_022680 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022685 IPR003593 AAA+ ATPase domain ABE28_022685 IPR017871 ABC transporter, conserved site ABE28_022685 IPR003439 ABC transporter-like ABE28_022685 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022685 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal ABE28_022695 IPR012340 Nucleic acid-binding, OB-fold ABE28_022695 IPR000424 Primosome PriB/single-strand DNA-binding ABE28_022695 IPR011344 Single-stranded DNA-binding protein ABE28_022710 IPR029069 HotDog domain superfamily ABE28_022710 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ ABE28_022710 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ ABE28_022720 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022720 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_022720 IPR019776 Flagellar basal body rod protein, conserved site ABE28_022720 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABE28_022720 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_022725 IPR001444 Flagellar basal body rod protein, N-terminal ABE28_022725 IPR019776 Flagellar basal body rod protein, conserved site ABE28_022725 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_022725 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022730 IPR004753 Cell shape determining protein MreB ABE28_022735 IPR018356 Transcription regulator, HTH DeoR-type, conserved site ABE28_022735 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID ABE28_022740 IPR016047 Peptidase M23 ABE28_022740 IPR011055 Duplicated hybrid motif ABE28_022750 IPR013486 Sporulation stage II protein D, amidase enhancer LytB ABE28_022750 IPR014225 Sporulation stage II, protein D firmicutes ABE28_022750 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_022755 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ABE28_022755 IPR001986 Enolpyruvate transferase domain ABE28_022755 IPR036968 Enolpyruvate transferase domain superfamily ABE28_022755 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase ABE28_022765 IPR009526 Protein of unknown function DUF1146 ABE28_022770 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ABE28_022770 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 ABE28_022775 IPR003918 NADH:ubiquinone oxidoreductase ABE28_022775 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ABE28_022775 IPR022997 NADH-quinone oxidoreductase chain 4 ABE28_022775 IPR010227 NADH-quinone oxidoreductase, chain M/4 ABE28_022780 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit ABE28_022780 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal ABE28_022780 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup ABE28_022780 IPR002128 NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal ABE28_022780 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 ABE28_022785 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABE28_022785 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K ABE28_022790 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 ABE28_022790 IPR042106 NADH-ubiquinone/plastoquinone oxidoreductase chain 6, subunit NuoJ ABE28_022795 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_022795 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_022795 IPR010226 NADH-quinone oxidoreductase, chain I ABE28_022800 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site ABE28_022800 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H ABE28_022805 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily ABE28_022805 IPR029014 [NiFe]-hydrogenase, large subunit ABE28_022805 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H ABE28_022805 IPR001135 NADH-quinone oxidoreductase, subunit D ABE28_022810 IPR020396 NADH:ubiquinone oxidoreductase, 30kDa subunit, conserved site ABE28_022810 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit ABE28_022810 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily ABE28_022810 IPR010218 NADH dehydrogenase, subunit C ABE28_022815 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit ABE28_022815 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit ABE28_022820 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 ABE28_022820 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid ABE28_022820 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily ABE28_022825 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit ABE28_022825 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily ABE28_022825 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal ABE28_022825 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain ABE28_022825 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal ABE28_022830 IPR003593 AAA+ ATPase domain ABE28_022830 IPR005722 ATP synthase, F1 complex, beta subunit ABE28_022830 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ABE28_022830 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal ABE28_022830 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ABE28_022830 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ABE28_022830 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022830 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ABE28_022835 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site ABE28_022835 IPR000131 ATP synthase, F1 complex, gamma subunit ABE28_022835 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily ABE28_022840 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site ABE28_022840 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily ABE28_022840 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily ABE28_022840 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain ABE28_022840 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain ABE28_022840 IPR000793 ATP synthase, alpha subunit, C-terminal ABE28_022840 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily ABE28_022840 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022840 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ABE28_022840 IPR005294 ATP synthase, F1 complex, alpha subunit ABE28_022845 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily ABE28_022845 IPR020781 ATPase, OSCP/delta subunit, conserved site ABE28_022845 IPR000711 ATPase, OSCP/delta subunit ABE28_022850 IPR005864 ATP synthase, F0 