ABE28_000020 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_000020 SM01240 ABE28_000020 ABE28_000025 SM00936 Penicillin-binding protein 5, C-terminal domain ABE28_000065 SM00382 ATPases associated with a variety of cellular activities ABE28_000075 SM00493 ABE28_000075 ABE28_000160 SM00966 SpoVT / AbrB like domain ABE28_000175 SM01208 ABE28_000175 ABE28_000180 SM00493 ABE28_000180 ABE28_000185 SM00650 Ribosomal RNA adenine dimethylases ABE28_000230 SM01400 ABE28_000230 ABE28_000240 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_000255 SM00382 ATPases associated with a variety of cellular activities ABE28_000275 SM00487 DEAD-like helicases superfamily ABE28_000275 SM00490 helicase superfamily c-terminal domain ABE28_000275 SM00982 ABE28_000275 ABE28_000275 SM01058 CarD-like/TRCF domain ABE28_000280 SM00966 SpoVT / AbrB like domain ABE28_000295 SM00363 S4 RNA-binding domain ABE28_000315 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_000330 SM00331 Sigma factor PP2C-like phosphatases ABE28_000330 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABE28_000340 SM00220 Serine/Threonine protein kinases, catalytic domain ABE28_000345 SM00977 TilS substrate C-terminal domain ABE28_000385 SM00905 Dihydroneopterin aldolase ABE28_000395 SM00530 Helix-turn-helix XRE-family like proteins ABE28_000440 SM00382 ATPases associated with a variety of cellular activities ABE28_000440 SM01086 C-terminal, D2-small domain, of ClpB protein ABE28_000445 SM00382 ATPases associated with a variety of cellular activities ABE28_000455 SM00670 Large family of predicted nucleotide-binding domains ABE28_000480 SM00840 ABE28_000480 ABE28_000485 SM00535 Ribonuclease III family ABE28_000490 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABE28_000500 SM00421 helix_turn_helix, Lux Regulon ABE28_000515 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. ABE28_000515 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABE28_000520 SM00649 Ribosomal protein L11/L12 ABE28_000550 SM00663 RNA polymerase I subunit A N-terminus ABE28_000570 SM00838 Elongation factor G C-terminus ABE28_000570 SM00889 Elongation factor G, domain IV ABE28_000580 SM01403 ABE28_000580 ABE28_000600 SM01382 ABE28_000600 ABE28_000600 SM01383 ABE28_000600 ABE28_000615 SM00322 K homology RNA-binding domain ABE28_000635 SM01374 ABE28_000635 ABE28_000640 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. ABE28_000695 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_000715 SM00662 RNA polymerases D ABE28_000725 SM00382 ATPases associated with a variety of cellular activities ABE28_000730 SM00382 ATPases associated with a variety of cellular activities ABE28_000775 SM00646 ABE28_000775 ABE28_000790 SM01251 ABE28_000790 ABE28_000930 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_000930 SM00387 Histidine kinase-like ATPases ABE28_000930 SM00388 His Kinase A (phosphoacceptor) domain ABE28_000935 SM00448 cheY-homologous receiver domain ABE28_000935 SM00862 Transcriptional regulatory protein, C terminal ABE28_000940 SM00382 ATPases associated with a variety of cellular activities ABE28_000965 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_000965 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_000970 SM00357 Cold shock protein domain ABE28_000975 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_001040 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABE28_001055 SM00530 Helix-turn-helix XRE-family like proteins ABE28_001060 SM00382 ATPases associated with a variety of cellular activities ABE28_001090 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_001105 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_001105 SM00866 ABE28_001105 ABE28_001125 SM00382 ATPases associated with a variety of cellular activities ABE28_001170 SM00823 Phosphopantetheine attachment site ABE28_001170 SM00824 Thioesterase ABE28_001175 SM00923 MbtH-like protein ABE28_001200 SM00382 ATPases associated with a variety of cellular activities ABE28_001220 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_001240 SM00422 helix_turn_helix, mercury resistance ABE28_001245 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_001245 SM01091 Transporter associated domain ABE28_001250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABE28_001250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_001250 SM00387 Histidine kinase-like ATPases ABE28_001250 SM00388 His Kinase A (phosphoacceptor) domain ABE28_001250 SM00448 cheY-homologous receiver domain ABE28_001255 SM00138 Methyltransferase, chemotaxis proteins ABE28_001260 SM00331 Sigma factor PP2C-like phosphatases ABE28_001260 SM00448 cheY-homologous receiver domain ABE28_001315 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABE28_001350 SM00331 Sigma factor PP2C-like phosphatases ABE28_001355 SM00487 DEAD-like helicases superfamily ABE28_001355 SM00490 helicase superfamily c-terminal domain ABE28_001385 SM01005 Alanine racemase, C-terminal domain ABE28_001410 SM00387 Histidine kinase-like ATPases ABE28_001415 SM00331 Sigma factor PP2C-like phosphatases ABE28_001435 SM00331 Sigma factor PP2C-like phosphatases ABE28_001440 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_001440 SM00732 Likely ribonuclease with RNase H fold. ABE28_001445 SM00731 SprT homologues. ABE28_001545 SM00382 ATPases associated with a variety of cellular activities ABE28_001555 SM00881 CoA binding domain ABE28_001570 SM00883 Chaperonin 10 Kd subunit ABE28_001600 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABE28_001625 SM00387 Histidine kinase-like ATPases ABE28_001625 SM00388 His Kinase A (phosphoacceptor) domain ABE28_001625 SM00448 cheY-homologous receiver domain ABE28_001650 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_001650 SM01134 ABE28_001650 ABE28_001655 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_001655 SM00895 ABE28_001655 ABE28_001670 SM01350 ABE28_001670 ABE28_001720 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_001720 SM00382 ATPases associated with a variety of cellular activities ABE28_001795 SM00460 Transglutaminase/protease-like homologues ABE28_001810 SM01061 CAT RNA binding domain ABE28_001855 SM00354 helix_turn _helix lactose operon repressor ABE28_001885 SM01001 AIR carboxylase ABE28_001895 SM00998 Adenylosuccinate lyase C-terminus ABE28_001910 SM01211 ABE28_001910 ABE28_001935 SM00798 AICARFT/IMPCHase bienzyme ABE28_001935 SM00851 MGS-like domain ABE28_001940 SM01209 ABE28_001940 ABE28_001940 SM01210 ABE28_001940 ABE28_001975 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABE28_001975 SM00292 breast cancer carboxy-terminal domain ABE28_001975 SM00532 Ligase N family ABE28_001995 SM00845 GatB domain ABE28_002020 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABE28_002125 SM00091 PAS domain ABE28_002125 SM00387 Histidine kinase-like ATPases ABE28_002125 SM00388 His Kinase A (phosphoacceptor) domain ABE28_002195 SM00448 cheY-homologous receiver domain ABE28_002195 SM00862 Transcriptional regulatory protein, C terminal ABE28_002200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_002200 SM00387 Histidine kinase-like ATPases ABE28_002200 SM00388 His Kinase A (phosphoacceptor) domain ABE28_002210 SM00382 ATPases associated with a variety of cellular activities ABE28_002240 SM00354 helix_turn _helix lactose operon repressor ABE28_002265 SM00363 S4 RNA-binding domain ABE28_002285 SM00382 ATPases associated with a variety of cellular activities ABE28_002305 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_002355 SM00421 helix_turn_helix, Lux Regulon ABE28_002355 SM00448 cheY-homologous receiver domain ABE28_002360 SM00382 ATPases associated with a variety of cellular activities ABE28_002380 SM00382 ATPases associated with a variety of cellular activities ABE28_002385 SM00382 ATPases associated with a variety of cellular activities ABE28_002420 SM00938 Nitrogen