ABE28_012055 fa4b41464966142eed49870a19cdda42 204 Gene3D G3DSA:3.40.50.720 1 127 1.8E-40 T 11-10-2018 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 Gene3D G3DSA:1.10.8.610 128 200 7.9E-24 T 11-10-2018 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 Pfam PF14824 Sirohaem biosynthesis protein central 116 140 4.4E-9 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 172 5.6E-35 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 SUPERFAMILY SSF75615 105 178 3.79E-16 T 11-10-2018 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 Pfam PF13241 Putative NAD(P)-binding 4 112 2.4E-25 T 11-10-2018 ABE28_012055 fa4b41464966142eed49870a19cdda42 204 SUPERFAMILY SSF51735 1 108 3.66E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016405 83cde3ec1aff1e015d30727f445c35a3 247 Pfam PF01478 Type IV leader peptidase family 101 204 1.9E-19 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 ABE28_016405 83cde3ec1aff1e015d30727f445c35a3 247 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 7 85 1.4E-26 T 11-10-2018 IPR010627 Peptidase A24A, N-terminal ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 SUPERFAMILY SSF54909 65 120 1.09E-5 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 SUPERFAMILY SSF46785 2 63 9.11E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 Gene3D G3DSA:3.30.70.920 83 124 1.6E-6 T 11-10-2018 ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 8.0E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 Gene3D G3DSA:1.10.10.10 1 50 8.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 SMART SM00344 3 92 4.3E-27 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005415 b4e68f8efff1287424f7fd5dd3aad38c 125 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.0E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005475 3d6ec8716552a513558f525e5c351464 155 SUPERFAMILY SSF54631 1 151 1.39E-32 T 11-10-2018 ABE28_005475 3d6ec8716552a513558f525e5c351464 155 Pfam PF00571 CBS domain 3 57 3.4E-16 T 11-10-2018 IPR000644 CBS domain ABE28_005475 3d6ec8716552a513558f525e5c351464 155 Pfam PF00571 CBS domain 97 147 4.0E-11 T 11-10-2018 IPR000644 CBS domain ABE28_005475 3d6ec8716552a513558f525e5c351464 155 Gene3D G3DSA:3.10.580.10 1 150 2.2E-34 T 11-10-2018 ABE28_005475 3d6ec8716552a513558f525e5c351464 155 SMART SM00116 10 58 6.1E-11 T 11-10-2018 IPR000644 CBS domain ABE28_005475 3d6ec8716552a513558f525e5c351464 155 SMART SM00116 99 147 1.8E-8 T 11-10-2018 IPR000644 CBS domain ABE28_018810 d4ccd0d530c94e3f6c3609932688b340 253 Gene3D G3DSA:3.40.50.300 2 246 5.2E-62 T 11-10-2018 ABE28_018810 d4ccd0d530c94e3f6c3609932688b340 253 SMART SM00382 27 212 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018810 d4ccd0d530c94e3f6c3609932688b340 253 SUPERFAMILY SSF52540 6 227 2.08E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018810 d4ccd0d530c94e3f6c3609932688b340 253 Pfam PF00005 ABC transporter 19 167 7.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018810 d4ccd0d530c94e3f6c3609932688b340 253 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 710 6.9E-192 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 SMART SM00437 273 552 8.7E-82 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Gene3D G3DSA:2.70.20.10 219 482 1.8E-155 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 SMART SM00493 1 130 1.2E-9 T 11-10-2018 IPR006171 TOPRIM domain ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 SUPERFAMILY SSF56712 1 602 5.76E-175 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Pfam PF01751 Toprim domain 3 138 1.3E-11 T 11-10-2018 IPR006171 TOPRIM domain ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Gene3D G3DSA:3.40.50.140 1 157 5.4E-51 T 11-10-2018 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Gene3D G3DSA:1.10.290.10 282 411 1.8E-155 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 310 324 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Gene3D G3DSA:1.10.460.10 164 597 1.8E-155 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Pfam PF01131 DNA topoisomerase 157 587 1.9E-124 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 515 529 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 397 413 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 315 324 2.4E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 Pfam PF13342 C-terminal repeat of topoisomerase 657 716 3.1E-18 T 11-10-2018 IPR025589 Topoisomerase C-terminal repeat ABE28_013485 66258a78c4f61d8090b5925cea9b11b1 724 SMART SM00436 130 225 7.5E-35 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 Pfam PF00107 Zinc-binding dehydrogenase 162 275 2.0E-13 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 SUPERFAMILY SSF50129 5 146 9.43E-42 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 SUPERFAMILY SSF51735 119 296 2.41E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 Gene3D G3DSA:3.90.180.10 20 329 6.2E-122 T 11-10-2018 ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 SMART SM00829 14 328 1.5E-7 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 7 330 4.0E-142 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 90 1.4E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_021120 b06c7594875a10f5de2cfeece39dbcc4 330 Gene3D G3DSA:3.40.50.720 129 297 6.2E-122 T 11-10-2018 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 SUPERFAMILY SSF75553 484 686 7.85E-54 T 11-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 PIRSF PIRSF005719 1 1185 0.0 T 11-10-2018 IPR024704 Structural maintenance of chromosomes protein ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Pfam PF06470 SMC proteins Flexible Hinge Domain 518 637 4.9E-28 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Gene3D G3DSA:3.40.50.300 948 1186 6.3E-53 T 11-10-2018 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Gene3D G3DSA:3.30.70.1620 578 667 8.7E-66 T 11-10-2018 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Gene3D G3DSA:1.20.1060.20 495 679 8.7E-66 T 11-10-2018 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1178 0.0 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1180 23.972 T 11-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Gene3D G3DSA:3.40.50.300 1 245 1.9E-57 T 11-10-2018 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 SMART SM00968 518 637 1.3E-38 T 11-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 SUPERFAMILY SSF52540 1 1179 2.82E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007805 48a403406cb057f8a1e39d1e6e50675e 1187 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 1171 4.0E-67 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABE28_014115 2d95b1593a62219424a7f0709cc41b3a 158 SUPERFAMILY SSF54403 95 155 8.42E-19 T 11-10-2018 ABE28_014115 2d95b1593a62219424a7f0709cc41b3a 158 SUPERFAMILY SSF54403 32 89 4.76E-14 T 11-10-2018 ABE28_014115 2d95b1593a62219424a7f0709cc41b3a 158 Gene3D G3DSA:3.10.450.40 81 156 1.5E-23 T 11-10-2018 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 SUPERFAMILY SSF53649 40 456 1.34E-125 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 Gene3D G3DSA:3.40.720.10 49 447 2.6E-144 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 Pfam PF00245 Alkaline phosphatase 45 455 1.6E-133 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 SMART SM00098 46 458 1.7E-198 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 PRINTS PR00113 Alkaline phosphatase signature 187 197 3.1E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 PRINTS PR00113 Alkaline phosphatase signature 253 282 3.1E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 PRINTS PR00113 Alkaline phosphatase signature 45 65 3.1E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 PRINTS PR00113 Alkaline phosphatase signature 100 115 3.1E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 PRINTS PR00113 Alkaline phosphatase signature 137 157 3.1E-44 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 ProSitePatterns PS00123 Alkaline phosphatase active site. 100 108 - T 11-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_021165 c4594fc6c40e3de492bd901b6309b03a 459 Gene3D G3DSA:1.10.60.40 329 417 2.6E-144 T 11-10-2018 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 Gene3D G3DSA:1.10.10.10 130 231 8.0E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 227 1.1E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 SUPERFAMILY SSF46894 129 228 5.67E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 Pfam PF00072 Response regulator receiver domain 5 115 8.5E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 SMART SM00862 152 227 5.3E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 SMART SM00448 3 114 3.7E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 Gene3D G3DSA:3.40.50.2300 1 123 5.5E-38 T 11-10-2018 ABE28_021995 041d0992dc8b21bd354fcf0621e7df81 231 SUPERFAMILY SSF52172 2 124 1.57E-39 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_015250 65e70b2fad6a6b5d76530fb000065600 320 SUPERFAMILY SSF53850 43 316 1.14E-74 T 11-10-2018 ABE28_015250 65e70b2fad6a6b5d76530fb000065600 320 Pfam PF12849 PBP superfamily domain 36 288 8.7E-35 T 11-10-2018 IPR024370 PBP domain ABE28_015250 65e70b2fad6a6b5d76530fb000065600 320 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 11 302 4.4E-93 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 ABE28_015250 65e70b2fad6a6b5d76530fb000065600 320 Gene3D G3DSA:3.40.190.10 124 264 2.7E-90 T 11-10-2018 ABE28_015250 65e70b2fad6a6b5d76530fb000065600 320 Gene3D G3DSA:3.40.190.10 46 301 2.7E-90 T 11-10-2018 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 SUPERFAMILY SSF52025 422 604 9.68E-26 T 11-10-2018 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 202 2.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 580 596 2.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 PRINTS PR00723 Subtilisin serine protease family (S8) signature 254 267 2.1E-16 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 258 268 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 SUPERFAMILY SSF52743 168 659 3.4E-62 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Gene3D G3DSA:3.50.30.30 397 581 5.8E-161 T 11-10-2018 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 581 591 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Pfam PF02225 PA domain 435 513 3.9E-15 T 11-10-2018 IPR003137 PA domain ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Pfam PF00082 Subtilase family 183 638 5.3E-57 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Pfam PF05922 Peptidase inhibitor I9 61 149 1.0E-6 T 11-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Gene3D G3DSA:2.60.40.1710 663 814 1.1E-35 T 11-10-2018 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Pfam PF06280 Fn3-like domain 674 805 8.3E-28 T 11-10-2018 IPR010435 Fn3-like domain GO:0004252|GO:0005618|GO:0016020 ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 188 199 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_022660 a48e89560df2b767b9f980e594607dea 1243 Gene3D G3DSA:3.40.50.200 182 654 5.8E-161 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 Gene3D G3DSA:3.40.50.10860 47 190 6.5E-63 T 11-10-2018 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 5.3E-75 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 SUPERFAMILY SSF51735 191 423 4.88E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 SUPERFAMILY SSF53223 15 193 3.2E-66 T 11-10-2018 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 2.4E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 2.4E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 2.4E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 2.4E-29 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 PIRSF PIRSF000185 11 424 2.8E-167 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 Gene3D G3DSA:3.40.50.720 191 424 6.7E-84 T 11-10-2018 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 46 173 2.0E-54 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 SMART SM00839 193 422 1.6E-91 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_017980 28522a66acc940e06e2cdcd68a2fd6aa 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_019240 32f56af03757d84de0f2be4f1739e6df 477 Gene3D G3DSA:3.40.605.10 30 463 6.6E-153 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_019240 32f56af03757d84de0f2be4f1739e6df 477 Pfam PF00171 Aldehyde dehydrogenase family 17 471 3.3E-155 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_019240 32f56af03757d84de0f2be4f1739e6df 477 SUPERFAMILY SSF53720 9 475 1.44E-144 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_019240 32f56af03757d84de0f2be4f1739e6df 477 Gene3D G3DSA:3.40.309.10 255 443 6.6E-153 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Pfam PF13155 Toprim-like 266 351 2.6E-19 T 11-10-2018 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Pfam PF01807 CHC2 zinc finger 7 101 1.1E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Gene3D G3DSA:1.10.860.10 466 563 2.7E-32 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 SUPERFAMILY SSF57783 5 100 1.55E-36 T 11-10-2018 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 PIRSF PIRSF002811 3 602 3.4E-188 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Gene3D G3DSA:3.40.1360.10 245 366 1.5E-38 T 11-10-2018 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 TIGRFAM TIGR01391 dnaG: DNA primase 5 420 2.2E-151 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Hamap MF_00974 DNA primase [dnaG]. 5 593 29.559 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Gene3D G3DSA:3.90.580.10 2 103 1.5E-40 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 SMART SM00400 37 91 2.9E-32 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Pfam PF10410 DnaB-helicase binding domain of primase 372 425 4.5E-13 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 SUPERFAMILY SSF56731 118 426 2.49E-104 T 11-10-2018 ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Gene3D G3DSA:3.90.980.10 113 244 1.0E-50 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 Pfam PF08275 DNA primase catalytic core, N-terminal domain 129 255 3.0E-45 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 SMART SM00493 263 334 1.6E-16 T 11-10-2018 IPR006171 TOPRIM domain ABE28_015370 2bfd52b85c2f9b5ef173548ddb6ba730 602 SUPERFAMILY SSF48024 462 560 3.4E-8 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ABE28_011140 f7fffd2121940c1ee4f7e26995aac783 465 Gene3D G3DSA:1.20.1250.20 33 448 9.6E-26 T 11-10-2018 ABE28_011140 f7fffd2121940c1ee4f7e26995aac783 465 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 25 460 3.0E-146 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ABE28_011140 f7fffd2121940c1ee4f7e26995aac783 465 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 76 103 - T 11-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 ABE28_011140 f7fffd2121940c1ee4f7e26995aac783 465 Pfam PF13347 MFS/sugar transport protein 27 447 2.9E-98 T 11-10-2018 ABE28_011140 f7fffd2121940c1ee4f7e26995aac783 465 SUPERFAMILY SSF103473 27 444 1.07E-38 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_021700 a1c729bc882031f3bc85d40b3b670459 100 SUPERFAMILY SSF102891 2 99 5.62E-31 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily ABE28_021700 a1c729bc882031f3bc85d40b3b670459 100 Gene3D G3DSA:3.30.1980.10 1 100 6.6E-23 T 11-10-2018 IPR036493 Hypothetical protein YunC superfamily ABE28_021700 a1c729bc882031f3bc85d40b3b670459 100 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 5.8E-23 T 11-10-2018 IPR014931 Protein of unknown function DUF1805 ABE28_018685 6ad423e5d35626d87b340376ba89799c 1022 SUPERFAMILY SSF52540 267 996 2.18E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018685 6ad423e5d35626d87b340376ba89799c 1022 Gene3D G3DSA:3.40.50.300 832 1018 7.5E-25 T 11-10-2018 ABE28_018685 6ad423e5d35626d87b340376ba89799c 1022 Gene3D G3DSA:3.40.50.300 659 791 2.2E-9 T 11-10-2018 ABE28_018685 6ad423e5d35626d87b340376ba89799c 1022 Pfam PF13087 AAA domain 877 992 1.9E-13 T 11-10-2018 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 Gene3D G3DSA:3.30.420.80 1 129 1.8E-54 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 34.397 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 SUPERFAMILY SSF53137 14 129 4.38E-50 T 11-10-2018 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 PIRSF PIRSF002131 1 129 3.7E-54 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 Pfam PF00411 Ribosomal protein S11 19 128 2.3E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 ABE28_000710 dbaeca47b73520a7aa61fc031150e8b9 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 5.2E-59 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 PRINTS PR00095 Anthranilate synthase component I signature 213 226 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 PRINTS PR00095 Anthranilate synthase component I signature 307 321 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 PRINTS PR00095 Anthranilate synthase component I signature 322 336 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 PRINTS PR00095 Anthranilate synthase component I signature 227 240 1.1E-9 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 SUPERFAMILY SSF56752 349 577 3.14E-40 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 Gene3D G3DSA:3.60.120.10 9 369 3.4E-113 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 Pfam PF01063 Amino-transferase class IV 380 578 9.1E-31 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 SUPERFAMILY SSF56322 38 371 3.92E-107 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 Pfam PF00425 chorismate binding enzyme 112 367 2.2E-88 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 Gene3D G3DSA:3.30.470.10 370 450 6.9E-17 T 11-10-2018 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 Gene3D G3DSA:3.20.10.10 455 580 6.1E-33 T 11-10-2018 ABE28_012125 79baff4f587d749046dc9d92641c3f12 581 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 56 370 2.2E-112 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 ABE28_012160 d06e5432e1684c324df290a888449e48 83 Gene3D G3DSA:1.10.8.910 26 83 3.3E-10 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily ABE28_012160 d06e5432e1684c324df290a888449e48 83 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 80 1.7E-19 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SUPERFAMILY SSF54106 52 97 2.49E-9 T 11-10-2018 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Gene3D G3DSA:3.40.630.10 105 396 2.5E-48 T 11-10-2018 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Pfam PF01476 LysM domain 5 46 3.5E-6 T 11-10-2018 IPR018392 LysM domain ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Pfam PF01476 LysM domain 53 96 3.5E-9 T 11-10-2018 IPR018392 LysM domain ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SUPERFAMILY SSF53187 108 393 8.27E-51 T 11-10-2018 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 153 175 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Gene3D G3DSA:3.10.350.10 2 46 6.5E-8 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Gene3D G3DSA:3.10.350.10 50 96 1.6E-14 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SMART SM00257 52 96 9.3E-13 T 11-10-2018 IPR018392 LysM domain ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SMART SM00257 2 46 2.5E-6 T 11-10-2018 IPR018392 LysM domain ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SMART SM00631 109 386 9.9E-11 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 Pfam PF00246 Zinc carboxypeptidase 125 383 1.1E-27 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021180 b0a077492cb545fdaca03aea15ade53f 397 SUPERFAMILY SSF54106 4 46 9.42E-5 T 11-10-2018 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 Pfam PF04055 Radical SAM superfamily 19 183 5.6E-30 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 Gene3D G3DSA:3.20.20.70 2 338 3.4E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 338 40.779 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 SMART SM00729 14 222 9.5E-14 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 Pfam PF13353 4Fe-4S single cluster domain 22 113 8.2E-8 T 11-10-2018 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 338 2.7E-119 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 190 316 2.1E-36 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002900 5fb2e0d92b9937c9ce3c843e78de6e0f 338 SUPERFAMILY SSF102114 6 309 4.45E-79 T 11-10-2018 ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 Gene3D G3DSA:3.10.105.10 276 495 1.4E-146 T 11-10-2018 ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 PIRSF PIRSF002741 6 521 1.5E-126 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 Gene3D G3DSA:3.40.190.10 202 505 1.4E-146 T 11-10-2018 ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 439 3.5E-102 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 Gene3D G3DSA:3.90.76.10 53 201 1.4E-146 T 11-10-2018 ABE28_019425 ce6eb2735444f59b3fcfbdf88d647f41 521 SUPERFAMILY SSF53850 41 520 3.26E-147 T 11-10-2018 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 4 128 9.0E-35 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 PIRSF PIRSF000161 2 266 2.1E-71 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 Gene3D G3DSA:3.30.360.10 130 235 2.1E-77 T 11-10-2018 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 4 266 30.04 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 131 264 8.9E-33 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 Gene3D G3DSA:3.40.50.720 5 263 2.1E-77 T 11-10-2018 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 SUPERFAMILY SSF55347 129 237 3.71E-39 T 11-10-2018 ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 SUPERFAMILY SSF51735 3 154 5.05E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014170 a7f6dbce6b671d08467b93af0ee58f1e 266 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 4 266 1.5E-86 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_018145 cacf8f904ad6f6bb98a55dbcfbea3e43 227 SUPERFAMILY SSF110395 1 208 1.83E-55 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 ABE28_018145 cacf8f904ad6f6bb98a55dbcfbea3e43 227 Gene3D G3DSA:3.20.20.380 2 227 5.0E-70 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 ABE28_018145 cacf8f904ad6f6bb98a55dbcfbea3e43 227 Pfam PF03932 CutC family 2 198 2.0E-49 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 ABE28_018145 cacf8f904ad6f6bb98a55dbcfbea3e43 227 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 1 203 25.082 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 Gene3D G3DSA:2.40.180.10 3 484 2.1E-232 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 Pfam PF00199 Catalase 8 389 1.4E-198 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PIRSF PIRSF038928 1 481 1.6E-231 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 334 342 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 SMART SM01060 8 392 1.6E-297 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 289 316 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 21 44 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 321 347 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 105 122 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 124 142 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 PRINTS PR00067 Catalase signature 84 102 2.8E-76 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 SUPERFAMILY SSF56634 3 482 1.05E-218 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 ProSitePatterns PS00438 Catalase proximal active site signature. 44 60 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021185 5048daf2b52b89d6996d8422bd6ec859 484 Pfam PF06628 Catalase-related immune-responsive 415 476 1.9E-24 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_004150 38f7179da197e6138dcdf840e7c450b3 85 Pfam PF03795 YCII-related domain 6 82 3.1E-11 T 11-10-2018 IPR005545 YCII-related ABE28_004150 38f7179da197e6138dcdf840e7c450b3 85 SUPERFAMILY SSF54909 1 83 2.09E-16 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_004150 38f7179da197e6138dcdf840e7c450b3 85 Gene3D G3DSA:3.30.70.1060 4 84 2.3E-8 T 11-10-2018 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.6E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 SMART SM01134 73 233 2.1E-72 T 11-10-2018 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 Gene3D G3DSA:1.10.10.10 1 58 4.4E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001650 6a88b548210958a5d538678f80c64af6 257 SUPERFAMILY SSF46785 4 60 1.27E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001650 6a88b548210958a5d538678f80c64af6 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.1E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.1E-10 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 Pfam PF00455 DeoR C terminal sensor domain 78 231 2.2E-53 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ABE28_001650 6a88b548210958a5d538678f80c64af6 257 SMART SM00420 6 58 2.7E-19 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_001650 6a88b548210958a5d538678f80c64af6 257 SUPERFAMILY SSF100950 78 232 8.37E-35 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_007345 3e52f1660a415edf7648ea274c31fec8 341 Pfam PF14504 CAP-associated N-terminal 57 196 1.9E-50 T 11-10-2018 IPR029410 CAP-associated domain ABE28_007345 3e52f1660a415edf7648ea274c31fec8 341 SUPERFAMILY SSF55797 220 338 2.09E-16 T 11-10-2018 IPR035940 CAP superfamily ABE28_007345 3e52f1660a415edf7648ea274c31fec8 341 Gene3D G3DSA:3.40.33.10 22 341 5.1E-99 T 11-10-2018 IPR035940 CAP superfamily ABE28_007345 3e52f1660a415edf7648ea274c31fec8 341 Pfam PF00188 Cysteine-rich secretory protein family 228 337 5.4E-12 T 11-10-2018 IPR014044 CAP domain ABE28_018515 4d557a1aad99349149d75a6651b37887 391 Gene3D G3DSA:3.40.47.10 6 275 1.1E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 Gene3D G3DSA:3.40.47.10 126 389 1.1E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 SUPERFAMILY SSF53901 3 269 5.76E-91 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 PIRSF PIRSF000429 1 391 1.1E-137 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.6E-52 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 SUPERFAMILY SSF53901 271 391 7.68E-45 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 3.7E-150 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 Pfam PF00108 Thiolase, N-terminal domain 4 262 1.3E-102 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_018515 4d557a1aad99349149d75a6651b37887 391 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_000790 5de10f36d2dbabea001d09a6d79ceeb2 227 PIRSF PIRSF029886 1 198 3.1E-74 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 ABE28_000790 5de10f36d2dbabea001d09a6d79ceeb2 227 SMART SM01251 17 195 2.2E-95 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 ABE28_000790 5de10f36d2dbabea001d09a6d79ceeb2 227 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 194 2.2E-72 T 11-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SUPERFAMILY SSF47781 555 630 4.45E-17 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SMART SM00316 647 718 8.3E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Pfam PF16921 Tex protein YqgF-like domain 321 446 3.2E-56 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Pfam PF09371 Tex-like protein N-terminal domain 12 196 3.5E-71 T 11-10-2018 IPR018974 Tex-like protein, N-terminal ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Gene3D G3DSA:2.40.50.140 630 720 4.4E-25 T 11-10-2018 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Pfam PF12836 Helix-hairpin-helix motif 486 550 9.1E-26 T 11-10-2018 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SUPERFAMILY SSF47781 465 551 1.56E-25 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SMART SM00732 321 419 7.0E-34 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Gene3D G3DSA:1.10.3500.10 115 493 2.7E-151 T 11-10-2018 IPR023323 Tex-like domain superfamily ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Gene3D G3DSA:3.30.420.140 320 446 2.7E-151 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SUPERFAMILY SSF53098 317 464 1.52E-49 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Gene3D G3DSA:1.10.10.650 1 112 1.3E-39 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Pfam PF00575 S1 RNA binding domain 646 717 1.5E-17 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 Gene3D G3DSA:1.10.150.310 494 628 3.0E-47 T 11-10-2018 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SUPERFAMILY SSF158832 7 316 1.03E-112 T 11-10-2018 ABE28_001440 d061d3c90fdb762c3e61131f73ea0866 724 SUPERFAMILY SSF50249 633 722 1.86E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 SUPERFAMILY SSF47240 5 146 1.01E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 ProSitePatterns PS00819 Dps protein family signature 2. 54 68 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 Gene3D G3DSA:1.20.1260.10 1 144 2.1E-52 T 11-10-2018 IPR012347 Ferritin-like ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 1.9E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 1.9E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 1.9E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 PIRSF PIRSF005900 1 146 3.0E-45 T 11-10-2018 IPR002177 DNA-binding protein Dps ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 ABE28_020755 9cfb681c0db3b36a811f35018bc31442 146 Pfam PF00210 Ferritin-like domain 8 145 6.3E-30 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Gene3D G3DSA:1.10.390.10 380 541 2.5E-70 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Pfam PF07504 Fungalysin/Thermolysin Propeptide Motif 83 132 2.4E-14 T 11-10-2018 IPR011096 FTP domain ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Gene3D G3DSA:3.10.450.490 69 142 8.3E-6 T 11-10-2018 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Gene3D G3DSA:3.10.170.10 229 379 2.3E-60 T 11-10-2018 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 330 350 2.6E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 387 398 2.6E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 366 382 2.6E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 456 472 2.6E-29 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Pfam PF03413 Peptidase propeptide and YPEB domain 149 218 1.4E-9 T 11-10-2018 IPR025711 PepSY domain ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 378 541 3.3E-65 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 SUPERFAMILY SSF55486 226 542 2.01E-106 T 11-10-2018 ABE28_021070 048e39f7528eab9c212306fc28dbd032 542 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 231 375 4.5E-51 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 ABE28_023765 93208695e2c642b67d464e542ab662e4 253 Gene3D G3DSA:3.40.50.300 1 252 3.2E-82 T 11-10-2018 ABE28_023765 93208695e2c642b67d464e542ab662e4 253 Pfam PF13614 AAA domain 2 178 3.1E-71 T 11-10-2018 IPR025669 AAA domain ABE28_023765 93208695e2c642b67d464e542ab662e4 253 SUPERFAMILY SSF52540 3 251 3.86E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018105 05e252a18e0f2ae84b00feb9c8c011d2 230 Gene3D G3DSA:3.40.50.12740 4 216 1.3E-29 T 11-10-2018 ABE28_018105 05e252a18e0f2ae84b00feb9c8c011d2 230 SUPERFAMILY SSF52172 4 133 6.97E-29 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_018105 05e252a18e0f2ae84b00feb9c8c011d2 230 Pfam PF00072 Response regulator receiver domain 7 116 1.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_018105 05e252a18e0f2ae84b00feb9c8c011d2 230 PIRSF PIRSF006171 2 230 8.9E-74 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 ABE28_018105 05e252a18e0f2ae84b00feb9c8c011d2 230 SMART SM00448 4 117 2.1E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002375 1cb8bde5e6f1d61443ff9e637f182d50 186 Pfam PF00881 Nitroreductase family 7 165 1.1E-28 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_002375 1cb8bde5e6f1d61443ff9e637f182d50 186 Gene3D G3DSA:3.40.109.10 1 186 1.3E-46 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_002375 1cb8bde5e6f1d61443ff9e637f182d50 186 PIRSF PIRSF000232 1 186 1.3E-46 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ABE28_002375 1cb8bde5e6f1d61443ff9e637f182d50 186 SUPERFAMILY SSF55469 1 183 7.72E-38 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_006680 95641f72eda5ed18af04163c525ec66a 321 SUPERFAMILY SSF161098 94 302 6.54E-18 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006680 95641f72eda5ed18af04163c525ec66a 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 319 1.8E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_006680 95641f72eda5ed18af04163c525ec66a 321 Gene3D G3DSA:1.10.3720.10 86 315 2.5E-20 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_016605 e091b2b7c690f2f5588c4096fd5ba282 208 Pfam PF00005 ABC transporter 17 157 1.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_016605 e091b2b7c690f2f5588c4096fd5ba282 208 SUPERFAMILY SSF52540 2 208 9.12E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016605 e091b2b7c690f2f5588c4096fd5ba282 208 Gene3D G3DSA:3.40.50.300 1 208 2.6E-54 T 11-10-2018 ABE28_016605 e091b2b7c690f2f5588c4096fd5ba282 208 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_016605 e091b2b7c690f2f5588c4096fd5ba282 208 SMART SM00382 26 204 1.6E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005260 bca07baaf5a5237cc98e2a0fdfa70ad4 210 SUPERFAMILY SSF49329 53 204 1.57E-42 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABE28_005260 bca07baaf5a5237cc98e2a0fdfa70ad4 210 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 59 204 8.0E-34 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABE28_005260 bca07baaf5a5237cc98e2a0fdfa70ad4 210 Gene3D G3DSA:2.60.40.200 49 205 1.6E-46 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABE28_005260 bca07baaf5a5237cc98e2a0fdfa70ad4 210 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 193 204 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 ABE28_010580 19010d01489c66034114a52f5427d8ce 251 Gene3D G3DSA:1.10.10.10 4 75 8.1E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010580 19010d01489c66034114a52f5427d8ce 251 Pfam PF01614 Bacterial transcriptional regulator 121 244 3.3E-29 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABE28_010580 19010d01489c66034114a52f5427d8ce 251 SMART SM00346 5 93 1.9E-25 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_010580 19010d01489c66034114a52f5427d8ce 251 SUPERFAMILY SSF55781 61 247 1.11E-40 T 11-10-2018 ABE28_010580 19010d01489c66034114a52f5427d8ce 251 Pfam PF09339 IclR helix-turn-helix domain 7 56 2.5E-10 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_010580 19010d01489c66034114a52f5427d8ce 251 Gene3D G3DSA:3.30.450.40 76 250 1.0E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_010580 19010d01489c66034114a52f5427d8ce 251 SUPERFAMILY SSF46785 6 76 3.36E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020280 dd7d6c50241083487027fb0d78155764 133 PIRSF PIRSF021700 1 132 3.3E-42 T 11-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase ABE28_020280 dd7d6c50241083487027fb0d78155764 133 Gene3D G3DSA:3.30.720.110 72 132 1.1E-30 T 11-10-2018 ABE28_020280 dd7d6c50241083487027fb0d78155764 133 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 3 128 4.3E-40 T 11-10-2018 IPR028973 PhnB-like ABE28_020280 dd7d6c50241083487027fb0d78155764 133 SUPERFAMILY SSF54593 1 131 1.6E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020280 dd7d6c50241083487027fb0d78155764 133 Gene3D G3DSA:3.30.720.100 7 71 2.0E-28 T 11-10-2018 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Gene3D G3DSA:3.60.20.10 2 239 6.3E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 SUPERFAMILY SSF56235 2 234 2.14E-64 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 SUPERFAMILY SSF53697 244 600 2.04E-94 T 11-10-2018 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.513 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 7.5E-229 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Gene3D G3DSA:3.40.50.10490 444 600 3.0E-62 T 11-10-2018 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Gene3D G3DSA:3.40.50.10490 243 443 1.5E-62 T 11-10-2018 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Pfam PF01380 SIS domain 288 413 2.6E-35 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Pfam PF01380 SIS domain 457 582 2.9E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_000900 f5b81bcdef7fdee32b6e9e2b1a683f02 600 Pfam PF13522 Glutamine amidotransferase domain 65 192 8.0E-22 T 11-10-2018 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 SUPERFAMILY SSF103190 81 178 9.94E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 4.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 454 4.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 4.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 440 4.5E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 SUPERFAMILY SSF55874 348 493 6.42E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Gene3D G3DSA:3.30.450.20 48 223 1.0E-34 T 11-10-2018 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 SMART SM00388 282 347 2.0E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Gene3D G3DSA:3.30.565.10 348 497 4.0E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 284 343 9.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 SMART SM00387 389 495 9.7E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Gene3D G3DSA:3.30.450.20 71 172 1.0E-34 T 11-10-2018 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 SUPERFAMILY SSF47384 277 343 4.12E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Gene3D G3DSA:1.10.287.130 285 344 1.7E-15 T 11-10-2018 ABE28_006920 c86a3b0747b790c270266fb1f7bf00fb 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 392 493 3.9E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 492 556 1.4E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 766 831 0.31 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 116 178 2.4E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 417 479 1.4E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 569 633 1.5E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 342 404 1.4E-15 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 647 712 4.8E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 191 255 1.6E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 37 101 1.1E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00287 268 330 2.5E-14 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:1.10.530.10 873 1014 1.3E-5 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 268 331 2.2E-16 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 648 713 2.1E-16 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 342 408 1.2E-16 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 191 260 3.3E-16 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 569 634 2.1E-15 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 SMART SM00047 865 1017 1.8E-44 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 493 552 1.3E-15 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 115 174 3.4E-15 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 38 97 3.9E-16 T 11-10-2018 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 580 630 9.0E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 425 476 6.7E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 202 252 1.7E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 350 401 9.9E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 276 327 2.2E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 48 98 2.8E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 504 553 1.7E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 658 709 1.1E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF08239 Bacterial SH3 domain 125 175 2.1E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 878 1009 1.4E-11 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_020240 aaef689dcc1995c1932317e8b5df8626 1026 Gene3D G3DSA:2.30.30.40 409 479 5.8E-15 T 11-10-2018 ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 Pfam PF01979 Amidohydrolase family 49 437 2.3E-28 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 Gene3D G3DSA:3.20.20.140 53 424 2.7E-191 T 11-10-2018 ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 Gene3D G3DSA:2.30.40.10 4 456 2.7E-191 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 455 5.1E-203 T 11-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 SUPERFAMILY SSF51556 53 383 7.49E-112 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_001020 e8394a7e13a36c490faa610f0fb2d6f5 472 SUPERFAMILY SSF51338 1 455 6.03E-36 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 47 72 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 236 252 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 122 140 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 266 285 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 379 397 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 140 159 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 403 421 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 449 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 458 475 4.8E-65 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 Pfam PF01019 Gamma-glutamyltranspeptidase 40 552 5.2E-148 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 Gene3D G3DSA:3.60.20.40 379 556 5.5E-60 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 Gene3D G3DSA:1.10.246.130 252 378 6.8E-37 T 11-10-2018 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 25 550 4.2E-165 T 11-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 ABE28_013400 d2d1dfa1ac3c3a873b16b422936d978e 564 SUPERFAMILY SSF56235 17 557 9.07E-161 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 SUPERFAMILY SSF52402 193 411 2.43E-63 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Gene3D G3DSA:3.30.300.10 399 518 6.7E-52 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 SUPERFAMILY SSF54810 398 518 6.41E-51 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Pfam PF00117 Glutamine amidotransferase class-I 15 195 4.7E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Pfam PF00958 GMP synthase C terminal domain 426 517 3.8E-45 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 14 201 4.6E-81 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Pfam PF02540 NAD synthase 217 260 9.8E-6 T 11-10-2018 IPR022310 NAD/GMP synthase ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 14 28 5.9E-7 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 85 101 5.9E-7 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 55 69 5.9E-7 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 SUPERFAMILY SSF52317 12 206 3.4E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Gene3D G3DSA:3.40.50.880 6 201 8.7E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 208 518 2.0E-158 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Gene3D G3DSA:3.40.50.620 205 398 8.0E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 11 518 55.104 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 58 67 1.0E-6 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 85 96 1.0E-6 T 11-10-2018 ABE28_001800 bcf796473ebf881b7a181041dd280dfb 518 PRINTS PR00096 Glutamine amidotransferase superfamily signature 173 186 1.0E-6 T 11-10-2018 ABE28_020100 5185cc4feecfa06bdc0d575fb21d6aed 345 Pfam PF04235 Protein of unknown function (DUF418) 188 340 1.2E-30 T 11-10-2018 IPR007349 Domain of unknown function DUF418 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Gene3D G3DSA:1.10.1660.10 1 73 2.6E-22 T 11-10-2018 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 SMART SM00422 6 75 2.5E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Pfam PF13411 MerR HTH family regulatory protein 6 74 1.0E-15 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Gene3D G3DSA:3.40.50.280 176 292 1.6E-17 T 11-10-2018 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Pfam PF02310 B12 binding domain 178 287 2.3E-12 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Gene3D G3DSA:1.10.1240.10 93 169 1.2E-20 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 Pfam PF02607 B12 binding domain 96 163 1.0E-10 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 SUPERFAMILY SSF46955 6 83 4.07E-16 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_014415 51ce18c7a12f75f8e7b295f6c2a6db89 296 SUPERFAMILY SSF52242 177 275 9.73E-14 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_007610 a2a380edf1a3e300fd5d369e91cc3713 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 338 358 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABE28_007610 a2a380edf1a3e300fd5d369e91cc3713 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 17 415 2.1E-132 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABE28_007610 a2a380edf1a3e300fd5d369e91cc3713 429 Pfam PF00860 Permease family 19 392 1.6E-106 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_007170 e8e78242686e5e4fb3bb595819f4ebcc 275 Pfam PF01522 Polysaccharide deacetylase 82 199 2.6E-27 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_007170 e8e78242686e5e4fb3bb595819f4ebcc 275 Gene3D G3DSA:3.20.20.370 25 270 1.7E-51 T 11-10-2018 ABE28_007170 e8e78242686e5e4fb3bb595819f4ebcc 275 SUPERFAMILY SSF88713 75 267 4.94E-43 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 SUPERFAMILY SSF53901 38 360 1.26E-44 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 Gene3D G3DSA:3.40.47.10 2 212 1.4E-59 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 64 206 1.8E-15 T 11-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 PIRSF PIRSF000451 1 361 3.6E-118 T 11-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 224 359 9.4E-20 T 11-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal ABE28_013930 3ef320a26ec450bd7cae9b3abf09cbcb 361 Gene3D G3DSA:3.40.47.10 218 359 1.1E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 3.9E-63 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 Gene3D G3DSA:3.90.1170.10 1 144 8.0E-56 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.114 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.8E-53 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 ABE28_000620 32f60474daf90eb83a75ebca6196fb21 144 SUPERFAMILY SSF54686 1 137 1.31E-59 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_004625 91fa4024c7cfc6c1408baea21bd505b9 245 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 54 230 1.8E-49 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ABE28_004625 91fa4024c7cfc6c1408baea21bd505b9 245 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 59 225 2.1E-58 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ABE28_012925 2adde6dc9d84cdfe2b19c43392c23873 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 211 3.8E-65 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 ABE28_012925 2adde6dc9d84cdfe2b19c43392c23873 214 Pfam PF03006 Haemolysin-III related 8 204 7.9E-43 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ABE28_023950 2adde6dc9d84cdfe2b19c43392c23873 214 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 211 3.8E-65 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 ABE28_023950 2adde6dc9d84cdfe2b19c43392c23873 214 Pfam PF03006 Haemolysin-III related 8 204 7.9E-43 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 ABE28_013605 d0f275c3f3314dedd409771d8551141a 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 263 1.7E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_013605 d0f275c3f3314dedd409771d8551141a 277 Gene3D G3DSA:1.10.3720.10 4 269 3.4E-69 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013605 d0f275c3f3314dedd409771d8551141a 277 SUPERFAMILY SSF161098 12 276 3.74E-76 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 9 308 1.7E-48 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 Gene3D G3DSA:3.40.50.10330 3 131 2.9E-29 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 Pfam PF00609 Diacylglycerol kinase accessory domain 141 288 2.0E-5 T 11-10-2018 IPR000756 Diacylglycerol kinase, accessory domain GO:0004143|GO:0007205 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817|Reactome: R-HSA-114508 ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 SUPERFAMILY SSF111331 8 308 5.89E-66 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 Gene3D G3DSA:2.60.200.40 132 301 3.3E-39 T 11-10-2018 ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 SMART SM00046 7 135 0.0055 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_017445 9200be42ed1a4ade5b1bfe5e48912c28 310 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 131 5.3E-23 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 Pfam PF01728 FtsJ-like methyltransferase 62 243 7.3E-17 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 Gene3D G3DSA:3.10.290.10 2 64 4.7E-23 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 SUPERFAMILY SSF55174 4 71 2.65E-13 T 11-10-2018 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 SUPERFAMILY SSF53335 52 245 2.33E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 6.3E-92 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 Gene3D G3DSA:3.40.50.150 65 275 1.6E-82 T 11-10-2018 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 SMART SM00363 6 71 8.1E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 Pfam PF01479 S4 domain 6 49 3.8E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_014920 201427c77883a29cb2d1ded16c6aa548 275 PIRSF PIRSF005578 1 266 1.5E-102 T 11-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 PRINTS PR00046 Major sigma-70 factor signature 192 200 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 PRINTS PR00046 Major sigma-70 factor signature 316 328 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 PRINTS PR00046 Major sigma-70 factor signature 352 363 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 PRINTS PR00046 Major sigma-70 factor signature 168 181 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 PRINTS PR00046 Major sigma-70 factor signature 337 352 3.2E-32 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 140 376 4.0E-125 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Gene3D G3DSA:1.10.10.10 217 292 8.7E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Gene3D G3DSA:1.10.601.10 139 216 5.1E-51 T 11-10-2018 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Gene3D G3DSA:1.10.601.10 104 138 4.5E-11 T 11-10-2018 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Pfam PF04539 Sigma-70 region 3 223 299 6.6E-33 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Pfam PF04542 Sigma-70 region 2 144 213 3.8E-22 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Gene3D G3DSA:1.10.220.120 15 81 8.1E-6 T 11-10-2018 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Gene3D G3DSA:1.10.10.10 305 377 2.8E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 SUPERFAMILY SSF88659 274 375 3.36E-30 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 140 365 1.9E-39 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Pfam PF04545 Sigma-70, region 4 312 365 5.2E-20 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Pfam PF03979 Sigma-70 factor, region 1.1 18 90 1.5E-12 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 168 181 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Pfam PF00140 Sigma-70 factor, region 1.2 106 139 7.6E-18 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 SUPERFAMILY SSF88659 217 290 2.8E-23 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 SUPERFAMILY SSF88946 105 214 1.96E-54 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 3 377 34.311 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 ABE28_015365 e2762cc399939efb06df0eb42b15a8b5 377 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 337 363 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_002090 5255a4f5ed9a09085195e1ab5816bf59 392 ProDom PD121987 PLASMID RESISTANT TELLURIUM KLAA KLAA/KILA MAINTENANCE RESISTANCE KILA TELLURITE 110 323 0.002 T 11-10-2018 ABE28_002090 5255a4f5ed9a09085195e1ab5816bf59 392 PIRSF PIRSF026508 21 392 1.1E-118 T 11-10-2018 IPR008863 Toxic anion resistance ABE28_002090 5255a4f5ed9a09085195e1ab5816bf59 392 Pfam PF05816 Toxic anion resistance protein (TelA) 61 388 8.6E-124 T 11-10-2018 IPR008863 Toxic anion resistance ABE28_018080 2d86804ea215e83797bceb830fec6169 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 369 3.3E-49 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 PRINTS PR00084 Mannitol dehydrogenase signature 152 165 6.9E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 PRINTS PR00084 Mannitol dehydrogenase signature 116 129 6.9E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 6.9E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 6.9E-13 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 Gene3D G3DSA:3.40.50.720 2 202 9.1E-69 T 11-10-2018 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 SUPERFAMILY SSF48179 202 380 6.12E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 Gene3D G3DSA:1.10.1040.10 204 380 9.5E-63 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 SUPERFAMILY SSF51735 4 190 2.41E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018080 2d86804ea215e83797bceb830fec6169 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 152 164 - T 11-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 3 124 2.1E-24 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_018080 2d86804ea215e83797bceb830fec6169 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 376 37.583 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_012785 ae00b2769808e7e278d5fd86894cbe13 304 Pfam PF00005 ABC transporter 22 162 1.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_012785 ae00b2769808e7e278d5fd86894cbe13 304 SMART SM00382 30 211 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012785 ae00b2769808e7e278d5fd86894cbe13 304 SUPERFAMILY SSF52540 4 229 2.41E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012785 ae00b2769808e7e278d5fd86894cbe13 304 Gene3D G3DSA:3.40.50.300 1 233 1.3E-63 T 11-10-2018 ABE28_012785 ae00b2769808e7e278d5fd86894cbe13 304 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 Gene3D G3DSA:3.40.50.10860 42 177 1.9E-77 T 11-10-2018 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 Gene3D G3DSA:3.40.50.720 190 424 1.0E-82 T 11-10-2018 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 SUPERFAMILY SSF53223 13 192 2.75E-62 T 11-10-2018 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 Gene3D G3DSA:1.10.8.1210 21 41 1.9E-77 T 11-10-2018 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 SMART SM00839 192 421 1.4E-89 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 SUPERFAMILY SSF51735 190 423 2.5E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 101 115 3.1E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 349 360 3.1E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 223 243 3.1E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 181 203 3.1E-31 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 PIRSF PIRSF000185 4 424 1.5E-157 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 44 171 3.1E-52 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_013755 f342dc6cb91e63bc2b0726ef31ee738e 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 190 421 1.0E-70 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 4 365 1.4E-155 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 SUPERFAMILY SSF51338 5 365 1.15E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 Gene3D G3DSA:2.30.40.10 6 363 4.9E-108 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 SUPERFAMILY SSF51556 53 317 1.58E-63 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_010875 36e4be350797d42809ed9d16d827376e 367 PIRSF PIRSF039004 1 367 6.4E-124 T 11-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 Pfam PF01979 Amidohydrolase family 50 334 1.3E-6 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_010875 36e4be350797d42809ed9d16d827376e 367 Gene3D G3DSA:3.20.20.140 53 317 4.9E-108 T 11-10-2018 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 Gene3D G3DSA:3.40.50.300 288 515 3.9E-44 T 11-10-2018 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 ProSitePatterns PS00211 ABC transporters family signature. 440 454 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 Pfam PF12848 ABC transporter 230 315 5.1E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 SUPERFAMILY SSF52540 315 510 3.15E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 Gene3D G3DSA:3.40.50.300 4 285 6.4E-63 T 11-10-2018 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 SMART SM00382 349 514 6.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 SMART SM00382 28 236 1.8E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 SUPERFAMILY SSF52540 4 233 3.87E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 Pfam PF00005 ABC transporter 342 468 7.2E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023325 032338dc541eddfff6c3ab40fd4cac68 516 Pfam PF00005 ABC transporter 20 191 2.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_015210 42a51c743576e919f9666ad7b1f4ded2 190 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 5 181 6.8E-43 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABE28_015210 42a51c743576e919f9666ad7b1f4ded2 190 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 5 181 1.1E-53 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABE28_015210 42a51c743576e919f9666ad7b1f4ded2 190 PIRSF PIRSF006806 1 184 1.9E-51 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase ABE28_015210 42a51c743576e919f9666ad7b1f4ded2 190 SUPERFAMILY SSF100950 4 187 6.28E-51 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_015210 42a51c743576e919f9666ad7b1f4ded2 190 Gene3D G3DSA:3.40.50.10420 1 189 1.9E-64 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_023360 e303996c08e4f1d4c4f64541102cfed8 398 Gene3D G3DSA:3.30.420.40 7 204 1.1E-28 T 11-10-2018 ABE28_023360 e303996c08e4f1d4c4f64541102cfed8 398 SUPERFAMILY SSF53067 209 349 7.95E-17 T 11-10-2018 ABE28_023360 e303996c08e4f1d4c4f64541102cfed8 398 SUPERFAMILY SSF53067 5 197 2.07E-9 T 11-10-2018 ABE28_023360 e303996c08e4f1d4c4f64541102cfed8 398 Pfam PF06406 StbA protein 177 341 9.8E-7 T 11-10-2018 IPR009440 Plasmid segregation protein ParM/StbA ABE28_023360 e303996c08e4f1d4c4f64541102cfed8 398 Gene3D G3DSA:3.30.420.40 205 342 1.1E-28 T 11-10-2018 ABE28_005685 5a45a98ddf3e693c3a4041616b4a7aaf 511 SUPERFAMILY SSF51395 8 498 5.76E-107 T 11-10-2018 ABE28_005685 5a45a98ddf3e693c3a4041616b4a7aaf 511 Pfam PF01645 Conserved region in glutamate synthase 126 478 1.7E-105 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABE28_005685 5a45a98ddf3e693c3a4041616b4a7aaf 511 Gene3D G3DSA:3.20.20.70 101 509 1.3E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_005685 5a45a98ddf3e693c3a4041616b4a7aaf 511 PIRSF PIRSF500060 1 511 6.3E-207 T 11-10-2018 IPR027283 Glutamate synthase large subunit-like protein, bacteria ABE28_005685 5a45a98ddf3e693c3a4041616b4a7aaf 511 PIRSF PIRSF006429 1 507 4.6E-158 T 11-10-2018 IPR024188 Glutamate synthase large subunit-like protein ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 SUPERFAMILY SSF53067 252 492 6.15E-57 T 11-10-2018 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 248 5.1E-76 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 SUPERFAMILY SSF53067 5 250 1.62E-79 T 11-10-2018 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 Gene3D G3DSA:3.30.420.40 250 493 4.5E-77 T 11-10-2018 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 TIGRFAM TIGR01312 XylB: xylulokinase 7 485 6.4E-161 T 11-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 444 1.6E-33 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 PIRSF PIRSF000538 3 493 7.9E-152 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_011115 0d07980637b0adbbc0ebf59b35986df3 493 Gene3D G3DSA:3.30.420.40 2 248 4.5E-92 T 11-10-2018 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 45.742 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 Pfam PF00221 Aromatic amino acid lyase 9 467 3.2E-199 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 492 2.1E-220 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 SUPERFAMILY SSF48557 1 495 2.2E-198 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 Gene3D G3DSA:1.10.275.10 1 195 4.8E-70 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_001705 6b63728f28fc5e9ccf1953726db820f9 505 Gene3D G3DSA:1.20.200.10 196 498 4.2E-125 T 11-10-2018 ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 SUPERFAMILY SSF46689 3 79 1.77E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 Pfam PF01380 SIS domain 129 257 2.6E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 Gene3D G3DSA:3.40.50.10490 97 281 2.7E-40 T 11-10-2018 ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 Gene3D G3DSA:1.10.10.10 1 78 4.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 78 5.8E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ABE28_013780 9eed21f819bd9207a59150d8a4d5a827 283 SUPERFAMILY SSF53697 99 276 3.2E-35 T 11-10-2018 ABE28_009095 efc773f5af8b1a72ef56a67d4769ffd0 64 SMART SM00530 4 59 1.2E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009095 efc773f5af8b1a72ef56a67d4769ffd0 64 Pfam PF01381 Helix-turn-helix 10 59 4.5E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009095 efc773f5af8b1a72ef56a67d4769ffd0 64 Gene3D G3DSA:1.10.260.40 2 63 1.7E-15 T 11-10-2018 ABE28_009095 efc773f5af8b1a72ef56a67d4769ffd0 64 SUPERFAMILY SSF47413 3 63 3.1E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_020065 22e56a82e1652e985e76567522b303b6 288 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 180 208 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_020065 22e56a82e1652e985e76567522b303b6 288 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 54 285 7.0E-69 T 11-10-2018 ABE28_020065 22e56a82e1652e985e76567522b303b6 288 Gene3D G3DSA:3.40.50.720 2 285 8.5E-91 T 11-10-2018 ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 248 268 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 231 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 132 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 212 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 46 63 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 183 9.9E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 SUPERFAMILY SSF51735 43 286 3.38E-88 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 193 212 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 173 181 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_020065 22e56a82e1652e985e76567522b303b6 288 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 121 132 1.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008305 f526d061e0b870359997a4492163604d 85 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 9.3E-35 T 11-10-2018 IPR021637 Protein of unknown function DUF3243 ABE28_008305 f526d061e0b870359997a4492163604d 85 Gene3D G3DSA:1.10.760.20 1 82 1.6E-32 T 11-10-2018 IPR038292 YmfJ/YflH superfamily ABE28_008305 f526d061e0b870359997a4492163604d 85 PIRSF PIRSF004764 1 85 1.3E-27 T 11-10-2018 IPR024702 Uncharacterised conserved protein YmfJ ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 Gene3D G3DSA:3.40.1190.20 51 363 1.4E-67 T 11-10-2018 IPR029056 Ribokinase-like ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 Pfam PF00294 pfkB family carbohydrate kinase 57 348 5.7E-46 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 43 1.3E-9 T 11-10-2018 ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 Gene3D G3DSA:1.10.10.10 2 49 7.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 SUPERFAMILY SSF46785 3 46 1.02E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004255 a70e2bc34041458152af2fd360db85e7 368 SUPERFAMILY SSF53613 57 347 5.14E-48 T 11-10-2018 IPR029056 Ribokinase-like ABE28_016120 ee8adfd0fb5fc7a44d59047163862073 253 Gene3D G3DSA:3.40.50.720 1 253 4.1E-82 T 11-10-2018 ABE28_016120 ee8adfd0fb5fc7a44d59047163862073 253 SUPERFAMILY SSF69572 4 244 4.71E-64 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABE28_016120 ee8adfd0fb5fc7a44d59047163862073 253 Pfam PF00899 ThiF family 6 158 1.1E-37 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 61 5.7E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 Pfam PF03466 LysR substrate binding domain 88 283 9.8E-34 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 SUPERFAMILY SSF46785 1 110 6.17E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 Gene3D G3DSA:1.10.10.10 1 91 5.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 Gene3D G3DSA:3.40.190.10 92 282 9.5E-43 T 11-10-2018 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 Gene3D G3DSA:3.40.190.10 160 260 9.5E-43 T 11-10-2018 ABE28_019625 236c8e307616ea1b935f14b67d8c4c61 289 SUPERFAMILY SSF53850 90 284 2.29E-32 T 11-10-2018 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 4.8E-31 T 11-10-2018 IPR032305 GTP-binding protein, middle domain ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Gene3D G3DSA:3.40.50.300 199 361 3.9E-33 T 11-10-2018 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Hamap MF_00900 GTPase HflX [hflX]. 27 385 46.461 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 8 355 8.7E-146 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 SUPERFAMILY SSF52540 197 368 2.29E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 PIRSF PIRSF006809 2 413 5.5E-149 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Pfam PF01926 50S ribosome-binding GTPase 199 308 1.9E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Gene3D G3DSA:3.40.50.11060 16 138 2.4E-42 T 11-10-2018 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 Pfam PF13167 GTP-binding GTPase N-terminal 24 112 5.2E-33 T 11-10-2018 IPR025121 GTPase HflX, N-terminal ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_008740 d1e4e3c25d8333b91f014dd7c9b7285d 417 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 1.3E-9 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_022485 dab119a5ff90ef929b4ca72c08308946 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 2 279 1.8E-98 T 11-10-2018 IPR003797 DegV ABE28_022485 dab119a5ff90ef929b4ca72c08308946 280 Gene3D G3DSA:3.40.50.10170 1 151 3.2E-56 T 11-10-2018 ABE28_022485 dab119a5ff90ef929b4ca72c08308946 280 SUPERFAMILY SSF82549 1 279 2.35E-95 T 11-10-2018 ABE28_022485 dab119a5ff90ef929b4ca72c08308946 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 6.3E-107 T 11-10-2018 IPR003797 DegV ABE28_022485 dab119a5ff90ef929b4ca72c08308946 280 Gene3D G3DSA:3.30.1180.10 153 279 8.9E-44 T 11-10-2018 ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 Gene3D G3DSA:3.40.1080.10 1 218 5.0E-80 T 11-10-2018 ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 4.2E-91 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 SUPERFAMILY SSF100950 2 221 1.1E-74 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 SMART SM00882 6 219 8.4E-73 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ABE28_008520 fc6f01eee710465ea30f66032bf68b0e 231 Pfam PF01144 Coenzyme A transferase 6 218 1.7E-62 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 SUPERFAMILY SSF53720 5 484 1.24E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 485 6.6E-188 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 4 485 71.53 T 11-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 Pfam PF00171 Aldehyde dehydrogenase family 18 479 4.6E-149 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 Gene3D G3DSA:3.40.309.10 255 454 7.3E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_012280 6497ee9d540eaaf80523b8785b0ade3a 485 Gene3D G3DSA:3.40.605.10 26 462 7.3E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_010485 e85d4ab2e8c6903246e6cdd3b1c0b2f3 197 SUPERFAMILY SSF159888 9 119 2.49E-21 T 11-10-2018 ABE28_010485 e85d4ab2e8c6903246e6cdd3b1c0b2f3 197 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 134 191 3.7E-15 T 11-10-2018 ABE28_010485 e85d4ab2e8c6903246e6cdd3b1c0b2f3 197 PIRSF PIRSF021308 1 197 1.3E-98 T 11-10-2018 IPR016786 Uncharacterised protein YdeI, bacterial ABE28_010485 e85d4ab2e8c6903246e6cdd3b1c0b2f3 197 Pfam PF08818 Domain of unknown function (DU1801) 21 117 5.5E-14 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ABE28_019540 8f4f66784841203fe8d4b5fb14166262 368 Pfam PF07853 Protein of unknown function (DUF1648) 146 193 1.7E-13 T 11-10-2018 IPR012867 Domain of unknown function DUF1648 ABE28_019540 8f4f66784841203fe8d4b5fb14166262 368 PIRSF PIRSF032908 1 368 5.5E-68 T 11-10-2018 IPR014574 Uncharacterised conserved protein UCP032908 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 PIRSF PIRSF000445 1 432 2.4E-152 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 SUPERFAMILY SSF69742 1 158 5.62E-47 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 1.4E-44 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.571 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 419 7.8E-20 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Gene3D G3DSA:3.40.50.720 161 313 3.6E-44 T 11-10-2018 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 SUPERFAMILY SSF69075 317 420 2.62E-17 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Gene3D G3DSA:3.30.460.30 1 158 3.0E-55 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.3E-46 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 SUPERFAMILY SSF51735 161 315 3.66E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016470 057f02ea8ee60d408573b43190f8ec33 449 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 4.9E-154 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF52540 377 490 3.19E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:3.30.2060.10 140 225 5.3E-63 T 11-10-2018 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF52540 543 803 8.5E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SMART SM01058 499 596 1.7E-50 T 11-10-2018 IPR003711 CarD-like/TRCF domain ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SMART SM00982 1024 1124 1.8E-36 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF52540 15 368 2.61E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Pfam PF02559 CarD-like/TRCF domain 500 595 4.2E-32 T 11-10-2018 IPR003711 CarD-like/TRCF domain ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 158 1098 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:2.30.30.840 503 561 1.9E-244 T 11-10-2018 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:3.40.50.11180 35 325 5.3E-63 T 11-10-2018 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SMART SM00490 843 930 3.9E-18 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:3.40.50.300 562 801 1.9E-244 T 11-10-2018 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF143517 1010 1168 1.96E-37 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Pfam PF03461 TRCF domain 1026 1117 1.1E-26 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SMART SM00487 620 810 1.2E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:3.90.1150.50 1020 1178 8.0E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1114 28.506 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF141259 490 568 3.01E-27 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Gene3D G3DSA:3.40.50.300 498 1008 1.9E-244 T 11-10-2018 ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 SUPERFAMILY SSF52540 802 1008 8.42E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Pfam PF00271 Helicase conserved C-terminal domain 828 929 2.9E-15 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_000275 8d3837523360a520af9e5bcaf8ec9026 1178 Pfam PF00270 DEAD/DEAH box helicase 627 784 1.2E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_001765 e9ff4f42915c922740f0585719ef6e9d 158 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 9 148 5.2E-17 T 11-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC ABE28_001765 e9ff4f42915c922740f0585719ef6e9d 158 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 12 118 4.0E-12 T 11-10-2018 IPR020212 ESX secretion system protein YueC ABE28_001765 e9ff4f42915c922740f0585719ef6e9d 158 Pfam PF17355 Family of unknown function (DUF5383) 29 149 9.9E-32 T 11-10-2018 IPR020212 ESX secretion system protein YueC ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 SMART SM00862 153 229 2.0E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 229 2.0E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 Pfam PF00072 Response regulator receiver domain 6 115 2.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 SMART SM00448 4 114 3.9E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 Gene3D G3DSA:1.10.10.10 132 231 4.5E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 Gene3D G3DSA:3.40.50.2300 1 131 2.7E-38 T 11-10-2018 ABE28_008605 f079a7fbe45b460a283c50be8a8d1717 231 SUPERFAMILY SSF52172 1 182 2.57E-41 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Gene3D G3DSA:3.30.565.10 314 468 1.0E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SMART SM00304 189 241 5.5E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Pfam PF00672 HAMP domain 191 237 1.4E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SUPERFAMILY SSF55874 299 465 8.51E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 391 405 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 2.2E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 308 7.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 354 463 7.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SUPERFAMILY SSF47384 225 309 6.08E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Gene3D G3DSA:1.10.287.130 239 309 2.2E-20 T 11-10-2018 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SMART SM00388 242 309 2.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SUPERFAMILY SSF158472 191 236 6.54E-11 T 11-10-2018 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 Gene3D G3DSA:1.10.8.500 189 238 4.3E-11 T 11-10-2018 ABE28_013100 10459d4c2d577eefa7ea9a3fdfa8981b 471 SMART SM00387 354 466 6.7E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003985 c22d894b15f507eb95251aa59807f57c 106 Pfam PF03992 Antibiotic biosynthesis monooxygenase 3 77 4.2E-12 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_003985 c22d894b15f507eb95251aa59807f57c 106 SUPERFAMILY SSF54909 2 99 3.81E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_003985 c22d894b15f507eb95251aa59807f57c 106 Gene3D G3DSA:3.30.70.100 1 106 9.3E-41 T 11-10-2018 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 Gene3D G3DSA:3.40.309.10 261 450 7.9E-189 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 SUPERFAMILY SSF53720 8 483 5.63E-174 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 284 295 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 Gene3D G3DSA:3.40.605.10 16 478 7.9E-189 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 256 263 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_009695 be02f915ab1c2eeb46319982c3584464 503 Pfam PF00171 Aldehyde dehydrogenase family 20 480 9.2E-181 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_013920 35739f5df103786e304c484ca443e483 1235 Pfam PF00350 Dynamin family 48 201 8.1E-26 T 11-10-2018 IPR022812 Dynamin superfamily ABE28_013920 35739f5df103786e304c484ca443e483 1235 Pfam PF00350 Dynamin family 649 875 3.9E-40 T 11-10-2018 IPR022812 Dynamin superfamily ABE28_013920 35739f5df103786e304c484ca443e483 1235 SUPERFAMILY SSF52540 31 258 2.43E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013920 35739f5df103786e304c484ca443e483 1235 SUPERFAMILY SSF52540 626 912 5.28E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013920 35739f5df103786e304c484ca443e483 1235 Gene3D G3DSA:3.40.50.300 48 279 6.4E-36 T 11-10-2018 ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Gene3D G3DSA:3.90.1720.10 147 275 5.9E-39 T 11-10-2018 ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 SUPERFAMILY SSF54106 25 69 1.31E-10 T 11-10-2018 ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Pfam PF00877 NlpC/P60 family 165 272 1.7E-28 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Gene3D G3DSA:3.10.350.10 77 146 2.5E-15 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 SUPERFAMILY SSF54001 147 274 1.99E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 SMART SM00257 87 132 8.7E-15 T 11-10-2018 IPR018392 LysM domain ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 SMART SM00257 26 69 1.5E-13 T 11-10-2018 IPR018392 LysM domain ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Pfam PF01476 LysM domain 27 68 8.1E-13 T 11-10-2018 IPR018392 LysM domain ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Pfam PF01476 LysM domain 88 131 2.4E-12 T 11-10-2018 IPR018392 LysM domain ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 SUPERFAMILY SSF54106 87 131 1.44E-9 T 11-10-2018 ABE28_004485 c7e3eb4dbdae5391875162a9b04f7ca0 275 Gene3D G3DSA:3.10.350.10 22 74 1.9E-16 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_001200 650617aabe2c8653a3c76118bac76733 577 Gene3D G3DSA:1.10.8.60 321 399 1.3E-20 T 11-10-2018 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 318 7.5E-41 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 Gene3D G3DSA:1.20.58.760 403 576 1.9E-38 T 11-10-2018 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 SUPERFAMILY SSF52540 147 395 4.23E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001200 650617aabe2c8653a3c76118bac76733 577 Pfam PF01434 Peptidase family M41 382 516 2.3E-29 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 SUPERFAMILY SSF140990 405 566 2.62E-35 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 Gene3D G3DSA:3.40.50.300 144 320 7.7E-59 T 11-10-2018 ABE28_001200 650617aabe2c8653a3c76118bac76733 577 SMART SM00382 185 321 2.5E-23 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 Pfam PF02803 Thiolase, C-terminal domain 260 381 2.0E-43 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 SUPERFAMILY SSF53901 260 381 5.76E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 380 4.0E-135 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 Pfam PF00108 Thiolase, N-terminal domain 4 252 3.9E-77 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 PIRSF PIRSF000429 1 383 8.7E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 Gene3D G3DSA:3.40.47.10 6 265 1.3E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 SUPERFAMILY SSF53901 3 259 3.01E-78 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 Gene3D G3DSA:3.40.47.10 127 379 1.3E-147 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_003575 2fb8f86509acd95c42e74310d5709342 383 ProSitePatterns PS00737 Thiolases signature 2. 328 344 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_014745 832249b6cf0401e1468de583fd275724 184 SUPERFAMILY SSF46955 1 99 5.95E-9 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_014745 832249b6cf0401e1468de583fd275724 184 Pfam PF13411 MerR HTH family regulatory protein 1 63 2.6E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_014745 832249b6cf0401e1468de583fd275724 184 Gene3D G3DSA:1.10.1660.10 1 66 4.4E-21 T 11-10-2018 ABE28_014745 832249b6cf0401e1468de583fd275724 184 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 169 20.086 T 11-10-2018 IPR023522 Chromosome-anchoring protein RacA ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 Pfam PF00488 MutS domain V 331 511 1.5E-32 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 783 22.1 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 783 5.7E-273 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SUPERFAMILY SSF48334 17 287 4.05E-30 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SMART SM00463 706 784 2.3E-19 T 11-10-2018 IPR002625 Smr domain ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SMART SM00533 9 315 3.1E-29 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SUPERFAMILY SSF160443 707 782 7.59E-9 T 11-10-2018 IPR036063 Smr domain superfamily ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SMART SM00534 328 513 6.0E-74 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 PIRSF PIRSF005814 1 784 4.0E-275 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 SUPERFAMILY SSF52540 293 515 4.15E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 Gene3D G3DSA:3.40.50.300 293 639 8.8E-80 T 11-10-2018 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 Pfam PF01713 Smr domain 709 784 4.0E-19 T 11-10-2018 IPR002625 Smr domain ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 Gene3D G3DSA:3.30.1370.110 697 784 3.1E-23 T 11-10-2018 ABE28_016725 05779612d8268bfafd0fdd9c39098d5a 784 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 Gene3D G3DSA:3.40.50.300 1 241 7.2E-73 T 11-10-2018 ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 Pfam PF00005 ABC transporter 17 156 5.4E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 207 239 6.7E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 SMART SM00382 26 205 6.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_004230 fa34d25bcd898b69e042b5171b14841b 242 SUPERFAMILY SSF52540 2 231 1.95E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 4.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 4.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 Gene3D G3DSA:1.10.357.10 51 189 1.0E-16 T 11-10-2018 ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 SUPERFAMILY SSF48498 75 192 2.67E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 50 4.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 Gene3D G3DSA:1.10.10.60 2 50 9.4E-16 T 11-10-2018 ABE28_002390 7aa5dcb6acb813dfabd1a397f3adcc7a 193 SUPERFAMILY SSF46689 4 62 1.18E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 650 668 7.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 605 623 7.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 712 726 7.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 679 697 7.5E-40 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 861 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 635 653 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Gene3D G3DSA:1.10.8.60 772 861 2.3E-26 T 11-10-2018 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Pfam PF07724 AAA domain (Cdc48 subfamily) 600 766 3.0E-55 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SMART SM01086 772 861 1.4E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Gene3D G3DSA:1.10.1780.10 1 149 6.4E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SUPERFAMILY SSF52540 550 843 2.15E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SUPERFAMILY SSF81923 4 157 3.92E-36 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Gene3D G3DSA:3.40.50.300 554 770 2.0E-85 T 11-10-2018 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SUPERFAMILY SSF52540 158 549 2.41E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 772 843 1.4E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 18 68 0.0021 T 11-10-2018 IPR004176 Clp, N-terminal ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 146 1.3E-8 T 11-10-2018 IPR004176 Clp, N-terminal ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SMART SM00382 199 345 2.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 SMART SM00382 601 754 2.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Gene3D G3DSA:3.40.50.300 344 548 3.8E-71 T 11-10-2018 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Gene3D G3DSA:3.40.50.300 150 343 4.2E-74 T 11-10-2018 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 336 2.4E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_006065 f7bfd5c948ad93cce3b10fc7563992e0 862 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 SUPERFAMILY SSF52374 174 385 3.66E-86 T 11-10-2018 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 Pfam PF01747 ATP-sulfurylase 174 384 1.3E-94 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 31 388 50.636 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 Pfam PF14306 PUA-like domain 8 166 4.7E-53 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 Gene3D G3DSA:3.40.50.620 174 386 2.2E-97 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 10 383 2.2E-138 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 SUPERFAMILY SSF88697 8 167 6.36E-51 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_012530 f2bcfe99f4352c71e930e4ff0c1eb814 394 Gene3D G3DSA:3.10.400.10 8 165 6.3E-48 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.70.1440 677 872 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82866 813 1037 6.02E-46 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.70.1430 583 676 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:1.20.1640.10 11 528 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.2090.10 727 815 1.7E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82866 316 514 7.98E-42 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 382 403 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 355 378 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 568 585 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 410 434 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 PRINTS PR00702 Acriflavin resistance protein family signature 491 514 3.8E-49 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82693 134 348 7.32E-14 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82714 729 813 7.59E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:1.20.1640.10 529 1029 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82714 185 248 1.83E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.70.1320 131 351 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.70.1430 41 823 1.7E-270 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 SUPERFAMILY SSF82693 41 131 1.46E-20 T 11-10-2018 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Pfam PF00873 AcrB/AcrD/AcrF family 4 245 2.1E-47 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Pfam PF00873 AcrB/AcrD/AcrF family 277 1032 8.5E-168 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_001305 eb8893272ceba064061b1e3198a6766d 1044 Gene3D G3DSA:3.30.2090.10 177 295 1.7E-270 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 285 35.45 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 Gene3D G3DSA:1.10.287.80 6 281 1.9E-102 T 11-10-2018 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 SUPERFAMILY SSF52943 2 285 1.1E-92 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 285 1.0E-109 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 PRINTS PR00126 ATP synthase gamma subunit signature 232 251 2.8E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 2.8E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 PRINTS PR00126 ATP synthase gamma subunit signature 263 284 2.8E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 2.8E-39 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 271 284 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 Pfam PF00231 ATP synthase 3 285 2.4E-98 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022835 8731b9fd092fd5eea219b205f1ecd953 286 Gene3D G3DSA:3.40.1380.10 61 204 1.9E-102 T 11-10-2018 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 SUPERFAMILY SSF47413 1 61 6.57E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 SUPERFAMILY SSF53822 62 338 1.52E-73 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 SMART SM00354 3 73 1.7E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 49 3.4E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 322 1.1E-34 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 Gene3D G3DSA:3.40.50.2300 163 331 1.6E-73 T 11-10-2018 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 Gene3D G3DSA:3.40.50.2300 64 326 1.6E-73 T 11-10-2018 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 1.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 1.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_019255 7b634ffcb7fecc1fe7f74f1869f7c5a8 341 Gene3D G3DSA:1.10.260.40 1 60 6.5E-22 T 11-10-2018 ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 Gene3D G3DSA:3.40.50.720 24 306 2.9E-97 T 11-10-2018 ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 278 2.1E-61 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 Gene3D G3DSA:3.40.50.720 98 285 2.9E-97 T 11-10-2018 ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 SUPERFAMILY SSF52283 18 121 9.48E-13 T 11-10-2018 ABE28_012290 83fbf078ed440b43416cdfd106bc000c 318 SUPERFAMILY SSF51735 99 279 1.48E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 SUPERFAMILY SSF51905 2 301 1.82E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 6 304 2.5E-120 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 134 154 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 293 2.2E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.8E-37 T 11-10-2018 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.8E-37 T 11-10-2018 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.8E-37 T 11-10-2018 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 146 164 1.8E-37 T 11-10-2018 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.8E-37 T 11-10-2018 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 127 139 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 60 70 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 142 166 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 105 113 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 40 55 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 194 210 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 7 29 3.5E-71 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 Gene3D G3DSA:3.50.50.60 7 300 5.9E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_022200 0b62a037e63480699635ec3ef4e8c899 315 Gene3D G3DSA:3.50.50.60 116 239 5.9E-114 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Gene3D G3DSA:3.30.230.10 213 325 4.4E-32 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Pfam PF08676 MutL C terminal dimerisation domain 465 606 4.2E-45 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 1.2E-36 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 SMART SM01340 208 326 1.0E-52 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Gene3D G3DSA:3.30.1370.100 506 599 2.9E-63 T 11-10-2018 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 84 4.3E-10 T 11-10-2018 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 SUPERFAMILY SSF118116 460 648 1.57E-53 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 SUPERFAMILY SSF55874 4 213 1.83E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 SMART SM00853 464 606 1.5E-48 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Gene3D G3DSA:2.30.42.20 465 648 2.9E-63 T 11-10-2018 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Gene3D G3DSA:3.30.565.10 1 212 4.2E-60 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 646 27.476 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 SUPERFAMILY SSF54211 190 326 1.25E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_008390 7f62011fc2b15ba5bef563c8ecc27e29 650 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 2.3E-96 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_006305 55e822c699cce052790a366bcbb23c71 185 SUPERFAMILY SSF101307 11 164 3.92E-48 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 ABE28_006305 55e822c699cce052790a366bcbb23c71 185 Pfam PF04608 Phosphatidylglycerophosphatase A 24 160 4.3E-19 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ABE28_006305 55e822c699cce052790a366bcbb23c71 185 PIRSF PIRSF019587 6 169 1.5E-65 T 11-10-2018 IPR026038 Putative phosphatidylglycerophosphatase ABE28_006305 55e822c699cce052790a366bcbb23c71 185 Gene3D G3DSA:1.10.3760.10 3 176 4.1E-67 T 11-10-2018 ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 6 273 3.3E-120 T 11-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 SUPERFAMILY SSF52540 5 229 9.52E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 Gene3D G3DSA:3.40.50.300 2 277 2.1E-80 T 11-10-2018 ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 Pfam PF00005 ABC transporter 23 169 1.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_000725 a3f78cc86accad4a981c2f39c0b07e23 279 SMART SM00382 32 217 2.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 Pfam PF13365 Trypsin-like peptidase domain 128 272 5.8E-31 T 11-10-2018 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 SUPERFAMILY SSF50156 262 407 7.49E-18 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 Gene3D G3DSA:2.40.10.10 72 189 4.6E-27 T 11-10-2018 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 Gene3D G3DSA:2.40.10.10 193 309 3.2E-41 T 11-10-2018 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 SUPERFAMILY SSF50494 87 306 2.31E-56 T 11-10-2018 IPR009003 Peptidase S1, PA clan ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 Gene3D G3DSA:2.30.42.10 310 408 7.6E-24 T 11-10-2018 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 SMART SM00228 310 396 1.9E-12 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 Pfam PF13180 PDZ domain 310 405 1.1E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 265 282 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 202 226 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 140 152 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 243 260 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 353 365 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_002305 27474b6090088ba2327a6a29dd4fba0a 408 PRINTS PR00834 HtrA/DegQ protease family signature 161 181 7.3E-39 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_020550 f67144ad7b2a22f5bd09e4f504a586ad 211 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 99 202 1.3E-9 T 11-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger ABE28_020550 f67144ad7b2a22f5bd09e4f504a586ad 211 Pfam PF07299 Elongation factor G-binding protein, N-terminal 4 86 3.4E-26 T 11-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal ABE28_020550 f67144ad7b2a22f5bd09e4f504a586ad 211 Gene3D G3DSA:1.20.1280.250 1 84 6.1E-11 T 11-10-2018 IPR038344 EF-G binding protein, N-terminal domain superfamily ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 1.6E-114 T 11-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 SMART SM00382 30 225 2.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 SUPERFAMILY SSF52540 6 233 2.26E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 Gene3D G3DSA:3.40.50.300 3 253 1.8E-56 T 11-10-2018 ABE28_021745 8ff040e99bf7b9d1e8a1099a275736d0 261 Pfam PF00005 ABC transporter 21 173 7.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_013495 397a96a8f136cf321ec32fbb32c53ec3 473 SUPERFAMILY SSF52794 382 470 1.1E-17 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_013495 397a96a8f136cf321ec32fbb32c53ec3 473 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 384 467 3.7E-8 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_013495 397a96a8f136cf321ec32fbb32c53ec3 473 Gene3D G3DSA:3.40.50.2300 371 473 1.8E-29 T 11-10-2018 ABE28_013495 397a96a8f136cf321ec32fbb32c53ec3 473 Pfam PF02378 Phosphotransferase system, EIIC 24 282 1.6E-18 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_013495 397a96a8f136cf321ec32fbb32c53ec3 473 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 14 351 1.0E-145 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 Gene3D G3DSA:3.50.50.60 6 319 1.2E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 Pfam PF01494 FAD binding domain 4 340 2.6E-41 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 Gene3D G3DSA:3.30.9.50 75 271 1.2E-56 T 11-10-2018 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 297 313 2.4E-20 T 11-10-2018 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 2.4E-20 T 11-10-2018 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 2.4E-20 T 11-10-2018 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 282 297 2.4E-20 T 11-10-2018 ABE28_021515 c6c3b1adece4ada2d060cbcf7f38f1a4 364 SUPERFAMILY SSF51905 4 347 8.65E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 Gene3D G3DSA:3.30.230.10 210 338 1.2E-14 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 Pfam PF13180 PDZ domain 128 194 1.3E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 Gene3D G3DSA:2.30.42.10 129 206 7.2E-23 T 11-10-2018 ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 SUPERFAMILY SSF50156 129 211 1.45E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 331 2.7E-8 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 SUPERFAMILY SSF54211 228 333 6.45E-19 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_007415 ab63523064e4ced5f50e6876ee990b87 341 SMART SM00228 108 186 1.5E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_017570 6eb94274395b1ba361ea80541249911c 167 Gene3D G3DSA:1.20.120.450 6 165 3.1E-35 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017570 6eb94274395b1ba361ea80541249911c 167 SUPERFAMILY SSF109854 9 163 3.66E-24 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017570 6eb94274395b1ba361ea80541249911c 167 Pfam PF12867 DinB superfamily 11 159 5.5E-18 T 11-10-2018 IPR024775 DinB-like domain ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 PIRSF PIRSF006294 1 527 1.7E-243 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 Gene3D G3DSA:2.170.8.10 38 330 1.7E-224 T 11-10-2018 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 55.823 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 Gene3D G3DSA:3.90.228.20 214 513 1.7E-224 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 Gene3D G3DSA:3.40.449.10 28 213 1.7E-224 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 SUPERFAMILY SSF53795 213 523 5.72E-136 T 11-10-2018 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 SUPERFAMILY SSF68923 13 212 1.92E-80 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 481 6.1E-227 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABE28_020660 2aecd5f4934070c96adf90809b3133db 528 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 526 9.5E-251 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 ABE28_005855 4db33d27db85c1ab4656bdec1e405e7f 204 Pfam PF09335 SNARE associated Golgi protein 43 161 3.7E-20 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_008265 874d8c801f4174775198dc52b1761225 241 SMART SM00345 14 73 1.2E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008265 874d8c801f4174775198dc52b1761225 241 Gene3D G3DSA:1.10.10.10 2 77 1.7E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008265 874d8c801f4174775198dc52b1761225 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.7E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008265 874d8c801f4174775198dc52b1761225 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.7E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008265 874d8c801f4174775198dc52b1761225 241 SMART SM00866 95 233 5.4E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_008265 874d8c801f4174775198dc52b1761225 241 SUPERFAMILY SSF64288 62 239 1.24E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008265 874d8c801f4174775198dc52b1761225 241 Gene3D G3DSA:3.40.1410.10 78 239 2.1E-31 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008265 874d8c801f4174775198dc52b1761225 241 SUPERFAMILY SSF46785 6 77 5.47E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008265 874d8c801f4174775198dc52b1761225 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 5.4E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008265 874d8c801f4174775198dc52b1761225 241 Pfam PF07702 UTRA domain 96 232 1.5E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_022920 cb872ee5da89be9ab03d1751b747d4f6 294 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 165 3.1E-47 T 11-10-2018 IPR014202 Sporulation stage II, protein R ABE28_022920 cb872ee5da89be9ab03d1751b747d4f6 294 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 170 8.2E-62 T 11-10-2018 IPR014202 Sporulation stage II, protein R ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 Gene3D G3DSA:3.30.70.260 195 285 5.2E-24 T 11-10-2018 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 SUPERFAMILY SSF55021 181 281 1.69E-22 T 11-10-2018 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 230 237 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 Pfam PF00800 Prephenate dehydratase 6 186 7.4E-53 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 PIRSF PIRSF001500 2 285 1.4E-67 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 SUPERFAMILY SSF53850 5 190 4.67E-51 T 11-10-2018 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 Gene3D G3DSA:3.40.190.10 86 175 6.7E-49 T 11-10-2018 ABE28_016310 63376055e79e13bf572f9b9654d928e0 292 Gene3D G3DSA:3.40.190.10 8 184 6.7E-49 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SUPERFAMILY SSF81886 571 825 1.57E-76 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:1.10.1200.230 621 704 0.0 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 ProSitePatterns PS01312 SecA family signature. 480 495 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:3.10.450.50 773 836 4.9E-8 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 1.7E-237 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SUPERFAMILY SSF81767 225 348 1.2E-47 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SUPERFAMILY SSF52540 397 569 6.82E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 61 85 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 115 125 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 99 113 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 393 406 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 168 188 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 319 341 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 PRINTS PR00906 SecA protein signature 356 373 1.6E-68 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Pfam PF01043 SecA preprotein cross-linking domain 230 338 1.2E-41 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SMART SM00957 5 382 7.5E-279 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SUPERFAMILY SSF52540 5 395 3.87E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 780 19.469 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Gene3D G3DSA:1.10.3060.10 571 772 0.0 T 11-10-2018 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Pfam PF02810 SEC-C motif 817 834 7.9E-9 T 11-10-2018 IPR004027 SEC-C motif ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Pfam PF07517 SecA DEAD-like domain 6 382 7.9E-126 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 SMART SM00958 226 338 2.2E-68 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABE28_022385 87f1e7fb95f9a046e1ef9d12d8c11cfd 837 Pfam PF07516 SecA Wing and Scaffold domain 568 777 1.4E-63 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.4E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 Gene3D G3DSA:1.10.10.10 1 82 1.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 Gene3D G3DSA:3.40.190.290 83 287 8.1E-66 T 11-10-2018 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 SUPERFAMILY SSF53850 90 291 4.46E-27 T 11-10-2018 ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 Pfam PF03466 LysR substrate binding domain 90 288 1.7E-31 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_007100 c138a91432baa661236c1ff9d72b4dce 294 SUPERFAMILY SSF46785 3 111 8.46E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 177 2.4E-51 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 PIRSF PIRSF000124 1 410 1.1E-76 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 SUPERFAMILY SSF48179 198 290 6.29E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 SUPERFAMILY SSF51735 1 192 7.2E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 PIRSF PIRSF500136 1 419 4.9E-147 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 Gene3D G3DSA:3.40.50.720 197 422 4.5E-64 T 11-10-2018 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 308 402 3.1E-25 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 284 2.0E-24 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 399 1.3E-127 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 SMART SM00984 308 403 2.4E-31 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 Gene3D G3DSA:3.40.50.720 1 196 4.0E-66 T 11-10-2018 ABE28_020665 48d430308e5eaa4c674b2d3f67232e7c 433 SUPERFAMILY SSF52413 301 403 1.7E-26 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 Gene3D G3DSA:3.90.1150.10 286 430 1.2E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 PIRSF PIRSF001434 1 421 1.2E-120 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 Gene3D G3DSA:3.40.640.10 1 282 3.4E-98 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 SUPERFAMILY SSF53383 2 418 6.25E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 2 418 1.8E-189 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 ABE28_021780 486da9f7c19f2d40815c8fe5165b0a81 431 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 418 5.8E-134 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 274 9.1E-95 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 Gene3D G3DSA:1.20.140.10 278 489 1.3E-85 T 11-10-2018 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 282 480 2.8E-72 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 PIRSF PIRSF000331 1 490 2.0E-169 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 Gene3D G3DSA:1.10.3140.10 3 146 3.0E-49 T 11-10-2018 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 SUPERFAMILY SSF47203 266 482 5.02E-65 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 SUPERFAMILY SSF56645 4 276 5.95E-78 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 3 482 5.5E-210 T 11-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 ABE28_014085 0239f2852779758cb7b4c0c7a2dbb7b4 490 Gene3D G3DSA:2.40.110.10 147 277 1.5E-43 T 11-10-2018 ABE28_010505 7e98278178503bdf101016549ba887b9 203 Gene3D G3DSA:3.40.50.880 1 203 1.2E-42 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_010505 7e98278178503bdf101016549ba887b9 203 SUPERFAMILY SSF52317 3 188 2.85E-19 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_010505 7e98278178503bdf101016549ba887b9 203 Pfam PF03575 Peptidase family S51 4 203 3.0E-24 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_009635 4f3d9abe0b745fac3972135080da4263 124 SUPERFAMILY SSF46955 2 115 3.0E-30 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_009635 4f3d9abe0b745fac3972135080da4263 124 Gene3D G3DSA:1.10.1660.10 1 123 5.1E-33 T 11-10-2018 ABE28_009635 4f3d9abe0b745fac3972135080da4263 124 SMART SM00422 2 70 7.9E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_009635 4f3d9abe0b745fac3972135080da4263 124 Pfam PF13411 MerR HTH family regulatory protein 2 68 1.5E-20 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_023545 84426035526acbaf94b9409688145ccd 130 Pfam PF05025 RbsD / FucU transport protein family 1 128 1.2E-45 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 ABE28_023545 84426035526acbaf94b9409688145ccd 130 Gene3D G3DSA:3.40.1650.10 8 127 4.6E-37 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 ABE28_023545 84426035526acbaf94b9409688145ccd 130 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 130 31.449 T 11-10-2018 IPR023064 D-ribose pyranase GO:0016872 ABE28_023545 84426035526acbaf94b9409688145ccd 130 SUPERFAMILY SSF102546 1 130 5.89E-42 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 ABE28_003695 31ad387d922ed35d5cd9bcc69f480ec2 363 Pfam PF06081 Aromatic acid exporter family member 1 1 142 5.1E-40 T 11-10-2018 IPR010343 Aromatic acid exporter family member 1 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 SUPERFAMILY SSF47323 432 556 4.05E-37 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Pfam PF00750 tRNA synthetases class I (R) 104 401 4.7E-28 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 SMART SM01016 9 95 1.6E-34 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 2.2E-25 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Gene3D G3DSA:3.30.1360.70 2 113 6.2E-29 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 SUPERFAMILY SSF52374 117 448 8.16E-97 T 11-10-2018 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Gene3D G3DSA:3.40.50.620 124 431 6.5E-178 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 1.4E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 1.4E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 1.4E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 1.4E-24 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Pfam PF05746 DALR anticodon binding domain 438 556 7.2E-41 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 556 1.3E-175 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Gene3D G3DSA:1.10.730.10 432 556 6.5E-178 T 11-10-2018 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.436 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 SMART SM00836 437 556 5.2E-56 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABE28_023040 4cb14ed55819d6dd4fae9692253791d8 556 SUPERFAMILY SSF55190 2 115 6.41E-27 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_014725 b18147eefae517a8990194735844452d 263 Pfam PF00106 short chain dehydrogenase 7 194 4.1E-55 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 3.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 3.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 3.0E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PIRSF PIRSF000126 2 256 3.8E-60 T 11-10-2018 ABE28_014725 b18147eefae517a8990194735844452d 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_014725 b18147eefae517a8990194735844452d 263 Gene3D G3DSA:3.40.50.720 1 262 1.1E-70 T 11-10-2018 ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 3.2E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.2E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.2E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.2E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.2E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_014725 b18147eefae517a8990194735844452d 263 SUPERFAMILY SSF51735 2 253 3.13E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010825 137e853bd58184dd853f555b4086a818 339 Pfam PF05913 Bacterial protein of unknown function (DUF871) 2 331 7.1E-96 T 11-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic ABE28_010825 137e853bd58184dd853f555b4086a818 339 Gene3D G3DSA:3.20.20.70 1 229 7.4E-69 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_010825 137e853bd58184dd853f555b4086a818 339 SUPERFAMILY SSF50891 236 334 1.67E-25 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_010825 137e853bd58184dd853f555b4086a818 339 SUPERFAMILY SSF51445 2 226 3.79E-58 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_010825 137e853bd58184dd853f555b4086a818 339 Gene3D G3DSA:2.40.100.10 230 339 1.3E-30 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 PIRSF PIRSF000521 109 446 4.1E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 PIRSF PIRSF000521 1 136 8.5E-8 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 SUPERFAMILY SSF53383 19 443 4.75E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 12 448 1.5E-178 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 Pfam PF00202 Aminotransferase class-III 30 443 5.0E-97 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 Gene3D G3DSA:3.40.640.10 66 334 1.9E-139 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_023585 2f5f1ceec020d2209653d818bf77b2ad 450 Gene3D G3DSA:3.90.1150.10 11 441 1.9E-139 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_020505 2c9a0fec8a6bcd0bff069f903dd555a1 468 Gene3D G3DSA:3.90.640.20 151 221 3.0E-8 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily ABE28_020505 2c9a0fec8a6bcd0bff069f903dd555a1 468 Pfam PF01522 Polysaccharide deacetylase 269 387 4.1E-34 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_020505 2c9a0fec8a6bcd0bff069f903dd555a1 468 Gene3D G3DSA:3.20.20.370 236 461 2.9E-70 T 11-10-2018 ABE28_020505 2c9a0fec8a6bcd0bff069f903dd555a1 468 SUPERFAMILY SSF88713 265 454 5.12E-61 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_011740 b28ac39ea731f6a0ba0c3965f73b5e24 399 Pfam PF07690 Major Facilitator Superfamily 9 240 3.5E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_011740 b28ac39ea731f6a0ba0c3965f73b5e24 399 SUPERFAMILY SSF103473 4 391 1.09E-44 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011740 b28ac39ea731f6a0ba0c3965f73b5e24 399 Gene3D G3DSA:1.20.1250.20 209 397 1.5E-13 T 11-10-2018 ABE28_011740 b28ac39ea731f6a0ba0c3965f73b5e24 399 Gene3D G3DSA:1.20.1250.20 1 191 2.4E-18 T 11-10-2018 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 SMART SM00271 4 61 2.8E-30 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Gene3D G3DSA:2.10.230.10 141 205 2.6E-36 T 11-10-2018 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 PRINTS PR00625 DnaJ domain signature 41 61 9.3E-30 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 PRINTS PR00625 DnaJ domain signature 7 25 9.3E-30 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 PRINTS PR00625 DnaJ domain signature 25 40 9.3E-30 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 PRINTS PR00625 DnaJ domain signature 61 80 9.3E-30 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Gene3D G3DSA:2.60.260.20 111 247 2.6E-36 T 11-10-2018 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Gene3D G3DSA:2.60.260.20 253 359 1.8E-30 T 11-10-2018 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Pfam PF00684 DnaJ central domain 141 205 4.1E-14 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 SUPERFAMILY SSF49493 108 254 1.02E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Gene3D G3DSA:1.10.287.110 1 106 8.7E-38 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 SUPERFAMILY SSF49493 256 342 3.92E-26 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 SUPERFAMILY SSF46565 1 100 7.59E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 SUPERFAMILY SSF57938 128 209 1.03E-18 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Pfam PF01556 DnaJ C terminal domain 114 331 1.2E-44 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Pfam PF00226 DnaJ domain 5 66 8.1E-26 T 11-10-2018 IPR001623 DnaJ domain ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 1.2E-141 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 368 41.328 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 ABE28_015505 72fe0dea31d5ba884d750fe1e8b6d8ee 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 11-10-2018 IPR018253 DnaJ domain, conserved site ABE28_014835 3438840e2ef49e2f68f766b0821937f5 145 Pfam PF06491 Disulphide isomerase 9 142 3.6E-61 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_014835 3438840e2ef49e2f68f766b0821937f5 145 Gene3D G3DSA:3.40.30.10 25 142 2.7E-54 T 11-10-2018 ABE28_014835 3438840e2ef49e2f68f766b0821937f5 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 9 142 3.5E-62 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 Gene3D G3DSA:3.30.428.10 1 140 4.7E-51 T 11-10-2018 IPR036265 HIT-like superfamily ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 PRINTS PR00332 Histidine triad family signature 5 21 3.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 PRINTS PR00332 Histidine triad family signature 26 44 3.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 PRINTS PR00332 Histidine triad family signature 93 103 3.4E-18 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 SUPERFAMILY SSF54197 2 139 2.69E-48 T 11-10-2018 IPR036265 HIT-like superfamily ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 Pfam PF01230 HIT domain 12 106 4.4E-28 T 11-10-2018 IPR001310 Histidine triad (HIT) protein ABE28_005750 05640a05eb06de0cfac514ef163eb882 140 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 11-10-2018 IPR019808 Histidine triad, conserved site ABE28_010850 f0af214cfd998f7a52d434c0e2712b11 347 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 133 237 5.5E-18 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_010850 f0af214cfd998f7a52d434c0e2712b11 347 Gene3D G3DSA:3.40.50.720 5 316 5.1E-133 T 11-10-2018 ABE28_010850 f0af214cfd998f7a52d434c0e2712b11 347 SUPERFAMILY SSF51735 3 199 1.13E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010850 f0af214cfd998f7a52d434c0e2712b11 347 Gene3D G3DSA:3.30.360.10 122 339 5.1E-133 T 11-10-2018 ABE28_010850 f0af214cfd998f7a52d434c0e2712b11 347 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 6.8E-23 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SMART SM01231 303 363 2.3E-17 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SUPERFAMILY SSF55052 169 250 3.4E-22 T 11-10-2018 IPR035891 CheY-binding domain of CheA ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Pfam PF01627 Hpt domain 5 97 2.4E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SUPERFAMILY SSF50341 550 682 3.14E-31 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 411 550 3.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SMART SM00073 3 100 4.8E-36 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SUPERFAMILY SSF47226 2 113 5.89E-32 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:2.30.30.40 551 677 1.8E-37 T 11-10-2018 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:2.40.50.180 574 637 1.8E-37 T 11-10-2018 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:1.10.287.560 303 363 4.3E-20 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Pfam PF07194 P2 response regulator binding domain 173 249 1.2E-24 T 11-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:3.30.565.10 364 550 2.2E-61 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:1.20.120.160 2 137 2.2E-39 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 303 362 1.1E-12 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SUPERFAMILY SSF47384 304 364 2.82E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Pfam PF01584 CheW-like domain 556 682 8.1E-24 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SMART SM00260 543 682 4.7E-36 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 Gene3D G3DSA:3.30.70.1110 169 253 3.3E-30 T 11-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 467 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 548 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 529 2.9E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SUPERFAMILY SSF55874 365 549 1.57E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008065 eaafb322e6a1cda30d602b6f9f67cd7a 683 SMART SM00387 408 551 8.6E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005055 d6132ea60c86a34bb78b503bd06e0709 115 Pfam PF07883 Cupin domain 34 100 2.0E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_005055 d6132ea60c86a34bb78b503bd06e0709 115 Gene3D G3DSA:2.60.120.10 1 107 5.7E-27 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_005055 d6132ea60c86a34bb78b503bd06e0709 115 SUPERFAMILY SSF51182 27 111 6.88E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Gene3D G3DSA:3.40.50.300 129 312 1.5E-57 T 11-10-2018 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Gene3D G3DSA:3.30.450.20 9 120 2.2E-16 T 11-10-2018 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Gene3D G3DSA:1.10.8.60 313 393 6.8E-23 T 11-10-2018 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 SUPERFAMILY SSF46689 355 464 4.78E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 SUPERFAMILY SSF52540 143 386 5.77E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Gene3D G3DSA:1.10.10.60 421 465 3.8E-16 T 11-10-2018 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Pfam PF02954 Bacterial regulatory protein, Fis family 423 462 2.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Pfam PF00158 Sigma-54 interaction domain 143 308 9.8E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 Pfam PF13426 PAS domain 20 120 9.9E-12 T 11-10-2018 IPR000014 PAS domain ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 13 124 9.5E-12 T 11-10-2018 IPR000014 PAS domain ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 3.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 3.7E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 SUPERFAMILY SSF55785 13 115 1.37E-12 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_018000 f116ae9a538a4eddb89bc2c58594fe0d 465 SMART SM00382 163 305 5.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000295 6eceefce9ef9e5f7bfc14db5d49dd407 87 SUPERFAMILY SSF55174 1 76 9.42E-21 T 11-10-2018 ABE28_000295 6eceefce9ef9e5f7bfc14db5d49dd407 87 SMART SM00363 1 63 2.7E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000295 6eceefce9ef9e5f7bfc14db5d49dd407 87 Gene3D G3DSA:3.10.290.10 1 87 3.2E-25 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_000295 6eceefce9ef9e5f7bfc14db5d49dd407 87 PIRSF PIRSF038881 1 87 1.7E-33 T 11-10-2018 IPR025490 RNA-binding protein, HP1423 type ABE28_000295 6eceefce9ef9e5f7bfc14db5d49dd407 87 Pfam PF01479 S4 domain 1 47 1.2E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 SUPERFAMILY SSF46689 5 55 2.77E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 Pfam PF12833 Helix-turn-helix domain 27 105 7.0E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 Gene3D G3DSA:1.10.10.60 58 111 3.9E-14 T 11-10-2018 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 SUPERFAMILY SSF46689 57 107 3.49E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 Gene3D G3DSA:3.20.80.10 128 288 6.5E-52 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 SUPERFAMILY SSF55136 128 288 6.02E-32 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 Pfam PF06445 GyrI-like small molecule binding domain 128 287 2.1E-29 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 9.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 9.7E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 SMART SM00342 21 104 9.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 SMART SM00871 128 287 3.8E-38 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding ABE28_017400 eefe1678fbc0aa96a5ed9791c603ea8a 289 Gene3D G3DSA:1.10.10.60 4 57 2.8E-15 T 11-10-2018 ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Gene3D G3DSA:3.40.710.10 375 704 1.4E-132 T 11-10-2018 ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Gene3D G3DSA:1.10.3810.10 106 314 1.5E-66 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Pfam PF00905 Penicillin binding protein transpeptidase domain 418 659 3.2E-24 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Pfam PF00912 Transglycosylase 98 282 1.0E-54 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Gene3D G3DSA:2.60.40.10 837 906 3.4E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 SUPERFAMILY SSF53955 82 305 3.09E-62 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 SUPERFAMILY SSF56601 267 740 1.47E-100 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_017295 7782308011eef682b23bc63a5b20ed90 1011 Gene3D G3DSA:1.10.20.80 318 597 1.4E-132 T 11-10-2018 ABE28_000050 ac4e3f357efe5cd40acfab7c3980c23c 181 Gene3D G3DSA:3.40.50.850 1 177 1.7E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_000050 ac4e3f357efe5cd40acfab7c3980c23c 181 SUPERFAMILY SSF52499 8 170 5.1E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_000050 ac4e3f357efe5cd40acfab7c3980c23c 181 Pfam PF00857 Isochorismatase family 10 169 3.3E-31 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABE28_006530 4ac2eae926c46aab7c8f5c84131783af 465 Gene3D G3DSA:3.90.1720.10 292 462 5.8E-38 T 11-10-2018 ABE28_006530 4ac2eae926c46aab7c8f5c84131783af 465 Pfam PF00877 NlpC/P60 family 355 459 9.0E-27 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_006530 4ac2eae926c46aab7c8f5c84131783af 465 SUPERFAMILY SSF57997 40 116 2.94E-5 T 11-10-2018 ABE28_006530 4ac2eae926c46aab7c8f5c84131783af 465 SUPERFAMILY SSF54001 334 459 3.68E-31 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_006530 4ac2eae926c46aab7c8f5c84131783af 465 Gene3D G3DSA:1.20.5.340 25 132 8.0E-6 T 11-10-2018 ABE28_003980 aa0b882128606a73d65f10bf5fc28086 59 Gene3D G3DSA:4.10.810.10 8 59 3.4E-15 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 ABE28_003980 aa0b882128606a73d65f10bf5fc28086 59 Pfam PF08858 IDEAL domain 19 53 1.5E-8 T 11-10-2018 IPR014957 IDEAL domain ABE28_003980 aa0b882128606a73d65f10bf5fc28086 59 SMART SM00914 19 55 4.7E-6 T 11-10-2018 IPR014957 IDEAL domain ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:2.170.120.12 50 170 5.9E-87 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 1.2E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 5.0E-25 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 21 313 3.1E-123 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF56553 50 171 1.24E-42 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF55257 5 230 3.14E-31 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 SMART SM00662 20 227 4.8E-102 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 2.1E-29 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 36.877 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:3.30.1360.10 17 221 5.9E-87 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 SUPERFAMILY SSF47789 247 313 1.31E-24 T 11-10-2018 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 151 3.6E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000715 70cd8e08a2a610f85706ecdd56ea9119 314 Gene3D G3DSA:1.10.150.20 237 314 2.0E-34 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 828 1250 3.9E-97 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:2.40.50.140 223 324 2.1E-31 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:3.30.1900.20 976 1098 2.6E-59 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 SMART SM00479 424 590 3.2E-52 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF00929 Exonuclease 426 580 2.8E-40 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 420 639 2.9E-60 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:1.10.100.20 998 1045 2.6E-59 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF14579 Helix-hairpin-helix motif 1356 1433 8.3E-10 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 SMART SM00481 339 406 2.4E-25 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 234 1440 0.0 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:1.10.150.700 1236 1289 5.6E-15 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:1.10.150.700 1099 1192 2.0E-36 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 SUPERFAMILY SSF53098 424 880 1.82E-105 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF11490 DNA polymerase III polC-type N-terminus II 97 209 3.4E-24 T 11-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 SUPERFAMILY SSF50249 241 323 2.1E-10 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:3.20.20.140 334 418 3.6E-21 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:3.30.420.10 419 558 6.5E-44 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:3.20.20.140 559 806 4.8E-59 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF02811 PHP domain 340 697 1.2E-51 T 11-10-2018 IPR004013 PHP domain GO:0003824 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1440 447.32 T 11-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Gene3D G3DSA:1.10.150.870 1290 1426 4.4E-52 T 11-10-2018 ABE28_008140 2f866488f8b72ab93de82aa198956127 1440 Pfam PF14480 DNA polymerase III polC-type N-terminus I 11 83 4.2E-15 T 11-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 5 334 63.856 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 7 316 4.1E-131 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 134 146 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 80 100 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 101 120 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 157 178 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 266 275 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 8 21 2.5E-50 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 Gene3D G3DSA:3.30.420.40 7 318 3.8E-121 T 11-10-2018 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 ProSitePatterns PS01016 Glycoprotease family signature. 