complex, subunit b, bacterial ABE28_022850 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast ABE28_022850 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ABE28_022855 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast ABE28_022855 IPR000454 ATP synthase, F0 complex, subunit C ABE28_022855 IPR035921 F/V-ATP synthase subunit C superfamily ABE28_022855 IPR002379 V-ATPase proteolipid subunit C-like domain ABE28_022855 IPR038662 F1F0 ATP synthase subunit C superfamily ABE28_022855 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site ABE28_022860 IPR000568 ATP synthase, F0 complex, subunit A ABE28_022860 IPR023011 ATP synthase, F0 complex, subunit A, active site ABE28_022860 IPR035908 ATP synthase, F0 complex, subunit A superfamily ABE28_022865 IPR005598 ATP synthase protein I ABE28_022865 IPR039072 ATP synthase protein I, Bacilli-type ABE28_022870 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_022870 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_022870 IPR036852 Peptidase S8/S53 domain superfamily ABE28_022870 IPR000209 Peptidase S8/S53 domain ABE28_022870 IPR025965 FlgD Ig-like domain ABE28_022870 IPR003137 PA domain ABE28_022870 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 ABE28_022870 IPR015500 Peptidase S8, subtilisin-related ABE28_022870 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_022870 IPR034213 Vpr-like peptidase, catalytic domain ABE28_022870 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily ABE28_022875 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like ABE28_022875 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain ABE28_022880 IPR000836 Phosphoribosyltransferase domain ABE28_022880 IPR034332 Uracil phosphoribosyltransferase, bacterial-type ABE28_022880 IPR005765 Uracil phosphoribosyl transferase ABE28_022880 IPR029057 Phosphoribosyltransferase-like ABE28_022885 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_022885 IPR039429 Serine hydroxymethyltransferase-like domain ABE28_022885 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site ABE28_022885 IPR001085 Serine hydroxymethyltransferase ABE28_022885 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_022885 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_022890 IPR006340 Protein of unknown function DUF436 ABE28_022890 IPR028345 Aminoglycoside 3-N-acetyltransferase-like ABE28_022895 IPR004785 Ribose 5-phosphate isomerase B ABE28_022895 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily ABE28_022895 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family ABE28_022900 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding ABE28_022900 IPR029151 Periplasmic sensor-like domain superfamily ABE28_022900 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain ABE28_022900 IPR003660 HAMP domain ABE28_022900 IPR033479 Double Cache domain 1 ABE28_022905 IPR017867 Protein-tyrosine phosphatase, low molecular weight ABE28_022905 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABE28_022905 IPR023485 Phosphotyrosine protein phosphatase I ABE28_022910 IPR022929 Putative manganese efflux pump MntP ABE28_022910 IPR003810 Putative manganese efflux pump ABE28_022915 IPR006070 YrdC-like domain ABE28_022915 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 ABE28_022915 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily ABE28_022915 IPR005145 Putative GTP-binding controlling metal-binding domain ABE28_022915 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABE28_022920 IPR014202 Sporulation stage II, protein R ABE28_022925 IPR004556 Methyltransferase HemK-like ABE28_022925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ABE28_022925 IPR025714 Methyltransferase domain ABE28_022925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_022925 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific ABE28_022925 IPR040758 Release factor glutamine methyltransferase, N-terminal domain ABE28_022930 IPR000352 Peptide chain release factor class I ABE28_022930 IPR004373 Peptide chain release factor 1 ABE28_022930 IPR005139 Peptide chain release factor ABE28_022940 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022940 IPR020633 Thymidine kinase, conserved site ABE28_022940 IPR001267 Thymidine kinase ABE28_022950 IPR041703 Transcription termination factor Rho, ATP binding domain ABE28_022950 IPR012340 Nucleic acid-binding, OB-fold ABE28_022950 IPR003593 AAA+ ATPase domain ABE28_022950 IPR011112 Rho termination factor, N-terminal ABE28_022950 IPR011129 Cold shock domain ABE28_022950 IPR011113 Rho termination factor, RNA-binding domain ABE28_022950 IPR004665 Transcription termination factor Rho ABE28_022950 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022950 IPR036269 Rho termination factor, N-terminal domain superfamily ABE28_022950 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain ABE28_022955 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase ABE28_022960 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase ABE28_022960 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta ABE28_022960 IPR036968 Enolpyruvate transferase domain superfamily ABE28_022960 IPR001986 Enolpyruvate transferase domain ABE28_022965 IPR018225 Transaldolase, active site ABE28_022965 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase ABE28_022965 IPR022999 Transaldolase type 3B, putative ABE28_022965 IPR001585 Transaldolase/Fructose-6-phosphate aldolase ABE28_022965 IPR013785 Aldolase-type TIM barrel ABE28_022965 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial ABE28_022970 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 ABE28_022970 IPR000771 Fructose-bisphosphate aldolase, class-II ABE28_022970 IPR013785 Aldolase-type TIM barrel ABE28_022975 IPR001789 Signal transduction response regulator, receiver domain ABE28_022975 IPR011006 CheY-like superfamily ABE28_022980 IPR019676 Domain of unknown function (DUF2529) ABE28_022985 IPR029062 Class I glutamine amidotransferase-like ABE28_022985 IPR004468 CTP synthase ABE28_022985 IPR017456 CTP synthase, N-terminal ABE28_022985 IPR017926 Glutamine amidotransferase ABE28_022985 IPR033828 CTP synthase GATase domain ABE28_022985 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022990 IPR029757 DNA-directed RNA polymerase