regulatory protein P-II ABE28_002430 SM00850 LytTr DNA-binding domain ABE28_002460 SM00257 Lysin motif ABE28_002475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_002475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_002505 SM00636 ABE28_002505 ABE28_002505 SM00637 ABE28_002505 ABE28_002530 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABE28_002535 SM00091 PAS domain ABE28_002535 SM00387 Histidine kinase-like ATPases ABE28_002535 SM00388 His Kinase A (phosphoacceptor) domain ABE28_002540 SM00487 DEAD-like helicases superfamily ABE28_002540 SM00490 helicase superfamily c-terminal domain ABE28_002555 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_002705 SM00852 Probable molybdopterin binding domain ABE28_002775 SM00478 endonuclease III ABE28_002815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_002825 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_002825 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_002835 SM00382 ATPases associated with a variety of cellular activities ABE28_002855 SM00382 ATPases associated with a variety of cellular activities ABE28_002900 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_002915 SM00852 Probable molybdopterin binding domain ABE28_002930 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABE28_002930 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_002965 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABE28_002965 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_003005 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_003020 SM00382 ATPases associated with a variety of cellular activities ABE28_003075 SM00857 Resolvase, N terminal domain ABE28_003085 SM00530 Helix-turn-helix XRE-family like proteins ABE28_003090 SM00530 Helix-turn-helix XRE-family like proteins ABE28_003115 SM00849 Metallo-beta-lactamase superfamily ABE28_003175 SM00507 HNH nucleases ABE28_003275 SM00257 Lysin motif ABE28_003350 SM00382 ATPases associated with a variety of cellular activities ABE28_003365 SM00387 Histidine kinase-like ATPases ABE28_003365 SM00388 His Kinase A (phosphoacceptor) domain ABE28_003370 SM00448 cheY-homologous receiver domain ABE28_003370 SM00862 Transcriptional regulatory protein, C terminal ABE28_003375 SM00382 ATPases associated with a variety of cellular activities ABE28_003385 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_003385 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_003445 SM01057 Eukaryotic-type carbonic anhydrase ABE28_003530 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_003530 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_003540 SM00382 ATPases associated with a variety of cellular activities ABE28_003560 SM00422 helix_turn_helix, mercury resistance ABE28_003625 SM00478 endonuclease III ABE28_003625 SM00525 ABE28_003625 ABE28_003660 SM00382 ATPases associated with a variety of cellular activities ABE28_003690 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_003755 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_003760 SM00382 ATPases associated with a variety of cellular activities ABE28_003770 SM00387 Histidine kinase-like ATPases ABE28_003770 SM00388 His Kinase A (phosphoacceptor) domain ABE28_003835 SM00829 Enoylreductase ABE28_003890 SM00850 LytTr DNA-binding domain ABE28_003920 SM00342 helix_turn_helix, arabinose operon control protein ABE28_003980 SM00914 ABE28_003980 ABE28_003990 SM00091 PAS domain ABE28_003990 SM00382 ATPases associated with a variety of cellular activities ABE28_004040 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_004070 SM00855 Phosphoglycerate mutase family ABE28_004090 SM00382 ATPases associated with a variety of cellular activities ABE28_004110 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_004110 SM00895 ABE28_004110 ABE28_004230 SM00382 ATPases associated with a variety of cellular activities ABE28_004235 SM00382 ATPases associated with a variety of cellular activities ABE28_004300 SM00530 Helix-turn-helix XRE-family like proteins ABE28_004320 SM00095 Transthyretin ABE28_004325 SM00448 cheY-homologous receiver domain ABE28_004325 SM00862 Transcriptional regulatory protein, C terminal ABE28_004330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_004330 SM00387 Histidine kinase-like ATPases ABE28_004330 SM00388 His Kinase A (phosphoacceptor) domain ABE28_004395 SM01061 CAT RNA binding domain ABE28_004410 SM00382 ATPases associated with a variety of cellular activities ABE28_004485 SM00257 Lysin motif ABE28_004530 SM00829 Enoylreductase ABE28_004545 SM00873 B3/4 domain ABE28_004550 SM00567 E-Z type HEAT repeats ABE28_004570 SM00382 ATPases associated with a variety of cellular activities ABE28_004590 SM00763 PrkA AAA domain ABE28_004690 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_004690 SM00895 ABE28_004690 ABE28_004735 SM00382 ATPases associated with a variety of cellular activities ABE28_004790 SM01002 Alanine dehydrogenase/PNT, C-terminal domain ABE28_004790 SM01003 Alanine dehydrogenase/PNT, N-terminal domain ABE28_004870 SM00631 ABE28_004870 ABE28_004915 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_004930 SM00448 cheY-homologous receiver domain ABE28_004930 SM00862 Transcriptional regulatory protein, C terminal ABE28_004935 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_004935 SM00387 Histidine kinase-like ATPases ABE28_004935 SM00388 His Kinase A (phosphoacceptor) domain ABE28_004990 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_004990 SM00895 ABE28_004990 ABE28_005005 SM00346 helix_turn_helix isocitrate lyase regulation ABE28_005015 SM00861 Transketolase, pyrimidine binding domain ABE28_005180 SM00448 cheY-homologous receiver domain ABE28_005180 SM00862 Transcriptional regulatory protein, C terminal ABE28_005185 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_005185 SM00387 Histidine kinase-like ATPases ABE28_005185 SM00388 His Kinase A (phosphoacceptor) domain ABE28_005205 SM00357 Cold shock protein domain ABE28_005225 SM01131 ABE28_005225 ABE28_005265 SM00450 Rhodanese Homology Domain ABE28_005280 SM00014 Acid phosphatase homologues ABE28_005290 SM00530 Helix-turn-helix XRE-family like proteins ABE28_005300 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_005320 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_005320 SM01091 Transporter associated domain ABE28_005340 SM01091 Transporter associated domain ABE28_005345 SM00387 Histidine kinase-like ATPases ABE28_005345 SM00388 His Kinase A (phosphoacceptor) domain ABE28_005380 SM00861 Transketolase, pyrimidine binding domain ABE28_005405 SM00344 helix_turn_helix ASNC type ABE28_005415 SM00344 helix_turn_helix ASNC type ABE28_005445 SM01060 ABE28_005445 ABE28_005475 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_005495 SM00382 ATPases associated with a variety of cellular activities ABE28_005500 SM00382 ATPases associated with a variety of cellular activities ABE28_005530 SM00382 ATPases associated with a variety of cellular activities ABE28_005555 SM00382 ATPases associated with a variety of cellular activities ABE28_005555 SM00930 ABE28_005555 ABE28_005560 SM00849 Metallo-beta-lactamase superfamily ABE28_005665 SM00382 ATPases associated with a variety of cellular activities ABE28_005690 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_005725 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_005755 SM00382 ATPases associated with a variety of cellular activities ABE28_005775 SM00014 Acid phosphatase homologues ABE28_005805 SM00849 Metallo-beta-lactamase superfamily ABE28_005820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_005825 SM00421 helix_turn_helix, Lux Regulon ABE28_005825 SM00448 cheY-homologous receiver domain ABE28_005840 SM00914 ABE28_005840 ABE28_005930 SM00642 Alpha-amylase domain ABE28_005940 SM00642 Alpha-amylase domain ABE28_005945 SM00642 Alpha-amylase domain ABE28_005950 SM00354 