100 120 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 SUPERFAMILY SSF53067 105 311 1.57E-42 T 11-10-2018 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 Pfam PF00814 Glycoprotease family 27 309 2.2E-102 T 11-10-2018 IPR000905 Gcp-like domain ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 8 309 1.7E-104 T 11-10-2018 IPR017861 Kae1/TsaD family ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 Gene3D G3DSA:3.30.420.40 132 296 3.8E-121 T 11-10-2018 ABE28_001540 b7c3f3fcb56f152449b2f87b70e56620 336 SUPERFAMILY SSF53067 6 126 9.71E-31 T 11-10-2018 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 SUPERFAMILY SSF53383 111 478 1.35E-85 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 Gene3D G3DSA:3.90.1150.10 117 476 1.1E-99 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 Gene3D G3DSA:3.40.640.10 153 372 1.1E-99 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 Pfam PF00155 Aminotransferase class I and II 119 470 4.9E-32 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 SMART SM00345 17 76 3.5E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 SUPERFAMILY SSF46785 6 86 1.3E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 Gene3D G3DSA:1.10.10.10 2 77 4.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.9E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_022645 944edc38f8647d61b3d001b46496b3dd 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.6E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001180 1dcdcc1ea4d6936dd12b3bb95d29a01f 481 Pfam PF07690 Major Facilitator Superfamily 15 404 5.1E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001180 1dcdcc1ea4d6936dd12b3bb95d29a01f 481 SUPERFAMILY SSF103473 8 456 2.09E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001180 1dcdcc1ea4d6936dd12b3bb95d29a01f 481 Gene3D G3DSA:1.20.1720.10 10 216 9.4E-52 T 11-10-2018 ABE28_001180 1dcdcc1ea4d6936dd12b3bb95d29a01f 481 Gene3D G3DSA:1.20.1250.20 254 459 9.1E-14 T 11-10-2018 ABE28_001180 1dcdcc1ea4d6936dd12b3bb95d29a01f 481 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 8 412 9.4E-90 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 SUPERFAMILY SSF50182 117 179 1.08E-14 T 11-10-2018 IPR010920 LSM domain superfamily ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 Gene3D G3DSA:3.30.70.100 183 268 1.2E-15 T 11-10-2018 ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 SUPERFAMILY SSF82861 33 115 1.83E-15 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 SUPERFAMILY SSF82689 186 269 2.75E-5 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 Pfam PF00924 Mechanosensitive ion channel 74 269 7.1E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABE28_023745 1eaf27aa22cd02d0d5ece00d83c91d7b 278 Gene3D G3DSA:2.30.30.60 132 180 3.1E-21 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.9E-140 T 11-10-2018 IPR033752 MetA family ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.7E-135 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-111 T 11-10-2018 ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 SUPERFAMILY SSF52317 17 297 9.16E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 Gene3D G3DSA:3.40.50.880 1 301 6.3E-129 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 43.067 T 11-10-2018 IPR033752 MetA family ABE28_013460 9103e8d8e0c7291cae26d8b9c417c2ca 302 PIRSF PIRSF000450 1 302 3.6E-150 T 11-10-2018 IPR033752 MetA family ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 38 53 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 3.9E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 SUPERFAMILY SSF53474 8 261 9.59E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 Pfam PF12146 Serine aminopeptidase, S33 9 244 6.3E-57 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ABE28_020645 ab3ff8f98e906a3fe6a05a396f692a6c 267 Gene3D G3DSA:3.40.50.1820 1 262 2.1E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 Gene3D G3DSA:3.40.50.2300 64 310 1.1E-86 T 11-10-2018 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.6E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 Gene3D G3DSA:1.10.260.40 2 61 1.9E-27 T 11-10-2018 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 Gene3D G3DSA:3.40.50.2300 162 291 1.1E-86 T 11-10-2018 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 SUPERFAMILY SSF53822 63 334 1.73E-82 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.4E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 SUPERFAMILY SSF47413 2 61 2.19E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 TIGRFAM TIGR01481 ccpA: catabolite control protein A 3 334 8.3E-160 T 11-10-2018 IPR006377 Catabolite control protein A GO:0006355 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 SMART SM00354 3 73 1.3E-37 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 Pfam PF13377 Periplasmic binding protein-like domain 171 333 1.3E-32 T 11-10-2018 ABE28_017325 97b6601ad2ab045cba19bc645196ee8d 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 3.1E-61 T 11-10-2018 ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 Gene3D G3DSA:3.40.50.720 1 258 6.3E-79 T 11-10-2018 ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.9E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.7E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 1.2E-110 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ABE28_018525 b58a8dbbda5dbca5d8e67ad1fbee5793 258 SUPERFAMILY SSF51735 3 257 7.4E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 SUPERFAMILY SSF81324 14 140 7.46E-26 T 11-10-2018 ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 Pfam PF07885 Ion channel 23 97 2.1E-16 T 11-10-2018 IPR013099 Potassium channel domain ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 Gene3D G3DSA:1.10.287.70 7 99 4.2E-23 T 11-10-2018 ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 Pfam PF02254 TrkA-N domain 118 239 7.7E-15 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 Gene3D G3DSA:3.40.50.720 115 255 2.5E-25 T 11-10-2018 ABE28_021300 71dcbb07eda939842395e5f720d67aa7 330 SUPERFAMILY SSF51735 116 251 1.28E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021845 62071d6e519c778e252dd8285e8a099b 390 Pfam PF01098 Cell cycle protein 13 381 1.8E-95 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_021845 62071d6e519c778e252dd8285e8a099b 390 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 12 380 2.7E-101 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_021845 62071d6e519c778e252dd8285e8a099b 390 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_018100 8f087174b07af159115ab1c58785c743 246 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 245 1.1E-84 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.4E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.4E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.4E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.4E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 Hamap MF_01974 Methionine aminopeptidase [map]. 1 246 32.681 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_018100 8f087174b07af159115ab1c58785c743 246 Gene3D G3DSA:3.90.230.10 1 246 1.7E-83 T 11-10-2018 ABE28_018100 8f087174b07af159115ab1c58785c743 246 SUPERFAMILY SSF55920 3 245 1.31E-67 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_018100 8f087174b07af159115ab1c58785c743 246 Pfam PF00557 Metallopeptidase family M24 12 238 1.2E-43 T 11-10-2018 IPR000994 Peptidase M24 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 433 5.2E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 581 9.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 543 9.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 544 562 9.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 PRINTS PR00344 Bacterial sensor protein C-terminal signature 515 529 9.6E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 478 583 2.9E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Pfam PF02743 Cache domain 52 271 1.6E-15 T 11-10-2018 IPR033479 Double Cache domain 1 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 SUPERFAMILY SSF47384 367 434 1.94E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Gene3D G3DSA:1.10.287.130 356 432 2.4E-19 T 11-10-2018 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Gene3D G3DSA:3.30.450.20 80 173 4.4E-20 T 11-10-2018 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 SUPERFAMILY SSF55874 427 582 2.62E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 SMART SM00388 371 437 1.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 SUPERFAMILY SSF103190 89 181 1.47E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 Gene3D G3DSA:3.30.565.10 433 582 2.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013240 c052a451dac5960a0843331d01ebe38c 588 SMART SM00387 478 584 5.1E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 474 484 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 Pfam PF02225 PA domain 349 412 3.0E-12 T 11-10-2018 IPR003137 PA domain ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 Pfam PF00082 Subtilase family 135 528 1.7E-66 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 184 194 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 SUPERFAMILY SSF52025 328 421 8.63E-14 T 11-10-2018 ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 193 5.7E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 135 154 5.7E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 PRINTS PR00723 Subtilisin serine protease family (S8) signature 473 489 5.7E-20 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 SUPERFAMILY SSF52743 130 538 2.88E-82 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 140 151 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_022870 abf2a879f24e1378f0c1d161acd0a7ec 742 Gene3D G3DSA:3.50.30.30 312 432 6.8E-25 T 11-10-2018 ABE28_005575 2e93ecaa1151286e6dacc40633d6c0e5 67 PIRSF PIRSF037692 1 67 3.2E-28 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 ABE28_005575 2e93ecaa1151286e6dacc40633d6c0e5 67 Pfam PF17277 Family of unknown function (DUF5342) 1 67 1.6E-29 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 ABE28_005575 2e93ecaa1151286e6dacc40633d6c0e5 67 ProDom PD056348 YHEE BH1143 1 67 9.0E-17 T 11-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 ABE28_014440 19963f04a9561201b3f2b860640e8871 503 Pfam PF00270 DEAD/DEAH box helicase 18 177 1.3E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_014440 19963f04a9561201b3f2b860640e8871 503 Gene3D G3DSA:3.40.50.300 1 197 3.7E-68 T 11-10-2018 ABE28_014440 19963f04a9561201b3f2b860640e8871 503 SMART SM00490 241 323 5.9E-25 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_014440 19963f04a9561201b3f2b860640e8871 503 SMART SM00487 12 205 4.2E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014440 19963f04a9561201b3f2b860640e8871 503 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 345 4.5E-107 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ABE28_014440 19963f04a9561201b3f2b860640e8871 503 Pfam PF16124 RecQ zinc-binding 411 461 4.9E-6 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ABE28_014440 19963f04a9561201b3f2b860640e8871 503 SUPERFAMILY SSF52540 23 335 7.55E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014440 19963f04a9561201b3f2b860640e8871 503 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 130 139 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site ABE28_014440 19963f04a9561201b3f2b860640e8871 503 Pfam PF00271 Helicase conserved C-terminal domain 218 321 1.2E-18 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_013675 71a6ae80bf412e09daf6c14510e4b9e8 109 PIRSF PIRSF000699 1 109 1.4E-33 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_013675 71a6ae80bf412e09daf6c14510e4b9e8 109 Gene3D G3DSA:1.20.58.280 2 108 3.9E-36 T 11-10-2018 ABE28_013675 71a6ae80bf412e09daf6c14510e4b9e8 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 12 103 2.4E-33 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_013675 71a6ae80bf412e09daf6c14510e4b9e8 109 SUPERFAMILY SSF46973 6 104 4.58E-33 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 ABE28_018290 b9af6a577b6f807af3623566a1ca3a75 284 SMART SM00849 22 220 5.3E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_018290 b9af6a577b6f807af3623566a1ca3a75 284 Pfam PF00753 Metallo-beta-lactamase superfamily 28 220 9.9E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_018290 b9af6a577b6f807af3623566a1ca3a75 284 SUPERFAMILY SSF56281 25 234 6.94E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_018290 b9af6a577b6f807af3623566a1ca3a75 284 Gene3D G3DSA:3.60.15.10 2 245 2.2E-32 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017495 d7b207924ab8c4517fb4fec5c6956855 129 Pfam PF09350 Domain of unknown function (DUF1992) 16 71 1.1E-5 T 11-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain ABE28_006505 6ed4acf03290d45716f584790b83cdfd 217 Gene3D G3DSA:3.40.50.620 2 216 5.6E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_006505 6ed4acf03290d45716f584790b83cdfd 217 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 212 20.938 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABE28_006505 6ed4acf03290d45716f584790b83cdfd 217 Pfam PF01467 Cytidylyltransferase-like 6 185 1.4E-19 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_006505 6ed4acf03290d45716f584790b83cdfd 217 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 211 1.4E-41 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABE28_006505 6ed4acf03290d45716f584790b83cdfd 217 SUPERFAMILY SSF52374 2 212 6.62E-39 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Pfam PF11799 impB/mucB/samB family C-terminal domain 249 354 6.4E-20 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Gene3D G3DSA:2.30.40.20 29 82 5.1E-60 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 SUPERFAMILY SSF100879 249 346 1.96E-23 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 PIRSF PIRSF036603 122 376 2.2E-15 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 PIRSF PIRSF036603 4 126 3.6E-26 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 SUPERFAMILY SSF56672 7 242 8.27E-84 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Hamap MF_01113 DNA polymerase IV [dinB]. 9 361 37.39 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Gene3D G3DSA:3.30.1490.100 250 355 2.1E-22 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Gene3D G3DSA:3.30.70.270 12 172 5.1E-60 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Pfam PF11798 IMS family HHH motif 176 205 1.9E-7 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Gene3D G3DSA:1.10.150.20 178 243 3.1E-12 T 11-10-2018 ABE28_014790 72560eaae4bfd1f581b695f6f26e2fba 424 Pfam PF00817 impB/mucB/samB family 15 162 3.3E-52 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Gene3D G3DSA:3.40.50.720 3 89 1.8E-21 T 11-10-2018 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 SUPERFAMILY SSF51984 3 88 2.88E-21 T 11-10-2018 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Gene3D G3DSA:3.90.190.20 293 432 5.9E-39 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 35.107 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 376 4.0E-17 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 SUPERFAMILY SSF53623 87 293 2.62E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Pfam PF08245 Mur ligase middle domain 106 275 1.3E-23 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Pfam PF01225 Mur ligase family, catalytic domain 4 101 4.5E-23 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 425 1.6E-132 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 Gene3D G3DSA:3.40.1190.10 91 292 7.0E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_017365 32328e73601440e467051b58ef08cfc7 434 SUPERFAMILY SSF53244 294 427 5.13E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_022565 514fdddf18df1a4ea81eda11eca69b6e 387 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 26 387 2.7E-80 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ABE28_022565 514fdddf18df1a4ea81eda11eca69b6e 387 Gene3D G3DSA:3.40.50.11820 34 380 2.5E-69 T 11-10-2018 ABE28_022565 514fdddf18df1a4ea81eda11eca69b6e 387 Gene3D G3DSA:3.40.50.12580 199 373 2.5E-69 T 11-10-2018 ABE28_022565 514fdddf18df1a4ea81eda11eca69b6e 387 SUPERFAMILY SSF53756 43 386 1.73E-22 T 11-10-2018 ABE28_003735 bc4b4949b56b20aa2c931fea2d20c486 184 Gene3D G3DSA:1.10.443.10 12 182 6.9E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_003735 bc4b4949b56b20aa2c931fea2d20c486 184 Pfam PF00589 Phage integrase family 30 169 5.3E-23 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_003735 bc4b4949b56b20aa2c931fea2d20c486 184 SUPERFAMILY SSF56349 6 177 1.97E-32 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 8.4E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 66 82 8.4E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 87 100 8.4E-17 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 7 102 17.441 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 Pfam PF02049 Flagellar hook-basal body complex protein FliE 19 102 2.5E-29 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_007940 9881a7f35056ba3029c2d6ff1f97ecbd 102 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 27 102 1.7E-26 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 ABE28_006120 8495ad7418793dfca084ceaf4d58c220 381 SUPERFAMILY SSF51445 106 259 1.86E-6 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_006120 8495ad7418793dfca084ceaf4d58c220 381 Pfam PF13200 Putative glycosyl hydrolase domain 51 373 1.7E-127 T 11-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 Pfam PF08439 Oligopeptidase F 120 189 2.4E-23 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain ABE28_006160 15dda9c017305e220b232aaac5378faf 605 Pfam PF01432 Peptidase family M3 211 590 3.5E-85 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 Gene3D G3DSA:1.20.140.70 30 185 4.5E-51 T 11-10-2018 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 13 601 8.8E-217 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 SUPERFAMILY SSF55486 61 604 5.63E-143 T 11-10-2018 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 Gene3D G3DSA:1.10.287.830 187 233 1.1E-21 T 11-10-2018 ABE28_006160 15dda9c017305e220b232aaac5378faf 605 Gene3D G3DSA:1.10.1370.20 234 605 1.1E-145 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Pfam PF00679 Elongation factor G C-terminus 401 481 2.1E-24 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Gene3D G3DSA:2.40.50.250 487 603 4.0E-129 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Gene3D G3DSA:3.30.70.240 393 486 4.0E-129 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Pfam PF14492 Elongation Factor G, domain II 332 381 4.3E-7 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Gene3D G3DSA:2.40.30.10 203 303 1.2E-32 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 SUPERFAMILY SSF50447 154 303 1.06E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 156 1.9E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 SUPERFAMILY SSF52540 3 211 3.19E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Pfam PF00009 Elongation factor Tu GTP binding domain 5 199 1.7E-56 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 SMART SM00838 399 487 5.5E-4 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 SUPERFAMILY SSF54980 402 517 5.28E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Gene3D G3DSA:3.30.70.870 310 594 4.0E-129 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Gene3D G3DSA:3.40.50.300 4 202 5.9E-66 T 11-10-2018 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 Pfam PF03144 Elongation factor Tu domain 2 223 293 1.1E-10 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 603 6.6E-288 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ABE28_007250 e01bfdf7c284654b77a6bf159a4c1dad 615 SUPERFAMILY SSF54980 306 391 5.04E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Gene3D G3DSA:3.40.50.970 332 539 7.4E-80 T 11-10-2018 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 339 8.5E-152 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Pfam PF02780 Transketolase, C-terminal domain 550 657 1.4E-8 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 SUPERFAMILY SSF52518 342 528 1.02E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 SUPERFAMILY SSF52922 535 667 6.81E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 SMART SM00861 355 526 2.1E-69 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Gene3D G3DSA:3.40.50.970 4 331 8.8E-125 T 11-10-2018 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Pfam PF02779 Transketolase, pyrimidine binding domain 355 525 1.8E-44 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 666 2.7E-300 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 Gene3D G3DSA:3.40.50.920 541 667 5.6E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_009965 4dfe8d6e0958466a83bdea25bb9c94b9 667 SUPERFAMILY SSF52518 8 326 8.13E-115 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 SMART SM00347 30 130 6.3E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 6.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 6.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 6.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 SUPERFAMILY SSF46785 15 145 1.17E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 Pfam PF01047 MarR family 37 95 1.7E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_016645 39e167fd09e97cd27b5349f1dbee3cb8 147 Gene3D G3DSA:1.10.10.10 2 147 1.3E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SUPERFAMILY SSF47384 202 274 1.47E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SUPERFAMILY SSF55785 81 193 3.84E-17 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SMART SM00388 214 277 1.4E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 79 198 9.2E-13 T 11-10-2018 IPR000014 PAS domain ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SMART SM00387 319 425 2.7E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Gene3D G3DSA:3.30.565.10 280 425 3.6E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SMART SM00091 76 142 0.0023 T 11-10-2018 IPR000014 PAS domain ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Gene3D G3DSA:3.30.450.20 76 205 5.4E-19 T 11-10-2018 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Pfam PF00512 His Kinase A (phospho-acceptor) domain 217 274 1.3E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Pfam PF00989 PAS fold 80 186 1.2E-11 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 384 2.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 356 370 2.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 2.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 2.6E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 SUPERFAMILY SSF55874 266 426 4.32E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Gene3D G3DSA:1.10.287.130 217 274 5.7E-16 T 11-10-2018 ABE28_006820 3753a893aa7926b4fb03a58c43e8cc07 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 423 3.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_007525 9e9aa34664d283bbaad38750da6795c3 260 Pfam PF08478 POTRA domain, FtsQ-type 52 118 4.6E-17 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type ABE28_007525 9e9aa34664d283bbaad38750da6795c3 260 Pfam PF03799 Cell division protein FtsQ 122 238 1.1E-9 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB ABE28_007525 9e9aa34664d283bbaad38750da6795c3 260 Hamap MF_00912 Cell division protein DivIB [divIB]. 9 252 29.38 T 11-10-2018 IPR026580 Cell division protein DivIB ABE28_007525 9e9aa34664d283bbaad38750da6795c3 260 Gene3D G3DSA:3.40.50.10960 115 233 7.5E-41 T 11-10-2018 ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 Pfam PF02464 Competence-damaged protein 257 408 7.0E-50 T 11-10-2018 IPR008136 CinA, C-terminal ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 SUPERFAMILY SSF142433 250 408 6.93E-49 T 11-10-2018 IPR036653 CinA-like, C-terminal ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 SMART SM00852 4 170 2.7E-39 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 Pfam PF00994 Probable molybdopterin binding domain 4 162 9.7E-35 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 2 160 8.0E-32 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 Gene3D G3DSA:3.90.950.20 249 409 5.5E-52 T 11-10-2018 IPR036653 CinA-like, C-terminal ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 265 408 2.1E-43 T 11-10-2018 IPR008136 CinA, C-terminal ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 409 2.7E-144 T 11-10-2018 IPR008135 Competence-induced protein CinA ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 PIRSF PIRSF006728 1 410 3.6E-155 T 11-10-2018 IPR008135 Competence-induced protein CinA ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 SUPERFAMILY SSF53218 2 206 1.03E-36 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 410 157.137 T 11-10-2018 IPR008135 Competence-induced protein CinA ABE28_008325 83cbe29cdf96f49e72679edde3b9587d 410 Gene3D G3DSA:3.40.980.10 2 168 1.6E-50 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 PIRSF PIRSF000524 1 364 2.1E-56 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 Pfam PF00266 Aminotransferase class-V 33 324 5.5E-24 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 Gene3D G3DSA:3.90.1150.10 7 350 3.0E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 TIGRFAM TIGR02326 transamin_PhnW: 2-aminoethylphosphonate--pyruvate transaminase 2 360 2.7E-160 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 SUPERFAMILY SSF53383 1 361 3.27E-80 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 Hamap MF_01376 2-aminoethylphosphonate--pyruvate transaminase [phnW]. 1 364 174.728 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 Gene3D G3DSA:3.40.640.10 15 260 3.0E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_017630 517c9cf8b8cab93aec8ae9eccd01f104 364 TIGRFAM TIGR03301 PhnW-AepZ: 2-aminoethylphosphonate aminotransferase 6 358 1.9E-140 T 11-10-2018 IPR012703 2-aminoethylphosphonate--pyruvate transaminase GO:0019700|GO:0047304 KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 Gene3D G3DSA:2.30.40.10 7 419 1.1E-152 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 44.19 T 11-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 17 423 9.4E-151 T 11-10-2018 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 Gene3D G3DSA:3.20.20.140 54 366 1.1E-152 T 11-10-2018 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 SUPERFAMILY SSF51338 1 426 5.91E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 SUPERFAMILY SSF51556 54 367 2.34E-110 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_007620 653834b7ff64ade89dd3af0d78be06b1 427 Pfam PF01979 Amidohydrolase family 51 419 1.7E-50 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_008700 258c04cdf1751eceb85e566e685c2f86 147 Pfam PF07849 Protein of unknown function (DUF1641) 107 128 6.2E-6 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 ABE28_014210 02e744d1f722c8bc287196719f7f1265 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 7 38 2.0E-6 T 11-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 ABE28_014210 02e744d1f722c8bc287196719f7f1265 168 Pfam PF00355 Rieske [2Fe-2S] domain 84 148 6.8E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABE28_014210 02e744d1f722c8bc287196719f7f1265 168 Gene3D G3DSA:2.102.10.10 38 164 2.3E-23 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABE28_014210 02e744d1f722c8bc287196719f7f1265 168 SUPERFAMILY SSF50022 3 159 1.27E-27 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 PIRSF PIRSF002741 4 583 1.3E-86 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 113 135 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 Gene3D G3DSA:3.40.190.10 22 319 3.6E-49 T 11-10-2018 ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 113 501 3.2E-79 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 Gene3D G3DSA:3.10.105.10 320 554 1.5E-80 T 11-10-2018 ABE28_006690 f307d170e19a0fa3147e1bc6afebfbc5 587 SUPERFAMILY SSF53850 58 583 1.28E-110 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SUPERFAMILY SSF54184 649 702 6.67E-12 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Gene3D G3DSA:3.90.1310.10 60 202 3.0E-51 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SUPERFAMILY SSF54184 591 646 2.49E-11 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Pfam PF00905 Penicillin binding protein transpeptidase domain 262 573 7.2E-87 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SMART SM00740 651 705 2.9E-6 T 11-10-2018 IPR005543 PASTA domain ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SMART SM00740 588 648 6.3E-9 T 11-10-2018 IPR005543 PASTA domain ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Gene3D G3DSA:3.40.710.10 229 584 3.9E-100 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Pfam PF03793 PASTA domain 650 703 1.3E-9 T 11-10-2018 IPR005543 PASTA domain ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Pfam PF03793 PASTA domain 596 646 2.8E-11 T 11-10-2018 IPR005543 PASTA domain ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Gene3D G3DSA:2.20.70.70 55 222 3.0E-51 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SUPERFAMILY SSF56601 187 594 1.29E-93 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 SUPERFAMILY SSF56519 55 235 1.7E-40 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Gene3D G3DSA:3.30.70.2110 79 157 3.0E-51 T 11-10-2018 ABE28_007490 6f2108a51a1a4f658b422283af0b0978 720 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 214 4.4E-23 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_016075 223eb263f1e0d08ff45e20d9b4b98973 157 SUPERFAMILY SSF54593 2 147 1.22E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_016075 223eb263f1e0d08ff45e20d9b4b98973 157 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 144 1.1E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_016075 223eb263f1e0d08ff45e20d9b4b98973 157 Gene3D G3DSA:3.10.180.10 1 148 3.5E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 PIRSF PIRSF031134 3 394 1.2E-139 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 Gene3D G3DSA:3.30.200.20 1 118 1.6E-44 T 11-10-2018 ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 35 389 3.4E-129 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 Gene3D G3DSA:3.90.1200.10 119 394 3.3E-96 T 11-10-2018 ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 Pfam PF01636 Phosphotransferase enzyme family 169 264 1.4E-8 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 SUPERFAMILY SSF56112 18 381 4.08E-82 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_013160 2a91171c3f9d224cbb34b55a7d7f91be 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 160.083 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 ABE28_012695 c62cbaa755629ad0d22f86c0438a84d8 83 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 47 1.0E-12 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 ABE28_012695 c62cbaa755629ad0d22f86c0438a84d8 83 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 78 5.0E-29 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 ABE28_012695 c62cbaa755629ad0d22f86c0438a84d8 83 Hamap MF_00506 UPF0180 protein . 1 79 25.154 T 11-10-2018 IPR005370 Uncharacterised protein family UPF0180 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 238 2.6E-81 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Gene3D G3DSA:3.40.50.10090 244 364 1.9E-9 T 11-10-2018 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 SUPERFAMILY SSF69618 251 478 1.57E-19 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Gene3D G3DSA:3.40.1010.10 3 119 3.8E-39 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Pfam PF02602 Uroporphyrinogen-III synthase HemD 395 474 6.7E-8 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Gene3D G3DSA:3.40.50.10090 365 479 4.2E-13 T 11-10-2018 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 214 1.1E-38 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 SUPERFAMILY SSF53790 2 252 1.27E-67 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_017510 bdd5d3e0955f0463f22de6cb7b519b8b 485 Gene3D G3DSA:3.30.950.10 120 243 1.2E-35 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 Gene3D G3DSA:3.50.50.60 35 382 2.3E-48 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 Gene3D G3DSA:2.102.10.10 405 506 5.3E-25 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 490 502 9.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 457 468 9.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 PRINTS PR00162 Rieske 2Fe-2S subunit signature 478 490 9.0E-7 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 Pfam PF00355 Rieske [2Fe-2S] domain 436 505 7.4E-13 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 Gene3D G3DSA:3.30.9.10 128 340 2.3E-48 T 11-10-2018 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 SUPERFAMILY SSF51905 34 390 1.62E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 Pfam PF01266 FAD dependent oxidoreductase 35 380 1.0E-46 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_023365 c6f2aab0e7a08fdc0551aaccf740175b 506 SUPERFAMILY SSF50022 425 505 1.44E-24 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 SMART SM00116 318 366 4.7E-7 T 11-10-2018 IPR000644 CBS domain ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 SMART SM00116 258 306 3.3E-6 T 11-10-2018 IPR000644 CBS domain ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 Gene3D G3DSA:3.10.580.10 248 372 4.1E-37 T 11-10-2018 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 Pfam PF00571 CBS domain 312 363 2.4E-7 T 11-10-2018 IPR000644 CBS domain ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 Pfam PF00571 CBS domain 251 302 3.9E-10 T 11-10-2018 IPR000644 CBS domain ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 Gene3D G3DSA:3.40.50.300 1 240 1.8E-75 T 11-10-2018 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 2.8E-166 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 Pfam PF00005 ABC transporter 18 163 2.9E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 SUPERFAMILY SSF54631 250 372 1.08E-25 T 11-10-2018 ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 SMART SM00382 27 221 7.9E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011935 900f78ca18229b08df5e055480d5ac77 384 SUPERFAMILY SSF52540 1 241 1.17E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011250 911c1c3fceaa1e1640e3b7dba049ab9a 317 SUPERFAMILY SSF103481 212 300 1.27E-11 T 11-10-2018 ABE28_011250 911c1c3fceaa1e1640e3b7dba049ab9a 317 SUPERFAMILY SSF103481 45 141 1.07E-11 T 11-10-2018 ABE28_011250 911c1c3fceaa1e1640e3b7dba049ab9a 317 Pfam PF00892 EamA-like transporter family 151 294 9.6E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_011250 911c1c3fceaa1e1640e3b7dba049ab9a 317 Pfam PF00892 EamA-like transporter family 6 139 1.3E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 267 3.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 SUPERFAMILY SSF55874 271 416 4.14E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 SMART SM00387 313 418 1.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 377 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 415 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 363 2.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 SUPERFAMILY SSF47384 201 267 8.63E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 Pfam PF07694 5TMR of 5TMR-LYT 41 182 1.2E-7 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 SMART SM00388 205 270 2.1E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 Gene3D G3DSA:1.10.287.130 209 267 1.3E-53 T 11-10-2018 ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 Gene3D G3DSA:3.30.565.10 268 415 1.3E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011485 100e956c3aaec19d4b55c295174edf1f 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 314 415 3.6E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 SUPERFAMILY SSF51338 4 444 1.73E-26 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 TIGRFAM TIGR03178 allantoinase: allantoinase 5 444 3.2E-169 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 Pfam PF01979 Amidohydrolase family 55 436 4.6E-34 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 Gene3D G3DSA:3.20.20.140 57 422 1.9E-156 T 11-10-2018 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 59 67 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 SUPERFAMILY SSF51556 58 383 8.09E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 Gene3D G3DSA:2.30.40.10 6 437 1.9E-156 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005045 2111f21c1e5359ecbe633b75f7a092de 450 Hamap MF_01645 Allantoinase [allB]. 3 450 50.259 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 2 184 3.7E-65 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 PIRSF PIRSF000124 1 430 1.5E-144 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Gene3D G3DSA:3.40.50.720 229 441 1.4E-71 T 11-10-2018 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 1.4E-38 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 SUPERFAMILY SSF51735 2 188 4.66E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Gene3D G3DSA:3.40.50.720 1 195 6.2E-70 T 11-10-2018 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 2 411 6.7E-138 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 SUPERFAMILY SSF48179 198 295 1.87E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 SMART SM00984 313 415 2.0E-43 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 413 1.5E-30 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 PIRSF PIRSF500134 1 433 1.1E-176 T 11-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 Gene3D G3DSA:1.20.5.100 197 228 2.1E-19 T 11-10-2018 ABE28_016035 2df9a7a534c8b2a15b7f2cd1eed6a5be 442 SUPERFAMILY SSF52413 301 426 1.7E-34 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Gene3D G3DSA:3.40.930.10 548 681 2.1E-11 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Gene3D G3DSA:1.10.10.10 3 144 3.1E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 410 470 9.8E-9 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF08279 HTH domain 6 58 1.0E-7 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Gene3D G3DSA:1.10.1790.10 304 400 4.4E-16 T 11-10-2018 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Gene3D G3DSA:1.10.1790.10 197 290 1.9E-6 T 11-10-2018 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 550 675 8.5E-10 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 SUPERFAMILY SSF63520 190 287 5.1E-8 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF00874 PRD domain 209 287 9.0E-6 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF00874 PRD domain 310 398 5.9E-18 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 SUPERFAMILY SSF63520 306 399 1.44E-18 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 SUPERFAMILY SSF52794 408 492 1.78E-11 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Pfam PF05043 Mga helix-turn-helix domain 90 165 6.9E-8 T 11-10-2018 IPR007737 Mga helix-turn-helix domain ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 SUPERFAMILY SSF55804 537 681 3.53E-13 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_018085 c98c38f472a845340731bc62aaf4ef10 696 Gene3D G3DSA:3.40.50.2300 408 495 5.1E-13 T 11-10-2018 ABE28_004465 77bc1ae37ce159bf1498540194360ce2 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 259 9.6E-57 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_004465 77bc1ae37ce159bf1498540194360ce2 261 Gene3D G3DSA:3.90.226.10 2 202 2.2E-63 T 11-10-2018 ABE28_004465 77bc1ae37ce159bf1498540194360ce2 261 SUPERFAMILY SSF52096 2 260 4.1E-76 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_004465 77bc1ae37ce159bf1498540194360ce2 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_004465 77bc1ae37ce159bf1498540194360ce2 261 Gene3D G3DSA:1.10.12.10 206 259 7.3E-16 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_001640 010c5fef8246e7034cab1d5ddffcef7e 337 Gene3D G3DSA:3.40.718.10 1 331 2.4E-122 T 11-10-2018 ABE28_001640 010c5fef8246e7034cab1d5ddffcef7e 337 SUPERFAMILY SSF53659 7 331 4.24E-98 T 11-10-2018 ABE28_001640 010c5fef8246e7034cab1d5ddffcef7e 337 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 8 328 2.4E-98 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABE28_001640 010c5fef8246e7034cab1d5ddffcef7e 337 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 35 325 6.7E-97 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 2.9E-35 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 SMART SM00663 224 503 1.9E-185 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 5.2E-67 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:1.10.150.390 1130 1188 3.9E-28 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 474 4.0E-38 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:1.10.132.30 657 794 8.3E-60 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:1.10.1790.20 950 1128 1.7E-62 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:1.10.274.100 479 656 1.8E-45 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:1.10.40.90 363 405 4.2E-23 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Gene3D G3DSA:2.40.50.100 966 1029 1.7E-62 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 SUPERFAMILY SSF64484 5 1181 0.0 T 11-10-2018 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1194 18.55 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 9.0E-91 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000550 f3b63ba5b5b088ff39a9395d4adb96c8 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 1.6E-14 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_023230 4b2ccda9dcf692155b1c8b575e74a1d4 142 SUPERFAMILY SSF52540 1 142 4.88E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023230 4b2ccda9dcf692155b1c8b575e74a1d4 142 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 44 140 2.8E-8 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABE28_023230 4b2ccda9dcf692155b1c8b575e74a1d4 142 Gene3D G3DSA:3.40.50.300 36 142 2.5E-8 T 11-10-2018 ABE28_003495 5f766bf3686edacc90892daaa4e95b86 397 SUPERFAMILY SSF103473 15 392 1.22E-67 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_003495 5f766bf3686edacc90892daaa4e95b86 397 Pfam PF07690 Major Facilitator Superfamily 24 244 4.4E-32 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_003495 5f766bf3686edacc90892daaa4e95b86 397 Gene3D G3DSA:1.20.1250.20 14 392 7.5E-61 T 11-10-2018 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.6E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.6E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.6E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.6E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.6E-41 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 Gene3D G3DSA:3.30.360.10 151 315 7.2E-150 T 11-10-2018 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 PIRSF PIRSF000149 1 335 8.0E-138 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.3E-132 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 SUPERFAMILY SSF51735 1 180 1.1E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 SMART SM00846 3 152 1.2E-83 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 Gene3D G3DSA:3.40.50.720 4 328 7.2E-150 T 11-10-2018 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 SUPERFAMILY SSF55347 152 314 8.04E-72 T 11-10-2018 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.1E-68 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016905 f3d975b68ad82d8f71a86ea63fc42d64 345 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 4.4E-37 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_001955 080c30592d6b3b8e793683c014024ee3 345 SUPERFAMILY SSF159774 51 338 1.14E-95 T 11-10-2018 IPR023158 YerB-like superfamily ABE28_001955 080c30592d6b3b8e793683c014024ee3 345 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 227 330 4.9E-24 T 11-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain ABE28_001955 080c30592d6b3b8e793683c014024ee3 345 Gene3D G3DSA:3.50.90.10 37 342 7.9E-107 T 11-10-2018 IPR023158 YerB-like superfamily ABE28_001955 080c30592d6b3b8e793683c014024ee3 345 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 53 193 1.2E-51 T 11-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal ABE28_011615 bb13d44528958371db0a2199a492b5a1 706 Pfam PF14742 N-terminal domain of (some) glycogen debranching enzymes 6 199 8.8E-57 T 11-10-2018 IPR032856 Putative glycogen debranching enzyme, N-terminal ABE28_011615 bb13d44528958371db0a2199a492b5a1 706 Gene3D G3DSA:1.50.10.10 264 636 6.1E-59 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ABE28_011615 bb13d44528958371db0a2199a492b5a1 706 Pfam PF06202 Amylo-alpha-1,6-glucosidase 269 626 8.6E-16 T 11-10-2018 IPR032790 Glycogen debranching enzyme, C-terminal KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-6798695|Reactome: R-HSA-70221 ABE28_011615 bb13d44528958371db0a2199a492b5a1 706 SUPERFAMILY SSF48208 215 681 2.21E-87 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ABE28_015190 9df2c63767fefae9d7f5cb4827d1e7bb 73 SUPERFAMILY SSF158379 1 61 1.29E-20 T 11-10-2018 IPR023164 YqgQ-like superfamily ABE28_015190 9df2c63767fefae9d7f5cb4827d1e7bb 73 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 58 1.8E-23 T 11-10-2018 IPR009256 Protein of unknown function DUF910 ABE28_015190 9df2c63767fefae9d7f5cb4827d1e7bb 73 Gene3D G3DSA:1.10.287.760 1 72 4.2E-24 T 11-10-2018 IPR023164 YqgQ-like superfamily ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 SMART SM00382 34 233 2.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 Gene3D G3DSA:3.40.50.300 3 334 5.7E-97 T 11-10-2018 ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 5.4E-23 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 Pfam PF00005 ABC transporter 26 183 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 SUPERFAMILY SSF52540 5 255 1.21E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 292 7.3E-16 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_006670 0ec21f6bde396156f4d0fddb337d1421 341 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 SUPERFAMILY SSF46548 118 243 2.62E-27 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 Pfam PF13237 4Fe-4S dicluster domain 153 227 1.1E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 15 238 5.9E-41 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 SUPERFAMILY SSF54292 8 116 4.47E-22 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 14 121 1.8E-27 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 Gene3D G3DSA:3.10.20.30 1 116 1.5E-30 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 159 170 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016660 bb9acc3c6eb5b4595751d817e70008c7 257 Gene3D G3DSA:1.10.1060.10 118 252 6.4E-29 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_015460 b85880d3d9aa7a4550e990225accbd6a 441 Pfam PF01972 Serine dehydrogenase proteinase 29 125 1.2E-9 T 11-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 ABE28_015460 b85880d3d9aa7a4550e990225accbd6a 441 Gene3D G3DSA:3.90.226.10 24 236 1.4E-49 T 11-10-2018 ABE28_015460 b85880d3d9aa7a4550e990225accbd6a 441 Pfam PF01957 NfeD-like C-terminal, partner-binding 290 436 3.4E-13 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain ABE28_015460 b85880d3d9aa7a4550e990225accbd6a 441 SUPERFAMILY SSF52096 33 198 5.84E-24 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 SMART SM00387 324 437 7.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 229 283 1.1E-14 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 SUPERFAMILY SSF103190 37 182 8.24E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 Gene3D G3DSA:3.30.565.10 285 436 1.0E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 Pfam PF14501 GHKL domain 325 434 1.4E-14 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 SUPERFAMILY SSF55890 235 321 4.45E-14 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 Gene3D G3DSA:1.10.287.130 219 281 5.0E-6 T 11-10-2018 ABE28_008715 1a97e8beba4d06e9a270bacfd6dbcc26 440 SUPERFAMILY SSF55874 298 434 1.96E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 Gene3D G3DSA:3.40.50.300 1 249 7.9E-75 T 11-10-2018 ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 SUPERFAMILY SSF52540 1 243 2.1E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 SUPERFAMILY SSF55021 252 343 2.29E-21 T 11-10-2018 ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 SMART SM00382 33 221 4.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 SMART SM00930 266 341 7.0E-24 T 11-10-2018 IPR018449 NIL domain ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 Gene3D G3DSA:3.30.70.260 250 344 7.9E-28 T 11-10-2018 ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 Pfam PF00005 ABC transporter 24 172 3.4E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_021775 8ea97e8e5a6d73f4dd9aed80c996dbcb 344 Pfam PF09383 NIL domain 268 340 9.3E-19 T 11-10-2018 IPR018449 NIL domain ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Gene3D G3DSA:2.40.340.10 338 406 5.4E-117 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Gene3D G3DSA:3.90.105.10 26 183 5.4E-117 T 11-10-2018 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 2.4E-39 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Pfam PF00994 Probable molybdopterin binding domain 191 326 5.1E-26 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Gene3D G3DSA:3.40.980.10 184 337 5.4E-117 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 6.5E-12 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 4.3E-32 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 Gene3D G3DSA:2.170.190.11 50 150 5.4E-117 T 11-10-2018 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 SUPERFAMILY SSF63882 7 183 1.28E-50 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 SUPERFAMILY SSF63867 339 413 6.15E-12 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 SMART SM00852 189 327 4.0E-40 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002705 d194ddacee257d1080d0b0601c65aed6 421 SUPERFAMILY SSF53218 187 329 4.32E-39 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 SUPERFAMILY SSF51905 1 183 8.49E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 5.7E-39 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 2.9E-8 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 2.9E-8 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 2.9E-8 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 2.9E-8 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 Gene3D G3DSA:3.50.50.100 1 354 1.4E-76 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 1.1E-6 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.1E-6 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.1E-6 T 11-10-2018 ABE28_021595 34eb2308f6ed473415ee83d44019f67c 355 SUPERFAMILY SSF51905 146 300 1.3E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008895 b48dd9c13b340ec46fd6396bcb198540 143 Pfam PF06356 Protein of unknown function (DUF1064) 1 135 7.5E-23 T 11-10-2018 IPR009414 Protein of unknown function DUF1064 ABE28_008895 b48dd9c13b340ec46fd6396bcb198540 143 SUPERFAMILY SSF57938 49 105 3.14E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABE28_006560 6f07e2521615a08c2a448a154934968f 261 SUPERFAMILY SSF56601 5 257 1.52E-45 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_006560 6f07e2521615a08c2a448a154934968f 261 Gene3D G3DSA:3.40.710.10 2 259 7.6E-65 T 11-10-2018 ABE28_006560 6f07e2521615a08c2a448a154934968f 261 Pfam PF13354 Beta-lactamase enzyme family 30 232 2.9E-57 T 11-10-2018 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 11-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 39.169 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 SUPERFAMILY SSF51569 1 250 1.51E-75 T 11-10-2018 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 Pfam PF01487 Type I 3-dehydroquinase 20 246 5.1E-66 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 Gene3D G3DSA:3.20.20.70 1 253 1.8E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_001840 db84ec7e5207f02a88c4cb87358c1e49 253 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 7.6E-71 T 11-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_005375 f8bff5c1841b382d2829c68dc315e8b3 362 Pfam PF00676 Dehydrogenase E1 component 40 330 3.3E-93 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_005375 f8bff5c1841b382d2829c68dc315e8b3 362 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 12 351 7.5E-140 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABE28_005375 f8bff5c1841b382d2829c68dc315e8b3 362 SUPERFAMILY SSF52518 9 354 8.1E-107 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005375 f8bff5c1841b382d2829c68dc315e8b3 362 Gene3D G3DSA:3.40.50.970 1 352 1.7E-122 T 11-10-2018 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 8.7E-65 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 315 1.4E-154 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 8.1E-47 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 Gene3D G3DSA:3.90.226.10 2 317 3.1E-124 T 11-10-2018 ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 SUPERFAMILY SSF52096 6 315 1.27E-100 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_017000 de5b260dfa4a097532a2ece2cb6295f4 332 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.648 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 SMART SM00448 4 114 1.8E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 Gene3D G3DSA:3.40.50.2300 1 129 1.1E-41 T 11-10-2018 ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 SMART SM00862 152 224 2.7E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 SUPERFAMILY SSF52172 4 179 1.01E-43 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 Gene3D G3DSA:1.10.10.10 130 228 6.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 224 8.7E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_013105 6e7b2f7731493f0495ddbbfc44eacb88 228 Pfam PF00072 Response regulator receiver domain 6 115 1.7E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_024140 107992aa2f3f88c05d4ad019b3f24f65 184 Pfam PF03358 NADPH-dependent FMN reductase 2 149 3.5E-34 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_024140 107992aa2f3f88c05d4ad019b3f24f65 184 SUPERFAMILY SSF52218 3 175 4.36E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_024140 107992aa2f3f88c05d4ad019b3f24f65 184 Gene3D G3DSA:3.40.50.360 1 183 7.2E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 Pfam PF03717 Penicillin-binding Protein dimerisation domain 63 297 6.9E-37 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 Gene3D G3DSA:3.40.710.10 312 671 6.7E-227 T 11-10-2018 ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 SUPERFAMILY SSF56519 55 312 7.46E-36 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 SUPERFAMILY SSF56601 313 677 6.26E-62 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 677 1.0E-66 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 Gene3D G3DSA:1.10.10.1230 88 187 6.7E-227 T 11-10-2018 ABE28_012745 f93a98ba5234dceb1d6ce66df1007230 689 Gene3D G3DSA:3.90.1310.30 63 565 6.7E-227 T 11-10-2018 ABE28_012340 189438a7819b241c72c98980bb083bc6 99 Pfam PF15580 Immunity protein 53 4 93 9.7E-34 T 11-10-2018 IPR028228 Immunity protein 53 ABE28_017790 20ecdd1ba6ffb81e188b269703311a6d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 9.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017790 20ecdd1ba6ffb81e188b269703311a6d 189 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 9.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017790 20ecdd1ba6ffb81e188b269703311a6d 189 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 59 2.7E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017790 20ecdd1ba6ffb81e188b269703311a6d 189 SUPERFAMILY SSF46689 2 65 7.48E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017790 20ecdd1ba6ffb81e188b269703311a6d 189 Gene3D G3DSA:1.10.357.10 2 186 1.6E-25 T 11-10-2018 ABE28_011425 8b23595327e36a698f9af69e07a24c0d 100 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.2E-39 T 11-10-2018 IPR014910 Putative monooxygenase YdhR ABE28_011425 8b23595327e36a698f9af69e07a24c0d 100 SUPERFAMILY SSF54909 3 96 1.5E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_011425 8b23595327e36a698f9af69e07a24c0d 100 Gene3D G3DSA:3.30.70.100 1 100 3.2E-39 T 11-10-2018 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 Gene3D G3DSA:1.10.150.240 24 101 6.1E-107 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 272 106.813 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 Pfam PF13419 Haloacid dehalogenase-like hydrolase 10 204 2.9E-12 T 11-10-2018 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 SUPERFAMILY SSF56784 6 259 7.04E-62 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 106 195 8.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 6 256 7.0E-103 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 ABE28_010390 906a98d1a3f7a59f79248b2e1314cff0 272 Gene3D G3DSA:3.40.50.1000 6 256 6.1E-107 T 11-10-2018 IPR023214 HAD superfamily ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 SMART SM00357 3 66 1.5E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.2E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 4 19 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 24 33 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 PRINTS PR00050 Cold shock protein signature 39 57 2.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 PIRSF PIRSF002599 1 66 8.3E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 SUPERFAMILY SSF50249 1 64 5.14E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_006575 f13e7291bb3bb08d215b27e866d1e4ac 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-30 T 11-10-2018 ABE28_017945 2268986fa79863e57ea3663a013c323b 407 Gene3D G3DSA:3.30.300.210 244 396 8.5E-41 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_017945 2268986fa79863e57ea3663a013c323b 407 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 392 9.1E-43 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_017945 2268986fa79863e57ea3663a013c323b 407 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 6 394 4.9E-100 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_017150 83f4593bbb440617c0d0183304bcbae7 331 SUPERFAMILY SSF53659 3 329 4.4E-102 T 11-10-2018 ABE28_017150 83f4593bbb440617c0d0183304bcbae7 331 Gene3D G3DSA:3.40.718.10 1 331 4.7E-136 T 11-10-2018 ABE28_017150 83f4593bbb440617c0d0183304bcbae7 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 324 1.8E-102 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABE28_017150 83f4593bbb440617c0d0183304bcbae7 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 328 3.9E-106 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 352 460 8.8E-31 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 333 9.3E-62 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 142 160 2.2E-37 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.2E-37 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 285 2.2E-37 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 181 199 2.2E-37 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 298 320 2.2E-37 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 SUPERFAMILY SSF55424 348 471 3.78E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 Gene3D G3DSA:3.50.50.60 157 279 2.0E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 Gene3D G3DSA:3.30.390.30 351 471 4.0E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 471 5.5E-163 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 SUPERFAMILY SSF51905 8 342 7.2E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 413 428 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 435 455 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 145 154 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 313 320 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 270 284 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 348 369 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 181 206 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 5.9E-68 T 11-10-2018 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 PIRSF PIRSF000350 2 463 1.0E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABE28_005390 2ffcfc4ea1a9efb6fedb4436abdaa11c 474 Gene3D G3DSA:3.50.50.60 11 338 2.0E-105 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 187 1.6E-79 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 Gene3D G3DSA:3.30.1130.10 55 188 6.2E-63 T 11-10-2018 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 SUPERFAMILY SSF55620 4 187 1.26E-78 T 11-10-2018 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 Gene3D G3DSA:1.10.286.10 1 54 2.3E-23 T 11-10-2018 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 42.564 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 Pfam PF01227 GTP cyclohydrolase I 9 186 6.4E-81 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABE28_014290 328243c41b94ae27ce93bafb06f1c153 188 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 Gene3D G3DSA:3.90.470.20 1 117 2.4E-36 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 117 1.3E-37 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 116 24.502 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 2 116 5.6E-29 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 117 1.0E-28 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 111 1.6E-20 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001375 641b10f0c6ca3f4bc1b5332647208354 118 SUPERFAMILY SSF56214 2 115 3.92E-33 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_022510 31abf42382f263e652736e8f2aad6025 349 ProSitePatterns PS01348 MraY family signature 2. 146 157 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_022510 31abf42382f263e652736e8f2aad6025 349 Pfam PF00953 Glycosyl transferase family 4 72 226 6.3E-45 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABE28_009070 28319197158f9313abca3b1b6ddd4e98 88 Pfam PF04531 Bacteriophage holin 2 88 9.4E-26 T 11-10-2018 IPR006485 Bacteriophage holin ABE28_009070 28319197158f9313abca3b1b6ddd4e98 88 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 2 87 4.2E-17 T 11-10-2018 IPR006485 Bacteriophage holin ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 Gene3D G3DSA:2.40.50.100 1 126 1.1E-52 T 11-10-2018 ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 125 7.2E-56 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 40.815 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 SUPERFAMILY SSF51230 4 126 1.57E-46 T 11-10-2018 IPR011053 Single hybrid motif ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABE28_021795 21c716da5eba66d4121e11e0c412f432 127 Pfam PF01597 Glycine cleavage H-protein 8 125 4.4E-50 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate ABE28_017680 ec6a6ae07394a02985bbd26367436f30 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 367 514 2.0E-25 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_017680 ec6a6ae07394a02985bbd26367436f30 533 Pfam PF01943 Polysaccharide biosynthesis protein 5 314 4.9E-42 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_017680 ec6a6ae07394a02985bbd26367436f30 533 PIRSF PIRSF038958 1 530 1.9E-115 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 SMART SM00138 12 275 2.3E-32 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 SUPERFAMILY SSF53335 78 257 2.36E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 SUPERFAMILY SSF47757 9 80 6.41E-7 T 11-10-2018 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 34 47 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 139 155 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 71 83 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 232 255 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 107 127 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 PRINTS PR00996 Glutamate methyltransferase family signature 213 227 1.7E-25 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 Pfam PF03705 CheR methyltransferase, all-alpha domain 14 61 1.5E-9 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 Pfam PF01739 CheR methyltransferase, SAM binding domain 78 258 6.1E-39 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ABE28_001255 79572aa0cf0708bb85f974357d50b905 277 Gene3D G3DSA:3.40.50.150 77 277 2.0E-57 T 11-10-2018 ABE28_015965 069907698bd90df1f6b4b908e5daee32 277 SUPERFAMILY SSF53098 114 267 2.73E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_015965 069907698bd90df1f6b4b908e5daee32 277 Pfam PF13276 HTH-like domain 36 87 4.9E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_015965 069907698bd90df1f6b4b908e5daee32 277 Pfam PF00665 Integrase core domain 117 228 1.9E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_015965 069907698bd90df1f6b4b908e5daee32 277 Gene3D G3DSA:3.30.420.10 117 259 4.7E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_024270 069907698bd90df1f6b4b908e5daee32 277 SUPERFAMILY SSF53098 114 267 2.73E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_024270 069907698bd90df1f6b4b908e5daee32 277 Pfam PF13276 HTH-like domain 36 87 4.9E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_024270 069907698bd90df1f6b4b908e5daee32 277 Pfam PF00665 Integrase core domain 117 228 1.9E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_024270 069907698bd90df1f6b4b908e5daee32 277 Gene3D G3DSA:3.30.420.10 117 259 4.7E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_010275 069907698bd90df1f6b4b908e5daee32 277 SUPERFAMILY SSF53098 114 267 2.73E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_010275 069907698bd90df1f6b4b908e5daee32 277 Pfam PF13276 HTH-like domain 36 87 4.9E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_010275 069907698bd90df1f6b4b908e5daee32 277 Pfam PF00665 Integrase core domain 117 228 1.9E-19 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_010275 069907698bd90df1f6b4b908e5daee32 277 Gene3D G3DSA:3.30.420.10 117 259 4.7E-10 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 SUPERFAMILY SSF51351 1 248 1.15E-95 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 Gene3D G3DSA:3.20.20.70 2 252 3.4E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 Pfam PF00121 Triosephosphate isomerase 5 246 2.4E-96 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 9.2E-61 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 62.739 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022135 a79e67ca17181e6a17119ac31e55a696 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 Gene3D G3DSA:1.10.10.60 2 48 3.9E-16 T 11-10-2018 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 3.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 3.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 1.0E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 SUPERFAMILY SSF48498 76 190 4.45E-15 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 Gene3D G3DSA:1.10.357.10 49 191 2.8E-21 T 11-10-2018 ABE28_005795 a2a8d9acc706be92d299c5039d844049 191 SUPERFAMILY SSF46689 4 79 7.7E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_021730 d01cdfbaed2acfdfeea0d1814d835831 142 Gene3D G3DSA:3.90.1010.10 2 142 2.2E-59 T 11-10-2018 ABE28_021730 d01cdfbaed2acfdfeea0d1814d835831 142 SUPERFAMILY SSF82649 2 142 2.72E-52 T 11-10-2018 ABE28_021730 d01cdfbaed2acfdfeea0d1814d835831 142 Pfam PF01592 NifU-like N terminal domain 10 128 5.4E-35 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 ABE28_021730 d01cdfbaed2acfdfeea0d1814d835831 142 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 140 9.8E-58 T 11-10-2018 ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 Gene3D G3DSA:3.30.70.1350 209 289 9.2E-16 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 288 1.3E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 SUPERFAMILY SSF161111 10 210 1.44E-53 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 SUPERFAMILY SSF160240 212 288 3.4E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 Gene3D G3DSA:1.20.1510.10 12 208 1.8E-54 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 Pfam PF16916 Dimerisation domain of Zinc Transporter 214 288 1.2E-16 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_009680 38f4f28665d21a4549aa7fb531a8df67 289 Pfam PF01545 Cation efflux family 17 208 4.5E-47 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_014060 31a2c57f101b74648b06ce3e8640864a 231 Pfam PF07261 Replication initiation and membrane attachment 129 200 8.0E-25 T 11-10-2018 IPR006343 DnaD domain ABE28_014060 31a2c57f101b74648b06ce3e8640864a 231 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 128 199 3.9E-25 T 11-10-2018 IPR006343 DnaD domain ABE28_014060 31a2c57f101b74648b06ce3e8640864a 231 Gene3D G3DSA:1.10.10.630 122 199 2.5E-31 T 11-10-2018 IPR034829 DnaD-like domain superfamily ABE28_014060 31a2c57f101b74648b06ce3e8640864a 231 SUPERFAMILY SSF158499 129 193 4.71E-19 T 11-10-2018 IPR034829 DnaD-like domain superfamily ABE28_014060 31a2c57f101b74648b06ce3e8640864a 231 Gene3D G3DSA:1.10.10.10 1 113 9.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 SMART SM00382 42 219 4.5E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 Gene3D G3DSA:3.40.50.300 90 224 1.0E-11 T 11-10-2018 ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 151 206 3.7E-10 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 Pfam PF13476 AAA domain 37 78 8.5E-7 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 Gene3D G3DSA:3.40.50.300 29 89 1.8E-7 T 11-10-2018 ABE28_020365 2c788b91e8fded94c7f91d744b645116 250 SUPERFAMILY SSF52540 32 213 2.51E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 PIRSF PIRSF000521 15 402 1.7E-40 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 Gene3D G3DSA:3.40.640.10 50 325 8.6E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 Pfam PF00202 Aminotransferase class-III 17 432 6.3E-112 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 SUPERFAMILY SSF53383 10 433 7.74E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 Gene3D G3DSA:3.90.1150.10 20 431 8.6E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_013285 38a87e7f5455853520fd0def3cfc3b89 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 Gene3D G3DSA:3.40.50.2300 157 286 5.0E-62 T 11-10-2018 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 Gene3D G3DSA:3.40.50.2300 63 307 5.0E-62 T 11-10-2018 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 11-10-2018 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 Gene3D G3DSA:1.10.260.40 1 61 6.3E-25 T 11-10-2018 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 7.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 7.2E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 291 3.5E-23 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 SMART SM00354 2 72 4.1E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 1.2E-21 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 SUPERFAMILY SSF47413 2 61 1.69E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_011655 be61916e9bbaa0f3bb913f35c3cbb19a 327 SUPERFAMILY SSF53822 59 310 1.35E-59 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 SUPERFAMILY SSF88946 5 104 1.39E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 174 2.1E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 Gene3D G3DSA:1.10.10.10 88 176 2.6E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 Gene3D G3DSA:1.10.1740.10 5 87 1.1E-26 T 11-10-2018 ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 SUPERFAMILY SSF88659 107 175 1.2E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 Pfam PF08281 Sigma-70, region 4 120 171 6.1E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_000985 45ad7f0fe70ecb2b57172ee093a8e08a 187 Pfam PF04542 Sigma-70 region 2 24 90 3.6E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 Gene3D G3DSA:3.40.50.300 1 234 4.5E-65 T 11-10-2018 ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 SUPERFAMILY SSF52540 3 220 5.55E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 SMART SM00382 27 204 4.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 Pfam PF13732 Domain of unknown function (DUF4162) 213 298 1.2E-8 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 ABE28_010330 a9b4465ee7dd5cf4d2165a31e1c335b6 301 Pfam PF00005 ABC transporter 19 157 1.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_020270 225d1113963211530d18dfd42b9c6a48 168 Gene3D G3DSA:1.10.10.10 1 145 3.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020270 225d1113963211530d18dfd42b9c6a48 168 SUPERFAMILY SSF46785 2 139 1.22E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020270 225d1113963211530d18dfd42b9c6a48 168 Pfam PF02082 Transcriptional regulator 2 82 1.1E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_020270 225d1113963211530d18dfd42b9c6a48 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 138 9.4E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_008940 f01ef83a51ba2eed057d110166769bc4 310 Pfam PF04233 Phage Mu protein F like protein 152 275 5.5E-14 T 11-10-2018 IPR006528 Phage head morphogenesis domain ABE28_011720 e34a0d341bbd94317c331cf022515465 541 SUPERFAMILY SSF51445 32 431 5.53E-123 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00841 Bacterial beta-amylase signature 241 258 8.5E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00841 Bacterial beta-amylase signature 129 148 8.5E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00841 Bacterial beta-amylase signature 225 240 8.5E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00841 Bacterial beta-amylase signature 410 431 8.5E-19 T 11-10-2018 IPR000125 Glycoside hydrolase, family 14A, bacterial GO:0005976|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 373 395 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 335 358 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 63 77 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 106 127 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 267 286 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 304 320 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 323 334 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 84 102 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 PRINTS PR00750 Beta-amylase (glycosyl hydrolase family 14) signature 188 210 6.9E-61 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 Gene3D G3DSA:3.20.20.80 30 448 2.2E-147 T 11-10-2018 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 SUPERFAMILY SSF49452 444 537 3.68E-17 T 11-10-2018 IPR013784 Carbohydrate-binding-like fold GO:0030246 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 Gene3D G3DSA:2.60.40.10 449 541 5.6E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_011720 e34a0d341bbd94317c331cf022515465 541 Pfam PF01373 Glycosyl hydrolase family 14 38 435 1.0E-163 T 11-10-2018 IPR001554 Glycoside hydrolase, family 14 GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 ProSitePatterns PS00679 Beta-amylase active site 2. 188 198 - T 11-10-2018 IPR018238 Glycoside hydrolase, family 14, conserved site GO:0000272|GO:0016161 KEGG: 00500+3.2.1.2|MetaCyc: PWY-6724|MetaCyc: PWY-842 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 SMART SM01065 447 539 2.8E-15 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 ABE28_011720 e34a0d341bbd94317c331cf022515465 541 Pfam PF00686 Starch binding domain 448 536 1.7E-17 T 11-10-2018 IPR002044 Carbohydrate binding module family 20 GO:2001070 ABE28_013130 134a5f313ecd0820617045175d932c25 177 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 175 28.881 T 11-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 ABE28_013130 134a5f313ecd0820617045175d932c25 177 SUPERFAMILY SSF51182 10 174 7.18E-31 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_013130 134a5f313ecd0820617045175d932c25 177 Pfam PF03079 ARD/ARD' family 4 168 1.2E-39 T 11-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 ABE28_013130 134a5f313ecd0820617045175d932c25 177 Gene3D G3DSA:2.60.120.10 1 170 3.6E-57 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 SUPERFAMILY SSF55681 7 325 4.76E-66 T 11-10-2018 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 Gene3D G3DSA:3.40.50.12590 330 394 3.7E-15 T 11-10-2018 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 Pfam PF13393 Histidyl-tRNA synthetase 12 320 7.8E-78 T 11-10-2018 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 31.857 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 PIRSF PIRSF001549 3 380 2.2E-86 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 324 4.0E-97 T 11-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 ABE28_022250 2067777d54f6a029262e9b9757561e3c 394 Gene3D G3DSA:3.30.930.10 1 325 1.2E-106 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF51569 524 835 1.7E-82 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF02785 Biotin carboxylase C-terminal domain 345 452 9.9E-31 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF89000 832 1009 3.57E-59 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 157 171 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:3.10.600.10 509 1059 9.4E-285 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF02436 Conserved carboxylase domain 827 1027 7.3E-78 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF56059 87 329 6.36E-69 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 119 325 1.6E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF00682 HMGL-like 532 804 6.0E-24 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF00289 Biotin carboxylase, N-terminal domain 5 113 4.6E-41 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF52440 4 116 1.29E-43 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:3.30.470.130 1 460 1.2E-189 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 289 296 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:3.10.600.10 463 508 1.2E-8 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:1.10.10.2790 942 977 9.4E-285 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:2.40.50.100 1067 1144 4.1E-24 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 7 1143 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:1.10.472.90 817 941 9.4E-285 T 11-10-2018 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Pfam PF00364 Biotin-requiring enzyme 1077 1143 1.1E-18 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF51246 340 458 8.37E-37 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 PIRSF PIRSF001594 1 1145 0.0 T 11-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SMART SM00878 345 452 2.2E-48 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 Gene3D G3DSA:3.20.20.70 512 816 9.4E-285 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007295 47555d563fbd5247cc02aebd1475faac 1145 SUPERFAMILY SSF51230 1068 1143 1.22E-21 T 11-10-2018 IPR011053 Single hybrid motif ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Gene3D G3DSA:2.40.30.10 195 294 1.2E-33 T 11-10-2018 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Gene3D G3DSA:3.30.70.2570 489 563 7.8E-35 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 1.1E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 SUPERFAMILY SSF54980 301 379 4.32E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Gene3D G3DSA:3.30.70.870 295 376 2.0E-36 T 11-10-2018 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 1.1E-51 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.9E-11 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Pfam PF00679 Elongation factor G C-terminus 408 495 5.3E-25 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 SUPERFAMILY SSF50447 175 297 7.9E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 184 1.9E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 SUPERFAMILY SSF52540 9 214 5.9E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Gene3D G3DSA:3.30.70.3380 377 488 8.6E-43 T 11-10-2018 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Gene3D G3DSA:3.40.50.300 9 194 3.2E-74 T 11-10-2018 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.9E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 SMART SM00838 410 495 0.0012 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 307.708 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 ABE28_015530 d7cbd3f58a8325fbb1a68178fe9769f1 611 SUPERFAMILY SSF54980 408 503 1.77E-26 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_023800 bd21ebc7d209881ca09704133523e584 118 Pfam PF00825 Ribonuclease P 1 107 4.4E-33 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABE28_023800 bd21ebc7d209881ca09704133523e584 118 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 20.05 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABE28_023800 bd21ebc7d209881ca09704133523e584 118 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 108 2.0E-36 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABE28_023800 bd21ebc7d209881ca09704133523e584 118 Gene3D G3DSA:3.30.230.10 1 117 4.5E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_023800 bd21ebc7d209881ca09704133523e584 118 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 111 2.0E-31 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 ABE28_023800 bd21ebc7d209881ca09704133523e584 118 SUPERFAMILY SSF54211 1 109 2.28E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_023800 bd21ebc7d209881ca09704133523e584 118 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 11-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 SUPERFAMILY SSF50156 138 220 1.2E-9 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 Pfam PF13180 PDZ domain 137 191 6.5E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 6 418 8.3E-171 T 11-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 Pfam PF05580 SpoIVB peptidase S55 205 413 4.7E-87 T 11-10-2018 IPR008763 Peptidase S55, SpoIVB ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 SUPERFAMILY SSF50494 350 412 8.65E-7 T 11-10-2018 IPR009003 Peptidase S1, PA clan ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 Gene3D G3DSA:2.30.42.10 136 214 4.2E-14 T 11-10-2018 ABE28_014905 71978316d0ddd02a626b0f7e11aca8a1 430 SMART SM00228 119 188 4.8E-5 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_007230 f9d618dfd50396c00a939cf0b81be651 206 SUPERFAMILY SSF142913 5 205 1.18E-82 T 11-10-2018 ABE28_007230 f9d618dfd50396c00a939cf0b81be651 206 PIRSF PIRSF021332 1 206 3.2E-86 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_007230 f9d618dfd50396c00a939cf0b81be651 206 Gene3D G3DSA:3.30.930.20 2 206 1.9E-88 T 11-10-2018 ABE28_007230 f9d618dfd50396c00a939cf0b81be651 206 Hamap MF_01851 UPF0637 protein . 5 205 39.025 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_007230 f9d618dfd50396c00a939cf0b81be651 206 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 7.9E-86 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Gene3D G3DSA:3.30.470.20 129 334 7.2E-64 T 11-10-2018 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 280 308 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 SUPERFAMILY SSF56059 139 338 3.54E-47 T 11-10-2018 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Pfam PF07478 D-ala D-ala ligase C-terminus 144 334 1.3E-45 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 PIRSF PIRSF039102 1 342 1.2E-90 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Gene3D G3DSA:3.40.50.20 1 128 1.4E-19 T 11-10-2018 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 SUPERFAMILY SSF52440 1 138 5.37E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Gene3D G3DSA:3.30.1490.20 154 215 7.2E-64 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Pfam PF01820 D-ala D-ala ligase N-terminus 2 129 6.2E-24 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 106 117 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 2 335 1.6E-77 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_024165 deaa5d91df6ec194ca18cd8210d65cbd 342 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 1 338 31.112 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_014940 4feb6f3e1d1a77dc07b615b278b9fb9f 451 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.9E-99 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 ABE28_014940 4feb6f3e1d1a77dc07b615b278b9fb9f 451 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 5 443 29.184 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014940 4feb6f3e1d1a77dc07b615b278b9fb9f 451 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 9 349 2.7E-137 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014940 4feb6f3e1d1a77dc07b615b278b9fb9f 451 Pfam PF13742 OB-fold nucleic acid binding domain 8 102 2.4E-30 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 ABE28_010710 151591f2f126aaf3ed046626fe2cdfdf 177 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABE28_010710 151591f2f126aaf3ed046626fe2cdfdf 177 Gene3D G3DSA:3.40.30.10 16 177 8.2E-47 T 11-10-2018 ABE28_010710 151591f2f126aaf3ed046626fe2cdfdf 177 SUPERFAMILY SSF52833 38 176 1.0E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_010710 151591f2f126aaf3ed046626fe2cdfdf 177 Pfam PF00578 AhpC/TSA family 41 158 4.3E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 Gene3D G3DSA:3.40.47.10 126 390 5.3E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 PIRSF PIRSF000429 1 394 2.3E-118 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 SUPERFAMILY SSF53901 4 269 2.76E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 5.1E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 Pfam PF00108 Thiolase, N-terminal domain 5 263 3.0E-95 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 SUPERFAMILY SSF53901 272 392 4.81E-37 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 Gene3D G3DSA:3.40.47.10 5 276 5.3E-143 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_023020 3b5762441c8a4da8e435756c2111c9c3 396 Pfam PF02803 Thiolase, C-terminal domain 272 391 5.4E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 Gene3D G3DSA:3.40.50.10320 38 263 3.7E-32 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 Pfam PF02585 GlcNAc-PI de-N-acetylase 50 180 3.8E-12 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 Gene3D G3DSA:3.40.50.880 605 818 2.6E-5 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 SUPERFAMILY SSF102588 50 253 1.03E-24 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 Pfam PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase 393 456 1.3E-12 T 11-10-2018 IPR018905 Alpha-galactosidase, NEW3 domain ABE28_002840 a84803d8d535e9b6de199ecdec7b4711 834 SUPERFAMILY SSF52317 628 831 9.16E-13 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 116 1.5E-11 T 11-10-2018 IPR000014 PAS domain ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 SUPERFAMILY SSF55785 12 109 4.01E-18 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 Pfam PF13426 PAS domain 13 109 6.3E-9 T 11-10-2018 IPR000014 PAS domain ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 Gene3D G3DSA:3.30.450.20 8 116 8.2E-21 T 11-10-2018 ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 Pfam PF13487 HD domain 204 274 4.4E-21 T 11-10-2018 ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 Gene3D G3DSA:1.10.3210.10 123 326 3.0E-66 T 11-10-2018 ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 SUPERFAMILY SSF109604 140 324 1.48E-31 T 11-10-2018 ABE28_004915 27d69414daafd990eaabcbac9d232e9d 328 SMART SM00471 143 293 1.8E-6 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 Pfam PF03466 LysR substrate binding domain 88 288 8.5E-42 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 Gene3D G3DSA:1.10.10.10 1 88 6.2E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 SUPERFAMILY SSF53850 88 290 6.19E-36 T 11-10-2018 ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.0E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.0E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.0E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 SUPERFAMILY SSF46785 1 87 2.94E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019525 068e8c3aefe665f0448f6e04a89f1e60 297 Gene3D G3DSA:3.40.190.290 90 293 7.2E-52 T 11-10-2018 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 SUPERFAMILY SSF56601 313 685 5.43E-59 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 Gene3D G3DSA:1.10.10.1230 86 188 1.3E-221 T 11-10-2018 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 679 8.6E-59 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 Gene3D G3DSA:3.90.1310.30 61 569 1.3E-221 T 11-10-2018 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 SUPERFAMILY SSF56519 57 312 3.01E-29 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 297 5.3E-34 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_005480 48e8cb34c5a32340a00874153b36f125 704 Gene3D G3DSA:3.40.710.10 312 664 1.3E-221 T 11-10-2018 ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 SUPERFAMILY SSF51182 239 366 1.13E-23 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 186 4.1E-21 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 SUPERFAMILY SSF51735 2 245 7.5E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 290 355 1.8E-5 T 11-10-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 Gene3D G3DSA:3.40.50.720 1 250 9.2E-90 T 11-10-2018 ABE28_016005 ca8095b75b87322c97c609dd2bf7ab60 369 Gene3D G3DSA:2.60.120.10 251 369 1.4E-32 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 43 2.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 13 27 2.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 Pfam PF00392 Bacterial regulatory proteins, gntR family 1 53 1.7E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 SUPERFAMILY SSF48008 77 181 1.26E-7 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 SUPERFAMILY SSF46785 1 57 3.95E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 Gene3D G3DSA:1.10.10.10 1 108 1.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017010 bd1142b8501ab6f1395d8f1c0f485ab5 189 SMART SM00345 1 53 1.2E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_023255 eb10ee5c2f33f44338ce46af4b3a1c8c 321 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 10 304 2.6E-79 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 ABE28_023255 eb10ee5c2f33f44338ce46af4b3a1c8c 321 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 321 93.922 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 ABE28_023255 eb10ee5c2f33f44338ce46af4b3a1c8c 321 Pfam PF03186 CobD/Cbib protein 10 296 9.7E-103 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 Gene3D G3DSA:3.90.550.10 1 269 6.2E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 SUPERFAMILY SSF53448 17 317 1.92E-35 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 Pfam PF00483 Nucleotidyl transferase 17 148 8.5E-10 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 Gene3D G3DSA:2.160.10.10 270 368 2.8E-23 T 11-10-2018 ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 SUPERFAMILY SSF51161 287 354 1.45E-10 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_012010 a5e90d0427e1eeb7a4710941bbcdd799 368 TIGRFAM TIGR02092 glgD: glucose-1-phosphate adenylyltransferase, GlgD subunit 3 367 3.2E-117 T 11-10-2018 IPR011832 Glucose-1-phosphate adenylyltransferase, GlgD subunit GO:0005978 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 Gene3D G3DSA:3.40.50.300 52 263 2.1E-33 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 6 535 8.7E-273 T 11-10-2018 IPR014251 Sporulation protease LonB ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 444 452 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 SUPERFAMILY SSF52540 55 328 1.19E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 266 1.5E-18 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 SUPERFAMILY SSF54211 350 536 1.9E-41 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 SMART SM00382 89 267 1.0E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 536 1.7E-31 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 2.3E-31 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 471 490 2.3E-31 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 494 512 2.3E-31 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 2.3E-31 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 441 460 2.3E-31 T 11-10-2018 ABE28_016490 40ae096cd700090cdf3cf4e15259c235 556 Gene3D G3DSA:3.30.230.10 345 554 4.3E-52 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 SUPERFAMILY SSF53383 9 355 4.54E-81 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 Pfam PF00155 Aminotransferase class I and II 35 355 2.0E-55 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 9 362 3.3E-106 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 Gene3D G3DSA:3.90.1150.10 25 356 2.7E-118 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 Gene3D G3DSA:3.40.640.10 48 272 2.7E-118 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_005400 9118c4cfdee56c581f7676cbff4005f7 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 7 364 57.34 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABE28_021510 bca806a51b073ba5743e9ce2cde17d44 187 PIRSF PIRSF021362 1 187 6.8E-55 T 11-10-2018 IPR009206 Nucleotidase, putative ABE28_021510 bca806a51b073ba5743e9ce2cde17d44 187 SUPERFAMILY SSF56784 1 170 9.47E-20 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_021510 bca806a51b073ba5743e9ce2cde17d44 187 Gene3D G3DSA:3.40.50.1000 1 169 2.6E-26 T 11-10-2018 IPR023214 HAD superfamily ABE28_021510 bca806a51b073ba5743e9ce2cde17d44 187 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 185 7.1E-12 T 11-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 Gene3D G3DSA:3.40.190.80 146 264 5.7E-32 T 11-10-2018 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 SUPERFAMILY SSF56655 6 258 4.19E-71 T 11-10-2018 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 Pfam PF00459 Inositol monophosphatase family 6 248 1.8E-59 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 Gene3D G3DSA:3.30.540.10 1 143 4.1E-40 T 11-10-2018 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_007240 d6a6326f699ac3cd4697dd7e3fd6756e 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 8.5E-38 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 Pfam PF01183 Glycosyl hydrolases family 25 7 177 7.1E-48 T 11-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 Gene3D G3DSA:3.10.350.10 205 252 1.0E-16 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 SMART SM00257 208 252 1.9E-13 T 11-10-2018 IPR018392 LysM domain ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 SUPERFAMILY SSF54106 207 251 3.14E-11 T 11-10-2018 ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 SUPERFAMILY SSF51445 3 196 6.81E-48 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 Pfam PF01476 LysM domain 209 251 1.0E-14 T 11-10-2018 IPR018392 LysM domain ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 Gene3D G3DSA:3.20.20.80 1 204 8.9E-65 T 11-10-2018 ABE28_009535 86bf6d3f77445fddb1c0a73033b0e720 252 SMART SM00641 4 112 1.1E-13 T 11-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 Pfam PF00491 Arginase family 4 295 6.8E-82 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PRINTS PR00116 Arginase signature 119 146 2.8E-41 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PRINTS PR00116 Arginase signature 222 251 2.8E-41 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PRINTS PR00116 Arginase signature 96 111 2.8E-41 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PRINTS PR00116 Arginase signature 257 271 2.8E-41 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PRINTS PR00116 Arginase signature 173 191 2.8E-41 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 Gene3D G3DSA:3.40.800.10 2 300 8.5E-122 T 11-10-2018 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 PIRSF PIRSF036979 1 298 8.6E-39 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 SUPERFAMILY SSF52768 4 297 2.52E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABE28_011325 c1b61d253a8bdf2a6459d932f3710999 317 TIGRFAM TIGR01229 rocF_arginase: arginase 6 300 1.7E-109 T 11-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 Pfam PF13378 Enolase C-terminal domain-like 174 404 7.0E-57 T 11-10-2018 IPR029065 Enolase C-terminal domain-like ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 SMART SM00922 171 283 1.3E-21 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 SUPERFAMILY SSF54826 1 113 2.15E-25 T 11-10-2018 ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 233 264 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 SUPERFAMILY SSF51604 96 411 4.98E-76 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_008425 f91cc40eee98c9bf7902db4384c39426 427 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 18 108 2.2E-16 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 Hamap MF_01645 Allantoinase [allB]. 2 453 52.536 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 SUPERFAMILY SSF51556 55 381 1.71E-96 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 Gene3D G3DSA:3.20.20.140 54 421 9.3E-150 T 11-10-2018 ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 Gene3D G3DSA:2.30.40.10 5 436 9.3E-150 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 SUPERFAMILY SSF51338 3 451 4.32E-30 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 TIGRFAM TIGR03178 allantoinase: allantoinase 4 452 3.9E-187 T 11-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 ABE28_005000 6c3c344401fb26e53d20a4a3ce504e74 460 Pfam PF01979 Amidohydrolase family 51 435 7.1E-35 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 261 276 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 228 239 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 PRINTS PR01041 Methionyl-tRNA synthetase signature 353 364 3.6E-34 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Pfam PF09334 tRNA synthetases class I (M) 8 365 9.2E-125 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Gene3D G3DSA:2.170.220.10 119 230 4.6E-157 T 11-10-2018 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Gene3D G3DSA:3.40.50.620 8 338 4.6E-157 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Pfam PF08264 Anticodon-binding domain of tRNA 389 528 2.0E-8 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Gene3D G3DSA:2.40.50.140 543 653 4.0E-37 T 11-10-2018 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 SUPERFAMILY SSF47323 355 566 5.98E-46 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Pfam PF01588 Putative tRNA binding domain 559 651 2.0E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 SUPERFAMILY SSF50249 552 652 1.59E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 SUPERFAMILY SSF52374 6 352 2.95E-119 T 11-10-2018 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Gene3D G3DSA:1.10.730.10 343 513 5.7E-52 T 11-10-2018 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 515 2.5E-183 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 527 653 1.9E-47 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_000165 35448fcaec0a8c1b525c65ebed9eecf9 653 Hamap MF_01228 Methionine--tRNA ligase [metG]. 2 514 52.383 T 11-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 ABE28_004755 18e26b32c29dd671653c5e3b269d8cfe 232 SUPERFAMILY SSF88713 16 232 9.64E-48 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_004755 18e26b32c29dd671653c5e3b269d8cfe 232 Pfam PF01522 Polysaccharide deacetylase 36 144 1.1E-24 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_004755 18e26b32c29dd671653c5e3b269d8cfe 232 Gene3D G3DSA:3.20.20.370 27 232 4.9E-52 T 11-10-2018 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 Gene3D G3DSA:3.30.420.140 1 141 6.0E-53 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 1.0E-53 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 Pfam PF03652 Holliday junction resolvase 1 135 2.9E-46 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 28.482 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 SMART SM00732 1 103 2.4E-40 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 ABE28_015735 31a8f6572d68c719f8b5426d9991517a 141 SUPERFAMILY SSF53098 1 137 2.58E-46 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 Gene3D G3DSA:1.10.340.30 125 249 7.1E-40 T 11-10-2018 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 53 131 1.1E-5 T 11-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 SUPERFAMILY SSF48150 119 301 1.69E-42 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 SMART SM00478 137 302 2.8E-25 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 135 282 3.7E-13 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 Gene3D G3DSA:1.10.1670.40 105 299 7.1E-40 T 11-10-2018 ABE28_018115 6fc7bacb7140d905b2343d1b714f7e10 302 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 233 257 - T 11-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 Gene3D G3DSA:3.40.50.12240 11 437 1.2E-148 T 11-10-2018 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 355 9.5E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 SUPERFAMILY SSF52540 93 361 6.52E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 435 1.0E-192 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 346 355 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 SMART SM00382 158 339 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 89 3.9E-8 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_007960 35af32e83fe242444b13c407f2a7ba95 441 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 434 3.8E-202 T 11-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 6.6E-13 T 11-10-2018 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 6.6E-13 T 11-10-2018 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 6.6E-13 T 11-10-2018 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 242 258 6.6E-13 T 11-10-2018 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 212 228 1.4E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.4E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 1.4E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 1.4E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.4E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 SUPERFAMILY SSF51905 5 265 2.88E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 Gene3D G3DSA:3.50.50.60 6 294 2.9E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 290 1.7E-105 T 11-10-2018 ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 5 318 1.3E-140 T 11-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA ABE28_014400 4f3e560e68fec0c0b8b646440ed70f8d 325 Gene3D G3DSA:3.50.50.60 132 249 2.9E-54 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 SUPERFAMILY SSF55620 162 311 2.59E-43 T 11-10-2018 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 PRINTS PR00093 Uricase signature 103 116 1.8E-13 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 PRINTS PR00093 Uricase signature 67 81 1.8E-13 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 PRINTS PR00093 Uricase signature 190 202 1.8E-13 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 PRINTS PR00093 Uricase signature 174 190 1.8E-13 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 TIGRFAM TIGR03383 urate_oxi: urate oxidase 7 309 1.0E-79 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 Gene3D G3DSA:3.10.270.10 6 326 1.4E-113 T 11-10-2018 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 Pfam PF01014 Uricase 168 302 4.6E-21 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 Pfam PF01014 Uricase 11 139 2.4E-13 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 PIRSF PIRSF000241 1 318 1.9E-78 T 11-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 ABE28_003430 9b5c4256e1a13bdf19974b446448c77f 327 SUPERFAMILY SSF55620 10 151 1.36E-34 T 11-10-2018 ABE28_014160 cfdfdbb7e3e3c766a5cea97c4fd95b84 237 Gene3D G3DSA:3.40.50.10320 5 237 6.2E-86 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_014160 cfdfdbb7e3e3c766a5cea97c4fd95b84 237 Pfam PF02585 GlcNAc-PI de-N-acetylase 10 125 5.2E-23 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ABE28_014160 cfdfdbb7e3e3c766a5cea97c4fd95b84 237 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 7 228 1.7E-93 T 11-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 ABE28_014160 cfdfdbb7e3e3c766a5cea97c4fd95b84 237 SUPERFAMILY SSF102588 7 228 6.02E-56 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_005385 71444c234494d8f79fcfe95728023673 426 Gene3D G3DSA:4.10.320.10 112 158 2.7E-15 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_005385 71444c234494d8f79fcfe95728023673 426 SUPERFAMILY SSF47005 115 157 9.94E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_005385 71444c234494d8f79fcfe95728023673 426 Gene3D G3DSA:3.30.559.10 180 423 6.7E-87 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_005385 71444c234494d8f79fcfe95728023673 426 Pfam PF00364 Biotin-requiring enzyme 3 75 2.0E-24 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_005385 71444c234494d8f79fcfe95728023673 426 Pfam PF02817 e3 binding domain 119 152 1.1E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABE28_005385 71444c234494d8f79fcfe95728023673 426 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 422 6.4E-86 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABE28_005385 71444c234494d8f79fcfe95728023673 426 SUPERFAMILY SSF52777 187 422 1.07E-82 T 11-10-2018 ABE28_005385 71444c234494d8f79fcfe95728023673 426 Gene3D G3DSA:2.40.50.100 1 97 1.1E-26 T 11-10-2018 ABE28_005385 71444c234494d8f79fcfe95728023673 426 SUPERFAMILY SSF51230 1 80 7.72E-27 T 11-10-2018 IPR011053 Single hybrid motif ABE28_005385 71444c234494d8f79fcfe95728023673 426 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 Pfam PF00072 Response regulator receiver domain 4 113 9.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 Gene3D G3DSA:3.40.50.2300 1 122 3.6E-25 T 11-10-2018 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 222 4.4E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 Gene3D G3DSA:1.10.10.10 129 226 2.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 SUPERFAMILY SSF46894 128 223 5.39E-28 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 SMART SM00862 148 223 3.3E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 SUPERFAMILY SSF52172 3 118 3.56E-25 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_011160 a7ee5bde6bd1efcb5026c109609e4bed 226 SMART SM00448 2 112 1.5E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012525 c23b695e6a57400d730e9b3bfbb0cfc8 305 Pfam PF00892 EamA-like transporter family 151 286 1.1E-24 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_012525 c23b695e6a57400d730e9b3bfbb0cfc8 305 Pfam PF00892 EamA-like transporter family 7 138 5.7E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_012525 c23b695e6a57400d730e9b3bfbb0cfc8 305 SUPERFAMILY SSF103481 47 141 1.83E-11 T 11-10-2018 ABE28_012525 c23b695e6a57400d730e9b3bfbb0cfc8 305 SUPERFAMILY SSF103481 184 286 3.27E-13 T 11-10-2018 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 Pfam PF00664 ABC transporter transmembrane region 28 295 9.6E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 SUPERFAMILY SSF52540 329 574 2.61E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000940 2422ac28bc10f142de975e2e06474508 581 Gene3D G3DSA:1.20.1560.10 1 327 3.3E-82 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 SMART SM00382 363 550 1.8E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000940 2422ac28bc10f142de975e2e06474508 581 Pfam PF00005 ABC transporter 354 504 5.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 SUPERFAMILY SSF90123 15 322 1.44E-73 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_000940 2422ac28bc10f142de975e2e06474508 581 Gene3D G3DSA:3.40.50.300 328 579 6.4E-89 T 11-10-2018 ABE28_012165 5c8f2f43084731e0b8b5cd0c3efd48ac 403 Gene3D G3DSA:3.40.50.1970 5 200 4.1E-46 T 11-10-2018 ABE28_012165 5c8f2f43084731e0b8b5cd0c3efd48ac 403 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 189 217 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABE28_012165 5c8f2f43084731e0b8b5cd0c3efd48ac 403 SUPERFAMILY SSF56796 8 386 1.24E-94 T 11-10-2018 ABE28_012165 5c8f2f43084731e0b8b5cd0c3efd48ac 403 Pfam PF00465 Iron-containing alcohol dehydrogenase 14 386 1.8E-92 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABE28_012165 5c8f2f43084731e0b8b5cd0c3efd48ac 403 Gene3D G3DSA:1.20.1090.10 201 396 2.9E-49 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:3.40.50.300 490 712 7.3E-89 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 707 1.5E-56 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 5.4E-27 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SUPERFAMILY SSF81923 5 145 6.28E-32 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.6E-13 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.6E-16 T 11-10-2018 IPR004176 Clp, N-terminal ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 93 143 4.5E-18 T 11-10-2018 IPR004176 Clp, N-terminal ABE28_000440 b96d76b1a78671770e684869c98cb676 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 6.2E-43 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SUPERFAMILY SSF52540 486 799 2.23E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:1.10.1780.10 1 150 2.9E-62 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:4.10.860.10 409 467 3.4E-53 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SUPERFAMILY SSF52540 160 468 4.45E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:1.10.8.60 714 807 1.4E-28 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SMART SM00382 200 345 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SMART SM00382 537 677 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:3.40.50.300 151 343 4.7E-72 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Gene3D G3DSA:1.10.8.60 346 481 3.4E-53 T 11-10-2018 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 SMART SM01086 714 803 4.5E-39 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_000440 b96d76b1a78671770e684869c98cb676 813 Pfam PF02151 UvrB/uvrC motif 419 452 2.6E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 ABE28_000440 b96d76b1a78671770e684869c98cb676 813 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 279 2.5E-73 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 Gene3D G3DSA:3.40.50.150 2 216 4.6E-73 T 11-10-2018 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 SUPERFAMILY SSF53335 16 288 2.41E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 55.633 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 1.4E-83 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 Gene3D G3DSA:1.10.8.100 220 289 2.4E-18 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 ABE28_000185 b56592f33c3ab3ff9474fb77b8acdbef 292 SMART SM00650 36 212 6.1E-84 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 Gene3D G3DSA:3.20.20.70 1 305 4.4E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 PIRSF PIRSF000164 1 303 2.1E-87 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 SUPERFAMILY SSF51395 1 301 7.33E-90 T 11-10-2018 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 41.294 T 11-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 302 1.5E-121 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 ABE28_007640 3851af2e169f4d23059f4156a982382a 313 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 1.7E-92 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 512 2.7E-101 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 PRINTS PR01005 Flagellar hook-associated protein signature 433 454 2.6E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 PRINTS PR01005 Flagellar hook-associated protein signature 480 504 2.6E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 PRINTS PR01005 Flagellar hook-associated protein signature 14 37 2.6E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 461 512 3.5E-15 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 SUPERFAMILY SSF64518 148 512 7.19E-17 T 11-10-2018 ABE28_022455 d83ed45b66556db1309b87a95b32c357 519 Pfam PF00460 Flagella basal body rod protein 8 37 5.1E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 Gene3D G3DSA:1.20.1560.10 2 319 2.6E-81 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 Pfam PF00664 ABC transporter transmembrane region 22 292 1.9E-44 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 Gene3D G3DSA:3.40.50.300 331 581 6.8E-82 T 11-10-2018 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 SMART SM00382 363 555 1.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 SUPERFAMILY SSF52540 332 574 9.53E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 SUPERFAMILY SSF90123 6 319 2.88E-76 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 Pfam PF00005 ABC transporter 354 501 1.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_005495 d6fc982f8eb9b94d0ff6c00f3c7791f2 583 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 91 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 2.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 Pfam PF00717 Peptidase S24-like 36 103 2.7E-18 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 Gene3D G3DSA:2.10.109.10 59 186 1.8E-47 T 11-10-2018 ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 SUPERFAMILY SSF51306 27 183 6.54E-53 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_005860 7d12d8663e37a9b68708ceb2243bdbcb 187 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 177 2.5E-54 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_022760 06da31742f499dde3c833d526d6db469 249 Pfam PF08680 TATA-box binding 50 249 5.0E-45 T 11-10-2018 IPR014794 TATA-box binding ABE28_022760 06da31742f499dde3c833d526d6db469 249 Gene3D G3DSA:3.30.2030.10 34 175 1.5E-38 T 11-10-2018 ABE28_022760 06da31742f499dde3c833d526d6db469 249 Gene3D G3DSA:3.30.360.40 176 249 1.8E-23 T 11-10-2018 ABE28_022760 06da31742f499dde3c833d526d6db469 249 SUPERFAMILY SSF143842 44 246 6.54E-43 T 11-10-2018 IPR036209 YwmB-like superfamily ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 42 72 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 Pfam PF08281 Sigma-70, region 4 118 168 2.1E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 173 7.7E-29 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 Gene3D G3DSA:1.10.1740.10 1 109 2.7E-30 T 11-10-2018 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 SUPERFAMILY SSF88659 107 175 1.35E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 SUPERFAMILY SSF88946 4 101 9.42E-27 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 Pfam PF04542 Sigma-70 region 2 20 86 7.5E-19 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_002000 513c3b9c8c5f9d589214da2ffb76a475 180 Gene3D G3DSA:1.10.10.10 111 176 2.1E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Gene3D G3DSA:3.40.120.10 33 191 2.5E-45 T 11-10-2018 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 SUPERFAMILY SSF55957 447 570 1.44E-13 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Gene3D G3DSA:3.30.310.50 469 567 8.8E-9 T 11-10-2018 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Gene3D G3DSA:3.40.120.10 209 324 4.6E-22 T 11-10-2018 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 SUPERFAMILY SSF53738 221 315 2.12E-19 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 SUPERFAMILY SSF53738 304 454 2.75E-32 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 502 550 2.1E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 445 9.4E-23 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 SUPERFAMILY SSF53738 31 219 2.67E-43 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 211 315 9.4E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 181 2.2E-38 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_004855 31672dcc556029b9c4e70d5366488556 576 Gene3D G3DSA:3.40.120.10 325 452 7.3E-37 T 11-10-2018 ABE28_008380 5df0576f15d674ad1e0fbe54b3446ba8 179 Pfam PF10628 Outer spore coat protein E (CotE) 3 174 5.4E-69 T 11-10-2018 IPR018901 Spore coat protein CotE ABE28_006480 d1a7879c500b0f73be419774643de466 238 Gene3D G3DSA:3.40.50.1000 14 205 1.1E-64 T 11-10-2018 IPR023214 HAD superfamily ABE28_006480 d1a7879c500b0f73be419774643de466 238 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 12 200 6.8E-79 T 11-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 ABE28_006480 d1a7879c500b0f73be419774643de466 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 199 5.5E-22 T 11-10-2018 ABE28_006480 d1a7879c500b0f73be419774643de466 238 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 12 199 7.5E-60 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase ABE28_006480 d1a7879c500b0f73be419774643de466 238 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 78 199 2.2E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_006480 d1a7879c500b0f73be419774643de466 238 Gene3D G3DSA:1.10.150.240 25 103 1.1E-64 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_006480 d1a7879c500b0f73be419774643de466 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 82 173 3.2E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_006480 d1a7879c500b0f73be419774643de466 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 12 23 7.1E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_006480 d1a7879c500b0f73be419774643de466 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 161 181 7.1E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_006480 d1a7879c500b0f73be419774643de466 238 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 159 7.1E-8 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_006480 d1a7879c500b0f73be419774643de466 238 SUPERFAMILY SSF56784 12 204 4.64E-42 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_006910 08853a18924656a7f3ba603c19dc60b4 243 Pfam PF02535 ZIP Zinc transporter 102 238 8.3E-14 T 11-10-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABE28_016435 76a375abc2193c569a8a476644a70084 356 Gene3D G3DSA:3.90.1200.10 102 349 8.9E-20 T 11-10-2018 ABE28_016435 76a375abc2193c569a8a476644a70084 356 SUPERFAMILY SSF56112 34 302 4.08E-15 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_016435 76a375abc2193c569a8a476644a70084 356 Gene3D G3DSA:3.30.200.20 2 100 3.1E-14 T 11-10-2018 ABE28_016435 76a375abc2193c569a8a476644a70084 356 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 17 321 5.8E-111 T 11-10-2018 IPR014253 Spore coat protein YsxE ABE28_013700 0f89726a033728422af7af7a35e6d233 294 SUPERFAMILY SSF53697 4 248 4.23E-70 T 11-10-2018 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 294 42.72 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 Gene3D G3DSA:3.40.50.10490 1 217 1.1E-74 T 11-10-2018 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 184 201 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 Gene3D G3DSA:1.10.8.1080 218 294 2.2E-29 T 11-10-2018 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 5 294 1.2E-122 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ABE28_013700 0f89726a033728422af7af7a35e6d233 294 Pfam PF01380 SIS domain 128 208 9.5E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_018565 07de85063e64464a1e0e62fe535fbbf2 72 Pfam PF11148 Protein of unknown function (DUF2922) 3 69 2.0E-21 T 11-10-2018 IPR021321 Protein of unknown function DUF2922 ABE28_019120 8b4498b4b1fa4a8f4defce95ba490e87 234 SUPERFAMILY SSF51182 13 227 2.47E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_019120 8b4498b4b1fa4a8f4defce95ba490e87 234 Pfam PF07883 Cupin domain 44 109 2.8E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_019120 8b4498b4b1fa4a8f4defce95ba490e87 234 Pfam PF07883 Cupin domain 154 212 1.1E-8 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_019120 8b4498b4b1fa4a8f4defce95ba490e87 234 Gene3D G3DSA:2.60.120.10 18 127 9.3E-93 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_019120 8b4498b4b1fa4a8f4defce95ba490e87 234 Gene3D G3DSA:2.60.120.10 14 228 9.3E-93 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_014710 80a52eba8093fb938fa73487a345f071 219 SUPERFAMILY SSF54001 95 217 7.52E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_014710 80a52eba8093fb938fa73487a345f071 219 Pfam PF00877 NlpC/P60 family 112 216 1.4E-31 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_014710 80a52eba8093fb938fa73487a345f071 219 SUPERFAMILY SSF47090 27 96 2.01E-20 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_014710 80a52eba8093fb938fa73487a345f071 219 Gene3D G3DSA:1.10.101.10 26 96 3.5E-19 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_014710 80a52eba8093fb938fa73487a345f071 219 Pfam PF01471 Putative peptidoglycan binding domain 36 93 2.9E-15 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_014710 80a52eba8093fb938fa73487a345f071 219 Gene3D G3DSA:3.90.1720.10 97 219 6.9E-41 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 350 1.5E-136 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 132 2.0E-49 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 Pfam PF00117 Glutamine amidotransferase class-I 171 347 9.0E-45 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 324 337 1.2E-9 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 238 249 1.2E-9 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 211 220 1.2E-9 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 SUPERFAMILY SSF52317 153 352 1.89E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 208 222 1.5E-31 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 169 183 1.5E-31 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 255 272 1.5E-31 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 238 254 1.5E-31 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 280 291 1.5E-31 T 11-10-2018 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 Gene3D G3DSA:3.40.50.880 157 358 2.7E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 SUPERFAMILY SSF52021 2 136 4.32E-49 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 353 44.33 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 Gene3D G3DSA:3.50.30.20 1 144 2.9E-53 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006040 a56385866c66fb5c380c16ddf7a38a29 360 SMART SM01097 1 133 1.2E-69 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_004060 f9ee2a363e51b7201f01767f90f19a4e 142 Pfam PF07681 DoxX 8 86 6.8E-21 T 11-10-2018 IPR032808 DoxX family ABE28_014935 cd6469241010099cffb4d55173735270 77 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 8 47 6.0E-11 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014935 cd6469241010099cffb4d55173735270 77 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 8 63 1.2E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014935 cd6469241010099cffb4d55173735270 77 SUPERFAMILY SSF116842 3 70 1.83E-20 T 11-10-2018 ABE28_014935 cd6469241010099cffb4d55173735270 77 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 15.14 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014935 cd6469241010099cffb4d55173735270 77 Gene3D G3DSA:1.10.287.1040 2 77 1.8E-21 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 ABE28_014935 cd6469241010099cffb4d55173735270 77 Pfam PF02609 Exonuclease VII small subunit 9 59 1.3E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABE28_014935 cd6469241010099cffb4d55173735270 77 PIRSF PIRSF006488 1 77 8.4E-20 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Gene3D G3DSA:2.40.110.10 121 234 4.4E-41 T 11-10-2018 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 372 2.5E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Gene3D G3DSA:1.10.540.10 1 120 1.3E-39 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 SUPERFAMILY SSF56645 1 242 9.82E-84 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 4.7E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 SUPERFAMILY SSF47203 227 381 6.28E-50 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 PIRSF PIRSF016578 126 379 3.7E-10 T 11-10-2018 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 PIRSF PIRSF016578 5 97 0.003 T 11-10-2018 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 117 3.5E-36 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_006370 6d35e4c31a2045713fa2050591134944 401 Gene3D G3DSA:1.20.140.10 235 382 9.1E-47 T 11-10-2018 ABE28_014335 43a841f545350d363f419fa21111f555 436 SUPERFAMILY SSF52540 5 167 1.26E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014335 43a841f545350d363f419fa21111f555 436 Gene3D G3DSA:3.30.300.20 353 436 3.8E-36 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_014335 43a841f545350d363f419fa21111f555 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 430 3.6E-178 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 SUPERFAMILY SSF52540 138 435 3.09E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014335 43a841f545350d363f419fa21111f555 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 4.