subunit delta ABE28_022990 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily ABE28_022990 IPR007759 HB1/Asxl, restriction endonuclease HTH domain ABE28_022995 IPR006159 Methylmalonyl-CoA mutase, C-terminal ABE28_022995 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic ABE28_022995 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic ABE28_022995 IPR006158 Cobalamin (vitamin B12)-binding domain ABE28_022995 IPR036724 Cobalamin-binding domain superfamily ABE28_022995 IPR033669 Fused isobutyryl-CoA mutase ABE28_022995 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023005 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_023005 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_023005 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_023005 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_023005 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_023005 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_023005 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_023010 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily ABE28_023010 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily ABE28_023010 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal ABE28_023010 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal ABE28_023010 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal ABE28_023010 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain ABE28_023010 IPR006089 Acyl-CoA dehydrogenase, conserved site ABE28_023015 IPR013328 6-phosphogluconate dehydrogenase, domain 2 ABE28_023015 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily ABE28_023015 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal ABE28_023015 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding ABE28_023015 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site ABE28_023015 IPR022694 3-hydroxyacyl-CoA dehydrogenase ABE28_023015 IPR036291 NAD(P)-binding domain superfamily ABE28_023020 IPR020615 Thiolase, acyl-enzyme intermediate active site ABE28_023020 IPR020610 Thiolase, active site ABE28_023020 IPR020617 Thiolase, C-terminal ABE28_023020 IPR020613 Thiolase, conserved site ABE28_023020 IPR020616 Thiolase, N-terminal ABE28_023020 IPR016039 Thiolase-like ABE28_023020 IPR002155 Thiolase ABE28_023025 IPR004017 Cysteine-rich domain ABE28_023025 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_023025 IPR009051 Alpha-helical ferredoxin ABE28_023025 IPR036197 NarG-like superfamily ABE28_023025 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_023030 IPR022924 Cardiolipin synthase ABE28_023030 IPR001736 Phospholipase D/Transphosphatidylase ABE28_023030 IPR025202 Phospholipase D-like domain ABE28_023035 IPR036237 Xylose isomerase-like superfamily ABE28_023035 IPR023520 UV-endonuclease UvdE, bacterial ABE28_023035 IPR004601 UV-endonuclease UvdE ABE28_023040 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding ABE28_023040 IPR001278 Arginine-tRNA ligase ABE28_023040 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_023040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_023040 IPR008909 DALR anticodon binding ABE28_023040 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily ABE28_023040 IPR035684 Arginyl-tRNA synthetase, catalytic core domain ABE28_023040 IPR005148 Arginyl tRNA synthetase N-terminal domain ABE28_023045 IPR015231 Protein of unknown function DUF1934 ABE28_023045 IPR012674 Calycin ABE28_023050 IPR020855 Ureohydrolase, manganese-binding site ABE28_023050 IPR006035 Ureohydrolase ABE28_023050 IPR023696 Ureohydrolase domain superfamily ABE28_023050 IPR005925 Agmatinase-related ABE28_023055 IPR037163 Spermidine synthase, tetramerisation domain superfamily ABE28_023055 IPR030374 Polyamine biosynthesis domain ABE28_023055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023055 IPR030373 Polyamine biosynthesis domain, conserved site ABE28_023055 IPR035246 Spermidine synthase, tetramerisation domain ABE28_023055 IPR001045 Spermidine/spermine synthases ABE28_023060 IPR023346 Lysozyme-like domain superfamily ABE28_023060 IPR001460 Penicillin-binding protein, transpeptidase ABE28_023060 IPR036950 Penicillin binding protein transglycosylase domain ABE28_023060 IPR001264 Glycosyl transferase, family 51 ABE28_023060 IPR012338 Beta-lactamase/transpeptidase-like ABE28_023065 IPR014852 Uncharacterised protein YwhD ABE28_023070 IPR008915 Peptidase M50 ABE28_023075 IPR014347 Tautomerase/MIF superfamily ABE28_023075 IPR004370 4-oxalocrotonate tautomerase ABE28_023075 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type ABE28_023085 IPR003607 HD/PDEase domain ABE28_023085 IPR006674 HD domain ABE28_023090 IPR020880 Protein of unknown function UPF0741 ABE28_023090 IPR009910 Protein of unknown function DUF1450 ABE28_023095 IPR017877 Myb-like domain ABE28_023095 IPR014243 Transcription factor, RsfA ABE28_023100 IPR024897 Octanoyltransferase LipL ABE28_023100 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain ABE28_023105 IPR002505 Phosphate acetyl/butaryl transferase ABE28_023105 IPR042112 Phosphate acetyltransferase, domain 2 ABE28_023105 IPR042113 Phosphate acetyltransferase, domain 1 ABE28_023105 IPR004614 Phosphate acetyltransferase ABE28_023105 IPR012147 Phosphate acetyl/butyryltransferase ABE28_023115 IPR014099 Spore coat protein GerQ ABE28_023120 IPR006696 Protein of unknown function DUF423 ABE28_023130 IPR002043 Uracil-DNA glycosylase family 1 ABE28_023130 IPR018085 Uracil-DNA glycosylase, active site ABE28_023130 IPR036895 Uracil-DNA glycosylase-like domain superfamily ABE28_023130 IPR005122 Uracil-DNA glycosylase-like ABE28_023140 IPR025889 General stress protein 17M-like domain ABE28_023145 IPR000594 THIF-type NAD/FAD binding fold ABE28_023145 IPR035985 Ubiquitin-activating enzyme ABE28_023150 IPR003749 Sulfur carrier ThiS/MoaD-like ABE28_023150 IPR012675 Beta-grasp domain superfamily ABE28_023150 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_023155 IPR003448 Molybdopterin biosynthesis MoaE ABE28_023155 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily ABE28_023160 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_023160 IPR013482 Molybdenum cofactor guanylyltransferase ABE28_023160 IPR025877 MobA-like NTP transferase ABE28_023165 IPR029056 