helix_turn _helix lactose operon repressor ABE28_005955 SM00849 Metallo-beta-lactamase superfamily ABE28_006010 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_006015 SM00419 helix_turn_helix, cAMP Regulatory protein ABE28_006020 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABE28_006040 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABE28_006045 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABE28_006065 SM00382 ATPases associated with a variety of cellular activities ABE28_006065 SM01086 C-terminal, D2-small domain, of ClpB protein ABE28_006100 SM00825 Beta-ketoacyl synthase ABE28_006150 SM00155 Phospholipase D. Active site motifs. ABE28_006190 SM01118 ABE28_006190 ABE28_006195 SM00954 Region found in RelA / SpoT proteins ABE28_006215 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_006215 SM00924 MgtE intracellular N domain ABE28_006325 SM00530 Helix-turn-helix XRE-family like proteins ABE28_006395 SM00849 Metallo-beta-lactamase superfamily ABE28_006430 SM00354 helix_turn _helix lactose operon repressor ABE28_006435 SM00642 Alpha-amylase domain ABE28_006490 SM00422 helix_turn_helix, mercury resistance ABE28_006525 SM00382 ATPases associated with a variety of cellular activities ABE28_006575 SM00357 Cold shock protein domain ABE28_006645 SM00382 ATPases associated with a variety of cellular activities ABE28_006670 SM00382 ATPases associated with a variety of cellular activities ABE28_006675 SM00382 ATPases associated with a variety of cellular activities ABE28_006750 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_006755 SM00382 ATPases associated with a variety of cellular activities ABE28_006765 SM00357 Cold shock protein domain ABE28_006820 SM00091 PAS domain ABE28_006820 SM00387 Histidine kinase-like ATPases ABE28_006820 SM00388 His Kinase A (phosphoacceptor) domain ABE28_006880 SM00829 Enoylreductase ABE28_006890 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_006900 SM00091 PAS domain ABE28_006900 SM00387 Histidine kinase-like ATPases ABE28_006900 SM00388 His Kinase A (phosphoacceptor) domain ABE28_006920 SM00387 Histidine kinase-like ATPases ABE28_006920 SM00388 His Kinase A (phosphoacceptor) domain ABE28_006925 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_006965 SM00318 Staphylococcal nuclease homologues ABE28_006970 SM00382 ATPases associated with a variety of cellular activities ABE28_007015 SM00260 Two component signalling adaptor domain ABE28_007015 SM00448 cheY-homologous receiver domain ABE28_007050 SM00052 Putative diguanylate phosphodiesterase ABE28_007070 SM00849 Metallo-beta-lactamase superfamily ABE28_007120 SM00849 Metallo-beta-lactamase superfamily ABE28_007150 SM00861 Transketolase, pyrimidine binding domain ABE28_007250 SM00838 Elongation factor G C-terminus ABE28_007280 SM00670 Large family of predicted nucleotide-binding domains ABE28_007295 SM00878 Biotin carboxylase C-terminal domain ABE28_007415 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_007490 SM00740 ABE28_007490 ABE28_007495 SM00740 ABE28_007495 ABE28_007530 SM00842 Cell division protein FtsA ABE28_007535 SM00864 Tubulin/FtsZ family, GTPase domain ABE28_007535 SM00865 Tubulin/FtsZ family, C-terminal domain ABE28_007580 SM00363 S4 RNA-binding domain ABE28_007600 SM00363 S4 RNA-binding domain ABE28_007625 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain ABE28_007630 SM00851 MGS-like domain ABE28_007630 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABE28_007645 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family ABE28_007660 SM00831 Cation transporter/ATPase, N-terminus ABE28_007675 SM00072 Guanylate kinase homologues. ABE28_007680 SM01409 ABE28_007680 ABE28_007690 SM00487 DEAD-like helicases superfamily ABE28_007690 SM00490 helicase superfamily c-terminal domain ABE28_007715 SM00331 Sigma factor PP2C-like phosphatases ABE28_007715 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain ABE28_007720 SM00220 Serine/Threonine protein kinases, catalytic domain ABE28_007720 SM00740 ABE28_007720 ABE28_007735 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain ABE28_007755 SM01120 ABE28_007755 ABE28_007755 SM01121 ABE28_007755 ABE28_007770 SM00487 DEAD-like helicases superfamily ABE28_007770 SM00490 helicase superfamily c-terminal domain ABE28_007775 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_007785 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. ABE28_007790 SM00822 ABE28_007790 ABE28_007800 SM00358 Double-stranded RNA binding motif ABE28_007800 SM00535 Ribonuclease III family ABE28_007805 SM00968 SMC proteins Flexible Hinge Domain ABE28_007810 SM00382 ATPases associated with a variety of cellular activities ABE28_007810 SM00962 SRP54-type protein, GTPase domain ABE28_007810 SM00963 SRP54-type protein, helical bundle domain ABE28_007825 SM00382 ATPases associated with a variety of cellular activities ABE28_007825 SM00962 SRP54-type protein, GTPase domain ABE28_007825 SM00963 SRP54-type protein, helical bundle domain ABE28_007890 SM00881 CoA binding domain ABE28_007900 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABE28_007900 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABE28_007900 SM00493 ABE28_007900 ABE28_007920 SM00382 ATPases associated with a variety of cellular activities ABE28_007920 SM01086 C-terminal, D2-small domain, of ClpB protein ABE28_007960 SM00382 ATPases associated with a variety of cellular activities ABE28_008015 SM00448 cheY-homologous receiver domain ABE28_008050 SM00962 SRP54-type protein, GTPase domain ABE28_008060 SM00448 cheY-homologous receiver domain ABE28_008065 SM00073 Histidine Phosphotransfer domain ABE28_008065 SM00260 Two component signalling adaptor domain ABE28_008065 SM00387 Histidine kinase-like ATPases ABE28_008065 SM01231 ABE28_008065 ABE28_008070 SM00260 Two component signalling adaptor domain ABE28_008130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_008140 SM00479 ABE28_008140 ABE28_008140 SM00481 DNA polymerase alpha chain like domain ABE28_008150 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_008150 SM00322 K homology RNA-binding domain ABE28_008185 SM00904 Riboflavin kinase ABE28_008190 SM01387 ABE28_008190 ABE28_008195 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_008195 SM00322 K homology RNA-binding domain ABE28_008225 SM00859 Semialdehyde dehydrogenase, NAD binding domain ABE28_008235 SM01130 ABE28_008235 ABE28_008240 SM00849 Metallo-beta-lactamase superfamily ABE28_008255 SM00382 ATPases associated with a variety of cellular activities ABE28_008255 SM00843 ABE28_008255 ABE28_008265 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_008265 SM00866 ABE28_008265 ABE28_008275 SM00382 ATPases associated with a variety of cellular activities ABE28_008315 SM00530 Helix-turn-helix XRE-family like proteins ABE28_008325 SM00852 Probable molybdopterin binding domain ABE28_008330 SM00382 ATPases associated with a variety of cellular activities ABE28_008335 SM00322 K homology RNA-binding domain ABE28_008335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_008365 SM00829 Enoylreductase ABE28_008370 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_008385 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABE28_008385 SM00534 ATPase domain of DNA mismatch repair MUTS family ABE28_008390 SM00853 MutL C terminal dimerisation domain ABE28_008390 SM01340 ABE28_008390 ABE28_008420 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_008420 SM00895 ABE28_008420 ABE28_008425 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABE28_008465 SM00346 helix_turn_helix isocitrate lyase regulation ABE28_008510 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain ABE28_008515 SM00849 Metallo-beta-lactamase superfamily ABE28_008520 SM00882 Coenzyme A transferase ABE28_008525 SM00882 Coenzyme A transferase ABE28_008530 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_008530 