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 Pfam PF01926 50S ribosome-binding GTPase 179 295 3.0E-26 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 248 266 2.5E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 178 198 2.5E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 PIRSF PIRSF006485 2 436 2.1E-172 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 129 2.5E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 176 340 1.1E-26 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.114 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 ABE28_014335 43a841f545350d363f419fa21111f555 436 Gene3D G3DSA:3.40.50.300 171 352 1.4E-53 T 11-10-2018 ABE28_014335 43a841f545350d363f419fa21111f555 436 Gene3D G3DSA:3.40.50.300 1 163 2.2E-46 T 11-10-2018 ABE28_014335 43a841f545350d363f419fa21111f555 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 431 8.1E-35 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like ABE28_021410 22b8fbf305341804d7e91d3dd11d939a 251 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 116 4.8E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ABE28_021410 22b8fbf305341804d7e91d3dd11d939a 251 SUPERFAMILY SSF57716 90 124 2.42E-6 T 11-10-2018 ABE28_021410 22b8fbf305341804d7e91d3dd11d939a 251 Gene3D G3DSA:1.20.120.910 1 128 6.8E-31 T 11-10-2018 ABE28_021410 22b8fbf305341804d7e91d3dd11d939a 251 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 164 4.1E-59 T 11-10-2018 IPR014240 Regulatory protein, YteA family ABE28_021410 22b8fbf305341804d7e91d3dd11d939a 251 SUPERFAMILY SSF109635 2 89 3.4E-15 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Gene3D G3DSA:2.40.110.10 147 251 3.2E-34 T 11-10-2018 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Gene3D G3DSA:1.10.540.10 2 146 1.0E-43 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 SUPERFAMILY SSF47203 258 423 4.67E-44 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 SUPERFAMILY SSF56645 23 264 2.88E-70 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 379 398 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 32 144 2.5E-27 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 148 241 5.0E-22 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 253 416 2.5E-34 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Gene3D G3DSA:1.20.140.10 424 595 1.6E-52 T 11-10-2018 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 150 162 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_021805 e27bc8848fe0e9d919fc7d99c2615571 595 Gene3D G3DSA:1.20.140.10 253 423 9.3E-51 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 33 56 5.2E-16 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 212 237 5.2E-16 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00942 Copper-transporting ATPase 1 signature 7 32 5.2E-16 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Pfam PF00403 Heavy-metal-associated domain 11 70 1.2E-14 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Pfam PF00403 Heavy-metal-associated domain 78 137 2.0E-16 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 SUPERFAMILY SSF81653 300 396 2.88E-31 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 500 506 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Gene3D G3DSA:3.40.1110.10 509 629 2.1E-94 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 269 781 9.8E-95 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 229 799 2.5E-199 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 SUPERFAMILY SSF55008 75 143 1.31E-21 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 SUPERFAMILY SSF56784 496 797 2.69E-61 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 9 72 9.9E-16 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 75 138 1.2E-11 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Gene3D G3DSA:2.70.150.20 289 401 2.8E-44 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 SUPERFAMILY SSF81665 244 779 1.57E-13 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 12 41 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 ProSitePatterns PS01047 Heavy-metal-associated domain. 80 109 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 119 139 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 481 496 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 286 304 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 90 104 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 419 433 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 674 691 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 266 285 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00943 Copper-transporting ATPase signature 214 233 3.1E-18 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 498 512 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 720 732 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 622 633 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 644 654 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 697 716 5.0E-27 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Gene3D G3DSA:3.30.70.100 74 148 3.2E-23 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Gene3D G3DSA:3.40.50.1000 479 749 2.1E-94 T 11-10-2018 IPR023214 HAD superfamily ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Pfam PF00122 E1-E2 ATPase 297 477 4.7E-60 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 210 800 2.4E-185 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Pfam PF00702 haloacid dehalogenase-like hydrolase 494 711 2.0E-45 T 11-10-2018 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 SUPERFAMILY SSF55008 2 72 3.4E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_010315 9361e3d47ad7e2b85e0bd22385a90b87 804 Gene3D G3DSA:3.30.70.100 2 73 1.2E-20 T 11-10-2018 ABE28_017255 786492aad6ba383434af6a79abe931b9 159 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site ABE28_017255 786492aad6ba383434af6a79abe931b9 159 SUPERFAMILY SSF55781 14 159 1.4E-46 T 11-10-2018 ABE28_017255 786492aad6ba383434af6a79abe931b9 159 SMART SM00065 31 159 4.5E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_017255 786492aad6ba383434af6a79abe931b9 159 Pfam PF13185 GAF domain 48 157 3.7E-12 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_017255 786492aad6ba383434af6a79abe931b9 159 Gene3D G3DSA:3.30.450.40 10 159 4.3E-66 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 Gene3D G3DSA:2.60.40.10 51 151 2.6E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 Gene3D G3DSA:3.20.20.80 155 580 7.4E-179 T 11-10-2018 ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 58 135 1.1E-11 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 SMART SM00642 146 571 7.0E-8 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 Gene3D G3DSA:2.60.40.1180 581 665 1.1E-16 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 SUPERFAMILY SSF51011 590 664 4.24E-5 T 11-10-2018 ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 TIGRFAM TIGR02104 pulA_typeI: pullulanase, type I 49 641 2.1E-261 T 11-10-2018 IPR011840 Pullulanase, type I ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 Pfam PF00128 Alpha amylase, catalytic domain 208 301 3.7E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 SUPERFAMILY SSF51445 153 578 1.86E-126 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_011865 5593256e2d9e8dd19ae2597b0048a6f9 667 SUPERFAMILY SSF81296 53 156 4.48E-18 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 Pfam PF00813 FliP family 25 217 4.8E-82 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 9.2E-67 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 3.7E-23 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 4.8E-91 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 ABE28_008025 2a590b946c64e4955bb33cafbba90d02 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 ABE28_021040 e5ab568cad430c2faa02660c2b867e2c 367 Gene3D G3DSA:3.20.20.210 5 367 3.4E-120 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABE28_021040 e5ab568cad430c2faa02660c2b867e2c 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 363 1.4E-16 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 ABE28_021040 e5ab568cad430c2faa02660c2b867e2c 367 SUPERFAMILY SSF51726 12 367 2.09E-81 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 Gene3D G3DSA:3.40.630.30 8 225 1.8E-61 T 11-10-2018 ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 Gene3D G3DSA:3.60.110.10 226 513 4.9E-56 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 SUPERFAMILY SSF55729 13 143 2.74E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 Pfam PF00795 Carbon-nitrogen hydrolase 244 460 5.8E-27 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 Pfam PF00583 Acetyltransferase (GNAT) family 24 143 3.5E-11 T 11-10-2018 IPR000182 GNAT domain ABE28_004850 06a9e364c608de7c7c4a3bdc95b78346 515 SUPERFAMILY SSF56317 224 494 9.16E-57 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_018180 3466af88b55de471cc6b7d8d06002b3a 169 SUPERFAMILY SSF55729 3 151 3.12E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_018180 3466af88b55de471cc6b7d8d06002b3a 169 Gene3D G3DSA:3.40.630.30 1 165 5.8E-26 T 11-10-2018 ABE28_018180 3466af88b55de471cc6b7d8d06002b3a 169 Pfam PF13302 Acetyltransferase (GNAT) domain 4 144 4.4E-17 T 11-10-2018 IPR000182 GNAT domain ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 2.7E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Hamap MF_00942 Endonuclease III [nth]. 1 211 37.94 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 SUPERFAMILY SSF48150 1 210 7.22E-72 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 SMART SM00525 188 208 2.2E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 SMART SM00478 39 187 3.9E-64 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Gene3D G3DSA:1.10.340.30 22 133 5.4E-80 T 11-10-2018 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Pfam PF00633 Helix-hairpin-helix motif 101 128 1.7E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 PIRSF PIRSF001435 2 214 7.5E-55 T 11-10-2018 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 4.1E-23 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 Gene3D G3DSA:1.10.1670.10 16 205 5.4E-80 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABE28_014055 ea339826fc322de4dff0f93b764997a3 218 TIGRFAM TIGR01083 nth: endonuclease III 6 196 3.7E-84 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 ABE28_011825 f28e0ebaf602197a2bb6df96b7828672 150 Gene3D G3DSA:3.10.180.10 1 150 1.5E-61 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011825 f28e0ebaf602197a2bb6df96b7828672 150 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 132 1.7E-7 T 11-10-2018 ABE28_011825 f28e0ebaf602197a2bb6df96b7828672 150 SUPERFAMILY SSF54593 1 145 3.18E-33 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 SMART SM01232 134 226 6.5E-49 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.369 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 SUPERFAMILY SSF81624 2 139 4.32E-43 T 11-10-2018 IPR035937 MutM-like, N-terminal ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 SUPERFAMILY SSF46946 133 223 8.51E-30 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 9.7E-113 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Gene3D G3DSA:1.10.8.50 136 274 1.1E-47 T 11-10-2018 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Gene3D G3DSA:3.20.190.10 2 130 1.1E-43 T 11-10-2018 IPR035937 MutM-like, N-terminal ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 SMART SM00898 2 118 8.0E-54 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 SUPERFAMILY SSF57716 222 274 5.7E-17 T 11-10-2018 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 2.7E-36 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Pfam PF06827 Zinc finger found in FPG and IleRS 246 274 3.1E-10 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ABE28_016920 cc3f417625f70625f0f8ffae12873519 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 3.0E-32 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 235 324 2.9E-14 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 SMART SM00876 235 325 2.4E-32 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 TIGRFAM TIGR00433 bioB: biotin synthase 31 324 2.8E-118 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 Hamap MF_01694 Biotin synthase [bioB]. 19 326 39.475 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 PIRSF PIRSF001619 2 330 4.8E-126 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 Gene3D G3DSA:3.20.20.70 20 328 2.2E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 SMART SM00729 59 267 5.7E-34 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 Pfam PF04055 Radical SAM superfamily 68 220 5.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_020415 8a03c59ca6574ff1da12ffeb2aa8f06a 330 SUPERFAMILY SSF102114 19 326 1.69E-70 T 11-10-2018 ABE28_021945 1bc121e93dc60c9b9a3baffe290a64b9 315 Gene3D G3DSA:1.10.3470.10 4 314 5.6E-60 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021945 1bc121e93dc60c9b9a3baffe290a64b9 315 Pfam PF01032 FecCD transport family 34 310 6.8E-55 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_021945 1bc121e93dc60c9b9a3baffe290a64b9 315 SUPERFAMILY SSF81345 9 310 1.83E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_019460 773aa0df61d7ab113905384aa994537b 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 242 307 3.8E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_019460 773aa0df61d7ab113905384aa994537b 329 SUPERFAMILY SSF52540 13 262 5.81E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019460 773aa0df61d7ab113905384aa994537b 329 Pfam PF00005 ABC transporter 40 190 7.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_019460 773aa0df61d7ab113905384aa994537b 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 326 4.3E-31 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_019460 773aa0df61d7ab113905384aa994537b 329 Gene3D G3DSA:3.40.50.300 10 329 1.4E-103 T 11-10-2018 ABE28_019460 773aa0df61d7ab113905384aa994537b 329 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_019460 773aa0df61d7ab113905384aa994537b 329 SMART SM00382 48 240 5.4E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 SUPERFAMILY SSF51998 208 731 5.19E-162 T 11-10-2018 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 Pfam PF02867 Ribonucleotide reductase, barrel domain 209 726 2.9E-139 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 284 303 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 483 506 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 521 543 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 549 572 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 PRINTS PR01183 Ribonucleotide reductase large chain signature 431 442 1.4E-38 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 SUPERFAMILY SSF48168 25 207 1.18E-46 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 132 729 2.2E-168 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 128 206 3.8E-19 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005220 d8f9c8c5a35b330b63e99b11edd9cc4b 743 Gene3D G3DSA:3.20.70.20 74 737 1.4E-197 T 11-10-2018 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PRINTS PR00069 Aldo-keto reductase signature 40 64 3.5E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PRINTS PR00069 Aldo-keto reductase signature 100 118 3.5E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PRINTS PR00069 Aldo-keto reductase signature 130 147 3.5E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PRINTS PR00069 Aldo-keto reductase signature 164 193 3.5E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PRINTS PR00069 Aldo-keto reductase signature 201 225 3.5E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 SUPERFAMILY SSF51430 7 275 7.07E-95 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 234 249 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PIRSF PIRSF000097 120 277 4.2E-54 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 PIRSF PIRSF000097 2 125 1.5E-41 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 Gene3D G3DSA:3.20.20.100 1 280 5.9E-127 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 130 147 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_017740 f33bee3b1857d4d50db1e63e9111533d 280 Pfam PF00248 Aldo/keto reductase family 31 266 8.3E-51 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 406 3.9E-193 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 PIRSF PIRSF005572 20 408 4.7E-55 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 SUPERFAMILY SSF53383 4 400 1.75E-133 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 Gene3D G3DSA:3.40.640.10 34 294 1.6E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 Gene3D G3DSA:3.90.1150.10 6 397 1.6E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_021735 f4fae4887353a5d5f9b4a2b247ce18bb 409 Pfam PF00266 Aminotransferase class-V 23 394 3.2E-166 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_014080 1320b579d897beff52cf4cc26e28c4de 127 Gene3D G3DSA:3.30.429.10 1 127 6.6E-47 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily ABE28_014080 1320b579d897beff52cf4cc26e28c4de 127 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 126 3.6E-41 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 ABE28_014080 1320b579d897beff52cf4cc26e28c4de 127 SUPERFAMILY SSF55331 2 127 6.41E-38 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily ABE28_000390 fabe1578accd1603a22be95f40861d72 175 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 8.6E-46 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABE28_000390 fabe1578accd1603a22be95f40861d72 175 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABE28_000390 fabe1578accd1603a22be95f40861d72 175 SUPERFAMILY SSF55083 3 158 9.68E-56 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABE28_000390 fabe1578accd1603a22be95f40861d72 175 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 2.4E-39 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABE28_000390 fabe1578accd1603a22be95f40861d72 175 Gene3D G3DSA:3.30.70.560 2 169 1.4E-58 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 ABE28_016165 784c093b8003b6527c535db7442f0dc2 170 Gene3D G3DSA:3.40.50.2020 1 170 3.9E-58 T 11-10-2018 ABE28_016165 784c093b8003b6527c535db7442f0dc2 170 Pfam PF00156 Phosphoribosyl transferase domain 26 149 1.6E-16 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_016165 784c093b8003b6527c535db7442f0dc2 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 169 3.6E-70 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ABE28_016165 784c093b8003b6527c535db7442f0dc2 170 SUPERFAMILY SSF53271 2 163 1.42E-49 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_016165 784c093b8003b6527c535db7442f0dc2 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.282 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 ABE28_015670 36b68ccc08c62773b8297ff97e80a297 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABE28_015670 36b68ccc08c62773b8297ff97e80a297 307 Gene3D G3DSA:3.40.50.1100 9 299 1.5E-117 T 11-10-2018 ABE28_015670 36b68ccc08c62773b8297ff97e80a297 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 1.0E-68 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_015670 36b68ccc08c62773b8297ff97e80a297 307 Gene3D G3DSA:3.40.50.1100 45 146 1.5E-117 T 11-10-2018 ABE28_015670 36b68ccc08c62773b8297ff97e80a297 307 SUPERFAMILY SSF53686 1 301 7.86E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 377 3.7E-115 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 Pfam PF01546 Peptidase family M20/M25/M40 74 385 5.3E-36 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 Gene3D G3DSA:3.40.630.10 18 374 1.6E-136 T 11-10-2018 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 SUPERFAMILY SSF53187 4 391 4.0E-85 T 11-10-2018 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 PIRSF PIRSF005962 1 392 2.4E-127 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 SUPERFAMILY SSF55031 185 296 4.19E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 Gene3D G3DSA:3.30.70.360 183 297 1.6E-136 T 11-10-2018 ABE28_008415 dbefcb7cce3c3e1bdc5b992755ea6a6d 397 Pfam PF07687 Peptidase dimerisation domain 188 282 1.8E-4 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_015445 01e2c9cb2eaea03252d3e2d724d3bfcf 94 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 92 7.8E-36 T 11-10-2018 IPR022477 Sporulation protein YqfC ABE28_015445 01e2c9cb2eaea03252d3e2d724d3bfcf 94 Pfam PF07873 YabP family 28 91 5.3E-18 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC ABE28_017765 d73285603b56eec5d0c239022f0437e9 397 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 395 8.6E-48 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 ABE28_017765 d73285603b56eec5d0c239022f0437e9 397 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 1.4E-18 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 ABE28_006070 a00522946750df04fa37baa3bb98881b 63 Pfam PF11151 Protein of unknown function (DUF2929) 1 54 9.1E-18 T 11-10-2018 IPR021324 Protein of unknown function DUF2929 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 Pfam PF01546 Peptidase family M20/M25/M40 76 384 6.7E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 Gene3D G3DSA:3.30.70.360 184 298 2.3E-130 T 11-10-2018 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 Pfam PF07687 Peptidase dimerisation domain 185 281 2.2E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 Gene3D G3DSA:3.40.630.10 16 377 2.3E-130 T 11-10-2018 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 SUPERFAMILY SSF55031 185 302 1.57E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 SUPERFAMILY SSF53187 4 392 7.23E-78 T 11-10-2018 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 PIRSF PIRSF005962 1 394 6.3E-111 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_008565 2bf08f8044e864b8c5d5b08c7fb11c88 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 380 5.1E-100 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 3.1E-110 T 11-10-2018 IPR008007 Peptidase M42 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 Gene3D G3DSA:2.40.30.40 75 162 1.0E-116 T 11-10-2018 IPR023367 Peptidase M42, domain 2 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 Gene3D G3DSA:3.40.630.10 10 340 1.0E-116 T 11-10-2018 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 SUPERFAMILY SSF101821 71 180 3.05E-31 T 11-10-2018 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 PIRSF PIRSF001123 2 356 2.5E-150 T 11-10-2018 IPR008007 Peptidase M42 ABE28_017410 adf46fa5bace15e35ecaca438912a31b 357 SUPERFAMILY SSF53187 4 351 1.74E-70 T 11-10-2018 ABE28_012965 e290eb04264e799a560f069921852221 251 SUPERFAMILY SSF46785 4 61 1.63E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012965 e290eb04264e799a560f069921852221 251 SMART SM01134 73 231 1.5E-65 T 11-10-2018 ABE28_012965 e290eb04264e799a560f069921852221 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ABE28_012965 e290eb04264e799a560f069921852221 251 SUPERFAMILY SSF100950 76 223 1.0E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_012965 e290eb04264e799a560f069921852221 251 Gene3D G3DSA:1.10.10.10 1 55 9.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012965 e290eb04264e799a560f069921852221 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_012965 e290eb04264e799a560f069921852221 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_012965 e290eb04264e799a560f069921852221 251 SMART SM00420 6 58 1.1E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_012965 e290eb04264e799a560f069921852221 251 Pfam PF00455 DeoR C terminal sensor domain 76 229 1.0E-46 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ABE28_012965 e290eb04264e799a560f069921852221 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 4.3E-18 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 SMART SM00636 39 446 2.4E-129 T 11-10-2018 IPR011583 Chitinase II GO:0008061 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 ProSitePatterns PS01095 Chitinases family 18 active site. 196 204 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 SMART SM00637 483 576 7.5E-22 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 SUPERFAMILY SSF51445 39 447 8.23E-96 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 Pfam PF00553 Cellulose binding domain 484 568 6.7E-20 T 11-10-2018 IPR001919 Carbohydrate-binding type-2 domain GO:0004553|GO:0005975|GO:0030246 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 Gene3D G3DSA:2.60.40.290 481 580 5.0E-24 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 Pfam PF00704 Glycosyl hydrolases family 18 40 446 2.7E-93 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 SUPERFAMILY SSF54556 334 417 8.49E-19 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 SUPERFAMILY SSF49384 482 575 1.4E-22 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 Gene3D G3DSA:3.20.20.80 41 446 5.3E-147 T 11-10-2018 ABE28_002505 09d94f966df3c30987a41c1f16a8b6b7 580 Gene3D G3DSA:3.10.50.10 333 417 5.3E-147 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SMART SM00479 4 171 1.1E-42 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Pfam PF00929 Exonuclease 6 161 3.0E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Pfam PF13307 Helicase C-terminal domain 745 906 5.8E-38 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 173 3.4E-23 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SUPERFAMILY SSF53098 4 212 1.4E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SMART SM00491 760 894 3.5E-38 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SMART SM00487 253 534 1.4E-4 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Gene3D G3DSA:3.30.420.10 1 173 1.5E-46 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Pfam PF04851 Type III restriction enzyme, res subunit 255 481 4.2E-7 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 4 925 4.6E-263 T 11-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 926 27.502 T 11-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SUPERFAMILY SSF52540 421 878 6.25E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 SUPERFAMILY SSF52540 211 889 1.45E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Gene3D G3DSA:3.40.50.300 255 511 9.7E-40 T 11-10-2018 ABE28_014125 48555aef19c7dad06fcb8ed2b888c431 927 Gene3D G3DSA:3.40.50.300 727 924 7.9E-42 T 11-10-2018 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 142 155 6.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 115 132 6.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 6.8E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 281 369 2.2E-18 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 SUPERFAMILY SSF69189 271 368 2.35E-18 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 Gene3D G3DSA:3.40.710.10 17 278 1.9E-85 T 11-10-2018 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 Gene3D G3DSA:2.60.410.10 279 369 8.2E-20 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 259 2.7E-85 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 SUPERFAMILY SSF56601 1 279 1.93E-76 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_014615 44a30b79e23a3217f93703202a7bc4c0 388 SMART SM00936 279 370 2.3E-21 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_017685 d114d3228265de76346852120410623e 421 SUPERFAMILY SSF51905 2 418 5.83E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017685 d114d3228265de76346852120410623e 421 Gene3D G3DSA:2.40.30.10 192 360 3.9E-122 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 SUPERFAMILY SSF160996 193 361 2.88E-47 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 Pfam PF03486 HI0933-like protein 3 413 1.3E-152 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 Gene3D G3DSA:1.10.8.260 279 343 3.9E-122 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily ABE28_017685 d114d3228265de76346852120410623e 421 Gene3D G3DSA:3.50.50.60 6 409 3.9E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017685 d114d3228265de76346852120410623e 421 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 5 413 1.9E-143 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like ABE28_017685 d114d3228265de76346852120410623e 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 9.9E-6 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 9.9E-6 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 5.9E-11 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 405 420 5.9E-11 T 11-10-2018 ABE28_017685 d114d3228265de76346852120410623e 421 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 159 168 5.9E-11 T 11-10-2018 ABE28_014800 5fa39222938fa5fbcd8a71f645705283 517 SUPERFAMILY SSF52096 245 517 1.83E-88 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_014800 5fa39222938fa5fbcd8a71f645705283 517 Gene3D G3DSA:3.90.226.10 264 517 3.3E-89 T 11-10-2018 ABE28_014800 5fa39222938fa5fbcd8a71f645705283 517 Gene3D G3DSA:3.90.226.10 4 260 2.8E-93 T 11-10-2018 ABE28_014800 5fa39222938fa5fbcd8a71f645705283 517 SUPERFAMILY SSF52096 3 258 2.49E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_014800 5fa39222938fa5fbcd8a71f645705283 517 Pfam PF01039 Carboxyl transferase domain 30 515 8.5E-196 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABE28_006320 54284a9f3e18736fd73d9b93e147d7b5 159 Pfam PF11188 Protein of unknown function (DUF2975) 32 159 1.6E-37 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 ABE28_018820 4781353058c124d24523d70bcd2c3763 275 PIRSF PIRSF002854 1 275 1.3E-79 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_018820 4781353058c124d24523d70bcd2c3763 275 SUPERFAMILY SSF53850 39 275 5.26E-69 T 11-10-2018 ABE28_018820 4781353058c124d24523d70bcd2c3763 275 Gene3D G3DSA:3.40.190.10 48 273 9.0E-82 T 11-10-2018 ABE28_018820 4781353058c124d24523d70bcd2c3763 275 Gene3D G3DSA:3.40.190.10 121 225 9.0E-82 T 11-10-2018 ABE28_018820 4781353058c124d24523d70bcd2c3763 275 Pfam PF03180 NLPA lipoprotein 40 275 2.7E-72 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_023010 9939c61792793c59b031125c04f5d649 376 Gene3D G3DSA:1.20.140.10 234 376 6.7E-56 T 11-10-2018 ABE28_023010 9939c61792793c59b031125c04f5d649 376 SUPERFAMILY SSF56645 1 240 4.97E-82 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 Gene3D G3DSA:2.40.110.10 120 233 1.5E-44 T 11-10-2018 ABE28_023010 9939c61792793c59b031125c04f5d649 376 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 375 3.2E-52 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 Gene3D G3DSA:1.10.540.10 1 119 3.7E-45 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 3.5E-38 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 3.5E-25 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_023010 9939c61792793c59b031125c04f5d649 376 PIRSF PIRSF016578 4 366 2.5E-20 T 11-10-2018 ABE28_023010 9939c61792793c59b031125c04f5d649 376 SUPERFAMILY SSF47203 226 375 9.18E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_019595 8073bec29474eb2d8994d305401e0557 163 Gene3D G3DSA:1.10.10.10 101 159 1.4E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019595 8073bec29474eb2d8994d305401e0557 163 SUPERFAMILY SSF88659 102 155 7.29E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_019595 8073bec29474eb2d8994d305401e0557 163 Gene3D G3DSA:1.10.1740.10 2 78 7.1E-13 T 11-10-2018 ABE28_019595 8073bec29474eb2d8994d305401e0557 163 Pfam PF04542 Sigma-70 region 2 17 75 7.2E-8 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_019595 8073bec29474eb2d8994d305401e0557 163 SUPERFAMILY SSF88946 4 84 1.06E-11 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_019595 8073bec29474eb2d8994d305401e0557 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 156 1.7E-20 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_019595 8073bec29474eb2d8994d305401e0557 163 Pfam PF08281 Sigma-70, region 4 105 154 1.9E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SUPERFAMILY SSF47384 204 269 1.14E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 82 200 4.0E-20 T 11-10-2018 IPR000014 PAS domain ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SMART SM00388 210 273 2.8E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SMART SM00091 83 149 3.0E-7 T 11-10-2018 IPR000014 PAS domain ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SUPERFAMILY SSF55874 271 420 8.64E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Pfam PF08448 PAS fold 90 197 3.6E-13 T 11-10-2018 IPR013656 PAS fold-4 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Pfam PF00512 His Kinase A (phospho-acceptor) domain 212 271 3.9E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SMART SM00387 316 422 2.4E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 317 421 9.7E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 400 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 419 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 5.3E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Gene3D G3DSA:3.30.565.10 274 424 1.4E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 SUPERFAMILY SSF55785 72 193 3.49E-19 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Gene3D G3DSA:1.10.287.130 194 272 2.0E-12 T 11-10-2018 ABE28_002535 da08a802dd25424e11d34ac1262d1778 425 Gene3D G3DSA:3.30.450.20 68 193 6.1E-21 T 11-10-2018 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 SUPERFAMILY SSF46458 34 174 3.05E-37 T 11-10-2018 IPR009050 Globin-like superfamily ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 Gene3D G3DSA:1.10.287.950 202 430 2.8E-42 T 11-10-2018 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 SMART SM00283 190 430 1.9E-25 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 263 417 8.4E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 Pfam PF11563 Protoglobin 34 182 1.8E-38 T 11-10-2018 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 Gene3D G3DSA:1.10.490.10 24 175 6.4E-39 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABE28_011220 33cb8130a778a736c8fda28ff42142b4 430 SUPERFAMILY SSF58104 197 426 6.93E-51 T 11-10-2018 ABE28_005935 80e7ef1415c408c87fdd3586d5a11079 415 Pfam PF13416 Bacterial extracellular solute-binding protein 67 362 5.6E-39 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_005935 80e7ef1415c408c87fdd3586d5a11079 415 SUPERFAMILY SSF53850 52 412 1.86E-71 T 11-10-2018 ABE28_005935 80e7ef1415c408c87fdd3586d5a11079 415 Gene3D G3DSA:3.40.190.10 61 375 4.0E-91 T 11-10-2018 ABE28_005935 80e7ef1415c408c87fdd3586d5a11079 415 Gene3D G3DSA:3.40.190.10 161 408 4.0E-91 T 11-10-2018 ABE28_002835 05155730a05b89881f1077e48639ca68 244 Gene3D G3DSA:3.40.50.300 2 243 4.3E-80 T 11-10-2018 ABE28_002835 05155730a05b89881f1077e48639ca68 244 Pfam PF00005 ABC transporter 19 169 1.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002835 05155730a05b89881f1077e48639ca68 244 PIRSF PIRSF039085 1 244 2.4E-118 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_002835 05155730a05b89881f1077e48639ca68 244 SMART SM00382 28 217 1.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002835 05155730a05b89881f1077e48639ca68 244 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002835 05155730a05b89881f1077e48639ca68 244 SUPERFAMILY SSF52540 3 239 1.77E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-21 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-40 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 SUPERFAMILY SSF47729 1 90 8.98E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-36 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_010630 e03f12858d9586da1c88c76696a29c09 90 SMART SM00411 1 90 1.9E-47 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_019115 9ac40b9e5930b371f53619d812e345c2 196 SUPERFAMILY SSF53850 20 181 3.26E-12 T 11-10-2018 ABE28_019115 9ac40b9e5930b371f53619d812e345c2 196 Gene3D G3DSA:3.40.190.10 22 101 3.8E-9 T 11-10-2018 ABE28_019115 9ac40b9e5930b371f53619d812e345c2 196 Pfam PF00800 Prephenate dehydratase 21 180 9.3E-10 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 ABE28_019115 9ac40b9e5930b371f53619d812e345c2 196 Gene3D G3DSA:3.40.190.10 102 180 3.8E-9 T 11-10-2018 ABE28_016055 17b7d53a4476beb9c76b060b911029f7 229 Pfam PF02706 Chain length determinant protein 3 93 2.5E-21 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ABE28_016055 17b7d53a4476beb9c76b060b911029f7 229 Pfam PF13807 G-rich domain on putative tyrosine kinase 141 193 2.1E-8 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Gene3D G3DSA:2.70.20.10 210 476 6.1E-145 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Gene3D G3DSA:1.10.290.10 270 400 6.1E-145 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 SMART SM00493 3 126 4.3E-17 T 11-10-2018 IPR006171 TOPRIM domain ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 511 525 3.8E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 3.8E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 3.8E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 386 402 3.8E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 304 313 3.8E-25 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Pfam PF01131 DNA topoisomerase 152 583 1.4E-114 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 726 2.3E-257 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 SUPERFAMILY SSF56712 3 598 6.8E-174 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 298 313 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Gene3D G3DSA:3.40.50.140 3 154 8.5E-54 T 11-10-2018 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 SMART SM00436 126 216 3.1E-37 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Pfam PF01751 Toprim domain 5 134 6.5E-16 T 11-10-2018 IPR006171 TOPRIM domain ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 SMART SM00437 261 549 1.9E-79 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 638 68.822 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 ABE28_023290 c8aa6b34a98ae7365b3402dd3a2e5d9f 730 Gene3D G3DSA:1.10.460.10 160 593 6.1E-145 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 SUPERFAMILY SSF52768 6 368 6.71E-105 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 16 36 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 350 369 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 313 332 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 333 349 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 86 100 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 274 290 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01272 Acetoin utilisation ACUC protein signature 107 120 2.8E-45 T 11-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01270 Histone deacetylase superfamily signature 249 259 3.7E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01270 Histone deacetylase superfamily signature 163 178 3.7E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 PRINTS PR01270 Histone deacetylase superfamily signature 130 153 3.7E-17 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 Gene3D G3DSA:3.40.800.20 3 367 1.9E-100 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABE28_017315 3f8fd0cbb0f9bf6d660f4f4d2238e80a 393 Pfam PF00850 Histone deacetylase domain 22 317 4.2E-78 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 125 141 2.5E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 89 104 2.5E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 45 53 2.5E-17 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 ProSitePatterns PS00855 Signal peptidases II signature. 92 104 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 TIGRFAM TIGR00077 lspA: signal peptidase II 1 151 4.8E-49 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 Pfam PF01252 Signal peptidase (SPase) II 6 144 4.3E-39 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_007595 7b5bad10f6a675d80dba94f3b39eb0a1 156 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 150 16.573 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 ABE28_016355 fbc5ae425e8585366bb93b45eda77585 249 Gene3D G3DSA:2.70.70.10 118 247 2.1E-20 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_016355 fbc5ae425e8585366bb93b45eda77585 249 SUPERFAMILY SSF51261 116 244 3.19E-16 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_016355 fbc5ae425e8585366bb93b45eda77585 249 Pfam PF01551 Peptidase family M23 150 242 2.6E-18 T 11-10-2018 IPR016047 Peptidase M23 ABE28_022725 b6619d5bbf2a901f6d6f9431492a234d 278 SUPERFAMILY SSF117143 117 219 5.36E-13 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_022725 b6619d5bbf2a901f6d6f9431492a234d 278 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 273 8.3E-16 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022725 b6619d5bbf2a901f6d6f9431492a234d 278 Pfam PF00460 Flagella basal body rod protein 5 35 1.3E-9 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_022725 b6619d5bbf2a901f6d6f9431492a234d 278 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ABE28_022725 b6619d5bbf2a901f6d6f9431492a234d 278 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 158 9.0E-30 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.0E-40 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.0E-40 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.0E-40 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.0E-40 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.0E-40 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 Gene3D G3DSA:3.50.50.60 152 273 1.1E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 SUPERFAMILY SSF51905 7 340 2.13E-67 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 8.2E-77 T 11-10-2018 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 Gene3D G3DSA:3.30.390.30 348 468 7.0E-44 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 1.3E-36 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 Gene3D G3DSA:3.50.50.60 13 335 1.1E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 PIRSF PIRSF000350 3 459 1.1E-102 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 1.9E-175 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 8.2E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_007160 1c20d9a5855c4e71475a32561f06d6eb 470 SUPERFAMILY SSF55424 346 468 1.25E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_023110 be85422e9926ab5ff46620f8cb8a4c85 249 Pfam PF06778 Chlorite dismutase 33 237 1.2E-76 T 11-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase ABE28_023110 be85422e9926ab5ff46620f8cb8a4c85 249 Gene3D G3DSA:3.30.70.1100 139 249 1.6E-46 T 11-10-2018 ABE28_023110 be85422e9926ab5ff46620f8cb8a4c85 249 SUPERFAMILY SSF54909 1 247 4.02E-94 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_023110 be85422e9926ab5ff46620f8cb8a4c85 249 Hamap MF_01442 Putative heme-dependent peroxidase . 1 249 57.192 T 11-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family ABE28_023110 be85422e9926ab5ff46620f8cb8a4c85 249 Gene3D G3DSA:3.30.70.1030 1 138 8.0E-55 T 11-10-2018 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 Pfam PF01979 Amidohydrolase family 55 339 5.5E-21 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 Hamap MF_01518 Adenine deaminase [ade]. 4 565 31.712 T 11-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 Gene3D G3DSA:2.30.40.10 2 339 2.3E-92 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 Pfam PF13382 Adenine deaminase C-terminal domain 396 560 3.3E-53 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 Gene3D G3DSA:3.20.20.140 59 303 2.3E-92 T 11-10-2018 ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 SUPERFAMILY SSF51556 59 308 1.11E-20 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_019330 41f3a33efeb915b381f727c1db25bb15 572 SUPERFAMILY SSF51338 3 77 2.99E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_020165 c7d5341c01ca745f4ea3d15858863efb 417 SUPERFAMILY SSF103473 10 404 1.83E-39 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_020165 c7d5341c01ca745f4ea3d15858863efb 417 Pfam PF07690 Major Facilitator Superfamily 16 361 2.2E-23 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_020165 c7d5341c01ca745f4ea3d15858863efb 417 Gene3D G3DSA:1.20.1250.20 10 398 1.5E-32 T 11-10-2018 ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 SUPERFAMILY SSF51182 54 177 1.31E-22 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 Gene3D G3DSA:2.60.120.10 69 175 3.9E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 Pfam PF01381 Helix-turn-helix 7 59 8.4E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 SMART SM00530 6 61 1.3E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 Gene3D G3DSA:1.10.260.40 1 68 7.5E-22 T 11-10-2018 ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 SUPERFAMILY SSF47413 1 66 3.1E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_001055 9b231c8980537de6ce3a7dba2c47383a 180 Pfam PF07883 Cupin domain 124 174 2.4E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 4.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 Gene3D G3DSA:3.40.50.720 3 244 1.2E-79 T 11-10-2018 ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 5.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 SUPERFAMILY SSF51735 6 243 5.0E-80 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 2.1E-69 T 11-10-2018 ABE28_017480 e5f889a19765d4a5260fe42633b06f68 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 Gene3D G3DSA:3.30.700.10 10 69 2.3E-10 T 11-10-2018 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 5.6E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 SUPERFAMILY SSF54523 10 95 1.1E-13 T 11-10-2018 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 PIRSF PIRSF029928 1 101 2.3E-34 T 11-10-2018 IPR016940 ComG operon protein C GO:0030420 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 PRINTS PR00813 Bacterial general secretion pathway protein G signature 9 34 5.7E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 PRINTS PR00813 Bacterial general secretion pathway protein G signature 45 63 5.7E-9 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 8 28 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABE28_015120 9e21c5df13a7517ad234a5c18168cb55 102 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 29 1.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABE28_004115 fe99d6910ed8d6eb92cb778954b2b666 381 Gene3D G3DSA:3.20.20.30 1 376 4.5E-84 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_004115 fe99d6910ed8d6eb92cb778954b2b666 381 SUPERFAMILY SSF51679 1 374 1.7E-70 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_004115 fe99d6910ed8d6eb92cb778954b2b666 381 Pfam PF00296 Luciferase-like monooxygenase 1 336 5.1E-44 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_008445 0b1a6a8fea57ede22fbb527651a5cd0d 213 Gene3D G3DSA:3.40.50.360 1 213 8.0E-63 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_008445 0b1a6a8fea57ede22fbb527651a5cd0d 213 Pfam PF02525 Flavodoxin-like fold 3 205 2.3E-40 T 11-10-2018 IPR003680 Flavodoxin-like fold ABE28_008445 0b1a6a8fea57ede22fbb527651a5cd0d 213 SUPERFAMILY SSF52218 1 210 2.02E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_008445 0b1a6a8fea57ede22fbb527651a5cd0d 213 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 26.4 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Gene3D G3DSA:3.30.470.20 366 474 3.4E-16 T 11-10-2018 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Gene3D G3DSA:3.90.190.20 727 870 7.1E-18 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Pfam PF08443 RimK-like ATP-grasp domain 214 314 1.0E-7 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Pfam PF08443 RimK-like ATP-grasp domain 386 454 4.2E-5 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Pfam PF08245 Mur ligase middle domain 486 698 1.7E-24 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 SUPERFAMILY SSF53244 723 854 1.34E-19 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 TIGRFAM TIGR02068 cya_phycin_syn: cyanophycin synthetase 3 858 9.8E-300 T 11-10-2018 IPR011810 Cyanophycin synthetase GO:0005524|GO:0009059|GO:0016874 MetaCyc: PWY-7052 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Pfam PF02875 Mur ligase family, glutamate ligase domain 723 797 2.4E-8 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Gene3D G3DSA:3.30.1490.20 215 305 6.0E-15 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 SUPERFAMILY SSF56059 215 474 4.0E-34 T 11-10-2018 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 Gene3D G3DSA:3.40.1190.10 477 716 3.6E-37 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_006715 3d69ddfecd11fdbf16ede82ef600e28c 873 SUPERFAMILY SSF53623 444 734 4.32E-41 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 SUPERFAMILY SSF53850 87 282 2.29E-29 T 11-10-2018 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 SUPERFAMILY SSF46785 1 111 2.47E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 5.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 Gene3D G3DSA:1.10.10.10 1 82 1.0E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 Pfam PF03466 LysR substrate binding domain 87 281 8.3E-33 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_022020 9f6e421d2dadfaa526df5784caa2518b 290 Gene3D G3DSA:3.40.190.290 83 284 1.3E-70 T 11-10-2018 ABE28_022880 144d5435b9eacaa551ecc6821a714d30 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.956 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ABE28_022880 144d5435b9eacaa551ecc6821a714d30 209 Gene3D G3DSA:3.40.50.2020 2 209 5.1E-80 T 11-10-2018 ABE28_022880 144d5435b9eacaa551ecc6821a714d30 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.6E-72 T 11-10-2018 ABE28_022880 144d5435b9eacaa551ecc6821a714d30 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 4 209 1.6E-91 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ABE28_022880 144d5435b9eacaa551ecc6821a714d30 209 SUPERFAMILY SSF53271 4 207 1.23E-71 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_015090 d19981f93a61777d763c401b3c2787a2 265 Pfam PF11079 Bacterial protein YqhG of unknown function 1 259 1.3E-122 T 11-10-2018 IPR024562 Uncharacterised protein family YqhG ABE28_015090 d19981f93a61777d763c401b3c2787a2 265 ProDom PD123329 YQHG BH2818 1 259 3.0E-91 T 11-10-2018 IPR024562 Uncharacterised protein family YqhG ABE28_011145 7d0091b254e6865eea8669401b0c2a06 377 SUPERFAMILY SSF51679 1 347 1.02E-94 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_011145 7d0091b254e6865eea8669401b0c2a06 377 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 1.5E-180 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABE28_011145 7d0091b254e6865eea8669401b0c2a06 377 Gene3D G3DSA:3.20.20.30 1 360 8.2E-143 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_011145 7d0091b254e6865eea8669401b0c2a06 377 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 377 73.706 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABE28_011145 7d0091b254e6865eea8669401b0c2a06 377 Pfam PF00296 Luciferase-like monooxygenase 1 323 3.6E-89 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 PIRSF PIRSF005962 1 392 3.6E-121 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 SUPERFAMILY SSF55031 184 297 2.49E-27 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 374 5.9E-102 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 Gene3D G3DSA:3.40.630.10 16 371 1.9E-126 T 11-10-2018 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 SUPERFAMILY SSF53187 5 390 1.41E-75 T 11-10-2018 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 Gene3D G3DSA:3.30.70.360 182 296 1.9E-126 T 11-10-2018 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 Pfam PF01546 Peptidase family M20/M25/M40 71 385 1.9E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_011830 6fc1f326f381465392627decab9fd9f5 393 Pfam PF07687 Peptidase dimerisation domain 190 278 4.0E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Gene3D G3DSA:1.10.10.10 104 156 5.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 PRINTS PR00046 Major sigma-70 factor signature 238 249 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 PRINTS PR00046 Major sigma-70 factor signature 223 238 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 PRINTS PR00046 Major sigma-70 factor signature 206 218 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 PRINTS PR00046 Major sigma-70 factor signature 58 71 9.5E-8 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 6.6E-87 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Pfam PF04545 Sigma-70, region 4 202 251 3.4E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 SUPERFAMILY SSF88659 107 182 1.05E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Gene3D G3DSA:1.20.120.1810 1 102 2.6E-14 T 11-10-2018 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 SUPERFAMILY SSF88946 9 103 5.63E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 1 254 1.5E-125 T 11-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Pfam PF04539 Sigma-70 region 3 113 181 5.8E-15 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Pfam PF04542 Sigma-70 region 2 35 103 3.8E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 Gene3D G3DSA:1.10.10.10 184 257 1.0E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 SUPERFAMILY SSF88659 177 255 7.48E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_001430 16fd75f76d2f3310c750a879939caf55 262 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 252 1.7E-33 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 104 278 3.1E-61 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 SUPERFAMILY SSF55021 448 520 2.83E-17 T 11-10-2018 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Gene3D G3DSA:3.30.70.260 451 524 5.2E-21 T 11-10-2018 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Pfam PF01842 ACT domain 453 509 2.6E-8 T 11-10-2018 IPR002912 ACT domain ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 4.8E-37 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 SUPERFAMILY SSF51735 98 279 5.46E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 523 1.7E-204 T 11-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Gene3D G3DSA:3.40.50.720 95 276 7.7E-118 T 11-10-2018 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Gene3D G3DSA:3.40.50.720 5 302 7.7E-118 T 11-10-2018 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 Gene3D G3DSA:3.30.1330.90 315 450 5.6E-36 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 SUPERFAMILY SSF52283 2 132 2.08E-36 T 11-10-2018 ABE28_014460 5278f41a82e30974c8687be881fda1cf 524 SUPERFAMILY SSF143548 316 446 8.11E-36 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_002690 4ebea80aedfbe649ab9d17795f875651 171 Gene3D G3DSA:3.40.50.880 1 170 3.7E-52 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_002690 4ebea80aedfbe649ab9d17795f875651 171 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 171 4.0E-56 T 11-10-2018 IPR006286 Deglycase PfpI ABE28_002690 4ebea80aedfbe649ab9d17795f875651 171 SUPERFAMILY SSF52317 1 170 5.77E-44 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_002690 4ebea80aedfbe649ab9d17795f875651 171 Pfam PF01965 DJ-1/PfpI family 3 167 8.1E-54 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_014605 543df41b72914686295030d644fe23cf 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 36.188 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 ABE28_014605 543df41b72914686295030d644fe23cf 146 Gene3D G3DSA:3.30.565.10 1 142 1.1E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014605 543df41b72914686295030d644fe23cf 146 Pfam PF13581 Histidine kinase-like ATPase domain 10 136 1.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_014605 543df41b72914686295030d644fe23cf 146 SUPERFAMILY SSF55874 28 134 1.96E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014605 543df41b72914686295030d644fe23cf 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 1.6E-71 T 11-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 ABE28_014605 543df41b72914686295030d644fe23cf 146 SMART SM00387 35 140 7.3E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Pfam PF13932 GidA associated domain 401 615 5.7E-78 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 SMART SM01228 545 616 2.8E-42 T 11-10-2018 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Gene3D G3DSA:3.50.50.60 1 226 2.7E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Gene3D G3DSA:3.50.50.60 296 458 6.4E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Gene3D G3DSA:1.10.150.570 568 620 1.6E-23 T 11-10-2018 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 SUPERFAMILY SSF51905 7 261 4.8E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Gene3D G3DSA:1.10.10.1800 459 549 4.2E-26 T 11-10-2018 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 7.5E-6 T 11-10-2018 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 7.5E-6 T 11-10-2018 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 3.1E-294 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Pfam PF01134 Glucose inhibited division protein A 9 398 2.2E-172 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABE28_023780 28d124727b7e4c641687dcf4c151da4b 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.354 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 ABE28_004345 b41da5077ef00619228bda4f680ed7a3 127 Gene3D G3DSA:2.60.120.10 18 119 1.4E-22 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_004345 b41da5077ef00619228bda4f680ed7a3 127 Pfam PF07883 Cupin domain 59 114 8.8E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_004345 b41da5077ef00619228bda4f680ed7a3 127 SUPERFAMILY SSF51182 21 120 1.88E-13 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 127 407 1.1E-42 T 11-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 408 1.7E-197 T 11-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 3 102 5.7E-6 T 11-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 Gene3D G3DSA:3.20.20.110 122 410 1.3E-96 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 SUPERFAMILY SSF51649 122 408 3.66E-84 T 11-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 Gene3D G3DSA:3.30.70.150 1 121 2.2E-28 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 SUPERFAMILY SSF54966 1 117 1.71E-28 T 11-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 ABE28_013145 75810766e97ebe18b5a62cbf959038af 410 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 408 57.457 T 11-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Gene3D G3DSA:3.10.290.10 326 418 1.9E-33 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 43 65 2.2E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 216 228 2.2E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 181 203 2.2E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 160 175 2.2E-29 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Gene3D G3DSA:3.40.50.620 1 222 1.9E-87 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 SUPERFAMILY SSF55174 321 417 6.54E-23 T 11-10-2018 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Pfam PF01479 S4 domain 355 396 2.5E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 SUPERFAMILY SSF52374 3 323 2.03E-108 T 11-10-2018 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 39 49 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 417 9.7E-134 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Gene3D G3DSA:1.10.240.10 223 325 1.2E-38 T 11-10-2018 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 1 418 44.112 T 11-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 SMART SM00363 353 415 1.1E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017290 9e44a76c6ae4f82b8a535b3d2a399481 418 Pfam PF00579 tRNA synthetases class I (W and Y) 28 323 7.0E-83 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_005655 9c644c934e66e2349c0ec48a945f07a6 1005 SUPERFAMILY SSF52540 1 982 4.32E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005655 9c644c934e66e2349c0ec48a945f07a6 1005 Pfam PF13514 AAA domain 1 205 1.1E-22 T 11-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain ABE28_005655 9c644c934e66e2349c0ec48a945f07a6 1005 Gene3D G3DSA:3.40.50.300 743 992 1.0E-21 T 11-10-2018 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 SUPERFAMILY SSF89082 156 243 1.44E-27 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.6E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.6E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.6E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 Gene3D G3DSA:1.10.1660.10 1 135 3.9E-52 T 11-10-2018 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 SUPERFAMILY SSF46955 3 113 5.86E-31 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 Pfam PF13411 MerR HTH family regulatory protein 3 70 4.1E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 SMART SM00422 3 72 6.8E-28 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 Gene3D G3DSA:1.10.490.50 136 243 1.9E-19 T 11-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain ABE28_018160 40f6bdd82c73688a07e0b5f819fbde2f 245 Pfam PF07739 TipAS antibiotic-recognition domain 130 238 4.9E-30 T 11-10-2018 IPR012925 TipAS antibiotic-recognition domain ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 564 672 1.0E-11 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 SUPERFAMILY SSF52794 423 508 6.28E-10 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Gene3D G3DSA:1.10.10.10 3 71 3.4E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Gene3D G3DSA:1.10.1790.10 211 308 1.6E-7 T 11-10-2018 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 SUPERFAMILY SSF63520 205 306 2.22E-10 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Gene3D G3DSA:1.10.1790.10 316 416 4.2E-22 T 11-10-2018 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Gene3D G3DSA:3.40.50.2300 421 509 1.3E-10 T 11-10-2018 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 SUPERFAMILY SSF55804 561 666 1.83E-13 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 SUPERFAMILY SSF63520 317 417 5.89E-23 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Pfam PF00874 PRD domain 236 303 1.4E-7 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Pfam PF00874 PRD domain 325 412 9.3E-20 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_011110 b656aadef2d6e74365f39d6cd2aa3bfe 699 Gene3D G3DSA:3.40.930.10 556 678 8.8E-14 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_005010 f0d5bf5aace760098a17bf47f981012e 250 Gene3D G3DSA:3.40.50.970 1 250 2.1E-104 T 11-10-2018 ABE28_005010 f0d5bf5aace760098a17bf47f981012e 250 SUPERFAMILY SSF52518 1 249 4.02E-87 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005010 f0d5bf5aace760098a17bf47f981012e 250 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 245 5.4E-56 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_022990 0a962fd7c56dc6a77de127b949c3052f 193 Gene3D G3DSA:1.10.10.1250 2 82 7.6E-32 T 11-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily ABE28_022990 0a962fd7c56dc6a77de127b949c3052f 193 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 13 93 8.9E-33 T 11-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 ABE28_022990 0a962fd7c56dc6a77de127b949c3052f 193 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 3.7E-8 T 11-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 ABE28_022990 0a962fd7c56dc6a77de127b949c3052f 193 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 192 15.053 T 11-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 SUPERFAMILY SSF52096 11 190 7.87E-69 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 Gene3D G3DSA:3.90.226.10 1 194 1.3E-79 T 11-10-2018 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 Pfam PF00574 Clp protease 13 192 8.5E-82 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 42.45 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 1.5E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 1.5E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 1.5E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 1.5E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 1.5E-48 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site ABE28_003745 f0f5d376906f12b060805de127a5cabc 194 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 4.1E-96 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_011820 a46312acbde9acc8a1b871eb046c70d3 190 Gene3D G3DSA:1.10.443.10 11 188 2.4E-31 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_011820 a46312acbde9acc8a1b871eb046c70d3 190 SUPERFAMILY SSF56349 12 184 1.41E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_011820 a46312acbde9acc8a1b871eb046c70d3 190 Pfam PF00589 Phage integrase family 25 175 1.6E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 31 209 2.7E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 SUPERFAMILY SSF88659 123 210 1.57E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 SUPERFAMILY SSF88946 18 105 1.02E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 Pfam PF08281 Sigma-70, region 4 159 205 1.9E-9 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 14 210 1.3E-111 T 11-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 177 204 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 PIRSF PIRSF002939 4 216 7.7E-109 T 11-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 Pfam PF04542 Sigma-70 region 2 36 105 1.4E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000500 3547eb68076c6323fec282b3de0eef70 216 SMART SM00421 160 209 0.0041 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_019945 d75d4dd0b1a7910d5a297a1c0c20140a 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 7.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_019945 d75d4dd0b1a7910d5a297a1c0c20140a 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 36 59 7.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_019945 d75d4dd0b1a7910d5a297a1c0c20140a 192 SUPERFAMILY SSF46689 4 86 4.99E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_019945 d75d4dd0b1a7910d5a297a1c0c20140a 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.1E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_019945 d75d4dd0b1a7910d5a297a1c0c20140a 192 Gene3D G3DSA:1.10.357.10 3 191 2.2E-27 T 11-10-2018 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 SMART SM00845 325 472 5.3E-81 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 141 155 - T 11-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 SUPERFAMILY SSF89095 294 399 4.19E-37 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 472 6.2E-182 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 Gene3D G3DSA:1.10.150.380 297 410 7.7E-39 T 11-10-2018 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 Pfam PF02934 GatB/GatE catalytic domain 5 284 1.1E-111 T 11-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 Gene3D G3DSA:1.10.10.410 412 475 6.8E-27 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 473 39.0 T 11-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 Pfam PF02637 GatB domain 325 471 4.7E-56 T 11-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 ABE28_001995 f27f442ee47d33abe7609c28bff83ec2 475 SUPERFAMILY SSF55931 4 293 1.11E-120 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABE28_013570 679ab53a1b56558bc5822d41a5860aad 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 290 3.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_013570 679ab53a1b56558bc5822d41a5860aad 299 SUPERFAMILY SSF161098 62 287 4.84E-62 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013570 679ab53a1b56558bc5822d41a5860aad 299 Gene3D G3DSA:1.10.3720.10 58 298 5.1E-73 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013570 679ab53a1b56558bc5822d41a5860aad 299 SUPERFAMILY SSF160964 14 49 6.8E-6 T 11-10-2018 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 Pfam PF00463 Isocitrate lyase family 11 250 3.5E-57 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 248 2.1E-106 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 Gene3D G3DSA:3.20.20.60 3 406 1.8E-170 T 11-10-2018 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 ProSitePatterns PS00161 Isocitrate lyase signature. 184 189 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 SUPERFAMILY SSF51621 4 423 7.18E-155 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_016975 6a2cc7d1e8e37b0a6cca4730698bdc4c 427 PIRSF PIRSF001362 1 426 7.2E-238 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 ABE28_020320 1bac4f0e1ba6d3d5b1c6dc82b70a6fcd 116 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 102 3.7E-7 T 11-10-2018 ABE28_020320 1bac4f0e1ba6d3d5b1c6dc82b70a6fcd 116 SUPERFAMILY SSF54593 5 116 3.47E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020320 1bac4f0e1ba6d3d5b1c6dc82b70a6fcd 116 Gene3D G3DSA:3.10.180.10 1 116 2.0E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 6 395 52.929 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 85 99 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 11 393 1.2E-192 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 SUPERFAMILY SSF53686 7 392 4.85E-146 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 Gene3D G3DSA:3.40.50.1100 14 210 1.4E-191 T 11-10-2018 ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 58 382 1.9E-45 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 PIRSF PIRSF001413 2 401 4.2E-167 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007220 15bec3d8d82b29f3b4be25d6c0c2f34d 401 Gene3D G3DSA:3.40.50.1100 58 388 1.4E-191 T 11-10-2018 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 Gene3D G3DSA:2.60.40.1180 473 554 2.5E-22 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_009865 4d76253056bd77e0bc723680f557a728 559 Gene3D G3DSA:3.20.20.80 4 464 1.9E-189 T 11-10-2018 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 Gene3D G3DSA:3.90.400.10 103 171 1.9E-189 T 11-10-2018 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 4 549 2.5E-271 T 11-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 SUPERFAMILY SSF51011 472 551 1.53E-17 T 11-10-2018 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 SUPERFAMILY SSF51445 4 469 2.75E-146 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_009865 4d76253056bd77e0bc723680f557a728 559 Pfam PF16657 Maltogenic Amylase, C-terminal domain 472 528 1.8E-6 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal ABE28_009865 4d76253056bd77e0bc723680f557a728 559 Pfam PF00128 Alpha amylase, catalytic domain 26 369 2.8E-120 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_009865 4d76253056bd77e0bc723680f557a728 559 SMART SM00642 11 411 2.0E-153 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Pfam PF00672 HAMP domain 207 256 1.5E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 556 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 600 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 581 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 528 542 9.2E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Gene3D G3DSA:3.30.565.10 453 610 9.7E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SUPERFAMILY SSF158472 207 256 1.57E-9 T 11-10-2018 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SMART SM00387 491 603 2.2E-41 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SUPERFAMILY SSF55874 435 603 1.07E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SMART SM00304 207 259 6.1E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 379 3.2E-6 T 11-10-2018 IPR000014 PAS domain ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SUPERFAMILY SSF47384 365 446 2.94E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Pfam PF00989 PAS fold 268 335 2.0E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 602 3.9E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SMART SM00091 266 332 7.1E-9 T 11-10-2018 IPR000014 PAS domain ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SUPERFAMILY SSF55785 255 371 1.26E-11 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Gene3D G3DSA:3.30.450.20 274 370 1.4E-22 T 11-10-2018 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 SMART SM00388 379 446 2.7E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Gene3D G3DSA:1.10.287.130 371 450 1.4E-29 T 11-10-2018 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 445 9.6E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Gene3D G3DSA:1.10.8.500 206 257 3.0E-7 T 11-10-2018 ABE28_023660 7947205e7e688363f84491a6a90f0fc3 610 Gene3D G3DSA:3.30.450.20 32 185 6.8E-40 T 11-10-2018 ABE28_014990 a925c9449c4a6fd882bdc5be41db197b 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 1 55 1.0E-10 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family ABE28_014990 a925c9449c4a6fd882bdc5be41db197b 127 Pfam PF06686 Stage III sporulation protein AC/AD protein family 69 124 3.0E-18 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family ABE28_014990 a925c9449c4a6fd882bdc5be41db197b 127 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 25 125 1.0E-36 T 11-10-2018 IPR014211 Stage III sporulation protein AD ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 5.1E-24 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 SUPERFAMILY SSF56784 3 267 1.82E-66 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 2.7E-64 T 11-10-2018 ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 262 8.0E-59 T 11-10-2018 IPR000150 Cof family GO:0016787 ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 11-10-2018 ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 Gene3D G3DSA:3.30.1240.10 86 192 9.5E-63 T 11-10-2018 ABE28_005995 fa4eea562ba226dc9568beffeb154c62 272 Gene3D G3DSA:3.40.50.1000 7 261 9.5E-63 T 11-10-2018 IPR023214 HAD superfamily ABE28_008670 f45b205be092befba9e358533e669e5b 102 Gene3D G3DSA:3.40.50.2300 1 102 1.2E-38 T 11-10-2018 ABE28_008670 f45b205be092befba9e358533e669e5b 102 SUPERFAMILY SSF52794 1 100 6.54E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_008670 f45b205be092befba9e358533e669e5b 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.4E-22 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 15 319 78.77 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 61 68 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 16 156 1.3E-49 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 SUPERFAMILY SSF53671 14 318 3.8E-105 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 Gene3D G3DSA:3.40.50.1370 16 315 1.3E-122 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 Gene3D G3DSA:3.40.50.1370 159 314 1.3E-122 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 16 318 2.2E-131 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 235 245 1.3E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 92 105 1.3E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 297 308 1.3E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 59 73 1.3E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00102 Ornithine carbamoyltransferase signature 132 146 1.3E-29 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 162 315 2.2E-58 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 143 154 3.5E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 61 80 3.5E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 283 306 3.5E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_006050 bad44a1bf398a0422f659ad184e9adaa 319 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 271 280 3.5E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Gene3D G3DSA:2.40.240.60 358 429 2.4E-19 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 SUPERFAMILY SSF52540 160 334 1.91E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 322 1.1E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 359 428 8.2E-26 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 1.1E-143 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Pfam PF01926 50S ribosome-binding GTPase 160 283 5.8E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 SUPERFAMILY SSF82051 1 157 2.49E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Gene3D G3DSA:2.70.210.12 1 157 1.2E-60 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Pfam PF01018 GTP1/OBG 3 157 1.3E-59 T 11-10-2018 IPR006169 GTP1/OBG domain ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 7.8E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 SUPERFAMILY SSF102741 357 429 4.58E-23 T 11-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 PIRSF PIRSF002401 1 376 4.3E-143 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Hamap MF_01454 GTPase Obg [obg]. 1 329 47.721 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Gene3D G3DSA:3.40.50.300 158 341 1.3E-62 T 11-10-2018 ABE28_016320 eac03b78aee6ca6196728540cbb63e99 429 Pfam PF09269 Domain of unknown function (DUF1967) 359 427 1.1E-23 T 11-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 108 126 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 148 166 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 313 340 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 40 63 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 345 371 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PRINTS PR00067 Catalase signature 129 146 6.7E-64 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 ProSitePatterns PS00438 Catalase proximal active site signature. 63 79 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 Gene3D G3DSA:2.40.180.10 23 523 1.9E-216 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 358 366 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 Pfam PF06628 Catalase-related immune-responsive 442 503 6.3E-15 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 SUPERFAMILY SSF56634 16 505 1.31E-192 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 SMART SM01060 27 419 1.1E-247 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 PIRSF PIRSF038928 15 509 4.8E-176 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_022315 9afcec929c12fb13d15716cc437496d2 535 Pfam PF00199 Catalase 27 415 1.1E-170 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_020695 08cfa9004de7bdeda8304e0105d5b053 77 SUPERFAMILY SSF54593 8 69 4.44E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020695 08cfa9004de7bdeda8304e0105d5b053 77 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 44 6.4E-5 T 11-10-2018 IPR028973 PhnB-like ABE28_020695 08cfa9004de7bdeda8304e0105d5b053 77 Gene3D G3DSA:3.10.180.10 1 76 4.1E-12 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 Pfam PF00085 Thioredoxin 4 103 1.5E-31 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 PRINTS PR00421 Thioredoxin family signature 28 37 5.4E-9 T 11-10-2018 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 PRINTS PR00421 Thioredoxin family signature 20 28 5.4E-9 T 11-10-2018 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 PRINTS PR00421 Thioredoxin family signature 68 79 5.4E-9 T 11-10-2018 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 PIRSF PIRSF000077 1 104 1.3E-41 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 SUPERFAMILY SSF52833 3 103 1.14E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 Gene3D G3DSA:3.40.30.10 1 104 5.1E-36 T 11-10-2018 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABE28_016690 76cdb1cfb86d33092357535b984691ef 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 103 9.7E-39 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 5.3E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 PIRSF PIRSF016578 12 81 0.021 T 11-10-2018 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 PIRSF PIRSF016578 125 377 4.8E-16 T 11-10-2018 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 SUPERFAMILY SSF47203 227 380 6.77E-56 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Gene3D G3DSA:1.20.140.10 233 381 3.2E-56 T 11-10-2018 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 1.6E-50 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Gene3D G3DSA:2.40.110.10 121 232 8.7E-43 T 11-10-2018 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 11 118 3.8E-26 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 Gene3D G3DSA:1.10.540.10 1 120 3.7E-31 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_010780 380b21f707b4e21d8f9076b61883aa90 383 SUPERFAMILY SSF56645 1 242 1.31E-77 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 134 2.3E-42 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Gene3D G3DSA:3.40.120.10 3 155 1.8E-57 T 11-10-2018 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.191 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 SUPERFAMILY SSF55957 357 446 8.76E-27 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 2.7E-14 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 369 1.7E-37 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 2.5E-186 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Gene3D G3DSA:3.40.120.10 174 362 9.6E-73 T 11-10-2018 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Gene3D G3DSA:3.30.310.50 370 448 2.5E-29 T 11-10-2018 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 SUPERFAMILY SSF53738 158 256 3.49E-25 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 SUPERFAMILY SSF53738 257 365 2.83E-34 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Gene3D G3DSA:3.40.120.10 256 339 9.6E-73 T 11-10-2018 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 2.3E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 2.3E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 2.3E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 2.7E-18 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_000895 81337ba41963237c6ebe9aaf446432c4 449 SUPERFAMILY SSF53738 3 180 2.83E-45 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Gene3D G3DSA:3.40.50.300 518 746 1.1E-142 T 11-10-2018 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Gene3D G3DSA:2.30.30.940 604 684 1.1E-142 T 11-10-2018 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 SMART SM00382 358 521 0.0028 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Gene3D G3DSA:1.10.10.2220 200 298 1.5E-14 T 11-10-2018 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Pfam PF14490 Helix-hairpin-helix containing domain 158 249 5.1E-29 T 11-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Pfam PF13538 UvrD-like helicase C-terminal domain 683 731 2.7E-17 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 14 764 29.387 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Pfam PF13604 AAA domain 345 555 1.6E-52 T 11-10-2018 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 Gene3D G3DSA:3.40.50.300 337 753 1.1E-142 T 11-10-2018 ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 SUPERFAMILY SSF52540 342 738 8.45E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015775 a6a6de2eef3e518b77d0907f577ff52b 802 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 24 756 4.2E-257 T 11-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 ABE28_002215 3ef130eeb7a7dbde1e7fdac01b0693b6 279 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 8 210 4.9E-58 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_002215 3ef130eeb7a7dbde1e7fdac01b0693b6 279 Gene3D G3DSA:3.30.70.120 189 263 3.6E-22 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_002215 3ef130eeb7a7dbde1e7fdac01b0693b6 279 PIRSF PIRSF006483 1 278 8.4E-79 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_002215 3ef130eeb7a7dbde1e7fdac01b0693b6 279 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 1.1E-20 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_007530 789684b5d236ce6795ada22c34099674 433 SUPERFAMILY SSF53067 6 195 1.3E-56 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Gene3D G3DSA:3.30.1490.110 83 167 1.3E-109 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Gene3D G3DSA:3.30.420.40 10 364 1.3E-109 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Gene3D G3DSA:3.90.640.10 233 298 1.3E-109 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 PIRSF PIRSF003101 1 430 1.6E-141 T 11-10-2018 IPR020823 Cell division protein FtsA ABE28_007530 789684b5d236ce6795ada22c34099674 433 SUPERFAMILY SSF53067 197 368 2.13E-41 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Gene3D G3DSA:3.30.420.40 195 349 1.3E-109 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 432 29.797 T 11-10-2018 IPR020823 Cell division protein FtsA ABE28_007530 789684b5d236ce6795ada22c34099674 433 Pfam PF02491 SHS2 domain inserted in FTSA 82 160 7.0E-24 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Pfam PF14450 Cell division protein FtsA 9 176 2.0E-8 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 Pfam PF14450 Cell division protein FtsA 205 366 1.1E-23 T 11-10-2018 ABE28_007530 789684b5d236ce6795ada22c34099674 433 SMART SM00842 7 194 6.5E-87 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABE28_007530 789684b5d236ce6795ada22c34099674 433 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 2.0E-122 T 11-10-2018 IPR020823 Cell division protein FtsA ABE28_000530 da48e8983fbc63dd685d5e44d9fcfa06 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 11-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000530 da48e8983fbc63dd685d5e44d9fcfa06 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.991 T 11-10-2018 IPR022973 Ribosomal protein L10 ABE28_000530 da48e8983fbc63dd685d5e44d9fcfa06 166 Gene3D G3DSA:3.30.70.1730 5 133 3.5E-45 T 11-10-2018 ABE28_000530 da48e8983fbc63dd685d5e44d9fcfa06 166 Pfam PF00466 Ribosomal protein L10 6 101 4.0E-31 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 ABE28_000530 da48e8983fbc63dd685d5e44d9fcfa06 166 SUPERFAMILY SSF160369 4 160 7.19E-56 T 11-10-2018 ABE28_009985 206d84b66fc7429df86f5a2c633872c9 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 46 64 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_009985 206d84b66fc7429df86f5a2c633872c9 139 Pfam PF02082 Transcriptional regulator 2 79 2.2E-21 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_009985 206d84b66fc7429df86f5a2c633872c9 139 Gene3D G3DSA:1.10.10.10 1 138 2.6E-42 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009985 206d84b66fc7429df86f5a2c633872c9 139 SUPERFAMILY SSF46785 2 135 1.7E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014365 dbfd7368803a6c9e57d96dc997ebd14b 224 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 217 1.5E-83 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABE28_014365 dbfd7368803a6c9e57d96dc997ebd14b 224 Gene3D G3DSA:3.40.50.300 1 223 8.1E-84 T 11-10-2018 ABE28_014365 dbfd7368803a6c9e57d96dc997ebd14b 224 Pfam PF02224 Cytidylate kinase 7 220 3.5E-77 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABE28_014365 dbfd7368803a6c9e57d96dc997ebd14b 224 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 33.029 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 ABE28_014365 dbfd7368803a6c9e57d96dc997ebd14b 224 SUPERFAMILY SSF52540 6 220 5.82E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 Hamap MF_02040 Iron-sulfur cluster carrier protein. 100 348 33.225 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 Pfam PF01883 Iron-sulfur cluster assembly protein 4 62 8.4E-6 T 11-10-2018 IPR002744 MIP18 family-like ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 SUPERFAMILY SSF117916 2 79 1.31E-6 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 Gene3D G3DSA:3.40.50.300 105 324 9.7E-65 T 11-10-2018 ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 110 347 1.7E-83 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 ABE28_000780 a3dffba955947efc5e6abd1a54e8cbbc 352 SUPERFAMILY SSF52540 105 316 7.57E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 SUPERFAMILY SSF52172 1 171 3.42E-38 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 Gene3D G3DSA:3.40.50.2300 1 122 1.8E-35 T 11-10-2018 ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 139 210 1.4E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 Gene3D G3DSA:1.10.10.10 123 215 5.3E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 SMART SM00448 1 111 1.5E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 Pfam PF00072 Response regulator receiver domain 3 111 3.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_010290 df5ae19cecd09389d22391df7bd168a8 215 SMART SM00862 139 210 4.2E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 Gene3D G3DSA:2.40.10.240 64 162 1.2E-134 T 11-10-2018 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 46.796 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 SUPERFAMILY SSF111337 1 341 2.09E-139 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 2.5E-148 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 2.4E-141 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 ABE28_016210 fbeba0d8a6addf84023ef5d83b34f59e 342 Gene3D G3DSA:3.40.1780.10 14 341 1.2E-134 T 11-10-2018 ABE28_010740 c2529b1093f6f2fc3cb9d4db943b1bb1 162 PRINTS PR00502 NUDIX hydrolase family signature 48 63 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_010740 c2529b1093f6f2fc3cb9d4db943b1bb1 162 PRINTS PR00502 NUDIX hydrolase family signature 34 48 7.1E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_010740 c2529b1093f6f2fc3cb9d4db943b1bb1 162 SUPERFAMILY SSF55811 7 129 7.72E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_010740 c2529b1093f6f2fc3cb9d4db943b1bb1 162 Gene3D G3DSA:3.90.79.10 2 151 7.0E-29 T 11-10-2018 ABE28_010740 c2529b1093f6f2fc3cb9d4db943b1bb1 162 Pfam PF00293 NUDIX domain 15 108 3.5E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 PRINTS PR00132 Glycosyl hydrolase family 2 signature 494 509 2.8E-18 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 PRINTS PR00132 Glycosyl hydrolase family 2 signature 312 330 2.8E-18 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 PRINTS PR00132 Glycosyl hydrolase family 2 signature 281 295 2.8E-18 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 PRINTS PR00132 Glycosyl hydrolase family 2 signature 393 408 2.8E-18 T 11-10-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Gene3D G3DSA:2.60.120.260 1 180 2.8E-62 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 272 587 1.1E-81 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 SUPERFAMILY SSF51445 272 587 1.07E-85 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 322 347 - T 11-10-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 SUPERFAMILY SSF49785 1 180 1.16E-49 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 14 180 3.2E-23 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Gene3D G3DSA:3.20.20.80 272 594 3.8E-95 T 11-10-2018 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 393 407 - T 11-10-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Pfam PF00703 Glycosyl hydrolases family 2 188 270 4.0E-11 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 Gene3D G3DSA:2.60.40.10 181 271 2.6E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_003915 1ac2e53949f8ee0aa9f6d0e118924bcd 594 SUPERFAMILY SSF49303 182 271 2.73E-18 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ABE28_000220 f28635d1a6be6d785f6dfaa32d857218 98 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.431 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 ABE28_000220 f28635d1a6be6d785f6dfaa32d857218 98 Gene3D G3DSA:3.30.1120.40 1 97 1.4E-38 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 ABE28_000220 f28635d1a6be6d785f6dfaa32d857218 98 Pfam PF04026 SpoVG 1 81 1.8E-36 T 11-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 ABE28_000220 f28635d1a6be6d785f6dfaa32d857218 98 SUPERFAMILY SSF160537 1 89 1.05E-33 T 11-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 ABE28_012600 2284a871e6ba81f7c09dfeb8a36cf4e1 363 Gene3D G3DSA:3.40.50.2000 186 327 2.2E-107 T 11-10-2018 ABE28_012600 2284a871e6ba81f7c09dfeb8a36cf4e1 363 SUPERFAMILY SSF53756 2 358 5.71E-99 T 11-10-2018 ABE28_012600 2284a871e6ba81f7c09dfeb8a36cf4e1 363 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 24 356 2.0E-89 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_012600 2284a871e6ba81f7c09dfeb8a36cf4e1 363 Gene3D G3DSA:3.40.50.2000 3 185 2.2E-107 T 11-10-2018 ABE28_012600 2284a871e6ba81f7c09dfeb8a36cf4e1 363 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 335 7.4E-87 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABE28_021345 1943892910dc20affc6ae83c07471e72 166 SUPERFAMILY SSF54909 66 147 8.45E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_021345 1943892910dc20affc6ae83c07471e72 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 2.9E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_021345 1943892910dc20affc6ae83c07471e72 166 Gene3D G3DSA:3.30.70.920 56 153 5.9E-22 T 11-10-2018 ABE28_021345 1943892910dc20affc6ae83c07471e72 166 SUPERFAMILY SSF46785 3 61 1.11E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021345 1943892910dc20affc6ae83c07471e72 166 SMART SM00344 3 114 1.5E-4 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABE28_021345 1943892910dc20affc6ae83c07471e72 166 Gene3D G3DSA:1.10.10.10 1 55 2.8E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011165 0f0c68d810a9734ccfad909e46432263 337 SUPERFAMILY SSF53807 44 321 3.61E-51 T 11-10-2018 ABE28_011165 0f0c68d810a9734ccfad909e46432263 337 Pfam PF01497 Periplasmic binding protein 63 314 3.5E-37 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_011165 0f0c68d810a9734ccfad909e46432263 337 Gene3D G3DSA:3.40.50.12260 202 312 7.0E-69 T 11-10-2018 ABE28_011165 0f0c68d810a9734ccfad909e46432263 337 Gene3D G3DSA:3.40.50.1980 54 323 7.0E-69 T 11-10-2018 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Gene3D G3DSA:1.10.40.50 226 293 1.8E-23 T 11-10-2018 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 4.1E-88 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Pfam PF03193 RsgA GTPase 59 225 4.4E-62 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 39.603 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Gene3D G3DSA:2.40.50.140 1 61 2.6E-26 T 11-10-2018 ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Pfam PF16745 RsgA N-terminal domain 3 56 3.0E-23 T 11-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 SUPERFAMILY SSF50249 1 63 1.29E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 SUPERFAMILY SSF52540 64 290 1.08E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007725 9818b988de9851151dd4d5fbc0e20859 293 Gene3D G3DSA:3.40.50.300 62 225 3.2E-49 T 11-10-2018 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Gene3D G3DSA:1.10.1420.10 391 527 1.3E-102 T 11-10-2018 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Pfam PF05188 MutS domain II 125 242 1.5E-8 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SUPERFAMILY SSF48334 256 556 2.75E-89 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 681 697 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Pfam PF05190 MutS family domain IV 419 510 9.6E-31 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SMART SM00533 273 583 2.2E-116 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Pfam PF01624 MutS domain I 5 116 1.4E-44 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Gene3D G3DSA:3.40.50.300 560 866 6.5E-102 T 11-10-2018 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 PIRSF PIRSF037677 157 851 7.2E-133 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 PIRSF PIRSF037677 1 168 3.7E-30 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Gene3D G3DSA:3.40.1170.10 1 117 7.0E-47 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SUPERFAMILY SSF52540 559 791 3.94E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 870 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Pfam PF05192 MutS domain III 261 551 8.8E-45 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SUPERFAMILY SSF55271 2 110 3.27E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SUPERFAMILY SSF53150 114 269 2.75E-30 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Pfam PF00488 MutS domain V 604 790 4.0E-82 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 864 25.603 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 SMART SM00534 600 787 1.2E-117 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Gene3D G3DSA:3.30.420.110 124 250 1.7E-11 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 ABE28_008385 ecc261c951536e7af6598ba15887ec82 873 Gene3D G3DSA:1.10.1420.10 255 551 1.3E-102 T 11-10-2018 ABE28_020495 307f95d4402a41e902bf02de8363c03f 290 Pfam PF11738 Protein of unknown function (DUF3298) 194 276 3.6E-18 T 11-10-2018 IPR021729 Domain of unknown function DUF3298 ABE28_020495 307f95d4402a41e902bf02de8363c03f 290 Gene3D G3DSA:3.90.640.20 191 290 1.1E-37 T 11-10-2018 IPR037126 PdaC/RsiV-like superfamily ABE28_020495 307f95d4402a41e902bf02de8363c03f 290 Gene3D G3DSA:3.30.565.40 77 190 3.2E-26 T 11-10-2018 ABE28_009760 d5b6e800f3f373b5664d02a9a7807c32 208 SUPERFAMILY SSF142913 3 207 3.14E-81 T 11-10-2018 ABE28_009760 d5b6e800f3f373b5664d02a9a7807c32 208 PIRSF PIRSF021332 1 208 1.1E-86 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_009760 d5b6e800f3f373b5664d02a9a7807c32 208 Hamap MF_01851 UPF0637 protein . 5 205 39.62 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_009760 d5b6e800f3f373b5664d02a9a7807c32 208 Gene3D G3DSA:3.30.930.20 3 208 2.9E-80 T 11-10-2018 ABE28_009760 d5b6e800f3f373b5664d02a9a7807c32 208 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 9.7E-82 T 11-10-2018 IPR009403 Protein of unknown function UPF0637 ABE28_003540 544f176af7a91a09e076248f130f2458 240 Pfam PF00005 ABC transporter 17 165 8.5E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003540 544f176af7a91a09e076248f130f2458 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_003540 544f176af7a91a09e076248f130f2458 240 SUPERFAMILY SSF52540 1 235 3.96E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003540 544f176af7a91a09e076248f130f2458 240 SMART SM00382 26 221 4.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003540 544f176af7a91a09e076248f130f2458 240 Gene3D G3DSA:3.40.50.300 1 240 4.5E-80 T 11-10-2018 ABE28_003540 544f176af7a91a09e076248f130f2458 240 PIRSF PIRSF039085 1 240 2.0E-119 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_008360 a5eef4e97efb6acc81fa55bed236e101 288 Pfam PF12367 Pyruvate ferredoxin oxidoreductase beta subunit C terminal 199 264 8.9E-24 T 11-10-2018 IPR032686 Pyruvate ferredoxin oxidoreductase beta subunit, C-terminal ABE28_008360 a5eef4e97efb6acc81fa55bed236e101 288 Gene3D G3DSA:3.40.50.970 67 224 4.3E-28 T 11-10-2018 ABE28_008360 a5eef4e97efb6acc81fa55bed236e101 288 SUPERFAMILY SSF52518 11 261 4.27E-75 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_008360 a5eef4e97efb6acc81fa55bed236e101 288 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 48 195 1.5E-33 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_008360 a5eef4e97efb6acc81fa55bed236e101 288 TIGRFAM TIGR02177 PorB_KorB: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 14 270 2.1E-97 T 11-10-2018 IPR011896 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SMART SM00292 592 668 6.3E-11 T 11-10-2018 IPR001357 BRCT domain ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SUPERFAMILY SSF56091 5 314 1.11E-121 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 394 2.1E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 6 314 9.2E-131 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SMART SM00532 5 443 9.8E-284 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Pfam PF12826 Helix-hairpin-helix motif 505 567 1.1E-24 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:1.10.287.610 1 72 3.0E-25 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SUPERFAMILY SSF47781 399 579 1.33E-62 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:1.10.150.20 500 580 1.6E-27 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:2.40.50.140 315 387 3.4E-31 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:3.30.470.90 73 314 1.3E-101 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 662 2.5E-273 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:2.20.70.80 388 424 6.6E-11 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 PIRSF PIRSF001604 1 668 8.8E-259 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SMART SM00278 441 460 840.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SMART SM00278 475 494 5.6 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SMART SM00278 539 558 0.71 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 8.8E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 662 2.2E-10 T 11-10-2018 IPR001357 BRCT domain ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Hamap MF_01588 DNA ligase [ligA]. 4 666 53.377 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:1.10.150.20 427 499 4.5E-29 T 11-10-2018 ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SUPERFAMILY SSF50249 313 396 2.23E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 SUPERFAMILY SSF52113 593 667 2.99E-18 T 11-10-2018 IPR036420 BRCT domain superfamily ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site ABE28_001975 169a8235c3938ccbbec34e24f7bf4fa0 668 Gene3D G3DSA:3.40.50.10190 581 667 3.6E-24 T 11-10-2018 IPR036420 BRCT domain superfamily ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 Gene3D G3DSA:1.10.10.10 1 84 3.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 SUPERFAMILY SSF53697 99 277 1.07E-34 T 11-10-2018 ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 SUPERFAMILY SSF46689 4 77 5.02E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 Pfam PF01380 SIS domain 129 256 8.2E-14 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 Gene3D G3DSA:3.40.50.10490 95 282 5.8E-40 T 11-10-2018 ABE28_013660 c0dece2894f2424ba9c2bf0152d6e648 291 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 79 4.9E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 125 2.2E-17 T 11-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 Gene3D G3DSA:1.10.10.10 2 73 2.4E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 SUPERFAMILY SSF46785 3 62 2.32E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 Gene3D G3DSA:1.10.60.10 74 142 9.4E-31 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 1.7E-23 T 11-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 SMART SM00529 24 122 1.1E-35 T 11-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 SUPERFAMILY SSF47979 63 133 1.06E-17 T 11-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 ABE28_013480 dd5acabc102a2ea34e866ce3e60dc0e5 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 43.569 T 11-10-2018 IPR022897 HTH-type transcription regulator MntR ABE28_023665 000b010432d33d839b48863e60e617cf 236 Gene3D G3DSA:3.40.50.2300 1 129 1.3E-40 T 11-10-2018 ABE28_023665 000b010432d33d839b48863e60e617cf 236 Pfam PF00072 Response regulator receiver domain 5 114 3.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_023665 000b010432d33d839b48863e60e617cf 236 Gene3D G3DSA:1.10.10.10 130 236 1.3E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023665 000b010432d33d839b48863e60e617cf 236 SMART SM00448 3 113 2.5E-48 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_023665 000b010432d33d839b48863e60e617cf 236 SUPERFAMILY SSF46894 130 231 6.05E-32 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_023665 000b010432d33d839b48863e60e617cf 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 230 2.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_023665 000b010432d33d839b48863e60e617cf 236 SMART SM00862 154 230 1.2E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_023665 000b010432d33d839b48863e60e617cf 236 SUPERFAMILY SSF52172 2 123 8.25E-44 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_005700 e83c3c83551d3f86e9400d6e63516470 288 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 282 21.029 T 11-10-2018 IPR023059 Foldase protein PrsA GO:0003755 ABE28_005700 e83c3c83551d3f86e9400d6e63516470 288 Pfam PF13616 PPIC-type PPIASE domain 136 227 1.6E-28 T 11-10-2018 ABE28_005700 e83c3c83551d3f86e9400d6e63516470 288 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 165 186 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ABE28_005700 e83c3c83551d3f86e9400d6e63516470 288 SUPERFAMILY SSF54534 118 225 3.21E-34 T 11-10-2018 ABE28_005700 e83c3c83551d3f86e9400d6e63516470 288 Gene3D G3DSA:3.10.50.40 130 225 4.2E-38 T 11-10-2018 ABE28_000285 0b5063bba449709c97f7d3eb43141d3f 538 Pfam PF01943 Polysaccharide biosynthesis protein 13 312 5.6E-43 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_000285 0b5063bba449709c97f7d3eb43141d3f 538 PIRSF PIRSF038958 7 528 8.3E-81 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_000285 0b5063bba449709c97f7d3eb43141d3f 538 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 364 510 2.1E-21 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_006540 a6ab5f0c53469cb57ecb79ccd284228a 99 ProDom PD068665 YXCD 1 92 1.0E-26 T 11-10-2018 IPR020516 Uncharacterised protein family YxcD ABE28_006540 a6ab5f0c53469cb57ecb79ccd284228a 99 Pfam PF10850 Protein of unknown function (DUF2653) 1 87 5.7E-37 T 11-10-2018 IPR020516 Uncharacterised protein family YxcD ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 Pfam PF00561 alpha/beta hydrolase fold 24 263 2.6E-25 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 Gene3D G3DSA:3.40.50.1820 1 279 2.7E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 SUPERFAMILY SSF53474 3 276 3.07E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 98 111 5.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 224 238 5.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_018530 45a0b36dbb277eeb1b05084a9f841db0 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 112 125 5.3E-9 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020225 958f303814e3e25f9823f5191d7e0657 140 Gene3D G3DSA:1.20.1550.10 2 109 1.7E-9 T 11-10-2018 IPR023380 DsbB-like superfamily ABE28_020225 958f303814e3e25f9823f5191d7e0657 140 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 2 135 21.369 T 11-10-2018 IPR012187 Disulphide bond formation protein BdbC ABE28_020225 958f303814e3e25f9823f5191d7e0657 140 PIRSF PIRSF036659 1 137 2.7E-51 T 11-10-2018 IPR012187 Disulphide bond formation protein BdbC ABE28_020225 958f303814e3e25f9823f5191d7e0657 140 SUPERFAMILY SSF158442 5 129 1.83E-29 T 11-10-2018 IPR023380 DsbB-like superfamily ABE28_020225 958f303814e3e25f9823f5191d7e0657 140 Pfam PF02600 Disulfide bond formation protein DsbB 5 127 6.1E-10 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 7.2E-175 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.17 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 SUPERFAMILY SSF55205 2 418 2.09E-140 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 407 3.5E-113 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 Gene3D G3DSA:3.65.10.10 6 415 1.3E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_022755 a928f44d040e93fbc5c6ab8033843fd4 433 Gene3D G3DSA:3.65.10.10 20 231 1.3E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 SUPERFAMILY SSF51735 1 147 1.58E-20 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 Gene3D G3DSA:3.40.50.720 1 150 1.2E-29 T 11-10-2018 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 1 87 4.2E-14 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 210 232 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 Gene3D G3DSA:1.10.3730.10 151 252 2.5E-14 T 11-10-2018 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 PIRSF PIRSF000193 1 256 1.5E-62 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 SUPERFAMILY SSF48179 150 252 6.63E-18 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_015580 01fcee36449a2e029de6e54d61d51262 265 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 154 250 1.6E-15 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 Pfam PF00128 Alpha amylase, catalytic domain 82 337 3.0E-23 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 SUPERFAMILY SSF51445 34 486 2.07E-83 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 PIRSF PIRSF003059 1 559 8.7E-209 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 Gene3D G3DSA:3.20.20.80 50 458 2.1E-161 T 11-10-2018 ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 SUPERFAMILY SSF51011 494 558 3.36E-6 T 11-10-2018 ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 Gene3D G3DSA:3.90.400.10 132 206 2.1E-161 T 11-10-2018 ABE28_006435 c19d450f291df65edce9ebb831b5567c 561 SMART SM00642 51 476 1.2E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_018310 aeb7ed5443ad6de3275534e3fcd6a208 183 Gene3D G3DSA:3.40.50.360 1 144 6.4E-26 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_018310 aeb7ed5443ad6de3275534e3fcd6a208 183 SUPERFAMILY SSF52218 1 138 5.14E-26 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_018310 aeb7ed5443ad6de3275534e3fcd6a208 183 Pfam PF00258 Flavodoxin 5 130 1.1E-16 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 362 8.3E-122 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 Pfam PF07687 Peptidase dimerisation domain 180 275 1.1E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 SUPERFAMILY SSF55031 177 289 6.54E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 PIRSF PIRSF005962 1 378 9.4E-126 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 Pfam PF01546 Peptidase family M20/M25/M40 67 371 1.1E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 SUPERFAMILY SSF53187 4 377 3.14E-82 T 11-10-2018 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 Gene3D G3DSA:3.40.630.10 9 359 4.8E-136 T 11-10-2018 ABE28_003030 70d3c7fa7b3c60ad14030b9ac54b1634 380 Gene3D G3DSA:3.30.70.360 175 289 4.8E-136 T 11-10-2018 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 Gene3D G3DSA:1.10.275.10 9 142 5.3E-57 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 Gene3D G3DSA:1.10.40.30 411 462 2.5E-18 T 11-10-2018 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 Gene3D G3DSA:1.20.200.10 143 410 1.6E-113 T 11-10-2018 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 Pfam PF00206 Lyase 16 345 7.6E-109 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 2.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 2.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 2.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 2.9E-32 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 3.3E-6 T 11-10-2018 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 3.3E-6 T 11-10-2018 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 9 470 4.3E-236 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 SUPERFAMILY SSF48557 8 465 1.04E-145 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 Pfam PF10415 Fumarase C C-terminus 412 464 2.5E-16 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_019375 1e741db57f66947edf39a0c4e05b648a 476 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 2.7E-47 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 Gene3D G3DSA:3.40.50.720 1 170 7.9E-73 T 11-10-2018 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 SUPERFAMILY SSF51735 4 168 4.64E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 5.5E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 Pfam PF02056 Family 4 glycosyl hydrolase 6 186 1.9E-73 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 SUPERFAMILY SSF56327 173 438 2.09E-91 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_008685 7714e1d779941fad98dafa51728b6f18 447 Gene3D G3DSA:3.90.110.10 171 445 4.2E-99 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_003665 7453257e9e74485a83eb1af9dfc338a2 306 SUPERFAMILY SSF103481 191 282 5.49E-10 T 11-10-2018 ABE28_003665 7453257e9e74485a83eb1af9dfc338a2 306 SUPERFAMILY SSF103481 43 136 4.05E-6 T 11-10-2018 ABE28_003665 7453257e9e74485a83eb1af9dfc338a2 306 Pfam PF00892 EamA-like transporter family 7 136 3.4E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_003665 7453257e9e74485a83eb1af9dfc338a2 306 Pfam PF00892 EamA-like transporter family 150 282 5.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 Gene3D G3DSA:1.10.357.10 6 188 1.3E-53 T 11-10-2018 ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 SUPERFAMILY SSF46689 7 75 3.69E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 Pfam PF14278 Transcriptional regulator C-terminal region 95 170 5.1E-21 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 9.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 9.2E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004520 339e39a4fd9d8c8c6156a15f5028ef9e 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 61 1.3E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_023840 ec403637778aac6bc0794504a81121ba 357 SMART SM00471 136 272 7.3E-4 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_023840 ec403637778aac6bc0794504a81121ba 357 SUPERFAMILY SSF109604 131 300 4.08E-21 T 11-10-2018 ABE28_023840 ec403637778aac6bc0794504a81121ba 357 Gene3D G3DSA:1.10.3210.10 5 303 1.2E-58 T 11-10-2018 ABE28_023840 ec403637778aac6bc0794504a81121ba 357 Pfam PF13487 HD domain 192 254 5.1E-12 T 11-10-2018 ABE28_003350 2dc8c5c42698e38b22562eda78ce106c 255 SUPERFAMILY SSF52540 4 224 3.5E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003350 2dc8c5c42698e38b22562eda78ce106c 255 Gene3D G3DSA:3.40.50.300 2 247 1.8E-65 T 11-10-2018 ABE28_003350 2dc8c5c42698e38b22562eda78ce106c 255 Pfam PF00005 ABC transporter 24 172 3.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003350 2dc8c5c42698e38b22562eda78ce106c 255 SMART SM00382 33 221 8.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 SUPERFAMILY SSF52540 36 322 1.78E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 239 303 7.8E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 SMART SM00382 37 245 2.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.8E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 Pfam PF00005 ABC transporter 29 187 2.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_019455 07a2ef83a7ab6d7705330e6ae5c98ac2 341 Gene3D G3DSA:3.40.50.300 6 338 7.7E-104 T 11-10-2018 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 Gene3D G3DSA:3.40.190.10 96 177 2.4E-76 T 11-10-2018 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 144 165 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 Pfam PF01634 ATP phosphoribosyltransferase 55 205 1.8E-47 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 5 209 54.814 T 11-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 185 8.7E-59 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 SUPERFAMILY SSF53850 3 207 1.98E-63 T 11-10-2018 ABE28_022245 6bf7a989d5e8f717a20e13c8593c4a5c 209 Gene3D G3DSA:3.40.190.10 7 200 2.4E-76 T 11-10-2018 ABE28_008130 0a343825570967668dc378f11d6bd497 422 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 2 421 5.1E-111 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 ABE28_008130 0a343825570967668dc378f11d6bd497 422 SUPERFAMILY SSF50156 176 269 5.26E-17 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_008130 0a343825570967668dc378f11d6bd497 422 Pfam PF13180 PDZ domain 210 268 9.9E-8 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_008130 0a343825570967668dc378f11d6bd497 422 Gene3D G3DSA:2.30.42.10 204 289 8.0E-22 T 11-10-2018 ABE28_008130 0a343825570967668dc378f11d6bd497 422 Pfam PF02163 Peptidase family M50 9 408 1.2E-77 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ABE28_008130 0a343825570967668dc378f11d6bd497 422 SMART SM00228 187 261 1.1E-4 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 SUPERFAMILY SSF54637 74 183 2.26E-24 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 SUPERFAMILY SSF46785 5 51 7.94E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 Gene3D G3DSA:1.10.10.10 1 60 2.8E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 Gene3D G3DSA:3.10.129.10 68 185 1.4E-38 T 11-10-2018 ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 SMART SM00420 8 60 0.0064 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 Hamap MF_01814 Transcription factor FapR [fapR]. 1 185 36.928 T 11-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 PIRSF PIRSF037733 1 185 2.9E-83 T 11-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 ABE28_007775 ccb8a1249b5bfec1438aa233737132a0 185 Pfam PF08220 DeoR-like helix-turn-helix domain 8 50 2.4E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_006930 b101124c2f24040a18515efed30d334c 564 Gene3D G3DSA:1.10.1370.30 1 564 3.0E-216 T 11-10-2018 ABE28_006930 b101124c2f24040a18515efed30d334c 564 SUPERFAMILY SSF55486 36 559 5.25E-123 T 11-10-2018 ABE28_006930 b101124c2f24040a18515efed30d334c 564 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 13 560 1.3E-220 T 11-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related ABE28_000695 c23e944e6946a416af836417159bb0b2 72 SMART SM00316 4 72 1.2E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_000695 c23e944e6946a416af836417159bb0b2 72 SUPERFAMILY SSF50249 1 71 1.0E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000695 c23e944e6946a416af836417159bb0b2 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.162 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABE28_000695 c23e944e6946a416af836417159bb0b2 72 Gene3D G3DSA:2.40.50.140 1 72 3.3E-38 T 11-10-2018 ABE28_000695 c23e944e6946a416af836417159bb0b2 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 3.0E-39 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 ABE28_000695 c23e944e6946a416af836417159bb0b2 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 5.6E-29 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 SUPERFAMILY SSF46689 370 461 1.77E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Pfam PF02954 Bacterial regulatory protein, Fis family 420 459 1.5E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 SMART SM00382 176 320 6.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Gene3D G3DSA:1.10.10.60 408 461 4.3E-17 T 11-10-2018 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 SUPERFAMILY SSF52540 156 401 7.69E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 370 379 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Gene3D G3DSA:1.10.8.60 328 407 8.1E-27 T 11-10-2018 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 82 2.1E-6 T 11-10-2018 IPR000014 PAS domain ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 9.4E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 461 9.4E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 SUPERFAMILY SSF55785 17 112 8.68E-11 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 180 193 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Gene3D G3DSA:3.40.50.300 141 327 2.2E-65 T 11-10-2018 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Gene3D G3DSA:3.30.450.20 14 115 4.2E-13 T 11-10-2018 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 243 258 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018510 4c4ec91c31e105634a2a1294a355e6ce 461 Pfam PF00158 Sigma-54 interaction domain 156 323 3.0E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 Gene3D G3DSA:3.40.50.1000 20 253 3.4E-63 T 11-10-2018 IPR023214 HAD superfamily ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 ProSitePatterns PS01229 Hypothetical cof family signature 2. 207 229 - T 11-10-2018 ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 Pfam PF08282 haloacid dehalogenase-like hydrolase 22 253 5.8E-57 T 11-10-2018 ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 SUPERFAMILY SSF56784 13 258 2.1E-68 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 21 226 2.6E-27 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 ProSitePatterns PS01228 Hypothetical cof family signature 1. 21 32 - T 11-10-2018 ABE28_012430 170ff311abdba0d7f2ff11bef79369a3 260 Gene3D G3DSA:3.30.1240.10 99 182 3.4E-63 T 11-10-2018 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.522 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 PIRSF PIRSF002181 1 143 2.5E-51 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 8.4E-64 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 SUPERFAMILY SSF52161 5 143 2.62E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 Gene3D G3DSA:3.90.1180.10 1 143 2.3E-62 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 ABE28_000745 35ac38ea515bb47064f125ab2c55e153 145 Pfam PF00572 Ribosomal protein L13 15 139 9.7E-57 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 ABE28_022050 22bc47393059432f63f6918509807daf 249 PIRSF PIRSF006648 1 249 9.9E-66 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 ABE28_022050 22bc47393059432f63f6918509807daf 249 Pfam PF01061 ABC-2 type transporter 5 214 4.8E-22 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ABE28_011660 10c68a58a1066fe89fa629554a037e43 151 Pfam PF13646 HEAT repeats 20 82 1.9E-6 T 11-10-2018 ABE28_011660 10c68a58a1066fe89fa629554a037e43 151 SUPERFAMILY SSF48371 14 104 5.76E-5 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Gene3D G3DSA:3.40.1190.10 87 317 3.2E-69 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Gene3D G3DSA:3.90.190.20 318 460 1.8E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 SUPERFAMILY SSF53244 319 458 6.18E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 459 34.619 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Pfam PF01225 Mur ligase family, catalytic domain 27 101 1.1E-14 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 SUPERFAMILY SSF53623 105 315 3.4E-56 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Pfam PF08245 Mur ligase middle domain 111 299 1.4E-49 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Gene3D G3DSA:3.40.1390.10 2 85 7.8E-23 T 11-10-2018 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 458 1.3E-139 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 Pfam PF02875 Mur ligase family, glutamate ligase domain 321 398 3.2E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_001345 44817f28bd4adf7527f632dd602e4d85 460 SUPERFAMILY SSF63418 6 102 2.09E-24 T 11-10-2018 IPR035911 MurE/MurF, N-terminal ABE28_020020 d466cf60fb70df7fa2b8d0f3ece8ad2a 349 SUPERFAMILY SSF74650 10 345 2.39E-106 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABE28_020020 d466cf60fb70df7fa2b8d0f3ece8ad2a 349 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 175 184 - T 11-10-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ABE28_020020 d466cf60fb70df7fa2b8d0f3ece8ad2a 349 PIRSF PIRSF005096 1 348 1.9E-118 T 11-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 ABE28_020020 d466cf60fb70df7fa2b8d0f3ece8ad2a 349 Pfam PF01263 Aldose 1-epimerase 20 342 3.2E-85 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ABE28_020020 d466cf60fb70df7fa2b8d0f3ece8ad2a 349 Gene3D G3DSA:2.70.98.10 9 347 1.8E-112 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 Gene3D G3DSA:3.40.190.10 139 330 2.5E-122 T 11-10-2018 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 SUPERFAMILY SSF53850 35 353 1.42E-98 T 11-10-2018 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 Pfam PF13416 Bacterial extracellular solute-binding protein 50 320 9.2E-42 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 Gene3D G3DSA:3.40.190.10 39 322 2.5E-122 T 11-10-2018 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PIRSF PIRSF019574 1 356 8.9E-131 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 83 97 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 99 112 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 130 146 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 156 170 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 174 193 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 56 77 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 255 274 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 300 326 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_001075 6e793072b22a56b16c38bb1f081a86ba 357 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 40 56 7.9E-57 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_007185 c9af44fd0584ba51472258d11497dd5c 319 SUPERFAMILY SSF51412 2 314 1.14E-62 T 11-10-2018 ABE28_007185 c9af44fd0584ba51472258d11497dd5c 319 Pfam PF03060 Nitronate monooxygenase 5 75 4.0E-17 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_007185 c9af44fd0584ba51472258d11497dd5c 319 Pfam PF03060 Nitronate monooxygenase 78 307 1.4E-43 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_007185 c9af44fd0584ba51472258d11497dd5c 319 Gene3D G3DSA:3.20.20.70 2 318 1.9E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_019320 6a5848d7cbfb338b8535d639504c6401 412 Gene3D G3DSA:1.20.1250.20 7 191 2.3E-44 T 11-10-2018 ABE28_019320 6a5848d7cbfb338b8535d639504c6401 412 SUPERFAMILY SSF103473 7 401 9.81E-86 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019320 6a5848d7cbfb338b8535d639504c6401 412 Gene3D G3DSA:1.20.1250.20 204 407 1.4E-34 T 11-10-2018 ABE28_019320 6a5848d7cbfb338b8535d639504c6401 412 Pfam PF07690 Major Facilitator Superfamily 18 359 3.8E-60 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 SUPERFAMILY SSF103473 200 496 3.14E-32 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 Gene3D G3DSA:1.20.1250.20 261 500 6.8E-19 T 11-10-2018 ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 Pfam PF07690 Major Facilitator Superfamily 14 404 7.2E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 Gene3D G3DSA:1.20.1720.10 11 217 1.1E-54 T 11-10-2018 ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 SUPERFAMILY SSF103473 1 194 1.01E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001215 8641bb759e4bf0acecd932bd076945d4 501 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 486 1.9E-83 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_015710 7b20ddf4e9a5d56c6e342aa772b1f040 423 Pfam PF16325 Peptidase family U32 C-terminal domain 340 420 1.0E-22 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal ABE28_015710 7b20ddf4e9a5d56c6e342aa772b1f040 423 Pfam PF01136 Peptidase family U32 94 322 1.0E-86 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABE28_015710 7b20ddf4e9a5d56c6e342aa772b1f040 423 Gene3D G3DSA:2.40.30.10 335 423 1.1E-35 T 11-10-2018 ABE28_015710 7b20ddf4e9a5d56c6e342aa772b1f040 423 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABE28_024170 46ece540604c07b80cca20d82d923edc 233 Gene3D G3DSA:3.40.50.150 24 217 3.3E-39 T 11-10-2018 ABE28_024170 46ece540604c07b80cca20d82d923edc 233 Pfam PF13649 Methyltransferase domain 63 157 2.2E-20 T 11-10-2018 ABE28_024170 46ece540604c07b80cca20d82d923edc 233 SUPERFAMILY SSF53335 24 227 1.22E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_004875 6fa5f87eeb9205ed1b42817f34750424 107 Gene3D G3DSA:3.10.450.390 19 105 2.0E-12 T 11-10-2018 ABE28_004875 6fa5f87eeb9205ed1b42817f34750424 107 Pfam PF13028 Protein of unknown function (DUF3889) 15 103 1.8E-20 T 11-10-2018 IPR024987 Protein of unknown function DUF3889 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 Gene3D G3DSA:1.10.3860.10 18 459 5.4E-102 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 Pfam PF00375 Sodium:dicarboxylate symporter family 30 440 1.1E-96 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 368 387 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 262 281 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 395 415 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.6E-18 T 11-10-2018 ABE28_018185 1f10d52f892739a0f2292a1948e3d02e 462 SUPERFAMILY SSF118215 29 440 4.71E-91 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 SUPERFAMILY SSF100950 65 296 1.67E-38 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 Pfam PF11870 Domain of unknown function (DUF3390) 385 471 2.1E-20 T 11-10-2018 IPR024569 4Fe-4S binding protein, C-terminal ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 SUPERFAMILY SSF46548 286 393 2.62E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 66.45 T 11-10-2018 IPR022825 Lactate utilization protein B ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 Pfam PF13183 4Fe-4S dicluster domain 311 377 4.