Ribokinase-like ABE28_023165 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase ABE28_023165 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase ABE28_023170 IPR014934 Protein of unknown function DUF1806 ABE28_023170 IPR036492 Hypothetical protein YojF superfamily ABE28_023175 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related ABE28_023175 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 ABE28_023175 IPR024078 Putative deacetylase LmbE-like domain superfamily ABE28_023180 IPR036259 MFS transporter superfamily ABE28_023180 IPR020846 Major facilitator superfamily domain ABE28_023180 IPR011701 Major facilitator superfamily ABE28_023185 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023185 IPR036390 Winged helix DNA-binding domain superfamily ABE28_023185 IPR000835 MarR-type HTH domain ABE28_023190 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase ABE28_023190 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_023190 IPR019893 PQQ-dependent dehydrogenase, s-GDH family ABE28_023190 IPR012938 Glucose/Sorbosone dehydrogenase ABE28_023195 IPR036412 HAD-like superfamily ABE28_023195 IPR000150 Cof family ABE28_023195 IPR006379 HAD-superfamily hydrolase, subfamily IIB ABE28_023195 IPR023214 HAD superfamily ABE28_023205 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABE28_023205 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain ABE28_023205 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily ABE28_023210 IPR006002 Gluconate kinase ABE28_023210 IPR000577 Carbohydrate kinase, FGGY ABE28_023210 IPR018485 Carbohydrate kinase, FGGY, C-terminal ABE28_023210 IPR018483 Carbohydrate kinase, FGGY, conserved site ABE28_023210 IPR018484 Carbohydrate kinase, FGGY, N-terminal ABE28_023225 IPR016030 Cobalamin adenosyltransferase-like ABE28_023225 IPR036451 Cobalamin adenosyltransferase-like superfamily ABE28_023225 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type ABE28_023240 IPR003805 Adenosylcobinamide-GDP ribazoletransferase ABE28_023250 IPR004839 Aminotransferase, class I/classII ABE28_023250 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_023250 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site ABE28_023250 IPR005860 L-threonine-O-3-phosphate decarboxylase ABE28_023250 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023250 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_023255 IPR004485 Cobalamin biosynthesis CobD/CbiB ABE28_023260 IPR003593 AAA+ ATPase domain ABE28_023260 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023260 IPR003439 ABC transporter-like ABE28_023265 IPR000522 ABC transporter, permease protein, BtuC-like ABE28_023265 IPR037294 ABC transporter, BtuC-like ABE28_023270 IPR002491 ABC transporter periplasmic binding domain ABE28_023275 IPR002509 NodB homology domain ABE28_023275 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel ABE28_023290 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABE28_023290 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABE28_023290 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABE28_023290 IPR003602 DNA topoisomerase, type IA, DNA-binding domain ABE28_023290 IPR005738 DNA topoisomerase III ABE28_023290 IPR006171 TOPRIM domain ABE28_023290 IPR034144 DNA topoisomerase 3-like, TOPRIM domain ABE28_023290 IPR023405 DNA topoisomerase, type IA, core domain ABE28_023290 IPR013497 DNA topoisomerase, type IA, central ABE28_023290 IPR003601 DNA topoisomerase, type IA, domain 2 ABE28_023290 IPR000380 DNA topoisomerase, type IA ABE28_023290 IPR023406 DNA topoisomerase, type IA, active site ABE28_023300 IPR017871 ABC transporter, conserved site ABE28_023300 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023300 IPR003593 AAA+ ATPase domain ABE28_023300 IPR003439 ABC transporter-like ABE28_023315 IPR024295 Protein of unknown function DUF2705 ABE28_023325 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023325 IPR003593 AAA+ ATPase domain ABE28_023325 IPR032781 ABC-transporter extension domain ABE28_023325 IPR003439 ABC transporter-like ABE28_023325 IPR017871 ABC transporter, conserved site ABE28_023345 IPR011545 DEAD/DEAH box helicase domain ABE28_023345 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_023345 IPR001650 Helicase, C-terminal ABE28_023345 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023345 IPR014014 RNA helicase, DEAD-box type, Q motif ABE28_023350 IPR026033 Azaguanine-like transporters ABE28_023350 IPR006043 Xanthine/uracil/vitamin C permease ABE28_023365 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023365 IPR005805 Rieske iron-sulphur protein, C-terminal ABE28_023365 IPR038010 YhfW, C-terminal Rieske domain ABE28_023365 IPR006076 FAD dependent oxidoreductase ABE28_023365 IPR017941 Rieske [2Fe-2S] iron-sulphur domain ABE28_023365 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily ABE28_023370 IPR019240 Protein of unknown function DUF2196 ABE28_023375 IPR007497 Protein of unknown function DUF541 ABE28_023380 IPR002376 Formyl transferase, N-terminal ABE28_023380 IPR036477 Formyl transferase, N-terminal domain superfamily ABE28_023380 IPR002912 ACT domain ABE28_023380 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain ABE28_023380 IPR004810 Formyltetrahydrofolate deformylase ABE28_023400 IPR018313 Solute-binding protein family 3, conserved site ABE28_023400 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_023410 IPR017871 ABC transporter, conserved site ABE28_023410 IPR003593 AAA+ ATPase domain ABE28_023410 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type ABE28_023410 IPR003439 ABC transporter-like ABE28_023410 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023415 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily ABE28_023415 IPR004514 Glutamine-tRNA synthetase ABE28_023415 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal ABE28_023415 IPR022861 Glutamine-tRNA ligase, bacterial ABE28_023415 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain ABE28_023415 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site ABE28_023415 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain ABE28_023415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_023415 IPR000924 Glutamyl/glutaminyl-tRNA synthetase ABE28_023415 