SM00866 ABE28_008530 ABE28_008555 SM00849 Metallo-beta-lactamase superfamily ABE28_008600 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_008600 SM00387 Histidine kinase-like ATPases ABE28_008600 SM00388 His Kinase A (phosphoacceptor) domain ABE28_008605 SM00448 cheY-homologous receiver domain ABE28_008605 SM00862 Transcriptional regulatory protein, C terminal ABE28_008625 SM00091 PAS domain ABE28_008625 SM00382 ATPases associated with a variety of cellular activities ABE28_008665 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_008665 SM00866 ABE28_008665 ABE28_008710 SM00860 SMI1 / KNR4 family ABE28_008715 SM00387 Histidine kinase-like ATPases ABE28_008730 SM00382 ATPases associated with a variety of cellular activities ABE28_008750 SM00422 helix_turn_helix, mercury resistance ABE28_008755 SM01230 ABE28_008755 ABE28_008765 SM00530 Helix-turn-helix XRE-family like proteins ABE28_008770 SM00530 Helix-turn-helix XRE-family like proteins ABE28_008830 SM00530 Helix-turn-helix XRE-family like proteins ABE28_008865 SM00507 HNH nucleases ABE28_009005 SM00257 Lysin motif ABE28_009095 SM00530 Helix-turn-helix XRE-family like proteins ABE28_009220 SM00507 HNH nucleases ABE28_009290 SM00849 Metallo-beta-lactamase superfamily ABE28_009415 SM00530 Helix-turn-helix XRE-family like proteins ABE28_009435 SM00448 cheY-homologous receiver domain ABE28_009435 SM00862 Transcriptional regulatory protein, C terminal ABE28_009440 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_009440 SM00387 Histidine kinase-like ATPases ABE28_009440 SM00388 His Kinase A (phosphoacceptor) domain ABE28_009510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABE28_009510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_009535 SM00257 Lysin motif ABE28_009535 SM00641 Glycosyl hydrolases family 25 ABE28_009555 SM00148 Phospholipase C, catalytic domain (part); domain X ABE28_009565 SM00382 ATPases associated with a variety of cellular activities ABE28_009570 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_009570 SM00387 Histidine kinase-like ATPases ABE28_009570 SM00388 His Kinase A (phosphoacceptor) domain ABE28_009575 SM00448 cheY-homologous receiver domain ABE28_009575 SM00862 Transcriptional regulatory protein, C terminal ABE28_009595 SM00421 helix_turn_helix, Lux Regulon ABE28_009620 SM00100 Cyclic nucleotide-monophosphate binding domain ABE28_009635 SM00422 helix_turn_helix, mercury resistance ABE28_009775 SM00861 Transketolase, pyrimidine binding domain ABE28_009815 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_009815 SM00866 ABE28_009815 ABE28_009865 SM00642 Alpha-amylase domain ABE28_009870 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_009870 SM00866 ABE28_009870 ABE28_009885 SM00480 DNA polymerase III beta subunit ABE28_009900 SM00387 Histidine kinase-like ATPases ABE28_009900 SM00388 His Kinase A (phosphoacceptor) domain ABE28_009905 SM00257 Lysin motif ABE28_009905 SM00646 ABE28_009905 ABE28_009915 SM00530 Helix-turn-helix XRE-family like proteins ABE28_009920 SM00530 Helix-turn-helix XRE-family like proteins ABE28_009940 SM00047 Lysozyme subfamily 2 ABE28_009940 SM00257 Lysin motif ABE28_009950 SM00257 Lysin motif ABE28_009955 SM00857 Resolvase, N terminal domain ABE28_009965 SM00861 Transketolase, pyrimidine binding domain ABE28_010030 SM00448 cheY-homologous receiver domain ABE28_010120 SM00354 helix_turn _helix lactose operon repressor ABE28_010125 SM01133 ABE28_010125 ABE28_010155 SM00450 Rhodanese Homology Domain ABE28_010160 SM00450 Rhodanese Homology Domain ABE28_010165 SM00450 Rhodanese Homology Domain ABE28_010165 SM00849 Metallo-beta-lactamase superfamily ABE28_010180 SM00530 Helix-turn-helix XRE-family like proteins ABE28_010205 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_010205 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_010210 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_010215 SM00382 ATPases associated with a variety of cellular activities ABE28_010235 SM00710 Parallel beta-helix repeats ABE28_010255 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_010270 SM00267 diguanylate cyclase ABE28_010290 SM00448 cheY-homologous receiver domain ABE28_010290 SM00862 Transcriptional regulatory protein, C terminal ABE28_010295 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_010295 SM00387 Histidine kinase-like ATPases ABE28_010295 SM00388 His Kinase A (phosphoacceptor) domain ABE28_010300 SM00047 Lysozyme subfamily 2 ABE28_010330 SM00382 ATPases associated with a variety of cellular activities ABE28_010415 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_010415 SM00866 ABE28_010415 ABE28_010425 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_010435 SM00861 Transketolase, pyrimidine binding domain ABE28_010520 SM00342 helix_turn_helix, arabinose operon control protein ABE28_010570 SM00796 Allophanate hydrolase subunit 1 ABE28_010575 SM00797 Allophanate hydrolase subunit 2 ABE28_010580 SM00346 helix_turn_helix isocitrate lyase regulation ABE28_010630 SM00411 bacterial (prokaryotic) histone like domain ABE28_010640 SM00060 Fibronectin type 3 domain ABE28_010640 SM00495 Chitin-binding domain type 3 ABE28_010655 SM00382 ATPases associated with a variety of cellular activities ABE28_010755 SM01207 ABE28_010755 ABE28_010760 SM00881 CoA binding domain ABE28_010765 SM00387 Histidine kinase-like ATPases ABE28_010765 SM00433 TopoisomeraseII ABE28_010770 SM00434 DNA Topoisomerase IV ABE28_010790 SM00822 ABE28_010790 ABE28_010805 SM00091 PAS domain ABE28_010805 SM00382 ATPases associated with a variety of cellular activities ABE28_010860 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_010895 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_010895 SM00866 ABE28_010895 ABE28_010985 SM00878 Biotin carboxylase C-terminal domain ABE28_011075 SM00894 Excalibur calcium-binding domain ABE28_011120 SM00829 Enoylreductase ABE28_011160 SM00448 cheY-homologous receiver domain ABE28_011160 SM00862 Transcriptional regulatory protein, C terminal ABE28_011180 SM00382 ATPases associated with a variety of cellular activities ABE28_011220 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_011270 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABE28_011270 SM00267 diguanylate cyclase ABE28_011275 SM00490 helicase superfamily c-terminal domain ABE28_011485 SM00387 Histidine kinase-like ATPases ABE28_011485 SM00388 His Kinase A (phosphoacceptor) domain ABE28_011555 SM00858 ABE28_011555 ABE28_011560 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_011560 SM00895 ABE28_011560 ABE28_011565 SM01060 ABE28_011565 ABE28_011620 SM00640 Glycosyl hydrolases family 32 ABE28_011625 SM00354 helix_turn _helix lactose operon repressor ABE28_011645 SM00640 Glycosyl hydrolases family 32 ABE28_011655 SM00354 helix_turn _helix lactose operon repressor ABE28_011685 SM00382 ATPases associated with a variety of cellular activities ABE28_011700 SM00382 ATPases associated with a variety of cellular activities ABE28_011700 SM00448 cheY-homologous receiver domain ABE28_011705 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_011705 SM00091 PAS domain ABE28_011705 SM00387 Histidine kinase-like ATPases ABE28_011705 SM00388 His Kinase A (phosphoacceptor) domain ABE28_011720 SM01065 Starch binding domain ABE28_011770 SM00849 Metallo-beta-lactamase superfamily ABE28_011810 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_011810 SM00895 ABE28_011810 ABE28_011835 SM00870 ABE28_011835 ABE28_011865 SM00642 Alpha-amylase domain ABE28_011870 SM00382 ATPases associated with a variety of cellular activities ABE28_011870 SM01086 C-terminal, D2-small domain, of ClpB protein ABE28_011935 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_011935 SM00382 ATPases associated with a variety of cellular activities ABE28_011970 SM00855 Phosphoglycerate mutase family ABE28_012000 SM00155 Phospholipase