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 3.6E-206 T 11-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 Gene3D G3DSA:3.40.50.10420 136 295 3.2E-14 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_016820 3c730bb2ea4d75ff0ea2250bc06ced3f 476 Pfam PF02589 LUD domain 71 295 3.6E-54 T 11-10-2018 IPR003741 LUD domain ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Pfam PF11638 DnaA N-terminal domain 6 65 7.6E-17 T 11-10-2018 IPR024633 DnaA N-terminal domain ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 SUPERFAMILY SSF48295 344 447 1.57E-36 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 SMART SM00382 145 273 6.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Gene3D G3DSA:3.40.50.300 94 277 5.9E-55 T 11-10-2018 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Gene3D G3DSA:1.10.1750.10 348 448 1.0E-35 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Pfam PF00308 Bacterial dnaA protein 113 329 1.6E-106 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 166 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 178 192 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 244 271 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 407 426 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 210 224 6.5E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Gene3D G3DSA:1.10.8.60 279 347 3.3E-30 T 11-10-2018 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 SMART SM00760 357 426 1.9E-41 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Gene3D G3DSA:3.30.300.180 1 81 3.6E-30 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 ProSitePatterns PS01008 DnaA protein signature. 407 426 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 448 34.913 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 360 426 2.2E-30 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 SUPERFAMILY SSF52540 114 325 1.25E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023805 871ea63301fbdb2b810bf88dd8f7a9b2 449 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 447 3.8E-187 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PRINTS PR00958 Homoserine kinase signature 169 186 2.5E-38 T 11-10-2018 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PRINTS PR00958 Homoserine kinase signature 249 264 2.5E-38 T 11-10-2018 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PRINTS PR00958 Homoserine kinase signature 131 144 2.5E-38 T 11-10-2018 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PRINTS PR00958 Homoserine kinase signature 15 30 2.5E-38 T 11-10-2018 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PRINTS PR00958 Homoserine kinase signature 97 112 2.5E-38 T 11-10-2018 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 Gene3D G3DSA:3.30.70.890 166 293 4.8E-36 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 SUPERFAMILY SSF54211 4 162 1.06E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 28.955 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 Gene3D G3DSA:3.30.230.10 6 165 2.0E-38 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 PIRSF PIRSF000676 4 300 9.0E-85 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 SUPERFAMILY SSF55060 165 288 4.52E-33 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 TIGRFAM TIGR00191 thrB: homoserine kinase 8 297 3.8E-81 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 Pfam PF00288 GHMP kinases N terminal domain 83 144 1.5E-10 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ABE28_021610 11b6b644873e695dc1fcee4c79b78d5e 312 Pfam PF08544 GHMP kinases C terminal 205 282 1.0E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ABE28_019270 27e4ba3481b373b2e366bcbedc142b62 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 82 4.2E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_019270 27e4ba3481b373b2e366bcbedc142b62 88 SUPERFAMILY SSF52794 1 85 5.75E-18 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_019270 27e4ba3481b373b2e366bcbedc142b62 88 Gene3D G3DSA:3.40.50.2300 1 88 7.1E-19 T 11-10-2018 ABE28_023145 0a578c6061ef76c03dd43cdbab187654 339 SUPERFAMILY SSF69572 3 327 2.09E-80 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABE28_023145 0a578c6061ef76c03dd43cdbab187654 339 Gene3D G3DSA:3.40.50.720 2 250 4.1E-72 T 11-10-2018 ABE28_023145 0a578c6061ef76c03dd43cdbab187654 339 Pfam PF00899 ThiF family 6 241 1.4E-56 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABE28_017960 5be0f5204579249ffa9f377d6e554728 216 Pfam PF01569 PAP2 superfamily 89 206 2.4E-21 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_017960 5be0f5204579249ffa9f377d6e554728 216 SMART SM00014 89 201 5.6E-31 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_017960 5be0f5204579249ffa9f377d6e554728 216 SUPERFAMILY SSF48317 7 211 9.94E-41 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_017960 5be0f5204579249ffa9f377d6e554728 216 Gene3D G3DSA:1.20.144.10 121 216 2.0E-28 T 11-10-2018 ABE28_017960 5be0f5204579249ffa9f377d6e554728 216 Gene3D G3DSA:1.20.144.10 3 120 1.8E-10 T 11-10-2018 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 Gene3D G3DSA:3.40.50.1100 59 158 1.1E-117 T 11-10-2018 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 SUPERFAMILY SSF53686 13 366 3.93E-101 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 Gene3D G3DSA:3.40.1020.10 326 422 9.4E-9 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 15 422 2.5E-189 T 11-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 SUPERFAMILY SSF55021 340 415 6.87E-10 T 11-10-2018 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 5.3E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 Gene3D G3DSA:3.40.50.1100 24 325 1.1E-117 T 11-10-2018 ABE28_013360 d83f036a2d089bf84eebcb3a691415b5 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 421 8.6E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SUPERFAMILY SSF52540 6 394 3.68E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 4.0E-201 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Gene3D G3DSA:1.10.1200.230 623 704 2.2E-286 T 11-10-2018 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Pfam PF07517 SecA DEAD-like domain 6 382 3.2E-114 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Gene3D G3DSA:3.40.50.300 15 396 2.2E-286 T 11-10-2018 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Pfam PF01043 SecA preprotein cross-linking domain 232 338 4.9E-34 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SUPERFAMILY SSF81767 230 348 1.11E-39 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SMART SM00957 5 382 4.5E-225 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Pfam PF07516 SecA Wing and Scaffold domain 575 774 1.4E-30 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SUPERFAMILY SSF52540 397 564 1.49E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 780 17.458 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SUPERFAMILY SSF81886 574 784 1.7E-34 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Gene3D G3DSA:3.90.1440.10 227 348 2.2E-286 T 11-10-2018 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SMART SM00958 226 338 4.1E-49 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 356 373 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 61 85 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 99 113 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 168 188 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 319 341 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 393 406 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 PRINTS PR00906 SecA protein signature 115 125 8.5E-62 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 SMART SM00490 443 530 0.0092 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Pfam PF00271 Helicase conserved C-terminal domain 414 530 6.1E-6 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Gene3D G3DSA:3.40.50.300 397 570 2.2E-286 T 11-10-2018 ABE28_022590 e7358e80caa2765961364e6f499b04c4 792 Gene3D G3DSA:1.10.3060.10 571 771 2.2E-286 T 11-10-2018 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.78 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 SUPERFAMILY SSF46561 1 63 2.88E-24 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 9.4E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 Pfam PF00831 Ribosomal L29 protein 4 60 3.8E-26 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000625 8d83255c25c933f6afb4339a772ab961 67 Gene3D G3DSA:1.10.287.310 1 66 1.7E-30 T 11-10-2018 ABE28_005395 456460b96e724697dc84aad4c2419119 459 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_005395 456460b96e724697dc84aad4c2419119 459 PIRSF PIRSF006060 2 456 2.8E-73 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_005395 456460b96e724697dc84aad4c2419119 459 Gene3D G3DSA:1.20.1740.10 8 455 1.6E-56 T 11-10-2018 ABE28_005395 456460b96e724697dc84aad4c2419119 459 Pfam PF00324 Amino acid permease 16 416 4.6E-89 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Gene3D G3DSA:3.30.160.40 220 304 4.5E-26 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 SUPERFAMILY SSF53850 2 215 5.27E-80 T 11-10-2018 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 292 1.8E-17 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Gene3D G3DSA:3.40.190.10 4 209 7.7E-85 T 11-10-2018 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Gene3D G3DSA:3.40.190.10 101 201 7.7E-85 T 11-10-2018 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 3.9E-80 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 2.3E-48 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 2.3E-48 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 2.3E-48 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 2.3E-48 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 2.3E-48 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 38.138 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 PIRSF PIRSF001438 1 310 3.2E-120 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 SUPERFAMILY SSF54782 221 308 1.14E-19 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016460 9ead1644280e7e55721de181a7c91509 310 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 1.5E-108 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 Gene3D G3DSA:3.30.870.10 220 394 2.1E-29 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 SMART SM00155 138 165 7.1E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 SMART SM00155 310 337 5.8E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 Gene3D G3DSA:3.30.870.10 35 219 1.1E-42 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 SUPERFAMILY SSF56024 32 217 2.07E-41 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 27 397 9.3E-97 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 PIRSF PIRSF000850 206 297 5.5E-6 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 PIRSF PIRSF000850 303 380 2.5 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 PIRSF PIRSF000850 17 152 0.11 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 SUPERFAMILY SSF56024 190 371 1.75E-36 T 11-10-2018 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 Pfam PF13091 PLD-like domain 237 361 4.0E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_023030 a3feb0936a4cdb9ec3f954e19a0a9295 397 Pfam PF13091 PLD-like domain 56 198 9.4E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_023235 6665437378fdfe2049246cf8ef0b7948 205 PIRSF PIRSF000709 3 163 2.1E-5 T 11-10-2018 ABE28_023235 6665437378fdfe2049246cf8ef0b7948 205 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 7 165 2.1E-32 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_023235 6665437378fdfe2049246cf8ef0b7948 205 Gene3D G3DSA:3.40.50.1240 5 186 3.5E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_023235 6665437378fdfe2049246cf8ef0b7948 205 SMART SM00855 6 153 3.4E-18 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_023235 6665437378fdfe2049246cf8ef0b7948 205 SUPERFAMILY SSF53254 7 181 2.36E-37 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 429 439 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 464 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 411 425 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 482 1.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Gene3D G3DSA:3.30.565.10 332 485 2.9E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SMART SM00304 187 239 1.5E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Pfam PF00672 HAMP domain 187 236 1.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SUPERFAMILY SSF55874 317 483 8.38E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SMART SM00387 372 485 2.7E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 326 7.4E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Gene3D G3DSA:1.20.1480.50 148 246 2.3E-12 T 11-10-2018 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SUPERFAMILY SSF158472 187 236 3.14E-10 T 11-10-2018 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SUPERFAMILY SSF47384 248 327 9.02E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 484 1.3E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 Gene3D G3DSA:1.10.287.130 254 328 4.2E-15 T 11-10-2018 ABE28_009570 4b7dcb71d1b5cb4a80480557fa7a9ab0 486 SMART SM00388 261 327 3.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002665 3367ac023418d5b523f242e36a550117 335 Gene3D G3DSA:3.30.420.40 7 319 7.5E-124 T 11-10-2018 ABE28_002665 3367ac023418d5b523f242e36a550117 335 Gene3D G3DSA:3.90.640.10 181 254 7.5E-124 T 11-10-2018 ABE28_002665 3367ac023418d5b523f242e36a550117 335 SUPERFAMILY SSF53067 6 143 2.92E-41 T 11-10-2018 ABE28_002665 3367ac023418d5b523f242e36a550117 335 Pfam PF06723 MreB/Mbl protein 5 331 1.1E-142 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 331 2.7E-136 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 SUPERFAMILY SSF53067 144 329 3.28E-49 T 11-10-2018 ABE28_002665 3367ac023418d5b523f242e36a550117 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.4E-54 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.4E-54 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.4E-54 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.4E-54 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.4E-54 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_002665 3367ac023418d5b523f242e36a550117 335 Gene3D G3DSA:3.30.420.40 149 312 7.5E-124 T 11-10-2018 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 SMART SM00387 471 579 2.4E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 SMART SM00065 237 372 5.9E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Gene3D G3DSA:3.30.450.40 239 372 5.8E-7 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 477 578 3.7E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Gene3D G3DSA:1.10.1760.20 73 220 2.3E-5 T 11-10-2018 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 SUPERFAMILY SSF55874 439 577 2.62E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Pfam PF06580 Histidine kinase 377 455 1.6E-24 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Gene3D G3DSA:3.30.565.10 440 584 4.2E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 SUPERFAMILY SSF55781 242 366 1.03E-8 T 11-10-2018 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Pfam PF13492 GAF domain 243 363 3.1E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_019305 496fbeb7eda89e90614fd2d017794af6 594 Pfam PF07694 5TMR of 5TMR-LYT 26 206 4.8E-56 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 ABE28_021850 fea901a42b31ba327148236b0e26ca28 293 Pfam PF00950 ABC 3 transport family 5 272 6.3E-52 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ABE28_021850 fea901a42b31ba327148236b0e26ca28 293 Gene3D G3DSA:1.10.3470.10 31 275 2.7E-6 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021850 fea901a42b31ba327148236b0e26ca28 293 SUPERFAMILY SSF81345 7 266 6.93E-31 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 SUPERFAMILY SSF46785 167 256 2.06E-42 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 Pfam PF06018 CodY GAF-like domain 2 178 1.5E-80 T 11-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 4.6E-124 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 9.4E-38 T 11-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 148.838 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 Gene3D G3DSA:3.30.450.40 1 159 2.7E-69 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 Gene3D G3DSA:1.10.10.10 160 259 2.9E-47 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007925 d2531aa52e340137bebbc443484e9b99 259 PIRSF PIRSF011572 1 257 2.3E-122 T 11-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 437 552 1.0E-8 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 445 2.1E-153 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Gene3D G3DSA:3.40.50.970 1 174 2.2E-72 T 11-10-2018 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 SUPERFAMILY SSF52518 10 180 6.38E-37 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Gene3D G3DSA:3.40.50.970 382 579 4.0E-67 T 11-10-2018 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 PIRSF PIRSF004983 1 576 8.3E-203 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Pfam PF16582 Middle domain of thiamine pyrophosphate 220 403 1.8E-17 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 11 176 6.2E-41 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Gene3D G3DSA:3.40.50.1220 199 379 6.6E-54 T 11-10-2018 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 SUPERFAMILY SSF52467 167 364 1.24E-10 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 570 37.559 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 ABE28_020810 2c12c0b4ad432446cbb5f99ca9d10cdc 583 SUPERFAMILY SSF52518 377 578 8.84E-32 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 SUPERFAMILY SSF46894 132 224 1.53E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 222 7.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 Gene3D G3DSA:1.10.10.10 129 228 6.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 Gene3D G3DSA:3.40.50.2300 2 128 2.8E-27 T 11-10-2018 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 Pfam PF00072 Response regulator receiver domain 5 113 1.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 SMART SM00448 2 112 1.4E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 SMART SM00862 148 223 5.3E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_017585 46e48d1f7fc05e5cfa3c458632c3e500 229 SUPERFAMILY SSF52172 3 118 2.13E-32 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 SUPERFAMILY SSF82689 252 354 2.62E-13 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 Gene3D G3DSA:3.30.70.100 251 348 1.7E-13 T 11-10-2018 ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 Gene3D G3DSA:2.30.30.60 200 249 1.4E-13 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 SUPERFAMILY SSF82861 99 183 3.27E-11 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 SUPERFAMILY SSF50182 184 250 1.41E-18 T 11-10-2018 IPR010920 LSM domain superfamily ABE28_013070 aacc8fa950ee8a4b1124cfa3bc13d6ed 370 Pfam PF00924 Mechanosensitive ion channel 142 344 2.5E-61 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 SMART SM00062 40 255 1.4E-19 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 Gene3D G3DSA:3.40.190.10 120 219 1.8E-107 T 11-10-2018 ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 41 318 1.2E-72 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 Gene3D G3DSA:1.10.8.450 250 282 1.8E-107 T 11-10-2018 ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 Gene3D G3DSA:3.40.190.10 41 313 1.8E-107 T 11-10-2018 ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 Pfam PF09084 NMT1/THI5 like 81 263 6.9E-15 T 11-10-2018 IPR015168 SsuA/THI5-like ABE28_000240 c146503fac5e9910bed5e8af624911e7 329 SUPERFAMILY SSF53850 39 269 2.18E-51 T 11-10-2018 ABE28_009745 304ae543cdb3938c4d70a8a2d7267faf 101 Gene3D G3DSA:3.40.50.2300 1 101 1.8E-38 T 11-10-2018 ABE28_009745 304ae543cdb3938c4d70a8a2d7267faf 101 SUPERFAMILY SSF52794 1 100 9.42E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_009745 304ae543cdb3938c4d70a8a2d7267faf 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 7.9E-37 T 11-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 ABE28_009745 304ae543cdb3938c4d70a8a2d7267faf 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 9.6E-24 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_008480 65dd29c2199aeea5a3ccd149998f10eb 363 SUPERFAMILY SSF51182 5 352 1.85E-102 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_008480 65dd29c2199aeea5a3ccd149998f10eb 363 Gene3D G3DSA:2.60.120.10 2 356 2.3E-117 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_008480 65dd29c2199aeea5a3ccd149998f10eb 363 Pfam PF07883 Cupin domain 95 162 7.3E-20 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_008480 65dd29c2199aeea5a3ccd149998f10eb 363 Pfam PF07883 Cupin domain 263 321 4.1E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_005830 2ed68433e12dd2f458ecd96fb15fbed6 421 Gene3D G3DSA:3.30.2010.10 204 285 1.0E-24 T 11-10-2018 ABE28_005830 2ed68433e12dd2f458ecd96fb15fbed6 421 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 47 204 1.7E-16 T 11-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 ABE28_005830 2ed68433e12dd2f458ecd96fb15fbed6 421 Pfam PF01435 Peptidase family M48 208 415 1.7E-33 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 ABE28_007565 2013608a4572cb6128965c60950249f4 223 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 223 27.929 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABE28_007565 2013608a4572cb6128965c60950249f4 223 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 223 1.9E-51 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABE28_007565 2013608a4572cb6128965c60950249f4 223 SUPERFAMILY SSF51419 3 222 4.36E-70 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_007565 2013608a4572cb6128965c60950249f4 223 PIRSF PIRSF004848 2 223 3.5E-64 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 ABE28_007565 2013608a4572cb6128965c60950249f4 223 Pfam PF01168 Alanine racemase, N-terminal domain 27 222 1.9E-17 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_007565 2013608a4572cb6128965c60950249f4 223 Gene3D G3DSA:3.20.20.10 1 223 1.8E-73 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 SUPERFAMILY SSF51306 83 204 6.8E-38 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 Pfam PF00717 Peptidase S24-like 124 190 1.1E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 Gene3D G3DSA:2.10.109.10 89 206 9.1E-44 T 11-10-2018 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 Hamap MF_00015 LexA repressor [lexA]. 3 206 35.225 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 131 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 132 143 6.3E-11 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 Pfam PF01726 LexA DNA binding domain 1 65 2.6E-28 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 Gene3D G3DSA:1.10.10.10 2 68 1.7E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 4.3E-81 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 ABE28_009945 a27cd93d29880d1b5f3e2cc90c08931f 207 SUPERFAMILY SSF46785 3 70 3.42E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_023830 031375616907f25fb48592c29e139719 641 Pfam PF01751 Toprim domain 426 537 1.6E-18 T 11-10-2018 IPR006171 TOPRIM domain ABE28_023830 031375616907f25fb48592c29e139719 641 SUPERFAMILY SSF56719 401 632 2.35E-92 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_023830 031375616907f25fb48592c29e139719 641 SMART SM00387 36 180 7.1E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023830 031375616907f25fb48592c29e139719 641 Pfam PF00204 DNA gyrase B 228 397 7.9E-65 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023830 031375616907f25fb48592c29e139719 641 SUPERFAMILY SSF54211 228 398 2.28E-62 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_023830 031375616907f25fb48592c29e139719 641 Gene3D G3DSA:3.30.565.10 7 226 4.0E-92 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023830 031375616907f25fb48592c29e139719 641 SMART SM00433 40 634 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023830 031375616907f25fb48592c29e139719 641 Gene3D G3DSA:3.30.230.10 227 405 2.6E-75 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_023830 031375616907f25fb48592c29e139719 641 Gene3D G3DSA:3.40.50.670 406 641 4.8E-109 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023830 031375616907f25fb48592c29e139719 641 SUPERFAMILY SSF55874 11 223 1.44E-72 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023830 031375616907f25fb48592c29e139719 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 38 177 5.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023830 031375616907f25fb48592c29e139719 641 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 11 641 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 275 288 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 427 441 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 118 132 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 40 55 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 493 509 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 573 589 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 75 88 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 511 528 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR00418 DNA topoisomerase II family signature 531 543 3.3E-72 T 11-10-2018 ABE28_023830 031375616907f25fb48592c29e139719 641 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 8 641 98.119 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 ProSitePatterns PS00177 DNA topoisomerase II signature. 429 437 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023830 031375616907f25fb48592c29e139719 641 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 630 1.2E-31 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 11 21 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 367 381 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 610 626 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 186 201 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 381 401 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 227 249 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 201 214 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 477 486 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 594 606 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_023830 031375616907f25fb48592c29e139719 641 PRINTS PR01159 DNA gyrase subunit B signature 319 335 1.1E-77 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_003315 68b94813239d221bdf5a49bf9e0ca718 279 SUPERFAMILY SSF46785 30 106 6.49E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003315 68b94813239d221bdf5a49bf9e0ca718 279 Gene3D G3DSA:1.10.10.10 45 137 5.5E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003315 68b94813239d221bdf5a49bf9e0ca718 279 Pfam PF13730 Helix-turn-helix domain 51 99 8.9E-6 T 11-10-2018 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 Gene3D G3DSA:3.40.50.720 1 128 1.1E-28 T 11-10-2018 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 SUPERFAMILY SSF55347 131 275 3.92E-34 T 11-10-2018 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 237 2.0E-12 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 Gene3D G3DSA:3.30.360.10 129 365 6.6E-46 T 11-10-2018 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 6.3E-15 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_003930 caa61b8dffb8a81c5e629858f4ea567d 386 SUPERFAMILY SSF51735 3 156 2.44E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 Gene3D G3DSA:3.30.479.20 56 146 8.7E-25 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 Gene3D G3DSA:1.10.8.10 1 55 1.0E-26 T 11-10-2018 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 2.3E-114 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 79.065 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 Pfam PF00889 Elongation factor TS 70 274 1.1E-72 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 SUPERFAMILY SSF54713 55 144 1.96E-21 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 SUPERFAMILY SSF54713 151 293 4.58E-50 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 SUPERFAMILY SSF46934 3 54 1.02E-19 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 ABE28_008100 185eef9f380c05c16eaf8a70812a499b 294 Gene3D G3DSA:1.10.286.20 199 236 2.1E-19 T 11-10-2018 ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 SMART SM00490 255 336 3.9E-32 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 SUPERFAMILY SSF52540 71 353 8.42E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 Gene3D G3DSA:3.40.50.300 209 397 1.6E-50 T 11-10-2018 ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 Pfam PF00270 DEAD/DEAH box helicase 26 192 5.7E-52 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 Pfam PF00271 Helicase conserved C-terminal domain 228 336 2.5E-30 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 SMART SM00487 21 214 1.1E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_023345 4e8693f9c073ca1fafbce21639a786ab 503 Gene3D G3DSA:3.40.50.300 1 208 4.8E-75 T 11-10-2018 ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 PIRSF PIRSF000090 1 257 1.0E-75 T 11-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 155 175 - T 11-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 Gene3D G3DSA:3.40.50.620 1 256 1.7E-80 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 SUPERFAMILY SSF52402 2 246 6.47E-75 T 11-10-2018 ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 SMART SM00893 21 211 2.8E-56 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABE28_016700 e06331b2a514acff4d0e4e7f6708f4ee 257 Pfam PF01012 Electron transfer flavoprotein domain 23 206 4.9E-48 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 476 595 1.4E-45 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 Pfam PF00367 phosphotransferase system, EIIB 9 41 3.7E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 Gene3D G3DSA:3.30.1360.60 1 77 3.8E-26 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 SUPERFAMILY SSF51261 468 619 7.85E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 Pfam PF02378 Phosphotransferase system, EIIC 109 386 1.0E-22 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 475 598 2.6E-51 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 4 619 8.5E-200 T 11-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 537 549 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 SUPERFAMILY SSF55604 8 80 7.85E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_004390 fe44d79a2af9a85c9b4322af240d3e28 621 Gene3D G3DSA:2.70.70.10 463 621 1.5E-56 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 PRINTS PR00342 Rhesus blood group protein signature 225 247 9.8E-6 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 PRINTS PR00342 Rhesus blood group protein signature 280 298 9.8E-6 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 PRINTS PR00342 Rhesus blood group protein signature 194 212 9.8E-6 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 PRINTS PR00342 Rhesus blood group protein signature 101 117 9.8E-6 T 11-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 Pfam PF00909 Ammonium Transporter Family 7 400 2.5E-132 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 TIGRFAM TIGR00836 amt: ammonium transporter 5 400 1.0E-144 T 11-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 ProSitePatterns PS01219 Ammonium transporters signature. 157 182 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 SUPERFAMILY SSF111352 3 381 2.35E-128 T 11-10-2018 ABE28_002415 314d513979891dd7f4bef2f487eab49b 404 Gene3D G3DSA:1.10.3430.10 1 404 2.6E-146 T 11-10-2018 IPR029020 Ammonium/urea transporter ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 Gene3D G3DSA:3.40.50.1860 5 253 7.6E-96 T 11-10-2018 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 11-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 SUPERFAMILY SSF53681 110 262 1.64E-39 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 SUPERFAMILY SSF53681 4 105 1.63E-36 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 Hamap MF_00258 Glutamate racemase [murI]. 3 255 40.468 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 Gene3D G3DSA:3.40.50.1860 94 206 7.6E-96 T 11-10-2018 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 214 4.0E-39 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_016640 926cd2d8a1d94560615ccd50bb826c23 267 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 253 1.0E-85 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 Pfam PF04552 Sigma-54, DNA binding domain 297 456 8.6E-59 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 51 1.3E-15 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 455 2.4E-133 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 436 443 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 Gene3D G3DSA:1.10.10.1330 101 216 2.1E-25 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 Gene3D G3DSA:1.10.10.60 397 455 1.1E-21 T 11-10-2018 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 PRINTS PR00045 Sigma-54 factor signature 169 186 3.2E-26 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 PRINTS PR00045 Sigma-54 factor signature 431 449 3.2E-26 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 PRINTS PR00045 Sigma-54 factor signature 372 383 3.2E-26 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 PRINTS PR00045 Sigma-54 factor signature 356 368 3.2E-26 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 Pfam PF04963 Sigma-54 factor, core binding domain 97 283 2.2E-53 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 ABE28_002510 93f09a533eb9ad4aa2eceb9ff42978ff 457 PIRSF PIRSF000774 1 457 2.4E-139 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 Gene3D G3DSA:3.20.20.80 5 473 1.8E-208 T 11-10-2018 ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 SUPERFAMILY SSF51011 481 558 9.81E-17 T 11-10-2018 ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 Pfam PF00128 Alpha amylase, catalytic domain 28 377 1.0E-128 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 Pfam PF16657 Maltogenic Amylase, C-terminal domain 481 535 1.2E-8 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 Gene3D G3DSA:2.60.40.1180 482 558 2.2E-19 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 SMART SM00642 13 420 9.6E-166 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 SUPERFAMILY SSF51445 4 478 8.1E-163 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_021880 44a40fe3a7b4b04400a9733ee3b221e0 559 Gene3D G3DSA:3.90.400.10 105 174 1.8E-208 T 11-10-2018 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 Gene3D G3DSA:3.30.870.10 46 251 2.1E-33 T 11-10-2018 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 SUPERFAMILY SSF56024 49 219 2.2E-29 T 11-10-2018 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 SUPERFAMILY SSF56024 246 423 3.81E-21 T 11-10-2018 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 Pfam PF13091 PLD-like domain 296 416 1.9E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 Pfam PF13091 PLD-like domain 66 195 1.1E-18 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 Gene3D G3DSA:3.30.870.10 264 462 8.5E-25 T 11-10-2018 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 SMART SM00155 149 176 0.0071 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_018295 a7bd1a3a12579aab33e961e02efcc07f 469 SMART SM00155 369 396 0.0079 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 Gene3D G3DSA:3.40.50.1370 127 270 6.0E-97 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 256 279 8.7E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 8.7E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 8.7E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 244 253 8.7E-23 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 SUPERFAMILY SSF53671 1 292 1.03E-88 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 293 39.203 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 288 2.1E-22 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 139 1.0E-36 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 Gene3D G3DSA:3.40.50.1370 6 287 6.0E-97 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 291 3.3E-92 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 248 253 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 272 286 3.8E-31 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007615 52372c6591369d077136ec6ae41c5879 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 ABE28_000315 14e003c4a8266e409406ccd36dafbf7c 152 SMART SM00316 4 74 6.7E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_000315 14e003c4a8266e409406ccd36dafbf7c 152 SUPERFAMILY SSF50249 4 85 4.19E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000315 14e003c4a8266e409406ccd36dafbf7c 152 Pfam PF00575 S1 RNA binding domain 4 74 2.3E-22 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_000315 14e003c4a8266e409406ccd36dafbf7c 152 Gene3D G3DSA:2.40.50.140 1 84 8.8E-29 T 11-10-2018 ABE28_003655 45153870dddabc65b5426884009ba8cb 176 Hamap MF_01568 UPF0374 protein . 2 176 48.971 T 11-10-2018 IPR016882 Uncharacterised protein family UPF0374 ABE28_003655 45153870dddabc65b5426884009ba8cb 176 Gene3D G3DSA:2.40.380.10 17 171 1.4E-11 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_003655 45153870dddabc65b5426884009ba8cb 176 Pfam PF04167 Protein of unknown function (DUF402) 61 125 1.1E-17 T 11-10-2018 IPR007295 Domain of unknown function DUF402 ABE28_003655 45153870dddabc65b5426884009ba8cb 176 SUPERFAMILY SSF159234 5 171 1.31E-31 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_003655 45153870dddabc65b5426884009ba8cb 176 PIRSF PIRSF028345 3 176 2.3E-77 T 11-10-2018 IPR016882 Uncharacterised protein family UPF0374 ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 Gene3D G3DSA:3.40.50.300 374 513 4.0E-104 T 11-10-2018 ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 SMART SM00490 545 634 8.4E-22 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 Pfam PF00271 Helicase conserved C-terminal domain 530 634 1.6E-14 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 Gene3D G3DSA:3.40.50.300 514 658 4.0E-104 T 11-10-2018 ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 SUPERFAMILY SSF52540 372 643 2.08E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011275 b5823d8f2b3ad320c84767565ae67ec4 856 Gene3D G3DSA:1.20.272.40 659 696 4.0E-104 T 11-10-2018 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 Pfam PF00367 phosphotransferase system, EIIB 436 468 5.5E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 404 492 2.4E-23 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 SUPERFAMILY SSF51261 542 681 5.76E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 Gene3D G3DSA:3.30.1360.60 432 509 8.2E-27 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 Gene3D G3DSA:2.70.70.10 531 689 3.7E-62 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 446 463 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 SUPERFAMILY SSF55604 435 506 1.44E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 Pfam PF02378 Phosphotransferase system, EIIC 13 345 7.4E-91 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 543 665 5.6E-51 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 544 663 2.6E-47 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 605 617 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001815 487cda816d616e90e531b10f8bc2e2a0 689 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 508 4.0E-245 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 ABE28_016080 dea35b25de805637a772931c5f237e92 627 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 160 170 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_016080 dea35b25de805637a772931c5f237e92 627 Gene3D G3DSA:2.60.40.10 546 622 3.0E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_016080 dea35b25de805637a772931c5f237e92 627 Gene3D G3DSA:2.60.40.10 462 538 1.4E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_016080 dea35b25de805637a772931c5f237e92 627 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 315 325 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_016080 dea35b25de805637a772931c5f237e92 627 Pfam PF00082 Subtilase family 119 365 2.6E-53 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_016080 dea35b25de805637a772931c5f237e92 627 SUPERFAMILY SSF52743 99 375 1.31E-92 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_016080 dea35b25de805637a772931c5f237e92 627 Gene3D G3DSA:3.40.50.200 59 379 3.5E-100 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_016080 dea35b25de805637a772931c5f237e92 627 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 123 134 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_016080 dea35b25de805637a772931c5f237e92 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 118 137 9.3E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_016080 dea35b25de805637a772931c5f237e92 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 156 169 9.3E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_016080 dea35b25de805637a772931c5f237e92 627 PRINTS PR00723 Subtilisin serine protease family (S8) signature 314 330 9.3E-18 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 3.1E-141 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PIRSF PIRSF000149 1 334 2.0E-144 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 SMART SM00846 3 152 1.9E-98 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 SUPERFAMILY SSF51735 3 168 8.66E-68 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 Gene3D G3DSA:3.40.50.720 4 329 1.3E-162 T 11-10-2018 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.0E-39 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 1.6E-74 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 Gene3D G3DSA:3.30.360.10 151 315 1.3E-162 T 11-10-2018 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 SUPERFAMILY SSF55347 152 314 1.67E-76 T 11-10-2018 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 4.6E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 4.6E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 4.6E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 4.6E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022145 65cfb34dca83609cc3639f30c3b4aaa4 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 4.6E-43 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 Gene3D G3DSA:3.40.50.20 1 87 2.2E-24 T 11-10-2018 ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 Gene3D G3DSA:2.160.10.10 89 197 1.5E-27 T 11-10-2018 ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 202 1.3E-68 T 11-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 SUPERFAMILY SSF51161 1 205 9.29E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 101 131 7.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_016025 721960c75128e675ad0cb39b7dd2ae6a 209 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 156 188 5.1E-4 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_022300 cea068f642e2f2f1af38783066b96593 959 SMART SM00382 25 564 15.0 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022300 cea068f642e2f2f1af38783066b96593 959 SMART SM00382 631 906 0.0024 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:3.40.50.300 7 595 2.8E-255 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:3.30.190.20 132 241 2.8E-255 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:3.40.50.300 612 934 2.7E-145 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:1.20.1580.10 691 828 2.7E-145 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 922 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:1.10.8.280 286 403 2.8E-255 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 SUPERFAMILY SSF52540 12 569 9.28E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Pfam PF00005 ABC transporter 622 858 1.0E-9 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 SUPERFAMILY SSF52540 613 912 1.16E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Gene3D G3DSA:1.20.1580.10 92 492 2.8E-255 T 11-10-2018 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.657 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 ABE28_022300 cea068f642e2f2f1af38783066b96593 959 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_011755 4b18d8aa32c50244c2c61fb2fcdcff5f 176 Gene3D G3DSA:3.10.450.420 23 176 2.5E-50 T 11-10-2018 ABE28_011755 4b18d8aa32c50244c2c61fb2fcdcff5f 176 Pfam PF16800 IseA DL-endopeptidase inhibitor 27 174 5.5E-51 T 11-10-2018 IPR031841 DL-endopeptidase inhibitor IseA ABE28_021895 872accdb6241db55c032b0cb2594531e 479 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 3 453 2.0E-146 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_021895 872accdb6241db55c032b0cb2594531e 479 PIRSF PIRSF005690 3 468 3.0E-140 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 SUPERFAMILY SSF52743 441 721 2.49E-82 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:3.40.50.200 399 685 1.1E-79 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 633 649 6.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 439 458 6.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 PRINTS PR00723 Subtilisin serine protease family (S8) signature 479 492 6.8E-14 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 634 644 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:2.60.40.10 804 881 3.1E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:2.60.40.10 971 1046 3.5E-16 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:2.60.40.10 724 793 2.6E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:2.60.40.10 888 963 8.4E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 483 493 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Pfam PF00082 Subtilase family 440 675 7.9E-46 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_020610 de4021a7947d6b4bef7a6bed9f65c7aa 1054 Gene3D G3DSA:2.60.120.380 26 153 6.4E-6 T 11-10-2018 ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 SMART SM01121 240 556 1.3E-187 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 556 2.0E-216 T 11-10-2018 IPR019986 DAK2 domain-containing protein YloV ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 Gene3D G3DSA:1.25.40.340 4 179 1.6E-12 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 SUPERFAMILY SSF101473 3 200 1.19E-47 T 11-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 Pfam PF02734 DAK2 domain 36 200 3.4E-43 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 SMART SM01120 36 201 7.7E-73 T 11-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 ABE28_007755 2702c6fb2f269067aaa12b1794d15c34 556 Pfam PF13684 Dihydroxyacetone kinase family 241 556 2.2E-127 T 11-10-2018 IPR033470 Uncharacterised protein, DhaK domain ABE28_019210 7c788bdedcc6cc53f2a8a649369cf8eb 424 SUPERFAMILY SSF54427 274 400 3.02E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019210 7c788bdedcc6cc53f2a8a649369cf8eb 424 Gene3D G3DSA:3.10.450.50 265 403 1.3E-23 T 11-10-2018 ABE28_019210 7c788bdedcc6cc53f2a8a649369cf8eb 424 SUPERFAMILY SSF54427 85 226 3.42E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019210 7c788bdedcc6cc53f2a8a649369cf8eb 424 Pfam PF07366 SnoaL-like polyketide cyclase 271 399 4.7E-18 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABE28_019210 7c788bdedcc6cc53f2a8a649369cf8eb 424 Gene3D G3DSA:3.10.450.50 90 235 5.2E-19 T 11-10-2018 ABE28_013250 b368683803395c1ba2a963233414008a 92 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 3 91 9.3E-39 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU ABE28_013250 b368683803395c1ba2a963233414008a 92 Pfam PF14122 YokU-like protein, putative antitoxin 3 89 7.2E-36 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU ABE28_013250 b368683803395c1ba2a963233414008a 92 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 45 1.4E-8 T 11-10-2018 IPR022453 Zinc finger, MqsA-type ABE28_010150 1044bf053dc6145e73ec84554b189693 159 SUPERFAMILY SSF75169 5 157 2.8E-22 T 11-10-2018 IPR027396 DsrEFH-like ABE28_010150 1044bf053dc6145e73ec84554b189693 159 Pfam PF13686 DsrE/DsrF/DrsH-like family 4 158 7.1E-68 T 11-10-2018 IPR032836 DsrE2-like family ABE28_010150 1044bf053dc6145e73ec84554b189693 159 Gene3D G3DSA:3.40.1260.10 1 159 4.5E-66 T 11-10-2018 IPR027396 DsrEFH-like ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 Gene3D G3DSA:3.30.70.580 55 127 3.7E-27 T 11-10-2018 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 Gene3D G3DSA:3.30.70.1560 128 215 8.7E-31 T 11-10-2018 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 SUPERFAMILY SSF55120 45 237 5.04E-48 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 Gene3D G3DSA:3.10.290.10 1 54 1.1E-21 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 Pfam PF00849 RNA pseudouridylate synthase 62 196 5.8E-26 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 SMART SM00363 2 59 2.9E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 1.4E-52 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 SUPERFAMILY SSF55174 2 67 6.28E-16 T 11-10-2018 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 Pfam PF01479 S4 domain 2 48 3.2E-16 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_014500 e784b166eebc83a93c0248f05edbe394 246 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 Pfam PF01306 LacY proton/sugar symporter 2 400 2.8E-135 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 Gene3D G3DSA:1.20.1250.20 200 398 3.8E-58 T 11-10-2018 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 6 396 3.9E-134 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 SUPERFAMILY SSF103473 5 402 7.98E-44 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 Gene3D G3DSA:1.20.1250.20 1 199 1.7E-40 T 11-10-2018 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 145 163 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 279 305 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 310 329 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 208 236 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 68 97 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 103 125 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 341 361 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011650 beb1c3767e0ce063e8ae539461feeaa8 414 PRINTS PR00174 LacY proton/sugar symporter family signature 255 276 3.4E-81 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 788 986 8.3E-45 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 SUPERFAMILY SSF101967 635 781 1.57E-9 T 11-10-2018 ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 Gene3D G3DSA:2.150.10.10 634 732 1.0E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 SUPERFAMILY SSF58104 189 394 3.14E-7 T 11-10-2018 ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 347 374 8.2E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 243 269 8.0E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 678 705 1.4E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 270 297 7.5E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 265 290 4.5E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 321 346 3.2E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 714 740 1.2E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 15 168 7.7E-53 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 Pfam PF12698 ABC-2 family transporter protein 22 159 1.6E-11 T 11-10-2018 ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 Pfam PF12698 ABC-2 family transporter protein 798 983 9.4E-9 T 11-10-2018 ABE28_022595 6e3709867152cf966a4552861eeaef78 1001 Gene3D G3DSA:2.150.10.10 532 622 7.1E-5 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 PIRSF PIRSF000429 1 400 1.6E-141 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 ProSitePatterns PS00099 Thiolases active site. 380 393 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 Gene3D G3DSA:3.40.47.10 142 396 3.5E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 Gene3D G3DSA:3.40.47.10 6 282 3.5E-159 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 SUPERFAMILY SSF53901 3 276 2.78E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 Pfam PF02803 Thiolase, C-terminal domain 276 397 5.1E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 Pfam PF00108 Thiolase, N-terminal domain 4 268 3.2E-82 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 ProSitePatterns PS00737 Thiolases signature 2. 345 361 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 397 5.2E-145 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_005140 95d80b04af678e00c75e9a9f72e1a587 402 SUPERFAMILY SSF53901 277 398 1.01E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_021875 3ad65b0c021097a12e18378e1945e97c 483 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_021875 3ad65b0c021097a12e18378e1945e97c 483 PIRSF PIRSF006060 2 477 6.4E-87 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_021875 3ad65b0c021097a12e18378e1945e97c 483 Pfam PF00324 Amino acid permease 21 472 4.4E-141 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_021875 3ad65b0c021097a12e18378e1945e97c 483 Gene3D G3DSA:1.20.1740.10 12 474 3.5E-59 T 11-10-2018 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 1.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 1.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 1.7E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.8E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 SUPERFAMILY SSF46894 147 214 1.39E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 Pfam PF00072 Response regulator receiver domain 4 115 3.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 SMART SM00448 2 115 2.5E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 SMART SM00421 152 209 3.5E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 Gene3D G3DSA:3.40.50.12740 2 214 2.1E-67 T 11-10-2018 ABE28_002355 336a60f67239cf2053568b7b391ec243 219 SUPERFAMILY SSF52172 1 129 6.4E-32 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_002355 336a60f67239cf2053568b7b391ec243 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 169 196 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 Gene3D G3DSA:3.20.20.20 1 259 5.0E-109 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 SUPERFAMILY SSF56014 261 362 3.78E-15 T 11-10-2018 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 Pfam PF04551 GcpE protein 10 351 7.3E-139 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 SUPERFAMILY SSF51717 15 215 3.22E-17 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 2.1E-131 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 PIRSF PIRSF004640 1 361 1.0E-155 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 Gene3D G3DSA:3.30.413.10 261 359 4.3E-35 T 11-10-2018 ABE28_015285 abcd54b042d27411f54ee57b2b5ecb3c 370 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.911 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SMART SM00304 204 257 1.7E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF52172 818 934 2.13E-23 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:1.10.287.130 572 648 6.1E-26 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Pfam PF00512 His Kinase A (phospho-acceptor) domain 579 645 3.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 754 7.0E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 761 779 7.0E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 785 798 7.0E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 PRINTS PR00344 Bacterial sensor protein C-terminal signature 726 740 7.0E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF55781 292 455 3.93E-13 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:1.20.1480.50 161 262 3.6E-9 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF158472 204 254 8.89E-6 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:3.30.565.10 649 808 1.0E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SMART SM00387 689 801 1.1E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF55785 442 571 4.0E-8 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Pfam PF12860 PAS fold 458 576 6.8E-7 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF55874 634 802 5.89E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:3.30.450.20 459 571 2.9E-9 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SMART SM00388 579 645 6.6E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:3.30.450.40 286 458 3.1E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Pfam PF00072 Response regulator receiver domain 820 930 2.6E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Gene3D G3DSA:3.40.50.12740 816 947 5.0E-24 T 11-10-2018 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SUPERFAMILY SSF47384 565 646 5.69E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 SMART SM00448 818 930 1.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012850 1707abf87c2096ded145418cd1ef6655 955 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 689 799 8.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 700 714 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF52335 934 1051 5.89E-31 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:3.40.50.20 1 116 2.1E-48 T 11-10-2018 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF56059 664 925 3.36E-101 T 11-10-2018 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:1.10.1030.10 402 544 1.1E-47 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF48108 394 544 6.28E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SMART SM01096 418 538 2.9E-66 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:3.30.470.20 120 401 9.8E-125 T 11-10-2018 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1055 13.22 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:3.40.50.1380 929 1062 4.6E-35 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1045 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 828 835 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Pfam PF02142 MGS-like domain 949 1034 3.0E-18 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:3.30.470.20 657 927 7.6E-107 T 11-10-2018 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF52440 547 666 3.31E-48 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 4.1E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 421 538 6.1E-42 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SMART SM00851 947 1034 3.5E-27 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF56059 128 399 6.36E-109 T 11-10-2018 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 SUPERFAMILY SSF52440 1 127 1.12E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.501 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 1.4E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 665 864 1.1E-37 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_007630 e07649bfe053bcae57e2b8d18d046a67 1068 Gene3D G3DSA:3.40.50.20 545 653 8.0E-46 T 11-10-2018 ABE28_019505 e4fea62184c34e19ec630cdb116c1c49 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 362 5.4E-53 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_019505 e4fea62184c34e19ec630cdb116c1c49 363 Pfam PF03845 Spore germination protein 11 324 2.8E-78 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 SUPERFAMILY SSF51735 16 279 1.06E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 218 478 8.3E-45 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 27 183 6.4E-15 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 Gene3D G3DSA:1.10.1040.10 284 497 4.9E-49 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 Gene3D G3DSA:3.40.50.720 10 279 2.3E-47 T 11-10-2018 ABE28_012465 46097f999f88a0cf413fd449a86c72e1 498 SUPERFAMILY SSF48179 284 494 1.05E-37 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Pfam PF03793 PASTA domain 583 636 3.9E-7 T 11-10-2018 IPR005543 PASTA domain ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Gene3D G3DSA:3.90.1310.30 49 219 2.6E-49 T 11-10-2018 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Gene3D G3DSA:3.30.450.330 221 560 9.6E-113 T 11-10-2018 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 SUPERFAMILY SSF56601 170 568 1.16E-100 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Gene3D G3DSA:3.30.10.20 581 636 3.4E-6 T 11-10-2018 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 14 637 2.5E-261 T 11-10-2018 IPR011927 Stage V sporulation protein D ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 SUPERFAMILY SSF54184 583 636 8.37E-10 T 11-10-2018 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 SMART SM00740 579 637 2.7E-8 T 11-10-2018 IPR005543 PASTA domain ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 556 3.7E-88 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Gene3D G3DSA:3.40.710.10 282 477 9.6E-113 T 11-10-2018 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 SUPERFAMILY SSF56519 51 219 1.27E-46 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_007495 df55b796eebd1627cb6f76ba32bbca35 640 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 203 8.1E-25 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 1.3E-31 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 Gene3D G3DSA:3.30.70.120 1 116 1.9E-38 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 PRINTS PR00340 P-II protein signature 6 21 2.3E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 PRINTS PR00340 P-II protein signature 87 107 2.3E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 PRINTS PR00340 P-II protein signature 56 79 2.3E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 PRINTS PR00340 P-II protein signature 27 45 2.3E-24 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 SUPERFAMILY SSF54913 6 118 2.13E-32 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABE28_002420 5a79f3634706b3ffbe956b16c4ab05b6 120 SMART SM00938 8 109 7.9E-38 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 Pfam PF00232 Glycosyl hydrolase family 1 6 480 1.1E-132 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 SUPERFAMILY SSF51445 4 476 3.32E-156 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 399 410 2.3E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 445 457 2.3E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 420 437 2.3E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 311 325 2.3E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 PRINTS PR00131 Glycosyl hydrolase family 1 signature 378 386 2.3E-17 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 Gene3D G3DSA:3.20.20.80 3 483 3.5E-145 T 11-10-2018 ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_023915 1b421ecd64c7c0b0835c6415253414b2 484 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 378 386 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 SUPERFAMILY SSF64288 61 239 1.88E-55 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 Pfam PF07702 UTRA domain 94 233 2.0E-40 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 Gene3D G3DSA:3.40.1410.10 77 240 4.1E-54 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 Gene3D G3DSA:1.10.10.10 8 76 4.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 SMART SM00345 14 73 1.7E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 SMART SM00866 94 233 1.6E-41 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 SUPERFAMILY SSF46785 1 84 1.11E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 5.1E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 5.1E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001105 eb042253513d8f8c703d8984fbee601f 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.0E-21 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Gene3D G3DSA:2.160.10.10 253 439 8.2E-55 T 11-10-2018 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 SUPERFAMILY SSF53448 4 307 1.64E-68 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 452 7.5E-189 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 42.29 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Gene3D G3DSA:3.90.550.10 1 252 2.5E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 SUPERFAMILY SSF51161 249 446 1.13E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Pfam PF00483 Nucleotidyl transferase 6 221 4.3E-25 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 284 310 5.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 1.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_000225 5cfc0925ad1105db2744866b8ffcfac2 457 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 352 2.7E-8 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_000470 114f8382042ae6c86d058733343ec551 485 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 484 34.053 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABE28_000470 114f8382042ae6c86d058733343ec551 485 Gene3D G3DSA:1.10.10.350 390 485 1.9E-33 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABE28_000470 114f8382042ae6c86d058733343ec551 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 8.5E-29 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 SUPERFAMILY SSF48163 298 483 2.75E-47 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABE28_000470 114f8382042ae6c86d058733343ec551 485 Gene3D G3DSA:3.40.50.620 1 332 4.1E-145 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000470 114f8382042ae6c86d058733343ec551 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 482 1.2E-193 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 ABE28_000470 114f8382042ae6c86d058733343ec551 485 SUPERFAMILY SSF52374 5 316 1.13E-114 T 11-10-2018 ABE28_000470 114f8382042ae6c86d058733343ec551 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 323 1.0E-125 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABE28_000470 114f8382042ae6c86d058733343ec551 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 Gene3D G3DSA:3.40.50.300 1 239 4.3E-73 T 11-10-2018 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 SMART SM00382 29 219 1.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 SUPERFAMILY SSF50331 237 364 1.58E-26 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 Gene3D G3DSA:2.40.50.100 240 362 7.6E-32 T 11-10-2018 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 SUPERFAMILY SSF52540 4 243 3.5E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 Gene3D G3DSA:2.40.50.140 303 348 7.6E-32 T 11-10-2018 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 Pfam PF00005 ABC transporter 21 162 4.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_005530 8aea4af2de723bd67b32bbd17fe2e9bf 381 Pfam PF03459 TOBE domain 302 355 2.0E-5 T 11-10-2018 IPR005116 Transport-associated OB, type 1 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 Gene3D G3DSA:1.10.260.40 1 62 1.6E-22 T 11-10-2018 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 Gene3D G3DSA:3.40.50.2300 65 325 1.2E-75 T 11-10-2018 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 Gene3D G3DSA:3.40.50.2300 163 330 1.2E-75 T 11-10-2018 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 SUPERFAMILY SSF53822 64 333 4.17E-71 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 SUPERFAMILY SSF47413 2 62 3.85E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 1.2E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 Pfam PF13377 Periplasmic binding protein-like domain 171 333 2.1E-35 T 11-10-2018 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 SMART SM00354 3 74 3.4E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_012490 435e89aeac88bb84cde4c0be73db19ce 333 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 11-10-2018 ABE28_020155 5b2f601e1984871fd93d6ba4094a81b2 240 Pfam PF00005 ABC transporter 21 161 5.6E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_020155 5b2f601e1984871fd93d6ba4094a81b2 240 Gene3D G3DSA:3.40.50.300 1 239 2.9E-64 T 11-10-2018 ABE28_020155 5b2f601e1984871fd93d6ba4094a81b2 240 SMART SM00382 29 209 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020155 5b2f601e1984871fd93d6ba4094a81b2 240 SUPERFAMILY SSF52540 4 224 1.85E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020155 5b2f601e1984871fd93d6ba4094a81b2 240 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 PIRSF PIRSF005962 1 374 2.7E-93 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 Gene3D G3DSA:3.30.70.360 169 281 4.3E-78 T 11-10-2018 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 Gene3D G3DSA:3.40.630.10 14 356 4.3E-78 T 11-10-2018 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 Pfam PF01546 Peptidase family M20/M25/M40 69 367 2.5E-23 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 SUPERFAMILY SSF55031 173 281 5.89E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 Pfam PF07687 Peptidase dimerisation domain 177 266 2.0E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 359 9.2E-83 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_004890 073043d7434f9f2102fe7e3e7669d613 383 SUPERFAMILY SSF53187 2 367 6.91E-57 T 11-10-2018 ABE28_013075 865caed6955c5c9e3bf5143cb60fa1ad 451 PIRSF PIRSF006603 1 451 5.7E-69 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_013075 865caed6955c5c9e3bf5143cb60fa1ad 451 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 7.6E-102 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_013075 865caed6955c5c9e3bf5143cb60fa1ad 451 Pfam PF01554 MatE 20 180 3.9E-34 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_013075 865caed6955c5c9e3bf5143cb60fa1ad 451 Pfam PF01554 MatE 247 407 1.0E-36 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 474 721 4.2E-68 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 403 6.8E-105 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 SUPERFAMILY SSF82866 213 408 9.55E-40 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Gene3D G3DSA:1.20.1640.10 423 472 3.8E-15 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Pfam PF07549 SecD/SecF GG Motif 467 489 3.1E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 555 718 3.4E-52 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 186 396 2.0E-57 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Gene3D G3DSA:3.30.70.1320 232 246 3.8E-15 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Gene3D G3DSA:1.20.1640.10 247 419 3.8E-15 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 2 418 33.159 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 SUPERFAMILY SSF82866 550 729 5.23E-34 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Pfam PF02355 Protein export membrane protein 552 729 2.8E-64 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Pfam PF02355 Protein export membrane protein 237 399 1.3E-14 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Gene3D G3DSA:3.30.70.3400 34 121 7.4E-23 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Gene3D G3DSA:1.20.1640.10 538 729 4.9E-6 T 11-10-2018 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 445 732 26.112 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 PRINTS PR01755 Bacterial translocase SecF protein signature 669 684 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 PRINTS PR01755 Bacterial translocase SecF protein signature 633 651 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 PRINTS PR01755 Bacterial translocase SecF protein signature 472 487 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_016175 ce88bc45d9205f52a8033537e6d3c38a 753 PRINTS PR01755 Bacterial translocase SecF protein signature 585 599 9.5E-28 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial ABE28_012350 69f3268c5dbd2411278ef247e6a51ab3 66 Pfam PF13395 HNH endonuclease 20 56 1.0E-7 T 11-10-2018 IPR003615 HNH nuclease ABE28_012350 69f3268c5dbd2411278ef247e6a51ab3 66 Gene3D G3DSA:3.30.40.60 1 66 3.6E-7 T 11-10-2018 ABE28_004730 cc098883b532694030316d048279fbfc 182 ProSitePatterns PS00760 Signal peptidases I lysine active site. 78 90 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ABE28_004730 cc098883b532694030316d048279fbfc 182 Pfam PF00717 Peptidase S24-like 35 100 5.4E-22 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_004730 cc098883b532694030316d048279fbfc 182 SUPERFAMILY SSF51306 28 180 6.28E-50 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_004730 cc098883b532694030316d048279fbfc 182 ProSitePatterns PS00761 Signal peptidases I signature 3. 140 153 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ABE28_004730 cc098883b532694030316d048279fbfc 182 Gene3D G3DSA:2.10.109.10 55 181 1.6E-42 T 11-10-2018 ABE28_004730 cc098883b532694030316d048279fbfc 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 5.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_004730 cc098883b532694030316d048279fbfc 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 5.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_004730 cc098883b532694030316d048279fbfc 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 88 5.3E-21 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_004730 cc098883b532694030316d048279fbfc 182 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 13 176 1.0E-50 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_017720 214a075cfb6639fcd171a9c6c6862b28 438 Gene3D G3DSA:1.20.1720.10 9 237 2.5E-46 T 11-10-2018 ABE28_017720 214a075cfb6639fcd171a9c6c6862b28 438 Pfam PF07690 Major Facilitator Superfamily 13 193 1.3E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_017720 214a075cfb6639fcd171a9c6c6862b28 438 Pfam PF07690 Major Facilitator Superfamily 263 427 1.6E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_017720 214a075cfb6639fcd171a9c6c6862b28 438 Gene3D G3DSA:1.20.1250.20 250 434 9.2E-23 T 11-10-2018 ABE28_017720 214a075cfb6639fcd171a9c6c6862b28 438 SUPERFAMILY SSF103473 5 431 6.93E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001130 8df11d77c1b1c65c7d117abfa326ba24 340 Pfam PF01032 FecCD transport family 19 337 2.5E-85 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_001130 8df11d77c1b1c65c7d117abfa326ba24 340 SUPERFAMILY SSF81345 4 337 1.44E-74 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_001130 8df11d77c1b1c65c7d117abfa326ba24 340 Gene3D G3DSA:1.10.3470.10 6 340 1.3E-91 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_006785 a2d0204b001e69569b10e16869e98443 366 SUPERFAMILY SSF51735 6 357 5.38E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006785 a2d0204b001e69569b10e16869e98443 366 Gene3D G3DSA:3.40.50.720 2 358 1.3E-53 T 11-10-2018 ABE28_006785 a2d0204b001e69569b10e16869e98443 366 Pfam PF07993 Male sterility protein 8 243 3.8E-47 T 11-10-2018 IPR013120 Male sterility, NAD-binding Reactome: R-HSA-8848584 ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 7.6E-70 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 SUPERFAMILY SSF52540 4 192 3.52E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 Gene3D G3DSA:3.30.63.10 37 96 2.1E-65 T 11-10-2018 ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 Pfam PF00625 Guanylate kinase 7 183 2.4E-51 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 35.927 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 SMART SM00072 4 187 1.5E-72 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 Gene3D G3DSA:3.40.50.300 9 183 2.1E-65 T 11-10-2018 ABE28_007675 0358b22cde638b62aea1edf1bef73dd4 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 ABE28_001605 29d01043fc1e1797fe7ef60fa57684a5 335 SUPERFAMILY SSF54001 207 334 3.63E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_001605 29d01043fc1e1797fe7ef60fa57684a5 335 Pfam PF00877 NlpC/P60 family 226 332 3.3E-25 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_001605 29d01043fc1e1797fe7ef60fa57684a5 335 Gene3D G3DSA:3.90.1720.10 211 335 1.0E-38 T 11-10-2018 ABE28_001605 29d01043fc1e1797fe7ef60fa57684a5 335 Gene3D G3DSA:2.30.30.40 25 141 4.7E-43 T 11-10-2018 ABE28_001605 29d01043fc1e1797fe7ef60fa57684a5 335 Gene3D G3DSA:2.30.30.40 142 209 1.5E-20 T 11-10-2018 ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 Pfam PF02687 FtsX-like permease family 551 643 2.6E-12 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 Pfam PF12704 MacB-like periplasmic core domain 269 497 2.8E-14 T 11-10-2018 IPR025857 MacB-like periplasmic core domain ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 Pfam PF00005 ABC transporter 24 172 4.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 SMART SM00382 33 229 1.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 Gene3D G3DSA:3.40.50.300 2 266 1.5E-67 T 11-10-2018 ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_018340 9d719daaa0c6d2483e13523d238793d2 650 SUPERFAMILY SSF52540 4 232 1.87E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002560 8371353a859929f5f9243d3ea390088e 146 Pfam PF13673 Acetyltransferase (GNAT) domain 34 143 9.3E-19 T 11-10-2018 IPR000182 GNAT domain ABE28_002560 8371353a859929f5f9243d3ea390088e 146 Gene3D G3DSA:3.40.630.30 2 145 3.3E-39 T 11-10-2018 ABE28_002560 8371353a859929f5f9243d3ea390088e 146 SUPERFAMILY SSF55729 8 143 5.4E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_019970 b149cf66056729d755413c5ed7caee53 220 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 32 196 5.2E-38 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal ABE28_019970 b149cf66056729d755413c5ed7caee53 220 SUPERFAMILY SSF81296 32 199 1.96E-62 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_019970 b149cf66056729d755413c5ed7caee53 220 Gene3D G3DSA:2.70.50.50 32 200 2.4E-71 T 11-10-2018 ABE28_000400 319d001faf056a8999f2eff000daba39 332 SUPERFAMILY SSF51395 11 320 1.39E-86 T 11-10-2018 ABE28_000400 319d001faf056a8999f2eff000daba39 332 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 320 5.8E-132 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 ABE28_000400 319d001faf056a8999f2eff000daba39 332 PIRSF PIRSF006621 1 330 5.8E-102 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_000400 319d001faf056a8999f2eff000daba39 332 Gene3D G3DSA:3.20.20.70 7 251 4.7E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_000400 319d001faf056a8999f2eff000daba39 332 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_000400 319d001faf056a8999f2eff000daba39 332 Gene3D G3DSA:1.10.1200.80 253 330 3.6E-16 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 ABE28_000400 319d001faf056a8999f2eff000daba39 332 Pfam PF01207 Dihydrouridine synthase (Dus) 14 314 5.4E-105 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 14 302 2.2E-79 T 11-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 Gene3D G3DSA:3.50.30.10 731 836 8.3E-32 T 11-10-2018 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 SUPERFAMILY SSF52009 732 833 4.71E-27 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 Gene3D G3DSA:3.30.1490.20 6 162 2.3E-38 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 Pfam PF00391 PEP-utilising enzyme, mobile domain 759 830 2.0E-23 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 SUPERFAMILY SSF56059 11 300 5.53E-74 T 11-10-2018 ABE28_017725 db8f5e2f8f4b7052395657b2b1a2736a 837 Gene3D G3DSA:3.30.470.20 164 308 9.6E-42 T 11-10-2018 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 Gene3D G3DSA:3.80.30.20 140 374 3.9E-88 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 418 3.3E-145 T 11-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 Pfam PF04055 Radical SAM superfamily 149 318 2.3E-26 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 Gene3D G3DSA:3.40.50.12160 3 134 1.1E-23 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 1.5E-25 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 SUPERFAMILY SSF102114 126 363 1.57E-56 T 11-10-2018 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 422 6.3E-150 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABE28_015490 c41302df1c7d57653423e35babad7fb9 445 SMART SM00729 143 360 7.3E-58 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_006495 c219425fefed5bba3b6521515759a04c 498 SUPERFAMILY SSF53474 5 472 4.45E-104 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006495 c219425fefed5bba3b6521515759a04c 498 Gene3D G3DSA:3.40.50.1820 2 490 3.2E-130 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006495 c219425fefed5bba3b6521515759a04c 498 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 75 85 - T 11-10-2018 IPR019819 Carboxylesterase type B, conserved site ABE28_006495 c219425fefed5bba3b6521515759a04c 498 Pfam PF00135 Carboxylesterase family 5 475 3.9E-101 T 11-10-2018 IPR002018 Carboxylesterase, type B ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 54 90 4.0E-11 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 SUPERFAMILY SSF54736 48 119 2.27E-25 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 53 119 3.6E-31 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 119 5.9E-51 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 2 47 8.3E-22 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 Gene3D G3DSA:3.30.1390.10 49 119 1.4E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 Gene3D G3DSA:1.20.5.710 1 48 8.7E-24 T 11-10-2018 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 1 119 25.619 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000535 53f84dcbbb2def8237c25a4a25cc30bc 119 SUPERFAMILY SSF48300 1 55 1.83E-17 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 219 301 5.9E-10 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 SUPERFAMILY SSF52540 5 195 5.83E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 Gene3D G3DSA:3.40.50.300 1 201 3.1E-49 T 11-10-2018 ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 SUPERFAMILY SSF90002 219 301 1.22E-8 T 11-10-2018 ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 SMART SM00833 218 303 4.0E-6 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_013125 a66d2a38cecad66f5e46937294881ca9 308 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 181 5.1E-43 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 Pfam PF00990 Diguanylate cyclase, GGDEF domain 352 509 4.1E-42 T 11-10-2018 IPR000160 GGDEF domain ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 348 512 2.9E-47 T 11-10-2018 IPR000160 GGDEF domain ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 SUPERFAMILY SSF55785 245 349 5.65E-7 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 Gene3D G3DSA:3.30.70.270 343 516 1.1E-52 T 11-10-2018 ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 Gene3D G3DSA:3.30.450.20 236 342 1.9E-12 T 11-10-2018 ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 SMART SM00267 341 513 1.7E-59 T 11-10-2018 IPR000160 GGDEF domain ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 SUPERFAMILY SSF55073 357 515 5.18E-43 T 11-10-2018 IPR029787 Nucleotide cyclase ABE28_010270 1b3defe580a5b2aa1d60e4683b2ec038 525 Pfam PF16927 N-terminal 7TM region of histidine kinase 12 233 2.1E-42 T 11-10-2018 IPR031621 Histidine kinase, N-terminal 7TM region ABE28_004620 5a4b2be8b16b4209c935d87fddfd54b0 1393 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 446 1063 8.0E-6 T 11-10-2018 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 PRINTS PR00344 Bacterial sensor protein C-terminal signature 486 504 1.2E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 SUPERFAMILY SSF55874 410 522 4.98E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 SUPERFAMILY SSF55890 328 373 7.06E-11 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 SUPERFAMILY SSF103190 36 167 3.26E-35 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Gene3D G3DSA:3.30.450.20 198 311 1.8E-23 T 11-10-2018 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Pfam PF17203 Single cache domain 3 35 166 3.0E-22 T 11-10-2018 IPR033463 Single cache domain 3 ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 370 1.1E-9 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 SUPERFAMILY SSF55785 216 309 3.81E-8 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 SMART SM00387 416 525 1.6E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 524 1.8E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Gene3D G3DSA:3.30.565.10 370 523 5.9E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018110 6abce7fc18d755e96e8793175a82ae32 528 Gene3D G3DSA:3.30.450.20 30 163 4.3E-42 T 11-10-2018 ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 1.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 Pfam PF00106 short chain dehydrogenase 5 195 4.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 Gene3D G3DSA:3.40.50.720 2 241 1.7E-41 T 11-10-2018 ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_009630 038152b3e6d2a4e3125e9e626da56253 255 SUPERFAMILY SSF51735 5 227 1.59E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.367 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 Pfam PF00410 Ribosomal protein S8 5 132 5.4E-55 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 SUPERFAMILY SSF56047 2 132 1.83E-49 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 Gene3D G3DSA:3.30.1370.30 4 74 1.1E-33 T 11-10-2018 ABE28_000655 e6b2aa64507b8c5ae5774de53cac851a 132 Gene3D G3DSA:3.30.1490.10 75 132 2.0E-26 T 11-10-2018 ABE28_016740 2e2db8c6be1ab8142108e7552bcd70d4 86 Pfam PF05164 Cell division protein ZapA 10 82 8.9E-17 T 11-10-2018 IPR007838 Cell division protein ZapA-like ABE28_016740 2e2db8c6be1ab8142108e7552bcd70d4 86 SUPERFAMILY SSF102829 10 83 3.92E-19 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 12 189 4.6E-59 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PIRSF PIRSF000110 1 492 1.3E-182 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 8.1E-192 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 SUPERFAMILY SSF51735 8 192 8.46E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 Gene3D G3DSA:3.30.360.10 178 491 4.2E-121 T 11-10-2018 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 179 185 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 SUPERFAMILY SSF55347 184 489 4.25E-112 T 11-10-2018 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 Gene3D G3DSA:3.40.50.720 5 177 2.1E-57 T 11-10-2018 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 8 490 84.678 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 192 488 3.0E-112 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 239 255 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 169 197 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 330 356 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 145 158 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_014775 fbdf203d9ee0077ae58a93a1a3a28fe3 499 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 221 238 4.5E-46 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 ABE28_006180 f618da0e9b8bd3be010a1073f752ebec 134 SUPERFAMILY SSF46458 7 123 2.52E-36 T 11-10-2018 IPR009050 Globin-like superfamily ABE28_006180 f618da0e9b8bd3be010a1073f752ebec 134 Gene3D G3DSA:1.10.490.10 1 131 2.2E-48 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABE28_006180 f618da0e9b8bd3be010a1073f752ebec 134 Pfam PF01152 Bacterial-like globin 9 121 3.3E-27 T 11-10-2018 IPR001486 Truncated hemoglobin GO:0019825 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 SMART SM01209 101 293 3.6E-130 T 11-10-2018 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 2.5E-31 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 418 41.706 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Gene3D G3DSA:3.30.470.20 189 324 3.0E-58 T 11-10-2018 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Gene3D G3DSA:3.90.600.10 325 422 1.3E-28 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 416 2.8E-22 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 4.0E-83 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 SMART SM01210 325 418 5.5E-38 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 SUPERFAMILY SSF52440 1 101 6.47E-32 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001940 f28051329f038d91c6e912d9076628f1 423 SUPERFAMILY SSF56059 102 320 9.55E-64 T 11-10-2018 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 SUPERFAMILY SSF51246 324 418 1.02E-26 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Gene3D G3DSA:3.40.50.20 2 93 2.6E-32 T 11-10-2018 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 418 2.1E-159 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001940 f28051329f038d91c6e912d9076628f1 423 Gene3D G3DSA:3.30.1490.20 119 188 5.9E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 178 202 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 138 158 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 203 227 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 243 260 6.0E-46 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 Gene3D G3DSA:3.40.50.720 1 192 9.0E-64 T 11-10-2018 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 PIRSF PIRSF000114 1 337 2.1E-114 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 Gene3D G3DSA:1.10.1040.10 194 340 5.4E-55 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 SUPERFAMILY SSF48179 185 337 6.29E-61 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 327 39.009 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 7 165 4.9E-52 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 185 325 2.0E-56 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 SUPERFAMILY SSF51735 8 183 4.42E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014330 7da48d323e362ffda876d1b8722bb6ca 348 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 193 214 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Gene3D G3DSA:3.40.50.620 32 570 1.2E-272 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 1.5E-68 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 767 1.4E-20 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Gene3D G3DSA:1.10.730.10 617 721 1.0E-12 T 11-10-2018 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Gene3D G3DSA:2.30.210.10 571 587 1.2E-272 T 11-10-2018 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 SUPERFAMILY SSF50677 224 410 1.67E-54 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 SUPERFAMILY SSF47323 617 803 3.55E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 SUPERFAMILY SSF52374 3 623 6.26E-143 T 11-10-2018 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 602 4.5E-20 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 1.4E-17 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Gene3D G3DSA:3.90.740.10 226 410 1.2E-272 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Gene3D G3DSA:3.10.20.590 744 803 9.5E-21 T 11-10-2018 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.121 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 484 502 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_020615 99fe3627ae9cccb1c301f7e6158d6c48 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 1.1E-57 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 ABE28_018095 b7ab9e86096a5866c279ee036a3c0b81 430 Pfam PF03600 Citrate transporter 14 375 5.1E-47 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABE28_018095 b7ab9e86096a5866c279ee036a3c0b81 430 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 7.2E-191 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 ABE28_007270 7d35334cb69c5ab78b50f41a8e218c09 66 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 1 56 4.2E-31 T 11-10-2018 IPR019241 Protein of unknown function DUF2197 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 SUPERFAMILY SSF53659 1 325 4.93E-107 T 11-10-2018 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 Gene3D G3DSA:3.40.718.10 1 329 5.1E-139 T 11-10-2018 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 329 152.028 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 327 1.5E-131 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 PIRSF PIRSF002465 1 329 6.4E-130 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 ABE28_007780 6d29b3b98d39453cb84914682a587eb8 329 Pfam PF02504 Fatty acid synthesis protein 1 318 4.2E-124 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 SUPERFAMILY SSF47384 185 259 1.77E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 301 403 2.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 Gene3D G3DSA:1.10.287.130 178 253 5.5E-19 T 11-10-2018 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 SUPERFAMILY SSF55874 247 403 6.42E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 SMART SM00387 299 405 1.3E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 SMART SM00388 192 258 1.7E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 Pfam PF00512 His Kinase A (phospho-acceptor) domain 193 257 3.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 402 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 383 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 350 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003770 d42945f7680b81b427a342b51739c6eb 408 Gene3D G3DSA:3.30.565.10 254 403 2.9E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018445 f82f21ade40b7e73ff7de6a8a442cb8d 220 Gene3D G3DSA:3.40.1080.10 4 216 1.2E-88 T 11-10-2018 ABE28_018445 f82f21ade40b7e73ff7de6a8a442cb8d 220 SMART SM00882 9 205 1.1E-60 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018445 f82f21ade40b7e73ff7de6a8a442cb8d 220 SUPERFAMILY SSF100950 6 216 3.14E-68 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_018445 f82f21ade40b7e73ff7de6a8a442cb8d 220 Pfam PF01144 Coenzyme A transferase 10 204 1.2E-37 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018445 f82f21ade40b7e73ff7de6a8a442cb8d 220 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 8 212 5.1E-94 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 SUPERFAMILY SSF50331 239 352 7.37E-9 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 SMART SM00382 28 211 2.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 Pfam PF08402 TOBE domain 278 352 2.9E-9 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 Gene3D G3DSA:2.40.50.940 222 352 4.5E-10 T 11-10-2018 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 Gene3D G3DSA:2.40.50.140 284 345 4.5E-10 T 11-10-2018 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 Gene3D G3DSA:3.40.50.300 4 221 6.9E-63 T 11-10-2018 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 Pfam PF00005 ABC transporter 19 161 1.2E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_019335 fa32fca08cd917f11fd549c0a5e883ab 354 SUPERFAMILY SSF52540 4 241 4.34E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 SUPERFAMILY SSF53850 88 284 2.64E-27 T 11-10-2018 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 Pfam PF03466 LysR substrate binding domain 87 283 1.2E-29 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 61 1.4E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 Gene3D G3DSA:3.40.190.290 82 283 5.9E-72 T 11-10-2018 ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 SUPERFAMILY SSF46785 2 111 5.44E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004185 18f68f0d9b43a7ba5c559bf9a5e95907 287 Gene3D G3DSA:1.10.10.10 1 81 1.6E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 Pfam PF00561 alpha/beta hydrolase fold 20 253 2.3E-28 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 Gene3D G3DSA:3.40.50.1820 6 268 6.7E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 19 267 3.6E-86 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 SUPERFAMILY SSF53474 6 268 2.68E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 104 117 1.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 1.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 44 59 1.0E-7 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_020805 fcc3217751f004a5ecfa728fab0f77a2 269 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 267 36.519 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 155 170 4.5E-19 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 31 46 4.5E-19 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 57 69 4.5E-19 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 142 154 4.5E-19 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 Gene3D G3DSA:2.40.100.10 140 196 4.8E-14 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 18 193 8.0E-49 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 SUPERFAMILY SSF50891 17 196 1.07E-61 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 Gene3D G3DSA:2.40.100.10 3 135 7.3E-50 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PIRSF PIRSF001467 6 128 1.6E-43 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABE28_021435 e117e8bb7412b1095c768a307ca7aa4b 196 PIRSF PIRSF001467 130 195 4.8E-11 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF12729 Four helix bundle sensory module for signal transduction 4 180 3.6E-15 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Gene3D G3DSA:1.20.1480.50 166 266 1.3E-7 T 11-10-2018 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF00072 Response regulator receiver domain 815 927 1.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 685 699 9.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 720 738 9.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 703 713 9.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 PRINTS PR00344 Bacterial sensor protein C-terminal signature 744 757 9.3E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF00672 HAMP domain 207 257 1.9E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SUPERFAMILY SSF47384 507 589 2.75E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SUPERFAMILY SSF55874 577 759 1.03E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SUPERFAMILY SSF55781 266 429 1.32E-21 T 11-10-2018 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Gene3D G3DSA:3.30.565.10 587 760 1.4E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SMART SM00387 635 760 7.4E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF00512 His Kinase A (phospho-acceptor) domain 521 586 1.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Gene3D G3DSA:3.40.50.12740 812 933 4.7E-44 T 11-10-2018 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Gene3D G3DSA:3.30.450.40 277 432 5.9E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SMART SM00448 813 927 2.3E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 635 757 1.4E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Gene3D G3DSA:1.10.287.130 484 586 1.5E-25 T 11-10-2018 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SMART SM00388 520 588 4.7E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SUPERFAMILY SSF52172 812 931 9.96E-40 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SUPERFAMILY SSF158472 208 258 3.01E-5 T 11-10-2018 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 Pfam PF13185 GAF domain 292 428 3.2E-13 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SMART SM00304 207 261 1.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_001250 dbf5c78fc915eff68be58d6dc1e2e685 933 SMART SM00065 292 438 0.0058 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_004690 196d6c712137edb53cd97dede85f479f 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004690 196d6c712137edb53cd97dede85f479f 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 4.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004690 196d6c712137edb53cd97dede85f479f 225 SMART SM00895 95 219 4.6E-17 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004690 196d6c712137edb53cd97dede85f479f 225 Gene3D G3DSA:1.20.120.530 90 223 1.0E-21 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004690 196d6c712137edb53cd97dede85f479f 225 Pfam PF07729 FCD domain 95 218 1.2E-19 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004690 196d6c712137edb53cd97dede85f479f 225 Gene3D G3DSA:1.10.10.10 9 78 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004690 196d6c712137edb53cd97dede85f479f 225 SUPERFAMILY SSF48008 92 223 8.89E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004690 196d6c712137edb53cd97dede85f479f 225 SUPERFAMILY SSF46785 5 78 3.54E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004690 196d6c712137edb53cd97dede85f479f 225 SMART SM00345 15 74 3.9E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004690 196d6c712137edb53cd97dede85f479f 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 2.7E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 SUPERFAMILY SSF46785 2 76 2.08E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 Gene3D G3DSA:1.10.10.10 1 76 2.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 Gene3D G3DSA:3.30.450.40 77 251 4.7E-62 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 SMART SM00346 2 92 2.4E-27 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 Pfam PF01614 Bacterial transcriptional regulator 120 244 5.1E-38 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 SUPERFAMILY SSF55781 60 249 2.16E-52 T 11-10-2018 ABE28_005005 ffb7d8f9f17e309b6340c3b0d9ca0f61 251 Pfam PF09339 IclR helix-turn-helix domain 4 55 1.4E-15 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_010725 079d19378c6f21a79fd5c924dfb2ca8f 143 Pfam PF03061 Thioesterase superfamily 18 102 5.9E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_010725 079d19378c6f21a79fd5c924dfb2ca8f 143 Gene3D G3DSA:3.10.129.10 3 128 2.9E-35 T 11-10-2018 ABE28_010725 079d19378c6f21a79fd5c924dfb2ca8f 143 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 10 122 1.5E-32 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABE28_010725 079d19378c6f21a79fd5c924dfb2ca8f 143 SUPERFAMILY SSF54637 3 133 2.39E-38 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_010725 079d19378c6f21a79fd5c924dfb2ca8f 143 PIRSF PIRSF003230 3 140 7.0E-31 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 Pfam PF06725 3D domain 126 184 2.1E-19 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 SUPERFAMILY SSF54106 27 70 5.1E-14 T 11-10-2018 ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 SUPERFAMILY SSF50685 125 172 2.06E-7 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 SMART SM00257 28 71 1.7E-18 T 11-10-2018 IPR018392 LysM domain ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 Gene3D G3DSA:3.10.350.10 24 78 3.9E-22 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_002460 d0c0f98bb9ab117f8566980f42ada268 186 Pfam PF01476 LysM domain 29 70 1.5E-16 T 11-10-2018 IPR018392 LysM domain ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 Pfam PF00202 Aminotransferase class-III 29 443 4.3E-117 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 Gene3D G3DSA:3.90.1150.10 10 446 6.2E-164 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 14 446 3.3E-161 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 PIRSF PIRSF000521 21 449 1.0E-38 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 2 449 51.175 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 SUPERFAMILY SSF53383 9 448 1.89E-130 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 254 291 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_020435 725ac2d10ab7c53480b4eafe42fbbdaa 460 Gene3D G3DSA:3.40.640.10 64 344 6.2E-164 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_017695 ecc742b66bddb09498ea290b7f17a96b 179 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 12 164 7.5E-19 T 11-10-2018 IPR025847 MEDS domain ABE28_010635 1423759ba1ad713733c5e53db1595a5d 250 Gene3D G3DSA:3.30.200.20 9 99 4.4E-24 T 11-10-2018 ABE28_010635 1423759ba1ad713733c5e53db1595a5d 250 Gene3D G3DSA:1.10.510.10 100 246 1.1E-15 T 11-10-2018 ABE28_010635 1423759ba1ad713733c5e53db1595a5d 250 SUPERFAMILY SSF56112 6 194 5.26E-45 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_010635 1423759ba1ad713733c5e53db1595a5d 250 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 21 44 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ABE28_010635 1423759ba1ad713733c5e53db1595a5d 250 Pfam PF00069 Protein kinase domain 15 167 8.0E-34 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 SUPERFAMILY SSF51366 2 233 2.04E-69 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 5 226 1.6E-61 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 226 2.2E-45 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 SMART SM00934 4 229 6.5E-88 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 Gene3D G3DSA:3.20.20.70 1 237 4.0E-80 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007645 bda15e397ea18df6248d8d4ddf3e5c39 238 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 38.324 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 Pfam PF00512 His Kinase A (phospho-acceptor) domain 141 206 1.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 362 7.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 SUPERFAMILY SSF55874 197 362 1.83E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 SUPERFAMILY SSF47384 127 208 1.28E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 SMART SM00304 81 133 0.0052 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 Gene3D G3DSA:3.30.565.10 210 366 1.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 SMART SM00388 141 208 6.8E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 348 361 8.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 318 8.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 8.0E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 Gene3D G3DSA:1.10.287.130 79 204 1.6E-20 T 11-10-2018 ABE28_008600 53f661723bdad699f7fe6b3fe1f88fd4 374 SMART SM00387 253 364 2.0E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 572 57.658 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 SUPERFAMILY SSF56014 146 345 4.06E-58 T 11-10-2018 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 480 496 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 SUPERFAMILY SSF55124 13 145 6.38E-33 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 331 2.7E-46 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 2.8E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 PRINTS PR00397 Sirohaem Fe-binding site signature 480 498 2.8E-8 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 432 560 0.054 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 561 4.7E-280 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Gene3D G3DSA:3.30.413.10 428 569 6.1E-36 T 11-10-2018 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 SUPERFAMILY SSF55124 347 423 1.64E-21 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 9.3E-15 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 136 9.0E-15 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010915 ecc9f78d5a4d9fb9fe957f35cf8acee6 572 SUPERFAMILY SSF56014 430 562 3.79E-33 T 11-10-2018 ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 Hamap MF_00469 UPF0176 protein YceA [yceA]. 4 268 39.072 T 11-10-2018 IPR020936 Uncharacterised protein family UPF0176 ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 SUPERFAMILY SSF52821 89 247 1.78E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 Pfam PF12368 Rhodanase C-terminal 223 289 4.3E-15 T 11-10-2018 IPR022111 Rhodanase, C-terminal ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 Pfam PF00581 Rhodanese-like domain 117 211 4.2E-9 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 Gene3D G3DSA:3.40.250.10 103 250 2.3E-43 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 SMART SM00450 116 217 3.1E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_005265 7b183c59b1f682e84f3238eea9f0e9a4 321 Gene3D G3DSA:3.30.70.100 1 98 1.2E-29 T 11-10-2018 ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 Gene3D G3DSA:3.30.390.10 11 357 5.2E-127 T 11-10-2018 IPR029017 Enolase-like, N-terminal ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 Gene3D G3DSA:3.20.20.120 118 346 5.2E-127 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 SUPERFAMILY SSF51604 120 361 6.29E-62 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 8 125 2.0E-11 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 SUPERFAMILY SSF54826 1 126 1.11E-29 T 11-10-2018 ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 SMART SM00922 142 234 3.2E-19 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 1 359 42.414 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 13 332 1.9E-114 T 11-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 ABE28_020790 a6d2fdc40e11622aab4891478d415d80 367 Pfam PF13378 Enolase C-terminal domain-like 147 354 7.5E-43 T 11-10-2018 IPR029065 Enolase C-terminal domain-like ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 29 225 5.3E-13 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 14 243 28.648 T 11-10-2018 IPR014244 RNA polymerase sigma-I type ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 Pfam PF04542 Sigma-70 region 2 34 103 9.0E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 19 241 2.0E-79 T 11-10-2018 IPR014244 RNA polymerase sigma-I type ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 SUPERFAMILY SSF88946 21 102 4.24E-17 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 Gene3D G3DSA:1.10.10.10 54 164 1.9E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006800 515f66b9746afb83d4bc402ce186a81e 247 PIRSF PIRSF038953 7 246 2.2E-67 T 11-10-2018 IPR014244 RNA polymerase sigma-I type ABE28_021560 219060d115c490886202bf4983e52798 160 Gene3D G3DSA:3.90.79.10 10 140 2.3E-25 T 11-10-2018 ABE28_021560 219060d115c490886202bf4983e52798 160 SUPERFAMILY SSF55811 7 119 2.71E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_021560 219060d115c490886202bf4983e52798 160 ProSitePatterns PS00893 Nudix box signature. 42 63 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABE28_021560 219060d115c490886202bf4983e52798 160 Pfam PF00293 NUDIX domain 10 119 3.9E-15 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_021560 219060d115c490886202bf4983e52798 160 PRINTS PR00502 NUDIX hydrolase family signature 37 51 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_021560 219060d115c490886202bf4983e52798 160 PRINTS PR00502 NUDIX hydrolase family signature 51 66 3.2E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 SUPERFAMILY SSF103491 1 421 2.48E-131 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 Pfam PF00344 SecY translocase 68 414 3.8E-115 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 426 3.6E-150 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 430 29.401 T 11-10-2018 IPR026593 Protein translocase subunit SecY ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PIRSF PIRSF004557 1 431 3.0E-130 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 399 417 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 365 383 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 310 332 1.1E-100 T 11-10-2018 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000685 f2d9bbdbdcab3e602a78f00d596269e1 431 Gene3D G3DSA:1.10.3370.10 1 426 4.2E-160 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_012880 c13c214515b90529e45aceb7a873b8d9 173 SUPERFAMILY SSF55729 1 144 2.23E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_012880 c13c214515b90529e45aceb7a873b8d9 173 Pfam PF00583 Acetyltransferase (GNAT) family 52 140 1.8E-12 T 11-10-2018 IPR000182 GNAT domain ABE28_012880 c13c214515b90529e45aceb7a873b8d9 173 Gene3D G3DSA:3.40.630.30 1 168 2.9E-37 T 11-10-2018 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Pfam PF00271 Helicase conserved C-terminal domain 422 518 6.8E-10 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Pfam PF13091 PLD-like domain 24 153 7.8E-14 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Pfam PF11907 Domain of unknown function (DUF3427) 671 933 4.7E-63 T 11-10-2018 IPR021835 Protein of unknown function DUF3427 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 SMART SM00487 190 368 5.8E-18 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Gene3D G3DSA:3.40.50.300 176 356 1.8E-46 T 11-10-2018 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 SUPERFAMILY SSF56024 11 157 5.5E-12 T 11-10-2018 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Gene3D G3DSA:3.40.50.300 385 562 2.9E-36 T 11-10-2018 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 SMART SM00490 437 520 7.4E-11 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Pfam PF04851 Type III restriction enzyme, res subunit 194 341 2.8E-35 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 SUPERFAMILY SSF52540 239 542 2.4E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018695 206b5fc1a0defa4c36c1831bcb4b1640 936 Gene3D G3DSA:3.30.870.10 8 173 4.0E-35 T 11-10-2018 ABE28_010450 eadedea1bf9a69ddf8d53836cca280bd 199 SUPERFAMILY SSF55469 4 198 4.71E-70 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_010450 eadedea1bf9a69ddf8d53836cca280bd 199 Gene3D G3DSA:3.40.109.10 3 199 2.8E-89 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_010450 eadedea1bf9a69ddf8d53836cca280bd 199 Pfam PF00881 Nitroreductase family 9 178 3.8E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 Pfam PF12796 Ankyrin repeats (3 copies) 43 134 1.4E-19 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 SUPERFAMILY SSF48403 12 163 3.11E-28 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 PRINTS PR01415 Ankyrin repeat signature 120 134 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 PRINTS PR01415 Ankyrin repeat signature 39 54 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 104 133 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 38 67 0.053 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 72 101 2.9 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018735 b831a5fe84777e3238ddfbd3c11fa8e4 169 Gene3D G3DSA:1.25.40.20 1 169 4.7E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 Pfam PF12796 Ankyrin repeats (3 copies) 43 134 1.4E-19 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 SUPERFAMILY SSF48403 12 163 3.11E-28 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 PRINTS PR01415 Ankyrin repeat signature 120 134 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 PRINTS PR01415 Ankyrin repeat signature 39 54 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 104 133 8.4E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 38 67 0.053 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 SMART SM00248 72 101 2.9 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018775 b831a5fe84777e3238ddfbd3c11fa8e4 169 Gene3D G3DSA:1.25.40.20 1 169 4.7E-31 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018840 755fd35ba3aaa571e56ec86f5e68af7c 303 Pfam PF00892 EamA-like transporter family 5 134 4.1E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_018840 755fd35ba3aaa571e56ec86f5e68af7c 303 Pfam PF00892 EamA-like transporter family 148 283 3.0E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_018840 755fd35ba3aaa571e56ec86f5e68af7c 303 SUPERFAMILY SSF103481 36 139 6.8E-13 T 11-10-2018 ABE28_018840 755fd35ba3aaa571e56ec86f5e68af7c 303 SUPERFAMILY SSF103481 186 286 5.49E-5 T 11-10-2018 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 5 557 6.7E-152 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 6 81 3.7E-13 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 SMART SM00836 445 557 3.0E-27 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 SMART SM01016 3 82 6.8E-18 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Pfam PF00750 tRNA synthetases class I (R) 92 430 3.1E-100 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Gene3D G3DSA:1.10.730.10 439 557 2.9E-28 T 11-10-2018 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Gene3D G3DSA:3.30.1360.70 1 103 7.7E-25 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 SUPERFAMILY SSF47323 439 557 6.87E-26 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 150 163 7.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 111 126 7.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 126 142 7.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 PRINTS PR01038 Arginyl-tRNA synthetase signature 292 313 7.4E-22 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 SUPERFAMILY SSF52374 109 439 6.57E-97 T 11-10-2018 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Pfam PF05746 DALR anticodon binding domain 445 557 1.6E-23 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 SUPERFAMILY SSF55190 5 103 7.32E-19 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Gene3D G3DSA:3.40.50.620 107 438 4.9E-127 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_019905 7ee6405e294a75d5186cd90d8a04e30d 557 Hamap MF_00123 Arginine--tRNA ligase [argS]. 7 557 24.557 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 SMART SM00345 17 76 6.3E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 SUPERFAMILY SSF64288 64 242 4.24E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 Gene3D G3DSA:1.10.10.10 9 76 4.8E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 SMART SM00866 98 237 3.6E-28 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 Pfam PF07702 UTRA domain 98 237 8.4E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 SUPERFAMILY SSF46785 4 80 2.15E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 5.0E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009815 78191c4aebd1ea8c9653c36c6bc756ce 244 Gene3D G3DSA:3.40.1410.10 83 244 1.3E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 5.2E-45 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 5.2E-45 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 5.2E-45 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 5.2E-45 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 5.2E-45 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 2.1E-46 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_017830 985c06250399544d11a52aa0ca6681e9 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 4.0E-39 T 11-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 166 194 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 1.2E-81 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 172 2.8E-51 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABE28_001670 823a6336049adf4c085578a23c09592d 467 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 SUPERFAMILY SSF48179 175 466 1.22E-119 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_001670 823a6336049adf4c085578a23c09592d 467 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 177 466 2.9E-123 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 SMART SM01350 177 467 1.3E-192 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 7.0E-223 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 Gene3D G3DSA:1.20.5.320 435 467 2.3E-17 T 11-10-2018 ABE28_001670 823a6336049adf4c085578a23c09592d 467 Gene3D G3DSA:1.10.1040.10 179 434 2.1E-101 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_001670 823a6336049adf4c085578a23c09592d 467 PIRSF PIRSF000109 1 467 1.1E-225 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_001670 823a6336049adf4c085578a23c09592d 467 SUPERFAMILY SSF51735 4 175 6.49E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_001670 823a6336049adf4c085578a23c09592d 467 Gene3D G3DSA:3.40.50.720 2 178 2.0E-56 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 Gene3D G3DSA:3.10.150.10 1 250 6.0E-135 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 Gene3D G3DSA:3.70.10.10 145 375 6.0E-135 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 PIRSF PIRSF000804 1 378 8.2E-117 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 SMART SM00480 17 373 2.2E-160 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 SUPERFAMILY SSF55979 133 251 8.8E-29 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 SUPERFAMILY SSF55979 1 127 8.79E-24 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 2.7E-39 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 3.1E-34 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 251 6.0E-38 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 SUPERFAMILY SSF55979 254 377 2.93E-29 T 11-10-2018 ABE28_023810 862f5792ba50096af2d134853eb1a41b 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 6.7E-122 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 Pfam PF00440 Bacterial regulatory proteins, tetR family 234 272 1.9E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 69 4.1E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 Gene3D G3DSA:1.10.357.10 215 388 2.9E-28 T 11-10-2018 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 SUPERFAMILY SSF46689 215 282 2.98E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 Gene3D G3DSA:1.10.357.10 13 200 1.7E-25 T 11-10-2018 ABE28_017550 523f05d21fb219b090d87049eb088da4 399 SUPERFAMILY SSF46689 17 79 2.0E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_010050 8b5dc0b6ed8fd3addf63c2309baacabf 101 Pfam PF11514 Protein of unknown function (DUF3219) 5 99 4.0E-29 T 11-10-2018 IPR021596 Protein of unknown function DUF3219 ABE28_010050 8b5dc0b6ed8fd3addf63c2309baacabf 101 SUPERFAMILY SSF159173 4 100 3.53E-29 T 11-10-2018 IPR023105 YkvR-like superfamily ABE28_010050 8b5dc0b6ed8fd3addf63c2309baacabf 101 Gene3D G3DSA:2.40.30.80 1 97 9.6E-33 T 11-10-2018 IPR023105 YkvR-like superfamily ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 SUPERFAMILY SSF54211 592 767 1.63E-57 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 TIGRFAM TIGR00763 lon: endopeptidase La 9 768 5.4E-304 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Gene3D G3DSA:1.20.58.1480 118 242 1.0E-42 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Gene3D G3DSA:3.30.230.10 590 773 7.2E-87 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 SUPERFAMILY SSF88697 8 198 6.21E-45 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 SMART SM00382 345 490 1.9E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 567 769 5.8E-98 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 353 372 6.3E-53 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 670 689 6.3E-53 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 723 741 6.3E-53 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 700 719 6.3E-53 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 592 608 6.3E-53 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 349 486 1.5E-23 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 SMART SM00464 7 199 2.9E-67 T 11-10-2018 IPR003111 Lon, substrate-binding domain ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 673 681 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 8 198 1.4E-41 T 11-10-2018 IPR003111 Lon, substrate-binding domain ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Gene3D G3DSA:2.30.130.40 4 114 8.9E-27 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Hamap MF_01973 Lon protease [lon]. 8 769 71.809 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 SUPERFAMILY SSF52540 299 587 7.1E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 PIRSF PIRSF001174 1 772 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Gene3D G3DSA:1.10.8.60 489 581 1.6E-32 T 11-10-2018 ABE28_016485 43394b09a3427d5c052d888c5e5ec749 773 Gene3D G3DSA:3.40.50.300 310 488 4.1E-68 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 SUPERFAMILY SSF55874 521 682 3.41E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011705 655761224275abf5102ab16634c7e728 697 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 54 270 2.2E-41 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_011705 655761224275abf5102ab16634c7e728 697 SMART SM00091 339 406 0.0014 T 11-10-2018 IPR000014 PAS domain ABE28_011705 655761224275abf5102ab16634c7e728 697 Gene3D G3DSA:3.30.565.10 538 690 7.3E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_011705 655761224275abf5102ab16634c7e728 697 SMART SM00388 464 530 2.3E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_011705 655761224275abf5102ab16634c7e728 697 Gene3D G3DSA:3.40.190.10 55 269 2.6E-42 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 SUPERFAMILY SSF55785 326 441 2.66E-8 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_011705 655761224275abf5102ab16634c7e728 697 SMART SM00062 52 272 1.1E-39 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_011705 655761224275abf5102ab16634c7e728 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 628 638 8.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011705 655761224275abf5102ab16634c7e728 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 624 8.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011705 655761224275abf5102ab16634c7e728 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 676 8.