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily ABE28_023420 IPR036513 STAS domain superfamily ABE28_023420 IPR002645 STAS domain ABE28_023420 IPR025751 RsbT co-antagonist protein RsbRD, N-terminal domain ABE28_023425 IPR011057 Mss4-like superfamily ABE28_023425 IPR002579 Peptide methionine sulphoxide reductase MrsB ABE28_023425 IPR028427 Peptide methionine sulfoxide reductase ABE28_023425 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily ABE28_023425 IPR002569 Peptide methionine sulphoxide reductase MsrA ABE28_023430 IPR002668 Concentrative nucleoside transporter N-terminal domain ABE28_023430 IPR011657 Concentrative nucleoside transporter C-terminal domain ABE28_023430 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial ABE28_023430 IPR008276 Concentrative nucleoside transporter ABE28_023440 IPR041610 ArlS, sensor domain ABE28_023440 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_023440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_023440 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023440 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023440 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_023440 IPR003660 HAMP domain ABE28_023440 IPR005467 Histidine kinase domain ABE28_023445 IPR011006 CheY-like superfamily ABE28_023445 IPR001789 Signal transduction response regulator, receiver domain ABE28_023445 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023445 IPR039420 Transcriptional regulatory protein WalR-like ABE28_023445 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_023450 IPR017911 ABC transporter, macrolide export, ATP-binding domain ABE28_023450 IPR003593 AAA+ ATPase domain ABE28_023450 IPR017871 ABC transporter, conserved site ABE28_023450 IPR003439 ABC transporter-like ABE28_023450 IPR003838 ABC transporter permease protein domain ABE28_023450 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023450 IPR025857 MacB-like periplasmic core domain ABE28_023455 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023455 IPR003593 AAA+ ATPase domain ABE28_023455 IPR003439 ABC transporter-like ABE28_023455 IPR017871 ABC transporter, conserved site ABE28_023470 IPR007436 Protein of unknown function DUF485 ABE28_023475 IPR038377 Sodium/glucose symporter superfamily ABE28_023475 IPR018212 Sodium/solute symporter, conserved site ABE28_023475 IPR001734 Sodium/solute symporter ABE28_023500 IPR029058 Alpha/Beta hydrolase fold ABE28_023500 IPR000073 Alpha/beta hydrolase fold-1 ABE28_023505 IPR036458 Sodium:dicarboxylate symporter superfamily ABE28_023505 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_023505 IPR001991 Sodium:dicarboxylate symporter ABE28_023505 IPR023954 C4-dicarboxylate transport protein ABE28_023515 IPR015947 PUA-like superfamily ABE28_023515 IPR002478 PUA domain ABE28_023515 IPR036974 PUA domain superfamily ABE28_023515 IPR041532 RlmI, PUA-like domain ABE28_023515 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023515 IPR019614 S-adenosylmethionine-dependent methyltransferase ABE28_023525 IPR033524 Leu/Phe/Val dehydrogenases active site ABE28_023525 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal ABE28_023525 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase ABE28_023525 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain ABE28_023525 IPR014362 Glutamate dehydrogenase ABE28_023525 IPR033922 NAD(P) binding domain of glutamate dehydrogenase ABE28_023525 IPR036291 NAD(P)-binding domain superfamily ABE28_023530 IPR028082 Periplasmic binding protein-like I ABE28_023530 IPR025997 Periplasmic binding protein ABE28_023535 IPR001851 ABC transporter, permease ABE28_023540 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023540 IPR015861 ABC transporter, ribose import, RbsA ABE28_023540 IPR017871 ABC transporter, conserved site ABE28_023540 IPR003593 AAA+ ATPase domain ABE28_023540 IPR003439 ABC transporter-like ABE28_023545 IPR023750 RbsD-like superfamily ABE28_023545 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU ABE28_023545 IPR023064 D-ribose pyranase ABE28_023550 IPR011611 Carbohydrate kinase PfkB ABE28_023550 IPR011877 Ribokinase ABE28_023550 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site ABE28_023550 IPR002139 Ribokinase/fructokinase ABE28_023550 IPR029056 Ribokinase-like ABE28_023555 IPR028082 Periplasmic binding protein-like I ABE28_023555 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_023555 IPR000843 LacI-type HTH domain ABE28_023560 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal ABE28_023560 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like ABE28_023560 IPR022770 Ferric iron reductase FhuF domain ABE28_023565 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ABE28_023565 IPR031043 Putative histamine N-monooxygenase ABE28_023565 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023570 IPR019432 Siderophore biosynthesis protein, conserved domain ABE28_023570 IPR016181 Acyl-CoA N-acyltransferase ABE28_023575 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like ABE28_023575 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal ABE28_023575 IPR022770 Ferric iron reductase FhuF domain ABE28_023580 IPR002129 Pyridoxal phosphate-dependent decarboxylase ABE28_023580 IPR021115 Pyridoxal-phosphate binding site ABE28_023580 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_023580 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023585 IPR005814 Aminotransferase class-III ABE28_023585 IPR004637 2,4-diaminobutyrate 4-transaminase ABE28_023585 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023585 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 ABE28_023585 IPR015421 Pyridoxal phosphate-dependent transferase, major domain ABE28_023600 IPR014867 Spore coat protein CotH ABE28_023605 IPR017853 Glycoside hydrolase superfamily ABE28_023605 IPR015237 Alpha-amylase C-terminal, prokaryotic ABE28_023605 IPR006046 Alpha amylase ABE28_023605 IPR006047 Glycosyl hydrolase, family 13, catalytic domain ABE28_023605 IPR013776 Alpha-amylase, thermostable ABE28_023605 IPR013780 Glycosyl hydrolase, all-beta ABE28_023610 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site ABE28_023610 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_023610 IPR002933 Peptidase M20 ABE28_023610 