D. Active site motifs. ABE28_012020 SM00642 Alpha-amylase domain ABE28_012115 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_012140 SM00382 ATPases associated with a variety of cellular activities ABE28_012175 SM00421 helix_turn_helix, Lux Regulon ABE28_012230 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_012230 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_012235 SM00382 ATPases associated with a variety of cellular activities ABE28_012295 SM00357 Cold shock protein domain ABE28_012310 SM00382 ATPases associated with a variety of cellular activities ABE28_012315 SM00382 ATPases associated with a variety of cellular activities ABE28_012390 SM00060 Fibronectin type 3 domain ABE28_012405 SM00257 Lysin motif ABE28_012415 SM00479 ABE28_012415 ABE28_012450 SM00387 Histidine kinase-like ATPases ABE28_012450 SM00388 His Kinase A (phosphoacceptor) domain ABE28_012475 SM00858 ABE28_012475 ABE28_012480 SM00342 helix_turn_helix, arabinose operon control protein ABE28_012490 SM00354 helix_turn _helix lactose operon repressor ABE28_012510 SM00829 Enoylreductase ABE28_012610 SM00382 ATPases associated with a variety of cellular activities ABE28_012620 SM00257 Lysin motif ABE28_012620 SM00636 ABE28_012620 ABE28_012630 SM00155 Phospholipase D. Active site motifs. ABE28_012650 SM00903 Flavin reductase like domain ABE28_012770 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_012775 SM00849 Metallo-beta-lactamase superfamily ABE28_012785 SM00382 ATPases associated with a variety of cellular activities ABE28_012800 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) ABE28_012800 SM00091 PAS domain ABE28_012800 SM00387 Histidine kinase-like ATPases ABE28_012800 SM00388 His Kinase A (phosphoacceptor) domain ABE28_012820 SM00341 Helicase and RNase D C-terminal ABE28_012820 SM00487 DEAD-like helicases superfamily ABE28_012820 SM00490 helicase superfamily c-terminal domain ABE28_012820 SM00956 ABE28_012820 ABE28_012825 SM00257 Lysin motif ABE28_012845 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_012850 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_012850 SM00387 Histidine kinase-like ATPases ABE28_012850 SM00388 His Kinase A (phosphoacceptor) domain ABE28_012850 SM00448 cheY-homologous receiver domain ABE28_012855 SM00448 cheY-homologous receiver domain ABE28_012860 SM00267 diguanylate cyclase ABE28_012860 SM00448 cheY-homologous receiver domain ABE28_012865 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_012895 SM00382 ATPases associated with a variety of cellular activities ABE28_012905 SM00244 prohibitin homologues ABE28_012930 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_012935 SM00257 Lysin motif ABE28_012965 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_012965 SM01134 ABE28_012965 ABE28_012975 SM00861 Transketolase, pyrimidine binding domain ABE28_012990 SM01018 B12 binding domain ABE28_013005 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen ABE28_013025 SM00947 Carbonic anhydrase ABE28_013100 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_013100 SM00387 Histidine kinase-like ATPases ABE28_013100 SM00388 His Kinase A (phosphoacceptor) domain ABE28_013105 SM00448 cheY-homologous receiver domain ABE28_013105 SM00862 Transcriptional regulatory protein, C terminal ABE28_013125 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABE28_013135 SM01007 Class II Aldolase and Adducin N-terminal domain ABE28_013175 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_013175 SM00245 tail specific protease ABE28_013220 SM00857 Resolvase, N terminal domain ABE28_013240 SM00387 Histidine kinase-like ATPases ABE28_013240 SM00388 His Kinase A (phosphoacceptor) domain ABE28_013260 SM00091 PAS domain ABE28_013260 SM00382 ATPases associated with a variety of cellular activities ABE28_013275 SM00882 Coenzyme A transferase ABE28_013280 SM00882 Coenzyme A transferase ABE28_013430 SM00567 E-Z type HEAT repeats ABE28_013430 SM00932 Scaffold protein Nfu/NifU N terminal ABE28_013435 SM00382 ATPases associated with a variety of cellular activities ABE28_013440 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_013480 SM00529 Helix-turn-helix diphteria tox regulatory element ABE28_013485 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABE28_013485 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABE28_013485 SM00493 ABE28_013485 ABE28_013520 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_013520 SM01134 ABE28_013520 ABE28_013545 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. ABE28_013580 SM00354 helix_turn _helix lactose operon repressor ABE28_013585 SM01133 ABE28_013585 ABE28_013625 SM00354 helix_turn _helix lactose operon repressor ABE28_013630 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_013630 SM00866 ABE28_013630 ABE28_013645 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_013655 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_013655 SM00866 ABE28_013655 ABE28_013745 SM00346 helix_turn_helix isocitrate lyase regulation ABE28_013755 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_013795 SM00248 ankyrin repeats ABE28_013800 SM00448 cheY-homologous receiver domain ABE28_013800 SM00862 Transcriptional regulatory protein, C terminal ABE28_013805 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_013805 SM00387 Histidine kinase-like ATPases ABE28_013805 SM00388 His Kinase A (phosphoacceptor) domain ABE28_013825 SM00422 helix_turn_helix, mercury resistance ABE28_013855 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABE28_013875 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_013905 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABE28_013905 SM00475 5'-3' exonuclease ABE28_013910 SM00450 Rhodanese Homology Domain ABE28_013955 SM00491 ABE28_013955 ABE28_013965 SM00357 Cold shock protein domain ABE28_013970 SM00981 ABE28_013970 ABE28_014005 SM00487 DEAD-like helicases superfamily ABE28_014005 SM00490 helicase superfamily c-terminal domain ABE28_014055 SM00478 endonuclease III ABE28_014055 SM00525 ABE28_014055 ABE28_014100 SM01130 ABE28_014100 ABE28_014105 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_014105 SM00895 ABE28_014105 ABE28_014125 SM00479 ABE28_014125 ABE28_014125 SM00487 DEAD-like helicases superfamily ABE28_014125 SM00491 ABE28_014125 ABE28_014165 SM00851 MGS-like domain ABE28_014220 SM00914 ABE28_014220 ABE28_014225 SM00028 Tetratricopeptide repeats ABE28_014260 SM00138 Methyltransferase, chemotaxis proteins ABE28_014265 SM00562 ABE28_014265 ABE28_014295 SM00411 bacterial (prokaryotic) histone like domain ABE28_014320 SM00091 PAS domain ABE28_014320 SM00382 ATPases associated with a variety of cellular activities ABE28_014350 SM01240 ABE28_014350 ABE28_014355 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_014360 SM00563 Phosphate acyltransferases ABE28_014395 SM00870 ABE28_014395 ABE28_014405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_014415 SM00422 helix_turn_helix, mercury resistance ABE28_014430 SM00257 Lysin motif ABE28_014440 SM00487 DEAD-like helicases superfamily ABE28_014440 SM00490 helicase superfamily c-terminal domain ABE28_014475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_014475 SM00387 Histidine kinase-like ATPases ABE28_014475 SM00388 His Kinase A (phosphoacceptor) domain ABE28_014480 SM00448 cheY-homologous receiver domain ABE28_014480 SM00862 Transcriptional regulatory protein, C terminal ABE28_014500 SM00363 S4 RNA-binding domain ABE28_014605 SM00387 Histidine kinase-like ATPases ABE28_014615 SM00936 Penicillin-binding protein 5, C-terminal domain ABE28_014620 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain ABE28_014680 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_014720 SM00871 Bacterial transcription activator, effector binding domain ABE28_014730 SM00849 Metallo-beta-lactamase superfamily ABE28_014750 SM00382 ATPases associated with a