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011705 655761224275abf5102ab16634c7e728 697 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 8.4E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_011705 655761224275abf5102ab16634c7e728 697 Gene3D G3DSA:1.10.287.130 452 528 8.8E-21 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 SUPERFAMILY SSF47384 459 528 1.0E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_011705 655761224275abf5102ab16634c7e728 697 Gene3D G3DSA:3.30.450.20 326 451 2.4E-11 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 Gene3D G3DSA:3.40.190.10 137 231 2.6E-42 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 SMART SM00387 570 679 5.6E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_011705 655761224275abf5102ab16634c7e728 697 SUPERFAMILY SSF53850 22 271 2.61E-43 T 11-10-2018 ABE28_011705 655761224275abf5102ab16634c7e728 697 Pfam PF00512 His Kinase A (phospho-acceptor) domain 464 526 7.6E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_011705 655761224275abf5102ab16634c7e728 697 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 573 678 4.7E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003170 593936c85036100c28374bc985b9fc0c 137 SUPERFAMILY SSF143100 5 69 1.28E-18 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like ABE28_003170 593936c85036100c28374bc985b9fc0c 137 Gene3D G3DSA:3.30.160.250 2 96 9.2E-28 T 11-10-2018 ABE28_003170 593936c85036100c28374bc985b9fc0c 137 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 16 123 2.3E-15 T 11-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system ABE28_008680 d65926b58f742b1d9f3dc65137cf0971 115 Gene3D G3DSA:1.20.58.280 1 107 1.1E-37 T 11-10-2018 ABE28_008680 d65926b58f742b1d9f3dc65137cf0971 115 PIRSF PIRSF000699 1 107 5.7E-38 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_008680 d65926b58f742b1d9f3dc65137cf0971 115 SUPERFAMILY SSF46973 1 101 2.35E-36 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 ABE28_008680 d65926b58f742b1d9f3dc65137cf0971 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 100 2.4E-36 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 Gene3D G3DSA:3.60.15.10 118 355 3.2E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 SMART SM00450 7 109 1.0E-12 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 SMART SM00849 130 294 3.2E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 SUPERFAMILY SSF56281 124 349 1.35E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 SUPERFAMILY SSF52821 2 110 7.33E-17 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 Pfam PF00581 Rhodanese-like domain 8 105 4.6E-7 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 Pfam PF00753 Metallo-beta-lactamase superfamily 130 294 4.2E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_010165 dc84b37f164515cb520c46b707c858e8 375 Gene3D G3DSA:3.40.250.10 2 111 2.4E-16 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_005635 e98a1970174ca103f5b06582ddf34f2b 263 Pfam PF00378 Enoyl-CoA hydratase/isomerase 19 262 6.7E-56 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_005635 e98a1970174ca103f5b06582ddf34f2b 263 SUPERFAMILY SSF52096 6 263 5.77E-70 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005635 e98a1970174ca103f5b06582ddf34f2b 263 Gene3D G3DSA:3.90.226.10 1 202 9.8E-56 T 11-10-2018 ABE28_005635 e98a1970174ca103f5b06582ddf34f2b 263 Gene3D G3DSA:1.10.12.10 206 263 2.6E-18 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 81 437 3.1E-79 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 SUPERFAMILY SSF53850 37 511 1.69E-108 T 11-10-2018 ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 Gene3D G3DSA:3.10.105.10 275 489 3.0E-105 T 11-10-2018 ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 Gene3D G3DSA:3.90.76.10 70 185 3.0E-105 T 11-10-2018 ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 Gene3D G3DSA:3.40.190.10 67 500 3.0E-105 T 11-10-2018 ABE28_004245 2363e3feca831b183769fc9f5a378cbb 528 PIRSF PIRSF002741 1 515 1.0E-86 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_020125 0ba61996fc680394a25f8a3209c1f33e 299 SUPERFAMILY SSF103481 186 290 5.23E-12 T 11-10-2018 ABE28_020125 0ba61996fc680394a25f8a3209c1f33e 299 Pfam PF00892 EamA-like transporter family 152 285 1.8E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_020125 0ba61996fc680394a25f8a3209c1f33e 299 Pfam PF00892 EamA-like transporter family 7 139 1.6E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_020125 0ba61996fc680394a25f8a3209c1f33e 299 SUPERFAMILY SSF103481 40 142 4.71E-15 T 11-10-2018 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 8.0E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 SUPERFAMILY SSF88659 139 225 8.94E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 PIRSF PIRSF000770 4 240 6.7E-89 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 PRINTS PR00046 Major sigma-70 factor signature 212 223 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 PRINTS PR00046 Major sigma-70 factor signature 176 188 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 PRINTS PR00046 Major sigma-70 factor signature 197 212 1.5E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 Pfam PF04545 Sigma-70, region 4 173 223 1.1E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 SUPERFAMILY SSF88946 9 122 1.83E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 4 228 3.3E-113 T 11-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 Pfam PF04542 Sigma-70 region 2 54 123 4.7E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 Gene3D G3DSA:1.10.10.10 154 235 2.6E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015650 41ff41b2cf32f1ef76fb0dbee686708f 240 Gene3D G3DSA:1.20.120.1810 20 123 1.3E-23 T 11-10-2018 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 2.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 2.9E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 SMART SM00345 15 72 2.4E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 Gene3D G3DSA:1.10.10.10 9 75 7.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 Gene3D G3DSA:3.40.1410.10 76 236 1.9E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 72 6.8E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 SUPERFAMILY SSF46785 4 76 1.35E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 SUPERFAMILY SSF64288 60 233 6.91E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 Pfam PF07702 UTRA domain 92 225 5.4E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_010415 4d3ad61200c246f04040280a403dfe5e 236 SMART SM00866 88 226 6.3E-24 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 263 8.1E-133 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 PIRSF PIRSF002937 1 263 4.3E-132 T 11-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 Gene3D G3DSA:1.10.10.10 146 263 2.9E-55 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 152 262 2.0E-58 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 SUPERFAMILY SSF52172 2 138 4.84E-33 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 Pfam PF00072 Response regulator receiver domain 6 119 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 Gene3D G3DSA:3.40.50.2300 1 145 5.1E-32 T 11-10-2018 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 153 256 2.8E-45 T 11-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 SMART SM00448 4 119 3.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_014900 2d79ce9c72337af9312e1ab57fb8e5f7 263 SUPERFAMILY SSF46894 147 261 1.36E-48 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_002335 b9a34832606b2ec194d380283f3f1223 278 SUPERFAMILY SSF103481 202 276 2.75E-8 T 11-10-2018 ABE28_002335 b9a34832606b2ec194d380283f3f1223 278 SUPERFAMILY SSF103481 39 136 9.15E-8 T 11-10-2018 ABE28_002335 b9a34832606b2ec194d380283f3f1223 278 Pfam PF00892 EamA-like transporter family 153 276 2.4E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_002335 b9a34832606b2ec194d380283f3f1223 278 Pfam PF00892 EamA-like transporter family 2 132 6.5E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_014205 1e434681e4c8b495299d168c85d779bb 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 7.3E-50 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABE28_014205 1e434681e4c8b495299d168c85d779bb 224 PIRSF PIRSF000032 2 224 2.2E-100 T 11-10-2018 ABE28_014205 1e434681e4c8b495299d168c85d779bb 224 SUPERFAMILY SSF81342 6 224 6.91E-60 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABE28_014205 1e434681e4c8b495299d168c85d779bb 224 Gene3D G3DSA:1.20.810.10 1 224 3.3E-86 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 ABE28_019000 55e0d14211d9ddd8a16ce694c20ba391 198 Pfam PF07875 Coat F domain 113 175 5.3E-13 T 11-10-2018 IPR012851 Spore coat protein CotF-like ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 SUPERFAMILY SSF88659 174 254 2.24E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Gene3D G3DSA:1.10.601.10 4 108 3.1E-27 T 11-10-2018 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Pfam PF04542 Sigma-70 region 2 41 107 2.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 SUPERFAMILY SSF88946 14 108 8.16E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 34 253 3.0E-88 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Gene3D G3DSA:1.10.10.10 183 255 2.2E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PIRSF PIRSF000770 12 255 4.1E-36 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PRINTS PR00046 Major sigma-70 factor signature 206 218 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PRINTS PR00046 Major sigma-70 factor signature 238 249 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PRINTS PR00046 Major sigma-70 factor signature 223 238 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PRINTS PR00046 Major sigma-70 factor signature 88 96 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 PRINTS PR00046 Major sigma-70 factor signature 64 77 5.9E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Pfam PF04539 Sigma-70 region 3 119 189 7.8E-14 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 35 252 1.1E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Gene3D G3DSA:1.10.10.10 109 162 9.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 25 253 1.3E-114 T 11-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 Pfam PF04545 Sigma-70, region 4 202 250 1.9E-15 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_014600 d4ee57b00688567482e6e4f12db0ab3f 255 SUPERFAMILY SSF88659 112 187 6.54E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 SUPERFAMILY SSF52540 820 1067 1.63E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Gene3D G3DSA:3.40.50.300 829 1026 6.4E-82 T 11-10-2018 ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 SUPERFAMILY SSF52540 598 818 1.27E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Pfam PF08455 Bacterial SNF2 helicase associated 236 609 2.5E-82 T 11-10-2018 IPR013663 Helicase, SWF/SNF/SWI type, bacterial ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 SMART SM00487 612 808 1.7E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Gene3D G3DSA:1.20.120.850 840 1062 6.4E-82 T 11-10-2018 ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Gene3D G3DSA:3.40.50.10810 585 828 3.8E-62 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 SMART SM00490 930 1012 1.7E-24 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Pfam PF00176 SNF2 family N-terminal domain 634 890 3.2E-53 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ABE28_017930 d67bb7e208a2fddf5f3f2c98c5febf27 1068 Pfam PF00271 Helicase conserved C-terminal domain 901 1012 2.7E-22 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_004015 1a6b11ecb6429c19e9af2f712e8debbe 280 SUPERFAMILY SSF53474 19 278 7.21E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004015 1a6b11ecb6429c19e9af2f712e8debbe 280 Pfam PF00561 alpha/beta hydrolase fold 37 265 3.5E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PIRSF PIRSF001369 1 371 1.6E-155 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 Gene3D G3DSA:1.10.580.10 25 351 4.5E-129 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 Gene3D G3DSA:1.10.230.10 220 318 4.5E-129 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 SUPERFAMILY SSF48256 2 371 2.22E-134 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 172 187 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 194 222 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 247 267 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 324 338 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 123 136 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 PRINTS PR00143 Citrate synthase signature 304 320 5.7E-43 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 6.2E-130 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_016960 c282da53d4ea0fccc39353d3f7ca2f0b 371 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 7.4E-164 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 SUPERFAMILY SSF53901 3 251 1.7E-75 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 SUPERFAMILY SSF53901 214 411 2.52E-75 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 4.7E-60 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 7.2E-40 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 SMART SM00825 Beta-ketoacyl synthase 6 412 1.9E-17 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 PIRSF PIRSF000447 1 412 2.0E-186 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 3.3E-200 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 Gene3D G3DSA:3.40.47.10 1 254 3.6E-104 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site ABE28_006100 cc670f8eae37a6ff45aa243b5f334100 412 Gene3D G3DSA:3.40.47.10 256 400 1.7E-55 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_016330 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 37 61 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 12 36 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 PRINTS PR00063 Ribosomal protein L27 signature 62 86 1.2E-38 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_016330 9a4b73722397235435ad827d503cb287 96 SUPERFAMILY SSF110324 10 91 2.76E-32 T 11-10-2018 ABE28_016330 9a4b73722397235435ad827d503cb287 96 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.056 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 Pfam PF01016 Ribosomal L27 protein 10 89 8.3E-35 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 1.6E-40 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016330 9a4b73722397235435ad827d503cb287 96 Gene3D G3DSA:2.40.50.100 28 93 1.3E-26 T 11-10-2018 ABE28_016330 9a4b73722397235435ad827d503cb287 96 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 5.0E-17 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 Gene3D G3DSA:3.40.190.10 40 250 9.1E-62 T 11-10-2018 ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 Gene3D G3DSA:3.40.190.10 122 215 9.1E-62 T 11-10-2018 ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 SMART SM00062 38 253 8.9E-58 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 41 252 1.7E-60 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 61 74 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 SUPERFAMILY SSF53850 3 254 2.32E-61 T 11-10-2018 ABE28_023400 71ae9b76582faea4d2520a72400ff4b1 259 SMART SM00079 38 252 4.4E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 SUPERFAMILY SSF53613 2 290 4.68E-78 T 11-10-2018 IPR029056 Ribokinase-like ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 PRINTS PR00990 Ribokinase signature 6 27 8.1E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 PRINTS PR00990 Ribokinase signature 172 187 8.1E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 PRINTS PR00990 Ribokinase signature 207 218 8.1E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 PRINTS PR00990 Ribokinase signature 104 117 8.1E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 PRINTS PR00990 Ribokinase signature 33 52 8.1E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 Hamap MF_01987 Ribokinase [rbsK]. 2 291 23.84 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 289 4.6E-102 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 Pfam PF00294 pfkB family carbohydrate kinase 3 284 4.4E-70 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_023550 eeb9bb5994c42666d44113ed1b894e12 294 Gene3D G3DSA:3.40.1190.20 1 293 4.2E-91 T 11-10-2018 IPR029056 Ribokinase-like ABE28_017180 f1556bd3319f7e10688fc70c5ed3d64d 250 Pfam PF00005 ABC transporter 22 158 1.2E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_017180 f1556bd3319f7e10688fc70c5ed3d64d 250 SUPERFAMILY SSF52540 6 224 6.62E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017180 f1556bd3319f7e10688fc70c5ed3d64d 250 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_017180 f1556bd3319f7e10688fc70c5ed3d64d 250 Gene3D G3DSA:3.40.50.300 2 221 3.5E-59 T 11-10-2018 ABE28_017180 f1556bd3319f7e10688fc70c5ed3d64d 250 SMART SM00382 31 207 6.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_021755 4bdd17272bc93fc5fb3ff3ae20f10fbc 141 SUPERFAMILY SSF46689 29 133 7.35E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_016300 4bdd17272bc93fc5fb3ff3ae20f10fbc 141 SUPERFAMILY SSF46689 29 133 7.35E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_009190 4bdd17272bc93fc5fb3ff3ae20f10fbc 141 SUPERFAMILY SSF46689 29 133 7.35E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 1.2E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 632 648 1.2E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 604 620 1.2E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 664 689 1.2E-17 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Gene3D G3DSA:3.40.1110.10 334 537 0.0 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 SUPERFAMILY SSF81653 114 223 2.35E-30 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Pfam PF00122 E1-E2 ATPase 111 304 2.1E-55 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 541 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 562 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 632 651 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 656 668 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 2.5E-40 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 SUPERFAMILY SSF56784 322 736 9.75E-65 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 SUPERFAMILY SSF81665 4 881 3.14E-135 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 598 722 6.0E-38 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 427 576 2.3E-20 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 215 346 4.6E-30 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 180 2.3E-18 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 SUPERFAMILY SSF81660 331 534 1.42E-58 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 SMART SM00831 2 76 6.1E-24 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 646 9.0E-26 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Gene3D G3DSA:3.40.50.1000 321 677 0.0 T 11-10-2018 IPR023214 HAD superfamily ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Pfam PF00689 Cation transporting ATPase, C-terminus 716 881 8.8E-51 T 11-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 882 1.9E-213 T 11-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Gene3D G3DSA:2.70.150.10 15 227 0.0 T 11-10-2018 ABE28_007660 c9f0b2ed225fe507c855525fcff59d6a 892 Pfam PF00690 Cation transporter/ATPase, N-terminus 6 71 4.0E-17 T 11-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 SUPERFAMILY SSF55874 175 323 1.7E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 Gene3D G3DSA:1.10.287.130 123 174 5.9E-29 T 11-10-2018 ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 SMART SM00387 216 326 2.8E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 325 6.1E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 Gene3D G3DSA:3.30.565.10 175 323 5.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_017590 66e2ee4fa0d1b3e884df72e8f2da3a0e 334 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 2.1E-7 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_019090 fae24a128db9fa8c6466d6a3199d2bab 409 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_019090 fae24a128db9fa8c6466d6a3199d2bab 409 Gene3D G3DSA:1.20.1250.20 17 195 4.2E-34 T 11-10-2018 ABE28_019090 fae24a128db9fa8c6466d6a3199d2bab 409 Pfam PF07690 Major Facilitator Superfamily 25 338 1.8E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_019090 fae24a128db9fa8c6466d6a3199d2bab 409 SUPERFAMILY SSF103473 9 399 3.53E-70 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019090 fae24a128db9fa8c6466d6a3199d2bab 409 Gene3D G3DSA:1.20.1250.20 215 407 1.7E-24 T 11-10-2018 ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 SMART SM00914 140 176 8.0E-9 T 11-10-2018 IPR014957 IDEAL domain ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 PIRSF PIRSF007165 2 182 1.9E-80 T 11-10-2018 IPR011188 Uncharacterised protein family UPF0302 ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 Pfam PF08858 IDEAL domain 140 176 1.9E-12 T 11-10-2018 IPR014957 IDEAL domain ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 Gene3D G3DSA:1.20.1440.290 1 124 2.7E-56 T 11-10-2018 IPR038091 UPF0302, N-terminal domain superfamily ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 Hamap MF_00760 UPF0302 protein . 3 179 32.846 T 11-10-2018 IPR011188 Uncharacterised protein family UPF0302 ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 Pfam PF08864 UPF0302 domain 10 113 2.8E-48 T 11-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal ABE28_014220 c8b116b3e5328cbb88ebc709af454ae2 183 Gene3D G3DSA:4.10.810.10 125 181 1.1E-19 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SMART SM00304 185 237 5.5E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SUPERFAMILY SSF47384 221 303 3.14E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SMART SM00388 238 304 4.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 303 8.6E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SMART SM00387 348 459 3.8E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 458 9.3E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Gene3D G3DSA:3.30.565.10 308 459 3.4E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 438 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 399 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 444 457 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 PRINTS PR00344 Bacterial sensor protein C-terminal signature 403 413 3.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Gene3D G3DSA:1.10.8.500 184 233 1.5E-12 T 11-10-2018 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Pfam PF00672 HAMP domain 185 234 1.7E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 Gene3D G3DSA:1.10.287.130 234 304 7.9E-20 T 11-10-2018 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SUPERFAMILY SSF158472 185 234 3.27E-12 T 11-10-2018 ABE28_002200 da338d47e463c71e12dd6f1fe0bc0da3 459 SUPERFAMILY SSF55874 294 458 5.76E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 Pfam PF13183 4Fe-4S dicluster domain 279 389 2.0E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 Pfam PF02754 Cysteine-rich domain 587 674 1.6E-17 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 Pfam PF02754 Cysteine-rich domain 465 543 1.4E-5 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 SUPERFAMILY SSF46548 261 405 7.5E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 282 293 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 SUPERFAMILY SSF103501 9 238 1.83E-13 T 11-10-2018 IPR036197 NarG-like superfamily ABE28_023025 9c1630289014b657367a4d68d7caf9a9 709 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 377 388 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 SUPERFAMILY SSF48150 14 232 4.55E-75 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Pfam PF14815 NUDIX domain 245 364 2.2E-19 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Gene3D G3DSA:1.10.340.30 31 142 1.6E-90 T 11-10-2018 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Pfam PF00633 Helix-hairpin-helix motif 109 138 1.7E-9 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 SMART SM00525 201 221 0.0031 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Gene3D G3DSA:1.10.1670.10 20 222 1.6E-90 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 SUPERFAMILY SSF55811 230 366 5.23E-22 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 202 218 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 SMART SM00478 49 200 6.8E-51 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 17 279 5.9E-108 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Gene3D G3DSA:3.90.79.10 239 369 4.2E-25 T 11-10-2018 ABE28_003625 cf185a6634683775edf543fdfbffbd55 370 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 45 176 2.6E-20 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 SUPERFAMILY SSF58104 225 560 1.83E-60 T 11-10-2018 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 Gene3D G3DSA:1.10.287.950 205 562 2.2E-58 T 11-10-2018 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 514 1.3E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 SMART SM00283 286 561 1.3E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 SMART SM00304 205 257 9.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_000965 aae5b1b8b8d27772b104c7707de1d1ba 564 Pfam PF00672 HAMP domain 205 254 6.7E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_019355 b07fef10609d279460065968c8715d6f 348 Pfam PF13343 Bacterial extracellular solute-binding protein 83 312 2.0E-34 T 11-10-2018 ABE28_019355 b07fef10609d279460065968c8715d6f 348 Gene3D G3DSA:3.40.190.10 47 313 1.7E-94 T 11-10-2018 ABE28_019355 b07fef10609d279460065968c8715d6f 348 Gene3D G3DSA:3.40.190.10 136 342 1.7E-94 T 11-10-2018 ABE28_019355 b07fef10609d279460065968c8715d6f 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 98 111 2.4E-6 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_019355 b07fef10609d279460065968c8715d6f 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 2.4E-6 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_019355 b07fef10609d279460065968c8715d6f 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 82 96 2.4E-6 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_019355 b07fef10609d279460065968c8715d6f 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 2.4E-6 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 ABE28_019355 b07fef10609d279460065968c8715d6f 348 SUPERFAMILY SSF53850 32 344 1.57E-62 T 11-10-2018 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 11-10-2018 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 Gene3D G3DSA:3.40.50.2300 63 307 1.5E-66 T 11-10-2018 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 Gene3D G3DSA:3.40.50.2300 157 286 1.5E-66 T 11-10-2018 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 306 4.4E-26 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.5E-21 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.9E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 SUPERFAMILY SSF53822 59 310 1.54E-65 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 SMART SM00354 2 72 4.6E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 SUPERFAMILY SSF47413 2 60 8.26E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_013580 143115cb96230f3eeb867bdf33d11269 327 Gene3D G3DSA:1.10.260.40 1 59 5.7E-23 T 11-10-2018 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 Pfam PF02357 Transcription termination factor nusG 3 108 1.8E-28 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 Gene3D G3DSA:3.30.70.940 1 118 3.9E-45 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 28.928 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.4E-19 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 SUPERFAMILY SSF82679 2 114 3.14E-41 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 Pfam PF00467 KOW motif 127 158 7.1E-6 T 11-10-2018 IPR005824 KOW ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 SUPERFAMILY SSF50104 121 177 3.16E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 9.1E-67 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 SMART SM00739 123 150 2.4E-4 T 11-10-2018 IPR005824 KOW ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 SMART SM00738 2 113 3.0E-54 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 Gene3D G3DSA:2.30.30.30 119 177 1.4E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABE28_000515 872759d0e52b3429d8bdcd4846d3d9b7 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SUPERFAMILY SSF158472 72 116 7.98E-5 T 11-10-2018 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 Gene3D G3DSA:1.10.287.130 69 180 2.4E-24 T 11-10-2018 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SMART SM00388 119 185 6.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 Gene3D G3DSA:3.30.565.10 191 340 2.5E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 230 338 3.0E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SMART SM00387 229 340 1.4E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SUPERFAMILY SSF47384 104 185 1.86E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 266 280 2.2E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 338 2.2E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 301 319 2.2E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 PRINTS PR00344 Bacterial sensor protein C-terminal signature 284 294 2.2E-20 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 Pfam PF00512 His Kinase A (phospho-acceptor) domain 119 184 5.1E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SUPERFAMILY SSF55874 174 339 4.32E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_000930 6a08563bd856fc31255908e4a66e7b62 340 SMART SM00304 64 118 0.0025 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_019190 54eb9fcb3b250854f420ea58a8539760 407 Pfam PF07690 Major Facilitator Superfamily 20 227 8.4E-21 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_019190 54eb9fcb3b250854f420ea58a8539760 407 SUPERFAMILY SSF103473 8 390 3.01E-55 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019190 54eb9fcb3b250854f420ea58a8539760 407 Gene3D G3DSA:1.20.1250.20 7 391 5.3E-51 T 11-10-2018 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 Pfam PF01070 FMN-dependent dehydrogenase 17 325 1.2E-20 T 11-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 3 330 38.394 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 PIRSF PIRSF003314 1 340 1.1E-121 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 Gene3D G3DSA:3.20.20.70 2 348 1.6E-126 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 SUPERFAMILY SSF51395 23 345 9.94E-85 T 11-10-2018 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 SMART SM01240 23 336 0.0013 T 11-10-2018 ABE28_014350 f16a468878f2c6a6f558b57f04fdcd77 348 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 5 329 1.2E-117 T 11-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 ABE28_022580 e00964cc281deacd958da749c5df6085 592 PIRSF PIRSF005091 1 586 6.5E-121 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like ABE28_022580 e00964cc281deacd958da749c5df6085 592 Pfam PF00884 Sulfatase 235 523 3.4E-29 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABE28_022580 e00964cc281deacd958da749c5df6085 592 Gene3D G3DSA:3.40.720.10 227 530 1.6E-66 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABE28_022580 e00964cc281deacd958da749c5df6085 592 SUPERFAMILY SSF53649 233 539 1.42E-51 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 Gene3D G3DSA:1.10.10.10 2 69 1.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 67 8.2E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 Gene3D G3DSA:3.40.640.10 115 334 1.5E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 SMART SM00345 8 67 8.3E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 Gene3D G3DSA:3.90.1150.10 73 440 1.5E-92 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 SUPERFAMILY SSF53383 65 440 2.23E-77 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 Pfam PF00155 Aminotransferase class I and II 99 429 1.1E-26 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_018670 408eed668fe6ae27144e642f7eb7491c 458 SUPERFAMILY SSF46785 4 69 1.12E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 Gene3D G3DSA:1.25.40.10 388 512 1.3E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 SUPERFAMILY SSF48452 398 510 5.06E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 Pfam PF13181 Tetratricopeptide repeat 466 498 0.008 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 Pfam PF13181 Tetratricopeptide repeat 433 463 2.4E-6 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 Pfam PF01694 Rhomboid family 223 358 2.1E-32 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 SMART SM00028 465 498 3.5E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 SMART SM00028 431 464 0.0039 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 Gene3D G3DSA:1.20.1540.10 175 370 7.0E-48 T 11-10-2018 IPR035952 Rhomboid-like superfamily ABE28_015200 f800ab40e9b4e4e1e666cd2ab305a55a 512 SUPERFAMILY SSF144091 179 360 9.81E-44 T 11-10-2018 ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.5E-25 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 SUPERFAMILY SSF51735 5 247 1.57E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.7E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 246 3.9E-57 T 11-10-2018 ABE28_010420 956e4b965a33b8892260d6bed5c16961 251 Gene3D G3DSA:3.40.50.720 1 249 6.6E-75 T 11-10-2018 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Gene3D G3DSA:3.40.1380.20 340 473 1.5E-48 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 SUPERFAMILY SSF51621 1 342 1.61E-106 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Gene3D G3DSA:3.50.30.10 475 586 4.5E-33 T 11-10-2018 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 SUPERFAMILY SSF50800 70 167 4.01E-25 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 SUPERFAMILY SSF52009 466 583 9.55E-28 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Gene3D G3DSA:2.40.33.10 71 167 1.9E-152 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Pfam PF00224 Pyruvate kinase, barrel domain 1 344 1.8E-159 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 471 3.9E-38 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 SUPERFAMILY SSF52935 323 473 8.5E-46 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Gene3D G3DSA:3.20.20.60 4 332 1.9E-152 T 11-10-2018 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 472 5.3E-194 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.6E-81 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 ABE28_016990 e3f0bfb2f78ca907c364bfb21ad65727 586 Pfam PF00391 PEP-utilising enzyme, mobile domain 505 576 2.7E-19 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABE28_014250 e5a97624673089179bee227096c85906 359 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 356 62.925 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABE28_014250 e5a97624673089179bee227096c85906 359 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 5.4E-116 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABE28_014250 e5a97624673089179bee227096c85906 359 Gene3D G3DSA:3.40.50.1970 1 173 2.3E-63 T 11-10-2018 ABE28_014250 e5a97624673089179bee227096c85906 359 Pfam PF01761 3-dehydroquinate synthase 70 325 5.8E-95 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABE28_014250 e5a97624673089179bee227096c85906 359 Gene3D G3DSA:1.20.1090.10 174 359 4.8E-51 T 11-10-2018 ABE28_014250 e5a97624673089179bee227096c85906 359 SUPERFAMILY SSF56796 4 355 2.09E-98 T 11-10-2018 ABE28_014250 e5a97624673089179bee227096c85906 359 PIRSF PIRSF001455 3 359 3.3E-103 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 ABE28_004435 4135c386e95886f591b1d363319afea7 321 SUPERFAMILY SSF63380 4 104 3.8E-21 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 141 150 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 31 41 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 94 108 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 116 135 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 193 201 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 PRINTS PR00409 Phthalate dioxygenase reductase family signature 80 94 1.1E-25 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 ABE28_004435 4135c386e95886f591b1d363319afea7 321 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 241 312 1.0E-16 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABE28_004435 4135c386e95886f591b1d363319afea7 321 Gene3D G3DSA:3.10.20.30 224 321 1.4E-26 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_004435 4135c386e95886f591b1d363319afea7 321 Pfam PF00175 Oxidoreductase NAD-binding domain 119 207 4.5E-9 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABE28_004435 4135c386e95886f591b1d363319afea7 321 Gene3D G3DSA:2.40.30.10 4 105 1.4E-24 T 11-10-2018 ABE28_004435 4135c386e95886f591b1d363319afea7 321 SUPERFAMILY SSF52343 102 241 2.75E-24 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_004435 4135c386e95886f591b1d363319afea7 321 SUPERFAMILY SSF54292 216 317 4.46E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_004435 4135c386e95886f591b1d363319afea7 321 Gene3D G3DSA:3.40.50.80 106 223 2.6E-23 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_004435 4135c386e95886f591b1d363319afea7 321 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 270 278 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 Pfam PF01593 Flavin containing amine oxidoreductase 11 457 1.6E-46 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 Gene3D G3DSA:3.90.660.20 40 407 9.0E-111 T 11-10-2018 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 SUPERFAMILY SSF54373 301 407 8.24E-18 T 11-10-2018 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 SUPERFAMILY SSF51905 2 458 2.27E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_001050 ba00d1877f5b20b0c598332381555744 461 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 1 458 1.9E-78 T 11-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 Gene3D G3DSA:1.10.3110.10 106 199 9.0E-111 T 11-10-2018 ABE28_001050 ba00d1877f5b20b0c598332381555744 461 Gene3D G3DSA:3.50.50.60 5 449 9.0E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Gene3D G3DSA:1.10.275.10 4 136 2.6E-54 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 458 2.3E-232 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 2.3E-33 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Pfam PF10415 Fumarase C C-terminus 406 459 4.5E-25 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 88.039 T 11-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Gene3D G3DSA:1.10.40.30 406 460 4.3E-27 T 11-10-2018 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Gene3D G3DSA:1.20.200.10 137 404 1.9E-111 T 11-10-2018 ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 Pfam PF00206 Lyase 11 340 1.2E-111 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ABE28_005520 d03e89f31d5f885b8dc65305665e6c04 460 SUPERFAMILY SSF48557 3 458 1.73E-149 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 PIRSF PIRSF037227 1 468 1.8E-185 T 11-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 SUPERFAMILY SSF55031 185 291 5.63E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 Gene3D G3DSA:3.30.70.360 182 298 1.0E-84 T 11-10-2018 ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 398 4.6E-74 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 Pfam PF07687 Peptidase dimerisation domain 186 275 8.8E-8 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 SUPERFAMILY SSF53187 4 432 6.28E-52 T 11-10-2018 ABE28_019325 bb63d043d2411e38b4da68f24be2db6c 476 Gene3D G3DSA:3.40.630.10 20 326 1.0E-84 T 11-10-2018 ABE28_022360 d76e6b8eb3bd5ef890187d72ea282a6d 297 Pfam PF02687 FtsX-like permease family 200 284 1.5E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_022360 d76e6b8eb3bd5ef890187d72ea282a6d 297 PIRSF PIRSF003097 2 297 3.5E-87 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 4 182 1.4E-57 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 SUPERFAMILY SSF48179 187 286 9.35E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 187 285 4.7E-22 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 SUPERFAMILY SSF51735 1 184 7.8E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 Gene3D G3DSA:3.40.50.720 1 187 2.7E-61 T 11-10-2018 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 Gene3D G3DSA:1.10.1040.10 189 312 1.3E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 PIRSF PIRSF000105 1 314 4.0E-88 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABE28_018520 4c2889e1b0ada4a872c836494c4bd6ee 315 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 184 208 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_012395 c7f0eee13fd27c480ea798bd83930eae 186 Gene3D G3DSA:3.40.630.30 3 185 7.5E-44 T 11-10-2018 ABE28_012395 c7f0eee13fd27c480ea798bd83930eae 186 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 1.1E-27 T 11-10-2018 IPR000182 GNAT domain ABE28_012395 c7f0eee13fd27c480ea798bd83930eae 186 SUPERFAMILY SSF55729 1 174 6.23E-44 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Gene3D G3DSA:3.10.350.10 51 106 1.1E-12 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Gene3D G3DSA:3.10.350.10 2 50 2.5E-13 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Gene3D G3DSA:3.20.20.80 131 416 1.0E-104 T 11-10-2018 ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Pfam PF01476 LysM domain 53 96 1.9E-8 T 11-10-2018 IPR018392 LysM domain ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Pfam PF01476 LysM domain 4 47 1.0E-10 T 11-10-2018 IPR018392 LysM domain ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Pfam PF00704 Glycosyl hydrolases family 18 151 408 6.0E-27 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 Gene3D G3DSA:3.10.50.10 323 381 1.0E-104 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SUPERFAMILY SSF51445 125 420 2.34E-46 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SUPERFAMILY SSF54106 2 47 7.59E-11 T 11-10-2018 ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SMART SM00257 52 96 1.0E-9 T 11-10-2018 IPR018392 LysM domain ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SMART SM00257 3 47 1.1E-12 T 11-10-2018 IPR018392 LysM domain ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SMART SM00636 103 410 1.2E-31 T 11-10-2018 IPR011583 Chitinase II GO:0008061 ABE28_021295 11580c8b23d7dda2b249c7abb9f1a00b 428 SUPERFAMILY SSF54106 52 96 7.98E-10 T 11-10-2018 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 SUPERFAMILY SSF51735 3 169 1.72E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 143 159 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 348 2.2E-134 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 Gene3D G3DSA:3.40.50.720 3 334 9.9E-124 T 11-10-2018 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 SMART SM00859 2 140 2.3E-41 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 157 319 5.5E-27 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 342 42.231 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 139 6.4E-30 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 SUPERFAMILY SSF55347 148 316 4.06E-53 T 11-10-2018 ABE28_006020 9c52fe091593ecdc5ba76222579569c7 348 Gene3D G3DSA:3.30.360.10 146 316 9.9E-124 T 11-10-2018 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 Gene3D G3DSA:3.20.20.140 59 357 8.8E-148 T 11-10-2018 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 3 384 5.7E-120 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 SUPERFAMILY SSF51338 4 390 5.88E-17 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 SUPERFAMILY SSF51556 59 357 8.36E-97 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_001115 443ae0073538ae12cc0c070932317f53 392 PIRSF PIRSF038994 1 390 1.4E-133 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 Gene3D G3DSA:2.30.40.10 11 385 8.8E-148 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_001115 443ae0073538ae12cc0c070932317f53 392 Pfam PF01979 Amidohydrolase family 56 385 7.6E-34 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_014695 9cbf83869d62ed9671dd0eed09eb5d56 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 102 3.8E-26 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABE28_014695 9cbf83869d62ed9671dd0eed09eb5d56 107 SUPERFAMILY SSF89360 1 105 3.01E-26 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_014695 9cbf83869d62ed9671dd0eed09eb5d56 107 Gene3D G3DSA:2.60.300.12 1 96 2.1E-7 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PIRSF PIRSF000102 3 307 3.2E-107 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 Gene3D G3DSA:3.40.50.720 1 147 2.6E-59 T 11-10-2018 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 Gene3D G3DSA:3.90.110.10 148 306 1.3E-58 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 11-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 SUPERFAMILY SSF51735 4 146 1.0E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 SUPERFAMILY SSF56327 147 305 2.31E-53 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 8 146 5.3E-48 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 309 45.168 T 11-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 302 3.0E-126 T 11-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 4.8E-50 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 4.8E-50 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 4.8E-50 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 4.8E-50 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 4.8E-50 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_017530 b5381ef8f73325b9d1a9e7bbe03f5822 310 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 304 5.6E-33 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 4.3E-129 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 3.8E-51 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.163 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 Gene3D G3DSA:3.40.50.2020 13 305 2.0E-126 T 11-10-2018 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 2.0E-25 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 SMART SM01400 10 126 1.5E-81 T 11-10-2018 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 Gene3D G3DSA:3.40.50.2020 153 293 2.0E-126 T 11-10-2018 ABE28_000230 0aba314da8298f8a932aac00e5513cb8 317 SUPERFAMILY SSF53271 75 308 6.3E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 Pfam PF13185 GAF domain 12 144 6.7E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 310 3.2E-34 T 11-10-2018 IPR000160 GGDEF domain ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 SUPERFAMILY SSF55781 11 148 3.93E-17 T 11-10-2018 ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 Pfam PF00990 Diguanylate cyclase, GGDEF domain 156 310 4.6E-34 T 11-10-2018 IPR000160 GGDEF domain ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 SMART SM00065 11 158 1.5E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 Gene3D G3DSA:3.30.450.40 1 151 2.1E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 SUPERFAMILY SSF55073 159 309 2.9E-37 T 11-10-2018 IPR029787 Nucleotide cyclase ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 SMART SM00267 143 318 9.8E-28 T 11-10-2018 IPR000160 GGDEF domain ABE28_011270 9463942ef55d44965efc46f6f9607f39 320 Gene3D G3DSA:3.30.70.270 152 316 1.2E-40 T 11-10-2018 ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 SUPERFAMILY SSF88946 35 107 8.63E-12 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 Gene3D G3DSA:1.20.120.1810 3 112 1.1E-8 T 11-10-2018 ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 39 205 2.5E-18 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 SUPERFAMILY SSF88659 137 205 2.28E-8 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 Gene3D G3DSA:1.10.10.10 151 207 8.0E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 Pfam PF08281 Sigma-70, region 4 151 185 5.7E-7 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_008885 9621c36c44fe8b892725a6ae7e04d9bd 207 Pfam PF04542 Sigma-70 region 2 61 105 5.6E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_021965 72d39df85491d85cbf6123990216738d 631 Gene3D G3DSA:1.50.10.20 30 307 5.3E-201 T 11-10-2018 ABE28_021965 72d39df85491d85cbf6123990216738d 631 TIGRFAM TIGR01507 hopene_cyclase: squalene-hopene cyclase 7 627 5.3E-139 T 11-10-2018 IPR006400 Squalene hopene cyclase GO:0016866|GO:0019746 KEGG: 00909+4.2.1.129+5.4.99.17|MetaCyc: PWY-6098|MetaCyc: PWY-7072 ABE28_021965 72d39df85491d85cbf6123990216738d 631 Gene3D G3DSA:1.50.10.20 13 624 5.3E-201 T 11-10-2018 ABE28_021965 72d39df85491d85cbf6123990216738d 631 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 10 295 3.0E-73 T 11-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 ABE28_021965 72d39df85491d85cbf6123990216738d 631 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 11 626 3.0E-130 T 11-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 ABE28_021965 72d39df85491d85cbf6123990216738d 631 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 311 626 8.9E-93 T 11-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 ABE28_021965 72d39df85491d85cbf6123990216738d 631 SUPERFAMILY SSF48239 298 627 3.85E-82 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid ABE28_021965 72d39df85491d85cbf6123990216738d 631 SUPERFAMILY SSF48239 34 301 1.29E-46 T 11-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid ABE28_021965 72d39df85491d85cbf6123990216738d 631 ProSitePatterns PS01074 Terpene synthases signature. 483 497 - T 11-10-2018 IPR002365 Terpene synthase, conserved site GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Gene3D G3DSA:3.90.640.10 198 279 3.0E-150 T 11-10-2018 ABE28_015510 e7464b98776e96f13b8654422718c096 611 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 SUPERFAMILY SSF53067 1 157 9.07E-59 T 11-10-2018 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Pfam PF00012 Hsp70 protein 4 573 3.1E-245 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Gene3D G3DSA:2.60.34.10 348 476 1.5E-57 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Gene3D G3DSA:1.20.1270.10 477 577 2.1E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Gene3D G3DSA:3.30.420.40 5 347 3.0E-150 T 11-10-2018 ABE28_015510 e7464b98776e96f13b8654422718c096 611 SUPERFAMILY SSF100920 354 510 9.55E-62 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 53 61 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 335 355 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 31 43 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 3 16 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 358 377 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 172 182 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 304 320 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 439 455 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 PRINTS PR00301 70kDa heat shock protein signature 112 132 9.7E-79 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 ABE28_015510 e7464b98776e96f13b8654422718c096 611 SUPERFAMILY SSF53067 160 352 7.13E-66 T 11-10-2018 ABE28_015510 e7464b98776e96f13b8654422718c096 611 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 3.7E-283 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 605 36.867 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 ABE28_015510 e7464b98776e96f13b8654422718c096 611 Gene3D G3DSA:3.30.420.40 159 337 3.0E-150 T 11-10-2018 ABE28_015510 e7464b98776e96f13b8654422718c096 611 SUPERFAMILY SSF100934 477 578 3.27E-13 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Gene3D G3DSA:4.10.950.10 197 276 1.6E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.3E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Gene3D G3DSA:2.30.30.30 118 196 1.4E-34 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 SUPERFAMILY SSF50104 126 273 4.45E-61 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.815 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 SMART SM01383 42 118 4.3E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 SMART SM01382 124 253 1.2E-92 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 SUPERFAMILY SSF50249 2 125 2.95E-51 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 2.7E-140 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 6.2E-57 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 Gene3D G3DSA:2.40.50.140 1 113 5.9E-49 T 11-10-2018 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000600 e9ac6236829f0d07c655b0429169224d 276 PIRSF PIRSF002158 3 276 3.4E-98 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_006640 f4b2b98f496d842612666b880c8c16d1 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 34 221 1.9E-21 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_006640 f4b2b98f496d842612666b880c8c16d1 233 Gene3D G3DSA:3.40.50.1110 28 231 1.1E-43 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_006640 f4b2b98f496d842612666b880c8c16d1 233 SUPERFAMILY SSF52266 21 227 8.03E-34 T 11-10-2018 ABE28_005545 f5b50e57d6e8f72e4c561b0ccd0e31f8 273 Gene3D G3DSA:3.40.190.10 35 265 3.0E-79 T 11-10-2018 ABE28_005545 f5b50e57d6e8f72e4c561b0ccd0e31f8 273 SUPERFAMILY SSF53850 34 271 1.13E-67 T 11-10-2018 ABE28_005545 f5b50e57d6e8f72e4c561b0ccd0e31f8 273 Gene3D G3DSA:3.40.190.10 117 221 3.0E-79 T 11-10-2018 ABE28_005545 f5b50e57d6e8f72e4c561b0ccd0e31f8 273 Pfam PF03180 NLPA lipoprotein 35 271 2.8E-71 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_005545 f5b50e57d6e8f72e4c561b0ccd0e31f8 273 PIRSF PIRSF002854 1 271 1.1E-76 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_002885 1c1831a4419e3e48bc70ba2b2ec1837c 457 Pfam PF00324 Amino acid permease 14 424 7.9E-104 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_002885 1c1831a4419e3e48bc70ba2b2ec1837c 457 PIRSF PIRSF006060 1 456 7.2E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_002885 1c1831a4419e3e48bc70ba2b2ec1837c 457 Gene3D G3DSA:1.20.1740.10 5 455 1.9E-57 T 11-10-2018 ABE28_002885 1c1831a4419e3e48bc70ba2b2ec1837c 457 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_019215 64e0facab32111e6fc21411d6f61b07c 377 Pfam PF07366 SnoaL-like polyketide cyclase 241 369 3.1E-16 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABE28_019215 64e0facab32111e6fc21411d6f61b07c 377 SUPERFAMILY SSF54427 60 201 4.2E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019215 64e0facab32111e6fc21411d6f61b07c 377 Gene3D G3DSA:3.10.450.50 64 211 1.8E-19 T 11-10-2018 ABE28_019215 64e0facab32111e6fc21411d6f61b07c 377 Gene3D G3DSA:3.10.450.50 237 372 3.1E-23 T 11-10-2018 ABE28_019215 64e0facab32111e6fc21411d6f61b07c 377 SUPERFAMILY SSF54427 239 370 1.83E-23 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_012180 48cba458e7c60053c9d899d82cac97e8 263 SUPERFAMILY SSF56112 8 169 5.41E-25 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_012180 48cba458e7c60053c9d899d82cac97e8 263 Pfam PF01636 Phosphotransferase enzyme family 111 176 1.8E-12 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_012180 48cba458e7c60053c9d899d82cac97e8 263 Gene3D G3DSA:3.90.1200.10 82 188 7.8E-10 T 11-10-2018 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 SUPERFAMILY SSF55620 28 136 7.34E-28 T 11-10-2018 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 PIRSF PIRSF027377 7 147 9.1E-62 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 Pfam PF14489 QueF-like protein 62 140 5.4E-35 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 138 1.9E-54 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 71.804 T 11-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 ABE28_002340 ba7103dc24008579d2ef09c8d7e3bd66 165 Gene3D G3DSA:3.30.1130.10 21 165 9.0E-68 T 11-10-2018 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Pfam PF01571 Aminomethyltransferase folate-binding domain 9 261 9.2E-96 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Gene3D G3DSA:3.30.1360.120 6 238 9.2E-93 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Gene3D G3DSA:3.30.70.1400 53 138 9.2E-93 T 11-10-2018 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 269 359 3.8E-25 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Hamap MF_00259 Aminomethyltransferase [gcvT]. 3 365 48.784 T 11-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Gene3D G3DSA:2.40.30.110 283 365 2.9E-29 T 11-10-2018 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 4 364 3.3E-139 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 SUPERFAMILY SSF101790 276 365 7.52E-25 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 Gene3D G3DSA:4.10.1250.10 239 282 5.6E-18 T 11-10-2018 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 PIRSF PIRSF006487 1 368 1.6E-101 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 ABE28_015080 e585053590ab7cba9655d170a4f1775f 368 SUPERFAMILY SSF103025 3 284 1.11E-100 T 11-10-2018 ABE28_001100 e5d11f9a7ce8638c36cb39cadcd941e8 241 Pfam PF13580 SIS domain 5 139 5.1E-42 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_001100 e5d11f9a7ce8638c36cb39cadcd941e8 241 Gene3D G3DSA:3.40.50.10490 1 237 7.3E-83 T 11-10-2018 ABE28_001100 e5d11f9a7ce8638c36cb39cadcd941e8 241 SUPERFAMILY SSF53697 1 202 3.84E-22 T 11-10-2018 ABE28_001100 e5d11f9a7ce8638c36cb39cadcd941e8 241 Hamap MF_01240 UPF0309 protein . 1 241 38.76 T 11-10-2018 IPR022951 Uncharacterised protein family UPF0309 ABE28_016625 45acfe10fdbfc96a56d3042c34776d6b 170 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 148 9.9E-35 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 ABE28_016625 45acfe10fdbfc96a56d3042c34776d6b 170 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 144 1.1E-31 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ABE28_016625 45acfe10fdbfc96a56d3042c34776d6b 170 Gene3D G3DSA:3.60.21.10 1 169 8.5E-48 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_016625 45acfe10fdbfc96a56d3042c34776d6b 170 SUPERFAMILY SSF56300 1 166 3.1E-44 T 11-10-2018 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 Gene3D G3DSA:3.30.2130.10 255 408 7.8E-34 T 11-10-2018 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 SUPERFAMILY SSF53633 2 246 2.62E-64 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 64 401 2.9E-90 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 SUPERFAMILY SSF55021 260 346 6.3E-14 T 11-10-2018 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 Gene3D G3DSA:3.40.1160.10 1 254 2.6E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 SUPERFAMILY SSF55021 335 404 1.14E-15 T 11-10-2018 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 PIRSF PIRSF000726 58 408 1.0E-87 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 PIRSF PIRSF000726 1 65 3.0E-9 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 Pfam PF00696 Amino acid kinase family 2 235 1.3E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 5.5E-134 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008230 1440e5d9ba0ab3dc238d698ea89e1036 408 Pfam PF13840 ACT domain 335 397 5.9E-20 T 11-10-2018 IPR027795 CASTOR, ACT domain ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 3.7E-129 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 SUPERFAMILY SSF81799 113 214 1.1E-36 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 Pfam PF01795 MraW methylase family 2 309 8.2E-135 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 SUPERFAMILY SSF53335 4 309 1.1E-44 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 Gene3D G3DSA:3.40.50.150 4 308 7.4E-105 T 11-10-2018 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 PIRSF PIRSF004486 1 311 2.9E-110 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.184 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 ABE28_007480 3f2d403ece4d4299d9418d69dfe10fa0 312 Gene3D G3DSA:1.10.150.170 111 215 7.4E-105 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Pfam PF00672 HAMP domain 194 241 9.6E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 419 5.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 477 5.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 440 458 5.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 PRINTS PR00344 Bacterial sensor protein C-terminal signature 423 433 5.2E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SMART SM00387 367 480 2.9E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SUPERFAMILY SSF47384 242 321 1.96E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SMART SM00388 254 321 2.4E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SMART SM00304 194 246 3.0E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SUPERFAMILY SSF158472 194 244 3.4E-10 T 11-10-2018 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 368 478 1.3E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Gene3D G3DSA:1.10.287.130 250 320 1.6E-18 T 11-10-2018 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Gene3D G3DSA:3.30.565.10 326 482 1.2E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 SUPERFAMILY SSF55874 310 477 1.27E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Pfam PF00512 His Kinase A (phospho-acceptor) domain 255 319 9.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_013805 e2e5d07a201aef72ea8d368ebafe9c65 482 Gene3D G3DSA:1.20.1480.50 158 249 3.1E-14 T 11-10-2018 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Pfam PF02817 e3 binding domain 126 161 1.1E-11 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 SUPERFAMILY SSF47005 121 164 1.96E-8 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 194 421 2.4E-77 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 SUPERFAMILY SSF51230 2 94 1.07E-26 T 11-10-2018 IPR011053 Single hybrid motif ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Gene3D G3DSA:2.40.50.100 1 101 1.4E-26 T 11-10-2018 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 422 8.5E-172 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Gene3D G3DSA:4.10.320.10 126 165 1.3E-13 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 SUPERFAMILY SSF52777 193 421 1.11E-84 T 11-10-2018 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Pfam PF00364 Biotin-requiring enzyme 3 74 1.3E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 Gene3D G3DSA:3.30.559.10 193 422 1.0E-88 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_012970 36a03a26761ac96a91ec52bb5adf9c48 423 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABE28_023475 e4ddab324de2ba9b3ee9ba60e37b35a2 512 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 1.1E-90 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_023475 e4ddab324de2ba9b3ee9ba60e37b35a2 512 Gene3D G3DSA:1.20.1730.10 6 496 1.0E-68 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_023475 e4ddab324de2ba9b3ee9ba60e37b35a2 512 Pfam PF00474 Sodium:solute symporter family 33 434 1.2E-126 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_023475 e4ddab324de2ba9b3ee9ba60e37b35a2 512 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 148 173 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site ABE28_023475 e4ddab324de2ba9b3ee9ba60e37b35a2 512 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site ABE28_022210 b0106e7cdfb0f5d564f3ec91ba4c4658 485 Gene3D G3DSA:3.40.309.10 256 436 2.4E-154 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_022210 b0106e7cdfb0f5d564f3ec91ba4c4658 485 Gene3D G3DSA:3.40.605.10 13 255 2.4E-154 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_022210 b0106e7cdfb0f5d564f3ec91ba4c4658 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_022210 b0106e7cdfb0f5d564f3ec91ba4c4658 485 Pfam PF00171 Aldehyde dehydrogenase family 17 474 3.7E-155 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_022210 b0106e7cdfb0f5d564f3ec91ba4c4658 485 SUPERFAMILY SSF53720 6 477 7.98E-146 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 6.2E-57 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 SUPERFAMILY SSF52374 1 188 1.6E-53 T 11-10-2018 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 31.501 T 11-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 66 3.0E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 Pfam PF01467 Cytidylyltransferase-like 6 161 9.3E-35 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_015600 535e2deb6589e455d520a9e428425c0d 189 Gene3D G3DSA:3.40.50.620 1 188 1.3E-64 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 SUPERFAMILY SSF53850 90 293 1.21E-31 T 11-10-2018 ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 Gene3D G3DSA:3.40.190.290 92 292 9.7E-42 T 11-10-2018 ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.0E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 Gene3D G3DSA:1.10.10.10 1 91 7.7E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 SUPERFAMILY SSF46785 1 85 7.63E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 Pfam PF03466 LysR substrate binding domain 88 285 9.3E-37 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_010595 f6a5da18f6e3c49cdeb9c7b003b5ddc3 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 9.4E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_002275 b40b622e1a2a43326e8f7b6eddd564de 915 SUPERFAMILY SSF52540 375 597 4.63E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002275 b40b622e1a2a43326e8f7b6eddd564de 915 SUPERFAMILY SSF48452 42 165 6.58E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_002275 b40b622e1a2a43326e8f7b6eddd564de 915 Gene3D G3DSA:1.25.40.10 10 202 2.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_002275 b40b622e1a2a43326e8f7b6eddd564de 915 Pfam PF00009 Elongation factor Tu GTP binding domain 378 542 1.8E-7 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_001740 d389deb82d1968010bcde78ce734f240 96 SUPERFAMILY SSF140453 2 95 2.22E-22 T 11-10-2018 IPR036689 ESAT-6-like superfamily ABE28_001740 d389deb82d1968010bcde78ce734f240 96 Gene3D G3DSA:1.10.287.1060 1 96 1.2E-26 T 11-10-2018 ABE28_001740 d389deb82d1968010bcde78ce734f240 96 Pfam PF06013 Proteins of 100 residues with WXG 3 88 2.1E-22 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like ABE28_001740 d389deb82d1968010bcde78ce734f240 96 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 3 92 4.9E-24 T 11-10-2018 IPR010310 Type VII secretion system ESAT-6-like ABE28_004470 4957b669433953ba7abf5a382fb6ac8c 354 SUPERFAMILY SSF52096 5 338 1.83E-56 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_004470 4957b669433953ba7abf5a382fb6ac8c 354 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 345 1.6E-116 T 11-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 ABE28_004470 4957b669433953ba7abf5a382fb6ac8c 354 Gene3D G3DSA:3.90.226.10 4 352 6.3E-113 T 11-10-2018 ABE28_001835 d97f4a3ba2f313eb63d80ed2c9a348eb 401 SUPERFAMILY SSF103473 7 394 2.22E-51 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001835 d97f4a3ba2f313eb63d80ed2c9a348eb 401 Gene3D G3DSA:1.20.1250.20 5 188 2.8E-22 T 11-10-2018 ABE28_001835 d97f4a3ba2f313eb63d80ed2c9a348eb 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_001835 d97f4a3ba2f313eb63d80ed2c9a348eb 401 Gene3D G3DSA:1.20.1250.20 204 396 1.7E-22 T 11-10-2018 ABE28_001835 d97f4a3ba2f313eb63d80ed2c9a348eb 401 Pfam PF07690 Major Facilitator Superfamily 12 347 1.8E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 SUPERFAMILY SSF88659 167 250 1.1E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 SUPERFAMILY SSF88946 4 100 9.73E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 Gene3D G3DSA:1.10.1740.10 18 97 9.0E-26 T 11-10-2018 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 Gene3D G3DSA:1.20.140.160 99 251 3.2E-43 T 11-10-2018 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 Pfam PF04545 Sigma-70, region 4 198 246 3.9E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PRINTS PR00046 Major sigma-70 factor signature 79 87 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PRINTS PR00046 Major sigma-70 factor signature 233 244 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PRINTS PR00046 Major sigma-70 factor signature 201 213 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PRINTS PR00046 Major sigma-70 factor signature 218 233 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PRINTS PR00046 Major sigma-70 factor signature 55 68 1.6E-11 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 28 249 2.5E-80 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 Pfam PF04539 Sigma-70 region 3 108 184 3.8E-10 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 218 244 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 PIRSF PIRSF000770 21 251 1.0E-38 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 Pfam PF04542 Sigma-70 region 2 28 100 1.5E-11 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 SUPERFAMILY SSF88659 101 168 7.85E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_008085 f6d38eaaa8be3a70b8115d881559b8cc 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 163 248 2.8E-17 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 Gene3D G3DSA:3.40.50.1980 25 224 1.3E-126 T 11-10-2018 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 27 419 1.0E-168 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 420 42.467 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 Pfam PF00815 Histidinol dehydrogenase 20 419 1.2E-172 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 SUPERFAMILY SSF53720 22 419 3.33E-87 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 193 218 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 163 189 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 222 243 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 244 263 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 354 372 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 128 154 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 27 51 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PRINTS PR00083 Histidinol dehydrogenase signature 313 338 4.7E-89 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 Gene3D G3DSA:3.40.50.1980 226 342 1.3E-126 T 11-10-2018 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 222 254 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_022240 d340ee221979c584f5d5c26cd75d15a5 426 PIRSF PIRSF000099 2 423 4.9E-170 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_002395 d61427d59c0a36316438c387de17248a 400 SUPERFAMILY SSF103473 8 395 5.36E-73 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_002395 d61427d59c0a36316438c387de17248a 400 Gene3D G3DSA:1.20.1250.20 3 393 1.3E-72 T 11-10-2018 ABE28_002395 d61427d59c0a36316438c387de17248a 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_002395 d61427d59c0a36316438c387de17248a 400 Pfam PF07690 Major Facilitator Superfamily 16 347 8.9E-53 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_002395 d61427d59c0a36316438c387de17248a 400 PRINTS PR01035 Tetracycline resistance protein signature 21 37 1.1E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_002395 d61427d59c0a36316438c387de17248a 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.1E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_002395 d61427d59c0a36316438c387de17248a 400 PRINTS PR01035 Tetracycline resistance protein signature 164 184 1.1E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_002395 d61427d59c0a36316438c387de17248a 400 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.1E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_002395 d61427d59c0a36316438c387de17248a 400 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 48 186 4.9E-39 T 11-10-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 SUPERFAMILY SSF56784 15 150 3.62E-26 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 Pfam PF13242 HAD-hyrolase-like 90 136 7.6E-11 T 11-10-2018 ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 Gene3D G3DSA:3.40.50.1000 16 156 3.3E-22 T 11-10-2018 IPR023214 HAD superfamily ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 28 138 3.4E-22 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 3 164 2.6E-55 T 11-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like ABE28_015620 1af419b7d1bf34109920d13a0c9032d6 173 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 129 6.7E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_010300 0ff648a12706339024da0b2a61fa8798 290 SMART SM00047 123 282 2.3E-28 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_010300 0ff648a12706339024da0b2a61fa8798 290 Gene3D G3DSA:1.10.530.10 134 279 1.3E-39 T 11-10-2018 ABE28_010300 0ff648a12706339024da0b2a61fa8798 290 Gene3D G3DSA:4.10.80.30 186 208 1.3E-39 T 11-10-2018 ABE28_010300 0ff648a12706339024da0b2a61fa8798 290 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 278 3.2E-22 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 Pfam PF01368 DHH family 3 146 1.3E-30 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 45.537 T 11-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 Gene3D G3DSA:3.10.310.20 190 309 3.3E-36 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 SMART SM01131 181 307 8.1E-50 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 SUPERFAMILY SSF64182 2 306 2.62E-81 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 Gene3D G3DSA:3.90.1640.10 1 188 3.3E-80 T 11-10-2018 ABE28_005225 efad627fc0f1b1ab81138947acbdf2b0 309 Pfam PF02833 DHHA2 domain 183 305 7.4E-20 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_001435 cf5552ee2fa68d021ec7b6d9b1339894 181 SMART SM00331 3 178 6.1E-10 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001435 cf5552ee2fa68d021ec7b6d9b1339894 181 SUPERFAMILY SSF81606 5 138 2.62E-10 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001435 cf5552ee2fa68d021ec7b6d9b1339894 181 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 17 138 3.4E-6 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001435 cf5552ee2fa68d021ec7b6d9b1339894 181 Gene3D G3DSA:3.60.40.10 1 178 3.0E-28 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 SUPERFAMILY SSF55347 125 263 7.52E-61 T 11-10-2018 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 SUPERFAMILY SSF51735 2 149 5.2E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Pfam PF13288 DXP reductoisomerase C-terminal domain 260 377 5.6E-41 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 2.2E-168 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 145 228 4.8E-41 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 382 47.183 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 131 1.1E-41 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 PIRSF PIRSF006205 1 386 1.8E-160 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Gene3D G3DSA:1.10.1740.10 303 386 6.9E-28 T 11-10-2018 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 Gene3D G3DSA:3.40.50.720 1 149 3.1E-50 T 11-10-2018 ABE28_008125 c4ed830f9c6efd3a2d1ea6fdc4dec889 386 SUPERFAMILY SSF69055 292 384 1.7E-31 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 ABE28_007455 a468c1ce32c3e3d91ecfeb0ceacfd241 162 SUPERFAMILY SSF55729 33 142 6.65E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_007455 a468c1ce32c3e3d91ecfeb0ceacfd241 162 Pfam PF13508 Acetyltransferase (GNAT) domain 83 130 6.0E-8 T 11-10-2018 IPR000182 GNAT domain ABE28_007455 a468c1ce32c3e3d91ecfeb0ceacfd241 162 Gene3D G3DSA:3.40.630.30 2 160 4.7E-57 T 11-10-2018 ABE28_007455 a468c1ce32c3e3d91ecfeb0ceacfd241 162 Hamap MF_00824 Uncharacterized N-acetyltransferase . 2 149 41.523 T 11-10-2018 IPR017274 Putative N-acetyltransferase YlbP ABE28_007455 a468c1ce32c3e3d91ecfeb0ceacfd241 162 PIRSF PIRSF037732 1 162 2.5E-81 T 11-10-2018 IPR017274 Putative N-acetyltransferase YlbP ABE28_023150 6ddfa2807411d941f97417fe4758a873 77 Pfam PF02597 ThiS family 4 77 5.2E-17 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABE28_023150 6ddfa2807411d941f97417fe4758a873 77 SUPERFAMILY SSF54285 1 77 5.96E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_023150 6ddfa2807411d941f97417fe4758a873 77 Gene3D G3DSA:3.10.20.30 1 77 2.1E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_023150 6ddfa2807411d941f97417fe4758a873 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 6.2E-21 T 11-10-2018 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 Pfam PF00072 Response regulator receiver domain 22 122 1.8E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 SUPERFAMILY SSF46894 159 223 1.9E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 SMART SM00421 163 220 1.8E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 SMART SM00448 11 122 3.3E-5 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 219 6.1E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 2.0E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 Gene3D G3DSA:3.40.50.12740 11 225 1.6E-41 T 11-10-2018 ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 SUPERFAMILY SSF52172 22 138 3.13E-16 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_005825 6e6fcde7a7c220c64c2edf7325e6d5d0 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 15 334 9.0E-85 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 Pfam PF06144 DNA polymerase III, delta subunit 18 190 4.2E-47 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 SUPERFAMILY SSF48019 215 334 6.12E-25 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 Gene3D G3DSA:3.40.50.300 1 143 5.7E-42 T 11-10-2018 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 Gene3D G3DSA:1.20.272.10 214 335 2.6E-40 T 11-10-2018 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 Gene3D G3DSA:1.10.8.60 148 213 4.1E-10 T 11-10-2018 ABE28_015555 c4fedead9a44db283d71fd65ba04900d 335 SUPERFAMILY SSF52540 7 211 8.63E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 8.8E-169 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 405 4.2E-92 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 41.866 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 Gene3D G3DSA:3.65.10.10 21 229 1.9E-157 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 SUPERFAMILY SSF55205 1 415 4.06E-132 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABE28_022960 57a2c437eca83678c9503e3d975b8627 427 Gene3D G3DSA:3.65.10.10 6 412 1.9E-157 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_001985 87d07b54076d41ac3c833fbed1bd54a9 96 Gene3D G3DSA:1.10.20.60 1 94 4.3E-31 T 11-10-2018 ABE28_001985 87d07b54076d41ac3c833fbed1bd54a9 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.5E-21 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABE28_001985 87d07b54076d41ac3c833fbed1bd54a9 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 2.7E-33 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABE28_001985 87d07b54076d41ac3c833fbed1bd54a9 96 SUPERFAMILY SSF141000 4 94 8.5E-32 T 11-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 ABE28_001985 87d07b54076d41ac3c833fbed1bd54a9 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.029 T 11-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.549 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 493 5.1E-228 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 SUPERFAMILY SSF53067 4 254 4.58E-96 T 11-10-2018 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 6.5E-66 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 Gene3D G3DSA:3.30.420.40 1 252 3.3E-112 T 11-10-2018 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 2.8E-88 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 PIRSF PIRSF000538 2 495 5.3E-180 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 SUPERFAMILY SSF53067 254 493 9.58E-87 T 11-10-2018 ABE28_021020 ab723f7ee0facfb937a4fc13b0de0015 496 Gene3D G3DSA:3.30.420.40 253 496 2.9E-92 T 11-10-2018 ABE28_014825 d89f416960e4d7b0d032e637e1fc1da7 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 4.0E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_014825 d89f416960e4d7b0d032e637e1fc1da7 219 Gene3D G3DSA:1.10.3720.10 1 219 8.0E-58 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_014825 d89f416960e4d7b0d032e637e1fc1da7 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 110 3.6E-30 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_014825 d89f416960e4d7b0d032e637e1fc1da7 219 SUPERFAMILY SSF161098 13 217 1.44E-44 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 Pfam PF00186 Dihydrofolate reductase 1 160 1.8E-65 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 PRINTS PR00070 Dihydrofolate reductase signature 92 106 2.6E-17 T 11-10-2018 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 PRINTS PR00070 Dihydrofolate reductase signature 40 51 2.6E-17 T 11-10-2018 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 PRINTS PR00070 Dihydrofolate reductase signature 27 35 2.6E-17 T 11-10-2018 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 PRINTS PR00070 Dihydrofolate reductase signature 13 23 2.6E-17 T 11-10-2018 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 Gene3D G3DSA:3.40.430.10 1 161 1.8E-61 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 PIRSF PIRSF000194 1 161 2.4E-64 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 ABE28_013365 be53faa92ab82138839f1b2b0ac49a97 161 SUPERFAMILY SSF53597 1 160 9.82E-59 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_011170 bb94215e3b207ebb1c89b02f0ef5a844 336 SUPERFAMILY SSF81345 15 328 5.62E-65 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_011170 bb94215e3b207ebb1c89b02f0ef5a844 336 Pfam PF01032 FecCD transport family 29 328 8.5E-63 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_011170 bb94215e3b207ebb1c89b02f0ef5a844 336 Gene3D G3DSA:1.10.3470.10 15 331 3.7E-60 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_002730 20eda231062d4f5889212f2e4417a0ae 388 Gene3D G3DSA:1.20.1250.20 4 189 9.7E-24 T 11-10-2018 ABE28_002730 20eda231062d4f5889212f2e4417a0ae 388 Pfam PF07690 Major Facilitator Superfamily 210 382 4.3E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_002730 20eda231062d4f5889212f2e4417a0ae 388 Gene3D G3DSA:1.20.1250.20 221 388 9.8E-22 T 11-10-2018 ABE28_002730 20eda231062d4f5889212f2e4417a0ae 388 SUPERFAMILY SSF103473 4 383 7.98E-51 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 Gene3D G3DSA:3.40.50.300 12 179 7.6E-51 T 11-10-2018 ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 4.1E-117 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 SUPERFAMILY SSF52540 9 265 1.21E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 PIRSF PIRSF006230 1 283 9.5E-105 T 11-10-2018 IPR016478 GTPase, MTG1 ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 123 143 9.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 169 184 9.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 Pfam PF01926 50S ribosome-binding GTPase 123 205 7.4E-18 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_007865 4b9f7c311bca5abffcf2ab357fdf169f 290 Gene3D G3DSA:1.10.1580.10 180 272 6.4E-28 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily ABE28_000160 fc293ff856d7f6a6f8c8aa08686d617d 94 SMART SM00966 8 51 6.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000160 fc293ff856d7f6a6f8c8aa08686d617d 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.8E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000160 fc293ff856d7f6a6f8c8aa08686d617d 94 Gene3D G3DSA:2.10.260.10 1 51 2.3E-26 T 11-10-2018 ABE28_000160 fc293ff856d7f6a6f8c8aa08686d617d 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 8.2E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000160 fc293ff856d7f6a6f8c8aa08686d617d 94 SUPERFAMILY SSF89447 1 52 1.29E-16 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 Gene3D G3DSA:3.40.50.450 3 278 1.5E-119 T 11-10-2018 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 Gene3D G3DSA:3.40.50.460 142 251 1.5E-119 T 11-10-2018 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 SUPERFAMILY SSF53784 1 312 1.44E-118 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PIRSF PIRSF000532 1 318 1.4E-122 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 Pfam PF00365 Phosphofructokinase 3 275 4.8E-114 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 2.2E-137 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 48.422 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_016995 6009aaa78879c453c20bc50e667bf95d 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.7E-88 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 SUPERFAMILY SSF63520 58 170 1.57E-26 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 ProSitePatterns PS00654 PRD domain signature. 101 113 - T 11-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Gene3D G3DSA:2.30.24.10 1 69 3.6E-22 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Gene3D G3DSA:1.10.1790.10 70 168 1.2E-26 T 11-10-2018 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Pfam PF00874 PRD domain 80 166 1.5E-21 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Pfam PF00874 PRD domain 185 274 1.2E-19 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 SMART SM01061 4 62 3.0E-22 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Gene3D G3DSA:1.20.58.1950 225 277 4.0E-25 T 11-10-2018 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 SUPERFAMILY SSF63520 178 276 2.75E-24 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Gene3D G3DSA:1.20.890.100 169 223 1.4E-21 T 11-10-2018 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 SUPERFAMILY SSF50151 4 55 6.67E-14 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 ABE28_001810 7cceec0c0c40c23ba5a5b6b5548487fa 280 Pfam PF03123 CAT RNA binding domain 5 60 6.1E-20 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 SUPERFAMILY SSF49472 1 116 6.67E-38 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 Pfam PF00576 HIUase/Transthyretin family 4 115 1.3E-31 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 3 116 1.7E-36 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 Gene3D G3DSA:2.60.40.180 1 116 5.2E-36 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 PRINTS PR00189 Transthyretin signature 94 116 1.3E-13 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 PRINTS PR00189 Transthyretin signature 36 61 1.3E-13 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 PRINTS PR00189 Transthyretin signature 3 23 1.3E-13 T 11-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 SMART SM00095 1 115 0.0015 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_004320 3f994e3ac030934f9aaff8fa626a0854 116 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 11-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_016010 71dc0fb322fb0362da0ba854ab832d07 342 Gene3D G3DSA:3.40.50.720 4 308 1.8E-137 T 11-10-2018 ABE28_016010 71dc0fb322fb0362da0ba854ab832d07 342 SUPERFAMILY SSF51735 1 259 2.65E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016010 71dc0fb322fb0362da0ba854ab832d07 342 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.4E-104 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_016010 71dc0fb322fb0362da0ba854ab832d07 342 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 284 331 8.4E-23 T 11-10-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 ABE28_016010 71dc0fb322fb0362da0ba854ab832d07 342 Gene3D G3DSA:3.90.25.30 166 322 1.8E-137 T 11-10-2018 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.865 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-30 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABE28_000520 718866b47724a2b4d572e6990b856c93 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-31 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal ABE28_000520 718866b47724a2b4d572e6990b856c93 141 Gene3D G3DSA:3.30.1550.10 2 71 3.3E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABE28_000520 718866b47724a2b4d572e6990b856c93 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 4.0E-16 T 11-10-2018 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 SUPERFAMILY SSF46906 67 140 1.06E-27 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily ABE28_000520 718866b47724a2b4d572e6990b856c93 141 SUPERFAMILY SSF54747 3 72 1.83E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily ABE28_000520 718866b47724a2b4d572e6990b856c93 141 SMART SM00649 9 140 2.6E-88 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 6.1E-26 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 ABE28_000520 718866b47724a2b4d572e6990b856c93 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 2.2E-65 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 2.1E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 2.1E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 SUPERFAMILY SSF48008 88 226 2.33E-18 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 Pfam PF07729 FCD domain 90 208 9.5E-17 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 SMART SM00895 90 219 1.9E-7 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 Gene3D G3DSA:1.10.10.10 16 81 9.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 21 80 1.0E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 SUPERFAMILY SSF46785 13 84 2.79E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 SMART SM00345 23 81 4.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_001655 d2d6baf76a634445ef8e6fce3fde20ac 243 Gene3D G3DSA:1.20.120.530 84 221 5.5E-16 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_006000 6588750e033a0762411b397c84429cc6 262 Pfam PF00326 Prolyl oligopeptidase family 88 255 1.6E-15 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ABE28_006000 6588750e033a0762411b397c84429cc6 262 Gene3D G3DSA:3.40.50.1820 1 256 8.0E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006000 6588750e033a0762411b397c84429cc6 262 SUPERFAMILY SSF53474 26 255 1.04E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 Hamap MF_01375 Phosphonoacetaldehyde hydrolase [phnX]. 1 271 108.977 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 Pfam PF13419 Haloacid dehalogenase-like hydrolase 71 203 4.8E-10 T 11-10-2018 ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 Gene3D G3DSA:1.10.150.240 22 99 6.7E-103 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 TIGRFAM TIGR01422 phosphonatase: phosphonoacetaldehyde hydrolase 4 256 4.0E-101 T 11-10-2018 IPR006323 Phosphonoacetaldehyde hydrolase GO:0019700|GO:0050194 KEGG: 00440+3.11.1.1 ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 SUPERFAMILY SSF56784 4 258 7.94E-52 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_017625 d8f8b585230c26d48161a7eec1658306 271 Gene3D G3DSA:3.40.50.1000 7 268 6.7E-103 T 11-10-2018 IPR023214 HAD superfamily ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 2.1E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 Gene3D G3DSA:3.90.230.10 1 248 3.3E-108 T 11-10-2018 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 8.0E-20 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 Pfam PF00557 Metallopeptidase family M24 12 239 1.1E-53 T 11-10-2018 IPR000994 Peptidase M24 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 39.777 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_011460 3e4e3deaa870647461468da07c5c6d84 248 SUPERFAMILY SSF55920 1 246 9.81E-87 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_018750 817673cc8dce1768e9056aed47267acb 170 Gene3D G3DSA:1.10.260.40 3 69 7.5E-21 T 11-10-2018 ABE28_018750 817673cc8dce1768e9056aed47267acb 170 Pfam PF07883 Cupin domain 99 167 3.4E-15 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_018750 817673cc8dce1768e9056aed47267acb 170 Pfam PF01381 Helix-turn-helix 10 63 2.9E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_018750 817673cc8dce1768e9056aed47267acb 170 SMART SM00530 9 64 2.5E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_018750 817673cc8dce1768e9056aed47267acb 170 Gene3D G3DSA:2.60.120.10 70 168 6.4E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_018750 817673cc8dce1768e9056aed47267acb 170 SUPERFAMILY SSF51182 49 167 1.69E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_018750 817673cc8dce1768e9056aed47267acb 170 SUPERFAMILY SSF47413 4 68 4.17E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_018710 817673cc8dce1768e9056aed47267acb 170 Gene3D G3DSA:1.10.260.40 3 69 7.5E-21 T 11-10-2018 ABE28_018710 817673cc8dce1768e9056aed47267acb 170 Pfam PF07883 Cupin domain 99 167 3.4E-15 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_018710 817673cc8dce1768e9056aed47267acb 170 Pfam PF01381 Helix-turn-helix 10 63 2.9E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_018710 817673cc8dce1768e9056aed47267acb 170 SMART SM00530 9 64 2.5E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_018710 817673cc8dce1768e9056aed47267acb 170 Gene3D G3DSA:2.60.120.10 70 168 6.4E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_018710 817673cc8dce1768e9056aed47267acb 170 SUPERFAMILY SSF51182 49 167 1.69E-21 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_018710 817673cc8dce1768e9056aed47267acb 170 SUPERFAMILY SSF47413 4 68 4.17E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 SMART SM00354 2 59 1.1E-14 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 SUPERFAMILY SSF47413 2 46 2.25E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 SUPERFAMILY SSF53822 61 322 2.36E-66 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 37 2.6E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 Gene3D G3DSA:3.40.50.2300 63 313 2.8E-67 T 11-10-2018 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 Pfam PF13377 Periplasmic binding protein-like domain 161 321 3.9E-30 T 11-10-2018 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 Gene3D G3DSA:3.40.50.2300 152 317 2.8E-67 T 11-10-2018 ABE28_006430 7451a075be579519fcf3d74b18940b3e 324 Gene3D G3DSA:1.10.260.40 1 46 2.3E-17 T 11-10-2018 ABE28_012640 914cfd9eb17a374822639844fe6452ca 147 Gene3D G3DSA:3.30.530.20 5 144 5.7E-17 T 11-10-2018 IPR023393 START-like domain superfamily ABE28_012640 914cfd9eb17a374822639844fe6452ca 147 Pfam PF06240 Carbon monoxide dehydrogenase subunit G (CoxG) 11 143 7.6E-6 T 11-10-2018 IPR010419 Carbon monoxide dehydrogenase subunit G ABE28_012640 914cfd9eb17a374822639844fe6452ca 147 SUPERFAMILY SSF55961 6 142 7.53E-20 T 11-10-2018 ABE28_008855 be45fccd01d5c068780af72b331728bb 156 SUPERFAMILY SSF159006 2 150 1.1E-21 T 11-10-2018 ABE28_008855 be45fccd01d5c068780af72b331728bb 156 Gene3D G3DSA:2.30.30.290 70 156 3.8E-11 T 11-10-2018 IPR023385 YopX-like, C-terminal ABE28_008855 be45fccd01d5c068780af72b331728bb 156 Pfam PF09643 YopX protein 5 150 1.1E-18 T 11-10-2018 IPR019096 YopX protein ABE28_005190 ef187c74b2d1541cec167c84e404f884 131 SUPERFAMILY SSF52833 1 126 5.02E-33 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_005190 ef187c74b2d1541cec167c84e404f884 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 2.8E-31 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABE28_005190 ef187c74b2d1541cec167c84e404f884 131 Gene3D G3DSA:3.40.30.10 1 120 4.5E-40 T 11-10-2018 ABE28_005190 ef187c74b2d1541cec167c84e404f884 131 Pfam PF03960 ArsC family 5 113 2.6E-19 T 11-10-2018 IPR006660 Arsenate reductase-like ABE28_023990 51c8b265fab5dd896bd9b768ecd5a3c8 175 SUPERFAMILY SSF81301 8 170 1.74E-46 T 11-10-2018 ABE28_023990 51c8b265fab5dd896bd9b768ecd5a3c8 175 Gene3D G3DSA:3.30.460.10 2 170 1.7E-50 T 11-10-2018 ABE28_023990 51c8b265fab5dd896bd9b768ecd5a3c8 175 Pfam PF04229 GrpB protein 8 162 3.0E-44 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase ABE28_018760 f006a9d923f3e4bf2c7c8dfb0bf143db 327 SUPERFAMILY SSF51735 1 326 3.0E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018760 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 4 319 6.4E-69 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ABE28_018760 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Gene3D G3DSA:3.30.1780.10 4 322 4.9E-100 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 ABE28_018760 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Gene3D G3DSA:3.40.50.720 124 300 4.9E-100 T 11-10-2018 ABE28_018760 f006a9d923f3e4bf2c7c8dfb0bf143db 327 PIRSF PIRSF001439 1 327 4.5E-86 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ABE28_018720 f006a9d923f3e4bf2c7c8dfb0bf143db 327 SUPERFAMILY SSF51735 1 326 3.0E-93 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018720 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 4 319 6.4E-69 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ABE28_018720 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Gene3D G3DSA:3.30.1780.10 4 322 4.9E-100 T 11-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 ABE28_018720 f006a9d923f3e4bf2c7c8dfb0bf143db 327 Gene3D G3DSA:3.40.50.720 124 300 4.9E-100 T 11-10-2018 ABE28_018720 f006a9d923f3e4bf2c7c8dfb0bf143db 327 PIRSF PIRSF001439 1 327 4.5E-86 T 11-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 Gene3D G3DSA:2.40.180.20 36 289 4.6E-99 T 11-10-2018 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 SUPERFAMILY SSF56634 16 306 2.36E-72 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 Gene3D G3DSA:1.20.1280.120 15 303 4.6E-99 T 11-10-2018 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 Pfam PF00199 Catalase 30 305 3.9E-32 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 SMART SM01060 4 310 1.2E-7 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_005445 cd133a631177796f492ab950c9e5fdc8 310 PIRSF PIRSF000296 2 310 7.2E-89 T 11-10-2018 IPR024168 Catalase, SrpA-type, predicted ABE28_003365 fe36061290f895f4b4e58360bf477177 475 SMART SM00388 238 306 7.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 434 1.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 475 1.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 420 1.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 1.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 SUPERFAMILY SSF47384 224 306 4.51E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 Gene3D G3DSA:1.10.287.130 231 306 2.2E-16 T 11-10-2018 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 SMART SM00387 352 475 2.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003365 fe36061290f895f4b4e58360bf477177 475 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 474 2.8E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_003365 fe36061290f895f4b4e58360bf477177 475 Gene3D G3DSA:3.30.565.10 307 475 1.1E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_003365 fe36061290f895f4b4e58360bf477177 475 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 301 7.1E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_003365 fe36061290f895f4b4e58360bf477177 475 SUPERFAMILY SSF55874 295 475 5.5E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 Gene3D G3DSA:1.10.10.10 84 170 3.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 86 164 3.6E-32 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 6 81 1.8E-6 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 85 164 2.9E-36 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 SUPERFAMILY SSF46767 84 164 8.11E-32 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 135 141 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 SUPERFAMILY SSF53155 4 81 9.81E-15 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_018125 fda24f0888686ba964fd06ab36c97352 174 Gene3D G3DSA:3.30.160.70 1 83 9.5E-11 T 11-10-2018 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 SUPERFAMILY SSF53613 1 299 1.71E-80 T 11-10-2018 IPR029056 Ribokinase-like ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 1.4E-68 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 26.169 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 2.5E-113 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 Gene3D G3DSA:3.40.1190.20 1 305 9.8E-102 T 11-10-2018 IPR029056 Ribokinase-like ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 PRINTS PR00990 Ribokinase signature 32 51 1.8E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 PRINTS PR00990 Ribokinase signature 217 228 1.8E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 PRINTS PR00990 Ribokinase signature 5 26 1.8E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 PRINTS PR00990 Ribokinase signature 104 117 1.8E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_010140 74d040d82e85f4a41e24057bb33f888d 306 PRINTS PR00990 Ribokinase signature 173 188 1.8E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_022375 6c779f0cc6b12c9aad4dfca9f15606ed 287 Gene3D G3DSA:3.30.70.120 199 274 2.0E-24 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_022375 6c779f0cc6b12c9aad4dfca9f15606ed 287 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 221 3.8E-67 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_022375 6c779f0cc6b12c9aad4dfca9f15606ed 287 PIRSF PIRSF006483 1 287 3.5E-88 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_022375 6c779f0cc6b12c9aad4dfca9f15606ed 287 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 1.3E-19 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_006300 19cae09ff5bfa8bcbe61300fa90efa5c 240 SUPERFAMILY SSF53474 3 236 6.57E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006300 19cae09ff5bfa8bcbe61300fa90efa5c 240 Gene3D G3DSA:3.40.50.1820 1 240 4.9E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006300 19cae09ff5bfa8bcbe61300fa90efa5c 240 Pfam PF00756 Putative esterase 15 238 3.0E-50 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ABE28_009425 f1d691ef84bf8e6d0bbec003f48aaa3f 278 Pfam PF00268 Ribonucleotide reductase, small chain 8 214 1.5E-19 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_009425 f1d691ef84bf8e6d0bbec003f48aaa3f 278 SUPERFAMILY SSF47240 2 220 3.25E-40 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_009425 f1d691ef84bf8e6d0bbec003f48aaa3f 278 Gene3D G3DSA:1.10.620.20 1 278 3.0E-95 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 Gene3D G3DSA:3.30.70.360 177 288 1.7E-137 T 11-10-2018 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 PIRSF PIRSF001123 4 96 0.0053 T 11-10-2018 IPR008007 Peptidase M42 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 PIRSF PIRSF001123 80 211 4.5E-7 T 11-10-2018 IPR008007 Peptidase M42 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 PIRSF PIRSF001123 278 372 5.7E-4 T 11-10-2018 IPR008007 Peptidase M42 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 6 367 4.2E-164 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 105 143 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 SUPERFAMILY SSF53187 5 369 3.67E-66 T 11-10-2018 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 SUPERFAMILY SSF55031 180 285 2.22E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 Pfam PF01546 Peptidase family M20/M25/M40 74 368 2.5E-23 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 72 81 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 Gene3D G3DSA:3.40.630.10 14 363 1.7E-137 T 11-10-2018 ABE28_014795 99fb06ea425f51c2aa7e82ee15efde55 372 Pfam PF07687 Peptidase dimerisation domain 182 273 1.0E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_000485 2d244702f1221da61ce2ca4460187671 140 PIRSF PIRSF005520 1 139 7.7E-54 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family ABE28_000485 2d244702f1221da61ce2ca4460187671 140 Gene3D G3DSA:1.10.1520.10 4 139 3.6E-51 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABE28_000485 2d244702f1221da61ce2ca4460187671 140 Pfam PF00636 Ribonuclease III domain 17 116 2.6E-15 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABE28_000485 2d244702f1221da61ce2ca4460187671 140 SMART SM00535 1 137 1.4E-6 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABE28_000485 2d244702f1221da61ce2ca4460187671 140 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 7 133 31.431 T 11-10-2018 IPR008226 Mini-ribonuclease 3 family ABE28_000485 2d244702f1221da61ce2ca4460187671 140 SUPERFAMILY SSF69065 9 133 4.01E-44 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABE28_007505 333557e68e1dc439efaaac2cc00bd15d 325 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007505 333557e68e1dc439efaaac2cc00bd15d 325 ProSitePatterns PS01348 MraY family signature 2. 169 180 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007505 333557e68e1dc439efaaac2cc00bd15d 325 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 323 24.888 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007505 333557e68e1dc439efaaac2cc00bd15d 325 Pfam PF00953 Glycosyl transferase family 4 83 249 9.8E-41 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 ABE28_007505 333557e68e1dc439efaaac2cc00bd15d 325 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 324 8.2E-123 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_008745 449861981b8f48838da5ab2b3574ffa1 422 Gene3D G3DSA:3.40.640.10 58 271 6.3E-183 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_008745 449861981b8f48838da5ab2b3574ffa1 422 Pfam PF06838 Methionine gamma-lyase 13 414 5.7E-210 T 11-10-2018 IPR009651 Putative methionine gamma-lyase ABE28_008745 449861981b8f48838da5ab2b3574ffa1 422 SUPERFAMILY SSF53383 58 398 2.56E-50 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_008745 449861981b8f48838da5ab2b3574ffa1 422 Gene3D G3DSA:3.90.1150.60 17 411 6.3E-183 T 11-10-2018 ABE28_019410 9742d63942aeb1f74042e031bbe40c61 417 SUPERFAMILY SSF51556 68 372 3.58E-72 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_019410 9742d63942aeb1f74042e031bbe40c61 417 Gene3D G3DSA:2.30.40.10 29 402 5.6E-110 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019410 9742d63942aeb1f74042e031bbe40c61 417 SUPERFAMILY SSF51338 26 80 7.4E-8 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019410 9742d63942aeb1f74042e031bbe40c61 417 Pfam PF07969 Amidohydrolase family 152 402 1.1E-17 T 11-10-2018 IPR013108 Amidohydrolase 3 ABE28_019410 9742d63942aeb1f74042e031bbe40c61 417 Gene3D G3DSA:3.20.20.140 68 362 5.6E-110 T 11-10-2018 ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 SUPERFAMILY SSF75712 470 571 9.29E-5 T 11-10-2018 ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 Pfam PF13558 Putative exonuclease SbcCD, C subunit 935 999 6.0E-14 T 11-10-2018 ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 Gene3D G3DSA:3.40.50.300 883 1037 7.0E-23 T 11-10-2018 ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 SUPERFAMILY SSF52540 28 1024 6.35E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 Gene3D G3DSA:3.40.50.300 1 233 7.8E-40 T 11-10-2018 ABE28_010065 57f8caaafcb55435aeea455e067390e2 1043 Pfam PF13476 AAA domain 6 210 3.5E-25 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABE28_008910 ce29c7fdc45e0f0c9acfe21e084580eb 148 Pfam PF07374 Protein of unknown function (DUF1492) 71 130 2.1E-5 T 11-10-2018 IPR010861 Protein of unknown function DUF1492 ABE28_004645 e3f09090b89c31cb311ef9e5452205f7 228 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 27 227 4.8E-62 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ABE28_004645 e3f09090b89c31cb311ef9e5452205f7 228 Gene3D G3DSA:3.40.50.300 1 228 2.2E-67 T 11-10-2018 ABE28_004645 e3f09090b89c31cb311ef9e5452205f7 228 SUPERFAMILY SSF52540 46 224 1.98E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004645 e3f09090b89c31cb311ef9e5452205f7 228 Pfam PF13614 AAA domain 57 208 4.0E-13 T 11-10-2018 IPR025669 AAA domain ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 SUPERFAMILY SSF46894 138 210 1.39E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 5.2E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 SUPERFAMILY SSF52172 1 134 1.85E-34 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 3.2E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 SMART SM00421 146 203 4.7E-25 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 Gene3D G3DSA:3.40.50.12740 2 209 5.1E-75 T 11-10-2018 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 SMART SM00448 2 115 2.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_018230 197bee38f9c1b4e0f4b6260ae6158837 212 Pfam PF00072 Response regulator receiver domain 4 115 3.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 Gene3D G3DSA:3.40.50.720 1 261 3.1E-89 T 11-10-2018 ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 251 9.0E-66 T 11-10-2018 ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.1E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_004715 4cf214a987c459e9d5602dddf37274a8 261 SUPERFAMILY SSF51735 6 251 2.58E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_001080 72ba1fbf8e75105595339152df62478e 296 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 185 206 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ABE28_001080 72ba1fbf8e75105595339152df62478e 296 Gene3D G3DSA:1.10.4030.30 58 272 1.5E-49 T 11-10-2018 ABE28_001080 72ba1fbf8e75105595339152df62478e 296 SUPERFAMILY SSF109998 32 186 3.34E-28 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABE28_001080 72ba1fbf8e75105595339152df62478e 296 Gene3D G3DSA:3.10.50.40 157 248 1.5E-49 T 11-10-2018 ABE28_001080 72ba1fbf8e75105595339152df62478e 296 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 74 123 2.1E-4 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ABE28_001080 72ba1fbf8e75105595339152df62478e 296 SUPERFAMILY SSF54534 139 245 1.31E-31 T 11-10-2018 ABE28_001080 72ba1fbf8e75105595339152df62478e 296 Pfam PF13616 PPIC-type PPIASE domain 155 248 1.8E-26 T 11-10-2018 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Gene3D G3DSA:3.10.450.100 28 147 2.0E-14 T 11-10-2018 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Gene3D G3DSA:3.40.710.10 341 676 2.0E-80 T 11-10-2018 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 SUPERFAMILY SSF56519 156 341 3.14E-39 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 SUPERFAMILY SSF56601 342 672 3.42E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Gene3D G3DSA:3.30.1390.30 180 252 8.1E-47 T 11-10-2018 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Pfam PF00905 Penicillin binding protein transpeptidase domain 359 668 8.4E-55 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Pfam PF03717 Penicillin-binding Protein dimerisation domain 161 323 3.7E-37 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 SUPERFAMILY SSF54427 32 150 2.45E-19 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Gene3D G3DSA:3.90.1310.10 161 337 8.1E-47 T 11-10-2018 ABE28_012755 2baaffa6a5c6666171252259c8113b0b 676 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 30 152 4.6E-23 T 11-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 8.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 8.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 SUPERFAMILY SSF51735 3 237 2.06E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-23 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 Gene3D G3DSA:3.40.50.720 1 243 5.8E-65 T 11-10-2018 ABE28_023890 568893baf0a7362ec657d92b6150abb5 244 Pfam PF00106 short chain dehydrogenase 6 196 4.2E-54 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 TIGRFAM TIGR00260 thrC: threonine synthase 7 323 1.2E-105 T 11-10-2018 IPR004450 Threonine synthase-like ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 Gene3D G3DSA:3.40.50.1100 59 155 2.7E-123 T 11-10-2018 ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 Gene3D G3DSA:3.40.50.1100 13 322 2.7E-123 T 11-10-2018 ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 PIRSF PIRSF038945 1 348 9.8E-161 T 11-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 SUPERFAMILY SSF53686 5 337 6.29E-107 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_021615 5175e6192a0fe6f4bff0725c52fedb84 353 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 316 8.2E-78 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_009800 3071836a5394be27e0e39e54998c3c79 117 SUPERFAMILY SSF46785 16 112 4.66E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009800 3071836a5394be27e0e39e54998c3c79 117 Pfam PF01638 HxlR-like helix-turn-helix 26 111 1.1E-31 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type ABE28_009800 3071836a5394be27e0e39e54998c3c79 117 Gene3D G3DSA:1.10.10.10 12 116 3.6E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 2.4E-46 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Gene3D G3DSA:3.10.50.40 151 248 8.4E-93 T 11-10-2018 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 5.3E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 PIRSF PIRSF003095 1 430 3.2E-133 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 TIGRFAM TIGR00115 tig: trigger factor 12 421 8.7E-138 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 SUPERFAMILY SSF102735 1 128 2.35E-40 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 SUPERFAMILY SSF54534 89 243 2.75E-38 T 11-10-2018 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Hamap MF_00303 Trigger factor [tig]. 1 427 23.616 T 11-10-2018 IPR005215 Trigger factor GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 SUPERFAMILY SSF109998 250 428 3.14E-41 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Gene3D G3DSA:1.10.3120.10 117 425 8.4E-93 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Gene3D G3DSA:3.30.70.1050 1 116 1.0E-31 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 ABE28_016505 a68b95bebeef323c25f4d162c2ed6236 430 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 2.8E-42 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 ABE28_010465 9cdfb213a66f89a94e3a60afe121aa38 235 Gene3D G3DSA:1.25.10.10 70 232 3.1E-6 T 11-10-2018 IPR011989 Armadillo-like helical ABE28_010465 9cdfb213a66f89a94e3a60afe121aa38 235 SUPERFAMILY SSF48371 76 230 2.07E-10 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_010465 9cdfb213a66f89a94e3a60afe121aa38 235 Pfam PF14206 Cysteine-rich CPCC 5 77 6.1E-17 T 11-10-2018 IPR025983 Cysteine-rich CPCC domain ABE28_006610 058d31cffda816780543b39b7980904a 268 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 256 7.1E-109 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006610 058d31cffda816780543b39b7980904a 268 SUPERFAMILY SSF53613 1 258 4.99E-84 T 11-10-2018 IPR029056 Ribokinase-like ABE28_006610 058d31cffda816780543b39b7980904a 268 Pfam PF08543 Phosphomethylpyrimidine kinase 11 254 1.4E-99 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ABE28_006610 058d31cffda816780543b39b7980904a 268 Gene3D G3DSA:3.40.1190.20 1 267 2.3E-106 T 11-10-2018 IPR029056 Ribokinase-like ABE28_000490 eec991e49f9779fed934a197f5223496 247 SUPERFAMILY SSF55315 3 76 3.06E-18 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_000490 eec991e49f9779fed934a197f5223496 247 Gene3D G3DSA:3.40.1280.10 75 243 6.2E-56 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_000490 eec991e49f9779fed934a197f5223496 247 SMART SM00967 5 79 4.1E-20 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABE28_000490 eec991e49f9779fed934a197f5223496 247 SUPERFAMILY SSF75217 67 243 9.81E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_000490 eec991e49f9779fed934a197f5223496 247 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 3 242 1.7E-85 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 ABE28_000490 eec991e49f9779fed934a197f5223496 247 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABE28_000490 eec991e49f9779fed934a197f5223496 247 Gene3D G3DSA:3.30.1330.30 1 74 3.5E-13 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_000490 eec991e49f9779fed934a197f5223496 247 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 78 4.4E-21 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABE28_023945 8a26bab31ed67b73080a7f674196b684 162 Pfam PF14039 YusW-like protein 60 151 4.1E-25 T 11-10-2018 IPR025623 YusW-like protein ABE28_012920 8a26bab31ed67b73080a7f674196b684 162 Pfam PF14039 YusW-like protein 60 151 4.1E-25 T 11-10-2018 IPR025623 YusW-like protein ABE28_020825 65bbd6040b61e211f722bc415bc32ed1 249 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 88 116 2.1E-7 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 ABE28_020825 65bbd6040b61e211f722bc415bc32ed1 249 SUPERFAMILY SSF109635 3 89 2.22E-13 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily ABE28_020825 65bbd6040b61e211f722bc415bc32ed1 249 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 5 163 1.4E-52 T 11-10-2018 IPR014240 Regulatory protein, YteA family ABE28_020825 65bbd6040b61e211f722bc415bc32ed1 249 SUPERFAMILY SSF57716 90 120 1.92E-6 T 11-10-2018 ABE28_020825 65bbd6040b61e211f722bc415bc32ed1 249 Gene3D G3DSA:1.20.120.910 1 127 3.0E-29 T 11-10-2018 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 Gene3D G3DSA:3.90.1150.10 6 389 4.3E-188 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 Pfam PF00464 Serine hydroxymethyltransferase 4 380 8.1E-182 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 Gene3D G3DSA:3.40.640.10 33 283 4.3E-188 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 SUPERFAMILY SSF53383 2 411 2.89E-183 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 PIRSF PIRSF000412 1 412 1.3E-172 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABE28_022885 66b7ed91af7c387e611be18fe2edb5d8 413 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.412 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 ABE28_022555 8eff3fde3f191d4ce56b7ca57dd1639b 713 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 334 707 3.0E-128 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ABE28_022555 8eff3fde3f191d4ce56b7ca57dd1639b 713 Gene3D G3DSA:3.40.50.11820 341 700 1.5E-146 T 11-10-2018 ABE28_022555 8eff3fde3f191d4ce56b7ca57dd1639b 713 Gene3D G3DSA:3.40.50.12580 511 693 1.5E-146 T 11-10-2018 ABE28_022555 8eff3fde3f191d4ce56b7ca57dd1639b 713 SUPERFAMILY SSF53756 451 705 5.02E-12 T 11-10-2018 ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.0E-69 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.326 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 Gene3D G3DSA:1.10.455.10 2 156 1.4E-62 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 SUPERFAMILY SSF47973 1 149 3.92E-60 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 PIRSF PIRSF002122 4 156 8.9E-57 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 ABE28_000565 3af9af7a7718723f146dd23a3af34281 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 1.7E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 PRINTS PR01002 Flagellar protein FlgJ signature 110 129 1.3E-6 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 PRINTS PR01002 Flagellar protein FlgJ signature 130 148 1.3E-6 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 1.3E-6 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 SUPERFAMILY SSF54106 159 203 5.75E-10 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 Gene3D G3DSA:3.10.350.10 156 204 8.1E-15 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 Gene3D G3DSA:4.10.80.30 57 82 1.7E-43 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 SMART SM00047 2 153 2.0E-35 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 Pfam PF01476 LysM domain 161 203 3.6E-12 T 11-10-2018 IPR018392 LysM domain ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 Gene3D G3DSA:1.10.530.10 6 153 1.7E-43 T 11-10-2018 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 146 4.5E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 ABE28_009940 b0b5a0aba69fea29ff4cbfc38fa039fd 204 SMART SM00257 160 204 1.1E-13 T 11-10-2018 IPR018392 LysM domain ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 411 433 4.7E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 55 79 4.7E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 81 101 4.7E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 261 283 4.7E-12 T 11-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 6 615 4.1E-196 T 11-10-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 221 242 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 412 431 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 79 104 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 107 127 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 243 269 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 154 175 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 311 323 1.8E-59 T 11-10-2018 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 Pfam PF00361 Proton-conducting membrane transporter 130 419 3.5E-86 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022780 ca3e24da41d1afb56162e9620233a094 623 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 117 2.7E-18 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 176 307 5.8E-62 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 33.459 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Gene3D G3DSA:2.170.150.20 170 316 8.5E-58 T 11-10-2018 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 169 299 37.299 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 SUPERFAMILY SSF55068 2 168 1.7E-65 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 SUPERFAMILY SSF51316 175 314 7.32E-59 T 11-10-2018 IPR011057 Mss4-like superfamily ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Pfam PF01641 SelR domain 180 298 5.5E-48 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Pfam PF01625 Peptide methionine sulfoxide reductase 6 156 5.2E-55 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 Gene3D G3DSA:3.30.1060.10 1 168 1.7E-59 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_023425 edb1041aa9302009df646cb223996fa0 317 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 156 2.4E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 SUPERFAMILY SSF81653 138 235 5.23E-26 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 Pfam PF00122 E1-E2 ATPase 136 316 7.5E-50 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 70 637 2.2E-119 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 185 199 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 535 554 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 336 350 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 471 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 482 492 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 558 570 8.4E-30 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 85 389 3.2E-98 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 SUPERFAMILY SSF81665 87 612 2.22E-17 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 Gene3D G3DSA:2.70.150.20 129 240 7.8E-36 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 Pfam PF00702 haloacid dehalogenase-like hydrolase 333 548 5.9E-35 T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 338 344 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 SUPERFAMILY SSF56784 335 635 8.68E-56 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 85 637 1.3E-183 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 Gene3D G3DSA:3.40.50.1000 317 586 2.4E-84 T 11-10-2018 IPR023214 HAD superfamily ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 ProSitePatterns PS01229 Hypothetical cof family signature 2. 535 557 - T 11-10-2018 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 108 611 3.0E-78 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00941 Cadmium-transporting ATPase signature 140 156 4.1E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00941 Cadmium-transporting ATPase signature 65 77 4.1E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00941 Cadmium-transporting ATPase signature 201 217 4.1E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00941 Cadmium-transporting ATPase signature 120 140 4.1E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 PRINTS PR00941 Cadmium-transporting ATPase signature 220 234 4.1E-15 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_002725 0d18100abc248ad9b72d058f458a13c9 640 Gene3D G3DSA:3.40.1110.10 347 467 2.4E-84 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_012760 3eb57f1d6d596430dfeae34283944efc 128 SUPERFAMILY SSF46785 5 123 5.21E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012760 3eb57f1d6d596430dfeae34283944efc 128 PIRSF PIRSF019455 1 128 1.1E-37 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ABE28_012760 3eb57f1d6d596430dfeae34283944efc 128 Gene3D G3DSA:1.10.10.10 6 72 7.7E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012760 3eb57f1d6d596430dfeae34283944efc 128 Gene3D G3DSA:1.10.4040.10 73 122 2.2E-19 T 11-10-2018 ABE28_012760 3eb57f1d6d596430dfeae34283944efc 128 Pfam PF03965 Penicillinase repressor 7 120 1.7E-37 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ABE28_014475 d52226ce977062197fce5259f17f81df 595 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 588 1.2E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_014475 d52226ce977062197fce5259f17f81df 595 Pfam PF00512 His Kinase A (phospho-acceptor) domain 366 432 4.8E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_014475 d52226ce977062197fce5259f17f81df 595 Gene3D G3DSA:1.10.287.130 359 434 1.9E-25 T 11-10-2018 ABE28_014475 d52226ce977062197fce5259f17f81df 595 Gene3D G3DSA:3.30.565.10 435 592 7.9E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014475 d52226ce977062197fce5259f17f81df 595 Gene3D G3DSA:1.20.1480.50 156 252 3.6E-19 T 11-10-2018 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SUPERFAMILY SSF55874 421 590 6.29E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014475 d52226ce977062197fce5259f17f81df 595 Gene3D G3DSA:3.30.450.20 255 358 1.6E-7 T 11-10-2018 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SUPERFAMILY SSF47384 349 434 7.46E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SMART SM00304 194 246 8.1E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_014475 d52226ce977062197fce5259f17f81df 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 544 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_014475 d52226ce977062197fce5259f17f81df 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_014475 d52226ce977062197fce5259f17f81df 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_014475 d52226ce977062197fce5259f17f81df 595 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 530 1.5E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SUPERFAMILY SSF55785 241 357 1.37E-7 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_014475 d52226ce977062197fce5259f17f81df 595 SUPERFAMILY SSF158472 195 242 7.45E-10 T 11-10-2018 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SMART SM00388 365 432 7.9E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_014475 d52226ce977062197fce5259f17f81df 595 Pfam PF00672 HAMP domain 195 241 5.7E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_014475 d52226ce977062197fce5259f17f81df 595 SMART SM00387 478 591 3.5E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_021125 de7ccd8ac6538f4c2350862a403bc650 142 Pfam PF07486 Cell Wall Hydrolase 24 128 9.8E-18 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 ABE28_021125 de7ccd8ac6538f4c2350862a403bc650 142 Gene3D G3DSA:1.10.10.2520 8 91 1.2E-11 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Pfam PF14791 DNA polymerase beta thumb 255 316 2.9E-19 T 11-10-2018 IPR029398 DNA polymerase beta, thumb domain ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 PIRSF PIRSF005047 3 572 1.5E-238 T 11-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SUPERFAMILY SSF47802 2 80 2.75E-20 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SUPERFAMILY SSF89550 338 569 3.4E-55 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Gene3D G3DSA:1.10.150.110 1 84 8.7E-20 T 11-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Pfam PF14520 Helix-hairpin-helix domain 92 145 1.6E-6 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Gene3D G3DSA:3.20.20.140 327 572 1.6E-75 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SUPERFAMILY SSF81301 154 316 8.5E-44 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Gene3D G3DSA:1.10.150.20 85 149 4.0E-20 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SMART SM00278 90 109 130.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SMART SM00278 50 69 17.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SMART SM00278 125 144 19.