IPR010161 Peptidase M20B, tripeptide aminopeptidase ABE28_023610 IPR011650 Peptidase M20, dimerisation domain ABE28_023615 IPR020835 Catalase superfamily ABE28_023615 IPR018028 Catalase, mono-functional, haem-containing ABE28_023615 IPR024708 Catalase active site ABE28_023615 IPR024712 Catalase, mono-functional, haem-containing, clade 2 ABE28_023615 IPR011614 Catalase core domain ABE28_023615 IPR037060 Catalase core domain superfamily ABE28_023615 IPR002226 Catalase haem-binding site ABE28_023615 IPR041399 Large catalase, C-terminal domain ABE28_023615 IPR029062 Class I glutamine amidotransferase-like ABE28_023615 IPR010582 Catalase immune-responsive domain ABE28_023620 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ABE28_023620 IPR014014 RNA helicase, DEAD-box type, Q motif ABE28_023620 IPR011545 DEAD/DEAH box helicase domain ABE28_023620 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_023620 IPR001650 Helicase, C-terminal ABE28_023620 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_023620 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023620 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABE28_023620 IPR028619 ATP-dependent RNA helicase DbpA ABE28_023625 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_023625 IPR011008 Dimeric alpha-beta barrel ABE28_023625 IPR023953 Heme oxygenase IsdG ABE28_023630 IPR013785 Aldolase-type TIM barrel ABE28_023630 IPR006638 Elp3/MiaB/NifB ABE28_023630 IPR007197 Radical SAM ABE28_023630 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr ABE28_023630 IPR040072 Methyltransferase (Class A) ABE28_023630 IPR027492 Dual-specificity RNA methyltransferase RlmN ABE28_023635 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_023635 IPR029028 Alpha/beta knot methyltransferases ABE28_023635 IPR003742 RNA methyltransferase RlmH ABE28_023640 IPR001940 Peptidase S1C ABE28_023640 IPR009003 Peptidase S1, PA clan ABE28_023640 IPR036034 PDZ superfamily ABE28_023640 IPR001478 PDZ domain ABE28_023645 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_023645 IPR001279 Metallo-beta-lactamase ABE28_023650 IPR018604 Regulatory protein YycH-like ABE28_023650 IPR042274 Regulatory protein YycH/YycI , domain 2 ABE28_023660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal ABE28_023660 IPR035965 PAS domain superfamily ABE28_023660 IPR000014 PAS domain ABE28_023660 IPR001610 PAC motif ABE28_023660 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023660 IPR000700 PAS-associated, C-terminal ABE28_023660 IPR005467 Histidine kinase domain ABE28_023660 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily ABE28_023660 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain ABE28_023660 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023660 IPR003660 HAMP domain ABE28_023665 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023665 IPR039420 Transcriptional regulatory protein WalR-like ABE28_023665 IPR001789 Signal transduction response regulator, receiver domain ABE28_023665 IPR011006 CheY-like superfamily ABE28_023665 IPR016032 Signal transduction response regulator, C-terminal effector ABE28_023665 IPR001867 OmpR/PhoB-type DNA-binding domain ABE28_023670 IPR023346 Lysozyme-like domain superfamily ABE28_023670 IPR011055 Duplicated hybrid motif ABE28_023670 IPR016047 Peptidase M23 ABE28_023670 IPR010090 Phage tail tape measure protein ABE28_023670 IPR000189 Prokaryotic transglycosylase, active site ABE28_023670 IPR008258 Transglycosylase SLT domain 1 ABE28_023695 IPR033128 Adenylosuccinate synthase, active site ABE28_023695 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023695 IPR042109 Adenylosuccinate synthetase, domain 1 ABE28_023695 IPR042111 Adenylosuccinate synthetase, domain 3 ABE28_023695 IPR042110 Adenylosuccinate synthetase, domain 2 ABE28_023695 IPR018220 Adenylosuccinate synthase, GTP-binding site ABE28_023695 IPR001114 Adenylosuccinate synthetase ABE28_023700 IPR007693 DNA helicase, DnaB-like, N-terminal ABE28_023700 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023700 IPR003593 AAA+ ATPase domain ABE28_023700 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily ABE28_023700 IPR007692 DNA helicase, DnaB type ABE28_023700 IPR007694 DNA helicase, DnaB-like, C-terminal ABE28_023700 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_023705 IPR036935 Ribosomal protein L9, N-terminal domain superfamily ABE28_023705 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABE28_023705 IPR020069 Ribosomal protein L9, C-terminal ABE28_023705 IPR020070 Ribosomal protein L9, N-terminal ABE28_023705 IPR000244 Ribosomal protein L9 ABE28_023705 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ABE28_023705 IPR020594 Ribosomal protein L9, bacteria/chloroplast ABE28_023710 IPR003156 DHHA1 domain ABE28_023710 IPR001667 DDH domain ABE28_023710 IPR000160 GGDEF domain ABE28_023710 IPR038763 DHH phosphoesterase superfamily ABE28_023710 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA ABE28_023720 IPR036870 Ribosomal protein S18 superfamily ABE28_023720 IPR001648 Ribosomal protein S18 ABE28_023720 IPR018275 Ribosomal protein S18, conserved site ABE28_023725 IPR011344 Single-stranded DNA-binding protein ABE28_023725 IPR000424 Primosome PriB/single-strand DNA-binding ABE28_023725 IPR012340 Nucleic acid-binding, OB-fold ABE28_023730 IPR020815 Ribosomal protein S6, conserved site ABE28_023730 IPR035980 Ribosomal protein S6 superfamily ABE28_023730 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ABE28_023730 IPR000529 Ribosomal protein S6 ABE28_023730 IPR020814 Ribosomal protein S6, plastid/chloroplast ABE28_023735 IPR013029 YchF, C-terminal domain ABE28_023735 IPR004095 TGS ABE28_023735 IPR012676 TGS-like ABE28_023735 IPR041706 YchF, N-terminal ABE28_023735 IPR023192 TGS-like domain superfamily ABE28_023735 IPR006073 GTP binding domain ABE28_023735 IPR031167 OBG-type guanine nucleotide-binding (G) domain ABE28_023735 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023735 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 ABE28_023735 IPR012675 Beta-grasp domain superfamily ABE28_023740 IPR009296 Protein of unknown function DUF951 ABE28_023745 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 ABE28_023745 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_023745 