variety of cellular activities ABE28_014770 SM00849 Metallo-beta-lactamase superfamily ABE28_014785 SM01350 ABE28_014785 ABE28_014820 SM00382 ATPases associated with a variety of cellular activities ABE28_014830 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_014830 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_014860 SM00861 Transketolase, pyrimidine binding domain ABE28_014875 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_014880 SM00091 PAS domain ABE28_014880 SM00382 ATPases associated with a variety of cellular activities ABE28_014900 SM00448 cheY-homologous receiver domain ABE28_014905 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_014920 SM00363 S4 RNA-binding domain ABE28_014925 SM00861 Transketolase, pyrimidine binding domain ABE28_014960 SM00878 Biotin carboxylase C-terminal domain ABE28_015005 SM00382 ATPases associated with a variety of cellular activities ABE28_015010 SM00841 Elongation factor P, C-terminal ABE28_015010 SM01185 ABE28_015010 ABE28_015065 SM00450 Rhodanese Homology Domain ABE28_015085 SM00487 DEAD-like helicases superfamily ABE28_015085 SM00490 helicase superfamily c-terminal domain ABE28_015130 SM00382 ATPases associated with a variety of cellular activities ABE28_015140 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_015155 SM00849 Metallo-beta-lactamase superfamily ABE28_015180 SM00631 ABE28_015180 ABE28_015200 SM00028 Tetratricopeptide repeats ABE28_015235 SM00382 ATPases associated with a variety of cellular activities ABE28_015310 SM00382 ATPases associated with a variety of cellular activities ABE28_015320 SM00518 AP endonuclease family 2 ABE28_015325 SM00487 DEAD-like helicases superfamily ABE28_015325 SM00490 helicase superfamily c-terminal domain ABE28_015370 SM00400 zinc finger ABE28_015370 SM00493 ABE28_015370 ABE28_015385 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_015430 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_015485 SM01133 ABE28_015485 ABE28_015490 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_015505 SM00271 DnaJ molecular chaperone homology domain ABE28_015525 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_015530 SM00838 Elongation factor G C-terminus ABE28_015565 SM00849 Metallo-beta-lactamase superfamily ABE28_015575 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABE28_015595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_015605 SM01103 ABE28_015605 ABE28_015735 SM00732 Likely ribonuclease with RNase H fold. ABE28_015745 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_015775 SM00382 ATPases associated with a variety of cellular activities ABE28_015780 SM00028 Tetratricopeptide repeats ABE28_015810 SM00382 ATPases associated with a variety of cellular activities ABE28_015825 SM00382 ATPases associated with a variety of cellular activities ABE28_015830 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_015875 SM00984 UDP binding domain ABE28_016035 SM00984 UDP binding domain ABE28_016060 SM00530 Helix-turn-helix XRE-family like proteins ABE28_016090 SM00382 ATPases associated with a variety of cellular activities ABE28_016095 SM00382 ATPases associated with a variety of cellular activities ABE28_016150 SM00287 Bacterial SH3 domain homologues ABE28_016150 SM00646 ABE28_016150 ABE28_016160 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_016160 SM00954 Region found in RelA / SpoT proteins ABE28_016200 SM01323 ABE28_016200 ABE28_016220 SM00382 ATPases associated with a variety of cellular activities ABE28_016225 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABE28_016255 SM00257 Lysin motif ABE28_016325 SM01317 ABE28_016325 ABE28_016345 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_016360 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_016440 SM00257 Lysin motif ABE28_016450 SM01004 Delta-aminolevulinic acid dehydratase ABE28_016485 SM00382 ATPases associated with a variety of cellular activities ABE28_016485 SM00464 Found in ATP-dependent protease La (LON) ABE28_016490 SM00382 ATPases associated with a variety of cellular activities ABE28_016500 SM00382 ATPases associated with a variety of cellular activities ABE28_016500 SM00994 ClpX C4-type zinc finger ABE28_016500 SM01086 C-terminal, D2-small domain, of ClpB protein ABE28_016525 SM01329 ABE28_016525 ABE28_016530 SM00917 LeuA allosteric (dimerisation) domain ABE28_016605 SM00382 ATPases associated with a variety of cellular activities ABE28_016635 SM00909 Sporulation and spore germination ABE28_016645 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_016650 SM00421 helix_turn_helix, Lux Regulon ABE28_016685 SM00465 GIY-YIG type nucleases (URI domain) ABE28_016695 SM00893 Electron transfer flavoprotein domain ABE28_016700 SM00893 Electron transfer flavoprotein domain ABE28_016725 SM00463 Small MutS-related domain ABE28_016725 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABE28_016725 SM00534 ATPase domain of DNA mismatch repair MUTS family ABE28_016730 SM00278 Helix-hairpin-helix DNA-binding motif class 1 ABE28_016730 SM00481 DNA polymerase alpha chain like domain ABE28_016730 SM00483 DNA polymerase X family ABE28_016750 SM00873 B3/4 domain ABE28_016750 SM00874 tRNA synthetase B5 domain ABE28_016750 SM00896 Ferredoxin-fold anticodon binding domain ABE28_016760 SM00967 RNA 2'-O ribose methyltransferase substrate binding ABE28_016810 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_016810 SM00895 ABE28_016810 ABE28_016875 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_016885 SM00382 ATPases associated with a variety of cellular activities ABE28_016905 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABE28_016920 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain ABE28_016920 SM01232 ABE28_016920 ABE28_016925 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs ABE28_016925 SM00474 3'-5' exonuclease ABE28_016925 SM00475 5'-3' exonuclease ABE28_016925 SM00482 DNA polymerase A domain ABE28_016930 SM00244 prohibitin homologues ABE28_016935 SM00244 prohibitin homologues ABE28_016940 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_016940 SM00387 Histidine kinase-like ATPases ABE28_016940 SM00388 His Kinase A (phosphoacceptor) domain ABE28_016945 SM00448 cheY-homologous receiver domain ABE28_016945 SM00862 Transcriptional regulatory protein, C terminal ABE28_016955 SM01329 ABE28_016955 ABE28_017010 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_017015 SM00919 Malic enzyme, NAD binding domain ABE28_017015 SM01274 ABE28_017015 ABE28_017020 SM00481 DNA polymerase alpha chain like domain ABE28_017045 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_017065 SM00849 Metallo-beta-lactamase superfamily ABE28_017100 SM00852 Probable molybdopterin binding domain ABE28_017180 SM00382 ATPases associated with a variety of cellular activities ABE28_017225 SM00981 ABE28_017225 ABE28_017255 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABE28_017260 SM00267 diguanylate cyclase ABE28_017265 SM00363 S4 RNA-binding domain ABE28_017265 SM01390 ABE28_017265 ABE28_017290 SM00363 S4 RNA-binding domain ABE28_017310 SM00116 Domain in cystathionine beta-synthase and other proteins. ABE28_017325 SM00354 helix_turn _helix lactose operon repressor ABE28_017330 SM00830 Chorismate mutase type II ABE28_017335 SM00842 Cell division protein FtsA ABE28_017370 SM00382 ATPases associated with a variety of cellular activities ABE28_017370 SM00843 ABE28_017370 ABE28_017400 SM00342 helix_turn_helix, arabinose operon control protein ABE28_017400 SM00871 Bacterial transcription activator, effector binding domain ABE28_017420 SM00849 Metallo-beta-lactamase superfamily ABE28_017445 SM00046 Diacylglycerol kinase catalytic domain (presumed) ABE28_017575 SM01240 ABE28_017575 ABE28_017585 SM00448 cheY-homologous receiver domain ABE28_017585 SM00862 Transcriptional regulatory protein, C terminal ABE28_017590 SM00387 