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Gene3D G3DSA:3.30.460.10 154 260 3.4E-22 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Gene3D G3DSA:3.30.210.10 261 326 3.1E-18 T 11-10-2018 IPR037160 DNA polymerase, thumb domain superfamily ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SMART SM00481 338 417 3.1E-22 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SUPERFAMILY SSF158702 67 145 6.02E-5 T 11-10-2018 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 SMART SM00483 2 316 4.8E-75 T 11-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Pfam PF14716 Helix-hairpin-helix domain 6 70 6.1E-19 T 11-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain ABE28_016730 e3ceb21adfab0315acdb50a2340814d1 572 Pfam PF02811 PHP domain 339 456 7.3E-9 T 11-10-2018 IPR004013 PHP domain GO:0003824 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 26 548 4.4E-225 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 SUPERFAMILY SSF52374 25 342 2.12E-97 T 11-10-2018 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 31 42 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 25 333 3.3E-109 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Gene3D G3DSA:3.40.50.620 25 243 2.4E-100 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 336 527 7.9E-58 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Gene3D G3DSA:1.10.1160.10 257 335 1.1E-34 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 548 50.58 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Gene3D G3DSA:3.90.800.10 97 205 2.4E-100 T 11-10-2018 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Gene3D G3DSA:2.40.240.10 344 462 1.1E-77 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 SUPERFAMILY SSF50715 336 546 1.36E-72 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 Gene3D G3DSA:2.40.240.10 336 545 1.1E-77 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 216 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 57 70 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 28 40 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_023415 9dc3e69fbe22e1df4a850e50ae296fe4 550 PRINTS PR00987 Glutamyl-tRNA synthetase signature 42 53 3.2E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 ABE28_015500 b008121385537d50625bfcb202d28424 313 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 8.1E-108 T 11-10-2018 ABE28_015500 b008121385537d50625bfcb202d28424 313 PIRSF PIRSF000401 1 313 6.5E-111 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABE28_015500 b008121385537d50625bfcb202d28424 313 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 9.4E-104 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABE28_015500 b008121385537d50625bfcb202d28424 313 Gene3D G3DSA:3.40.50.150 116 313 7.3E-64 T 11-10-2018 ABE28_015500 b008121385537d50625bfcb202d28424 313 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.646 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 ABE28_015500 b008121385537d50625bfcb202d28424 313 SUPERFAMILY SSF53335 98 310 4.93E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 PRINTS PR00045 Sigma-54 factor signature 340 352 4.9E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 PRINTS PR00045 Sigma-54 factor signature 356 367 4.9E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 PRINTS PR00045 Sigma-54 factor signature 154 171 4.9E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 PRINTS PR00045 Sigma-54 factor signature 416 434 4.9E-24 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 Gene3D G3DSA:1.10.10.60 383 440 8.1E-23 T 11-10-2018 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 328 347 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 11 440 2.0E-128 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 Gene3D G3DSA:1.10.10.1330 89 202 7.0E-20 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 421 428 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 Pfam PF04552 Sigma-54, DNA binding domain 281 441 1.8E-59 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 7 50 2.4E-13 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 PIRSF PIRSF000774 1 443 5.7E-129 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 ABE28_022160 3de1c33aacc6d4dcbb91cb37aebbfa5f 443 Pfam PF04963 Sigma-54 factor, core binding domain 82 267 3.2E-48 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 Gene3D G3DSA:2.115.10.20 30 350 6.0E-158 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 SUPERFAMILY SSF75005 27 341 4.08E-111 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 35 341 1.3E-103 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 SUPERFAMILY SSF49899 341 494 2.69E-34 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 344 490 1.2E-31 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 SMART SM00640 35 457 1.4E-148 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 Gene3D G3DSA:2.60.120.560 351 480 6.0E-158 T 11-10-2018 ABE28_011620 d5205cb341d55c872af7c559f72cdca7 507 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 468 8.4E-153 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 2.0E-135 T 11-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 5.0E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 SUPERFAMILY SSF88659 143 237 4.67E-22 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 Pfam PF04545 Sigma-70, region 4 180 233 8.5E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 3.0E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 SUPERFAMILY SSF88946 26 131 1.57E-35 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 Gene3D G3DSA:1.20.120.1810 30 131 2.3E-25 T 11-10-2018 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 PIRSF PIRSF000770 4 239 3.7E-79 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007545 9b03070eedc1a9e06bdf115ebe6292de 239 Gene3D G3DSA:1.10.10.10 168 239 5.3E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 Gene3D G3DSA:3.40.50.10490 95 282 6.2E-50 T 11-10-2018 ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 Gene3D G3DSA:1.10.10.10 1 83 2.5E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 77 5.9E-25 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 SUPERFAMILY SSF53697 94 278 4.19E-42 T 11-10-2018 ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 SUPERFAMILY SSF46689 5 79 3.05E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_010815 fce8a6adbdcedbf64094e639f1aba827 285 Pfam PF01380 SIS domain 127 256 4.0E-23 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 5.3E-10 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Gene3D G3DSA:3.40.50.300 1 243 1.7E-82 T 11-10-2018 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 44.65 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Gene3D G3DSA:3.40.50.300 414 595 7.2E-54 T 11-10-2018 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 SUPERFAMILY SSF52540 324 582 8.4E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 SUPERFAMILY SSF46600 615 659 5.1E-10 T 11-10-2018 IPR036876 UVR domain superfamily ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 SMART SM00490 459 545 1.4E-20 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Gene3D G3DSA:3.40.50.300 273 413 3.9E-53 T 11-10-2018 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 SUPERFAMILY SSF52540 3 414 1.03E-141 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 SMART SM00487 9 425 1.2E-24 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Pfam PF02151 UvrB/uvrC motif 626 659 5.4E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Pfam PF00271 Helicase conserved C-terminal domain 440 544 2.2E-19 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_022305 50293551d1fc19ada1d54139e3b93bea 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 9.1E-22 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 SUPERFAMILY SSF52540 1 233 1.41E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 Gene3D G3DSA:3.40.50.300 2 244 9.0E-56 T 11-10-2018 ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 257 445 7.0E-51 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 Gene3D G3DSA:3.40.50.880 257 438 8.6E-20 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 501 175.971 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 6 237 9.4E-23 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 SUPERFAMILY SSF52317 259 454 3.0E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_010625 6ce031d6fdd7298b95de59924b4f2328 505 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 6 494 1.2E-173 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 ABE28_023605 58c975dceeae351727800168a756b362 493 PIRSF PIRSF001021 1 487 4.6E-211 T 11-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 ABE28_023605 58c975dceeae351727800168a756b362 493 Gene3D G3DSA:2.40.30.140 104 207 5.8E-159 T 11-10-2018 ABE28_023605 58c975dceeae351727800168a756b362 493 Gene3D G3DSA:2.60.40.1180 397 483 6.8E-31 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_023605 58c975dceeae351727800168a756b362 493 SUPERFAMILY SSF51445 5 375 9.34E-100 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_023605 58c975dceeae351727800168a756b362 493 Pfam PF00128 Alpha amylase, catalytic domain 25 373 6.6E-32 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_023605 58c975dceeae351727800168a756b362 493 SMART SM00642 5 391 1.8E-58 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_023605 58c975dceeae351727800168a756b362 493 Gene3D G3DSA:3.20.20.80 6 372 5.8E-159 T 11-10-2018 ABE28_023605 58c975dceeae351727800168a756b362 493 SUPERFAMILY SSF51011 395 482 4.03E-31 T 11-10-2018 ABE28_015310 916386706330e055a32e928da83d17f6 254 Gene3D G3DSA:3.40.50.300 2 241 2.9E-63 T 11-10-2018 ABE28_015310 916386706330e055a32e928da83d17f6 254 Pfam PF00005 ABC transporter 24 172 8.2E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_015310 916386706330e055a32e928da83d17f6 254 SMART SM00382 33 222 9.2E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_015310 916386706330e055a32e928da83d17f6 254 SUPERFAMILY SSF52540 5 221 8.75E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015310 916386706330e055a32e928da83d17f6 254 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_009415 93ecc1272bbd72c663b79385f2dc688d 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.1E-23 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009415 93ecc1272bbd72c663b79385f2dc688d 72 SUPERFAMILY SSF47413 1 70 1.44E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_009415 93ecc1272bbd72c663b79385f2dc688d 72 Gene3D G3DSA:1.10.260.40 3 71 2.5E-10 T 11-10-2018 ABE28_009415 93ecc1272bbd72c663b79385f2dc688d 72 SMART SM00530 6 62 4.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_007870 a352dafd1b12b15a54ff5a240ffbca4b 261 Pfam PF01351 Ribonuclease HII 76 251 4.3E-34 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain ABE28_007870 a352dafd1b12b15a54ff5a240ffbca4b 261 Hamap MF_00052_B Ribonuclease HII [rnhB]. 74 252 36.109 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 ABE28_007870 a352dafd1b12b15a54ff5a240ffbca4b 261 Gene3D G3DSA:3.30.420.10 50 261 3.5E-77 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_007870 a352dafd1b12b15a54ff5a240ffbca4b 261 SUPERFAMILY SSF53098 63 256 1.4E-67 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 130 144 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 195 212 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 92 107 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 174 186 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 272 284 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 212 231 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 52 66 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 PRINTS PR00819 CbxX/CfqX superfamily signature 144 163 2.9E-61 T 11-10-2018 IPR000641 CbxX/CfqX GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 Gene3D G3DSA:1.10.8.60 225 314 2.8E-18 T 11-10-2018 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 49 310 3.1E-133 T 11-10-2018 IPR014232 Sporulation stage V, protein K ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 220 7.9E-19 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 SMART SM00382 89 227 3.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 Gene3D G3DSA:3.40.50.300 30 224 2.0E-56 T 11-10-2018 ABE28_008730 d38e6274ae89a6605e033dd672f8c4c7 318 SUPERFAMILY SSF52540 49 309 2.49E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 Gene3D G3DSA:3.40.50.720 1 258 4.0E-82 T 11-10-2018 ABE28_018595 09abef09dcc20d768e127452d3da490c 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_018595 09abef09dcc20d768e127452d3da490c 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 5 258 2.2E-111 T 11-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.3E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018595 09abef09dcc20d768e127452d3da490c 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 2.3E-64 T 11-10-2018 ABE28_018595 09abef09dcc20d768e127452d3da490c 258 SUPERFAMILY SSF51735 3 257 2.66E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Pfam PF03764 Elongation factor G, domain IV 477 595 1.3E-45 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Gene3D G3DSA:3.40.50.300 1 291 2.6E-111 T 11-10-2018 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SMART SM00838 598 685 1.4E-59 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Gene3D G3DSA:3.30.230.10 482 685 2.1E-94 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Pfam PF14492 Elongation Factor G, domain II 402 475 1.3E-35 T 11-10-2018 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SUPERFAMILY SSF50447 247 400 3.79E-36 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Gene3D G3DSA:3.30.70.870 404 481 1.3E-33 T 11-10-2018 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Gene3D G3DSA:2.40.30.10 292 403 1.4E-47 T 11-10-2018 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 180 5.8E-43 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SUPERFAMILY SSF52540 6 280 6.53E-109 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.2E-32 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SUPERFAMILY SSF54211 477 597 3.79E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 1.2E-69 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Gene3D G3DSA:3.30.70.240 602 672 2.1E-94 T 11-10-2018 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 2.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.916 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SUPERFAMILY SSF54980 402 479 3.53E-25 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SUPERFAMILY SSF54980 601 688 1.06E-31 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 SMART SM00889 478 596 2.9E-73 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000570 3f1dbd45cc1f91e3ed19a99a635fa9b6 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 5.4E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006145 a86f04797825766b3098812417db6c45 222 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 216 2.0E-48 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_006145 a86f04797825766b3098812417db6c45 222 Hamap MF_01124 Adapter protein MecA [mecA]. 1 221 26.521 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_006145 a86f04797825766b3098812417db6c45 222 PIRSF PIRSF029008 1 222 3.5E-70 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_006145 a86f04797825766b3098812417db6c45 222 Gene3D G3DSA:3.30.70.1950 125 222 1.1E-28 T 11-10-2018 IPR038471 MecA, C-terminal domain superfamily ABE28_001525 050dd25c07ee9dfb5d0e4e1a505f2edb 150 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 10 133 4.6E-40 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABE28_001525 050dd25c07ee9dfb5d0e4e1a505f2edb 150 SUPERFAMILY SSF52540 22 121 5.58E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001525 050dd25c07ee9dfb5d0e4e1a505f2edb 150 Gene3D G3DSA:3.40.50.300 1 149 4.9E-39 T 11-10-2018 ABE28_001525 050dd25c07ee9dfb5d0e4e1a505f2edb 150 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 127 2.7E-36 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 ABE28_021545 89f4020ad0a0512ddd8546254ef4b7a1 262 Pfam PF01497 Periplasmic binding protein 3 230 7.5E-23 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_021545 89f4020ad0a0512ddd8546254ef4b7a1 262 Gene3D G3DSA:3.40.50.1980 123 255 3.7E-24 T 11-10-2018 ABE28_021545 89f4020ad0a0512ddd8546254ef4b7a1 262 SUPERFAMILY SSF53807 2 256 9.81E-53 T 11-10-2018 ABE28_021545 89f4020ad0a0512ddd8546254ef4b7a1 262 Gene3D G3DSA:3.40.50.1980 1 118 5.1E-25 T 11-10-2018 ABE28_020255 69472682d2b2e428134498b5edb3e39a 142 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 18 140 4.4E-15 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ABE28_020255 69472682d2b2e428134498b5edb3e39a 142 Gene3D G3DSA:3.30.530.20 1 141 7.7E-43 T 11-10-2018 IPR023393 START-like domain superfamily ABE28_020255 69472682d2b2e428134498b5edb3e39a 142 SUPERFAMILY SSF55961 6 141 1.73E-41 T 11-10-2018 ABE28_006465 972d7708bcaa9373270aa31b39395513 344 Gene3D G3DSA:3.30.360.10 128 340 1.9E-79 T 11-10-2018 ABE28_006465 972d7708bcaa9373270aa31b39395513 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 122 3.9E-31 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_006465 972d7708bcaa9373270aa31b39395513 344 SUPERFAMILY SSF51735 3 151 7.41E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006465 972d7708bcaa9373270aa31b39395513 344 Gene3D G3DSA:3.40.50.720 6 318 1.9E-79 T 11-10-2018 ABE28_006465 972d7708bcaa9373270aa31b39395513 344 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 231 9.4E-10 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_006465 972d7708bcaa9373270aa31b39395513 344 SUPERFAMILY SSF55347 132 275 6.7E-23 T 11-10-2018 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 616 686 2.1E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 SMART SM01086 616 703 3.7E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 SMART SM00382 448 595 7.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 SMART SM00382 121 265 2.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Pfam PF07724 AAA domain (Cdc48 subfamily) 447 610 1.1E-49 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 SUPERFAMILY SSF52540 397 684 5.49E-77 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 482 500 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Gene3D G3DSA:3.40.50.300 402 614 3.8E-82 T 11-10-2018 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 126 246 5.2E-12 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 SUPERFAMILY SSF52540 83 351 1.99E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Gene3D G3DSA:3.40.50.300 71 262 8.5E-66 T 11-10-2018 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 559 573 9.0E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 452 470 9.0E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 497 515 9.0E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 526 544 9.0E-37 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Gene3D G3DSA:1.10.8.60 616 705 1.6E-20 T 11-10-2018 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 Gene3D G3DSA:4.10.860.10 335 377 3.2E-8 T 11-10-2018 ABE28_011870 e51e8a8f984b119d8f52c9e66bb2029d 707 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 216 228 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 4.1E-130 T 11-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 SUPERFAMILY SSF53335 3 233 1.32E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 Gene3D G3DSA:3.40.50.150 16 234 1.7E-62 T 11-10-2018 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 5.1E-78 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 Pfam PF01209 ubiE/COQ5 methyltransferase family 2 233 8.7E-98 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABE28_014275 37a86bf84c348b15d56b5c0795401d19 236 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 34.76 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 Pfam PF04542 Sigma-70 region 2 21 88 3.9E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 Gene3D G3DSA:1.10.10.10 114 176 5.9E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 SUPERFAMILY SSF88659 109 170 1.53E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 Gene3D G3DSA:1.10.1740.10 1 113 2.3E-23 T 11-10-2018 ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 170 8.5E-28 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 SUPERFAMILY SSF88946 3 91 7.46E-25 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_005420 2e8c1e1f69192c6d9ef359cd75527fa9 187 Pfam PF08281 Sigma-70, region 4 115 165 9.5E-12 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 Pfam PF00753 Metallo-beta-lactamase superfamily 513 722 4.3E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 89 752 2.3E-138 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 SUPERFAMILY SSF56281 506 758 3.8E-45 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 SMART SM00849 513 723 1.7E-7 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 Pfam PF03772 Competence protein 214 475 6.6E-63 T 11-10-2018 IPR004477 ComEC/Rec2-related protein ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 Gene3D G3DSA:3.60.15.10 504 765 1.4E-69 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 Pfam PF13567 Domain of unknown function (DUF4131) 24 173 9.1E-10 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 ABE28_015565 1377cb39e5cceb14f7a5e5e62c52a45f 770 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 235 404 2.2E-36 T 11-10-2018 IPR004477 ComEC/Rec2-related protein ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.3E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 SMART SM00448 2 112 3.1E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 SUPERFAMILY SSF52172 3 173 7.03E-39 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 Pfam PF00072 Response regulator receiver domain 4 112 6.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 Gene3D G3DSA:1.10.10.10 127 225 6.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 SMART SM00862 145 220 5.4E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_002195 9deccd41a0e580df792d16e26dd55803 225 Gene3D G3DSA:3.40.50.2300 2 126 7.0E-33 T 11-10-2018 ABE28_007575 ac03688b268a86fa6314b0194cc41c9c 88 Pfam PF02325 YGGT family 9 76 6.2E-25 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 ABE28_021670 7e79f2dfab5687fa3af03cef61d77480 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 1.4E-38 T 11-10-2018 IPR009370 Protein of unknown function DUF1027 ABE28_021670 7e79f2dfab5687fa3af03cef61d77480 91 PIRSF PIRSF012565 1 91 2.5E-48 T 11-10-2018 IPR009370 Protein of unknown function DUF1027 ABE28_021670 7e79f2dfab5687fa3af03cef61d77480 91 Gene3D G3DSA:3.50.4.20 1 91 9.4E-43 T 11-10-2018 IPR038141 YutD-like superfamily ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 7 503 5.3E-94 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 7 494 16.045 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PIRSF PIRSF002869 3 507 8.9E-100 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 Pfam PF03023 MviN-like protein 32 459 5.2E-77 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 37 56 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 257 283 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 406 423 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 133 157 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 157 178 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_022530 266c15ffddce494046b97f6e17ce730d 508 PRINTS PR01806 Virulence factor MviN signature 354 373 3.3E-29 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 Gene3D G3DSA:3.30.160.660 409 549 5.5E-44 T 11-10-2018 ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 Gene3D G3DSA:1.10.490.140 271 602 5.5E-44 T 11-10-2018 ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 67 233 3.4E-44 T 11-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 263 601 1.7E-89 T 11-10-2018 IPR003776 YcaO-like domain ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 Gene3D G3DSA:3.40.50.720 2 186 4.1E-28 T 11-10-2018 ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 263 646 7.0E-129 T 11-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component ABE28_019390 4909482d1bfa0058965b025f4c6aa6bb 646 Gene3D G3DSA:2.40.50.820 293 372 5.5E-44 T 11-10-2018 ABE28_023930 52de0c81245c6e9ef0aeb109fad7626e 511 SUPERFAMILY SSF117892 68 210 2.09E-34 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily ABE28_023930 52de0c81245c6e9ef0aeb109fad7626e 511 Pfam PF01145 SPFH domain / Band 7 family 30 220 5.6E-25 T 11-10-2018 IPR001107 Band 7 domain ABE28_023930 52de0c81245c6e9ef0aeb109fad7626e 511 Gene3D G3DSA:3.30.479.30 77 193 1.2E-37 T 11-10-2018 ABE28_023930 52de0c81245c6e9ef0aeb109fad7626e 511 SMART SM00244 119 301 3.8E-10 T 11-10-2018 IPR001107 Band 7 domain ABE28_023930 52de0c81245c6e9ef0aeb109fad7626e 511 Pfam PF15975 Flotillin 368 459 1.4E-13 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 SMART SM00490 256 337 7.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 Pfam PF00271 Helicase conserved C-terminal domain 233 337 3.0E-26 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 Pfam PF00270 DEAD/DEAH box helicase 28 193 2.1E-41 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 SMART SM00487 23 221 9.0E-50 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 SUPERFAMILY SSF52540 72 357 9.77E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 Gene3D G3DSA:3.40.50.300 217 372 2.1E-41 T 11-10-2018 ABE28_002540 3bb4f3eca4b8ed616b35d0b3e94b40b8 379 Gene3D G3DSA:3.40.50.300 8 216 8.8E-60 T 11-10-2018 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 SUPERFAMILY SSF53383 32 433 8.39E-123 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 241 278 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 Gene3D G3DSA:3.90.1150.10 15 432 3.0E-155 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 Pfam PF00202 Aminotransferase class-III 35 432 3.9E-105 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 Gene3D G3DSA:3.40.640.10 70 329 3.0E-155 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 PIRSF PIRSF000521 184 436 4.8E-31 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 PIRSF PIRSF000521 24 147 6.1E-9 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_002515 a4d4636b5ab219b034be3222de8c4d34 441 PIRSF PIRSF000521 138 182 19.0 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 Gene3D G3DSA:3.40.1280.10 1 159 2.7E-66 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 PIRSF PIRSF004505 1 159 7.3E-55 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 31.154 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 SUPERFAMILY SSF75217 1 157 3.14E-61 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 159 1.1E-65 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABE28_023635 cdc8925a624ba1aa36834ebfe4e26476 159 Pfam PF02590 Predicted SPOUT methyltransferase 1 158 2.9E-60 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 Gene3D G3DSA:3.40.50.720 126 272 1.4E-105 T 11-10-2018 ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 SUPERFAMILY SSF51735 130 263 1.09E-17 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 4 289 4.3E-135 T 11-10-2018 IPR014215 Dipicolinic acid synthetase subunit A ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 Gene3D G3DSA:3.40.50.720 7 284 1.4E-105 T 11-10-2018 ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 289 2.0E-8 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABE28_008215 1f93c5ec40c65da84aa2b6f963b7ba7f 300 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 122 2.7E-29 T 11-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.8E-70 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 Gene3D G3DSA:2.60.200.40 123 286 6.6E-88 T 11-10-2018 ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 SUPERFAMILY SSF111331 1 294 2.09E-81 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 Pfam PF00781 Diacylglycerol kinase catalytic domain 3 127 1.8E-37 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 SMART SM00046 3 131 9.9E-17 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_001040 b40525d5d41fd7986700f292daf99f4e 296 Gene3D G3DSA:3.40.50.10330 5 122 6.6E-88 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 SUPERFAMILY SSF51971 131 378 1.47E-63 T 11-10-2018 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 Gene3D G3DSA:3.50.50.60 129 236 4.1E-14 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 13 121 1.2E-39 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 133 434 3.9E-31 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 PRINTS PR00419 Adrenodoxin reductase family signature 157 170 4.9E-17 T 11-10-2018 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 PRINTS PR00419 Adrenodoxin reductase family signature 267 281 4.9E-17 T 11-10-2018 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 PRINTS PR00419 Adrenodoxin reductase family signature 134 156 4.9E-17 T 11-10-2018 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 PRINTS PR00419 Adrenodoxin reductase family signature 199 209 4.9E-17 T 11-10-2018 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 SUPERFAMILY SSF46548 10 143 1.26E-31 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 Gene3D G3DSA:3.50.50.60 237 377 1.1E-41 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_001010 7e77adb4ef07345f6af772d7dc2ccea2 454 Gene3D G3DSA:1.10.1060.10 2 128 9.0E-44 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_010820 fcb49e3cbb350d9d820f7f8939d48836 455 Pfam PF00367 phosphotransferase system, EIIB 13 45 9.2E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_010820 fcb49e3cbb350d9d820f7f8939d48836 455 Pfam PF02378 Phosphotransferase system, EIIC 120 389 1.3E-37 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_010820 fcb49e3cbb350d9d820f7f8939d48836 455 Gene3D G3DSA:3.30.1360.60 2 81 2.3E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_010820 fcb49e3cbb350d9d820f7f8939d48836 455 SUPERFAMILY SSF55604 10 83 8.63E-15 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 SMART SM00257 184 231 9.7E-11 T 11-10-2018 IPR018392 LysM domain ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Pfam PF01476 LysM domain 185 228 4.4E-11 T 11-10-2018 IPR018392 LysM domain ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 SUPERFAMILY SSF47090 266 326 6.47E-13 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 SUPERFAMILY SSF55846 26 152 2.49E-13 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 28 139 2.6E-9 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Pfam PF01471 Putative peptidoglycan binding domain 288 326 6.4E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Gene3D G3DSA:3.40.80.10 13 165 5.9E-18 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Gene3D G3DSA:3.10.350.10 183 230 1.3E-17 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 SUPERFAMILY SSF54106 184 229 9.94E-8 T 11-10-2018 ABE28_003275 c359d84cffb2ff7cbe063839510b7b72 327 Gene3D G3DSA:1.10.101.10 262 327 2.2E-15 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 SUPERFAMILY SSF47323 340 464 2.06E-34 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 8.9E-190 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 1.8E-137 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 SUPERFAMILY SSF52374 3 312 5.38E-102 T 11-10-2018 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 2.3E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 Gene3D G3DSA:1.20.120.640 306 464 2.1E-35 T 11-10-2018 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 SMART SM00840 353 416 1.7E-16 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 Gene3D G3DSA:3.40.50.620 1 305 5.0E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 Pfam PF09190 DALR domain 353 412 3.3E-16 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 ABE28_000480 3263d78da5a320896b87f86814fab5f8 465 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 38.968 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 ABE28_006395 331b9a2140c683fa2a459ea4ad482eb0 321 Pfam PF00753 Metallo-beta-lactamase superfamily 22 235 1.6E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_006395 331b9a2140c683fa2a459ea4ad482eb0 321 Gene3D G3DSA:3.60.15.10 7 263 1.6E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_006395 331b9a2140c683fa2a459ea4ad482eb0 321 SMART SM00849 22 235 2.8E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_006395 331b9a2140c683fa2a459ea4ad482eb0 321 SUPERFAMILY SSF56281 14 308 3.67E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 Gene3D G3DSA:1.20.1480.50 164 261 7.6E-17 T 11-10-2018 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 Pfam PF12729 Four helix bundle sensory module for signal transduction 2 164 3.2E-13 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 384 411 1.0E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 308 337 1.0E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 413 442 1.0E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 SUPERFAMILY SSF58104 229 561 2.09E-64 T 11-10-2018 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 Pfam PF00672 HAMP domain 204 252 7.2E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 SMART SM00283 286 561 1.2E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 511 1.2E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 SMART SM00304 204 257 8.1E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_020685 bbfbb9e9676f0bec5b017dfb3c6d5b77 562 Gene3D G3DSA:1.10.287.950 262 561 4.4E-57 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Pfam PF00122 E1-E2 ATPase 102 279 1.5E-33 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Gene3D G3DSA:3.40.50.1000 489 557 3.3E-24 T 11-10-2018 IPR023214 HAD superfamily ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Gene3D G3DSA:2.70.150.20 95 203 4.7E-23 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Gene3D G3DSA:1.20.1110.10 558 599 3.3E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 SUPERFAMILY SSF81653 109 204 9.15E-21 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 304 310 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 73 336 3.2E-31 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 371 601 6.7E-48 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Pfam PF00702 haloacid dehalogenase-like hydrolase 298 527 6.2E-35 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 677 40.249 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Gene3D G3DSA:1.20.1110.10 204 315 9.9E-6 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 Gene3D G3DSA:3.40.1110.10 316 448 1.7E-42 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 151 165 5.9E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 460 470 5.9E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 302 316 5.9E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 536 548 5.9E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 513 532 5.9E-24 T 11-10-2018 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 SUPERFAMILY SSF56784 290 556 3.99E-42 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_011375 2462a6b367cc854d532665837eaff42d 679 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 5 673 0.0 T 11-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 ABE28_011375 2462a6b367cc854d532665837eaff42d 679 SUPERFAMILY SSF81665 31 296 3.4E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABE28_016200 9563c52bf0584e8866236a67bdbb17e2 93 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 83 1.4E-32 T 11-10-2018 IPR003849 Preprotein translocase YajC ABE28_016200 9563c52bf0584e8866236a67bdbb17e2 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 3 23 8.0E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC ABE28_016200 9563c52bf0584e8866236a67bdbb17e2 93 PRINTS PR01853 Bacterial YajC preprotein translocase signature 23 41 8.0E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC ABE28_016200 9563c52bf0584e8866236a67bdbb17e2 93 SMART SM01323 1 83 2.3E-41 T 11-10-2018 IPR003849 Preprotein translocase YajC ABE28_016200 9563c52bf0584e8866236a67bdbb17e2 93 Pfam PF02699 Preprotein translocase subunit 5 80 1.2E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC ABE28_004765 ca4a2c9c62d81de0f0f3333320c71abd 386 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 16 183 1.8E-30 T 11-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 ABE28_004765 ca4a2c9c62d81de0f0f3333320c71abd 386 Gene3D G3DSA:3.40.50.2000 184 345 3.2E-16 T 11-10-2018 ABE28_004765 ca4a2c9c62d81de0f0f3333320c71abd 386 SUPERFAMILY SSF53756 58 305 1.32E-26 T 11-10-2018 ABE28_001395 8fd13ad78d716e7861ab9c1f5a25db4b 116 Gene3D G3DSA:2.30.30.110 1 116 1.9E-52 T 11-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor ABE28_001395 8fd13ad78d716e7861ab9c1f5a25db4b 116 PIRSF PIRSF033490 1 113 8.7E-38 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 ABE28_001395 8fd13ad78d716e7861ab9c1f5a25db4b 116 SUPERFAMILY SSF50118 2 113 2.94E-41 T 11-10-2018 ABE28_001395 8fd13ad78d716e7861ab9c1f5a25db4b 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 7.9E-33 T 11-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 ABE28_012615 6d149ed6eaf651b140eb3671483a797c 411 Gene3D G3DSA:1.20.1250.20 1 396 3.2E-31 T 11-10-2018 ABE28_012615 6d149ed6eaf651b140eb3671483a797c 411 SUPERFAMILY SSF103473 4 397 9.29E-36 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_012615 6d149ed6eaf651b140eb3671483a797c 411 Pfam PF05977 Transmembrane secretion effector 2 402 2.4E-10 T 11-10-2018 IPR010290 Transmembrane secretion effector ABE28_000395 d6331a808fed638aa9e1e8dbba9bf9d2 70 SMART SM00530 9 64 1.3E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_000395 d6331a808fed638aa9e1e8dbba9bf9d2 70 Pfam PF01381 Helix-turn-helix 10 64 2.9E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_000395 d6331a808fed638aa9e1e8dbba9bf9d2 70 Gene3D G3DSA:1.10.260.40 3 70 3.8E-17 T 11-10-2018 ABE28_000395 d6331a808fed638aa9e1e8dbba9bf9d2 70 SUPERFAMILY SSF47413 5 68 7.17E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Gene3D G3DSA:3.10.20.30 3 66 2.1E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 SUPERFAMILY SSF81271 6 65 3.49E-14 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Gene3D G3DSA:3.30.980.10 73 225 7.1E-62 T 11-10-2018 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 630 1.4E-235 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 636 34.897 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Gene3D G3DSA:3.40.50.800 534 639 2.1E-32 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 531 8.0E-38 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Pfam PF02824 TGS domain 7 65 2.0E-11 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Pfam PF03129 Anticodon binding domain 543 630 1.4E-21 T 11-10-2018 IPR004154 Anticodon-binding ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 174 222 2.2E-15 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 SUPERFAMILY SSF52954 531 636 3.93E-29 T 11-10-2018 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Gene3D G3DSA:3.30.54.20 134 190 7.1E-62 T 11-10-2018 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 SUPERFAMILY SSF55681 246 528 2.28E-92 T 11-10-2018 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 SUPERFAMILY SSF55186 67 244 8.5E-62 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 536 548 2.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 466 494 2.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 332 360 2.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 365 388 2.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 PRINTS PR01047 Threonyl-tRNA synthetase signature 509 522 2.9E-53 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 Gene3D G3DSA:3.30.930.10 226 533 3.4E-129 T 11-10-2018 ABE28_018420 1a59b7f9cd8a9131b0eea18c3a50db90 639 SMART SM00863 173 222 3.9E-23 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_006625 114d4c7d159d6f3a0ed41c08b780a835 62 Pfam PF13076 Fur-regulated basic protein A 11 46 1.1E-9 T 11-10-2018 IPR025072 Fur-regulated basic protein A ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 Gene3D G3DSA:1.10.240.10 183 293 3.7E-135 T 11-10-2018 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 Gene3D G3DSA:3.40.50.620 4 323 3.7E-135 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 41.557 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 SUPERFAMILY SSF52374 2 324 4.64E-98 T 11-10-2018 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 2.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 2.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 2.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 2.9E-29 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 6.8E-118 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 ABE28_006115 7c6b5393f1539110e65c2172c1ae05a5 328 Pfam PF00579 tRNA synthetases class I (W and Y) 3 276 6.8E-83 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_004860 144791edbfe5b1c650088dbbebd61d11 175 Pfam PF03358 NADPH-dependent FMN reductase 1 135 2.1E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_004860 144791edbfe5b1c650088dbbebd61d11 175 Gene3D G3DSA:3.40.50.360 1 172 1.9E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_004860 144791edbfe5b1c650088dbbebd61d11 175 SUPERFAMILY SSF52218 1 165 3.87E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 SUPERFAMILY SSF47203 262 478 3.24E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 6 270 5.2E-90 T 11-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 SUPERFAMILY SSF56645 4 271 8.9E-73 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 279 476 1.2E-63 T 11-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 Gene3D G3DSA:1.20.140.10 274 479 3.5E-75 T 11-10-2018 ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 PIRSF PIRSF000331 1 480 7.8E-147 T 11-10-2018 IPR004925 HpaB/PvcC/4-BUDH ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 Gene3D G3DSA:1.10.3140.10 3 146 1.5E-43 T 11-10-2018 ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 4 477 2.8E-170 T 11-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 ABE28_020060 c8a8bf2f114d2cd67c58aa5d61ea3194 482 Gene3D G3DSA:2.40.110.10 147 272 5.0E-42 T 11-10-2018 ABE28_021770 f17c6b088cf7a1e85b80d500e7c945ea 222 SUPERFAMILY SSF161098 12 209 3.53E-46 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_021770 f17c6b088cf7a1e85b80d500e7c945ea 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 44 221 1.4E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_021770 f17c6b088cf7a1e85b80d500e7c945ea 222 Gene3D G3DSA:1.10.3720.10 10 222 1.2E-47 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017085 743a64c08a19432238441645ec359bb4 459 Pfam PF00206 Lyase 8 302 4.8E-75 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ABE28_017085 743a64c08a19432238441645ec359bb4 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 5 455 5.3E-207 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017085 743a64c08a19432238441645ec359bb4 459 Gene3D G3DSA:1.20.200.10 121 448 2.2E-194 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 SUPERFAMILY SSF48557 5 457 5.18E-152 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_017085 743a64c08a19432238441645ec359bb4 459 Pfam PF14698 Argininosuccinate lyase C-terminal 365 432 2.5E-24 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017085 743a64c08a19432238441645ec359bb4 459 Gene3D G3DSA:1.10.275.10 27 231 2.2E-194 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00149 Fumarate lyase superfamily signature 277 293 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00149 Fumarate lyase superfamily signature 149 167 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00149 Fumarate lyase superfamily signature 104 122 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00149 Fumarate lyase superfamily signature 233 260 2.4E-28 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 233 257 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 144 164 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 312 331 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 103 125 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 277 293 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 PRINTS PR00145 Argininosuccinate lyase family signature 195 211 4.6E-68 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 Gene3D G3DSA:1.10.40.30 362 434 2.2E-194 T 11-10-2018 ABE28_017085 743a64c08a19432238441645ec359bb4 459 ProSitePatterns PS00163 Fumarate lyases signature. 277 286 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABE28_017085 743a64c08a19432238441645ec359bb4 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 455 44.701 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_023555 9a14a577533b85d370997b0f32761084 328 SUPERFAMILY SSF47413 2 59 1.88E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_023555 9a14a577533b85d370997b0f32761084 328 Pfam PF13377 Periplasmic binding protein-like domain 165 321 4.5E-33 T 11-10-2018 ABE28_023555 9a14a577533b85d370997b0f32761084 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.4E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_023555 9a14a577533b85d370997b0f32761084 328 Gene3D G3DSA:3.40.50.2300 59 147 2.8E-24 T 11-10-2018 ABE28_023555 9a14a577533b85d370997b0f32761084 328 Gene3D G3DSA:3.40.50.2300 148 324 2.1E-45 T 11-10-2018 ABE28_023555 9a14a577533b85d370997b0f32761084 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ABE28_023555 9a14a577533b85d370997b0f32761084 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.6E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_023555 9a14a577533b85d370997b0f32761084 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.6E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_023555 9a14a577533b85d370997b0f32761084 328 SUPERFAMILY SSF53822 60 322 3.93E-70 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_023555 9a14a577533b85d370997b0f32761084 328 Gene3D G3DSA:1.10.260.40 3 58 6.7E-23 T 11-10-2018 ABE28_023555 9a14a577533b85d370997b0f32761084 328 SMART SM00354 1 71 2.1E-35 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 514 1.7E-251 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 Gene3D G3DSA:3.40.605.10 10 504 3.1E-189 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 69.539 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 Gene3D G3DSA:3.40.309.10 290 480 3.1E-189 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 SUPERFAMILY SSF53720 4 511 4.06E-156 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_017990 6e35acb9ac046993b2190fe26f47de26 515 Pfam PF00171 Aldehyde dehydrogenase family 50 509 2.1E-154 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 SMART SM00490 493 574 6.8E-21 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 SMART SM00487 253 442 3.4E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 SUPERFAMILY SSF52540 369 631 1.85E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 27 649 7.3E-247 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Gene3D G3DSA:3.40.50.300 199 434 3.7E-89 T 11-10-2018 ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Pfam PF00270 DEAD/DEAH box helicase 258 415 3.3E-18 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 SUPERFAMILY SSF52540 173 436 2.8E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Gene3D G3DSA:2.40.50.140 45 138 1.8E-10 T 11-10-2018 ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Pfam PF00271 Helicase conserved C-terminal domain 453 573 1.4E-19 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 SUPERFAMILY SSF50249 7 168 2.57E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Pfam PF17191 RecG wedge domain 9 163 2.5E-16 T 11-10-2018 IPR033454 RecG, wedge domain ABE28_007770 0cda0a37682866ac8e86689d7264132e 683 Gene3D G3DSA:3.40.50.300 441 614 1.2E-54 T 11-10-2018 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Pfam PF03572 Peptidase family S41 228 390 1.3E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Pfam PF01471 Putative peptidoglycan binding domain 413 464 6.4E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Gene3D G3DSA:1.10.101.10 401 478 2.3E-15 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Pfam PF13180 PDZ domain 130 206 6.2E-16 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Gene3D G3DSA:3.90.226.10 217 388 1.2E-95 T 11-10-2018 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Gene3D G3DSA:3.30.750.44 77 366 1.2E-95 T 11-10-2018 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 Gene3D G3DSA:2.30.42.10 129 216 1.2E-95 T 11-10-2018 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 SMART SM00228 129 200 4.8E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 SMART SM00245 202 391 1.3E-67 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 SUPERFAMILY SSF47090 401 472 1.57E-15 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 SUPERFAMILY SSF52096 75 395 4.14E-74 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 82 400 1.2E-119 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ABE28_013175 cd299288d4663582b89be4f4c2a7e861 495 SUPERFAMILY SSF50156 120 212 3.76E-20 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_017065 a39cb2a82c0d0a31d3666e40767921b5 226 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 226 37.701 T 11-10-2018 IPR022877 Protein of unknown funcion UPF0173 ABE28_017065 a39cb2a82c0d0a31d3666e40767921b5 226 Gene3D G3DSA:3.60.15.10 1 226 3.1E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017065 a39cb2a82c0d0a31d3666e40767921b5 226 SMART SM00849 7 192 7.5E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_017065 a39cb2a82c0d0a31d3666e40767921b5 226 Pfam PF13483 Beta-lactamase superfamily domain 2 192 7.1E-24 T 11-10-2018 ABE28_017065 a39cb2a82c0d0a31d3666e40767921b5 226 SUPERFAMILY SSF56281 1 224 5.24E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 SMART SM00100 19 136 4.8E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 Pfam PF00027 Cyclic nucleotide-binding domain 35 116 3.8E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 Pfam PF13545 Crp-like helix-turn-helix domain 154 224 1.1E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 SUPERFAMILY SSF46785 151 226 4.68E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 SUPERFAMILY SSF51206 19 137 2.75E-22 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 Gene3D G3DSA:1.10.10.10 148 225 9.8E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009620 bda4dff0d12229813bf4e3c56d3157d0 232 Gene3D G3DSA:2.60.120.10 14 145 2.0E-19 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 3.8E-42 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 SUPERFAMILY SSF55282 3 178 1.98E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 PIRSF PIRSF002161 1 179 6.9E-71 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 Pfam PF00281 Ribosomal protein L5 24 80 7.5E-29 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 Gene3D G3DSA:3.30.1440.10 1 179 1.2E-83 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000645 24a9d6dcd5a915cae88b5b6b5befc0fa 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.452 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_020230 d4fa8bc064c2f291858e7e19e77625af 229 SUPERFAMILY SSF52833 42 223 7.68E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_020230 d4fa8bc064c2f291858e7e19e77625af 229 Gene3D G3DSA:3.40.30.10 34 228 1.6E-46 T 11-10-2018 ABE28_020230 d4fa8bc064c2f291858e7e19e77625af 229 Pfam PF13462 Thioredoxin 49 224 6.4E-34 T 11-10-2018 IPR012336 Thioredoxin-like fold ABE28_012030 6066ad4b9effe8a009611d46beee4bba 176 SUPERFAMILY SSF52141 4 162 3.6E-38 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_012030 6066ad4b9effe8a009611d46beee4bba 176 Gene3D G3DSA:3.40.470.10 4 169 8.2E-63 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_012030 6066ad4b9effe8a009611d46beee4bba 176 Pfam PF03167 Uracil DNA glycosylase superfamily 8 150 3.2E-20 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 Gene3D G3DSA:3.40.50.720 1 234 2.2E-70 T 11-10-2018 ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 SUPERFAMILY SSF51735 6 220 1.54E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_023870 72d631ebf55a048cdd26b2cf983c4908 235 Pfam PF00106 short chain dehydrogenase 6 198 4.9E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Gene3D G3DSA:3.40.50.80 103 215 1.9E-26 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 PIRSF PIRSF006816 1 259 1.1E-70 T 11-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 SUPERFAMILY SSF63380 2 100 1.42E-20 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Gene3D G3DSA:2.40.30.10 2 98 2.7E-28 T 11-10-2018 ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 4 259 37.705 T 11-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Pfam PF00175 Oxidoreductase NAD-binding domain 113 202 1.2E-5 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 SUPERFAMILY SSF52343 95 258 3.27E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 216 257 2.8E-17 T 11-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain ABE28_007635 59943f9dcc47186f89b70fab7cb3a2b5 259 Gene3D G3DSA:2.10.240.10 216 259 3.2E-18 T 11-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 ProSitePatterns PS00321 recA signature. 212 220 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 SUPERFAMILY SSF52540 3 266 4.0E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 Hamap MF_00268 Protein RecA [recA]. 4 328 53.293 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 92 121 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 242 271 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 209 237 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 296 313 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 164 193 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 PRINTS PR00142 RecA protein signature 126 155 1.2E-84 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 6.1E-176 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 Gene3D G3DSA:3.30.250.10 267 342 1.7E-27 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 Gene3D G3DSA:3.40.50.300 25 266 3.6E-83 T 11-10-2018 ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 SMART SM00382 56 227 5.5E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 SUPERFAMILY SSF54752 267 325 8.11E-21 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal ABE28_008330 9e83e0f4c82f1ffbe560e5e8999b96e7 347 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.3E-147 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 ABE28_005120 9d88d296a136fb1a361b753025139b65 258 SUPERFAMILY SSF52096 5 257 5.97E-84 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005120 9d88d296a136fb1a361b753025139b65 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 257 1.3E-73 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_005120 9d88d296a136fb1a361b753025139b65 258 Gene3D G3DSA:3.90.226.10 2 200 2.2E-73 T 11-10-2018 ABE28_005120 9d88d296a136fb1a361b753025139b65 258 Gene3D G3DSA:1.10.12.10 201 257 2.7E-27 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_022205 260a8ba110504f8bb137f0a740406602 500 Gene3D G3DSA:1.25.40.10 7 136 1.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 Gene3D G3DSA:1.25.40.10 143 326 1.1E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SUPERFAMILY SSF48452 157 321 9.49E-23 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SUPERFAMILY SSF48452 22 118 2.21E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SMART SM00028 186 219 5.9E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SMART SM00028 89 122 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SMART SM00028 152 185 41.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 SMART SM00028 20 53 1.1 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022205 260a8ba110504f8bb137f0a740406602 500 Pfam PF13432 Tetratricopeptide repeat 158 219 5.0E-8 T 11-10-2018 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Pfam PF00672 HAMP domain 306 345 1.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Gene3D G3DSA:1.10.287.950 404 662 1.2E-57 T 11-10-2018 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Pfam PF02743 Cache domain 51 268 1.1E-43 T 11-10-2018 IPR033479 Double Cache domain 1 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Gene3D G3DSA:1.20.1480.50 278 363 2.3E-14 T 11-10-2018 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 SUPERFAMILY SSF58104 326 661 2.62E-65 T 11-10-2018 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Gene3D G3DSA:3.30.450.20 186 276 3.0E-44 T 11-10-2018 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 SUPERFAMILY SSF103190 123 196 3.73E-13 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 SMART SM00283 387 655 1.9E-50 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 464 615 4.1E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 SMART SM00304 306 358 3.1E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_002475 5da2017b12e0715c9a1327bdedd5e373 663 Gene3D G3DSA:3.30.450.20 82 185 3.0E-44 T 11-10-2018 ABE28_008640 8fef155aaf28e18c8cca39cd4c68c922 341 Gene3D G3DSA:3.40.50.880 48 316 4.0E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_008640 8fef155aaf28e18c8cca39cd4c68c922 341 SUPERFAMILY SSF52317 75 266 6.11E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_008640 8fef155aaf28e18c8cca39cd4c68c922 341 PIRSF PIRSF032067 9 339 4.7E-53 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 ABE28_008640 8fef155aaf28e18c8cca39cd4c68c922 341 Pfam PF03575 Peptidase family S51 99 261 7.5E-11 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_017195 013e684e8731fa5bd38943a9df78ec8f 334 Gene3D G3DSA:3.40.190.10 44 331 3.4E-109 T 11-10-2018 ABE28_017195 013e684e8731fa5bd38943a9df78ec8f 334 Pfam PF09084 NMT1/THI5 like 49 262 6.3E-77 T 11-10-2018 IPR015168 SsuA/THI5-like ABE28_017195 013e684e8731fa5bd38943a9df78ec8f 334 Gene3D G3DSA:3.40.190.10 120 222 3.4E-109 T 11-10-2018 ABE28_017195 013e684e8731fa5bd38943a9df78ec8f 334 SUPERFAMILY SSF53850 43 321 1.06E-49 T 11-10-2018 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 Gene3D G3DSA:3.30.160.70 5 70 1.3E-12 T 11-10-2018 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 SUPERFAMILY SSF46767 75 155 4.32E-27 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 77 155 1.1E-27 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 Gene3D G3DSA:1.10.10.10 74 158 2.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 1.8E-32 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 8 155 37.77 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_017655 9979d6ed335b8ff448a887e9cfc782bc 161 SUPERFAMILY SSF53155 4 79 2.16E-17 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 Gene3D G3DSA:2.40.30.10 133 209 4.9E-16 T 11-10-2018 ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 1.3E-85 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 Pfam PF00297 Ribosomal protein L3 97 180 4.7E-15 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 38.949 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 SUPERFAMILY SSF50447 1 207 2.03E-80 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000585 f07d6aa553cfbdac43b60a322a962770 209 Gene3D G3DSA:2.40.50.620 32 95 8.4E-17 T 11-10-2018 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 SUPERFAMILY SSF54919 1 148 1.31E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 SMART SM00562 1 138 1.0E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.165 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 1.3E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 Gene3D G3DSA:3.30.70.141 1 148 1.1E-63 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_014265 a6a7bc773bdfa1a61c33d653ed0940be 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 5.5E-51 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_011695 e6794d22819423b6af0313a2b0db0498 333 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 13 329 7.5E-78 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family ABE28_011695 e6794d22819423b6af0313a2b0db0498 333 Gene3D G3DSA:3.40.190.10 54 329 3.3E-78 T 11-10-2018 ABE28_011695 e6794d22819423b6af0313a2b0db0498 333 Pfam PF16868 NMT1-like family 54 329 4.3E-67 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family ABE28_011695 e6794d22819423b6af0313a2b0db0498 333 SUPERFAMILY SSF53850 51 330 8.49E-59 T 11-10-2018 ABE28_011695 e6794d22819423b6af0313a2b0db0498 333 Gene3D G3DSA:3.40.190.10 129 266 3.3E-78 T 11-10-2018 ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 SMART SM00382 26 213 1.8E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 Gene3D G3DSA:3.40.50.300 1 240 7.7E-80 T 11-10-2018 ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 SUPERFAMILY SSF52540 1 235 2.41E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 PIRSF PIRSF039085 1 240 1.9E-114 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_014820 1ffb202c6fde5c11e0f25fba397dad76 240 Pfam PF00005 ABC transporter 17 165 4.7E-38 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 41.294 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Gene3D G3DSA:3.90.960.10 240 386 4.9E-256 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Gene3D G3DSA:3.40.50.800 4 549 4.9E-256 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 SUPERFAMILY SSF55681 9 475 1.83E-103 T 11-10-2018 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 455 5.8E-58 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Pfam PF04073 Aminoacyl-tRNA editing domain 257 373 2.7E-27 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Pfam PF03129 Anticodon binding domain 472 563 3.3E-18 T 11-10-2018 IPR004154 Anticodon-binding ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 SUPERFAMILY SSF52954 460 565 3.62E-29 T 11-10-2018 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 563 9.9E-248 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 6.3E-17 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 PIRSF PIRSF001535 1 566 1.5E-265 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 Gene3D G3DSA:3.30.930.10 11 462 4.9E-256 T 11-10-2018 ABE28_008135 319843bd661e6f5d54cf126e07f9849f 566 SUPERFAMILY SSF55826 218 386 1.26E-31 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_018275 e0a9ff4769569f560d1ef329e02d6417 208 Gene3D G3DSA:3.50.30.50 1 207 6.1E-70 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 ABE28_018275 e0a9ff4769569f560d1ef329e02d6417 208 Hamap MF_01969 Kynurenine formamidase [kynB]. 3 207 41.102 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 ABE28_018275 e0a9ff4769569f560d1ef329e02d6417 208 SUPERFAMILY SSF102198 2 205 1.44E-55 T 11-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 ABE28_018275 e0a9ff4769569f560d1ef329e02d6417 208 Pfam PF04199 Putative cyclase 5 150 2.0E-17 T 11-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 ABE28_018275 e0a9ff4769569f560d1ef329e02d6417 208 TIGRFAM TIGR03035 trp_arylform: arylformamidase 3 207 6.1E-82 T 11-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 SMART SM00642 13 415 1.1E-148 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 Gene3D G3DSA:3.90.400.10 110 170 2.4E-33 T 11-10-2018 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 SUPERFAMILY SSF51011 476 548 1.16E-12 T 11-10-2018 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 Gene3D G3DSA:2.60.40.1180 477 549 1.1E-15 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 Gene3D G3DSA:3.20.20.80 1 109 1.2E-49 T 11-10-2018 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 Gene3D G3DSA:3.20.20.80 171 476 3.2E-124 T 11-10-2018 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 SUPERFAMILY SSF51445 4 473 1.16E-155 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 PRINTS PR00110 Alpha-amylase signature 193 204 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 PRINTS PR00110 Alpha-amylase signature 316 328 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 PRINTS PR00110 Alpha-amylase signature 92 103 4.1E-5 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 ABE28_005945 8014b1ec44de345493d8257f684ceaea 549 Pfam PF00128 Alpha amylase, catalytic domain 28 373 8.5E-116 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 6 211 7.0E-59 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 PIRSF PIRSF003107 1 217 1.2E-59 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 Gene3D G3DSA:1.20.58.220 3 216 7.2E-70 T 11-10-2018 IPR038078 PhoU-like domain superfamily ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 SUPERFAMILY SSF109755 4 213 1.26E-61 T 11-10-2018 ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 Pfam PF01895 PhoU domain 20 105 4.2E-19 T 11-10-2018 IPR026022 PhoU domain ABE28_015230 0ac2797b041f61cf8889ca8cc175b734 217 Pfam PF01895 PhoU domain 121 203 1.2E-20 T 11-10-2018 IPR026022 PhoU domain ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 1.1E-16 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Gene3D G3DSA:3.30.1370.10 550 621 2.1E-21 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF55666 145 236 4.19E-30 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SMART SM00316 620 690 2.7E-23 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 693 30.998 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF54211 5 144 5.06E-50 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF01138 3' exoribonuclease family, domain 1 323 456 1.5E-16 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 9.7E-21 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF55666 450 548 8.25E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF54791 555 640 5.31E-24 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Gene3D G3DSA:3.30.230.70 235 549 2.2E-118 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Gene3D G3DSA:3.30.230.70 1 230 4.6E-85 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SMART SM00322 552 617 6.5E-13 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 1.2E-16 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF03725 3' exoribonuclease family, domain 2 459 527 4.5E-6 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 PIRSF PIRSF005499 2 705 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF50249 621 698 6.34E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 SUPERFAMILY SSF54211 291 488 1.87E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF00013 KH domain 556 614 8.4E-11 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Pfam PF00575 S1 RNA binding domain 621 690 2.4E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 Gene3D G3DSA:2.40.50.140 622 693 2.0E-25 T 11-10-2018 ABE28_008195 e257962be53d546fbc3eee2b511a872d 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 692 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 ABE28_011555 9f5697ccc97b00552db756c3a2207a5a 92 SMART SM00858 5 81 5.6E-10 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_011555 9f5697ccc97b00552db756c3a2207a5a 92 Gene3D G3DSA:3.90.1210.30 1 82 6.9E-28 T 11-10-2018 ABE28_011555 9f5697ccc97b00552db756c3a2207a5a 92 Pfam PF08666 SAF domain 5 81 1.2E-13 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_007715 b0d542df1e401ea45b131132bdac391e 249 SMART SM00331 7 242 2.5E-52 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_007715 b0d542df1e401ea45b131132bdac391e 249 Pfam PF13672 Protein phosphatase 2C 11 202 5.0E-15 T 11-10-2018 ABE28_007715 b0d542df1e401ea45b131132bdac391e 249 SUPERFAMILY SSF81606 2 242 4.45E-65 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_007715 b0d542df1e401ea45b131132bdac391e 249 Gene3D G3DSA:3.60.40.10 1 246 4.8E-72 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_007715 b0d542df1e401ea45b131132bdac391e 249 SMART SM00332 1 240 1.4E-26 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_016910 68c6e6127a5974d0fc3cb02ca1050f62 199 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 190 8.1E-62 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABE28_016910 68c6e6127a5974d0fc3cb02ca1050f62 199 SUPERFAMILY SSF52540 1 194 1.12E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016910 68c6e6127a5974d0fc3cb02ca1050f62 199 Gene3D G3DSA:3.40.50.300 2 198 1.6E-75 T 11-10-2018 ABE28_016910 68c6e6127a5974d0fc3cb02ca1050f62 199 Pfam PF01121 Dephospho-CoA kinase 4 183 2.9E-60 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABE28_016910 68c6e6127a5974d0fc3cb02ca1050f62 199 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 27.563 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 SUPERFAMILY SSF81665 143 688 5.1E-20 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 394 408 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 618 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 243 257 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 523 534 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 546 556 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 635 4.5E-22 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Pfam PF00122 E1-E2 ATPase 195 374 7.2E-52 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 396 402 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Gene3D G3DSA:2.70.150.20 186 298 6.4E-33 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 SUPERFAMILY SSF55008 7 59 2.88E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Gene3D G3DSA:3.40.50.1000 375 652 1.0E-84 T 11-10-2018 IPR023214 HAD superfamily ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 143 702 1.0E-185 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Pfam PF00702 haloacid dehalogenase-like hydrolase 391 611 7.4E-46 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 166 683 4.1E-87 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 SUPERFAMILY SSF81653 196 293 1.96E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Gene3D G3DSA:3.30.70.100 5 73 4.8E-16 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Gene3D G3DSA:3.40.1110.10 405 530 1.0E-84 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 SUPERFAMILY SSF56784 393 700 1.6E-56 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 144 521 3.0E-100 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 259 275 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 20 41 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 42 65 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 124 136 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 178 198 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 278 292 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 107 124 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 PRINTS PR00941 Cadmium-transporting ATPase signature 198 214 3.7E-67 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 125 702 2.6E-119 T 11-10-2018 ABE28_000980 ed649f72a73a1d2fa16831f21ad13673 707 Pfam PF00403 Heavy-metal-associated domain 8 58 9.1E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABE28_012590 760e52f6091a3a87ffb3f3aa0a94dab7 277 Gene3D G3DSA:3.90.25.10 162 239 1.9E-47 T 11-10-2018 ABE28_012590 760e52f6091a3a87ffb3f3aa0a94dab7 277 Gene3D G3DSA:3.40.50.720 4 214 1.9E-47 T 11-10-2018 ABE28_012590 760e52f6091a3a87ffb3f3aa0a94dab7 277 SUPERFAMILY SSF51735 1 268 1.62E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012590 760e52f6091a3a87ffb3f3aa0a94dab7 277 Pfam PF04321 RmlD substrate binding domain 1 241 9.5E-31 T 11-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 ABE28_021825 9fb7b1469a8c72c71d1debcbca4c1858 305 PIRSF PIRSF000196 1 305 6.4E-126 T 11-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 ABE28_021825 9fb7b1469a8c72c71d1debcbca4c1858 305 SUPERFAMILY SSF51730 37 300 3.02E-71 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like ABE28_021825 9fb7b1469a8c72c71d1debcbca4c1858 305 Gene3D G3DSA:3.20.20.530 18 305 5.2E-94 T 11-10-2018 ABE28_021825 9fb7b1469a8c72c71d1debcbca4c1858 305 Pfam PF01619 Proline dehydrogenase 45 297 8.9E-33 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 Gene3D G3DSA:3.40.640.10 1 250 2.9E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 381 1.6E-144 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 SUPERFAMILY SSF53383 24 382 1.79E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 PIRSF PIRSF001434 1 385 6.2E-141 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005510 3d6d407704ef67e68b99bdb71f315f07 393 Gene3D G3DSA:3.90.1150.10 251 387 5.2E-45 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 PRINTS PR00757 Flavin-containing amine oxidase signature 329 348 1.7E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 PRINTS PR00757 Flavin-containing amine oxidase signature 29 48 1.7E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 PRINTS PR00757 Flavin-containing amine oxidase signature 435 457 1.7E-8 T 11-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 Gene3D G3DSA:1.10.10.1620 440 488 8.4E-18 T 11-10-2018 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 Gene3D G3DSA:3.50.50.60 29 433 1.7E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 Gene3D G3DSA:3.90.660.10 27 423 1.7E-97 T 11-10-2018 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 Pfam PF01593 Flavin containing amine oxidoreductase 37 483 1.1E-65 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 Gene3D G3DSA:1.10.405.10 125 234 1.7E-97 T 11-10-2018 ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 SUPERFAMILY SSF51905 26 484 2.33E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010950 be8bfcf96e27ac3674fe8066100a1136 492 SUPERFAMILY SSF54373 325 434 6.48E-30 T 11-10-2018 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 SMART SM01350 178 468 1.7E-229 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 Gene3D G3DSA:3.40.50.720 1 179 7.8E-58 T 11-10-2018 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 2.7E-88 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 469 2.0E-229 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 SUPERFAMILY SSF51735 4 176 7.89E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 173 8.4E-53 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 Gene3D G3DSA:1.20.5.320 436 469 2.4E-22 T 11-10-2018 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 SUPERFAMILY SSF48179 176 469 3.61E-133 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 Gene3D G3DSA:1.10.1040.10 180 435 9.7E-111 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 PIRSF PIRSF000109 1 470 1.2E-242 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_014785 1abb8570844cd02cd4d75f0790f04870 470 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 1.6E-136 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 ABE28_003805 e26908aeaf466f9d4ec5524892ad6600 262 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 231 2.4E-22 T 11-10-2018 ABE28_003805 e26908aeaf466f9d4ec5524892ad6600 262 Gene3D G3DSA:1.20.120.710 15 130 1.5E-48 T 11-10-2018 ABE28_003805 e26908aeaf466f9d4ec5524892ad6600 262 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 138 225 2.0E-13 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_003805 e26908aeaf466f9d4ec5524892ad6600 262 Gene3D G3DSA:3.40.50.1000 3 253 1.5E-48 T 11-10-2018 IPR023214 HAD superfamily ABE28_003805 e26908aeaf466f9d4ec5524892ad6600 262 SUPERFAMILY SSF56784 2 257 2.49E-40 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_017870 fa6219450f1bf50e25e74641c9a35bbe 160 SUPERFAMILY SSF55961 14 154 2.24E-33 T 11-10-2018 ABE28_017870 fa6219450f1bf50e25e74641c9a35bbe 160 Gene3D G3DSA:3.30.530.20 1 159 4.5E-41 T 11-10-2018 IPR023393 START-like domain superfamily ABE28_017870 fa6219450f1bf50e25e74641c9a35bbe 160 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 22 133 8.2E-13 T 11-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 11 266 32.298 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 118 132 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 87 104 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 61 69 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 17 24 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 162 179 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 30 51 4.9E-36 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 Gene3D G3DSA:3.40.1190.20 1 269 6.0E-96 T 11-10-2018 IPR029056 Ribokinase-like ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 PIRSF PIRSF000513 4 268 6.3E-90 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 SUPERFAMILY SSF53613 7 265 6.86E-55 T 11-10-2018 IPR029056 Ribokinase-like ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 257 6.7E-85 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006605 8bcc71785b9de189f39d52cc5f7d997f 271 Pfam PF02110 Hydroxyethylthiazole kinase family 10 257 9.4E-80 T 11-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_003725 1c0afdef0b46a76e7ef4d41c816d4900 226 Gene3D G3DSA:2.160.10.10 18 211 1.6E-51 T 11-10-2018 ABE28_003725 1c0afdef0b46a76e7ef4d41c816d4900 226 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 116 144 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABE28_003725 1c0afdef0b46a76e7ef4d41c816d4900 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 107 140 8.4E-6 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_003725 1c0afdef0b46a76e7ef4d41c816d4900 226 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 38 70 7.1E-4 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_003725 1c0afdef0b46a76e7ef4d41c816d4900 226 SUPERFAMILY SSF51161 24 172 1.05E-31 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_017245 530421ae16c23f28735caaafa78d3b17 267 SUPERFAMILY SSF89550 1 258 1.27E-38 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_017245 530421ae16c23f28735caaafa78d3b17 267 Pfam PF02811 PHP domain 4 170 6.7E-13 T 11-10-2018 IPR004013 PHP domain GO:0003824 ABE28_017245 530421ae16c23f28735caaafa78d3b17 267 Gene3D G3DSA:3.20.20.140 1 265 5.4E-67 T 11-10-2018 ABE28_017245 530421ae16c23f28735caaafa78d3b17 267 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 261 2.5E-67 T 11-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 ABE28_017245 530421ae16c23f28735caaafa78d3b17 267 Pfam PF13263 PHP-associated 231 260 1.3E-5 T 11-10-2018 ABE28_004400 373d33d3e6ceee59e175f51fba001d57 173 SUPERFAMILY SSF51182 4 168 2.61E-59 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_004400 373d33d3e6ceee59e175f51fba001d57 173 Gene3D G3DSA:2.60.120.10 1 168 4.1E-62 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_004400 373d33d3e6ceee59e175f51fba001d57 173 Pfam PF06172 Cupin superfamily (DUF985) 7 146 2.4E-46 T 11-10-2018 IPR009327 Cupin domain of unknown function DUF985 ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SMART SM00257 3 46 3.4E-8 T 11-10-2018 IPR018392 LysM domain ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SMART SM00257 54 98 5.1E-10 T 11-10-2018 IPR018392 LysM domain ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Gene3D G3DSA:3.10.350.10 2 46 5.4E-10 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SUPERFAMILY SSF51445 116 413 2.22E-33 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Gene3D G3DSA:3.10.350.10 52 98 2.0E-12 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Pfam PF01476 LysM domain 5 46 3.6E-9 T 11-10-2018 IPR018392 LysM domain ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Pfam PF01476 LysM domain 55 98 1.6E-8 T 11-10-2018 IPR018392 LysM domain ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SUPERFAMILY SSF54106 53 98 6.15E-7 T 11-10-2018 ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Pfam PF00704 Glycosyl hydrolases family 18 187 402 1.2E-21 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SUPERFAMILY SSF54106 2 46 7.32E-8 T 11-10-2018 ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Gene3D G3DSA:3.20.20.80 130 410 7.8E-77 T 11-10-2018 ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 Gene3D G3DSA:3.10.50.10 321 375 7.8E-77 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily ABE28_012620 da6dd537bfac21489bf3eab3a25195dc 420 SMART SM00636 105 404 1.8E-7 T 11-10-2018 IPR011583 Chitinase II GO:0008061 ABE28_000335 378a81806b0a3d98d63a577283e10dc2 245 SUPERFAMILY SSF53300 4 78 5.49E-10 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABE28_000335 378a81806b0a3d98d63a577283e10dc2 245 SUPERFAMILY SSF53300 133 225 4.45E-12 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABE28_000335 378a81806b0a3d98d63a577283e10dc2 245 Gene3D G3DSA:3.40.50.410 1 235 3.2E-59 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABE28_000335 378a81806b0a3d98d63a577283e10dc2 245 Pfam PF00092 von Willebrand factor type A domain 4 79 9.2E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A ABE28_000335 378a81806b0a3d98d63a577283e10dc2 245 Pfam PF13519 von Willebrand factor type A domain 135 227 3.1E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A ABE28_019205 13318f3a03ddde97603856318dc22da2 417 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 218 250 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 Gene3D G3DSA:3.40.50.1980 19 221 5.9E-106 T 11-10-2018 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PIRSF PIRSF000099 1 417 4.5E-123 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 416 33.038 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 22 415 2.5E-131 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 Gene3D G3DSA:3.40.50.1980 222 338 5.9E-106 T 11-10-2018 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 Pfam PF00815 Histidinol dehydrogenase 12 416 5.1E-136 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 SUPERFAMILY SSF53720 16 416 7.45E-67 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 309 334 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 22 46 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 159 185 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 96 123 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 218 239 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 350 368 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 189 214 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_019205 13318f3a03ddde97603856318dc22da2 417 PRINTS PR00083 Histidinol dehydrogenase signature 240 259 2.7E-71 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 Gene3D G3DSA:1.10.3810.10 53 251 5.0E-67 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 Pfam PF00912 Transglycosylase 60 235 7.9E-60 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 SUPERFAMILY SSF53955 49 259 2.39E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 SUPERFAMILY SSF56601 217 618 6.54E-91 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 Gene3D G3DSA:3.40.710.10 288 617 1.6E-87 T 11-10-2018 ABE28_021450 d97e612a30d7fe748c1e7919670c50c3 620 Pfam PF00905 Penicillin binding protein transpeptidase domain 346 580 3.6E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_010665 85cfe4431596a10a6d4ee50bd200a132 203 SUPERFAMILY SSF51391 17 196 1.26E-49 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_010665 85cfe4431596a10a6d4ee50bd200a132 203 Gene3D G3DSA:3.20.20.70 4 202 4.0E-58 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_010665 85cfe4431596a10a6d4ee50bd200a132 203 Pfam PF02581 Thiamine monophosphate synthase 16 182 2.0E-43 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_020990 ba7faff612e9fb01f0ac5b26c672bdcc 305 Gene3D G3DSA:3.20.20.530 21 305 5.7E-88 T 11-10-2018 ABE28_020990 ba7faff612e9fb01f0ac5b26c672bdcc 305 PIRSF PIRSF000196 1 305 1.7E-122 T 11-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 ABE28_020990 ba7faff612e9fb01f0ac5b26c672bdcc 305 SUPERFAMILY SSF51730 37 300 7.45E-70 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like ABE28_020990 ba7faff612e9fb01f0ac5b26c672bdcc 305 Pfam PF01619 Proline dehydrogenase 45 297 2.2E-35 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 ABE28_005295 e2eed43bb55eb585622b9d0f71efd3d9 315 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 85 233 1.1E-39 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_005295 e2eed43bb55eb585622b9d0f71efd3d9 315 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 86 233 2.5E-40 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_005295 e2eed43bb55eb585622b9d0f71efd3d9 315 Gene3D G3DSA:1.10.260.150 45 315 2.1E-79 T 11-10-2018 ABE28_008285 b51d765b9f571c28faeb7b003f9592a1 306 Pfam PF02653 Branched-chain amino acid transport system / permease component 2 283 3.9E-42 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_008290 e508275227482a43fcfcddb2f9f917de 426 SUPERFAMILY SSF63411 11 224 1.83E-21 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008290 e508275227482a43fcfcddb2f9f917de 426 Gene3D G3DSA:3.30.830.10 6 230 1.8E-63 T 11-10-2018 ABE28_008290 e508275227482a43fcfcddb2f9f917de 426 Gene3D G3DSA:3.30.830.10 240 423 2.2E-43 T 11-10-2018 ABE28_008290 e508275227482a43fcfcddb2f9f917de 426 SUPERFAMILY SSF63411 246 413 1.53E-30 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008290 e508275227482a43fcfcddb2f9f917de 426 Pfam PF05193 Peptidase M16 inactive domain 185 357 3.1E-29 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ABE28_008400 792ce81cbf0821db7e3737f8ef7ff159 208 Pfam PF06445 GyrI-like small molecule binding domain 18 203 1.1E-22 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain ABE28_008400 792ce81cbf0821db7e3737f8ef7ff159 208 PIRSF PIRSF031644 1 207 2.9E-80 T 11-10-2018 IPR008319 Uncharacterised conserved protein UCP031644 ABE28_008400 792ce81cbf0821db7e3737f8ef7ff159 208 SUPERFAMILY SSF55136 131 197 9.94E-8 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_008400 792ce81cbf0821db7e3737f8ef7ff159 208 Gene3D G3DSA:3.20.80.10 1 205 2.6E-79 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_022190 42d9ff63e4bb3e0d67df318d934dca63 299 SUPERFAMILY SSF52540 10 162 1.15E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022190 42d9ff63e4bb3e0d67df318d934dca63 299 Pfam PF03668 P-loop ATPase protein family 10 291 6.0E-124 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ABE28_022190 42d9ff63e4bb3e0d67df318d934dca63 299 PIRSF PIRSF005052 9 294 1.7E-108 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ABE28_022190 42d9ff63e4bb3e0d67df318d934dca63 299 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 291 42.07 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 ABE28_006255 da3fe392758ec531124fe1df13e949ad 341 PIRSF PIRSF011570 1 339 1.9E-152 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_006255 da3fe392758ec531124fe1df13e949ad 341 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 336 5.8E-152 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_006255 da3fe392758ec531124fe1df13e949ad 341 Gene3D G3DSA:3.40.47.40 1 341 1.3E-144 T 11-10-2018 IPR038369 Stage V sporulation AD superfamily ABE28_006255 da3fe392758ec531124fe1df13e949ad 341 SUPERFAMILY SSF53901 54 290 9.47E-16 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_006255 da3fe392758ec531124fe1df13e949ad 341 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 336 4.7E-148 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_007290 e9152b4928da48a85eeb0055c826cae8 93 Gene3D G3DSA:1.10.287.750 4 92 1.9E-36 T 11-10-2018 IPR036270 UPF0358 superfamily ABE28_007290 e9152b4928da48a85eeb0055c826cae8 93 SUPERFAMILY SSF140404 6 84 1.15E-36 T 11-10-2018 IPR036270 UPF0358 superfamily ABE28_007290 e9152b4928da48a85eeb0055c826cae8 93 Hamap MF_01560 UPF0358 protein . 3 93 27.391 T 11-10-2018 IPR009983 Uncharacterised protein family UPF0358 ABE28_007290 e9152b4928da48a85eeb0055c826cae8 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 90 1.5E-41 T 11-10-2018 IPR009983 Uncharacterised protein family UPF0358 ABE28_018040 35d6977f0d3ebaf75b350db363f57a83 279 Gene3D G3DSA:1.10.3720.10 67 271 9.5E-16 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018040 35d6977f0d3ebaf75b350db363f57a83 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 268 2.8E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_018040 35d6977f0d3ebaf75b350db363f57a83 279 SUPERFAMILY SSF161098 70 257 6.8E-21 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 2.2E-185 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 2.2E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Gene3D G3DSA:3.30.300.10 13 284 4.3E-180 T 11-10-2018 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 2.3E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 58.522 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 PIRSF PIRSF000497 1 397 5.0E-177 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 SUPERFAMILY SSF55973 125 246 1.96E-52 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 SUPERFAMILY SSF55973 5 111 1.18E-46 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 3.7E-50 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Gene3D G3DSA:3.30.300.10 104 389 4.3E-180 T 11-10-2018 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 SUPERFAMILY SSF55973 247 395 4.71E-70 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 ABE28_020655 882f5da9b11ace00e6aaa678b607f13d 397 Gene3D G3DSA:3.30.300.10 7 247 4.3E-180 T 11-10-2018 ABE28_012805 29f01e40dc5c39423304d5bbb315d088 302 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 239 293 2.1E-22 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_012805 29f01e40dc5c39423304d5bbb315d088 302 PIRSF PIRSF006483 11 301 6.0E-97 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_012805 29f01e40dc5c39423304d5bbb315d088 302 Gene3D G3DSA:3.30.70.120 210 286 2.4E-24 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_012805 29f01e40dc5c39423304d5bbb315d088 302 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 32 234 1.8E-66 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 366 378 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 336 342 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 4.2E-32 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 371 381 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 Gene3D G3DSA:1.10.8.870 416 543 1.4E-35 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 SUPERFAMILY SSF51905 10 237 1.91E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 Gene3D G3DSA:3.30.9.10 102 343 8.2E-139 T 11-10-2018 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 Pfam PF01266 FAD dependent oxidoreductase 21 350 1.4E-56 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 SUPERFAMILY SSF54373 250 342 3.66E-10 T 11-10-2018 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 Gene3D G3DSA:3.50.50.60 18 379 8.2E-139 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 400 525 1.1E-21 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_021015 86fae6ed491b4a6bd9e09a8eea4b5981 544 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 ABE28_006855 f16c42a557187d606aea8ec6d2ea115a 133 Gene3D G3DSA:3.10.129.10 1 129 3.3E-34 T 11-10-2018 ABE28_006855 f16c42a557187d606aea8ec6d2ea115a 133 PIRSF PIRSF003230 1 133 1.1E-19 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 ABE28_006855 f16c42a557187d606aea8ec6d2ea115a 133 SUPERFAMILY SSF54637 1 127 2.42E-33 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_006855 f16c42a557187d606aea8ec6d2ea115a 133 Pfam PF13279 Thioesterase-like superfamily 8 126 1.9E-14 T 11-10-2018 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 Pfam PF01259 SAICAR synthetase 7 230 1.3E-66 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 Gene3D G3DSA:3.30.470.20 85 221 4.8E-96 T 11-10-2018 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 32.125 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 11-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 6.6E-77 T 11-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 Gene3D G3DSA:3.30.200.20 7 231 4.8E-96 T 11-10-2018 ABE28_001900 b426bfbe9c8451dc129bd4e9eda6e6ea 239 SUPERFAMILY SSF56104 2 236 2.81E-82 T 11-10-2018 ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 SUPERFAMILY SSF48024 8 119 8.11E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 1.0E-119 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 442 3.0E-187 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 Gene3D G3DSA:1.10.860.10 1 166 4.8E-66 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 SUPERFAMILY SSF52540 183 433 1.36E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 2.0E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ABE28_023700 4f6e00f179c3ebc58ddfc998896ef273 454 Gene3D G3DSA:3.40.50.300 167 454 2.0E-120 T 11-10-2018 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 SUPERFAMILY SSF52374 6 577 4.96E-143 T 11-10-2018 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Gene3D G3DSA:3.40.50.620 28 528 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Gene3D G3DSA:1.10.287.380 809 881 1.7E-23 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 49 60 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 TIGRFAM TIGR00422 valS: valine--tRNA ligase 8 863 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Gene3D G3DSA:1.10.730.10 8 744 0.0 T 11-10-2018 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Hamap MF_02004 Valine--tRNA ligase [valS]. 8 881 16.25 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 SUPERFAMILY SSF50677 197 347 1.09E-64 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Pfam PF08264 Anticodon-binding domain of tRNA 610 755 2.2E-43 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 21 566 7.8E-223 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 SUPERFAMILY SSF46589 816 880 8.89E-17 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Gene3D G3DSA:3.90.740.10 181 347 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 PRINTS PR00986 Valyl-tRNA synthetase signature 447 468 3.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 PRINTS PR00986 Valyl-tRNA synthetase signature 351 364 3.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 PRINTS PR00986 Valyl-tRNA synthetase signature 42 53 3.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 3.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 PRINTS PR00986 Valyl-tRNA synthetase signature 479 497 3.8E-39 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 SUPERFAMILY SSF47323 579 831 5.61E-77 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016425 ec5c818972bc46d5593c2bc59b6487df 883 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 816 881 1.6E-23 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 ABE28_020050 d456470d981cc9b2f32550219252ed90 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 293 1.4E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_020050 d456470d981cc9b2f32550219252ed90 300 Gene3D G3DSA:1.10.3720.10 50 299 5.9E-75 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_020050 d456470d981cc9b2f32550219252ed90 300 SUPERFAMILY SSF161098 54 286 9.68E-64 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_014215 78956c7b9c1e99e3360c625741b4c5d2 153 Pfam PF10673 Protein of unknown function (DUF2487) 9 148 2.9E-50 T 11-10-2018 IPR019615 Protein of unknown function DUF2487 ABE28_015930 b79f1ad037d750df5294e1df62deceff 348 Pfam PF13439 Glycosyltransferase Family 4 13 164 2.4E-19 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_015930 b79f1ad037d750df5294e1df62deceff 348 Gene3D G3DSA:3.40.50.2000 161 334 1.8E-72 T 11-10-2018 ABE28_015930 b79f1ad037d750df5294e1df62deceff 348 SUPERFAMILY SSF53756 10 348 4.71E-72 T 11-10-2018 ABE28_015930 b79f1ad037d750df5294e1df62deceff 348 Pfam PF00534 Glycosyl transferases group 1 167 328 1.5E-37 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_015930 b79f1ad037d750df5294e1df62deceff 348 Gene3D G3DSA:3.40.50.2000 13 343 1.8E-72 T 11-10-2018 ABE28_002410 f295ef6bc2850c0dfc60e29597738405 67 Pfam PF04328 Selenoprotein, putative 5 67 9.4E-25 T 11-10-2018 IPR007423 Selenoprotein, putative ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 SMART SM01091 353 430 1.9E-20 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 SMART SM00116 224 273 0.047 T 11-10-2018 IPR000644 CBS domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 SMART SM00116 289 337 12.0 T 11-10-2018 IPR000644 CBS domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Pfam PF01595 Domain of unknown function DUF21 8 200 6.0E-48 T 11-10-2018 IPR002550 CNNM, transmembrane domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Gene3D G3DSA:3.30.465.10 347 428 4.4E-15 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Pfam PF03471 Transporter associated domain 354 428 1.5E-14 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Gene3D G3DSA:3.10.580.10 194 346 1.8E-49 T 11-10-2018 ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 SUPERFAMILY SSF54631 203 340 2.65E-31 T 11-10-2018 ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Pfam PF00571 CBS domain 216 270 7.8E-7 T 11-10-2018 IPR000644 CBS domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 Pfam PF00571 CBS domain 288 337 6.0E-4 T 11-10-2018 IPR000644 CBS domain ABE28_005320 d1661cc88f8fd8d3f3577d344a06b525 449 SUPERFAMILY SSF56176 351 431 2.4E-16 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 170 5.5E-52 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:3.30.70.370 609 870 5.6E-108 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 172 266 5.6E-32 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 821 834 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 646 669 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 676 689 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 759 770 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 600 622 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 623 638 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 725 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 807 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 PRINTS PR00868 DNA-polymerase family A (pol I) signature 737 748 2.2E-81 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SUPERFAMILY SSF53098 303 465 1.09E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 ProSitePatterns PS00447 DNA polymerase family A signature. 700 719 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SMART SM00475 3 262 1.7E-141 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Pfam PF00476 DNA polymerase family A 498 871 1.0E-158 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SUPERFAMILY SSF56672 468 874 2.56E-155 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SMART SM00279 173 208 5.5E-17 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:1.20.1060.10 489 603 1.2E-42 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SMART SM00482 631 838 4.6E-120 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:1.10.150.20 174 247 2.9E-95 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:1.10.150.20 655 798 5.6E-108 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:3.30.420.10 298 488 1.2E-59 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SUPERFAMILY SSF47807 172 287 4.78E-32 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SUPERFAMILY SSF88723 2 170 1.7E-53 T 11-10-2018 IPR029060 PIN-like domain superfamily ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 Gene3D G3DSA:3.40.50.1010 5 278 2.9E-95 T 11-10-2018 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 TIGRFAM TIGR00593 pola: DNA polymerase I 5 874 0.0 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_016925 cacca472fbe30e9be92373fb4a2c6219 874 SMART SM00474 298 464 3.1E-8 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 ABE28_000665 ecdc7ee263ecc94c0464958615ac7674 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 8.6E-51 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000665 ecdc7ee263ecc94c0464958615ac7674 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.609 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000665 ecdc7ee263ecc94c0464958615ac7674 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 1.4E-46 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000665 ecdc7ee263ecc94c0464958615ac7674 120 Gene3D G3DSA:3.30.420.100 5 120 1.3E-46 T 11-10-2018 ABE28_000665 ecdc7ee263ecc94c0464958615ac7674 120 SUPERFAMILY SSF53137 7 118 2.4E-54 T 11-10-2018 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 6.4E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-11 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 Pfam PF03466 LysR substrate binding domain 89 290 1.9E-44 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 Gene3D G3DSA:3.40.190.290 92 295 9.3E-59 T 11-10-2018 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 Gene3D G3DSA:1.10.10.10 1 91 1.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 SUPERFAMILY SSF53850 90 292 9.41E-40 T 11-10-2018 ABE28_003550 3622a2f415b6c53feb283ed64c20754d 298 SUPERFAMILY SSF46785 1 84 1.74E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003860 d901eaab04a19094ea2721a9a8b7dfe5 159 Gene3D G3DSA:3.40.630.30 2 156 1.2E-16 T 11-10-2018 ABE28_003860 d901eaab04a19094ea2721a9a8b7dfe5 159 SUPERFAMILY SSF55729 5 146 2.16E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003860 d901eaab04a19094ea2721a9a8b7dfe5 159 Pfam PF00583 Acetyltransferase (GNAT) family 30 138 2.5E-12 T 11-10-2018 IPR000182 GNAT domain ABE28_006140 f6b03a1902ee4648ca806d8064ce05b5 131 Gene3D G3DSA:3.40.30.10 1 131 6.8E-48 T 11-10-2018 ABE28_006140 f6b03a1902ee4648ca806d8064ce05b5 131 Pfam PF03960 ArsC family 5 113 3.8E-24 T 11-10-2018 IPR006660 Arsenate reductase-like ABE28_006140 f6b03a1902ee4648ca806d8064ce05b5 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 38.953 T 11-10-2018 IPR023731 Regulatory protein Spx GO:0045892 ABE28_006140 f6b03a1902ee4648ca806d8064ce05b5 131 SUPERFAMILY SSF52833 1 129 2.95E-40 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_006140 f6b03a1902ee4648ca806d8064ce05b5 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 5.5E-38 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABE28_009755 0b698e17a1944617fd5b74571f7c31d3 210 Pfam PF02525 Flavodoxin-like fold 15 186 5.8E-22 T 11-10-2018 IPR003680 Flavodoxin-like fold ABE28_009755 0b698e17a1944617fd5b74571f7c31d3 210 SUPERFAMILY SSF52218 13 190 1.71E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_009755 0b698e17a1944617fd5b74571f7c31d3 210 Gene3D G3DSA:3.40.50.360 11 210 2.4E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_010685 3a4c4e3a1124fd80393b183253904530 339 Gene3D G3DSA:3.40.50.720 1 250 5.2E-70 T 11-10-2018 ABE28_010685 3a4c4e3a1124fd80393b183253904530 339 SUPERFAMILY SSF69572 2 329 4.71E-80 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABE28_010685 3a4c4e3a1124fd80393b183253904530 339 Pfam PF00899 ThiF family 5 241 6.6E-56 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABE28_003375 917277a830dc2012bd3540e387221a10 246 SUPERFAMILY SSF52540 1 240 1.69E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003375 917277a830dc2012bd3540e387221a10 246 Gene3D G3DSA:3.40.50.300 1 246 1.6E-75 T 11-10-2018 ABE28_003375 917277a830dc2012bd3540e387221a10 246 Pfam PF00005 ABC transporter 17 169 5.5E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003375 917277a830dc2012bd3540e387221a10 246 PIRSF PIRSF039085 1 245 5.1E-116 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_003375 917277a830dc2012bd3540e387221a10 246 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_003375 917277a830dc2012bd3540e387221a10 246 SMART SM00382 26 218 1.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_024160 9d520cedcd7a029ee01fd89cf8b9ab48 768 Pfam PF11308 Glycosyl hydrolases related to GH101 family, GH129 400 724 2.1E-115 T 11-10-2018 IPR021459 Glycosyl hydrolases related to GH101 family, GHL1-GHL3 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 Pfam PF00534 Glycosyl transferases group 1 287 433 1.2E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 Gene3D G3DSA:3.40.50.2000 3 471 7.2E-179 T 11-10-2018 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 473 5.4E-177 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 Gene3D G3DSA:3.40.50.2000 250 457 7.2E-179 T 11-10-2018 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 Pfam PF08323 Starch synthase catalytic domain 2 237 5.5E-84 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 SUPERFAMILY SSF53756 3 475 5.23E-127 T 11-10-2018 ABE28_012005 12e17d820d3b92c4e824ec260d085f0c 479 Hamap MF_00484 Glycogen synthase [glgA]. 1 473 46.293 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 8.4E-43 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 Gene3D G3DSA:3.40.390.30 1 157 1.7E-46 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 156 24.254 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 Pfam PF02130 Uncharacterized protein family UPF0054 13 152 1.2E-48 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 ABE28_015425 75a3ae8102e27a38972bff5ae1db0dc9 158 SUPERFAMILY SSF55486 3 156 4.94E-45 T 11-10-2018 ABE28_011300 90d85fb2b1bca4ed799a36bc675e57b3 121 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 92 2.9E-20 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 ABE28_014345 2f2746c00174428c4279f3996aa8158b 43 Pfam PF14140 YpzI-like protein 1 42 1.1E-27 T 11-10-2018 IPR025414 YpzI-like protein ABE28_018960 46bb9f836fa255ad9b161291323e505e 138 SUPERFAMILY SSF54593 9 132 8.59E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018960 46bb9f836fa255ad9b161291323e505e 138 Gene3D G3DSA:3.10.180.10 1 138 4.7E-54 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018960 46bb9f836fa255ad9b161291323e505e 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 10 127 1.8E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Pfam PF00072 Response regulator receiver domain 5 109 9.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Gene3D G3DSA:1.10.10.60 413 454 4.4E-7 T 11-10-2018 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 SUPERFAMILY SSF46689 356 452 1.25E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Gene3D G3DSA:1.10.8.60 313 392 2.4E-22 T 11-10-2018 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 SMART SM00448 3 113 3.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Pfam PF00158 Sigma-54 interaction domain 143 308 5.4E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 SUPERFAMILY SSF52172 3 185 1.27E-38 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Pfam PF02954 Bacterial regulatory protein, Fis family 414 452 4.9E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Gene3D G3DSA:3.40.50.2300 4 120 4.4E-30 T 11-10-2018 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 SMART SM00382 162 305 6.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 Gene3D G3DSA:3.40.50.300 128 312 5.9E-63 T 11-10-2018 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 SUPERFAMILY SSF52540 142 385 6.56E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011700 7dc2b98ab5da84ad4c66a0b6295db740 458 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 2.2E-22 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 Gene3D G3DSA:3.10.430.100 60 148 1.2E-31 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 5.8E-30 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 5.1E-50 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 Gene3D G3DSA:3.40.5.10 1 52 4.3E-25 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 SUPERFAMILY SSF55658 1 55 1.17E-17 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 25.433 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_023705 bd0be778f681a1033b39b6d89147bb62 149 SUPERFAMILY SSF55653 58 146 1.7E-27 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 402 3.3E-83 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 342 419 3.8E-21 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 Pfam PF00460 Flagella basal body rod protein 5 35 2.8E-12 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 Pfam PF07559 Flagellar basal body protein FlaE 185 301 1.2E-11 T 11-10-2018 IPR011491 Flagellar hook protein FlgE ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 Gene3D G3DSA:2.60.98.20 144 305 1.6E-9 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily ABE28_007990 18c4ce611dc75d3ebce8875aa1e5629f 421 SUPERFAMILY SSF117143 91 381 1.44E-57 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_014155 12a839dd3c29d218878ba36867f09172 379 Pfam PF00534 Glycosyl transferases group 1 188 351 2.4E-42 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_014155 12a839dd3c29d218878ba36867f09172 379 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 3 373 1.1E-173 T 11-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 ABE28_014155 12a839dd3c29d218878ba36867f09172 379 Pfam PF13439 Glycosyltransferase Family 4 13 177 2.4E-22 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_014155 12a839dd3c29d218878ba36867f09172 379 Gene3D G3DSA:3.40.50.2000 22 369 5.5E-121 T 11-10-2018 ABE28_014155 12a839dd3c29d218878ba36867f09172 379 Gene3D G3DSA:3.40.50.2000 175 356 5.5E-121 T 11-10-2018 ABE28_014155 12a839dd3c29d218878ba36867f09172 379 SUPERFAMILY SSF53756 8 374 1.33E-86 T 11-10-2018 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 Gene3D G3DSA:3.65.10.10 15 423 4.9E-159 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 SUPERFAMILY SSF55205 7 426 5.76E-141 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 PIRSF PIRSF000505 1 428 2.2E-122 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 ProSitePatterns PS00104 EPSP synthase signature 1. 89 103 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 15 427 5.0E-136 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 ProSitePatterns PS00885 EPSP synthase signature 2. 340 358 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 423 1.4E-131 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 11 428 33.872 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 ABE28_014230 311a6762abbe5157d0315b85f248ef2b 428 Gene3D G3DSA:3.65.10.10 23 231 4.9E-159 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 ProSitePatterns PS00622 LuxR-type HTH domain signature. 178 205 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 178 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 206 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 194 6.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 Pfam PF00196 Bacterial regulatory proteins, luxR family 163 218 2.4E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 SMART SM00421 161 218 4.7E-29 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 Pfam PF00072 Response regulator receiver domain 5 117 1.9E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 SMART SM00448 3 116 3.4E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 SUPERFAMILY SSF46894 153 225 8.16E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 Gene3D G3DSA:3.40.50.12740 4 224 3.1E-72 T 11-10-2018 ABE28_022490 5a42f0dab61cb0cb410328cc0f381ab8 227 SUPERFAMILY SSF52172 3 134 4.13E-36 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_006770 738f0235f645162855adba5d4c860b27 524 SUPERFAMILY SSF54980 390 461 3.96E-16 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_006770 738f0235f645162855adba5d4c860b27 524 SUPERFAMILY SSF50447 258 386 9.9E-27 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_006770 738f0235f645162855adba5d4c860b27 524 Gene3D G3DSA:3.30.70.3280 387 523 7.7E-46 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily ABE28_006770 738f0235f645162855adba5d4c860b27 524 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 519 2.0E-201 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ABE28_006770 738f0235f645162855adba5d4c860b27 524 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 148 6.4E-22 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 2 521 49.356 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 ABE28_006770 738f0235f645162855adba5d4c860b27 524 PRINTS PR00315 GTP-binding elongation factor signature 63 71 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 PRINTS PR00315 GTP-binding elongation factor signature 13 26 1.8E-11 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 Pfam PF00009 Elongation factor Tu GTP binding domain 11 273 5.2E-50 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 Gene3D G3DSA:3.40.50.300 108 271 4.1E-103 T 11-10-2018 ABE28_006770 738f0235f645162855adba5d4c860b27 524 Gene3D G3DSA:3.40.50.300 70 375 4.1E-103 T 11-10-2018 ABE28_006770 738f0235f645162855adba5d4c860b27 524 Pfam PF03144 Elongation factor Tu domain 2 310 376 6.5E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABE28_006770 738f0235f645162855adba5d4c860b27 524 SUPERFAMILY SSF52540 8 273 3.54E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006770 738f0235f645162855adba5d4c860b27 524 Pfam PF16658 Class II release factor RF3, C-terminal domain 384 509 8.0E-43 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal ABE28_006770 738f0235f645162855adba5d4c860b27 524 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 56 71 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ABE28_018005 a8ef1c0aa65079c045788e48e84cc404 228 Gene3D G3DSA:3.40.50.360 21 228 1.5E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_018005 a8ef1c0aa65079c045788e48e84cc404 228 Pfam PF02525 Flavodoxin-like fold 22 223 7.7E-31 T 11-10-2018 IPR003680 Flavodoxin-like fold ABE28_018005 a8ef1c0aa65079c045788e48e84cc404 228 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 22 225 22.517 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ABE28_018005 a8ef1c0aa65079c045788e48e84cc404 228 SUPERFAMILY SSF52218 21 225 7.71E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_004975 7212cceb6448dc5836560faabafbc029 436 Gene3D G3DSA:1.20.1250.20 228 429 1.3E-39 T 11-10-2018 ABE28_004975 7212cceb6448dc5836560faabafbc029 436 SUPERFAMILY SSF103473 11 423 7.06E-102 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_004975 7212cceb6448dc5836560faabafbc029 436 PIRSF PIRSF002808 2 434 1.9E-46 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 ABE28_004975 7212cceb6448dc5836560faabafbc029 436 Gene3D G3DSA:1.20.1250.20 12 207 2.4E-52 T 11-10-2018 ABE28_004975 7212cceb6448dc5836560faabafbc029 436 Pfam PF07690 Major Facilitator Superfamily 25 383 2.7E-68 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 3.4E-33 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 Gene3D G3DSA:3.30.160.20 1 73 9.4E-36 T 11-10-2018 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 SUPERFAMILY SSF54211 80 159 8.09E-25 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.3E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 SUPERFAMILY SSF54768 8 76 1.15E-25 T 11-10-2018 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 1.4E-71 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 Gene3D G3DSA:3.30.230.10 74 166 5.5E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000670 7524557a3cd3d8f730e8ac18232a2e39 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 36.68 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 TIGRFAM TIGR01227 hutG: formimidoylglutamase 10 314 1.6E-89 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 Pfam PF00491 Arginase family 48 314 1.2E-54 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 Hamap MF_00737 Formimidoylglutamase [hutG]. 5 315 38.699 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 PIRSF PIRSF036979 22 319 3.6E-39 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 Gene3D G3DSA:3.40.800.10 2 319 1.8E-100 T 11-10-2018 ABE28_010600 931dbdc1511015e583f9fc586816e606 319 SUPERFAMILY SSF52768 10 316 2.16E-73 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_022350 26864b923c10f78961300a01854abd23 474 Pfam PF01471 Putative peptidoglycan binding domain 393 448 1.4E-15 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_022350 26864b923c10f78961300a01854abd23 474 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 59 377 1.5E-120 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 ABE28_022350 26864b923c10f78961300a01854abd23 474 SMART SM00245 180 371 6.2E-78 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABE28_022350 26864b923c10f78961300a01854abd23 474 SUPERFAMILY SSF47090 383 449 3.27E-17 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_022350 26864b923c10f78961300a01854abd23 474 SUPERFAMILY SSF50156 78 197 1.86E-21 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_022350 26864b923c10f78961300a01854abd23 474 Gene3D G3DSA:2.30.42.10 107 194 5.3E-91 T 11-10-2018 ABE28_022350 26864b923c10f78961300a01854abd23 474 Gene3D G3DSA:3.30.750.44 44 346 5.3E-91 T 11-10-2018 ABE28_022350 26864b923c10f78961300a01854abd23 474 SMART SM00228 107 178 2.8E-15 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_022350 26864b923c10f78961300a01854abd23 474 Gene3D G3DSA:1.10.101.10 377 459 4.1E-16 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_022350 26864b923c10f78961300a01854abd23 474 Gene3D G3DSA:3.90.226.10 195 368 5.3E-91 T 11-10-2018 ABE28_022350 26864b923c10f78961300a01854abd23 474 SUPERFAMILY SSF52096 42 377 3.48E-71 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022350 26864b923c10f78961300a01854abd23 474 Pfam PF13180 PDZ domain 108 184 4.8E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_022350 26864b923c10f78961300a01854abd23 474 Pfam PF03572 Peptidase family S41 209 370 6.4E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 Pfam PF13537 Glutamine amidotransferase domain 96 210 1.1E-23 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 SUPERFAMILY SSF53271 248 465 1.57E-76 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 Pfam PF00156 Phosphoribosyl transferase domain 277 385 1.3E-8 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 Gene3D G3DSA:3.40.50.2020 272 436 3.1E-171 T 11-10-2018 ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 Gene3D G3DSA:3.60.20.10 12 459 3.1E-171 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 457 47.853 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 SUPERFAMILY SSF56235 12 236 2.74E-71 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 458 1.2E-169 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABE28_001920 0ad69ab075d1f284626f10b451a4bc3f 471 PIRSF PIRSF000485 8 470 1.0E-187 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 Pfam PF01416 tRNA pseudouridine synthase 9 104 3.4E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 Pfam PF01416 tRNA pseudouridine synthase 144 245 2.0E-30 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 6.5E-67 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 Gene3D G3DSA:3.30.70.660 107 243 7.9E-49 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 36.364 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 Gene3D G3DSA:3.30.70.580 1 106 3.7E-33 T 11-10-2018 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 SUPERFAMILY SSF55120 1 245 1.87E-83 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000740 eb53a87a19fad3ec03c643d568cc7597 246 PIRSF PIRSF001430 1 246 2.0E-80 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 Gene3D G3DSA:3.40.50.1100 46 144 4.7E-124 T 11-10-2018 ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 305 3.6E-143 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 11 293 9.4E-72 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 Gene3D G3DSA:3.40.50.1100 7 301 4.7E-124 T 11-10-2018 ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 SUPERFAMILY SSF53686 3 305 1.7E-104 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_000375 03bc8490543e606f4f3f2111131d9d38 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 305 3.2E-135 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABE28_022770 e5593565a4eecb9e2cfe2f5869afe0f7 508 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 9 491 17.198 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABE28_022770 e5593565a4eecb9e2cfe2f5869afe0f7 508 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 13 490 1.9E-110 T 11-10-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 ABE28_022770 e5593565a4eecb9e2cfe2f5869afe0f7 508 Pfam PF00361 Proton-conducting membrane transporter 131 431 3.3E-67 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_004295 c1d92e93b602d2a7862d591f42c0b48b 350 Gene3D G3DSA:3.30.300.210 216 350 4.9E-14 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_004295 c1d92e93b602d2a7862d591f42c0b48b 350 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 348 1.1E-59 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_004295 c1d92e93b602d2a7862d591f42c0b48b 350 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 349 3.6E-20 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 3.2E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 3.2E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 3.2E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 SUPERFAMILY SSF54909 63 136 4.34E-13 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_005405 115e050923800beab0dab8c816d33ac1 147 SUPERFAMILY SSF46785 1 60 2.58E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005405 115e050923800beab0dab8c816d33ac1 147 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 1.1E-11 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 Gene3D G3DSA:1.10.10.10 1 51 4.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005405 115e050923800beab0dab8c816d33ac1 147 Gene3D G3DSA:3.30.70.920 52 136 3.7E-15 T 11-10-2018 ABE28_005405 115e050923800beab0dab8c816d33ac1 147 Pfam PF01037 Lrp/AsnC ligand binding domain 74 133 1.3E-8 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_005405 115e050923800beab0dab8c816d33ac1 147 SMART SM00344 1 107 1.7E-25 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1326 1360 6.6E-4 T 11-10-2018 IPR006530 YD repeat ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1276 1317 0.002 T 11-10-2018 IPR006530 YD repeat ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1576 1615 2.5E-6 T 11-10-2018 IPR006530 YD repeat ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1174 1214 1.4E-8 T 11-10-2018 IPR006530 YD repeat ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1785 1866 5.2E-19 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 SUPERFAMILY SSF102824 1898 1987 1.2E-19 T 11-10-2018 IPR038233 Colicin D/E5 nuclease domain superfamily ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 Gene3D G3DSA:3.10.450.200 1895 1993 7.3E-25 T 11-10-2018 IPR037178 Colicin D, C-terminal domain superfamily GO:0004540 ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 Pfam PF05593 RHS Repeat 1195 1230 2.4E-10 T 11-10-2018 IPR031325 RHS repeat ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 Gene3D G3DSA:2.180.10.10 1405 1865 3.7E-19 T 11-10-2018 ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 Pfam PF11429 Colicin D 1907 1988 5.6E-19 T 11-10-2018 IPR024440 Colicin D C-terminal GO:0004540 ABE28_010455 65e872bbc71556e9ac738c2c88be5bdb 1996 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 48 246 2.0E-28 T 11-10-2018 ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 Gene3D G3DSA:3.40.50.12780 1 411 3.3E-116 T 11-10-2018 ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 ProSitePatterns PS00455 Putative AMP-binding domain signature. 