IPR011066 Mechanosensitive ion channel MscS, C-terminal ABE28_023745 IPR010920 LSM domain superfamily ABE28_023745 IPR006685 Mechanosensitive ion channel MscS ABE28_023750 IPR009665 Protein of unknown function DUF1256 ABE28_023750 IPR023430 Peptidase HybD-like domain superfamily ABE28_023760 IPR041468 ParB/Spo0J, HTH domain ABE28_023760 IPR004437 ParB/RepB/Spo0J partition protein ABE28_023760 IPR003115 ParB/Sulfiredoxin ABE28_023760 IPR036086 ParB/Sulfiredoxin superfamily ABE28_023765 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023765 IPR025669 AAA domain ABE28_023770 IPR041468 ParB/Spo0J, HTH domain ABE28_023770 IPR036086 ParB/Sulfiredoxin superfamily ABE28_023770 IPR003115 ParB/Sulfiredoxin ABE28_023770 IPR004437 ParB/RepB/Spo0J partition protein ABE28_023770 IPR023705 Nucleoid occlusion protein ABE28_023775 IPR003682 rRNA small subunit methyltransferase G ABE28_023775 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023780 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG ABE28_023780 IPR020595 MnmG-related, conserved site ABE28_023780 IPR026904 GidA associated domain 3 ABE28_023780 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related ABE28_023780 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023785 IPR018948 GTP-binding protein TrmE, N-terminal ABE28_023785 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023785 IPR031168 TrmE-type guanine nucleotide-binding domain ABE28_023785 IPR004520 tRNA modification GTPase MnmE ABE28_023785 IPR027368 tRNA modification GTPase MnmE domain 2 ABE28_023785 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 ABE28_023785 IPR005225 Small GTP-binding protein domain ABE28_023785 IPR025867 MnmE, helical domain ABE28_023785 IPR006073 GTP binding domain ABE28_023790 IPR038247 Jag, N-terminal domain superfamily ABE28_023790 IPR039247 Jag protein ABE28_023790 IPR036867 R3H domain superfamily ABE28_023790 IPR034079 Jag, R3H domain ABE28_023790 IPR038008 Jag, KH domain ABE28_023790 IPR015946 K homology domain-like, alpha/beta ABE28_023790 IPR032782 Jag, N-terminal ABE28_023790 IPR001374 R3H domain ABE28_023790 IPR004087 K Homology domain ABE28_023795 IPR028055 Membrane insertase YidC/Oxa1, C-terminal ABE28_023795 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 ABE28_023795 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes ABE28_023800 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_023800 IPR020539 Ribonuclease P, conserved site ABE28_023800 IPR000100 Ribonuclease P ABE28_023800 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_023805 IPR013159 Chromosomal replication initiator, DnaA C-terminal ABE28_023805 IPR024633 DnaA N-terminal domain ABE28_023805 IPR003593 AAA+ ATPase domain ABE28_023805 IPR001957 Chromosomal replication control, initiator DnaA ABE28_023805 IPR013317 Chromosomal replication initiator protein DnaA ABE28_023805 IPR018312 Chromosomal replication control, initiator DnaA, conserved site ABE28_023805 IPR010921 Trp repressor/replication initiator ABE28_023805 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023805 IPR038454 DnaA, N-terminal domain superfamily ABE28_023805 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023810 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal ABE28_023810 IPR022637 DNA polymerase III, beta sliding clamp, central ABE28_023810 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal ABE28_023810 IPR001001 DNA polymerase III, beta sliding clamp ABE28_023815 IPR036986 RNA-binding S4 domain superfamily ABE28_023815 IPR002942 RNA-binding S4 domain ABE28_023815 IPR014330 RNA-binding S4-related,YaaA ABE28_023820 IPR001238 DNA-binding, RecF ABE28_023820 IPR042174 DNA-binding RecF, domain 2 ABE28_023820 IPR018078 DNA-binding, RecF, conserved site ABE28_023820 IPR003395 RecF/RecN/SMC, N-terminal ABE28_023820 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023825 IPR007169 Extracellular matrix regulatory protein A ABE28_023830 IPR011557 DNA gyrase, subunit B ABE28_023830 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023830 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 ABE28_023830 IPR001241 DNA topoisomerase, type IIA ABE28_023830 IPR018522 DNA topoisomerase, type IIA, conserved site ABE28_023830 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ABE28_023830 IPR006171 TOPRIM domain ABE28_023830 IPR034160 DNA gyrase subunit B, TOPRIM domain ABE28_023830 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_023830 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_023830 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal ABE28_023830 IPR002288 DNA gyrase B subunit, C-terminal ABE28_023830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023835 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat ABE28_023835 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_023835 IPR005743 DNA gyrase, subunit A ABE28_023835 IPR013760 DNA topoisomerase, type IIA-like domain superfamily ABE28_023835 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal ABE28_023835 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta ABE28_023835 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily ABE28_023840 IPR037522 HD-GYP domain ABE28_023840 IPR006674 HD domain ABE28_023840 IPR006675 HDIG domain ABE28_023840 IPR003607 HD/PDEase domain ABE28_023865 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal ABE28_023865 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023865 IPR023753 FAD/NAD(P)-binding domain ABE28_023865 IPR013785 Aldolase-type TIM barrel ABE28_023870 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_023870 IPR036291 NAD(P)-binding domain superfamily ABE28_023870 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 IPR011294 3-hydroxybutyrate dehydrogenase ABE28_023890 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 IPR020904 Short-chain dehydrogenase/reductase, conserved site ABE28_023890 IPR036291 NAD(P)-binding domain superfamily ABE28_023905 IPR029058 Alpha/Beta hydrolase fold ABE28_023905 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain ABE28_023910 IPR020846 Major facilitator superfamily domain ABE28_023910 IPR011701 Major facilitator superfamily ABE28_023910 IPR036259 MFS transporter superfamily ABE28_023915 