Histidine kinase-like ATPases ABE28_017595 SM00382 ATPases associated with a variety of cellular activities ABE28_017645 SM00382 ATPases associated with a variety of cellular activities ABE28_017650 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_017650 SM01134 ABE28_017650 ABE28_017670 SM00420 helix_turn_helix, Deoxyribose operon repressor ABE28_017675 SM00363 S4 RNA-binding domain ABE28_017715 SM00450 Rhodanese Homology Domain ABE28_017735 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_017815 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_017815 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_017835 SM00854 Bacterial capsule synthesis protein PGA_cap ABE28_017850 SM00257 Lysin motif ABE28_017865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_017865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_017905 SM00966 SpoVT / AbrB like domain ABE28_017930 SM00487 DEAD-like helicases superfamily ABE28_017930 SM00490 helicase superfamily c-terminal domain ABE28_017960 SM00014 Acid phosphatase homologues ABE28_017980 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_018000 SM00382 ATPases associated with a variety of cellular activities ABE28_018030 SM00382 ATPases associated with a variety of cellular activities ABE28_018035 SM00382 ATPases associated with a variety of cellular activities ABE28_018060 SM00382 ATPases associated with a variety of cellular activities ABE28_018070 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_018070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_018105 SM00448 cheY-homologous receiver domain ABE28_018110 SM00387 Histidine kinase-like ATPases ABE28_018115 SM00478 endonuclease III ABE28_018120 SM00342 helix_turn_helix, arabinose operon control protein ABE28_018160 SM00422 helix_turn_helix, mercury resistance ABE28_018230 SM00421 helix_turn_helix, Lux Regulon ABE28_018230 SM00448 cheY-homologous receiver domain ABE28_018235 SM00387 Histidine kinase-like ATPases ABE28_018290 SM00849 Metallo-beta-lactamase superfamily ABE28_018295 SM00155 Phospholipase D. Active site motifs. ABE28_018320 SM00835 Cupin ABE28_018340 SM00382 ATPases associated with a variety of cellular activities ABE28_018350 SM01022 ABE28_018350 ABE28_018420 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain ABE28_018445 SM00882 Coenzyme A transferase ABE28_018450 SM00882 Coenzyme A transferase ABE28_018480 SM00382 ATPases associated with a variety of cellular activities ABE28_018495 SM00882 Coenzyme A transferase ABE28_018500 SM00882 Coenzyme A transferase ABE28_018510 SM00382 ATPases associated with a variety of cellular activities ABE28_018610 SM00829 Enoylreductase ABE28_018635 SM00257 Lysin motif ABE28_018665 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_018665 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_018670 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_018695 SM00487 DEAD-like helicases superfamily ABE28_018695 SM00490 helicase superfamily c-terminal domain ABE28_018710 SM00530 Helix-turn-helix XRE-family like proteins ABE28_018735 SM00248 ankyrin repeats ABE28_018740 SM00248 ankyrin repeats ABE28_018750 SM00530 Helix-turn-helix XRE-family like proteins ABE28_018775 SM00248 ankyrin repeats ABE28_018780 SM00248 ankyrin repeats ABE28_018800 SM00382 ATPases associated with a variety of cellular activities ABE28_018810 SM00382 ATPases associated with a variety of cellular activities ABE28_018830 SM00382 ATPases associated with a variety of cellular activities ABE28_018855 SM00387 Histidine kinase-like ATPases ABE28_018855 SM00388 His Kinase A (phosphoacceptor) domain ABE28_018860 SM00382 ATPases associated with a variety of cellular activities ABE28_018875 SM00894 Excalibur calcium-binding domain ABE28_018925 SM00858 ABE28_018925 ABE28_018945 SM01130 ABE28_018945 ABE28_018955 SM00346 helix_turn_helix isocitrate lyase regulation ABE28_019085 SM00014 Acid phosphatase homologues ABE28_019110 SM00830 Chorismate mutase type II ABE28_019170 SM00382 ATPases associated with a variety of cellular activities ABE28_019170 SM00930 ABE28_019170 ABE28_019185 SM00829 Enoylreductase ABE28_019255 SM00354 helix_turn _helix lactose operon repressor ABE28_019300 SM00448 cheY-homologous receiver domain ABE28_019300 SM00850 LytTr DNA-binding domain ABE28_019305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABE28_019305 SM00387 Histidine kinase-like ATPases ABE28_019310 SM00533 DNA-binding domain of DNA mismatch repair MUTS family ABE28_019310 SM00534 ATPase domain of DNA mismatch repair MUTS family ABE28_019315 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. ABE28_019335 SM00382 ATPases associated with a variety of cellular activities ABE28_019455 SM00382 ATPases associated with a variety of cellular activities ABE28_019460 SM00382 ATPases associated with a variety of cellular activities ABE28_019470 SM00342 helix_turn_helix, arabinose operon control protein ABE28_019470 SM00448 cheY-homologous receiver domain ABE28_019490 SM00240 Forkhead associated domain ABE28_019490 SM00862 Transcriptional regulatory protein, C terminal ABE28_019535 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_019570 SM00364 Leucine-rich repeats, bacterial type ABE28_019570 SM00369 Leucine-rich repeats, typical (most populated) subfamily ABE28_019790 SM00530 Helix-turn-helix XRE-family like proteins ABE28_019850 SM00829 Enoylreductase ABE28_019880 SM00344 helix_turn_helix ASNC type ABE28_019905 SM00836 DALR anticodon binding domain ABE28_019905 SM01016 Arginyl tRNA synthetase N terminal dom ABE28_019910 SM00448 cheY-homologous receiver domain ABE28_019920 SM00257 Lysin motif ABE28_019920 SM00636 ABE28_019920 ABE28_019980 SM00382 ATPases associated with a variety of cellular activities ABE28_020040 SM00354 helix_turn _helix lactose operon repressor ABE28_020120 SM00382 ATPases associated with a variety of cellular activities ABE28_020140 SM00422 helix_turn_helix, mercury resistance ABE28_020155 SM00382 ATPases associated with a variety of cellular activities ABE28_020240 SM00047 Lysozyme subfamily 2 ABE28_020240 SM00287 Bacterial SH3 domain homologues ABE28_020260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_020330 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_020350 SM00382 ATPases associated with a variety of cellular activities ABE28_020355 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_020365 SM00382 ATPases associated with a variety of cellular activities ABE28_020415 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_020415 SM00876 Biotin and Thiamin Synthesis associated domain ABE28_020530 SM00327 von Willebrand factor (vWF) type A domain ABE28_020535 SM00382 ATPases associated with a variety of cellular activities ABE28_020605 SM00710 Parallel beta-helix repeats ABE28_020625 SM00860 SMI1 / KNR4 family ABE28_020630 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_020665 SM00984 UDP binding domain ABE28_020685 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_020685 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_020720 SM00857 Resolvase, N terminal domain ABE28_020730 SM00382 ATPases associated with a variety of cellular activities ABE28_020765 SM01234 ABE28_020765 ABE28_020780 SM00091 PAS domain ABE28_020780 SM00387 Histidine kinase-like ATPases ABE28_020785 SM00448 cheY-homologous receiver domain ABE28_020790 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain ABE28_021010 SM00849 Metallo-beta-lactamase superfamily ABE28_021080 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain ABE28_021120 SM00829 Enoylreductase ABE28_021150 SM00833 Cobalamin synthesis protein cobW C-terminal domain ABE28_021155 SM00465 GIY-YIG type nucleases (URI domain) ABE28_021165 SM00098 Alkaline phosphatase homologues ABE28_021180 SM00257 Lysin motif ABE28_021180 SM00631 ABE28_021180 ABE28_021185 SM01060 ABE28_021185 ABE28_021295 SM00257 Lysin motif ABE28_021295 