166 177 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 SUPERFAMILY SSF56801 4 515 1.7E-148 T 11-10-2018 ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 503 2.0E-18 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 Pfam PF00501 AMP-binding enzyme 9 418 1.4E-102 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_003580 3a2ebd4f48644f08870dc05fb4379f44 521 Gene3D G3DSA:3.30.300.310 414 518 5.8E-34 T 11-10-2018 ABE28_021425 f6629546c9dd96ddab3518d1050c909c 158 Pfam PF00583 Acetyltransferase (GNAT) family 15 118 7.7E-9 T 11-10-2018 IPR000182 GNAT domain ABE28_021425 f6629546c9dd96ddab3518d1050c909c 158 Gene3D G3DSA:3.40.630.30 29 158 2.7E-18 T 11-10-2018 ABE28_021425 f6629546c9dd96ddab3518d1050c909c 158 SUPERFAMILY SSF55729 30 126 5.67E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 356 8.5E-105 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 Gene3D G3DSA:3.40.640.10 43 267 1.4E-108 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 359 57.534 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 Gene3D G3DSA:3.90.1150.10 21 350 1.4E-108 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 Pfam PF00155 Aminotransferase class I and II 30 355 1.1E-52 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_014240 18c6f2d876a923d105dbc90882a1cc01 370 SUPERFAMILY SSF53383 1 361 1.65E-74 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 Gene3D G3DSA:3.30.930.10 1 324 6.4E-114 T 11-10-2018 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 33.554 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 PIRSF PIRSF001549 1 421 3.4E-118 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 410 2.5E-155 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 Gene3D G3DSA:3.40.50.800 327 421 4.3E-24 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 Pfam PF13393 Histidyl-tRNA synthetase 8 313 1.8E-43 T 11-10-2018 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 Pfam PF03129 Anticodon binding domain 331 420 6.7E-16 T 11-10-2018 IPR004154 Anticodon-binding ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 SUPERFAMILY SSF55681 3 318 1.53E-97 T 11-10-2018 ABE28_016145 92a031c6f28b7e6f148b076f6594a9ff 423 SUPERFAMILY SSF52954 329 420 1.51E-23 T 11-10-2018 ABE28_020595 6c2e7ea575c636dabcf67a9a94519f2e 177 Pfam PF13302 Acetyltransferase (GNAT) domain 4 143 1.8E-16 T 11-10-2018 IPR000182 GNAT domain ABE28_020595 6c2e7ea575c636dabcf67a9a94519f2e 177 SUPERFAMILY SSF55729 3 168 1.8E-34 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_020595 6c2e7ea575c636dabcf67a9a94519f2e 177 Gene3D G3DSA:3.40.630.30 1 175 1.7E-44 T 11-10-2018 ABE28_023910 0698b1dba8ee7993be5acafb17475bff 395 SUPERFAMILY SSF103473 6 386 1.7E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_023910 0698b1dba8ee7993be5acafb17475bff 395 Pfam PF07690 Major Facilitator Superfamily 12 323 1.9E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_023910 0698b1dba8ee7993be5acafb17475bff 395 Gene3D G3DSA:1.20.1250.20 1 193 3.1E-17 T 11-10-2018 ABE28_023910 0698b1dba8ee7993be5acafb17475bff 395 Gene3D G3DSA:1.20.1250.20 200 386 2.9E-17 T 11-10-2018 ABE28_022440 b9c0d53b657bb7e9677ead99ac5ec4a6 147 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 140 25.178 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 ABE28_022440 b9c0d53b657bb7e9677ead99ac5ec4a6 147 Gene3D G3DSA:2.30.290.10 1 146 4.1E-51 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ABE28_022440 b9c0d53b657bb7e9677ead99ac5ec4a6 147 SUPERFAMILY SSF141457 1 140 9.68E-46 T 11-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily ABE28_022440 b9c0d53b657bb7e9677ead99ac5ec4a6 147 Pfam PF02623 FliW protein 20 137 3.8E-38 T 11-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 ABE28_013310 b5d7cf9b6eb0244756861b367385dbda 142 SUPERFAMILY SSF51316 2 141 2.35E-60 T 11-10-2018 IPR011057 Mss4-like superfamily ABE28_013310 b5d7cf9b6eb0244756861b367385dbda 142 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 126 36.78 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_013310 b5d7cf9b6eb0244756861b367385dbda 142 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 2 134 1.5E-65 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_013310 b5d7cf9b6eb0244756861b367385dbda 142 Pfam PF01641 SelR domain 6 125 1.8E-49 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 ABE28_013310 b5d7cf9b6eb0244756861b367385dbda 142 Gene3D G3DSA:2.170.150.20 1 142 1.5E-60 T 11-10-2018 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 SUPERFAMILY SSF53597 146 362 9.95E-68 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 Gene3D G3DSA:3.40.430.10 137 366 7.1E-81 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 100 1.0E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 Pfam PF01872 RibD C-terminal domain 148 357 7.9E-58 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 PIRSF PIRSF006769 1 365 3.0E-139 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 Gene3D G3DSA:3.40.140.10 2 136 1.7E-47 T 11-10-2018 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 SUPERFAMILY SSF53927 4 145 1.24E-46 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 147 362 2.0E-68 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 ABE28_021520 f03f384d2eb405d31f37ecd9753bb71f 366 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 8 359 7.1E-122 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 Pfam PF07883 Cupin domain 112 175 3.9E-12 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 SUPERFAMILY SSF51182 59 182 8.65E-26 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 Gene3D G3DSA:1.10.260.40 2 74 2.9E-19 T 11-10-2018 ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 Gene3D G3DSA:2.60.120.10 92 184 5.4E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 SMART SM00530 11 66 7.6E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 SUPERFAMILY SSF47413 3 72 4.56E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_010180 28bbef8f7ed8885e8664c9542676d98b 184 Pfam PF01381 Helix-turn-helix 12 64 5.6E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Gene3D G3DSA:1.20.140.10 248 409 1.8E-40 T 11-10-2018 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 SUPERFAMILY SSF56645 38 260 1.96E-69 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 15 130 8.3E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 247 395 2.2E-36 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Gene3D G3DSA:2.40.110.10 133 247 2.3E-51 T 11-10-2018 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Gene3D G3DSA:1.10.540.10 1 132 4.8E-51 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 SUPERFAMILY SSF47203 245 402 6.12E-45 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_006825 b1ce82df6f8546b0618870ee593194e7 409 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 134 234 1.5E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 141 2.3E-85 T 11-10-2018 IPR013404 Competence operon E, ComEB ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 1.7E-28 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 PIRSF PIRSF006019 1 150 8.1E-60 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 SUPERFAMILY SSF53927 7 140 1.26E-40 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_015570 25d427b0f3f2f6915c545d44aed0f246 186 Gene3D G3DSA:3.40.140.10 2 147 1.2E-46 T 11-10-2018 ABE28_022185 368ff371abc83c2150ef65c407bc800c 328 SUPERFAMILY SSF142338 7 315 2.88E-108 T 11-10-2018 ABE28_022185 368ff371abc83c2150ef65c407bc800c 328 Gene3D G3DSA:3.40.50.12300 4 325 8.8E-134 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily ABE28_022185 368ff371abc83c2150ef65c407bc800c 328 Hamap MF_00973 Gluconeogenesis factor. 6 320 36.295 T 11-10-2018 IPR010119 Gluconeogenesis factor ABE28_022185 368ff371abc83c2150ef65c407bc800c 328 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 10 318 2.0E-131 T 11-10-2018 IPR010119 Gluconeogenesis factor ABE28_022185 368ff371abc83c2150ef65c407bc800c 328 Pfam PF01933 Uncharacterised protein family UPF0052 10 294 9.6E-111 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 ABE28_014950 d3aae742eeee8f1c114033e366ce0889 130 Pfam PF01029 NusB family 5 124 4.5E-37 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ABE28_014950 d3aae742eeee8f1c114033e366ce0889 130 Gene3D G3DSA:1.10.940.10 1 130 4.0E-44 T 11-10-2018 IPR035926 NusB-like superfamily ABE28_014950 d3aae742eeee8f1c114033e366ce0889 130 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 24.392 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABE28_014950 d3aae742eeee8f1c114033e366ce0889 130 SUPERFAMILY SSF48013 2 124 3.66E-38 T 11-10-2018 IPR035926 NusB-like superfamily ABE28_014950 d3aae742eeee8f1c114033e366ce0889 130 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 125 4.8E-44 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 ABE28_004655 5e7543829b3a96a404fbbbcdb3d17118 355 SUPERFAMILY SSF53756 13 346 4.49E-60 T 11-10-2018 ABE28_004655 5e7543829b3a96a404fbbbcdb3d17118 355 Pfam PF13439 Glycosyltransferase Family 4 51 159 1.0E-11 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_004655 5e7543829b3a96a404fbbbcdb3d17118 355 Gene3D G3DSA:3.40.50.2000 15 340 2.4E-57 T 11-10-2018 ABE28_004655 5e7543829b3a96a404fbbbcdb3d17118 355 Pfam PF00534 Glycosyl transferases group 1 167 324 3.8E-26 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_004655 5e7543829b3a96a404fbbbcdb3d17118 355 Gene3D G3DSA:3.40.50.2000 159 330 2.4E-57 T 11-10-2018 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 SUPERFAMILY SSF47005 140 185 2.62E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Gene3D G3DSA:3.30.559.10 207 450 2.4E-89 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 224 452 6.1E-89 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Pfam PF00364 Biotin-requiring enzyme 4 75 3.3E-26 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Gene3D G3DSA:4.10.320.10 136 187 3.0E-19 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Pfam PF02817 e3 binding domain 146 180 8.8E-14 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 SUPERFAMILY SSF52777 220 452 8.9E-88 T 11-10-2018 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 SUPERFAMILY SSF51230 3 87 8.51E-27 T 11-10-2018 IPR011053 Single hybrid motif ABE28_007155 019d13d700e3754b20402710f2e7249a 454 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABE28_007155 019d13d700e3754b20402710f2e7249a 454 Gene3D G3DSA:2.40.50.100 2 81 2.1E-28 T 11-10-2018 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 219 2.8E-92 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 218 44.751 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 PIRSF PIRSF001586 1 223 3.4E-89 T 11-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 206 6.1E-43 T 11-10-2018 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 SUPERFAMILY SSF52317 1 220 1.06E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 SMART SM01211 1 220 1.1E-135 T 11-10-2018 ABE28_001910 524bd94ec540ce96308a8e6fca9a5cfb 228 Gene3D G3DSA:3.40.50.880 1 221 4.3E-74 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 SMART SM00862 145 220 1.3E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 Pfam PF00072 Response regulator receiver domain 4 112 4.7E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 SMART SM00448 2 112 8.8E-43 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 Gene3D G3DSA:1.10.10.10 127 224 8.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 SUPERFAMILY SSF52172 1 158 6.12E-44 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 Gene3D G3DSA:3.40.50.2300 1 126 5.2E-39 T 11-10-2018 ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 SUPERFAMILY SSF46894 127 221 3.46E-24 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_000935 79c1fc9dcd5c72b41f4c9f8de8ba8483 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 220 4.0E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 Pfam PF00005 ABC transporter 371 519 4.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 Gene3D G3DSA:3.40.50.300 350 595 7.3E-90 T 11-10-2018 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 SMART SM00382 379 571 2.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 Pfam PF00664 ABC transporter transmembrane region 37 308 1.7E-57 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 Gene3D G3DSA:1.20.1560.10 4 340 8.3E-104 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 SUPERFAMILY SSF52540 347 588 2.22E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002385 00e6831be1c551a1d6843664f52607b9 596 SUPERFAMILY SSF90123 16 337 7.32E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_023515 5c583582ed678b65b9668d0392922857 399 SUPERFAMILY SSF53335 82 393 3.9E-63 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023515 5c583582ed678b65b9668d0392922857 399 Gene3D G3DSA:3.40.50.150 182 398 2.6E-57 T 11-10-2018 ABE28_023515 5c583582ed678b65b9668d0392922857 399 SMART SM00359 5 90 0.0089 T 11-10-2018 IPR002478 PUA domain GO:0003723 ABE28_023515 5c583582ed678b65b9668d0392922857 399 SUPERFAMILY SSF88697 7 74 1.37E-17 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_023515 5c583582ed678b65b9668d0392922857 399 Gene3D G3DSA:2.30.130.10 5 73 4.0E-21 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 ABE28_023515 5c583582ed678b65b9668d0392922857 399 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 105 378 5.6E-30 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 ABE28_023515 5c583582ed678b65b9668d0392922857 399 Gene3D G3DSA:3.30.750.80 74 181 2.8E-35 T 11-10-2018 ABE28_014645 0cd808d10e607b3aed02c1f5cc148a72 152 Pfam PF01475 Ferric uptake regulator family 15 136 3.4E-40 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABE28_014645 0cd808d10e607b3aed02c1f5cc148a72 152 SUPERFAMILY SSF46785 7 141 7.35E-39 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014645 0cd808d10e607b3aed02c1f5cc148a72 152 Gene3D G3DSA:3.30.1490.190 93 151 6.3E-16 T 11-10-2018 ABE28_014645 0cd808d10e607b3aed02c1f5cc148a72 152 Gene3D G3DSA:1.10.10.10 1 88 3.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 SUPERFAMILY SSF56235 36 520 1.02E-116 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 Gene3D G3DSA:1.10.246.230 242 343 1.9E-20 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 Gene3D G3DSA:3.60.20.40 348 521 3.4E-53 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 226 242 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 348 366 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 370 388 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 117 135 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 255 274 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 422 439 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 135 154 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 398 413 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 62 87 1.5E-50 T 11-10-2018 ABE28_017840 3a3c4a2021ca21c94ed052f199b3547e 524 Pfam PF01019 Gamma-glutamyltranspeptidase 55 518 1.4E-105 T 11-10-2018 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 Gene3D G3DSA:2.40.180.10 16 456 5.5E-155 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 Pfam PF06628 Catalase-related immune-responsive 390 449 1.9E-14 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 293 320 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 88 106 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 128 146 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 325 351 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 109 126 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PRINTS PR00067 Catalase signature 25 48 4.0E-53 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 SMART SM01060 12 387 2.4E-170 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 ProSitePatterns PS00438 Catalase proximal active site signature. 48 64 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 SUPERFAMILY SSF56634 21 454 3.66E-151 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 Pfam PF00199 Catalase 20 364 2.3E-130 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PIRSF PIRSF038928 379 456 1.5E-8 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_011565 dc515a280ff4c38e0fa3908f569340c0 456 PIRSF PIRSF038928 10 390 8.2E-152 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_021630 b841bbf34196b795f2cec77f74d95ad4 333 Gene3D G3DSA:3.90.1200.10 99 315 4.5E-24 T 11-10-2018 ABE28_021630 b841bbf34196b795f2cec77f74d95ad4 333 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 3 314 8.2E-107 T 11-10-2018 IPR014254 Spore coat protein YutH ABE28_021630 b841bbf34196b795f2cec77f74d95ad4 333 SUPERFAMILY SSF56112 36 316 3.16E-7 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 SUPERFAMILY SSF54631 204 341 1.39E-29 T 11-10-2018 ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Pfam PF00571 CBS domain 217 270 2.9E-5 T 11-10-2018 IPR000644 CBS domain ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Pfam PF00571 CBS domain 287 338 5.4E-6 T 11-10-2018 IPR000644 CBS domain ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Gene3D G3DSA:3.30.465.10 350 429 2.1E-16 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Pfam PF01595 Domain of unknown function DUF21 7 201 2.9E-46 T 11-10-2018 IPR002550 CNNM, transmembrane domain ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Pfam PF03471 Transporter associated domain 355 429 1.3E-15 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 SUPERFAMILY SSF56176 350 429 5.73E-17 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 SMART SM01091 354 431 1.7E-20 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_005340 e6d7d4486fba2598aef8b7dcdc705ab7 443 Gene3D G3DSA:3.10.580.10 197 349 4.8E-49 T 11-10-2018 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 1.5E-35 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 SUPERFAMILY SSF52540 3 304 1.7E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 5.4E-161 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.141 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 6.5E-40 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Gene3D G3DSA:3.40.50.300 4 281 3.7E-157 T 11-10-2018 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Pfam PF01926 50S ribosome-binding GTPase 5 122 1.2E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 SUPERFAMILY SSF81271 282 363 2.62E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Gene3D G3DSA:1.10.150.300 113 200 3.7E-157 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 PIRSF PIRSF006641 1 366 1.8E-167 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 ABE28_023735 49761421bffb4f9d06b6855a9cf21f1a 366 Gene3D G3DSA:3.10.20.30 48 364 3.7E-157 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 Gene3D G3DSA:3.40.50.620 1 213 4.3E-98 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 358 41.656 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 Gene3D G3DSA:2.40.30.10 279 370 2.9E-29 T 11-10-2018 ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 Gene3D G3DSA:2.30.30.280 214 278 3.0E-27 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 Pfam PF03054 tRNA methyl transferase 9 357 3.1E-150 T 11-10-2018 ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 357 1.7E-142 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 ABE28_015785 3c0aa67ee0fa2e3e9ca6540fd37541d9 371 SUPERFAMILY SSF52402 7 244 2.18E-61 T 11-10-2018 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Pfam PF00512 His Kinase A (phospho-acceptor) domain 336 395 2.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 200 326 5.6E-16 T 11-10-2018 IPR000014 PAS domain ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 198 6.3E-7 T 11-10-2018 IPR000014 PAS domain ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Gene3D G3DSA:3.30.450.20 194 317 4.4E-16 T 11-10-2018 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SMART SM00388 334 397 2.3E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SUPERFAMILY SSF55785 188 312 2.97E-18 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SUPERFAMILY SSF55785 64 189 1.71E-12 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SMART SM00387 439 543 3.4E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Pfam PF13188 PAS domain 203 252 6.5E-8 T 11-10-2018 IPR000014 PAS domain ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SUPERFAMILY SSF47384 324 395 6.28E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SUPERFAMILY SSF55874 387 541 6.02E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Gene3D G3DSA:3.30.450.20 60 193 2.6E-13 T 11-10-2018 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SMART SM00091 203 270 3.7E-8 T 11-10-2018 IPR000014 PAS domain ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 SMART SM00091 72 139 37.0 T 11-10-2018 IPR000014 PAS domain ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Pfam PF08448 PAS fold 79 192 1.7E-6 T 11-10-2018 IPR013656 PAS fold-4 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 442 541 2.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Gene3D G3DSA:3.30.565.10 399 543 5.7E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 1.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 474 488 1.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 1.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 502 1.7E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_002125 167243847c78ee5bdaa1f3c6c1030990 543 Gene3D G3DSA:1.10.287.130 318 396 7.0E-18 T 11-10-2018 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 6 373 9.1E-186 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 SUPERFAMILY SSF51713 3 369 1.24E-162 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 Gene3D G3DSA:3.20.20.105 2 373 1.5E-171 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 Pfam PF01702 Queuine tRNA-ribosyltransferase 132 365 2.2E-92 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 6 372 2.1E-175 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_016205 faa1474a8f72066abf0327c31261ab41 379 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 4 368 57.978 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 ABE28_007120 03d38dd8c636e7c02632999532889693 556 SUPERFAMILY SSF56281 11 424 3.17E-95 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_007120 03d38dd8c636e7c02632999532889693 556 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.436 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABE28_007120 03d38dd8c636e7c02632999532889693 556 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 11-10-2018 IPR001587 Ribonuclease J, conserved site ABE28_007120 03d38dd8c636e7c02632999532889693 556 SMART SM00849 21 215 1.1E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_007120 03d38dd8c636e7c02632999532889693 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 407 1.2E-8 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABE28_007120 03d38dd8c636e7c02632999532889693 556 Gene3D G3DSA:3.10.20.580 449 555 3.4E-40 T 11-10-2018 ABE28_007120 03d38dd8c636e7c02632999532889693 556 Gene3D G3DSA:3.40.50.10710 207 357 6.5E-190 T 11-10-2018 ABE28_007120 03d38dd8c636e7c02632999532889693 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 1.7E-226 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 ABE28_007120 03d38dd8c636e7c02632999532889693 556 PIRSF PIRSF004803 1 555 1.1E-244 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABE28_007120 03d38dd8c636e7c02632999532889693 556 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 8.9E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_007120 03d38dd8c636e7c02632999532889693 556 Gene3D G3DSA:3.60.15.10 12 442 6.5E-190 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_004020 4efa8df6c6ba2f081af33fd3e1877229 361 SUPERFAMILY SSF51395 10 351 1.04E-108 T 11-10-2018 ABE28_004020 4efa8df6c6ba2f081af33fd3e1877229 361 Gene3D G3DSA:3.20.20.70 8 359 8.9E-115 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_004020 4efa8df6c6ba2f081af33fd3e1877229 361 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 16 345 2.2E-88 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 Gene3D G3DSA:3.40.190.290 92 295 2.5E-42 T 11-10-2018 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 SUPERFAMILY SSF46785 2 87 1.87E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 Pfam PF03466 LysR substrate binding domain 88 292 1.2E-42 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 SUPERFAMILY SSF53850 89 293 2.39E-35 T 11-10-2018 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 Gene3D G3DSA:1.10.10.10 1 91 1.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_010905 9c23b7c79d35c3115facb8fca69cea6e 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.1E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 Pfam PF00549 CoA-ligase 151 262 1.2E-16 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 2.7E-149 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 Pfam PF02629 CoA binding domain 6 99 2.0E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 Gene3D G3DSA:3.40.50.720 1 123 1.2E-52 T 11-10-2018 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 SUPERFAMILY SSF52210 123 287 3.27E-55 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 SUPERFAMILY SSF51735 1 122 5.42E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 PIRSF PIRSF001553 1 291 3.9E-135 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 SMART SM00881 4 100 1.7E-34 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.789 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 Gene3D G3DSA:3.40.50.261 124 289 3.6E-71 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-38 T 11-10-2018 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-38 T 11-10-2018 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-38 T 11-10-2018 ABE28_007890 b21354724d2b3fc664b53ac60f6812ee 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-38 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 SUPERFAMILY SSF51735 192 424 1.78E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Gene3D G3DSA:3.40.50.720 199 352 7.9E-142 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 225 245 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 183 205 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 351 362 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 103 117 2.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 192 423 2.4E-78 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 SUPERFAMILY SSF53223 16 194 1.79E-65 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 111 124 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Gene3D G3DSA:3.40.50.10860 44 198 7.9E-142 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Gene3D G3DSA:1.10.8.1210 19 353 7.9E-142 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 PIRSF PIRSF000185 10 425 1.6E-171 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Gene3D G3DSA:1.10.8.1210 379 425 1.2E-16 T 11-10-2018 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 SMART SM00839 194 423 8.8E-96 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014405 866b4f1431f7bb578369e15259f4a16f 425 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 48 174 7.3E-54 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_002615 9d4d56d264bfa886cee0e3e802d79caa 300 SUPERFAMILY SSF48576 11 288 1.39E-73 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_002615 9d4d56d264bfa886cee0e3e802d79caa 300 Pfam PF00494 Squalene/phytoene synthase 20 274 1.2E-66 T 11-10-2018 ABE28_002615 9d4d56d264bfa886cee0e3e802d79caa 300 Gene3D G3DSA:1.10.600.10 2 284 5.5E-91 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_002615 9d4d56d264bfa886cee0e3e802d79caa 300 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 162 188 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Gene3D G3DSA:3.30.230.10 24 204 1.7E-138 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Hamap MF_00246 Galactokinase [galK]. 27 389 48.99 T 11-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Pfam PF00288 GHMP kinases N terminal domain 118 184 4.2E-12 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Pfam PF08544 GHMP kinases C terminal 287 369 1.2E-12 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00959 Mevalonate kinase family signature 165 184 8.8E-44 T 11-10-2018 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00959 Mevalonate kinase family signature 27 51 8.8E-44 T 11-10-2018 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00959 Mevalonate kinase family signature 336 353 8.8E-44 T 11-10-2018 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00959 Mevalonate kinase family signature 122 144 8.8E-44 T 11-10-2018 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Pfam PF10509 Galactokinase galactose-binding signature 9 59 2.4E-20 T 11-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 ProSitePatterns PS00106 Galactokinase signature. 29 40 - T 11-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 TIGRFAM TIGR00131 gal_kin: galactokinase 6 388 6.6E-131 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 124 135 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00473 Galactokinase signature 29 47 8.3E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00473 Galactokinase signature 115 133 8.3E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00473 Galactokinase signature 272 286 8.3E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PRINTS PR00473 Galactokinase signature 94 105 8.3E-28 T 11-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 Gene3D G3DSA:3.30.70.890 205 365 1.7E-138 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 SUPERFAMILY SSF54211 4 206 1.37E-63 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 SUPERFAMILY SSF55060 209 389 8.32E-56 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_020030 267be504cec5372d492c8b4b03e017a2 390 PIRSF PIRSF000530 1 390 1.0E-122 T 11-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_000555 3f20762cd4b37f552805948e2fe95e71 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 81 7.9E-12 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 ABE28_000555 3f20762cd4b37f552805948e2fe95e71 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 23.017 T 11-10-2018 IPR023460 Ribosomal protein L7Ae, putative ABE28_000555 3f20762cd4b37f552805948e2fe95e71 82 Gene3D G3DSA:3.30.1330.30 1 80 1.1E-19 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_000555 3f20762cd4b37f552805948e2fe95e71 82 SUPERFAMILY SSF55315 4 81 1.39E-17 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_022540 1193d0036e95367fe76bc062d904791e 265 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022540 1193d0036e95367fe76bc062d904791e 265 Gene3D G3DSA:3.40.50.300 28 264 1.2E-45 T 11-10-2018 ABE28_022540 1193d0036e95367fe76bc062d904791e 265 SMART SM00382 49 235 6.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022540 1193d0036e95367fe76bc062d904791e 265 SUPERFAMILY SSF52540 31 235 5.59E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022540 1193d0036e95367fe76bc062d904791e 265 Pfam PF00005 ABC transporter 40 171 5.1E-17 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 Gene3D G3DSA:3.30.70.1560 126 199 5.4E-54 T 11-10-2018 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 Pfam PF00849 RNA pseudouridylate synthase 61 187 2.2E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 96 110 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 218 3.1E-48 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 Gene3D G3DSA:3.30.70.580 62 221 5.4E-54 T 11-10-2018 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 SMART SM00363 1 59 4.3E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 Pfam PF01479 S4 domain 2 46 1.6E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 SUPERFAMILY SSF55120 60 221 3.04E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 SUPERFAMILY SSF55174 1 55 2.02E-12 T 11-10-2018 ABE28_002265 5e0a7342b9ce3dc19c44f45658a4f7cc 235 Gene3D G3DSA:3.10.290.10 1 54 7.4E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 70 186 2.5E-39 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 Gene3D G3DSA:3.40.1700.10 61 192 6.0E-49 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 Pfam PF10372 Bacterial membrane-spanning protein N-terminus 1 60 2.4E-19 T 11-10-2018 IPR019457 Uncharacterised domain YojJ, N-terminal ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 PIRSF PIRSF004793 34 194 9.1E-55 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 Hamap MF_00838 Diadenylate cyclase [dacB]. 5 192 33.599 T 11-10-2018 IPR034693 Diadenylate cyclase CdaS GO:0004016|GO:0006171 ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 Gene3D G3DSA:1.10.287.770 1 60 3.4E-10 T 11-10-2018 ABE28_011455 e9cd49fd51dcb096a309bad9199068b2 196 SUPERFAMILY SSF143597 34 189 3.66E-48 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SUPERFAMILY SSF55874 559 739 7.47E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SUPERFAMILY SSF55781 256 417 4.71E-19 T 11-10-2018 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SMART SM00388 502 570 6.7E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Gene3D G3DSA:3.30.450.40 248 420 1.6E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Pfam PF00072 Response regulator receiver domain 791 901 1.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Gene3D G3DSA:3.40.50.12740 788 909 3.8E-40 T 11-10-2018 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Gene3D G3DSA:1.10.287.130 466 568 8.2E-25 T 11-10-2018 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Gene3D G3DSA:1.20.1440.210 50 176 4.8E-23 T 11-10-2018 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SMART SM00387 617 737 5.1E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SMART SM00448 789 903 1.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SUPERFAMILY SSF47384 489 571 6.28E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Pfam PF05227 CHASE3 domain 44 178 5.1E-27 T 11-10-2018 IPR007891 CHASE3 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 617 734 4.2E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Gene3D G3DSA:3.30.565.10 569 740 8.0E-49 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Pfam PF00512 His Kinase A (phospho-acceptor) domain 503 570 6.5E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 SUPERFAMILY SSF52172 788 907 8.54E-37 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 Pfam PF13185 GAF domain 280 417 3.1E-16 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 721 734 3.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 662 676 3.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 697 715 3.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_001625 3ad4e3b010a6044fb2e60a71761cf0a4 909 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 690 3.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.4E-17 T 11-10-2018 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 1.4E-17 T 11-10-2018 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 1.4E-17 T 11-10-2018 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 SUPERFAMILY SSF51905 8 316 9.18E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 1.7E-24 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 Gene3D G3DSA:3.50.50.60 128 247 4.8E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 Gene3D G3DSA:3.50.50.60 7 305 4.8E-116 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 295 5.3E-30 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_021570 6eff89a145298f6d3216d6d56e50c290 330 Hamap MF_01685 Ferredoxin--NADP reductase. 7 329 44.944 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 SUPERFAMILY SSF141523 55 163 1.19E-34 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 SMART SM00257 2 46 9.0E-15 T 11-10-2018 IPR018392 LysM domain ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 Pfam PF01476 LysM domain 3 46 1.2E-11 T 11-10-2018 IPR018392 LysM domain ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 Pfam PF03734 L,D-transpeptidase catalytic domain 56 162 8.5E-19 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 Gene3D G3DSA:2.40.440.10 54 163 2.5E-44 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 SUPERFAMILY SSF54106 2 46 1.22E-10 T 11-10-2018 ABE28_018635 95e7b0c433dc39e642feae4a51677436 164 Gene3D G3DSA:3.10.350.10 1 53 1.2E-14 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 Gene3D G3DSA:3.60.90.10 109 187 7.1E-7 T 11-10-2018 ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 PIRSF PIRSF001356 3 269 7.2E-136 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 276 156.857 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 Pfam PF02675 S-adenosylmethionine decarboxylase 40 175 2.0E-29 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 SUPERFAMILY SSF56276 48 179 7.06E-24 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 ABE28_011915 2fbb55f2183ddf16964bf608b621d885 276 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 8 267 2.1E-137 T 11-10-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_021210 aa1a3532f5e36ab4c09d5f6f17638aac 455 ProSitePatterns PS00218 Amino acid permeases signature. 42 72 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_021210 aa1a3532f5e36ab4c09d5f6f17638aac 455 Gene3D G3DSA:1.20.1740.10 10 455 4.3E-66 T 11-10-2018 ABE28_021210 aa1a3532f5e36ab4c09d5f6f17638aac 455 Pfam PF00324 Amino acid permease 17 445 8.6E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_021210 aa1a3532f5e36ab4c09d5f6f17638aac 455 PIRSF PIRSF006060 1 453 1.3E-75 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_013620 13148c7511c52f31ac09d600c508bbcf 424 Gene3D G3DSA:3.40.50.720 1 127 9.4E-25 T 11-10-2018 ABE28_013620 13148c7511c52f31ac09d600c508bbcf 424 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 127 1.6E-18 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_013620 13148c7511c52f31ac09d600c508bbcf 424 SUPERFAMILY SSF51735 8 157 2.14E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_013620 13148c7511c52f31ac09d600c508bbcf 424 SUPERFAMILY SSF55347 137 354 9.81E-23 T 11-10-2018 ABE28_013620 13148c7511c52f31ac09d600c508bbcf 424 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 225 4.6E-8 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 Gene3D G3DSA:3.90.76.10 64 186 4.8E-177 T 11-10-2018 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 Gene3D G3DSA:3.10.105.10 288 504 4.8E-177 T 11-10-2018 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 SUPERFAMILY SSF53850 26 526 5.79E-140 T 11-10-2018 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 Gene3D G3DSA:3.40.190.10 34 515 4.8E-177 T 11-10-2018 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 PIRSF PIRSF002741 1 532 3.4E-126 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_012330 5dbd86451bc38cb5baf1cfa7a87250e7 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 74 449 2.5E-90 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_008080 17f323c297ce86ddebcc1b0ec256a4f6 167 Pfam PF03975 CheD chemotactic sensory transduction 53 158 5.3E-32 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ABE28_008080 17f323c297ce86ddebcc1b0ec256a4f6 167 Gene3D G3DSA:3.30.1330.200 7 167 1.3E-44 T 11-10-2018 IPR038592 CheD-like superfamily ABE28_008080 17f323c297ce86ddebcc1b0ec256a4f6 167 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 6 163 25.73 T 11-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 ABE28_008080 17f323c297ce86ddebcc1b0ec256a4f6 167 SUPERFAMILY SSF64438 9 164 1.56E-44 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 Gene3D G3DSA:1.10.10.10 177 250 8.4E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 SUPERFAMILY SSF46785 174 249 1.01E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 SUPERFAMILY SSF55811 40 172 8.39E-26 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 ProSitePatterns PS00893 Nudix box signature. 67 88 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 Gene3D G3DSA:3.90.79.10 10 176 1.6E-50 T 11-10-2018 ABE28_011010 4b72e7ba898d7fee02ea62359dba05d9 254 Pfam PF00293 NUDIX domain 40 159 1.2E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 ProSitePatterns PS00501 Signal peptidases I serine active site. 37 44 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 78 90 3.8E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 137 156 3.8E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 28 44 3.8E-20 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 ProSitePatterns PS00761 Signal peptidases I signature 3. 142 155 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 Gene3D G3DSA:2.10.109.10 58 185 1.3E-42 T 11-10-2018 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 Pfam PF00717 Peptidase S24-like 35 102 1.2E-21 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 179 1.8E-53 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 SUPERFAMILY SSF51306 26 184 1.17E-51 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_007860 aa2222b809cd28112bf12af4c4ea83d3 186 ProSitePatterns PS00760 Signal peptidases I lysine active site. 80 92 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ABE28_007980 5360134996ef141cadeaaf4cdbcd3890 211 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 72 1.6E-22 T 11-10-2018 IPR005648 Flagellar hook capping protein ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 Gene3D G3DSA:3.30.565.10 320 477 4.1E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SUPERFAMILY SSF55874 306 472 8.77E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 Gene3D G3DSA:1.10.287.130 255 312 3.2E-13 T 11-10-2018 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SUPERFAMILY SSF47384 234 317 2.55E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 473 8.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 454 8.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 420 430 8.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 416 8.8E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SMART SM00387 364 476 5.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 365 473 5.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 Gene3D G3DSA:1.20.1480.50 158 254 1.8E-10 T 11-10-2018 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SMART SM00388 251 317 8.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SUPERFAMILY SSF158472 195 246 4.71E-5 T 11-10-2018 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 SMART SM00304 195 250 5.1E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_005185 ffdeba00595ae4458fa4040ccba94106 478 Pfam PF00512 His Kinase A (phospho-acceptor) domain 252 316 1.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012535 d90d8c2bd003cc9d22682fb0e4f0f92a 198 Pfam PF01583 Adenylylsulphate kinase 27 180 4.3E-71 T 11-10-2018 ABE28_012535 d90d8c2bd003cc9d22682fb0e4f0f92a 198 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 197 38.683 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012535 d90d8c2bd003cc9d22682fb0e4f0f92a 198 Gene3D G3DSA:3.40.50.300 4 198 7.8E-79 T 11-10-2018 ABE28_012535 d90d8c2bd003cc9d22682fb0e4f0f92a 198 SUPERFAMILY SSF52540 17 195 7.02E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012535 d90d8c2bd003cc9d22682fb0e4f0f92a 198 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 12 193 1.6E-83 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_021810 63dd680f69d659977de9543145680241 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.3E-139 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 SUPERFAMILY SSF53901 269 390 1.01E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_021810 63dd680f69d659977de9543145680241 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 Gene3D G3DSA:3.40.47.10 6 274 1.5E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_021810 63dd680f69d659977de9543145680241 392 PIRSF PIRSF000429 1 392 1.4E-130 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 Pfam PF00108 Thiolase, N-terminal domain 5 259 3.9E-76 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 Gene3D G3DSA:3.40.47.10 128 387 1.5E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_021810 63dd680f69d659977de9543145680241 392 Pfam PF02803 Thiolase, C-terminal domain 269 389 1.2E-47 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_021810 63dd680f69d659977de9543145680241 392 SUPERFAMILY SSF53901 1 263 7.77E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 Gene3D G3DSA:3.40.50.300 1 267 1.9E-76 T 11-10-2018 ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 SMART SM00382 32 223 3.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 SUPERFAMILY SSF52540 1 241 3.01E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 4.0E-121 T 11-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_000730 1c48e3df91affcfcbeeefe7e03134c67 288 Pfam PF00005 ABC transporter 23 174 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_016895 90e9b410360f73440732f6cb654720b8 153 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 1.8E-68 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ABE28_016895 90e9b410360f73440732f6cb654720b8 153 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 153 85.559 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 ABE28_016895 90e9b410360f73440732f6cb654720b8 153 Pfam PF03477 ATP cone domain 50 136 9.9E-20 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 473 5.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 5.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 5.9E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Gene3D G3DSA:1.10.287.130 313 379 1.4E-5 T 11-10-2018 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SUPERFAMILY SSF55890 321 375 8.37E-14 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SUPERFAMILY SSF55874 391 531 3.41E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SMART SM00091 214 279 1.2E-5 T 11-10-2018 IPR000014 PAS domain ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SUPERFAMILY SSF103190 39 170 3.26E-30 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 375 5.1E-13 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Gene3D G3DSA:3.30.450.20 201 312 8.1E-25 T 11-10-2018 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 422 527 7.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SUPERFAMILY SSF55785 218 307 2.09E-9 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Pfam PF13596 PAS domain 220 282 6.1E-6 T 11-10-2018 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 SMART SM00387 418 529 3.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Gene3D G3DSA:3.30.450.20 34 172 1.2E-33 T 11-10-2018 ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Gene3D G3DSA:3.30.565.10 390 536 2.2E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_020780 b12e03bcf032a0bfbd8c116caed8feaa 536 Pfam PF17203 Single cache domain 3 44 170 9.4E-19 T 11-10-2018 IPR033463 Single cache domain 3 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 Gene3D G3DSA:3.40.930.10 1 149 1.1E-44 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 Pfam PF02378 Phosphotransferase system, EIIC 301 561 8.4E-11 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 SUPERFAMILY SSF55804 1 148 1.7E-39 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 5.1E-35 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 Gene3D G3DSA:3.40.50.2300 163 276 4.7E-42 T 11-10-2018 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 177 266 8.5E-19 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 287 624 4.8E-136 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 SUPERFAMILY SSF52794 174 276 2.27E-37 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 133 7.9E-38 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 ABE28_012955 f5b41326484a2224a1db35b4ed87c10e 628 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 177 258 9.5E-31 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.300.30 861 963 1.3E-36 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.300.30 1937 2040 3.3E-38 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.559.10 1059 1431 2.7E-150 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF56801 427 987 9.68E-163 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.40.50.1820 2041 2383 5.8E-116 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SMART SM00823 Phosphopantetheine attachment site 974 1043 9.9E-4 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SMART SM00823 Phosphopantetheine attachment site 2050 2119 5.4E-6 T 11-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1548 1966 1.1E-140 T 11-10-2018 IPR010071 Amino acid adenylation domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 485 890 2.0E-133 T 11-10-2018 IPR010071 Amino acid adenylation domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF53474 2118 2379 1.01E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF52777 191 451 4.89E-40 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF13193 AMP-binding enzyme C-terminal domain 1950 2025 5.5E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF13193 AMP-binding enzyme C-terminal domain 874 949 2.4E-15 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.559.30 1241 1493 2.7E-150 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:1.10.1200.10 964 1044 9.5E-25 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00668 Condensation domain 9 444 2.2E-71 T 11-10-2018 IPR001242 Condensation domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00668 Condensation domain 1057 1508 1.3E-97 T 11-10-2018 IPR001242 Condensation domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00550 Phosphopantetheine attachment site 2053 2115 3.2E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00550 Phosphopantetheine attachment site 977 1038 2.2E-13 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00501 AMP-binding enzyme 1527 1942 4.7E-107 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00501 AMP-binding enzyme 464 866 1.0E-105 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Pfam PF00975 Thioesterase domain 2138 2366 3.2E-31 T 11-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF52777 1246 1512 5.89E-60 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 ProSitePatterns PS00455 Putative AMP-binding domain signature. 614 625 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF47336 967 1039 1.23E-18 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.559.10 10 206 1.0E-55 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.30.559.30 207 432 1.6E-65 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.40.50.12780 452 860 5.6E-135 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 Gene3D G3DSA:3.40.50.12780 1513 1936 1.4E-145 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SMART SM00824 Thioesterase 2140 2377 0.0071 T 11-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF52777 10 183 3.78E-33 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1677 1688 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF56801 1488 2063 3.66E-173 T 11-10-2018 ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF47336 2044 2115 8.24E-20 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_001170 84ee0ce8d258e31bc7a4a9a822fa2ed1 2396 SUPERFAMILY SSF52777 1060 1232 6.89E-50 T 11-10-2018 ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 322 565 1.2E-77 T 11-10-2018 IPR014145 DNA ligase D, polymerase domain ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 Pfam PF01068 ATP dependent DNA ligase domain 15 205 3.9E-31 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 Gene3D G3DSA:3.30.470.30 1 205 1.5E-34 T 11-10-2018 ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 Gene3D G3DSA:3.90.920.30 334 601 5.8E-73 T 11-10-2018 ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 SUPERFAMILY SSF56091 2 205 3.84E-32 T 11-10-2018 ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 13 593 1.1E-162 T 11-10-2018 IPR014143 DNA ligase D ABE28_013010 f1c409e217dc43b0cfbec799d4f9a9ca 613 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 21 29 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 SMART SM00345 20 79 1.6E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 Gene3D G3DSA:3.40.640.10 96 456 8.1E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 SUPERFAMILY SSF46785 11 83 3.95E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 9.0E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 1.6E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 Gene3D G3DSA:1.10.10.10 6 88 2.0E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 Pfam PF00155 Aminotransferase class I and II 117 453 5.7E-12 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_012115 b0b685de9422c504cfab8b705427a2b8 464 SUPERFAMILY SSF53383 99 460 4.68E-68 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 21 87 3.3E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 Gene3D G3DSA:2.40.30.30 190 310 1.9E-42 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 SUPERFAMILY SSF52374 21 181 1.07E-29 T 11-10-2018 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 Gene3D G3DSA:3.40.50.620 6 189 1.0E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 Pfam PF06574 FAD synthetase 19 169 9.8E-48 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 Pfam PF01687 Riboflavin kinase 187 310 6.8E-36 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 SMART SM00904 185 312 3.7E-57 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 SUPERFAMILY SSF82114 176 314 2.83E-44 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 311 2.8E-91 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABE28_008185 a1ad2644af610ae001440950b3fa2f3e 316 PIRSF PIRSF004491 3 316 9.1E-101 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 SUPERFAMILY SSF53092 7 127 1.92E-28 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 1.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 1.7E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 Gene3D G3DSA:3.90.230.10 126 353 2.0E-83 T 11-10-2018 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 Gene3D G3DSA:3.40.350.10 1 125 1.9E-35 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 Pfam PF00557 Metallopeptidase family M24 136 336 1.3E-66 T 11-10-2018 IPR000994 Peptidase M24 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 6 127 1.1E-26 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ABE28_015015 88adabacaf321604a2a3bcf0d31f93ca 353 SUPERFAMILY SSF55920 126 353 5.5E-79 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Pfam PF01645 Conserved region in glutamate synthase 784 1106 8.7E-104 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Pfam PF04898 Glutamate synthase central domain 447 726 1.8E-65 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 SUPERFAMILY SSF56235 21 396 1.06E-72 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Gene3D G3DSA:3.20.20.70 471 1164 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 SUPERFAMILY SSF69336 1210 1485 2.75E-42 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Pfam PF01493 GXGXG motif 1250 1417 2.9E-20 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Pfam PF00310 Glutamine amidotransferases class-II 21 370 5.4E-49 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Gene3D G3DSA:2.160.20.60 1199 1490 7.6E-60 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Gene3D G3DSA:3.60.20.10 21 532 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 Gene3D G3DSA:3.20.20.70 422 773 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_003700 6bcacc06c7d5ad5dc91ca54bcc1b2ced 1490 SUPERFAMILY SSF51395 446 1169 1.83E-161 T 11-10-2018 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.0E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 56 1.6E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 Gene3D G3DSA:1.10.357.10 56 194 3.0E-5 T 11-10-2018 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 SUPERFAMILY SSF46689 4 77 2.05E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018345 7256ee599cd5cb8ebb7737c0cf591273 194 Gene3D G3DSA:1.10.10.60 1 55 4.1E-13 T 11-10-2018 ABE28_016825 300e3b4f9984d0f79d3b0fec5765c7ed 233 Gene3D G3DSA:3.40.50.10420 44 230 1.1E-37 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily ABE28_016825 300e3b4f9984d0f79d3b0fec5765c7ed 233 Hamap MF_02104 Lactate utilization protein C [lutC]. 4 230 44.137 T 11-10-2018 IPR022823 Lactate utilization protein C ABE28_016825 300e3b4f9984d0f79d3b0fec5765c7ed 233 Pfam PF02589 LUD domain 52 230 5.1E-30 T 11-10-2018 IPR003741 LUD domain ABE28_016825 300e3b4f9984d0f79d3b0fec5765c7ed 233 SUPERFAMILY SSF100950 46 231 2.59E-42 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 Gene3D G3DSA:3.20.20.140 58 343 2.6E-152 T 11-10-2018 ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 PIRSF PIRSF001238 1 391 3.2E-165 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 SUPERFAMILY SSF51556 57 347 9.51E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 3 390 9.8E-168 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 Gene3D G3DSA:2.30.40.10 4 390 2.6E-152 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 SUPERFAMILY SSF51338 2 387 1.21E-18 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_008635 2841f3955b60d47d275fa4ae125c50e1 391 Pfam PF01979 Amidohydrolase family 53 376 2.6E-16 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.571 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 SMART SM01086 311 405 2.2E-33 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 SUPERFAMILY SSF57716 11 46 2.85E-11 T 11-10-2018 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 3.6E-51 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 SMART SM00994 10 49 5.4E-23 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Gene3D G3DSA:3.40.50.300 54 309 1.5E-106 T 11-10-2018 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Gene3D G3DSA:3.30.50.30 3 50 1.4E-21 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 2 406 3.9E-214 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Gene3D G3DSA:1.10.8.60 310 417 1.1E-36 T 11-10-2018 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 SMART SM00382 108 269 1.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 SUPERFAMILY SSF52540 60 393 4.09E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Pfam PF06689 ClpX C4-type zinc finger 12 48 5.2E-20 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 ABE28_016500 d3bd6dfb5472912aded47a1c09634c35 422 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 7.2E-18 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_003015 898b039933004f23a0ddef18fdc7c8a1 236 Gene3D G3DSA:1.10.3720.10 2 229 1.3E-42 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003015 898b039933004f23a0ddef18fdc7c8a1 236 SUPERFAMILY SSF161098 14 213 1.02E-34 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003015 898b039933004f23a0ddef18fdc7c8a1 236 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 122 5.1E-18 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_003015 898b039933004f23a0ddef18fdc7c8a1 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 227 2.2E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_008935 a907e180cdfea325a04b363df6f78b74 465 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 21 431 2.8E-77 T 11-10-2018 IPR021145 Portal protein ABE28_008935 a907e180cdfea325a04b363df6f78b74 465 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 18 430 1.0E-67 T 11-10-2018 IPR006428 Portal protein, SPP1-type ABE28_011675 5b9d72dabe4b0c25859faa167eba5c44 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 249 2.5E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_011675 5b9d72dabe4b0c25859faa167eba5c44 269 Gene3D G3DSA:1.10.3720.10 3 261 9.5E-52 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011675 5b9d72dabe4b0c25859faa167eba5c44 269 SUPERFAMILY SSF161098 7 260 7.01E-54 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 6.7E-27 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ABE28_001915 efca10a7687118a73d450b77580949da 740 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 8.4E-26 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ABE28_001915 efca10a7687118a73d450b77580949da 740 SUPERFAMILY SSF55326 18 201 5.08E-53 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 Gene3D G3DSA:3.90.650.10 34 362 1.4E-133 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 578 711 3.2E-13 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ABE28_001915 efca10a7687118a73d450b77580949da 740 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 8.7E-33 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ABE28_001915 efca10a7687118a73d450b77580949da 740 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 740 326.087 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001915 efca10a7687118a73d450b77580949da 740 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 738 0.0 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001915 efca10a7687118a73d450b77580949da 740 PIRSF PIRSF001587 9 740 0.0 T 11-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001915 efca10a7687118a73d450b77580949da 740 Gene3D G3DSA:3.90.650.10 570 740 5.6E-40 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 Gene3D G3DSA:3.30.1330.10 49 198 1.4E-133 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 SUPERFAMILY SSF56042 205 430 6.73E-56 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 SUPERFAMILY SSF55326 404 569 1.26E-58 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 SUPERFAMILY SSF56042 572 739 3.59E-36 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001915 efca10a7687118a73d450b77580949da 740 Gene3D G3DSA:3.30.1330.10 392 564 1.4E-63 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_014685 c9b8e45450843f45fff791ad9810840e 86 Pfam PF13025 Protein of unknown function (DUF3886) 18 84 1.1E-21 T 11-10-2018 IPR024980 Protein of unknown function DUF3886 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 Hamap MF_01396 ATP synthase subunit c [atpH]. 7 72 16.344 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 18 72 6.8E-24 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 30 45 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 9 28 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 PRINTS PR00124 ATP synthase C subunit signature 47 72 1.1E-21 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 Pfam PF00137 ATP synthase subunit C 8 70 3.5E-14 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 ProSitePatterns PS00605 ATP synthase c subunit signature. 37 58 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 SUPERFAMILY SSF81333 4 73 2.35E-20 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily ABE28_022855 f4338bcb4fca53fe53238a1916a96783 74 Gene3D G3DSA:1.20.20.10 4 74 8.0E-30 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 SUPERFAMILY SSF53850 468 575 7.76E-29 T 11-10-2018 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 SUPERFAMILY SSF161098 84 268 1.03E-37 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Gene3D G3DSA:1.10.3720.10 83 273 4.1E-33 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Gene3D G3DSA:3.40.190.230 319 574 1.7E-120 T 11-10-2018 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 SUPERFAMILY SSF53850 317 468 1.45E-47 T 11-10-2018 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Gene3D G3DSA:3.10.105.10 400 556 1.7E-120 T 11-10-2018 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 474 575 2.5E-21 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 313 456 1.5E-42 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ABE28_001725 405b9fcb7d70070cd4b74f4a146a257e 575 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 264 2.0E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 Gene3D G3DSA:1.20.1250.20 263 476 1.7E-20 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 432 6.1E-98 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 SUPERFAMILY SSF103473 17 472 1.48E-56 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 Gene3D G3DSA:1.20.1720.10 18 226 1.6E-34 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 81 103 1.4E-7 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 21 45 1.4E-7 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 1.4E-7 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 PRINTS PR01036 Tetracycline resistance protein TetB signature 306 330 1.4E-7 T 11-10-2018 ABE28_004010 fd9928b5b2ad5b5556c9dce55bd91759 476 Pfam PF07690 Major Facilitator Superfamily 23 413 1.6E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 Gene3D G3DSA:3.40.50.620 1 173 2.0E-66 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 SUPERFAMILY SSF69864 171 397 2.49E-93 T 11-10-2018 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 Gene3D G3DSA:3.90.1260.10 174 401 2.6E-92 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 SUPERFAMILY SSF52402 1 167 7.06E-48 T 11-10-2018 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 393 2.9E-175 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 54.5 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_017090 2fe543e19cb90e076cc2aab218367303 401 Pfam PF00764 Arginosuccinate synthase 7 391 1.4E-179 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_008450 372fb308fff7b4393abd31e5c99b5723 171 Gene3D G3DSA:1.10.10.10 1 148 3.8E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008450 372fb308fff7b4393abd31e5c99b5723 171 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 140 1.4E-29 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_008450 372fb308fff7b4393abd31e5c99b5723 171 SUPERFAMILY SSF46785 2 145 2.25E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008450 372fb308fff7b4393abd31e5c99b5723 171 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_008450 372fb308fff7b4393abd31e5c99b5723 171 Pfam PF02082 Transcriptional regulator 1 83 8.5E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_003190 b5c83025fa9ef1dab7e3120636616536 379 Pfam PF04860 Phage portal protein 38 347 5.4E-45 T 11-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein ABE28_003190 b5c83025fa9ef1dab7e3120636616536 379 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 29 351 3.1E-61 T 11-10-2018 IPR006427 Phage portal protein, HK97 ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 SMART SM00062 41 263 4.3E-58 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 Gene3D G3DSA:3.40.190.10 47 260 4.3E-71 T 11-10-2018 ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 63 76 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 SMART SM00079 41 262 7.7E-6 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 SUPERFAMILY SSF53850 6 262 6.62E-67 T 11-10-2018 ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 Gene3D G3DSA:3.40.190.10 125 223 4.3E-71 T 11-10-2018 ABE28_003530 815bc8d55583aaee4051d7f9199a8b20 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 261 2.1E-59 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Gene3D G3DSA:3.40.1440.10 1 99 8.5E-38 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 377 523 3.3E-53 T 11-10-2018 IPR001162 UvrC family homology region ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Gene3D G3DSA:3.30.420.340 365 523 2.3E-59 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 SMART SM00465 15 95 4.1E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.116 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 SUPERFAMILY SSF47781 503 589 3.5E-21 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 2.2E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 3.6E-208 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 SUPERFAMILY SSF46600 182 235 4.84E-13 T 11-10-2018 IPR036876 UVR domain superfamily ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 SUPERFAMILY SSF82771 14 97 1.96E-21 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Pfam PF02151 UvrB/uvrC motif 198 228 1.7E-8 T 11-10-2018 IPR001943 UVR domain GO:0005515 ABE28_016685 6232d51af53d6d70ef3d37a34fc82edb 590 Gene3D G3DSA:1.10.150.20 527 588 1.4E-21 T 11-10-2018 ABE28_003790 5c91635628ce8b687a1ce3f45c25a2ad 150 SUPERFAMILY SSF53927 2 146 1.84E-37 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_003790 5c91635628ce8b687a1ce3f45c25a2ad 150 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 87 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_003790 5c91635628ce8b687a1ce3f45c25a2ad 150 Gene3D G3DSA:3.40.140.10 1 150 3.7E-47 T 11-10-2018 ABE28_003790 5c91635628ce8b687a1ce3f45c25a2ad 150 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 98 1.2E-20 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 8 640 48.461 T 11-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 570 631 9.9E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 SMART SM00387 35 179 8.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 SUPERFAMILY SSF54211 224 395 4.17E-52 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Pfam PF00204 DNA gyrase B 224 394 1.2E-56 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Pfam PF01751 Toprim domain 425 534 1.6E-16 T 11-10-2018 IPR006171 TOPRIM domain ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Gene3D G3DSA:3.30.565.10 7 222 1.7E-87 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 9 644 0.0 T 11-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 39 54 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 116 130 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 270 283 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 74 87 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 510 527 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 426 440 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 530 542 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 492 508 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR00418 DNA topoisomerase II family signature 574 590 2.2E-69 T 11-10-2018 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Gene3D G3DSA:3.40.50.670 412 644 1.2E-100 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Gene3D G3DSA:3.30.230.10 223 404 8.5E-71 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 SUPERFAMILY SSF55874 9 221 2.75E-69 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 SUPERFAMILY SSF56719 400 636 3.66E-85 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 10 20 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 611 627 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 378 398 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 364 378 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 199 212 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 314 330 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 595 607 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 184 199 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 223 245 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 PRINTS PR01159 DNA gyrase subunit B signature 476 485 4.4E-57 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 178 7.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_010765 6a471099247896259f0f8403d6ae51f0 661 SMART SM00433 39 635 0.0 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 Pfam PF02152 Dihydroneopterin aldolase 4 115 3.6E-36 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 TIGRFAM TIGR00526 folB_dom: FolB domain 2 118 3.0E-37 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 SUPERFAMILY SSF55620 2 119 1.22E-39 T 11-10-2018 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 SMART SM00905 4 117 4.6E-51 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 Gene3D G3DSA:3.30.1130.10 1 119 5.8E-46 T 11-10-2018 ABE28_000385 ae77263f908595165aa345119e98ce4c 119 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 7.9E-42 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.5E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 252 1.9E-70 T 11-10-2018 ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 SUPERFAMILY SSF51735 5 253 2.42E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019125 c5ab92b612e9a258f31f924987aa47a2 254 Gene3D G3DSA:3.40.50.720 1 253 2.2E-86 T 11-10-2018 ABE28_008200 14a676ebb608e1a0a158d7dd5470a3a8 319 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 46 313 2.6E-126 T 11-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY ABE28_008200 14a676ebb608e1a0a158d7dd5470a3a8 319 Gene3D G3DSA:3.20.20.370 82 316 7.2E-58 T 11-10-2018 ABE28_008200 14a676ebb608e1a0a158d7dd5470a3a8 319 SUPERFAMILY SSF88713 107 312 1.15E-58 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_008200 14a676ebb608e1a0a158d7dd5470a3a8 319 Pfam PF01522 Polysaccharide deacetylase 142 247 2.7E-29 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_007895 3961167a8ddc482371002910cb1b7d1d 293 Pfam PF02481 DNA recombination-mediator protein A 72 279 4.3E-77 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ABE28_007895 3961167a8ddc482371002910cb1b7d1d 293 Gene3D G3DSA:3.40.50.450 6 291 6.1E-91 T 11-10-2018 ABE28_007895 3961167a8ddc482371002910cb1b7d1d 293 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 287 6.2E-75 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 ABE28_007895 3961167a8ddc482371002910cb1b7d1d 293 SUPERFAMILY SSF102405 81 287 1.83E-32 T 11-10-2018 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 Gene3D G3DSA:1.10.10.60 1 45 5.1E-17 T 11-10-2018 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 6.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 6.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 48 1.9E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 Gene3D G3DSA:1.10.357.10 46 186 2.5E-29 T 11-10-2018 ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 ProSitePatterns PS01081 TetR-type HTH domain signature. 17 48 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 SUPERFAMILY SSF48498 76 186 8.9E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_006840 7ec84db4760452b2ef3e6a4f71ff6a74 187 SUPERFAMILY SSF46689 2 65 9.48E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_011595 f363cf1fc1b6f150c8dcddb5ddd0447d 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 7.6E-23 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_011595 f363cf1fc1b6f150c8dcddb5ddd0447d 100 Gene3D G3DSA:3.40.50.2300 1 100 1.2E-36 T 11-10-2018 ABE28_011595 f363cf1fc1b6f150c8dcddb5ddd0447d 100 SUPERFAMILY SSF52794 1 99 4.71E-34 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_012325 40ef4232fdf7d5ee293d7b5fb0637c9b 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 5.3E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_012325 40ef4232fdf7d5ee293d7b5fb0637c9b 309 SUPERFAMILY SSF161098 87 291 7.85E-20 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012325 40ef4232fdf7d5ee293d7b5fb0637c9b 309 Gene3D G3DSA:1.10.3720.10 83 302 1.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 7 206 1.5E-84 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 Pfam PF06508 Queuosine biosynthesis protein QueC 6 213 1.2E-86 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 Gene3D G3DSA:3.40.50.620 3 219 5.6E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 PIRSF PIRSF006293 3 217 1.7E-79 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 SUPERFAMILY SSF52402 4 213 2.43E-69 T 11-10-2018 ABE28_017810 0b2b9c291e1cf7ea3277c8d62922a23a 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 5 218 51.101 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 ABE28_014930 addefca1cfe0f7dfbd2deb8e4370131d 297 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 83 99 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABE28_014930 addefca1cfe0f7dfbd2deb8e4370131d 297 Pfam PF00348 Polyprenyl synthetase 33 271 4.5E-61 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABE28_014930 addefca1cfe0f7dfbd2deb8e4370131d 297 SUPERFAMILY SSF48576 9 276 1.24E-87 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_014930 addefca1cfe0f7dfbd2deb8e4370131d 297 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 216 228 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABE28_014930 addefca1cfe0f7dfbd2deb8e4370131d 297 Gene3D G3DSA:1.10.600.10 2 297 1.6E-108 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 Gene3D G3DSA:3.30.110.60 1 96 1.8E-37 T 11-10-2018 IPR035920 YhbY-like superfamily ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 SUPERFAMILY SSF75471 1 95 4.71E-31 T 11-10-2018 IPR035920 YhbY-like superfamily ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 3.4E-21 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 1.4E-41 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 1.0E-38 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABE28_015605 3e40ad95b64f4e623538d82513bfd19e 96 SMART SM01103 2 85 7.5E-40 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 ABE28_005170 760f565d02116095ab1c091b20a29a06 247 Gene3D G3DSA:3.60.21.10 1 246 8.6E-51 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_005170 760f565d02116095ab1c091b20a29a06 247 PIRSF PIRSF000883 1 246 1.8E-41 T 11-10-2018 IPR011152 Phosphoesterase MJ0912 ABE28_005170 760f565d02116095ab1c091b20a29a06 247 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 205 4.1E-23 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ABE28_005170 760f565d02116095ab1c091b20a29a06 247 SUPERFAMILY SSF56300 1 237 1.52E-41 T 11-10-2018 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 Gene3D G3DSA:1.25.40.10 4 296 5.1E-84 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 SUPERFAMILY SSF47413 5 64 1.1E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 Pfam PF13181 Tetratricopeptide repeat 242 267 0.035 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 Pfam PF13181 Tetratricopeptide repeat 202 230 0.017 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 Pfam PF12844 Helix-turn-helix domain 7 65 1.1E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 SUPERFAMILY SSF48452 120 268 9.1E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_022625 24842ca5be85fcdb02f784b461d0e7f4 297 SMART SM00530 9 63 1.9E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 SUPERFAMILY SSF55797 81 205 5.76E-28 T 11-10-2018 IPR035940 CAP superfamily ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 Gene3D G3DSA:3.40.33.10 74 208 1.3E-48 T 11-10-2018 IPR035940 CAP superfamily ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 Pfam PF01476 LysM domain 26 70 6.6E-11 T 11-10-2018 IPR018392 LysM domain ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 Gene3D G3DSA:3.10.350.10 22 70 9.1E-13 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 SUPERFAMILY SSF54106 25 70 2.35E-9 T 11-10-2018 ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 SMART SM00257 25 70 7.0E-15 T 11-10-2018 IPR018392 LysM domain ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 Pfam PF00188 Cysteine-rich secretory protein family 89 205 3.3E-22 T 11-10-2018 IPR014044 CAP domain ABE28_012405 f4f5494ea7f0dfe01b33ecd538debe29 208 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 84 207 1.5E-57 T 11-10-2018 IPR014258 CAP domain, YkwD-like ABE28_019085 630a5d6a0db2777d7d904c1f5abf3fc2 205 Gene3D G3DSA:1.20.144.10 72 203 3.2E-21 T 11-10-2018 ABE28_019085 630a5d6a0db2777d7d904c1f5abf3fc2 205 Pfam PF01569 PAP2 superfamily 75 171 1.5E-15 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_019085 630a5d6a0db2777d7d904c1f5abf3fc2 205 SMART SM00014 62 166 3.2E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_019085 630a5d6a0db2777d7d904c1f5abf3fc2 205 SUPERFAMILY SSF48317 6 175 2.35E-33 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_022060 59d66c93865e2c3bb4a7a07735fb4a35 117 Pfam PF06304 Protein of unknown function (DUF1048) 7 106 2.4E-42 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 ABE28_022060 59d66c93865e2c3bb4a7a07735fb4a35 117 SUPERFAMILY SSF158560 1 107 1.83E-36 T 11-10-2018 ABE28_022060 59d66c93865e2c3bb4a7a07735fb4a35 117 Gene3D G3DSA:1.10.1900.10 1 109 1.1E-39 T 11-10-2018 ABE28_022060 59d66c93865e2c3bb4a7a07735fb4a35 117 PIRSF PIRSF029876 3 111 7.6E-45 T 11-10-2018 IPR008316 Uncharacterised conserved protein UCP029876 ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 256 2.7E-59 T 11-10-2018 ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 SUPERFAMILY SSF51735 6 257 7.06E-75 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 Gene3D G3DSA:3.40.50.720 1 259 3.8E-74 T 11-10-2018 ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 9.8E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006410 1d43c1776810818c198f57c23a8c82cc 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.6E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.2E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.2E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.2E-11 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 SUPERFAMILY SSF50249 7 84 8.57E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 1.6E-34 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 23.658 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 Gene3D G3DSA:2.40.50.140 6 86 8.3E-35 T 11-10-2018 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 8.0E-25 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000630 359965f59ec0773cbd4cf571770b60cb 87 Pfam PF00366 Ribosomal protein S17 12 79 2.3E-31 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_011765 df6766009d2ede54f134c1892f6828b3 115 SUPERFAMILY SSF46785 9 102 1.36E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011765 df6766009d2ede54f134c1892f6828b3 115 Gene3D G3DSA:1.10.10.10 1 114 2.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011765 df6766009d2ede54f134c1892f6828b3 115 Pfam PF03551 Transcriptional regulator PadR-like family 19 87 4.1E-17 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_012300 1c2643825d896d05d3987f2c6945f1ba 285 SUPERFAMILY SSF52096 3 261 1.07E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_012300 1c2643825d896d05d3987f2c6945f1ba 285 Gene3D G3DSA:1.10.12.10 226 261 4.4E-7 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_012300 1c2643825d896d05d3987f2c6945f1ba 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 4.2E-55 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_012300 1c2643825d896d05d3987f2c6945f1ba 285 Gene3D G3DSA:3.90.226.10 2 222 2.9E-67 T 11-10-2018 ABE28_023125 f0db375dcf386182507412a82363befb 85 Pfam PF17261 Family of unknown function (DUF5327) 2 85 3.3E-11 T 11-10-2018 IPR035218 Protein of unknown function DUF5327 ABE28_023125 f0db375dcf386182507412a82363befb 85 ProDom PD705231 YWDI GROUP-SPECIFIC 1 85 1.0E-6 T 11-10-2018 IPR035218 Protein of unknown function DUF5327 ABE28_016515 fde315e65743837a8b91a72443539182 197 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 9.4E-78 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ABE28_016515 fde315e65743837a8b91a72443539182 197 Gene3D G3DSA:3.20.19.10 1 174 2.7E-70 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABE28_016515 fde315e65743837a8b91a72443539182 197 Pfam PF00694 Aconitase C-terminal domain 2 121 1.8E-33 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABE28_016515 fde315e65743837a8b91a72443539182 197 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 39.432 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 ABE28_016515 fde315e65743837a8b91a72443539182 197 SUPERFAMILY SSF52016 1 191 4.51E-59 T 11-10-2018 ABE28_010555 221b6197a4066cc58daab308d0c75b35 252 Pfam PF03746 LamB/YcsF family 4 242 1.2E-102 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ABE28_010555 221b6197a4066cc58daab308d0c75b35 252 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 45.7 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ABE28_010555 221b6197a4066cc58daab308d0c75b35 252 SUPERFAMILY SSF88713 4 251 1.11E-98 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_010555 221b6197a4066cc58daab308d0c75b35 252 Gene3D G3DSA:3.20.20.370 3 252 1.8E-102 T 11-10-2018 ABE28_010960 43f0a9ff9a13177e4a0ba116ef347cfb 348 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 333 3.2E-34 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 SUPERFAMILY SSF53822 60 334 1.73E-78 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 Gene3D G3DSA:1.10.260.40 2 59 5.2E-23 T 11-10-2018 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 9.1E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 Gene3D G3DSA:3.40.50.2300 60 154 1.2E-20 T 11-10-2018 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 Pfam PF13377 Periplasmic binding protein-like domain 173 333 8.0E-40 T 11-10-2018 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.5E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.5E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 Gene3D G3DSA:3.40.50.2300 158 336 2.2E-55 T 11-10-2018 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 SUPERFAMILY SSF47413 2 59 1.04E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_011625 7c6e865afa311df3bb3d5038e7c4e5bd 338 SMART SM00354 1 71 5.8E-30 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_009130 1270e3a8d92fd39d90284a891eb01864 242 Pfam PF01695 IstB-like ATP binding protein 87 212 5.6E-15 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ABE28_009130 1270e3a8d92fd39d90284a891eb01864 242 SUPERFAMILY SSF52540 53 215 7.54E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_009130 1270e3a8d92fd39d90284a891eb01864 242 Gene3D G3DSA:3.40.50.300 39 224 1.8E-40 T 11-10-2018 ABE28_004865 65928554c91d0bd0f73696ddb0a9ce3a 80 Pfam PF14148 YhdB-like protein 1 70 2.2E-35 T 11-10-2018 IPR025431 YhdB-like protein ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 SUPERFAMILY SSF55608 120 221 5.53E-20 T 11-10-2018 IPR027434 Homing endonuclease ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Pfam PF02650 WhiA C-terminal HTH domain 220 304 1.2E-33 T 11-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Gene3D G3DSA:1.10.10.10 215 309 1.2E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Gene3D G3DSA:3.10.28.10 1 214 2.0E-67 T 11-10-2018 IPR027434 Homing endonuclease ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 1.1E-129 T 11-10-2018 IPR033981 Sporulation regulator WhiA-like ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 19 103 1.9E-35 T 11-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 6.0E-37 T 11-10-2018 IPR039518 WhiA, LAGLIDADG-like domain ABE28_022180 cb5db081575bac65569f9e42b47ee102 317 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.655 T 11-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 Gene3D G3DSA:1.20.120.530 74 217 8.6E-22 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 SUPERFAMILY SSF46785 9 89 3.63E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 SMART SM00345 17 75 1.2E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 SUPERFAMILY SSF48008 81 215 2.41E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 SMART SM00895 85 206 1.6E-14 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 Gene3D G3DSA:1.10.10.10 9 73 4.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 Pfam PF07729 FCD domain 85 205 2.9E-15 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_011810 82395e5cbbd15dc0756568af41271d99 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 8.9E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 SUPERFAMILY SSF52540 338 534 1.93E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:3.40.50.300 410 535 3.5E-27 T 11-10-2018 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 SUPERFAMILY SSF52540 10 300 2.24E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:1.10.8.280 680 794 5.0E-13 T 11-10-2018 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 SMART SM00382 20 294 0.21 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 SMART SM00382 343 538 0.0095 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:3.40.50.300 331 406 2.9E-9 T 11-10-2018 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Pfam PF00005 ABC transporter 339 488 2.6E-7 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:1.20.1580.10 656 838 5.0E-13 T 11-10-2018 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:1.20.1580.10 120 150 2.2E-49 T 11-10-2018 ABE28_018860 6e5d64f561b25788262e9ddccb85f608 1056 Gene3D G3DSA:3.40.50.300 8 306 2.2E-49 T 11-10-2018 ABE28_017240 8a75acbae56a38340e55f14ec1592612 564 Pfam PF06160 Septation ring formation regulator, EzrA 3 556 4.9E-170 T 11-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 ABE28_017240 8a75acbae56a38340e55f14ec1592612 564 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 562 21.363 T 11-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 Gene3D G3DSA:3.90.1150.10 10 421 9.9E-182 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 103.853 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 Gene3D G3DSA:3.40.640.10 72 319 9.9E-182 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 7 426 1.5E-199 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 Pfam PF00202 Aminotransferase class-III 34 398 1.8E-74 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 SUPERFAMILY SSF53383 4 426 7.97E-130 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016445 0a9c13c26eea2d702e7114837df75bdb 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 SUPERFAMILY SSF63862 137 216 1.07E-13 T 11-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 154 210 5.6E-18 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 Gene3D G3DSA:3.40.50.10240 1 217 1.6E-74 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 5 213 1.0E-58 T 11-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 20 118 2.9E-19 T 11-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 SMART SM00983 145 211 3.4E-23 T 11-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_007735 9342ecac0f9736c1a1aa8fd8030142f2 217 SUPERFAMILY SSF63999 3 122 1.57E-31 T 11-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SUPERFAMILY SSF52540 367 614 2.04E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Gene3D G3DSA:3.40.50.300 355 539 1.2E-60 T 11-10-2018 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SUPERFAMILY SSF55785 118 214 1.48E-16 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 668 687 9.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 651 668 9.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SUPERFAMILY SSF46689 582 687 1.3E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Gene3D G3DSA:1.10.8.60 540 607 1.0E-21 T 11-10-2018 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Gene3D G3DSA:1.10.10.60 610 687 1.1E-13 T 11-10-2018 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 582 591 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Gene3D G3DSA:3.30.450.20 223 339 6.5E-18 T 11-10-2018 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Gene3D G3DSA:3.30.450.20 109 219 4.3E-17 T 11-10-2018 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SUPERFAMILY SSF51735 1 82 2.5E-9 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Pfam PF00989 PAS fold 118 216 6.3E-13 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Pfam PF00989 PAS fold 237 339 2.5E-14 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SMART SM00382 388 532 3.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SMART SM00091 236 304 2.7E-7 T 11-10-2018 IPR000014 PAS domain ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SMART SM00091 117 183 3.3E-10 T 11-10-2018 IPR000014 PAS domain ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 121 176 9.6E-6 T 11-10-2018 IPR000014 PAS domain ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 349 8.2E-17 T 11-10-2018 IPR000014 PAS domain ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Pfam PF00158 Sigma-54 interaction domain 368 535 1.5E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 392 405 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 Pfam PF02954 Bacterial regulatory protein, Fis family 646 685 4.7E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_014880 cd506bfc774e8f51487fb9a6f50a3afb 687 SUPERFAMILY SSF55785 228 336 1.17E-16 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 59 4.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 SUPERFAMILY SSF46785 3 109 6.13E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 Gene3D G3DSA:1.10.10.10 1 89 1.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 27 37 9.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 48 9.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 16 27 9.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 Gene3D G3DSA:3.40.190.290 90 291 2.2E-41 T 11-10-2018 ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 Pfam PF03466 LysR substrate binding domain 87 285 1.4E-43 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_011905 9592f24445734deacefb157f9acdf0fd 294 SUPERFAMILY SSF53850 87 288 2.05E-40 T 11-10-2018 ABE28_016030 55c695d7497cc8422190f0d2387630c2 210 Pfam PF02397 Bacterial sugar transferase 8 182 3.2E-65 T 11-10-2018 IPR003362 Bacterial sugar transferase ABE28_007215 3283de78a90023f0f379804aea9e65ed 204 Gene3D G3DSA:3.20.20.70 1 198 3.0E-64 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007215 3283de78a90023f0f379804aea9e65ed 204 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 199 35.097 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABE28_007215 3283de78a90023f0f379804aea9e65ed 204 SUPERFAMILY SSF51366 1 197 8.32E-51 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_007215 3283de78a90023f0f379804aea9e65ed 204 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 3 194 2.9E-50 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 ABE28_019715 dd016bee0c5a46dd0f85a39248929724 155 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 63 141 6.0E-34 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_019715 dd016bee0c5a46dd0f85a39248929724 155 Pfam PF09671 Spore coat protein (Spore_GerQ) 63 138 8.0E-38 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_019715 dd016bee0c5a46dd0f85a39248929724 155 PIRSF PIRSF038931 3 150 1.1E-39 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 Gene3D G3DSA:3.40.190.10 41 259 2.8E-66 T 11-10-2018 ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 SMART SM00062 42 267 3.5E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 SMART SM00079 42 266 7.6E-5 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 67 80 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 265 2.1E-60 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 SUPERFAMILY SSF53850 5 267 3.14E-68 T 11-10-2018 ABE28_014830 a791e0c4c0a81d827d84d196a7b5246f 270 Gene3D G3DSA:3.40.190.10 132 226 2.8E-66 T 11-10-2018 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.135 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 84 1.9E-42 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 5.4E-99 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 Pfam PF00303 Thymidylate synthase 2 264 1.4E-129 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 3.8E-51 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 SUPERFAMILY SSF55831 1 264 3.01E-133 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_013370 7409042dcece71dc92771c97411f49ec 264 Gene3D G3DSA:3.30.572.10 1 264 7.9E-136 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 ABE28_018835 67ec3d51496ca3891d1bfc4cde6da0dd 257 Gene3D G3DSA:3.40.50.1820 6 256 1.1E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_018835 67ec3d51496ca3891d1bfc4cde6da0dd 257 SUPERFAMILY SSF53474 11 253 1.59E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_018835 67ec3d51496ca3891d1bfc4cde6da0dd 257 Pfam PF00756 Putative esterase 11 250 6.9E-29 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 Gene3D G3DSA:3.40.140.10 116 262 6.5E-46 T 11-10-2018 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 SUPERFAMILY SSF53927 7 261 6.62E-74 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 Gene3D G3DSA:3.10.20.10 28 110 6.9E-13 T 11-10-2018 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 22 261 9.8E-71 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 PIRSF PIRSF015626 2 262 1.7E-73 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 2 262 30.92 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABE28_002895 f8ee5ddd9960d2025c8a67c5a07de810 262 Pfam PF02634 FdhD/NarQ family 26 261 8.2E-76 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 Gene3D G3DSA:1.10.10.10 1 100 2.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 118 183 4.2E-21 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 2.6E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 SMART SM00418 8 89 2.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_012930 f28508f1a0f05d18c947ce5bb535d9f9 194 SUPERFAMILY SSF46785 2 98 3.29E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.6E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 Gene3D G3DSA:1.10.10.10 1 100 2.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 118 183 4.2E-21 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 2.6E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 SMART SM00418 8 89 2.0E-11 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_023955 f28508f1a0f05d18c947ce5bb535d9f9 194 SUPERFAMILY SSF46785 2 98 3.29E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015970 c6a6b7bf9dfc9aa315c7b5d533d7ba0c 420 Gene3D G3DSA:2.160.20.10 55 417 1.2E-29 T 11-10-2018 IPR012334 Pectin lyase fold ABE28_015970 c6a6b7bf9dfc9aa315c7b5d533d7ba0c 420 Pfam PF12708 Pectate lyase superfamily protein 55 266 1.8E-11 T 11-10-2018 IPR024535 Pectate lyase superfamily protein ABE28_015970 c6a6b7bf9dfc9aa315c7b5d533d7ba0c 420 SUPERFAMILY SSF51126 52 359 1.45E-20 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 Pfam PF01926 50S ribosome-binding GTPase 18 132 1.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 Pfam PF07650 KH domain 215 293 1.0E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 Gene3D G3DSA:3.40.50.300 11 192 1.9E-50 T 11-10-2018 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 175 1.0E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 SUPERFAMILY SSF54814 189 305 9.48E-43 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 Gene3D G3DSA:3.30.300.20 193 306 4.6E-44 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 18 38 5.1E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 94 109 5.1E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 TIGRFAM TIGR00436 era: GTP-binding protein Era 16 287 4.2E-113 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 SUPERFAMILY SSF52540 18 213 2.02E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015410 203f2c6808715fdec0935c45579ed5ba 309 Hamap MF_00367 GTPase Era [era]. 13 304 39.212 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_014495 3135cae9ab5f41f75e0b2e52132a3222 176 SUPERFAMILY SSF52833 11 173 5.97E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_014495 3135cae9ab5f41f75e0b2e52132a3222 176 Pfam PF00578 AhpC/TSA family 41 155 5.9E-32 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_014495 3135cae9ab5f41f75e0b2e52132a3222 176 Gene3D G3DSA:3.40.30.10 27 175 5.7E-45 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Pfam PF13671 AAA domain 10 164 2.4E-20 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Gene3D G3DSA:3.30.470.30 460 659 1.5E-52 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Gene3D G3DSA:3.30.470.30 662 863 4.1E-74 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 SUPERFAMILY SSF56300 194 441 2.85E-28 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Pfam PF16542 PNKP adenylyltransferase domain, ligase domain 487 800 3.4E-115 T 11-10-2018 IPR032380 Polynucleotide kinase-phosphatase, ligase domain ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 SUPERFAMILY SSF52540 10 161 2.08E-14 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Gene3D G3DSA:3.40.50.300 1 187 6.7E-36 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 TIGRFAM TIGR04075 bacter_Pnkp: polynucleotide kinase-phosphatase 1 863 1.0E-243 T 11-10-2018 IPR024028 Polynucleotide kinase-phosphatase, bacterial ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Gene3D G3DSA:3.60.21.10 192 449 1.3E-52 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 SUPERFAMILY SSF56091 530 768 2.3E-9 T 11-10-2018 ABE28_018330 5b429ca1a5130a37985c0013e5921d73 863 Pfam PF16536 PNKP adenylyltransferase domain, C-terminal region 804 863 4.0E-29 T 11-10-2018 IPR032390 Polynucleotide kinase-phosphatase, C-terminal ABE28_019070 d8351c0405747fe93a49891f63581d16 180 SUPERFAMILY SSF46689 3 66 1.54E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_019070 d8351c0405747fe93a49891f63581d16 180 ProSitePatterns PS01081 TetR-type HTH domain signature. 12 42 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_019070 d8351c0405747fe93a49891f63581d16 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 2 42 2.8E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_019070 d8351c0405747fe93a49891f63581d16 180 Gene3D G3DSA:1.10.357.10 1 179 6.1E-45 T 11-10-2018 ABE28_019070 d8351c0405747fe93a49891f63581d16 180 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 47 178 7.4E-40 T 11-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 SUPERFAMILY SSF52540 1229 1392 1.23E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 SUPERFAMILY SSF52540 632 891 8.5E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 205 1481 0.0 T 11-10-2018 IPR023839 Firmicutes EssC, C-terminal ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 SUPERFAMILY SSF52540 988 1178 1.59E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Gene3D G3DSA:3.40.50.300 1252 1483 7.6E-23 T 11-10-2018 ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Pfam PF12538 DNA transporter 4 116 1.2E-18 T 11-10-2018 IPR022206 Firmicutes EssC, N-terminal ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Gene3D G3DSA:3.40.50.300 958 1243 3.0E-66 T 11-10-2018 ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Pfam PF01580 FtsK/SpoIIIE family 979 1158 3.3E-19 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Pfam PF01580 FtsK/SpoIIIE family 641 855 5.4E-32 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABE28_001755 fb855e08d84f6c141137df4f32c33283 1493 Gene3D G3DSA:3.40.50.300 616 957 2.4E-81 T 11-10-2018 ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 Gene3D G3DSA:3.40.50.720 1 254 1.8E-69 T 11-10-2018 ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 SUPERFAMILY SSF51735 4 250 2.1E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 9.2E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 Pfam PF00106 short chain dehydrogenase 7 204 2.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003565 991a1b2b51bfb033e3c5b64bb804f956 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 2.0E-28 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_015825 dc9a700c25925b522fc81e3ce950d882 230 SUPERFAMILY SSF52540 3 218 3.62E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015825 dc9a700c25925b522fc81e3ce950d882 230 SMART SM00382 27 203 3.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_015825 dc9a700c25925b522fc81e3ce950d882 230 Gene3D G3DSA:3.40.50.300 1 225 2.1E-49 T 11-10-2018 ABE28_015825 dc9a700c25925b522fc81e3ce950d882 230 Pfam PF00005 ABC transporter 18 153 8.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 Gene3D G3DSA:3.30.479.10 103 156 4.5E-10 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 Gene3D G3DSA:3.30.479.10 30 102 6.2E-22 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 PIRSF PIRSF006113 27 152 7.6E-27 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 32 152 1.1E-36 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 SUPERFAMILY SSF55620 28 152 3.89E-38 T 11-10-2018 ABE28_017805 69dc74fdbcc0168df9c5f22bb34426c2 157 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 32 121 2.2E-30 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 Gene3D G3DSA:1.10.3470.10 7 335 1.0E-90 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.0E-5 T 11-10-2018 ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.0E-5 T 11-10-2018 ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.0E-5 T 11-10-2018 ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 SUPERFAMILY SSF81345 7 334 6.15E-78 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_004585 ab32ee3a70ae164dc915b61a5e0493ff 335 Pfam PF01032 FecCD transport family 20 334 1.1E-87 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_020535 9ace1235accdc3e11d8efc2135de2a57 288 Gene3D G3DSA:3.40.50.300 37 207 3.9E-34 T 11-10-2018 ABE28_020535 9ace1235accdc3e11d8efc2135de2a57 288 SMART SM00382 49 198 5.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020535 9ace1235accdc3e11d8efc2135de2a57 288 SUPERFAMILY SSF52540 34 282 2.55E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020535 9ace1235accdc3e11d8efc2135de2a57 288 Pfam PF07728 AAA domain (dynein-related subfamily) 52 189 1.8E-24 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 ABE28_007340 c3c7d2396d56a329e63b3f79d9b51f61 120 Pfam PF08868 YugN-like family 8 102 4.6E-12 T 11-10-2018 IPR014967 Uncharacterised protein family, YugN-like ABE28_007340 c3c7d2396d56a329e63b3f79d9b51f61 120 SUPERFAMILY SSF160755 2 114 3.53E-38 T 11-10-2018 IPR036491 YugN-like superfamily ABE28_007340 c3c7d2396d56a329e63b3f79d9b51f61 120 Gene3D G3DSA:3.30.310.100 1 119 4.8E-44 T 11-10-2018 IPR036491 YugN-like superfamily ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 2.0E-11 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 Gene3D G3DSA:1.10.8.60 8 237 2.5E-107 T 11-10-2018 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 9.8E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 9.8E-6 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 Gene3D G3DSA:1.20.272.10 242 359 6.4E-10 T 11-10-2018 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 1.3E-144 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 SUPERFAMILY SSF48019 244 363 2.98E-26 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.0E-45 T 11-10-2018 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 SMART SM00382 37 179 1.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 Gene3D G3DSA:3.40.50.300 13 177 2.5E-107 T 11-10-2018 ABE28_000065 9b67bfb4db2d7401cd023b066af981a8 562 SUPERFAMILY SSF52540 31 224 1.54E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 5 643 0.0 T 11-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 1.8E-143 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 SUPERFAMILY SSF81442 44 554 2.75E-173 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 3.9E-97 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019730 3b1dfec8dcdeba0a199b1a5f697ab812 649 Gene3D G3DSA:1.20.210.10 30 561 3.4E-195 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_022215 983932514f263ea0211502098ee9523d 218 SUPERFAMILY SSF101386 120 208 2.43E-26 T 11-10-2018 ABE28_022215 983932514f263ea0211502098ee9523d 218 SUPERFAMILY SSF141734 3 108 4.05E-46 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABE28_022215 983932514f263ea0211502098ee9523d 218 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 122 207 5.6E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 ABE28_022215 983932514f263ea0211502098ee9523d 218 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 118 204 20.54 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABE28_022215 983932514f263ea0211502098ee9523d 218 Gene3D G3DSA:3.10.20.400 1 92 2.8E-38 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 ABE28_022215 983932514f263ea0211502098ee9523d 218 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 2 105 29.287 T 11-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABE28_022215 983932514f263ea0211502098ee9523d 218 Gene3D G3DSA:1.10.287.1080 118 210 2.5E-33 T 11-10-2018 ABE28_022215 983932514f263ea0211502098ee9523d 218 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 29 100 1.7E-33 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABE28_022215 983932514f263ea0211502098ee9523d 218 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 4 209 37.748 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 ABE28_022215 983932514f263ea0211502098ee9523d 218 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 121 204 1.0E-32 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 ABE28_022215 983932514f263ea0211502098ee9523d 218 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 51 100 7.0E-14 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 ABE28_023160 eb8ded16009ace3a1958ee3c206c48aa 211 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 194 22.279 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 ABE28_023160 eb8ded16009ace3a1958ee3c206c48aa 211 SUPERFAMILY SSF53448 6 191 6.31E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_023160 eb8ded16009ace3a1958ee3c206c48aa 211 Gene3D G3DSA:3.90.550.10 1 200 3.9E-50 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_023160 eb8ded16009ace3a1958ee3c206c48aa 211 Pfam PF12804 MobA-like NTP transferase domain 6 149 1.2E-28 T 11-10-2018 IPR025877 MobA-like NTP transferase ABE28_009840 934288a320496caed29f92feb4895127 226 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 4 204 7.1E-39 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABE28_009840 934288a320496caed29f92feb4895127 226 SUPERFAMILY SSF51569 1 218 6.91E-56 T 11-10-2018 ABE28_009840 934288a320496caed29f92feb4895127 226 Gene3D G3DSA:3.20.20.70 1 222 5.4E-63 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 Gene3D G3DSA:3.40.605.10 38 463 2.1E-144 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 Gene3D G3DSA:3.40.309.10 240 443 2.1E-144 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 PIRSF PIRSF036492 12 508 1.1E-118 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 Pfam PF00171 Aldehyde dehydrogenase family 5 462 1.5E-131 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 236 243 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_006790 4aab6c34766af1d39283be0e6a90b07a 520 SUPERFAMILY SSF53720 7 465 9.69E-136 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Gene3D G3DSA:1.10.8.10 156 202 1.9E-9 T 11-10-2018 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 29.658 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Pfam PF01330 RuvA N terminal domain 2 61 1.7E-17 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 SUPERFAMILY SSF50249 1 62 1.48E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 3 202 1.1E-61 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Pfam PF07499 RuvA, C-terminal domain 160 202 1.2E-14 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 SUPERFAMILY SSF46929 159 202 3.4E-11 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 SMART SM00278 72 91 0.8 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 SMART SM00278 107 126 3.7 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 SUPERFAMILY SSF47781 65 136 8.53E-21 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Gene3D G3DSA:1.10.150.20 66 140 5.8E-25 T 11-10-2018 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Pfam PF14520 Helix-hairpin-helix domain 71 128 3.0E-14 T 11-10-2018 ABE28_016225 6dea7786758c954cccbead57b6e230a2 204 Gene3D G3DSA:2.40.50.140 1 64 1.2E-16 T 11-10-2018 ABE28_010060 88c69a515d14234d5028a155841eef54 381 SUPERFAMILY SSF56300 1 317 2.43E-56 T 11-10-2018 ABE28_010060 88c69a515d14234d5028a155841eef54 381 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 264 355 3.0E-14 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain ABE28_010060 88c69a515d14234d5028a155841eef54 381 Gene3D G3DSA:3.60.21.10 1 258 5.5E-78 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_010060 88c69a515d14234d5028a155841eef54 381 Pfam PF00149 Calcineurin-like phosphoesterase 1 213 9.3E-18 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_010060 88c69a515d14234d5028a155841eef54 381 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 240 1.1E-49 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 ABE28_018355 94479cbf576fb790460f09d46de33d33 152 Gene3D G3DSA:3.10.180.10 1 143 9.4E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018355 94479cbf576fb790460f09d46de33d33 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 127 1.0E-6 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_018355 94479cbf576fb790460f09d46de33d33 152 SUPERFAMILY SSF54593 1 132 6.74E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 Gene3D G3DSA:3.40.190.290 82 283 1.4E-68 T 11-10-2018 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 SUPERFAMILY SSF46785 2 110 5.33E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.8E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 SUPERFAMILY SSF53850 89 281 2.04E-25 T 11-10-2018 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 9.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 Gene3D G3DSA:1.10.10.10 1 81 2.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004165 8fdc4f475e741e65483b75f6931d9696 290 Pfam PF03466 LysR substrate binding domain 89 281 6.7E-28 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SUPERFAMILY SSF54001 221 343 3.92E-36 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Gene3D G3DSA:3.10.350.10 157 210 4.8E-19 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Gene3D G3DSA:3.10.350.10 85 140 1.8E-18 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Gene3D G3DSA:3.10.350.10 24 76 6.2E-18 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Gene3D G3DSA:3.90.1720.10 221 345 6.2E-38 T 11-10-2018 ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SUPERFAMILY SSF54106 88 131 1.44E-10 T 11-10-2018 ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Pfam PF00877 NlpC/P60 family 239 341 1.4E-27 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SUPERFAMILY SSF54106 26 67 4.97E-11 T 11-10-2018 ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SMART SM00257 26 69 7.5E-17 T 11-10-2018 IPR018392 LysM domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SMART SM00257 89 132 9.7E-16 T 11-10-2018 IPR018392 LysM domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SMART SM00257 160 203 5.6E-17 T 11-10-2018 IPR018392 LysM domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 SUPERFAMILY SSF54106 160 202 3.01E-11 T 11-10-2018 ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Pfam PF01476 LysM domain 90 131 2.0E-13 T 11-10-2018 IPR018392 LysM domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Pfam PF01476 LysM domain 161 202 7.7E-14 T 11-10-2018 IPR018392 LysM domain ABE28_022570 ad284cf06e82a1e5d5e2d777c821eb76 345 Pfam PF01476 LysM domain 27 66 5.4E-15 T 11-10-2018 IPR018392 LysM domain ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 SUPERFAMILY SSF47413 2 67 4.79E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 Gene3D G3DSA:1.10.260.40 1 99 4.7E-24 T 11-10-2018 ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 SUPERFAMILY SSF47406 70 96 2.49E-7 T 11-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 SMART SM00530 5 61 1.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 Pfam PF08671 Anti-repressor SinI 70 96 1.1E-7 T 11-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 ABE28_016060 9317f6349a80006a1588a89e2ab63c91 99 Pfam PF01381 Helix-turn-helix 6 60 1.9E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 Gene3D G3DSA:3.40.50.2000 178 340 4.5E-39 T 11-10-2018 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 191 346 7.4E-27 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 Gene3D G3DSA:3.40.50.2000 2 177 9.5E-54 T 11-10-2018 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 6 356 27.204 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 SUPERFAMILY SSF53756 4 348 4.35E-86 T 11-10-2018 ABE28_013065 70c05efde13673a99a62b19b56c93557 360 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 6 145 9.0E-38 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 20 33 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 179 299 3.1E-36 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 SUPERFAMILY SSF48179 177 299 6.8E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 PIRSF PIRSF000103 12 300 1.3E-74 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 SUPERFAMILY SSF51735 18 177 4.53E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 18 175 2.3E-50 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 Gene3D G3DSA:1.10.1040.10 177 300 5.5E-40 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_006995 8cedf77e01f0b67a8445f04f16ae7a40 300 Gene3D G3DSA:3.40.50.720 10 176 1.2E-53 T 11-10-2018 ABE28_009820 ac83ff966abe3558de3f222abf23b636 477 SUPERFAMILY SSF53720 5 476 5.76E-147 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_009820 ac83ff966abe3558de3f222abf23b636 477 Gene3D G3DSA:3.40.605.10 23 472 3.2E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_009820 ac83ff966abe3558de3f222abf23b636 477 Gene3D G3DSA:3.40.309.10 256 443 3.2E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_009820 ac83ff966abe3558de3f222abf23b636 477 Pfam PF00171 Aldehyde dehydrogenase family 20 471 3.6E-159 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_002520 22ed586f89ec66b1fb3b250a332f1917 477 Pfam PF00171 Aldehyde dehydrogenase family 22 472 7.9E-153 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_002520 22ed586f89ec66b1fb3b250a332f1917 477 Gene3D G3DSA:3.40.309.10 254 443 1.1E-150 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_002520 22ed586f89ec66b1fb3b250a332f1917 477 SUPERFAMILY SSF53720 4 475 5.89E-146 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_002520 22ed586f89ec66b1fb3b250a332f1917 477 Gene3D G3DSA:3.40.605.10 30 461 1.1E-150 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 SUPERFAMILY SSF52242 7 145 2.49E-42 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 12 125 9.1E-17 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Pfam PF02310 B12 binding domain 14 116 2.8E-12 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Pfam PF01642 Methylmalonyl-CoA mutase 564 1082 7.3E-142 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 709 1087 1.0E-93 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Gene3D G3DSA:3.20.20.240 489 1088 2.9E-188 T 11-10-2018 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Gene3D G3DSA:3.40.50.300 201 410 2.7E-60 T 11-10-2018 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Pfam PF03308 ArgK protein 168 419 2.2E-44 T 11-10-2018 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Hamap MF_02050 Fused isobutyryl-CoA mutase [icmF]. 12 1088 16.988 T 11-10-2018 IPR033669 Fused isobutyryl-CoA mutase GO:0003924|GO:0005525|GO:0006637|GO:0031419|GO:0034784|GO:0047727 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 SUPERFAMILY SSF52540 151 466 4.82E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 SUPERFAMILY SSF51703 505 1084 6.54E-150 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_022995 84c984160cb4c9e9bd947917e10d5319 1088 Gene3D G3DSA:3.40.50.280 8 150 1.1E-60 T 11-10-2018 ABE28_021765 2af2515654f9dd459556b77046245147 275 Gene3D G3DSA:3.40.190.10 37 271 3.3E-97 T 11-10-2018 ABE28_021765 2af2515654f9dd459556b77046245147 275 Pfam PF03180 NLPA lipoprotein 35 273 8.4E-89 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_021765 2af2515654f9dd459556b77046245147 275 Gene3D G3DSA:3.40.190.10 116 224 3.3E-97 T 11-10-2018 ABE28_021765 2af2515654f9dd459556b77046245147 275 PIRSF PIRSF002854 1 275 1.3E-104 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_021765 2af2515654f9dd459556b77046245147 275 SUPERFAMILY SSF53850 34 273 1.18E-79 T 11-10-2018 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 332 5.1E-139 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 SUPERFAMILY SSF55307 204 316 6.18E-44 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 371 39.489 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 Gene3D G3DSA:3.30.1330.20 221 325 7.0E-42 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 Gene3D G3DSA:3.40.50.1440 4 220 1.3E-83 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 SMART SM00865 207 324 1.6E-55 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 SMART SM00864 13 205 7.6E-117 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 7.6E-44 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 SUPERFAMILY SSF52490 12 208 3.92E-72 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.0E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 Pfam PF12327 FtsZ family, C-terminal domain 222 315 4.1E-33 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal ABE28_007535 43cc35ee35e0c705962a09a87e43e471 384 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 76.622 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 11 132 3.0E-54 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 Gene3D G3DSA:2.40.280.10 3 129 3.3E-53 T 11-10-2018 IPR023620 Small protein B ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 SUPERFAMILY SSF74982 4 132 6.54E-54 T 11-10-2018 IPR023620 Small protein B ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 3.3E-59 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABE28_022075 09dd3cc68260e5d50338c5bdfdc37032 155 Pfam PF01668 SmpB protein 10 150 1.7E-63 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 ABE28_001680 9ce4b008c1ea7fe5d7fa9cf793aa6c92 458 SUPERFAMILY SSF56601 59 426 9.06E-78 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_001680 9ce4b008c1ea7fe5d7fa9cf793aa6c92 458 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 1 454 65.205 T 11-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type ABE28_001680 9ce4b008c1ea7fe5d7fa9cf793aa6c92 458 Pfam PF00144 Beta-lactamase 66 421 8.5E-67 T 11-10-2018 IPR001466 Beta-lactamase-related ABE28_001680 9ce4b008c1ea7fe5d7fa9cf793aa6c92 458 Gene3D G3DSA:3.40.710.10 46 429 5.2E-84 T 11-10-2018 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 1.7E-84 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 266 26.186 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 SUPERFAMILY SSF48179 161 269 1.46E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 4.2E-36 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 Gene3D G3DSA:3.40.50.720 1 163 1.5E-47 T 11-10-2018 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 SUPERFAMILY SSF51735 2 160 1.01E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 Gene3D G3DSA:1.10.3730.10 164 271 2.5E-39 T 11-10-2018 ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 99 4.9E-21 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_014735 fe18b6d808a53a52dd14f1119380ab60 281 PIRSF PIRSF000193 1 269 1.2E-78 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_007670 38ec2a5734cc2a99cdc2b64e514aa0a3 87 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 77 2.0E-32 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A ABE28_007670 38ec2a5734cc2a99cdc2b64e514aa0a3 87 Pfam PF04025 Domain of unknown function (DUF370) 5 77 2.7E-37 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A ABE28_007670 38ec2a5734cc2a99cdc2b64e514aa0a3 87 Hamap MF_01503 UPF0296 protein . 3 86 29.551 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 Pfam PF00551 Formyl transferase 2 182 2.9E-63 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 Gene3D G3DSA:3.40.50.170 1 191 2.0E-75 T 11-10-2018 ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 SUPERFAMILY SSF53328 2 190 2.49E-62 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 2 190 1.2E-75 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ABE28_001930 6e78bceffc90b65b6452273621d1153c 191 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.819 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PIRSF PIRSF038927 1 689 0.0 T 11-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Pfam PF06628 Catalase-related immune-responsive 447 511 2.2E-23 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Pfam PF01965 DJ-1/PfpI family 544 670 2.5E-13 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 SUPERFAMILY SSF52317 543 657 2.12E-19 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 362 370 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 317 344 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 45 68 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 129 146 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 148 166 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 108 126 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 PRINTS PR00067 Catalase signature 349 375 2.0E-71 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Gene3D G3DSA:3.40.50.880 538 689 9.1E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Pfam PF00199 Catalase 32 416 4.0E-182 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 SMART SM01060 32 420 2.8E-276 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Gene3D G3DSA:1.20.1370.20 443 537 1.6E-33 T 11-10-2018 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 Gene3D G3DSA:2.40.180.10 2 442 2.1E-212 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 ProSitePatterns PS00438 Catalase proximal active site signature. 68 84 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023615 34fa01aaccff947868639c6bb8526c34 689 SUPERFAMILY SSF56634 14 533 3.14E-226 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 ABE28_023205 4972d0ad005bccd78ff52682d3152fc3 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 155 6.6E-57 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABE28_023205 4972d0ad005bccd78ff52682d3152fc3 158 Gene3D G3DSA:3.90.960.10 2 158 4.9E-51 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_023205 4972d0ad005bccd78ff52682d3152fc3 158 PIRSF PIRSF006181 1 158 1.6E-59 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC ABE28_023205 4972d0ad005bccd78ff52682d3152fc3 158 SUPERFAMILY SSF55826 6 154 1.96E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_023205 4972d0ad005bccd78ff52682d3152fc3 158 Pfam PF04073 Aminoacyl-tRNA editing domain 35 147 8.5E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 Gene3D G3DSA:3.30.300.30 458 569 1.9E-27 T 11-10-2018 ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 1.8E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 SUPERFAMILY SSF56801 11 562 2.09E-161 T 11-10-2018 ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 Pfam PF00501 AMP-binding enzyme 50 461 6.6E-92 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_017300 e644276dbab7bd10a41c55b036c258c6 572 Gene3D G3DSA:3.40.50.12780 17 455 1.9E-119 T 11-10-2018 ABE28_013895 31349b648065d28298379f3159b0d345 303 SUPERFAMILY SSF103481 212 294 3.92E-13 T 11-10-2018 ABE28_013895 31349b648065d28298379f3159b0d345 303 Pfam PF00892 EamA-like transporter family 147 286 1.2E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_013895 31349b648065d28298379f3159b0d345 303 Pfam PF00892 EamA-like transporter family 5 138 7.5E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_013895 31349b648065d28298379f3159b0d345 303 SUPERFAMILY SSF103481 39 142 1.44E-12 T 11-10-2018 ABE28_021605 fd9130a0501f1f65a2339d5319850bbe 78 Gene3D G3DSA:3.30.300.130 1 78 2.2E-32 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_021605 fd9130a0501f1f65a2339d5319850bbe 78 SUPERFAMILY SSF117916 2 77 3.11E-26 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_021605 fd9130a0501f1f65a2339d5319850bbe 78 Pfam PF01106 NifU-like domain 10 75 7.6E-28 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABE28_021605 fd9130a0501f1f65a2339d5319850bbe 78 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 14 65 8.0E-23 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 14 1241 0.0 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 SUPERFAMILY SSF52540 13 903 3.75E-115 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Gene3D G3DSA:3.90.320.10 1000 1242 2.2E-81 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Pfam PF13361 UvrD-like helicase C-terminal domain 478 898 2.2E-34 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Gene3D G3DSA:3.40.50.300 281 480 2.2E-31 T 11-10-2018 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Gene3D G3DSA:3.40.50.300 10 192 8.9E-39 T 11-10-2018 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 12 1242 19.755 T 11-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1058 1221 2.4E-10 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Pfam PF00580 UvrD/REP helicase N-terminal domain 15 467 5.0E-86 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Gene3D G3DSA:3.40.50.300 771 969 1.5E-48 T 11-10-2018 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 Gene3D G3DSA:3.40.50.300 481 770 4.2E-55 T 11-10-2018 ABE28_005870 00edaec481eb316f723a3a53a17138fe 1242 SUPERFAMILY SSF52980 1022 1236 1.23E-39 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 PIRSF PIRSF000139 6 441 6.8E-140 T 11-10-2018 ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 Gene3D G3DSA:1.10.1060.10 2 113 1.5E-7 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 Pfam PF13183 4Fe-4S dicluster domain 23 92 2.0E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 Pfam PF02754 Cysteine-rich domain 198 280 1.1E-20 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 Pfam PF02754 Cysteine-rich domain 329 414 4.1E-14 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_016790 bc17f8489c8e3f57022b3eebce21db89 441 SUPERFAMILY SSF46548 10 107 2.46E-18 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_015985 88f9d202a86184984541e776ffbff287 232 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABE28_015985 88f9d202a86184984541e776ffbff287 232 Gene3D G3DSA:2.160.10.10 7 225 1.4E-47 T 11-10-2018 ABE28_015985 88f9d202a86184984541e776ffbff287 232 SUPERFAMILY SSF51161 19 212 1.36E-36 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_015985 88f9d202a86184984541e776ffbff287 232 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 131 165 1.