IPR017853 Glycoside hydrolase superfamily ABE28_023915 IPR001360 Glycoside hydrolase family 1 ABE28_023915 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_023915 IPR018120 Glycoside hydrolase family 1, active site ABE28_023920 IPR013013 Phosphotransferase system, EIIC component, type 1 ABE28_023920 IPR001996 Phosphotransferase system, IIB component, type 1 ABE28_023920 IPR003352 Phosphotransferase system, EIIC ABE28_023920 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 ABE28_023920 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site ABE28_023920 IPR011055 Duplicated hybrid motif ABE28_023920 IPR036878 Glucose permease domain IIB ABE28_023920 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component ABE28_023925 IPR000847 Transcription regulator HTH, LysR ABE28_023925 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023925 IPR005119 LysR, substrate-binding ABE28_023925 IPR036390 Winged helix DNA-binding domain superfamily ABE28_023930 IPR036013 Band 7/SPFH domain superfamily ABE28_023930 IPR031905 Flotillin, C-terminal domain ABE28_023930 IPR027705 Flotillin family ABE28_023930 IPR001107 Band 7 domain ABE28_023940 IPR003784 BioY protein ABE28_023950 IPR005744 Hly-III ABE28_023950 IPR004254 AdipoR/Haemolysin-III-related ABE28_023955 IPR036390 Winged helix DNA-binding domain superfamily ABE28_023955 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023955 IPR011991 ArsR-like helix-turn-helix domain ABE28_023955 IPR001845 HTH ArsR-type DNA-binding domain ABE28_023970 IPR003439 ABC transporter-like ABE28_023970 IPR017871 ABC transporter, conserved site ABE28_023970 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ABE28_023970 IPR030921 LPS export ABC transporter, ATP-binding protein LptB ABE28_023970 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023970 IPR003593 AAA+ ATPase domain ABE28_023990 IPR007344 GrpB/Dephospho-CoA kinase ABE28_023990 IPR016181 Acyl-CoA N-acyltransferase ABE28_023990 IPR000182 GNAT domain ABE28_024010 IPR005856 Cysteine synthase ABE28_024010 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site ABE28_024010 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_024010 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_024010 IPR005859 Cysteine synthase CysK ABE28_024015 IPR014710 RmlC-like jelly roll fold ABE28_024015 IPR010982 Lambda repressor-like, DNA-binding domain superfamily ABE28_024015 IPR013096 Cupin 2, conserved barrel ABE28_024015 IPR001387 Cro/C1-type helix-turn-helix domain ABE28_024015 IPR011051 RmlC-like cupin domain superfamily ABE28_024020 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain ABE28_024020 IPR016221 Bifunctional regulatory protein Ada ABE28_024020 IPR004026 Ada DNA repair, metal-binding ABE28_024020 IPR009057 Homeobox-like domain superfamily ABE28_024020 IPR035451 Ada-like domain superfamily ABE28_024020 IPR018060 DNA binding HTH domain, AraC-type ABE28_024020 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site ABE28_024020 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding ABE28_024020 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain ABE28_024020 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily ABE28_024020 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_024020 IPR018062 HTH domain AraC-type, conserved site ABE28_024025 IPR040442 Pyruvate kinase-like domain superfamily ABE28_024025 IPR039556 ICL/PEPM domain ABE28_024025 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site ABE28_024025 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily ABE28_024025 IPR012695 2-methylisocitrate lyase ABE28_024035 IPR004033 UbiE/COQ5 methyltransferase ABE28_024035 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024035 IPR023576 UbiE/COQ5 methyltransferase, conserved site ABE28_024050 IPR007815 Erythromycin esterase ABE28_024065 IPR001674 GMP synthase, C-terminal ABE28_024065 IPR011257 DNA glycosylase ABE28_024065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_024065 IPR000182 GNAT domain ABE28_024065 IPR025777 GMP synthetase ATP pyrophosphatase domain ABE28_024065 IPR029062 Class I glutamine amidotransferase-like ABE28_024065 IPR017926 Glutamine amidotransferase ABE28_024065 IPR016181 Acyl-CoA N-acyltransferase ABE28_024065 IPR005019 Methyladenine glycosylase ABE28_024110 IPR036259 MFS transporter superfamily ABE28_024110 IPR020846 Major facilitator superfamily domain ABE28_024110 IPR011701 Major facilitator superfamily ABE28_024130 IPR002577 Helix-turn-helix, HxlR type ABE28_024130 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_024130 IPR036390 Winged helix DNA-binding domain superfamily ABE28_024140 IPR005025 NADPH-dependent FMN reductase-like ABE28_024140 IPR029039 Flavoprotein-like superfamily ABE28_024150 IPR036291 NAD(P)-binding domain superfamily ABE28_024150 IPR002225 3-beta hydroxysteroid dehydrogenase/isomerase ABE28_024165 IPR011761 ATP-grasp fold ABE28_024165 IPR013815 ATP-grasp fold, subdomain 1 ABE28_024165 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site ABE28_024165 IPR005905 D-alanine--D-alanine ligase ABE28_024165 IPR016185 Pre-ATP-grasp domain superfamily ABE28_024165 IPR011127 D-alanine--D-alanine ligase, N-terminal domain ABE28_024165 IPR011095 D-alanine--D-alanine ligase, C-terminal ABE28_024170 IPR004537 Tellurite resistance methyltransferase, TehB ABE28_024170 IPR015985 Tellurite resistance methyltransferase TehB-like domain ABE28_024170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024195 IPR004751 Drug antiporter protein ABE28_024195 IPR020846 Major facilitator superfamily domain ABE28_024195 IPR036259 MFS transporter superfamily ABE28_024195 IPR011701 Major facilitator superfamily ABE28_024205 IPR020323 Protein of unknown function DUF2716 ABE28_024210 IPR007837 DNA damage-inducible protein DinB ABE28_024210 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024240 IPR040758 Release factor glutamine methyltransferase, N-terminal domain ABE28_024240 IPR002052 DNA methylase, N-6 adenine-specific, conserved site ABE28_024240 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific ABE28_024240 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024240 IPR007848 Methyltransferase small domain ABE28_024240 IPR004556 Methyltransferase HemK-like