SM00636 ABE28_021295 ABE28_021330 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_021335 SM00530 Helix-turn-helix XRE-family like proteins ABE28_021345 SM00344 helix_turn_helix ASNC type ABE28_021380 SM00382 ATPases associated with a variety of cellular activities ABE28_021400 SM00382 ATPases associated with a variety of cellular activities ABE28_021440 SM01298 ABE28_021440 ABE28_021445 SM00479 ABE28_021445 ABE28_021680 SM00729 Elongator protein 3, MiaB family, Radical SAM ABE28_021695 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_021745 SM00382 ATPases associated with a variety of cellular activities ABE28_021775 SM00382 ATPases associated with a variety of cellular activities ABE28_021775 SM00930 ABE28_021775 ABE28_021790 SM00493 ABE28_021790 ABE28_021860 SM00382 ATPases associated with a variety of cellular activities ABE28_021870 SM00354 helix_turn _helix lactose operon repressor ABE28_021880 SM00642 Alpha-amylase domain ABE28_021940 SM00382 ATPases associated with a variety of cellular activities ABE28_021960 SM00631 ABE28_021960 ABE28_021990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_021990 SM00387 Histidine kinase-like ATPases ABE28_021990 SM00388 His Kinase A (phosphoacceptor) domain ABE28_021995 SM00448 cheY-homologous receiver domain ABE28_021995 SM00862 Transcriptional regulatory protein, C terminal ABE28_022005 SM00421 helix_turn_helix, Lux Regulon ABE28_022005 SM00448 cheY-homologous receiver domain ABE28_022010 SM00387 Histidine kinase-like ATPases ABE28_022030 SM00926 Molybdopterin oxidoreductase Fe4S4 domain ABE28_022030 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABE28_022055 SM00382 ATPases associated with a variety of cellular activities ABE28_022080 SM00316 Ribosomal protein S1-like RNA-binding domain ABE28_022080 SM00357 Cold shock protein domain ABE28_022080 SM00955 ABE28_022080 ABE28_022125 SM01192 ABE28_022125 ABE28_022125 SM01193 ABE28_022125 ABE28_022145 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABE28_022205 SM00028 Tetratricopeptide repeats ABE28_022300 SM00382 ATPases associated with a variety of cellular activities ABE28_022305 SM00487 DEAD-like helicases superfamily ABE28_022305 SM00490 helicase superfamily c-terminal domain ABE28_022315 SM01060 ABE28_022315 ABE28_022325 SM00867 YceI-like domain ABE28_022345 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_022350 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_022350 SM00245 tail specific protease ABE28_022365 SM00382 ATPases associated with a variety of cellular activities ABE28_022380 SM00937 ABE28_022380 ABE28_022385 SM00957 SecA DEAD-like domain ABE28_022385 SM00958 SecA preprotein cross-linking domain ABE28_022390 SM00530 Helix-turn-helix XRE-family like proteins ABE28_022490 SM00421 helix_turn_helix, Lux Regulon ABE28_022490 SM00448 cheY-homologous receiver domain ABE28_022495 SM00387 Histidine kinase-like ATPases ABE28_022540 SM00382 ATPases associated with a variety of cellular activities ABE28_022570 SM00257 Lysin motif ABE28_022590 SM00490 helicase superfamily c-terminal domain ABE28_022590 SM00957 SecA DEAD-like domain ABE28_022590 SM00958 SecA preprotein cross-linking domain ABE28_022600 SM00098 Alkaline phosphatase homologues ABE28_022625 SM00530 Helix-turn-helix XRE-family like proteins ABE28_022635 SM00487 DEAD-like helicases superfamily ABE28_022635 SM00490 helicase superfamily c-terminal domain ABE28_022645 SM00345 helix_turn_helix gluconate operon transcriptional repressor ABE28_022680 SM00382 ATPases associated with a variety of cellular activities ABE28_022685 SM00382 ATPases associated with a variety of cellular activities ABE28_022830 SM00382 ATPases associated with a variety of cellular activities ABE28_022900 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). ABE28_022900 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_022905 SM00226 Low molecular weight phosphatase family ABE28_022930 SM00937 ABE28_022930 ABE28_022950 SM00357 Cold shock protein domain ABE28_022950 SM00382 ATPases associated with a variety of cellular activities ABE28_022950 SM00959 Rho termination factor, N-terminal domain ABE28_022975 SM00448 cheY-homologous receiver domain ABE28_023030 SM00155 Phospholipase D. Active site motifs. ABE28_023040 SM00836 DALR anticodon binding domain ABE28_023040 SM01016 Arginyl tRNA synthetase N terminal dom ABE28_023085 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_023130 SM00986 Uracil DNA glycosylase superfamily ABE28_023130 SM00987 UreE urease accessory protein, C-terminal domain ABE28_023185 SM00347 helix_turn_helix multiple antibiotic resistance protein ABE28_023235 SM00855 Phosphoglycerate mutase family ABE28_023260 SM00382 ATPases associated with a variety of cellular activities ABE28_023290 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain ABE28_023290 SM00437 Bacterial DNA topoisomerase I DNA-binding domain ABE28_023290 SM00493 ABE28_023290 ABE28_023300 SM00382 ATPases associated with a variety of cellular activities ABE28_023325 SM00382 ATPases associated with a variety of cellular activities ABE28_023345 SM00487 DEAD-like helicases superfamily ABE28_023345 SM00490 helicase superfamily c-terminal domain ABE28_023400 SM00062 Bacterial periplasmic substrate-binding proteins ABE28_023400 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. ABE28_023410 SM00382 ATPases associated with a variety of cellular activities ABE28_023440 SM00387 Histidine kinase-like ATPases ABE28_023440 SM00388 His Kinase A (phosphoacceptor) domain ABE28_023445 SM00448 cheY-homologous receiver domain ABE28_023445 SM00862 Transcriptional regulatory protein, C terminal ABE28_023455 SM00382 ATPases associated with a variety of cellular activities ABE28_023515 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase ABE28_023525 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABE28_023540 SM00382 ATPases associated with a variety of cellular activities ABE28_023555 SM00354 helix_turn _helix lactose operon repressor ABE28_023570 SM01006 Siderophore biosynthesis protein domain ABE28_023605 SM00642 Alpha-amylase domain ABE28_023615 SM01060 ABE28_023615 ABE28_023620 SM00487 DEAD-like helicases superfamily ABE28_023620 SM00490 helicase superfamily c-terminal domain ABE28_023640 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. ABE28_023645 SM00849 Metallo-beta-lactamase superfamily ABE28_023660 SM00091 PAS domain ABE28_023660 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain ABE28_023660 SM00387 Histidine kinase-like ATPases ABE28_023660 SM00388 His Kinase A (phosphoacceptor) domain ABE28_023665 SM00448 cheY-homologous receiver domain ABE28_023665 SM00862 Transcriptional regulatory protein, C terminal ABE28_023670 SM01208 ABE28_023670 ABE28_023695 SM00788 Adenylosuccinate synthetase ABE28_023710 SM00267 diguanylate cyclase ABE28_023760 SM00470 ParB-like nuclease domain ABE28_023770 SM00470 ParB-like nuclease domain ABE28_023780 SM01228 ABE28_023780 ABE28_023790 SM00393 Putative single-stranded nucleic acids-binding domain ABE28_023790 SM01245 ABE28_023790 ABE28_023805 SM00382 ATPases associated with a variety of cellular activities ABE28_023805 SM00760 Bacterial dnaA protein helix-turn-helix domain ABE28_023810 SM00480 DNA polymerase III beta subunit ABE28_023830 SM00387 Histidine kinase-like ATPases ABE28_023830 SM00433 TopoisomeraseII ABE28_023835 SM00434 DNA Topoisomerase IV ABE28_023840 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. ABE28_023930 SM00244 prohibitin homologues ABE28_023955 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor ABE28_023970 SM00382 ATPases associated with a variety of cellular activities ABE28_024015 SM00530 Helix-turn-helix XRE-family like proteins ABE28_024020 SM00342 helix_turn_helix, arabinose operon control protein ABE28_024175 SM00257 Lysin motif ABE28_024175 SM00287 Bacterial SH3 domain homologues