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_011395 59f4f650ac8829972f8cab70c0f675b6 687 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 15 437 3.0E-90 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 ABE28_011395 59f4f650ac8829972f8cab70c0f675b6 687 Pfam PF00999 Sodium/hydrogen exchanger family 11 429 7.4E-55 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABE28_010430 03cd46bd3ae09475be874fe96e365b97 331 Gene3D G3DSA:3.40.50.970 1 331 1.0E-114 T 11-10-2018 ABE28_010430 03cd46bd3ae09475be874fe96e365b97 331 SUPERFAMILY SSF52518 10 330 2.95E-99 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_010430 03cd46bd3ae09475be874fe96e365b97 331 Pfam PF00676 Dehydrogenase E1 component 21 317 1.1E-102 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_012310 1dddc16cde061448af5f45f495357700 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 328 1.5E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_012310 1dddc16cde061448af5f45f495357700 330 SMART SM00382 49 241 5.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012310 1dddc16cde061448af5f45f495357700 330 SUPERFAMILY SSF52540 20 263 2.32E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012310 1dddc16cde061448af5f45f495357700 330 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_012310 1dddc16cde061448af5f45f495357700 330 Gene3D G3DSA:3.40.50.300 18 330 5.6E-106 T 11-10-2018 ABE28_012310 1dddc16cde061448af5f45f495357700 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 2.1E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_012310 1dddc16cde061448af5f45f495357700 330 Pfam PF00005 ABC transporter 41 191 8.8E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF04561 RNA polymerase Rpb2, domain 2 373 410 6.6E-6 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 286 6.3E-25 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:3.90.1100.10 607 671 5.5E-19 T 11-10-2018 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 11-10-2018 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1069 5.6E-164 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF04563 RNA polymerase beta subunit 28 454 3.7E-30 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:2.40.270.10 752 790 5.7E-7 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 1.8E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:3.90.1100.10 20 154 9.3E-54 T 11-10-2018 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 1.3E-30 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 SUPERFAMILY SSF64484 13 1156 0.0 T 11-10-2018 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:2.40.50.150 791 930 3.1E-60 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:3.90.1110.10 155 272 2.8E-8 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.593 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:2.40.270.10 981 1047 1.9E-23 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 5.9E-25 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:2.40.50.100 672 751 6.5E-27 T 11-10-2018 ABE28_000545 3acacd79c72593e1250426505a19941f 1189 Gene3D G3DSA:3.90.1100.10 389 583 5.7E-75 T 11-10-2018 ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Gene3D G3DSA:3.40.50.300 187 369 5.6E-13 T 11-10-2018 ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Gene3D G3DSA:1.10.10.160 424 499 1.6E-6 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Pfam PF13538 UvrD-like helicase C-terminal domain 694 739 1.1E-6 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Pfam PF13245 AAA domain 202 563 5.5E-12 T 11-10-2018 ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 SUPERFAMILY SSF52540 191 746 3.94E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Gene3D G3DSA:3.40.50.300 417 566 1.6E-6 T 11-10-2018 ABE28_012885 38351f25171b18345c18f7b01d37dd48 752 Gene3D G3DSA:3.40.50.300 587 752 1.9E-37 T 11-10-2018 ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 SUPERFAMILY SSF51735 35 208 1.73E-33 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 SUPERFAMILY SSF55347 174 324 3.05E-24 T 11-10-2018 ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 176 276 2.8E-8 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 39 161 2.4E-21 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 Gene3D G3DSA:3.30.360.10 165 405 4.1E-34 T 11-10-2018 ABE28_009830 f6904a260999a7292ce4fe76193c006e 410 Gene3D G3DSA:3.40.50.720 32 164 5.4E-27 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:3.30.70.20 127 209 1.2E-21 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF00384 Molybdopterin oxidoreductase 315 738 6.8E-81 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 86 123 8.2E-9 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SMART SM00926 258 312 1.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF00037 4Fe-4S binding domain 142 158 6.1E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF00037 4Fe-4S binding domain 186 206 4.0E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SUPERFAMILY SSF54862 77 212 5.86E-28 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 PIRSF PIRSF036643 1 966 0.0 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SUPERFAMILY SSF50692 788 934 7.46E-37 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 76 9.7E-15 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF01568 Molydopterin dinucleotide binding domain 822 929 5.0E-21 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:2.40.40.20 815 940 8.3E-30 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:2.20.25.90 258 313 3.5E-19 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:3.10.20.740 4 125 2.5E-25 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 259 312 2.8E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:3.40.228.10 393 593 4.9E-167 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SMART SM00929 84 125 1.5E-7 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SUPERFAMILY SSF54292 5 75 2.56E-15 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 SUPERFAMILY SSF53706 252 772 7.72E-192 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 Gene3D G3DSA:3.40.50.740 320 781 4.9E-167 T 11-10-2018 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 263 932 4.0E-256 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 ABE28_002930 eeedcd69ea4d2d42610c1fead65723d7 984 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 191 202 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 302 91.351 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 1.4E-98 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Pfam PF01565 FAD binding domain 35 165 1.6E-24 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Gene3D G3DSA:3.30.43.10 1 88 3.1E-29 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 3.2E-28 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Gene3D G3DSA:3.30.465.10 89 216 4.0E-47 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 SUPERFAMILY SSF56194 196 300 1.83E-37 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 Gene3D G3DSA:3.90.78.10 217 302 1.1E-33 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_007520 088cbfd7479d3799eb83c06ab580f847 302 SUPERFAMILY SSF56176 21 210 4.0E-44 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_024080 b9f75588d0966a58373574e47ccc6874 77 Pfam PF13129 Protein of unknown function (DUF3953) 32 72 2.2E-13 T 11-10-2018 IPR025018 Protein of unknown function DUF3953 ABE28_021005 e28bf3cf1df3913c578a3fdf2752d23b 406 Gene3D G3DSA:1.10.10.2840 273 405 1.4E-17 T 11-10-2018 ABE28_021005 e28bf3cf1df3913c578a3fdf2752d23b 406 Pfam PF13556 PucR C-terminal helix-turn-helix domain 343 400 7.0E-20 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_013515 3d8976774939bade40b1e34dc96773d7 234 Gene3D G3DSA:3.20.20.70 1 223 4.4E-63 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_013515 3d8976774939bade40b1e34dc96773d7 234 Pfam PF00834 Ribulose-phosphate 3 epimerase family 8 205 2.4E-56 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_013515 3d8976774939bade40b1e34dc96773d7 234 SUPERFAMILY SSF51366 6 205 5.97E-48 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_015245 8820c85f962f02761c4b08d9b78b5518 299 Gene3D G3DSA:1.10.3720.10 64 298 2.4E-39 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_015245 8820c85f962f02761c4b08d9b78b5518 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 296 2.5E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_015245 8820c85f962f02761c4b08d9b78b5518 299 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 14 295 7.2E-81 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 ABE28_015245 8820c85f962f02761c4b08d9b78b5518 299 SUPERFAMILY SSF161098 20 292 7.38E-38 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 Gene3D G3DSA:2.40.50.140 10 102 6.1E-7 T 11-10-2018 ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 Pfam PF01966 HD domain 161 278 2.5E-10 T 11-10-2018 IPR006674 HD domain ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 Pfam PF01336 OB-fold nucleic acid binding domain 14 88 1.0E-6 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 SUPERFAMILY SSF50249 31 96 3.14E-6 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 Gene3D G3DSA:1.10.3210.10 126 294 3.3E-12 T 11-10-2018 ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 SUPERFAMILY SSF109604 143 279 3.45E-15 T 11-10-2018 ABE28_005690 d93ebfdf6a4e44ae486a7b23d4c14b71 312 SMART SM00471 156 288 1.7E-4 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_003420 516109f62d4241324dd46a462ab52726 396 Pfam PF07905 Purine catabolism regulatory protein-like family 7 122 6.2E-31 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ABE28_003420 516109f62d4241324dd46a462ab52726 396 Pfam PF13556 PucR C-terminal helix-turn-helix domain 332 388 4.7E-15 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_003420 516109f62d4241324dd46a462ab52726 396 Gene3D G3DSA:1.10.10.2840 263 395 4.5E-18 T 11-10-2018 ABE28_008830 0dc3e0ea517d2262dd33afe928edb53e 70 Gene3D G3DSA:1.10.260.40 2 70 1.9E-11 T 11-10-2018 ABE28_008830 0dc3e0ea517d2262dd33afe928edb53e 70 SMART SM00530 6 62 5.4E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008830 0dc3e0ea517d2262dd33afe928edb53e 70 SUPERFAMILY SSF47413 2 68 1.46E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_008830 0dc3e0ea517d2262dd33afe928edb53e 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 4.1E-19 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 2 272 3.6E-67 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 SMART SM00962 185 376 2.9E-53 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 Gene3D G3DSA:1.20.120.1380 128 366 1.5E-83 T 11-10-2018 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 Pfam PF00448 SRP54-type protein, GTPase domain 186 375 1.2E-43 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 Gene3D G3DSA:3.40.50.300 180 364 1.5E-83 T 11-10-2018 ABE28_008050 9588df3b8a5a287abe9885b08419629d 384 SUPERFAMILY SSF52540 185 371 9.95E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 16 41 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 347 365 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 288 303 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 375 394 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 132 144 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 242 263 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 191 210 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 312 333 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 63 86 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 90 114 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 180 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 425 446 3.0E-101 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 244 298 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 SUPERFAMILY SSF81442 14 522 4.06E-177 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 Gene3D G3DSA:1.20.210.10 3 529 1.2E-201 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 25 469 2.9E-145 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007315 56704ed7d32093b32dcc9f9c00a73f7d 623 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 17 520 4.2E-204 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 1.7E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 1.7E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 1.7E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 1.7E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 1.7E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 SUPERFAMILY SSF109604 335 491 7.53E-15 T 11-10-2018 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 686 26.851 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 686 3.0E-250 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015390 82cd7221ae36d56bd2feb749bb233431 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 553 3.8E-211 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 36.778 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 Gene3D G3DSA:3.40.50.170 1 206 2.7E-87 T 11-10-2018 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 2.1E-29 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 SUPERFAMILY SSF53328 3 206 2.75E-68 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 3 303 4.2E-114 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 Pfam PF00551 Formyl transferase 3 180 4.2E-41 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 Gene3D G3DSA:3.10.25.10 207 316 6.1E-37 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_007700 f0cfd1e489813cea574c85b31da886bf 319 SUPERFAMILY SSF50486 205 309 2.35E-31 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ABE28_004490 f16e0a1b8b682c6bbd6e78bf30630396 366 Pfam PF03845 Spore germination protein 10 327 1.3E-52 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_004490 f16e0a1b8b682c6bbd6e78bf30630396 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 365 1.8E-47 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_011790 3cf0d1da504394dc6a5c67261d90d01d 171 Gene3D G3DSA:1.25.10.10 1 169 2.0E-16 T 11-10-2018 IPR011989 Armadillo-like helical ABE28_011790 3cf0d1da504394dc6a5c67261d90d01d 171 Pfam PF13646 HEAT repeats 38 124 7.2E-10 T 11-10-2018 ABE28_011790 3cf0d1da504394dc6a5c67261d90d01d 171 SUPERFAMILY SSF48371 23 141 3.37E-13 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 6.3E-113 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 Gene3D G3DSA:3.40.50.10490 10 214 2.9E-96 T 11-10-2018 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 Gene3D G3DSA:1.10.287.610 97 152 2.9E-96 T 11-10-2018 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 Pfam PF00318 Ribosomal protein S2 9 224 6.2E-102 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 43.666 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 37 46 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 175 186 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 87 104 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 6 24 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 196 210 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 PRINTS PR00395 Ribosomal protein S2 signature 158 175 5.9E-41 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 ABE28_008095 aa086a635e8b86157741e74e4fe4a0ea 237 SUPERFAMILY SSF52313 6 230 3.53E-100 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 Gene3D G3DSA:2.40.50.140 6 146 2.4E-45 T 11-10-2018 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 5 493 3.1E-221 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 SUPERFAMILY SSF50249 5 146 1.31E-44 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 Pfam PF00152 tRNA synthetases class II (D, K and N) 154 491 1.2E-83 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 SUPERFAMILY SSF55681 153 492 1.17E-123 T 11-10-2018 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 190 200 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 253 270 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 376 392 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 206 222 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PRINTS PR00982 Lysyl-tRNA synthetase signature 235 248 2.1E-39 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 12 494 45.402 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 Gene3D G3DSA:3.30.930.10 147 491 1.3E-138 T 11-10-2018 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 Pfam PF01336 OB-fold nucleic acid binding domain 60 134 8.5E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABE28_000405 138189a55943b395ec56f1b83c3b6db2 494 PIRSF PIRSF039101 2 494 8.6E-197 T 11-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 ABE28_000350 77a8199b78a370100885e4c002145ecb 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 4.0E-67 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 ABE28_000350 77a8199b78a370100885e4c002145ecb 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 2.8E-24 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_000350 77a8199b78a370100885e4c002145ecb 179 Gene3D G3DSA:3.40.50.2020 1 179 1.3E-65 T 11-10-2018 ABE28_000350 77a8199b78a370100885e4c002145ecb 179 SUPERFAMILY SSF53271 2 177 4.22E-60 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_013715 23c1c887d77f4890d476a550d0e82fd1 473 PIRSF PIRSF006060 3 471 3.0E-82 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_013715 23c1c887d77f4890d476a550d0e82fd1 473 Pfam PF00324 Amino acid permease 19 434 1.2E-116 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_013715 23c1c887d77f4890d476a550d0e82fd1 473 Gene3D G3DSA:1.20.1740.10 9 469 3.1E-63 T 11-10-2018 ABE28_013715 23c1c887d77f4890d476a550d0e82fd1 473 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 6.2E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 SUPERFAMILY SSF52518 2 204 5.4E-74 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 Gene3D G3DSA:3.40.50.920 193 327 9.1E-44 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 SUPERFAMILY SSF52922 188 325 2.36E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 1.5E-42 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 SMART SM00861 4 179 1.7E-72 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014860 586c7f3d7c465e4a04cb8b15fb68b9bf 327 Gene3D G3DSA:3.40.50.970 1 192 2.4E-93 T 11-10-2018 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 274 290 8.6E-28 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 193 204 8.6E-28 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 136 156 8.6E-28 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 PRINTS PR00730 Thermolysin metalloprotease (M4) family signature 172 188 8.6E-28 T 11-10-2018 IPR023612 Peptidase M4 GO:0004222|GO:0006508 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 Pfam PF02868 Thermolysin metallopeptidase, alpha-helical domain 184 350 5.5E-47 T 11-10-2018 IPR001570 Peptidase M4, C-terminal GO:0004222 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 Gene3D G3DSA:3.10.170.10 8 185 1.4E-51 T 11-10-2018 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 Gene3D G3DSA:1.10.390.10 186 351 9.8E-57 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 Pfam PF01447 Thermolysin metallopeptidase, catalytic domain 98 181 5.9E-28 T 11-10-2018 IPR013856 Peptidase M4 domain GO:0004222 ABE28_018900 546ad1f7c82ea23b43880336705e1fff 353 SUPERFAMILY SSF55486 94 351 3.11E-77 T 11-10-2018 ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 Gene3D G3DSA:3.30.450.20 52 161 1.9E-33 T 11-10-2018 ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 Gene3D G3DSA:3.90.1640.10 322 540 2.4E-53 T 11-10-2018 ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 Pfam PF02272 DHHA1 domain 518 644 4.1E-15 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 SMART SM00267 132 299 1.1E-5 T 11-10-2018 IPR000160 GGDEF domain ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 SUPERFAMILY SSF64182 338 630 2.35E-68 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 PIRSF PIRSF026583 1 656 8.5E-267 T 11-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 Gene3D G3DSA:3.10.310.30 543 652 2.4E-9 T 11-10-2018 ABE28_023710 1e2bd522b92f358c42c8750e97964062 656 Pfam PF01368 DHH family 339 496 1.8E-23 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Pfam PF13414 TPR repeat 41 80 4.4E-11 T 11-10-2018 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SMART SM00028 34 67 3.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SMART SM00028 103 136 0.094 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SMART SM00028 4 33 10.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SMART SM00028 68 102 9.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SMART SM00028 171 205 0.21 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Gene3D G3DSA:1.25.40.10 2 101 3.7E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Pfam PF07719 Tetratricopeptide repeat 5 32 7.6E-6 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Gene3D G3DSA:1.25.40.10 102 221 1.4E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 SUPERFAMILY SSF48452 5 208 1.61E-40 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Pfam PF13181 Tetratricopeptide repeat 171 205 3.1E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_015780 0cdbe09d7912773e46836a78483b0f41 221 Pfam PF13432 Tetratricopeptide repeat 107 155 4.0E-4 T 11-10-2018 ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 Gene3D G3DSA:1.10.357.10 1 194 1.7E-24 T 11-10-2018 ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 SUPERFAMILY SSF46689 3 65 1.55E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 2.9E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 7.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_021195 4e541d2d6efdf6694a3a77a570f2d60f 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 7.2E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_020375 4d3b1711ed4d2881d1fe1589b39b0aa6 488 Gene3D G3DSA:3.90.1300.10 2 488 1.1E-165 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_020375 4d3b1711ed4d2881d1fe1589b39b0aa6 488 Pfam PF01425 Amidase 31 469 9.0E-81 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_020375 4d3b1711ed4d2881d1fe1589b39b0aa6 488 SUPERFAMILY SSF75304 12 486 9.94E-105 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 113 341 1.7E-83 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 ProSitePatterns PS01215 Mrp family signature. 215 231 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 Gene3D G3DSA:3.40.50.300 106 333 9.6E-63 T 11-10-2018 ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 Hamap MF_02040 Iron-sulfur cluster carrier protein. 99 346 32.242 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 SUPERFAMILY SSF52540 112 349 1.8E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 Gene3D G3DSA:3.30.300.130 1 95 7.1E-19 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 Pfam PF01883 Iron-sulfur cluster assembly protein 5 69 4.8E-19 T 11-10-2018 IPR002744 MIP18 family-like ABE28_002890 1f9934219b80c21d77b8f065c2e39263 354 SUPERFAMILY SSF117916 1 92 9.16E-20 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_002060 395c17f257b6922ca1a341620ebe57c7 67 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 2.9E-22 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 ABE28_002060 395c17f257b6922ca1a341620ebe57c7 67 Gene3D G3DSA:1.20.1260.10 1 67 5.3E-5 T 11-10-2018 IPR012347 Ferritin-like ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 Pfam PF02780 Transketolase, C-terminal domain 195 317 4.4E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 179 5.5E-49 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 SUPERFAMILY SSF52518 2 205 6.87E-70 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 Gene3D G3DSA:3.40.50.920 194 326 9.7E-49 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 SMART SM00861 5 180 3.7E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 SUPERFAMILY SSF52922 190 326 3.01E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_005380 ca203ddb216d499eb9834e9d2aee1f06 327 Gene3D G3DSA:3.40.50.970 3 193 5.9E-85 T 11-10-2018 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 68 1.1E-25 T 11-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 Pfam PF00403 Heavy-metal-associated domain 5 66 2.9E-17 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 SUPERFAMILY SSF55008 1 68 1.57E-20 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 PRINTS PR00944 Copper ion binding protein signature 3 15 5.4E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 PRINTS PR00944 Copper ion binding protein signature 28 41 5.4E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 PRINTS PR00944 Copper ion binding protein signature 15 28 5.4E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 PRINTS PR00944 Copper ion binding protein signature 54 67 5.4E-9 T 11-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 ABE28_010310 f44dcd927ea0162538137f238c2b02e5 68 Gene3D G3DSA:3.30.70.100 1 68 2.2E-25 T 11-10-2018 ABE28_016265 4a4e58606ad01f617127a8c0b1da0d12 281 Pfam PF04228 Putative neutral zinc metallopeptidase 1 276 2.5E-114 T 11-10-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 517 542 6.4E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 510 536 1.9E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 481 508 1.7E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 455 480 2.4E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 562 763 1.4E-68 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 SUPERFAMILY SSF101967 392 525 6.41E-5 T 11-10-2018 ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 SUPERFAMILY SSF58104 149 355 4.45E-6 T 11-10-2018 ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 Pfam PF12698 ABC-2 family transporter protein 557 759 5.5E-21 T 11-10-2018 ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 Pfam PF12698 ABC-2 family transporter protein 5 150 1.2E-12 T 11-10-2018 ABE28_012420 a96d0fa2aba474ec541b5431da164ebc 780 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 2 154 6.6E-63 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_014520 7748fed82acbdecf29350061f92a8793 548 Gene3D G3DSA:3.50.50.60 120 248 7.2E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014520 7748fed82acbdecf29350061f92a8793 548 SUPERFAMILY SSF52833 341 453 1.7E-21 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 4.9E-35 T 11-10-2018 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 4.9E-35 T 11-10-2018 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 4.9E-35 T 11-10-2018 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 4.9E-35 T 11-10-2018 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.9E-35 T 11-10-2018 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 Pfam PF13192 Thioredoxin domain 472 547 1.1E-17 T 11-10-2018 IPR012336 Thioredoxin-like fold ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PIRSF PIRSF000238 1 313 6.4E-63 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PIRSF PIRSF000238 341 548 4.6E-35 T 11-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 SUPERFAMILY SSF51905 2 306 3.83E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014520 7748fed82acbdecf29350061f92a8793 548 SUPERFAMILY SSF52833 457 547 4.88E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 271 289 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 237 258 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 39 54 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 59 69 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 6 28 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.6E-63 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 Gene3D G3DSA:3.50.50.60 8 307 7.2E-104 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014520 7748fed82acbdecf29350061f92a8793 548 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 297 3.7E-46 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_014520 7748fed82acbdecf29350061f92a8793 548 TIGRFAM TIGR03143 AhpF_homolog: putative alkyl hydroperoxide reductase F subunit 1 545 3.3E-247 T 11-10-2018 IPR017561 Alkyl hydroperoxide reductase F subunit homogue, putative ABE28_014520 7748fed82acbdecf29350061f92a8793 548 Gene3D G3DSA:3.40.30.80 341 548 6.5E-64 T 11-10-2018 ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Gene3D G3DSA:3.10.350.10 314 360 4.5E-15 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SMART SM00257 316 360 8.7E-15 T 11-10-2018 IPR018392 LysM domain ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SMART SM00257 117 158 1.3E-6 T 11-10-2018 IPR018392 LysM domain ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SUPERFAMILY SSF54106 316 360 1.14E-8 T 11-10-2018 ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Gene3D G3DSA:2.30.30.40 165 227 6.0E-15 T 11-10-2018 ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Pfam PF08239 Bacterial SH3 domain 169 219 1.6E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Pfam PF08239 Bacterial SH3 domain 249 300 2.9E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Gene3D G3DSA:3.10.350.10 105 164 2.3E-10 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Gene3D G3DSA:2.30.30.40 241 299 8.6E-16 T 11-10-2018 ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SMART SM00287 160 222 8.3E-10 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SMART SM00287 241 303 4.9E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Pfam PF01476 LysM domain 317 360 5.7E-11 T 11-10-2018 IPR018392 LysM domain ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 Pfam PF01476 LysM domain 118 158 9.2E-8 T 11-10-2018 IPR018392 LysM domain ABE28_024175 8df0292827fdfa9f8446d3266692cb0a 439 SUPERFAMILY SSF54106 116 157 6.02E-6 T 11-10-2018 ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 SUPERFAMILY SSF109604 509 686 2.37E-13 T 11-10-2018 ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 Pfam PF07697 7TM-HD extracellular 50 277 5.4E-31 T 11-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 Pfam PF07698 7TM receptor with intracellular HD hydrolase 286 485 6.4E-37 T 11-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 SMART SM00471 506 661 8.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 TIGRFAM TIGR00277 HDIG: HDIG domain 507 605 2.6E-25 T 11-10-2018 IPR006675 HDIG domain ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 Pfam PF01966 HD domain 510 651 1.5E-16 T 11-10-2018 IPR006674 HD domain ABE28_015430 b6d5a9b36c0f8c16221dfd9be7e7efd5 724 Gene3D G3DSA:1.10.3210.10 498 694 1.8E-25 T 11-10-2018 ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 SUPERFAMILY SSF52540 275 489 6.74E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 Pfam PF12848 ABC transporter 174 271 3.3E-8 T 11-10-2018 IPR032781 ABC-transporter extension domain ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 Gene3D G3DSA:3.40.50.300 254 510 1.3E-45 T 11-10-2018 ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 Gene3D G3DSA:3.40.50.300 1 215 3.7E-47 T 11-10-2018 ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 SMART SM00382 29 185 4.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 SMART SM00382 318 484 5.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 Pfam PF00005 ABC transporter 310 437 1.9E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 SUPERFAMILY SSF52540 4 208 2.23E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004090 faa0522ff53fc6cf0de3bd888f1e3371 543 Pfam PF00005 ABC transporter 21 134 8.0E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 Gene3D G3DSA:3.40.50.300 27 250 4.8E-47 T 11-10-2018 ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 SMART SM00487 56 260 1.9E-31 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 Gene3D G3DSA:3.40.50.300 271 428 3.3E-20 T 11-10-2018 ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 Pfam PF09369 Domain of unknown function (DUF1998) 654 733 2.0E-21 T 11-10-2018 IPR018973 DEAD/DEAH-box helicase, putative ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 Pfam PF00271 Helicase conserved C-terminal domain 290 393 4.6E-13 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 SMART SM00490 307 394 2.9E-14 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 Pfam PF00270 DEAD/DEAH box helicase 63 234 9.4E-27 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_014005 8cb7d65092e285864b2faf1c75997acd 759 SUPERFAMILY SSF52540 70 400 9.31E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Gene3D G3DSA:1.20.272.10 228 332 1.4E-42 T 11-10-2018 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 8 124 1.8E-16 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Gene3D G3DSA:1.10.3710.10 333 423 5.4E-24 T 11-10-2018 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 SUPERFAMILY SSF52540 4 234 1.21E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 419 2.7E-65 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 SUPERFAMILY SSF48019 239 421 2.61E-70 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Gene3D G3DSA:1.10.8.60 151 226 2.8E-21 T 11-10-2018 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Pfam PF16193 AAA C-terminal domain 174 253 6.8E-25 T 11-10-2018 IPR032423 AAA C-terminal domain ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 Gene3D G3DSA:3.40.50.300 1 150 4.2E-41 T 11-10-2018 ABE28_015810 f25eb74f52aa044b0a367c590e57a1fe 423 SMART SM00382 39 151 5.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 85 2.5E-18 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 87 164 4.1E-7 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 PIRSF PIRSF000709 1 88 1.9E-7 T 11-10-2018 ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 SUPERFAMILY SSF53254 2 172 1.01E-30 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 Gene3D G3DSA:3.40.50.1240 86 172 3.5E-9 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 Gene3D G3DSA:3.40.50.1240 1 85 9.7E-19 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_004070 56854e1f3e823857dc08a8f739c3f61c 172 SMART SM00855 2 126 2.8E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 Pfam PF00005 ABC transporter 19 165 1.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 4.6E-87 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 SMART SM00382 27 214 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 Gene3D G3DSA:3.40.50.300 1 224 3.3E-66 T 11-10-2018 ABE28_022365 ad195c650800ba0b9c206a5bc4a477e4 228 SUPERFAMILY SSF52540 1 222 4.09E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005285 9e2e05dc81099351409f79d45c7156d9 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_005285 9e2e05dc81099351409f79d45c7156d9 386 Pfam PF01098 Cell cycle protein 12 375 6.0E-99 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_005285 9e2e05dc81099351409f79d45c7156d9 386 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 375 9.3E-108 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Gene3D G3DSA:3.40.50.620 634 769 4.1E-5 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Gene3D G3DSA:3.40.50.620 249 380 1.8E-7 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_011385 e750e4fa687c270a27136856373dcb08 771 SUPERFAMILY SSF52540 406 539 1.23E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Gene3D G3DSA:3.40.50.300 414 623 5.6E-90 T 11-10-2018 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Gene3D G3DSA:3.40.50.300 19 228 3.2E-58 T 11-10-2018 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 415 624 1.6E-91 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 21 229 3.6E-60 T 11-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 Pfam PF00582 Universal stress protein family 250 370 3.1E-5 T 11-10-2018 IPR006016 UspA ABE28_011385 e750e4fa687c270a27136856373dcb08 771 SUPERFAMILY SSF52402 647 769 9.21E-8 T 11-10-2018 ABE28_011385 e750e4fa687c270a27136856373dcb08 771 SUPERFAMILY SSF52402 250 374 1.42E-9 T 11-10-2018 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 Gene3D G3DSA:2.40.37.10 14 368 1.7E-124 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 SMART SM01005 246 371 4.8E-65 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 279 294 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 69 87 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 353 366 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 204 231 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 129 141 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 262 277 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 33 49 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 164 175 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 PRINTS PR00992 Alanine racemase signature 299 316 4.7E-70 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 SUPERFAMILY SSF50621 241 380 3.24E-49 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 Pfam PF01168 Alanine racemase, N-terminal domain 14 231 9.7E-62 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 Gene3D G3DSA:3.20.20.10 16 235 1.7E-124 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 Hamap MF_01201 Alanine racemase. 7 371 34.168 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 Pfam PF00842 Alanine racemase, C-terminal domain 248 370 4.0E-45 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 SUPERFAMILY SSF51419 14 235 1.68E-58 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_001385 75dba57fca950aca1c79807db4de35f2 385 TIGRFAM TIGR00492 alr: alanine racemase 8 371 1.5E-118 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 244 260 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 124 138 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 299 318 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 192 211 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 154 173 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 269 284 1.3E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 244 256 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 PIRSF PIRSF001415 1 328 1.1E-154 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 SMART SM01004 4 325 1.0E-233 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 Gene3D G3DSA:3.20.20.70 2 331 2.9E-150 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 SUPERFAMILY SSF51569 4 327 5.57E-142 T 11-10-2018 ABE28_016450 1b7f0b9bbd76bf8b0499b5a5ae92939a 331 Pfam PF00490 Delta-aminolevulinic acid dehydratase 7 324 2.4E-151 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 ABE28_000455 659714dec2e6ae5cf7b9f8cec882bb36 364 Pfam PF01938 TRAM domain 295 348 9.3E-7 T 11-10-2018 IPR002792 TRAM domain ABE28_000455 659714dec2e6ae5cf7b9f8cec882bb36 364 Gene3D G3DSA:3.40.50.1010 160 295 1.7E-53 T 11-10-2018 ABE28_000455 659714dec2e6ae5cf7b9f8cec882bb36 364 SUPERFAMILY SSF88723 165 292 2.08E-23 T 11-10-2018 IPR029060 PIN-like domain superfamily ABE28_000455 659714dec2e6ae5cf7b9f8cec882bb36 364 SMART SM00670 164 271 8.1E-13 T 11-10-2018 IPR002716 PIN domain ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 12 320 23.265 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 SMART SM00977 385 459 3.3E-15 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 SUPERFAMILY SSF82829 218 325 4.45E-12 T 11-10-2018 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 SUPERFAMILY SSF56037 375 444 2.59E-14 T 11-10-2018 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Pfam PF01171 PP-loop family 22 206 1.1E-52 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Gene3D G3DSA:1.20.59.30 248 331 7.3E-29 T 11-10-2018 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 209 2.3E-55 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Pfam PF09179 TilS substrate binding domain 260 318 4.9E-6 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Pfam PF11734 TilS substrate C-terminal domain 386 443 7.3E-12 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 SUPERFAMILY SSF52402 9 238 1.1E-57 T 11-10-2018 ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 Gene3D G3DSA:3.40.50.620 8 239 3.2E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000345 593829e2623cb36ce012ad80f7e5da2d 464 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 386 430 3.0E-16 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.2090.10 177 262 4.0E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.2090.10 685 766 4.0E-237 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 SUPERFAMILY SSF82693 151 303 1.36E-6 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.70.1430 538 635 4.0E-237 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 455 478 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 322 345 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 377 401 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 349 370 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 PRINTS PR00702 Acriflavin resistance protein family signature 430 453 2.1E-38 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.70.1320 133 318 4.0E-237 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:1.20.1640.10 493 986 4.0E-237 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.70.1430 41 774 4.0E-237 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Pfam PF00873 AcrB/AcrD/AcrF family 6 989 1.7E-190 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 SUPERFAMILY SSF82866 807 993 6.02E-43 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:3.30.70.1440 636 829 4.0E-237 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 SUPERFAMILY SSF82693 42 132 2.67E-18 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 SUPERFAMILY SSF82866 285 480 1.31E-39 T 11-10-2018 ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 SUPERFAMILY SSF82714 183 257 1.03E-6 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains ABE28_018315 9dc456a2fd77fc79d842c6f120668dd9 1011 Gene3D G3DSA:1.20.1640.10 11 492 4.0E-237 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 8.7E-244 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 140 1.1E-20 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 7.2E-27 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 Gene3D G3DSA:3.50.50.60 152 282 1.5E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 1.4E-25 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 1.4E-25 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 1.4E-25 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 1.4E-25 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 SUPERFAMILY SSF46548 2 163 4.66E-34 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 Gene3D G3DSA:1.10.1060.10 9 151 6.9E-19 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 SUPERFAMILY SSF51971 151 421 1.24E-61 T 11-10-2018 ABE28_020570 fc72d39bd35de1c637c56323419470b3 493 Gene3D G3DSA:3.50.50.60 289 488 5.4E-17 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.40.50.140 64 127 9.9E-27 T 11-10-2018 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 1.5E-26 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50104 1 62 1.02E-21 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50249 128 185 1.14E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 5.7E-23 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 PIRSF PIRSF005901 1 185 6.5E-72 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.30.30.30 1 62 1.3E-31 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 3.2E-28 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Gene3D G3DSA:2.40.50.140 128 185 3.8E-26 T 11-10-2018 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 SMART SM01185 67 121 1.3E-25 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 5.0E-81 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 SUPERFAMILY SSF50249 65 129 1.54E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.428 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 ABE28_015010 ecee14d8c53da4c3f173131ffe8a4c21 185 SMART SM00841 129 184 3.5E-33 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 SMART SM00382 177 319 3.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Pfam PF00158 Sigma-54 interaction domain 157 322 1.6E-60 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 122 4.4E-7 T 11-10-2018 IPR000014 PAS domain ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 369 378 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 SUPERFAMILY SSF46689 369 473 1.48E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 SUPERFAMILY SSF52540 156 402 2.43E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Gene3D G3DSA:1.10.10.60 401 476 2.9E-15 T 11-10-2018 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 SUPERFAMILY SSF55785 9 115 7.8E-11 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 454 1.3E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 454 474 1.3E-6 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Gene3D G3DSA:3.40.50.300 142 327 3.9E-58 T 11-10-2018 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Gene3D G3DSA:1.10.8.60 329 400 4.3E-20 T 11-10-2018 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Pfam PF02954 Bacterial regulatory protein, Fis family 431 471 7.4E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Pfam PF13426 PAS domain 21 121 1.2E-8 T 11-10-2018 IPR000014 PAS domain ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 242 257 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_018480 cc8341ea5392c3b2cb9904356474e904 484 Gene3D G3DSA:3.30.450.20 2 120 1.2E-14 T 11-10-2018 ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 21 459 7.8E-154 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 SUPERFAMILY SSF49899 334 489 4.99E-34 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 Gene3D G3DSA:2.60.120.560 351 486 6.8E-36 T 11-10-2018 ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 30 334 5.3E-110 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 337 484 1.7E-30 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 Gene3D G3DSA:2.115.10.20 2 350 1.8E-133 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 SMART SM00640 30 449 1.8E-153 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 ABE28_011645 561adda9de8ccf8bed4fd240a14ac625 490 SUPERFAMILY SSF75005 22 335 9.94E-117 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 134 5.9E-18 T 11-10-2018 IPR000014 PAS domain ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 176 300 2.8E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 Gene3D G3DSA:3.30.450.20 3 106 2.9E-5 T 11-10-2018 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 SUPERFAMILY SSF55785 26 127 1.1E-24 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 SUPERFAMILY SSF58104 104 296 7.98E-43 T 11-10-2018 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 Gene3D G3DSA:1.10.287.950 112 305 1.7E-36 T 11-10-2018 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 SMART SM00283 115 303 7.5E-5 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 Pfam PF08447 PAS fold 38 123 2.4E-14 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 ABE28_009510 f67bfa28b54f2658df6fcd72e6530598 306 SMART SM00086 88 130 4.9E-4 T 11-10-2018 IPR001610 PAC motif ABE28_012550 04a19536f5751ac022dd987260ec225b 359 Gene3D G3DSA:3.40.50.2000 148 339 6.5E-31 T 11-10-2018 ABE28_012550 04a19536f5751ac022dd987260ec225b 359 Pfam PF00534 Glycosyl transferases group 1 166 331 3.3E-19 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_012550 04a19536f5751ac022dd987260ec225b 359 SUPERFAMILY SSF53756 6 354 2.98E-39 T 11-10-2018 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 160 7.7E-33 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 PRINTS PR00095 Anthranilate synthase component I signature 411 425 2.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 PRINTS PR00095 Anthranilate synthase component I signature 396 410 2.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 PRINTS PR00095 Anthranilate synthase component I signature 316 329 2.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 PRINTS PR00095 Anthranilate synthase component I signature 302 315 2.5E-21 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 20 461 2.3E-169 T 11-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 Pfam PF00425 chorismate binding enzyme 201 454 2.4E-97 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 Gene3D G3DSA:3.60.120.10 1 464 1.1E-165 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_007195 f444be2c5ea90dd8590fc1beb6e4b0c7 464 SUPERFAMILY SSF56322 14 460 4.97E-146 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_016630 f1762d38938ad0e1f39e6d087e8d01a0 203 Gene3D G3DSA:3.90.950.10 1 196 9.4E-77 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016630 f1762d38938ad0e1f39e6d087e8d01a0 203 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 195 49.138 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 ABE28_016630 f1762d38938ad0e1f39e6d087e8d01a0 203 SUPERFAMILY SSF52972 1 193 1.57E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016630 f1762d38938ad0e1f39e6d087e8d01a0 203 Pfam PF01725 Ham1 family 4 190 7.8E-60 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ABE28_016630 f1762d38938ad0e1f39e6d087e8d01a0 203 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 1.3E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 ABE28_006185 367c06207915d81d503559d0dacaeb8d 208 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 108 136 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 ABE28_006185 367c06207915d81d503559d0dacaeb8d 208 Pfam PF01464 Transglycosylase SLT domain 91 198 5.3E-32 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 ABE28_006185 367c06207915d81d503559d0dacaeb8d 208 Gene3D G3DSA:1.10.530.10 41 206 1.2E-49 T 11-10-2018 ABE28_006185 367c06207915d81d503559d0dacaeb8d 208 SUPERFAMILY SSF53955 85 204 1.06E-46 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 Gene3D G3DSA:1.20.58.340 133 254 3.1E-28 T 11-10-2018 ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 Gene3D G3DSA:3.30.460.20 2 132 1.0E-24 T 11-10-2018 ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 SUPERFAMILY SSF144083 248 310 8.24E-16 T 11-10-2018 ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 Gene3D G3DSA:1.20.58.340 256 312 2.9E-12 T 11-10-2018 ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 Pfam PF01544 CorA-like Mg2+ transporter protein 23 308 2.3E-65 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABE28_012705 0f2035b7a231437a43308e56ffdc03c5 312 SUPERFAMILY SSF143865 1 247 6.8E-54 T 11-10-2018 ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 Pfam PF01174 SNO glutamine amidotransferase family 6 187 5.5E-64 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 Gene3D G3DSA:3.40.50.880 1 197 1.1E-67 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 SUPERFAMILY SSF52317 2 189 4.18E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 PIRSF PIRSF005639 1 191 2.1E-69 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 35.735 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 11-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012105 857c7a35f433935922c87f32ba2ea549 199 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 1.2E-70 T 11-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_010130 eda990a7d61c1dd81ba7c48daf4cc8f4 448 SUPERFAMILY SSF103473 21 429 7.98E-34 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010130 eda990a7d61c1dd81ba7c48daf4cc8f4 448 Pfam PF07690 Major Facilitator Superfamily 20 322 6.4E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_010130 eda990a7d61c1dd81ba7c48daf4cc8f4 448 Gene3D G3DSA:1.20.1250.20 241 434 2.3E-42 T 11-10-2018 ABE28_010130 eda990a7d61c1dd81ba7c48daf4cc8f4 448 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 19 428 6.7E-94 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 ABE28_010130 eda990a7d61c1dd81ba7c48daf4cc8f4 448 Gene3D G3DSA:1.20.1250.20 17 234 1.8E-46 T 11-10-2018 ABE28_017210 c45600029bc588cb31588d39f5677875 543 Gene3D G3DSA:3.10.310.70 79 197 1.8E-126 T 11-10-2018 ABE28_017210 c45600029bc588cb31588d39f5677875 543 SUPERFAMILY SSF51556 60 488 2.47E-37 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_017210 c45600029bc588cb31588d39f5677875 543 SUPERFAMILY SSF51338 3 530 4.65E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_017210 c45600029bc588cb31588d39f5677875 543 Gene3D G3DSA:3.20.20.140 61 488 1.8E-126 T 11-10-2018 ABE28_017210 c45600029bc588cb31588d39f5677875 543 Pfam PF07969 Amidohydrolase family 49 528 1.7E-115 T 11-10-2018 IPR013108 Amidohydrolase 3 ABE28_017210 c45600029bc588cb31588d39f5677875 543 Gene3D G3DSA:2.30.40.10 7 505 1.8E-126 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_012670 7543dd3c536ea77e6b69dd57b666e4c2 199 SUPERFAMILY SSF55469 4 198 8.51E-65 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_012670 7543dd3c536ea77e6b69dd57b666e4c2 199 Gene3D G3DSA:3.40.109.10 2 199 6.9E-83 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_012670 7543dd3c536ea77e6b69dd57b666e4c2 199 Pfam PF00881 Nitroreductase family 9 178 2.8E-17 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_019655 475b84ef205d11337426e1e962157222 362 Pfam PF05145 Transition state regulatory protein AbrB 26 344 6.8E-83 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABE28_019655 475b84ef205d11337426e1e962157222 362 PIRSF PIRSF038991 1 352 3.5E-89 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABE28_019655 475b84ef205d11337426e1e962157222 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 3 157 7.5E-39 T 11-10-2018 IPR017516 AbrB duplication ABE28_019655 475b84ef205d11337426e1e962157222 362 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 189 343 7.6E-35 T 11-10-2018 IPR017516 AbrB duplication ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 SMART SM00857 3 151 1.6E-60 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 Gene3D G3DSA:1.10.10.2600 135 261 1.3E-22 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 Gene3D G3DSA:3.40.50.1390 1 133 6.7E-47 T 11-10-2018 ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 Pfam PF00239 Resolvase, N terminal domain 3 150 9.6E-43 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 SUPERFAMILY SSF53041 1 150 3.53E-40 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABE28_020720 c2a3e2431db9a0312ecb0061501a25b4 455 Pfam PF07508 Recombinase 172 258 1.4E-18 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 Pfam PF02595 Glycerate kinase family 3 372 6.4E-134 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 373 1.1E-140 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 Gene3D G3DSA:3.40.50.10350 1 360 2.1E-132 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 PIRSF PIRSF006078 1 376 9.1E-127 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 Gene3D G3DSA:3.90.1510.10 42 276 2.1E-132 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 ABE28_006475 84345da624cbbdedf2e8c0a7467b268a 381 SUPERFAMILY SSF110738 1 372 2.09E-128 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 ABE28_011410 0691164c8ef77ca19fbf805a6058f8f5 75 SUPERFAMILY SSF158430 4 68 3.79E-14 T 11-10-2018 ABE28_011410 0691164c8ef77ca19fbf805a6058f8f5 75 Gene3D G3DSA:1.20.1260.120 1 74 7.0E-19 T 11-10-2018 ABE28_011410 0691164c8ef77ca19fbf805a6058f8f5 75 Pfam PF11155 Domain of unknown function (DUF2935) 4 53 5.3E-8 T 11-10-2018 IPR021328 Protein of unknown function DUF2935 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 SUPERFAMILY SSF55604 6 81 2.09E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 529 541 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 Gene3D G3DSA:3.30.1360.60 1 77 5.6E-28 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 611 1.0E-200 T 11-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 Gene3D G3DSA:2.70.70.10 454 612 3.0E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 Pfam PF00367 phosphotransferase system, EIIB 13 41 4.1E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 SUPERFAMILY SSF51261 462 611 2.96E-54 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 466 590 8.0E-51 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 Pfam PF02378 Phosphotransferase system, EIIC 108 386 1.5E-24 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 467 587 3.5E-45 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_023920 1b1d67e252e4636d12f2350c1307027c 614 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_016480 68f550c868856d0ececcb16fa3594188 193 Gene3D G3DSA:3.40.50.300 1 193 8.0E-53 T 11-10-2018 ABE28_016480 68f550c868856d0ececcb16fa3594188 193 SUPERFAMILY SSF52540 2 192 3.55E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016480 68f550c868856d0ececcb16fa3594188 193 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.782 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABE28_016480 68f550c868856d0ececcb16fa3594188 193 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 189 6.4E-68 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 ABE28_016480 68f550c868856d0ececcb16fa3594188 193 Pfam PF01926 50S ribosome-binding GTPase 26 143 7.9E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 72 4.9E-14 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 SUPERFAMILY SSF53697 83 236 8.64E-32 T 11-10-2018 ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 Pfam PF01380 SIS domain 107 225 4.4E-13 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 SUPERFAMILY SSF46689 4 74 1.43E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 Gene3D G3DSA:1.10.10.10 3 73 4.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011605 b04064e477f7d36b5756ee7ef5da5e9b 238 Gene3D G3DSA:3.40.50.10490 79 238 2.5E-31 T 11-10-2018 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 SUPERFAMILY SSF48179 206 325 1.96E-20 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 9.3E-45 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 SUPERFAMILY SSF52096 482 791 4.98E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 305 3.8E-9 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 363 409 2.0E-4 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Gene3D G3DSA:1.10.1040.10 359 478 5.8E-7 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Gene3D G3DSA:1.10.1040.10 209 332 5.7E-18 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Gene3D G3DSA:3.40.50.720 2 208 4.8E-65 T 11-10-2018 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Gene3D G3DSA:3.90.226.10 483 681 2.9E-28 T 11-10-2018 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 Pfam PF00378 Enoyl-CoA hydratase/isomerase 487 624 1.9E-9 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 SUPERFAMILY SSF51735 4 206 3.42E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021815 5ea097d7260a2ca5d06d0d2e263b023f 794 SUPERFAMILY SSF48179 357 449 6.46E-17 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 SMART SM00382 53 242 1.3E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 Pfam PF00571 CBS domain 335 389 3.5E-8 T 11-10-2018 IPR000644 CBS domain ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 Pfam PF00571 CBS domain 278 329 1.6E-4 T 11-10-2018 IPR000644 CBS domain ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 Gene3D G3DSA:3.40.50.300 5 269 2.1E-71 T 11-10-2018 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 Gene3D G3DSA:3.10.580.10 278 390 1.3E-18 T 11-10-2018 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 Pfam PF00005 ABC transporter 44 192 6.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 392 4.2E-148 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 SUPERFAMILY SSF54631 274 390 5.94E-21 T 11-10-2018 ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 SUPERFAMILY SSF52540 36 270 5.32E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 SMART SM00116 282 330 0.17 T 11-10-2018 IPR000644 CBS domain ABE28_001720 fbc07e07216225e213ced3d7f9a5cb06 401 SMART SM00116 342 389 3.3 T 11-10-2018 IPR000644 CBS domain ABE28_000255 25c70570a9a163e2600f32c9fbf9cd4e 251 SMART SM00382 32 206 5.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000255 25c70570a9a163e2600f32c9fbf9cd4e 251 Pfam PF00005 ABC transporter 23 156 6.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_000255 25c70570a9a163e2600f32c9fbf9cd4e 251 SUPERFAMILY SSF52540 8 219 1.46E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000255 25c70570a9a163e2600f32c9fbf9cd4e 251 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_000255 25c70570a9a163e2600f32c9fbf9cd4e 251 Gene3D G3DSA:3.40.50.300 6 239 3.0E-64 T 11-10-2018 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 SUPERFAMILY SSF56601 314 686 7.77E-66 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 Gene3D G3DSA:1.10.10.1230 86 187 2.9E-232 T 11-10-2018 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 Gene3D G3DSA:3.90.1310.30 61 568 2.9E-232 T 11-10-2018 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 296 1.4E-35 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 Pfam PF00905 Penicillin binding protein transpeptidase domain 345 679 9.7E-70 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 SUPERFAMILY SSF56519 57 312 6.28E-35 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_015255 efc88af80e9c856c699efbedb860ade5 725 Gene3D G3DSA:3.40.710.10 312 664 2.9E-232 T 11-10-2018 ABE28_017860 7ad0f613947794fb22c86ee878822dde 451 PRINTS PR00758 Arsenical pump membrane protein signature 105 129 4.1E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_017860 7ad0f613947794fb22c86ee878822dde 451 PRINTS PR00758 Arsenical pump membrane protein signature 344 366 4.1E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_017860 7ad0f613947794fb22c86ee878822dde 451 PRINTS PR00758 Arsenical pump membrane protein signature 385 410 4.1E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_017860 7ad0f613947794fb22c86ee878822dde 451 PRINTS PR00758 Arsenical pump membrane protein signature 418 442 4.1E-25 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_017860 7ad0f613947794fb22c86ee878822dde 451 Pfam PF02040 Arsenical pump membrane protein 7 446 1.9E-71 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 585 34.95 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 195 207 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 212 225 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 1.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 583 2.6E-262 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 558 1.9E-110 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Gene3D G3DSA:3.30.930.10 123 579 7.7E-197 T 11-10-2018 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 SUPERFAMILY SSF55681 117 584 6.32E-109 T 11-10-2018 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 6.5E-17 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Gene3D G3DSA:2.40.50.140 1 109 6.8E-33 T 11-10-2018 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 SUPERFAMILY SSF50249 4 108 5.71E-31 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Gene3D G3DSA:3.30.1360.30 277 420 7.7E-197 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 SUPERFAMILY SSF55261 294 420 3.92E-42 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 ABE28_016140 241f8c6da77204f801ed523d9916a7aa 589 Pfam PF02938 GAD domain 313 406 3.4E-30 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 6.4E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 Gene3D G3DSA:3.40.50.300 3 322 4.7E-105 T 11-10-2018 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 SMART SM00382 41 233 4.0E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 Pfam PF00005 ABC transporter 33 183 3.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 1.6E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_022680 c963c5d3f9e8dd2c774fa28b697909d6 322 SUPERFAMILY SSF52540 5 255 9.26E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Gene3D G3DSA:3.40.50.980 34 208 5.1E-120 T 11-10-2018 ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Gene3D G3DSA:3.30.300.310 438 539 4.5E-32 T 11-10-2018 ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 451 526 2.0E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 SUPERFAMILY SSF56801 4 540 3.27E-155 T 11-10-2018 ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 192 203 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Gene3D G3DSA:2.30.38.10 352 435 5.1E-120 T 11-10-2018 ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Pfam PF00501 AMP-binding enzyme 11 442 2.1E-108 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_010980 ec0d3d141c2d6991b77f51f3f17506de 545 Gene3D G3DSA:3.40.50.980 31 351 5.1E-120 T 11-10-2018 ABE28_005360 1f381683ec694258c1f7be55d3885797 669 SUPERFAMILY SSF56601 210 612 3.02E-108 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_005360 1f381683ec694258c1f7be55d3885797 669 SUPERFAMILY SSF53955 43 249 2.76E-72 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_005360 1f381683ec694258c1f7be55d3885797 669 Gene3D G3DSA:3.40.710.10 258 611 2.8E-126 T 11-10-2018 ABE28_005360 1f381683ec694258c1f7be55d3885797 669 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 66 610 4.7E-189 T 11-10-2018 ABE28_005360 1f381683ec694258c1f7be55d3885797 669 Pfam PF00905 Penicillin binding protein transpeptidase domain 329 604 2.6E-38 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_005360 1f381683ec694258c1f7be55d3885797 669 Pfam PF00912 Transglycosylase 55 228 1.5E-64 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_005360 1f381683ec694258c1f7be55d3885797 669 Gene3D G3DSA:1.10.3810.10 47 244 1.8E-76 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 1.7E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 SUPERFAMILY SSF56801 21 529 3.01E-148 T 11-10-2018 ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 Gene3D G3DSA:3.30.300.310 432 533 8.7E-31 T 11-10-2018 ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 Gene3D G3DSA:3.40.50.12780 14 431 1.1E-118 T 11-10-2018 ABE28_010080 5cd00d40a57a0a50b57b37e171723253 537 Pfam PF00501 AMP-binding enzyme 32 435 7.3E-102 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_002980 086efed1b657622b523d72696e19befc 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_002980 086efed1b657622b523d72696e19befc 304 SUPERFAMILY SSF46785 1 82 2.57E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002980 086efed1b657622b523d72696e19befc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_002980 086efed1b657622b523d72696e19befc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_002980 086efed1b657622b523d72696e19befc 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_002980 086efed1b657622b523d72696e19befc 304 Gene3D G3DSA:3.40.190.10 161 262 3.4E-27 T 11-10-2018 ABE28_002980 086efed1b657622b523d72696e19befc 304 Pfam PF03466 LysR substrate binding domain 89 268 3.3E-28 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_002980 086efed1b657622b523d72696e19befc 304 SUPERFAMILY SSF53850 90 270 2.81E-28 T 11-10-2018 ABE28_002980 086efed1b657622b523d72696e19befc 304 Gene3D G3DSA:3.40.190.10 90 263 3.4E-27 T 11-10-2018 ABE28_002980 086efed1b657622b523d72696e19befc 304 Gene3D G3DSA:1.10.10.10 1 89 1.1E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 SUPERFAMILY SSF52402 20 201 2.32E-49 T 11-10-2018 ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 Gene3D G3DSA:3.40.50.620 17 238 2.4E-72 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 42 213 2.7E-48 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 28 236 2.9E-88 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 PIRSF PIRSF000857 9 238 3.8E-86 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 4 237 39.247 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 ABE28_012090 73b9b0de4794ff9c3726a1e2270f4cdc 238 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 47 235 3.5E-72 T 11-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 Gene3D G3DSA:3.30.360.10 128 335 8.2E-103 T 11-10-2018 ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 Gene3D G3DSA:3.40.50.720 7 314 8.2E-103 T 11-10-2018 ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 250 6.3E-8 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 SUPERFAMILY SSF51735 3 155 7.41E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 SUPERFAMILY SSF55347 129 291 5.72E-34 T 11-10-2018 ABE28_002250 66223f714be115dd836b27c4f5a11c59 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 3.0E-35 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_010160 6618e273b3fc202a813751a017341f11 191 SUPERFAMILY SSF52821 85 183 2.75E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_010160 6618e273b3fc202a813751a017341f11 191 Pfam PF01206 Sulfurtransferase TusA 9 75 2.7E-20 T 11-10-2018 IPR001455 TusA-like domain ABE28_010160 6618e273b3fc202a813751a017341f11 191 Gene3D G3DSA:3.40.250.10 88 186 8.8E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_010160 6618e273b3fc202a813751a017341f11 191 SUPERFAMILY SSF64307 5 76 2.22E-21 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_010160 6618e273b3fc202a813751a017341f11 191 SMART SM00450 92 187 2.2E-21 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_010160 6618e273b3fc202a813751a017341f11 191 Pfam PF00581 Rhodanese-like domain 96 182 5.4E-15 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_010160 6618e273b3fc202a813751a017341f11 191 Gene3D G3DSA:3.30.110.40 1 78 3.1E-27 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SUPERFAMILY SSF47226 24 86 3.27E-6 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SUPERFAMILY SSF52172 107 241 3.13E-28 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Gene3D G3DSA:3.40.50.2300 115 228 2.9E-24 T 11-10-2018 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Gene3D G3DSA:3.30.70.270 229 395 3.4E-52 T 11-10-2018 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SUPERFAMILY SSF55073 241 395 7.14E-46 T 11-10-2018 IPR029787 Nucleotide cyclase ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Gene3D G3DSA:1.20.120.160 6 114 1.5E-5 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Pfam PF01627 Hpt domain 16 64 4.9E-5 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SUPERFAMILY SSF52172 402 532 3.27E-25 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SMART SM00267 222 397 4.3E-55 T 11-10-2018 IPR000160 GGDEF domain ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 392 1.1E-45 T 11-10-2018 IPR000160 GGDEF domain ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SMART SM00448 407 527 1.8E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 SMART SM00448 109 222 5.3E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Gene3D G3DSA:3.40.50.2300 396 534 2.1E-25 T 11-10-2018 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 236 395 6.7E-51 T 11-10-2018 IPR000160 GGDEF domain ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Pfam PF00072 Response regulator receiver domain 111 221 4.1E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012860 1266bb0c2fed34a2611e9fcb243232e5 535 Pfam PF00072 Response regulator receiver domain 409 528 6.9E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 285 8.2E-19 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 Gene3D G3DSA:3.30.70.1350 206 287 6.3E-16 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 SUPERFAMILY SSF161111 9 207 1.22E-50 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 SUPERFAMILY SSF160240 209 286 5.89E-18 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 9 285 5.0E-66 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 Pfam PF01545 Cation efflux family 13 205 2.7E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_005350 b89f750992cfbc4e7dbeff11177d9c34 295 Gene3D G3DSA:1.20.1510.10 8 205 2.7E-52 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SMART SM00956 404 507 8.0E-40 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF16124 RecQ zinc-binding 334 396 1.9E-16 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF00271 Helicase conserved C-terminal domain 219 322 1.6E-18 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF00270 DEAD/DEAH box helicase 20 180 1.1E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 456 1.9E-146 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF14493 Helix-turn-helix domain 610 698 2.1E-21 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF09382 RQC domain 401 508 3.9E-32 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SMART SM00487 13 210 1.6E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SUPERFAMILY SSF47819 513 589 6.98E-24 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Pfam PF00570 HRDC domain 517 581 7.9E-21 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Gene3D G3DSA:3.40.50.300 201 332 4.1E-41 T 11-10-2018 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 5 583 4.7E-240 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Gene3D G3DSA:1.10.150.80 510 591 4.8E-22 T 11-10-2018 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Gene3D G3DSA:3.40.50.300 1 200 9.7E-76 T 11-10-2018 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SMART SM00341 512 592 3.7E-18 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SMART SM00490 242 323 4.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SUPERFAMILY SSF52540 57 344 3.72E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 SUPERFAMILY SSF46785 395 537 1.9E-34 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012820 76738ae0b0310ac2fcbd426a5af3a9bc 706 Gene3D G3DSA:1.10.10.10 333 509 5.4E-48 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 Pfam PF04002 RadC-like JAB domain 103 222 1.3E-48 T 11-10-2018 IPR025657 RadC-like JAB domain ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 SUPERFAMILY SSF102712 153 191 4.45E-5 T 11-10-2018 ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 SUPERFAMILY SSF47781 15 90 3.06E-7 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 TIGRFAM TIGR00608 radc: DNA repair protein RadC 11 224 1.2E-83 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 Pfam PF00633 Helix-hairpin-helix motif 60 84 6.5E-6 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 Gene3D G3DSA:3.40.140.10 100 224 4.3E-49 T 11-10-2018 ABE28_016390 430357f4a8c0ddf688dc7e47fda7a685 224 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 173 178 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site ABE28_013410 4b7a3daac95b2fc929084341bf767d11 146 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 1.4E-62 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_013410 4b7a3daac95b2fc929084341bf767d11 146 Pfam PF06491 Disulphide isomerase 8 143 7.1E-59 T 11-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family ABE28_013410 4b7a3daac95b2fc929084341bf767d11 146 Gene3D G3DSA:3.40.30.10 25 144 2.5E-49 T 11-10-2018 ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 Gene3D G3DSA:3.40.50.1100 116 238 6.3E-183 T 11-10-2018 ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 Gene3D G3DSA:3.40.50.1100 27 440 6.3E-183 T 11-10-2018 ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 74 394 1.2E-53 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 16 440 3.0E-198 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 SUPERFAMILY SSF53686 71 440 2.47E-53 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 108 122 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 ABE28_012120 b701a5bc489919c8d4ece0b60338deec 443 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 443 227.411 T 11-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 ProSitePatterns PS01176 Initiation factor 2 signature. 670 692 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Pfam PF11987 Translation-initiation factor 2 505 609 3.3E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Gene3D G3DSA:2.40.30.10 621 718 2.7E-34 T 11-10-2018 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 135 717 4.2E-279 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 SUPERFAMILY SSF52156 497 626 4.45E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Gene3D G3DSA:1.10.10.2480 1 67 1.4E-15 T 11-10-2018 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 SUPERFAMILY SSF50447 392 474 1.37E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.1E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 145 191 1.2E-13 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Gene3D G3DSA:3.40.50.10050 513 620 4.1E-39 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 SUPERFAMILY SSF50447 620 717 9.77E-33 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 221 378 9.5E-40 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 717 17.521 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Pfam PF00009 Elongation factor Tu GTP binding domain 224 379 1.5E-36 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 SUPERFAMILY SSF52540 214 390 8.56E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Gene3D G3DSA:3.40.50.300 216 390 2.2E-75 T 11-10-2018 ABE28_008165 d7b95f43539cf901a53a313fdece6f24 718 Gene3D G3DSA:2.40.30.10 391 508 4.2E-43 T 11-10-2018 ABE28_019435 6f0f5a88ed58285872a249bebd0ea4b5 502 Gene3D G3DSA:3.20.20.140 63 384 4.3E-93 T 11-10-2018 ABE28_019435 6f0f5a88ed58285872a249bebd0ea4b5 502 SUPERFAMILY SSF51556 61 387 7.23E-44 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_019435 6f0f5a88ed58285872a249bebd0ea4b5 502 SUPERFAMILY SSF51338 3 458 5.67E-30 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019435 6f0f5a88ed58285872a249bebd0ea4b5 502 Pfam PF01979 Amidohydrolase family 59 434 3.8E-27 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_019435 6f0f5a88ed58285872a249bebd0ea4b5 502 Gene3D G3DSA:2.30.40.10 10 441 4.3E-93 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_022810 2d0d6229975496f5b00e6baaa6704de2 335 SUPERFAMILY SSF143243 197 333 1.01E-39 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022810 2d0d6229975496f5b00e6baaa6704de2 335 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 266 321 5.0E-15 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022810 2d0d6229975496f5b00e6baaa6704de2 335 Gene3D G3DSA:3.30.460.80 162 312 1.2E-32 T 11-10-2018 IPR037232 NADH:ubiquinone oxidoreductase, 30kDa subunit superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022810 2d0d6229975496f5b00e6baaa6704de2 335 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 215 329 1.9E-36 T 11-10-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 8 23 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 114 134 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 100 113 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 143 160 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 195 207 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 79 95 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 169 180 3.9E-48 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 Gene3D G3DSA:3.90.110.10 173 446 2.5E-96 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_013680 ab484ed42d094590329902f40d819d48 449 Gene3D G3DSA:3.40.50.720 2 172 1.9E-70 T 11-10-2018 ABE28_013680 ab484ed42d094590329902f40d819d48 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 414 4.4E-46 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 ABE28_013680 ab484ed42d094590329902f40d819d48 449 Pfam PF02056 Family 4 glycosyl hydrolase 8 189 1.7E-70 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 143 174 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 ABE28_013680 ab484ed42d094590329902f40d819d48 449 SUPERFAMILY SSF51735 6 170 8.87E-54 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_013680 ab484ed42d094590329902f40d819d48 449 SUPERFAMILY SSF56327 175 439 4.39E-88 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 Gene3D G3DSA:3.40.630.10 13 341 1.2E-121 T 11-10-2018 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 PIRSF PIRSF001123 4 344 7.5E-37 T 11-10-2018 IPR008007 Peptidase M42 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 Gene3D G3DSA:2.40.30.40 76 170 1.2E-121 T 11-10-2018 IPR023367 Peptidase M42, domain 2 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 Pfam PF05343 M42 glutamyl aminopeptidase 48 336 6.9E-84 T 11-10-2018 IPR008007 Peptidase M42 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 SUPERFAMILY SSF53187 6 343 1.23E-51 T 11-10-2018 ABE28_006700 6ea25b46be5f0858bf5cd5befd0da11d 346 SUPERFAMILY SSF101821 73 185 3.82E-31 T 11-10-2018 ABE28_015630 2e1b577c4ccf72b2aed7d4405a22d4c3 261 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 257 8.0E-52 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABE28_015630 2e1b577c4ccf72b2aed7d4405a22d4c3 261 Pfam PF02666 Phosphatidylserine decarboxylase 59 256 2.1E-52 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 ABE28_015630 2e1b577c4ccf72b2aed7d4405a22d4c3 261 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 7 259 36.101 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 SUPERFAMILY SSF51645 6 529 3.53E-194 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 Gene3D G3DSA:3.20.20.360 3 407 4.6E-194 T 11-10-2018 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 Pfam PF01274 Malate synthase 9 529 1.3E-209 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 21 529 1.4E-243 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 PIRSF PIRSF001363 1 530 2.0E-258 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_016980 3cd9655c5e7755efcd56963032d423d0 530 Gene3D G3DSA:1.20.1220.12 408 529 2.1E-49 T 11-10-2018 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Gene3D G3DSA:3.40.1190.10 102 308 9.3E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Gene3D G3DSA:3.40.50.720 10 95 7.6E-32 T 11-10-2018 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 449 35.958 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 SUPERFAMILY SSF53623 103 308 6.28E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 SUPERFAMILY SSF51984 10 100 1.1E-17 T 11-10-2018 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Gene3D G3DSA:3.90.190.20 315 448 3.6E-42 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 SUPERFAMILY SSF53244 310 449 5.95E-41 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 447 1.3E-132 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Pfam PF08245 Mur ligase middle domain 117 291 4.2E-33 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_007510 4335e58b5e194ca25c105bd129768824 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 378 2.4E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_015980 e253607c9e864796afb70fb8bc1fba86 398 Gene3D G3DSA:3.90.550.10 1 255 2.6E-11 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015980 e253607c9e864796afb70fb8bc1fba86 398 Pfam PF00535 Glycosyl transferase family 2 6 134 1.1E-8 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_015980 e253607c9e864796afb70fb8bc1fba86 398 SUPERFAMILY SSF53448 4 214 6.27E-21 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_004725 fe631e9cf1a5d74351ae9e3e03ad4f0a 181 SUPERFAMILY SSF52218 1 177 9.72E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_004725 fe631e9cf1a5d74351ae9e3e03ad4f0a 181 Pfam PF03358 NADPH-dependent FMN reductase 1 145 1.1E-34 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_004725 fe631e9cf1a5d74351ae9e3e03ad4f0a 181 Gene3D G3DSA:3.40.50.360 1 181 3.5E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 Pfam PF09339 IclR helix-turn-helix domain 9 59 3.5E-8 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 Pfam PF01614 Bacterial transcriptional regulator 124 246 4.2E-22 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 SUPERFAMILY SSF55781 73 251 1.18E-31 T 11-10-2018 ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 SMART SM00346 7 100 1.0E-6 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 Gene3D G3DSA:3.30.450.40 86 253 2.3E-37 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 SUPERFAMILY SSF46785 7 80 5.56E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018955 5a3cb838eb9b4c42566b2d98e1deaf40 264 Gene3D G3DSA:1.10.10.10 2 78 2.2E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 PIRSF PIRSF004846 2 264 4.7E-96 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 SUPERFAMILY SSF53850 38 261 1.44E-70 T 11-10-2018 ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 Gene3D G3DSA:3.40.190.10 40 260 7.2E-82 T 11-10-2018 ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 44 259 2.4E-71 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 Gene3D G3DSA:3.40.190.10 118 223 7.2E-82 T 11-10-2018 ABE28_020405 72312e67c82ba6bff676024fb451ea49 264 Pfam PF13531 Bacterial extracellular solute-binding protein 39 261 1.0E-54 T 11-10-2018 ABE28_012080 a16a34e6110febeb95247eb8580050d6 199 Gene3D G3DSA:3.40.50.300 3 199 4.2E-83 T 11-10-2018 ABE28_012080 a16a34e6110febeb95247eb8580050d6 199 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 25 197 39.136 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012080 a16a34e6110febeb95247eb8580050d6 199 SUPERFAMILY SSF52540 23 194 3.6E-41 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012080 a16a34e6110febeb95247eb8580050d6 199 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 9 193 1.0E-86 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012080 a16a34e6110febeb95247eb8580050d6 199 Pfam PF01583 Adenylylsulphate kinase 27 179 7.2E-72 T 11-10-2018 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PIRSF PIRSF000722 1 399 1.2E-151 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 Hamap MF_00020 Acetate kinase [ackA]. 1 399 192.503 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 5.4E-170 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 Gene3D G3DSA:3.30.420.40 195 402 3.6E-83 T 11-10-2018 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 Pfam PF00871 Acetokinase family 3 389 8.3E-164 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 Gene3D G3DSA:3.30.420.40 2 194 5.1E-73 T 11-10-2018 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 SUPERFAMILY SSF53067 157 394 1.01E-90 T 11-10-2018 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 SUPERFAMILY SSF53067 1 194 7.77E-70 T 11-10-2018 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 172 185 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 299 312 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 376 388 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 202 223 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 321 337 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_017110 e59a7d505f31b3be0c065c6af149f3ab 405 PRINTS PR00471 Acetate kinase family signature 4 15 7.5E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 ABE28_019165 dad42d2bf9796ebece6d245ddedfbdaf 216 SUPERFAMILY SSF161098 7 200 2.09E-45 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019165 dad42d2bf9796ebece6d245ddedfbdaf 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 202 5.1E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019165 dad42d2bf9796ebece6d245ddedfbdaf 216 Gene3D G3DSA:1.10.3720.10 4 216 2.3E-48 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018350 3ad8372698bfb6691afee104d5fca619 151 SUPERFAMILY SSF88697 1 147 1.91E-50 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_018350 3ad8372698bfb6691afee104d5fca619 151 SMART SM01022 27 147 4.3E-40 T 11-10-2018 IPR007374 ASCH domain ABE28_018350 3ad8372698bfb6691afee104d5fca619 151 PIRSF PIRSF021320 1 150 1.6E-51 T 11-10-2018 IPR009326 Protein of unknown function DUF984 ABE28_018350 3ad8372698bfb6691afee104d5fca619 151 Gene3D G3DSA:3.10.400.10 1 151 7.8E-57 T 11-10-2018 ABE28_018350 3ad8372698bfb6691afee104d5fca619 151 Pfam PF04266 ASCH domain 27 146 1.3E-25 T 11-10-2018 IPR007374 ASCH domain ABE28_011000 d5d78f95273f2a4cdafc2cc3be39c175 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 12 260 2.2E-70 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_011000 d5d78f95273f2a4cdafc2cc3be39c175 260 Gene3D G3DSA:3.90.226.10 2 202 3.1E-73 T 11-10-2018 ABE28_011000 d5d78f95273f2a4cdafc2cc3be39c175 260 Gene3D G3DSA:1.10.12.10 203 260 2.0E-26 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_011000 d5d78f95273f2a4cdafc2cc3be39c175 260 SUPERFAMILY SSF52096 5 259 4.55E-86 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_011000 d5d78f95273f2a4cdafc2cc3be39c175 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_016560 9e46a14aa7ae1e7e9fa486a75a7e9125 97 Gene3D G3DSA:3.40.630.30 11 97 3.0E-26 T 11-10-2018 ABE28_016560 9e46a14aa7ae1e7e9fa486a75a7e9125 97 Pfam PF14542 GCN5-related N-acetyl-transferase 17 94 1.6E-22 T 11-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase ABE28_016560 9e46a14aa7ae1e7e9fa486a75a7e9125 97 SUPERFAMILY SSF55729 14 95 1.77E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 3.1E-17 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Pfam PF03129 Anticodon binding domain 549 639 3.8E-26 T 11-10-2018 IPR004154 Anticodon-binding ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 SUPERFAMILY SSF55681 245 534 2.49E-95 T 11-10-2018 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Gene3D G3DSA:3.30.980.10 72 224 9.4E-67 T 11-10-2018 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 2.9E-240 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 326 537 8.3E-32 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 SUPERFAMILY SSF52954 535 641 8.16E-33 T 11-10-2018 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 SUPERFAMILY SSF55186 68 243 2.09E-66 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 2.4E-47 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Gene3D G3DSA:3.30.54.20 133 189 9.4E-67 T 11-10-2018 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Gene3D G3DSA:3.40.50.800 541 643 5.9E-36 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 SUPERFAMILY SSF81271 6 64 1.96E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Gene3D G3DSA:3.30.930.10 227 540 1.2E-117 T 11-10-2018 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Gene3D G3DSA:3.10.20.30 2 65 3.8E-25 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 SMART SM00863 172 221 8.3E-26 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Pfam PF02824 TGS domain 6 64 5.4E-13 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABE28_016875 62903ecf717935a84387abf3fdfc79da 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.22 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 ABE28_008470 5a15339fa9b0ebe35ab89d603ec7e452 315 Gene3D G3DSA:3.90.850.10 99 314 1.3E-84 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_008470 5a15339fa9b0ebe35ab89d603ec7e452 315 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 104 308 1.2E-70 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_008470 5a15339fa9b0ebe35ab89d603ec7e452 315 SUPERFAMILY SSF56529 93 308 7.98E-81 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_004440 3d66ee50619f54850a3f540c31f0ead2 497 SUPERFAMILY SSF53720 4 486 1.13E-175 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_004440 3d66ee50619f54850a3f540c31f0ead2 497 Gene3D G3DSA:3.40.605.10 18 477 1.3E-185 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_004440 3d66ee50619f54850a3f540c31f0ead2 497 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_004440 3d66ee50619f54850a3f540c31f0ead2 497 Gene3D G3DSA:3.40.309.10 260 453 1.3E-185 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_004440 3d66ee50619f54850a3f540c31f0ead2 497 Pfam PF00171 Aldehyde dehydrogenase family 19 483 6.0E-182 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 Gene3D G3DSA:1.10.600.10 7 320 4.3E-97 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 SUPERFAMILY SSF48576 7 319 2.88E-82 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 Pfam PF00348 Polyprenyl synthetase 31 263 4.7E-66 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 1.2E-159 T 11-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 ABE28_014270 39152e71a418b0d63d1dbc6d19444030 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 3.3E-57 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 56.944 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 Gene3D G3DSA:2.40.330.20 1 141 1.4E-52 T 11-10-2018 IPR038619 MraZ superfamily ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 8.0E-44 T 11-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 8.8E-22 T 11-10-2018 IPR020603 MraZ domain ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 2.0E-22 T 11-10-2018 IPR020603 MraZ domain ABE28_007475 058b79398d55b520f93b88c6d8f6ffaf 143 SUPERFAMILY SSF89447 1 136 4.6E-51 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily ABE28_006980 eb159210c58e2960d42675cc099a2868 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.4E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 eb159210c58e2960d42675cc099a2868 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.4E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 eb159210c58e2960d42675cc099a2868 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.4E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 eb159210c58e2960d42675cc099a2868 88 SUPERFAMILY SSF55594 1 83 9.42E-28 T 11-10-2018 IPR035895 HPr-like superfamily ABE28_006980 eb159210c58e2960d42675cc099a2868 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ABE28_006980 eb159210c58e2960d42675cc099a2868 88 Pfam PF00381 PTS HPr component phosphorylation site 2 81 6.3E-30 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 eb159210c58e2960d42675cc099a2868 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.8E-32 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_006980 eb159210c58e2960d42675cc099a2868 88 Gene3D G3DSA:3.30.1340.10 1 88 1.2E-35 T 11-10-2018 IPR035895 HPr-like superfamily ABE28_006980 eb159210c58e2960d42675cc099a2868 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site ABE28_001125 c5ae58907f512bfc946ed42984289b21 276 SUPERFAMILY SSF52540 3 229 3.89E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001125 c5ae58907f512bfc946ed42984289b21 276 Gene3D G3DSA:3.40.50.300 1 255 5.1E-65 T 11-10-2018 ABE28_001125 c5ae58907f512bfc946ed42984289b21 276 Pfam PF00005 ABC transporter 20 167 4.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_001125 c5ae58907f512bfc946ed42984289b21 276 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_001125 c5ae58907f512bfc946ed42984289b21 276 SMART SM00382 28 249 1.8E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_014765 6e7aedd4f9018a54bf917abc831e5a38 272 Gene3D G3DSA:1.10.600.10 2 272 1.0E-61 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_014765 6e7aedd4f9018a54bf917abc831e5a38 272 Pfam PF00494 Squalene/phytoene synthase 17 199 7.0E-25 T 11-10-2018 ABE28_014765 6e7aedd4f9018a54bf917abc831e5a38 272 SUPERFAMILY SSF48576 11 259 1.42E-44 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_003870 37182a22c14d6bffc41a1ffbb11b1ec6 388 Gene3D G3DSA:3.40.50.2000 55 381 4.7E-28 T 11-10-2018 ABE28_003870 37182a22c14d6bffc41a1ffbb11b1ec6 388 Gene3D G3DSA:3.40.50.2000 196 373 4.7E-28 T 11-10-2018 ABE28_003870 37182a22c14d6bffc41a1ffbb11b1ec6 388 SUPERFAMILY SSF53756 32 385 3.05E-38 T 11-10-2018 ABE28_003870 37182a22c14d6bffc41a1ffbb11b1ec6 388 Pfam PF00534 Glycosyl transferases group 1 215 362 4.4E-17 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 Hamap MF_00740 Phosphopentomutase [deoB]. 7 391 55.653 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 Pfam PF01676 Metalloenzyme superfamily 8 382 2.5E-45 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 Gene3D G3DSA:3.30.70.1250 102 220 1.3E-176 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 SUPERFAMILY SSF143856 104 220 8.76E-51 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 SUPERFAMILY SSF53649 7 394 4.71E-79 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 Gene3D G3DSA:3.40.720.10 8 391 1.3E-176 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 PIRSF PIRSF001491 6 395 2.7E-167 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 ABE28_014630 2f4cab8e756c27e5218d4b371779c71a 395 TIGRFAM TIGR01696 deoB: phosphopentomutase 9 389 1.6E-199 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 ABE28_010545 623125e350df72b167f12571e4e40932 519 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 15 511 1.0E-163 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010545 623125e350df72b167f12571e4e40932 519 Gene3D G3DSA:1.20.200.10 206 516 2.4E-105 T 11-10-2018 ABE28_010545 623125e350df72b167f12571e4e40932 519 Pfam PF00221 Aromatic amino acid lyase 23 479 6.0E-166 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 ABE28_010545 623125e350df72b167f12571e4e40932 519 Gene3D G3DSA:1.10.275.10 7 205 8.7E-60 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_010545 623125e350df72b167f12571e4e40932 519 SUPERFAMILY SSF48557 13 509 2.35E-165 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 Gene3D G3DSA:3.60.40.10 587 824 1.0E-49 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 47 804 5.8E-261 T 11-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 SMART SM00331 593 804 8.6E-47 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 SUPERFAMILY SSF81606 598 801 7.46E-18 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 SMART SM00332 585 802 0.0011 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_000330 475273ebb6727e911739cdc97454cf08 824 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 621 803 1.4E-32 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 SMART SM01086 361 455 3.7E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 SMART SM00382 52 358 3.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 4 469 43.956 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 56 154 1.2E-6 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 SUPERFAMILY SSF52540 7 467 1.43E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Gene3D G3DSA:3.40.50.300 224 336 6.5E-25 T 11-10-2018 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Gene3D G3DSA:1.10.8.10 252 272 6.5E-25 T 11-10-2018 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 7 469 3.8E-214 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Gene3D G3DSA:1.10.8.60 361 466 2.5E-40 T 11-10-2018 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Pfam PF07724 AAA domain (Cdc48 subfamily) 213 355 1.7E-40 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 361 432 9.5E-8 T 11-10-2018 IPR019489 Clp ATPase, C-terminal ABE28_007920 c1d003e9a98fbeb94e4bd7aa0321b3ac 469 Gene3D G3DSA:3.40.50.300 5 150 8.8E-35 T 11-10-2018 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 Gene3D G3DSA:2.30.40.10 8 414 2.1E-174 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 417 43.753 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 Pfam PF01979 Amidohydrolase family 76 417 2.9E-26 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 Gene3D G3DSA:3.20.20.140 80 377 2.1E-174 T 11-10-2018 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 414 3.1E-152 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 SUPERFAMILY SSF51338 28 415 2.09E-17 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_010530 344ff5bba6b331a6068007aea3fe8a9a 419 SUPERFAMILY SSF51556 79 378 1.93E-87 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_012610 633a65874a425046a03008346515a8a4 571 Gene3D G3DSA:1.20.1560.10 1 315 1.2E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_012610 633a65874a425046a03008346515a8a4 571 Gene3D G3DSA:3.40.50.300 330 571 6.6E-93 T 11-10-2018 ABE28_012610 633a65874a425046a03008346515a8a4 571 SMART SM00382 358 544 8.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012610 633a65874a425046a03008346515a8a4 571 Pfam PF00664 ABC transporter transmembrane region 17 287 1.9E-57 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_012610 633a65874a425046a03008346515a8a4 571 SUPERFAMILY SSF90123 3 316 3.01E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_012610 633a65874a425046a03008346515a8a4 571 SUPERFAMILY SSF52540 322 569 2.5E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012610 633a65874a425046a03008346515a8a4 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_012610 633a65874a425046a03008346515a8a4 571 Pfam PF00005 ABC transporter 349 498 1.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 SMART SM00155 404 431 1.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 SMART SM00155 226 253 4.1E-6 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Gene3D G3DSA:3.30.870.10 122 305 1.3E-47 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 64 9.2E-12 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ABE28_012630 67586ac223cd678280004ea4a92f691e 491 PIRSF PIRSF000850 384 490 0.0078 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 PIRSF PIRSF000850 106 290 0.0011 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 PIRSF PIRSF000850 315 403 0.027 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 SUPERFAMILY SSF56024 278 478 5.38E-52 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Gene3D G3DSA:3.30.870.10 306 490 1.2E-32 T 11-10-2018 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Hamap MF_01916 Cardiolipin synthase. 17 491 46.84 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 14 491 7.1E-200 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Pfam PF13091 PLD-like domain 145 286 1.3E-13 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 Pfam PF13091 PLD-like domain 332 457 3.9E-27 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_012630 67586ac223cd678280004ea4a92f691e 491 SUPERFAMILY SSF56024 102 321 7.63E-56 T 11-10-2018 ABE28_015025 2511dc87ba04f49b4676d5c1a763261e 178 Pfam PF11085 Conserved membrane protein YqhR 4 163 3.9E-52 T 11-10-2018 IPR024563 Uncharacterised protein family YqhR ABE28_015025 2511dc87ba04f49b4676d5c1a763261e 178 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 1 157 1.0E-34 T 11-10-2018 IPR024563 Uncharacterised protein family YqhR ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 Gene3D G3DSA:3.30.540.10 7 309 7.6E-133 T 11-10-2018 ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 318 4.3E-152 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 PIRSF PIRSF004532 1 319 6.9E-149 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 Gene3D G3DSA:3.40.190.90 122 283 7.6E-133 T 11-10-2018 ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 8.4E-142 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 ABE28_022955 a7c6e0ce5b1b53025997fccdc2f61dc5 320 SUPERFAMILY SSF56655 1 311 2.87E-109 T 11-10-2018 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 SMART SM00863 181 223 1.2E-12 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Gene3D G3DSA:3.30.980.10 86 237 2.3E-45 T 11-10-2018 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Pfam PF02272 DHHA1 domain 259 377 4.5E-6 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Gene3D G3DSA:3.10.310.40 291 385 1.7E-7 T 11-10-2018 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Gene3D G3DSA:2.40.30.130 1 85 7.4E-24 T 11-10-2018 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Pfam PF01411 tRNA synthetases class II (A) 23 84 3.8E-7 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 SUPERFAMILY SSF50447 1 76 3.0E-16 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 SUPERFAMILY SSF55186 86 227 2.09E-34 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABE28_012865 c258c391fb83587284c7ab48d342b8c9 395 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 181 218 1.1E-11 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_021060 504cea8aa21822eb674d80b52a75ea25 369 Gene3D G3DSA:3.40.50.10540 4 320 3.0E-109 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ABE28_021060 504cea8aa21822eb674d80b52a75ea25 369 Pfam PF02515 CoA-transferase family III 4 348 3.6E-91 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 ABE28_021060 504cea8aa21822eb674d80b52a75ea25 369 Gene3D G3DSA:3.30.1540.10 214 302 3.0E-109 T 11-10-2018 ABE28_021060 504cea8aa21822eb674d80b52a75ea25 369 SUPERFAMILY SSF89796 2 363 2.35E-109 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ABE28_011805 fc5b3a946de1ee5f8fa0ae14c244f125 405 SUPERFAMILY SSF51905 2 283 1.25E-44 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011805 fc5b3a946de1ee5f8fa0ae14c244f125 405 Pfam PF01266 FAD dependent oxidoreductase 3 390 8.6E-61 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 SUPERFAMILY SSF46609 1 91 3.27E-39 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 Gene3D G3DSA:1.10.287.990 20 90 6.4E-32 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 SUPERFAMILY SSF54719 92 201 2.36E-49 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 7.2E-28 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 2.4E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 1.5E-43 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 PIRSF PIRSF000349 1 202 1.1E-87 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015265 af3793b4fe565c09f6ffa31ed57ff6ca 202 Gene3D G3DSA:2.40.500.20 91 202 9.1E-53 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_013940 67f29e97502bb446b0b5cf141356181f 437 Pfam PF00860 Permease family 9 386 1.7E-119 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_013940 67f29e97502bb446b0b5cf141356181f 437 TIGRFAM TIGR03173 pbuX: xanthine permease 12 418 4.3E-168 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 ABE28_013940 67f29e97502bb446b0b5cf141356181f 437 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 7 416 2.1E-140 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABE28_013940 67f29e97502bb446b0b5cf141356181f 437 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 333 353 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Gene3D G3DSA:1.20.58.410 1 100 1.5E-6 T 11-10-2018 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Pfam PF00472 RF-1 domain 210 319 7.6E-38 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Pfam PF03462 PCRF domain 9 202 2.2E-73 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Gene3D G3DSA:3.30.70.1660 110 340 2.8E-94 T 11-10-2018 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 SUPERFAMILY SSF75620 8 351 1.57E-131 T 11-10-2018 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 354 8.2E-167 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Gene3D G3DSA:3.30.160.20 209 295 2.8E-94 T 11-10-2018 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.955 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 ABE28_022930 6e74b228d211d5c244fd60fea53cfe3e 356 SMART SM00937 62 177 1.1E-63 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 SUPERFAMILY SSF56266 20 406 9.94E-132 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 410 135.479 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 37 410 4.0E-133 T 11-10-2018 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 Gene3D G3DSA:3.30.2330.10 197 281 4.0E-29 T 11-10-2018 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 Gene3D G3DSA:3.10.20.340 282 410 8.4E-47 T 11-10-2018 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 Gene3D G3DSA:3.60.70.12 6 196 6.0E-68 T 11-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 16 410 5.1E-153 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABE28_006025 32fb5d0bc6a695ff86c86f4ab4f282b3 410 Pfam PF01960 ArgJ family 25 410 9.7E-144 T 11-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 ABE28_015855 7e1e6ab08a95053b42d9b4af3a29c331 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 367 1.0E-162 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABE28_015855 7e1e6ab08a95053b42d9b4af3a29c331 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 365 1.6E-118 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_015855 7e1e6ab08a95053b42d9b4af3a29c331 380 Gene3D G3DSA:3.40.50.2000 192 352 4.2E-151 T 11-10-2018 ABE28_015855 7e1e6ab08a95053b42d9b4af3a29c331 380 Gene3D G3DSA:3.40.50.2000 7 363 4.2E-151 T 11-10-2018 ABE28_015855 7e1e6ab08a95053b42d9b4af3a29c331 380 SUPERFAMILY SSF53756 4 368 8.03E-135 T 11-10-2018 ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 29 207 4.8E-59 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 SUPERFAMILY SSF109709 116 221 3.14E-33 T 11-10-2018 ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 SUPERFAMILY SSF110849 32 124 5.23E-28 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 Pfam PF02195 ParB-like nuclease domain 33 121 4.7E-25 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 283 37.073 T 11-10-2018 IPR023705 Nucleoid occlusion protein ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 Gene3D G3DSA:1.10.10.2830 109 222 3.7E-36 T 11-10-2018 ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 SMART SM00470 32 122 2.6E-34 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 Gene3D G3DSA:3.90.1530.30 45 108 3.0E-23 T 11-10-2018 ABE28_023770 32d421a2fc07731c3f71c36640d60ab7 286 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 30 283 2.1E-109 T 11-10-2018 IPR023705 Nucleoid occlusion protein ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 SUPERFAMILY SSF54211 88 180 2.15E-36 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 SUPERFAMILY SSF54211 3 87 2.78E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 Gene3D G3DSA:3.30.230.40 91 195 3.5E-41 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 Gene3D G3DSA:3.30.230.40 1 90 3.3E-35 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 2.1E-64 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 42.325 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABE28_022235 347d48e97c12293d0c5c9c73b206cf38 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 ABE28_007070 81c6ff3683060bac8dcd9f132dd257ba 319 SMART SM00849 24 228 6.1E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_007070 81c6ff3683060bac8dcd9f132dd257ba 319 Pfam PF00753 Metallo-beta-lactamase superfamily 28 228 9.1E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_007070 81c6ff3683060bac8dcd9f132dd257ba 319 SUPERFAMILY SSF56281 24 273 4.85E-47 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_007070 81c6ff3683060bac8dcd9f132dd257ba 319 Gene3D G3DSA:3.60.15.10 10 273 1.6E-55 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 SUPERFAMILY SSF56024 289 488 7.18E-48 T 11-10-2018 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Gene3D G3DSA:3.30.870.10 331 471 2.9E-26 T 11-10-2018 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 35 502 6.8E-178 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Gene3D G3DSA:3.30.870.10 134 319 3.0E-45 T 11-10-2018 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 SUPERFAMILY SSF56024 121 332 1.19E-50 T 11-10-2018 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 SMART SM00155 415 442 6.5E-7 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 SMART SM00155 237 264 2.3E-4 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Hamap MF_01916 Cardiolipin synthase. 33 502 42.468 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Pfam PF13091 PLD-like domain 154 297 3.0E-12 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Pfam PF13091 PLD-like domain 344 468 8.0E-27 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_006150 edaeb95eb6bdf63f85a9b9ab158ba8fc 502 Pfam PF13396 Phospholipase_D-nuclease N-terminal 43 80 2.9E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Gene3D G3DSA:2.120.10.90 499 814 8.7E-107 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 SMART SM00434 10 463 4.3E-251 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Gene3D G3DSA:3.90.199.10 31 485 2.2E-193 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Gene3D G3DSA:1.10.268.10 368 456 2.2E-193 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 8 746 0.0 T 11-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 SUPERFAMILY SSF56719 30 485 4.05E-165 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Gene3D G3DSA:3.30.1360.40 235 331 2.2E-193 T 11-10-2018 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 804 32.929 T 11-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 790 6.0E-269 T 11-10-2018 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 1.6E-148 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 SUPERFAMILY SSF101904 499 809 7.06E-91 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 527 0.12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 6.0E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 647 2.9E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 696 5.0E-10 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_010770 5e0d69742359af28db1dab86cc3c79a0 814 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 707 755 9.7E-6 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_005020 6e19abdb94f7369b9bbc7523abc3920e 484 Gene3D G3DSA:3.40.50.10840 47 279 1.2E-16 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ABE28_005020 6e19abdb94f7369b9bbc7523abc3920e 484 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 308 468 2.2E-35 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain ABE28_005020 6e19abdb94f7369b9bbc7523abc3920e 484 Gene3D G3DSA:3.40.980.20 296 475 3.5E-11 T 11-10-2018 ABE28_005020 6e19abdb94f7369b9bbc7523abc3920e 484 Pfam PF07005 Putative sugar-binding N-terminal domain 40 280 2.4E-51 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ABE28_005020 6e19abdb94f7369b9bbc7523abc3920e 484 SUPERFAMILY SSF142764 40 474 7.45E-67 T 11-10-2018 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 SUPERFAMILY SSF57884 2 88 1.96E-30 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Pfam PF12833 Helix-turn-helix domain 107 177 3.5E-11 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 SUPERFAMILY SSF53155 187 270 3.73E-8 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 269 347 7.8E-29 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 317 323 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 SUPERFAMILY SSF46767 266 347 1.57E-28 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 268 346 5.3E-32 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Gene3D G3DSA:1.10.10.10 266 351 2.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Pfam PF02805 Metal binding domain of Ada 12 73 2.4E-26 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Gene3D G3DSA:3.40.10.10 8 75 4.4E-25 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Gene3D G3DSA:1.10.10.60 80 183 4.8E-11 T 11-10-2018 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 Gene3D G3DSA:3.30.160.70 184 261 4.2E-9 T 11-10-2018 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 SMART SM00342 98 179 2.7E-4 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_024020 3bf963bbf384ae3649ac113938265ee2 353 PIRSF PIRSF000409 1 352 2.0E-140 T 11-10-2018 IPR016221 Bifunctional regulatory protein Ada ABE28_017230 ae0e71a9fee409620175522e9860be12 382 PIRSF PIRSF005572 1 378 3.3E-110 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABE28_017230 ae0e71a9fee409620175522e9860be12 382 Pfam PF00266 Aminotransferase class-V 2 352 4.9E-77 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_017230 ae0e71a9fee409620175522e9860be12 382 SUPERFAMILY SSF53383 1 372 5.53E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017230 ae0e71a9fee409620175522e9860be12 382 Gene3D G3DSA:3.40.640.10 13 255 2.5E-126 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_017230 ae0e71a9fee409620175522e9860be12 382 Gene3D G3DSA:3.90.1150.10 2 370 2.5E-126 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 SUPERFAMILY SSF88659 114 189 2.01E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 257 2.0E-154 T 11-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Gene3D G3DSA:1.10.601.10 11 110 8.3E-27 T 11-10-2018 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 37 256 7.8E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Pfam PF04542 Sigma-70 region 2 42 110 2.4E-17 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 SUPERFAMILY SSF88946 6 110 6.28E-34 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 36 257 2.7E-84 T 11-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 SUPERFAMILY SSF88659 175 257 1.59E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Gene3D G3DSA:1.10.10.10 111 164 1.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 227 253 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PIRSF PIRSF000770 158 259 3.8E-13 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PIRSF PIRSF000770 14 123 1.6E-18 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PIRSF PIRSF000770 114 157 0.7 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Gene3D G3DSA:1.10.10.10 202 259 1.5E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Pfam PF04539 Sigma-70 region 3 124 176 1.1E-7 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 Pfam PF04545 Sigma-70, region 4 207 253 3.1E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PRINTS PR00046 Major sigma-70 factor signature 227 242 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PRINTS PR00046 Major sigma-70 factor signature 242 253 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_007550 425528ed4aa2c43a0c252b91401e6ca1 259 PRINTS PR00046 Major sigma-70 factor signature 210 222 2.3E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_003775 9192d2b7acaae5e24138d09e8f2b65fe 305 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 44 285 2.0E-52 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABE28_003775 9192d2b7acaae5e24138d09e8f2b65fe 305 SUPERFAMILY SSF51695 38 291 6.8E-73 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_003775 9192d2b7acaae5e24138d09e8f2b65fe 305 Gene3D G3DSA:3.20.20.190 17 300 1.8E-101 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 PIRSF PIRSF000105 1 283 5.2E-94 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 Gene3D G3DSA:3.40.50.720 1 189 5.2E-73 T 11-10-2018 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 Gene3D G3DSA:1.10.1040.10 193 278 6.3E-36 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 SUPERFAMILY SSF51735 1 185 2.28E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 1.6E-67 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 SUPERFAMILY SSF48179 185 283 2.47E-34 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_023015 9dc5fc696b46f63ea39f73b860700513 283 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 1.6E-36 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_006545 232b738a4fa673c31e991e3cf1a6ad35 325 Gene3D G3DSA:2.70.98.10 1 324 5.1E-97 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 ABE28_006545 232b738a4fa673c31e991e3cf1a6ad35 325 SUPERFAMILY SSF74650 15 320 7.53E-47 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABE28_006545 232b738a4fa673c31e991e3cf1a6ad35 325 Pfam PF01263 Aldose 1-epimerase 15 320 2.0E-44 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 ABE28_021725 f1d6ea77782e3a5dfc640f4e4da0c088 465 SUPERFAMILY SSF101960 32 462 3.92E-139 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABE28_021725 f1d6ea77782e3a5dfc640f4e4da0c088 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 1.2E-231 T 11-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 ABE28_021725 f1d6ea77782e3a5dfc640f4e4da0c088 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 2.4E-74 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 Pfam PF08281 Sigma-70, region 4 129 180 3.1E-17 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 Gene3D G3DSA:1.10.1740.10 5 110 6.2E-32 T 11-10-2018 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 SUPERFAMILY SSF88659 117 184 1.29E-18 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 Gene3D G3DSA:1.10.10.10 111 186 2.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 Pfam PF04542 Sigma-70 region 2 24 89 2.2E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 SUPERFAMILY SSF88946 7 98 3.92E-29 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 2.4E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_000875 ad3277cc9b52bcb8cc68a69d615f3c94 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 2.3E-101 T 11-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 Gene3D G3DSA:3.40.50.300 2 245 4.4E-81 T 11-10-2018 ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 SUPERFAMILY SSF52540 6 240 6.69E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 Pfam PF00005 ABC transporter 22 170 1.6E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 PIRSF PIRSF039085 3 246 1.2E-117 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023410 9117b8d1974ee59389d87c5934c5b7ca 246 SMART SM00382 31 218 3.1E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.6E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 Gene3D G3DSA:3.40.50.2300 77 328 8.2E-70 T 11-10-2018 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 SUPERFAMILY SSF47413 2 60 9.21E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 Gene3D G3DSA:1.10.260.40 1 60 1.6E-21 T 11-10-2018 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 Pfam PF13377 Periplasmic binding protein-like domain 176 335 2.7E-32 T 11-10-2018 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 Gene3D G3DSA:3.40.50.2300 166 334 8.2E-70 T 11-10-2018 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 SMART SM00354 2 72 2.7E-24 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_002240 81fd2c4c2b84858e4bb1089e679334b1 347 SUPERFAMILY SSF53822 74 336 3.64E-62 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 255 4.3E-61 T 11-10-2018 ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 134 150 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 9.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 140 148 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 3.5E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 SUPERFAMILY SSF51735 11 256 4.62E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006830 fc4b3d4c95d47568c30be9b7f6aebea0 257 Gene3D G3DSA:3.40.50.720 1 256 1.5E-82 T 11-10-2018 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 SUPERFAMILY SSF52172 1 127 8.25E-39 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 Pfam PF00072 Response regulator receiver domain 4 113 5.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 SMART SM00448 2 112 4.2E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 SUPERFAMILY SSF46894 129 227 7.09E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 SMART SM00862 150 226 3.1E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 Gene3D G3DSA:3.40.50.2300 1 129 1.6E-34 T 11-10-2018 ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 Gene3D G3DSA:1.10.10.10 130 228 3.3E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013800 f5040a3c4524b2cf92e4eba2b4bd30e8 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 9.7E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_006665 97c8fdd38d77a484eeb90167fa4b95d3 211 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 8 204 3.5E-44 T 11-10-2018 IPR006214 Bax inhibitor 1-related ABE28_010935 c91aed343d9633d7881045f148825ad5 460 PIRSF PIRSF005690 1 460 1.9E-160 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_010935 c91aed343d9633d7881045f148825ad5 460 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 1 458 7.0E-163 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 SUPERFAMILY SSF53383 10 439 4.66E-124 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 Pfam PF00202 Aminotransferase class-III 17 432 4.0E-107 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 PIRSF PIRSF000521 13 439 6.8E-42 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 Gene3D G3DSA:3.90.1150.10 17 436 8.4E-151 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 Gene3D G3DSA:3.40.640.10 50 327 8.4E-151 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_018455 9d840ed9413930c3bcbcedb564a750e8 455 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_000300 17106049b40154e6eea7c73173a206c2 102 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 18 102 9.0E-36 T 11-10-2018 IPR012504 Sporulation protein YabP ABE28_000300 17106049b40154e6eea7c73173a206c2 102 Gene3D G3DSA:2.60.40.2000 27 84 2.8E-24 T 11-10-2018 IPR038705 YabP superfamily ABE28_000300 17106049b40154e6eea7c73173a206c2 102 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 19 102 2.1E-33 T 11-10-2018 IPR012504 Sporulation protein YabP ABE28_000300 17106049b40154e6eea7c73173a206c2 102 Pfam PF07873 YabP family 19 84 2.1E-21 T 11-10-2018 IPR022476 Sporulation protein YabP/YqfC ABE28_000300 17106049b40154e6eea7c73173a206c2 102 PIRSF PIRSF011576 1 102 2.0E-52 T 11-10-2018 IPR012504 Sporulation protein YabP ABE28_007075 4d762bb1988541821ab191c09a155f36 79 PIRSF PIRSF037356 1 78 3.5E-30 T 11-10-2018 IPR014904 Protein of unknown function DUF1797 ABE28_007075 4d762bb1988541821ab191c09a155f36 79 Pfam PF08796 Protein of unknown function (DUF1797) 7 77 6.0E-26 T 11-10-2018 IPR014904 Protein of unknown function DUF1797 ABE28_007075 4d762bb1988541821ab191c09a155f36 79 Gene3D G3DSA:3.30.720.20 1 79 6.8E-31 T 11-10-2018 IPR038073 YkuJ-like superfamily ABE28_007075 4d762bb1988541821ab191c09a155f36 79 SUPERFAMILY SSF143567 2 78 3.14E-26 T 11-10-2018 IPR038073 YkuJ-like superfamily ABE28_017670 b059a93c04ebe7791e9e9c8781f7cd81 73 Gene3D G3DSA:1.10.10.10 10 72 7.9E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017670 b059a93c04ebe7791e9e9c8781f7cd81 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 53 1.1E-9 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_017670 b059a93c04ebe7791e9e9c8781f7cd81 73 SUPERFAMILY SSF46785 11 60 1.3E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017670 b059a93c04ebe7791e9e9c8781f7cd81 73 SMART SM00420 11 56 0.0014 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_008350 80f58a61fd0c005462f562e248a5e03d 320 SUPERFAMILY SSF51556 11 316 2.24E-70 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_008350 80f58a61fd0c005462f562e248a5e03d 320 Gene3D G3DSA:3.20.20.140 8 314 4.6E-99 T 11-10-2018 ABE28_008350 80f58a61fd0c005462f562e248a5e03d 320 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 10 313 2.8E-89 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 ABE28_001790 9d8406232ad284e47540b43adb483b1b 398 Pfam PF01882 Protein of unknown function DUF58 202 275 9.6E-21 T 11-10-2018 IPR002881 Domain of unknown function DUF58 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 Pfam PF01699 Sodium/calcium exchanger protein 207 344 3.5E-20 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 Pfam PF01699 Sodium/calcium exchanger protein 27 179 1.8E-19 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 6 349 7.9E-118 T 11-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 TIGRFAM TIGR00378 cax: calcium/proton exchanger 9 350 5.4E-147 T 11-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 Gene3D G3DSA:1.20.1420.30 58 342 3.4E-24 T 11-10-2018 ABE28_002735 29f63049a0c3c9e6b8a0c33ab0584eee 352 Gene3D G3DSA:1.20.58.1130 34 239 3.4E-24 T 11-10-2018 ABE28_002160 88b187b40c7b2ed3a9518857aa154c9f 125 Pfam PF16888 Domain of unknown function (DUF5082) 3 87 8.3E-9 T 11-10-2018 IPR031681 Protein of unknown function DUF5082 ABE28_002160 88b187b40c7b2ed3a9518857aa154c9f 125 ProDom PD085159 YWQH COILED COIL 2 123 1.0E-21 T 11-10-2018 IPR020326 Uncharacterised protein family YwqH ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 SUPERFAMILY SSF55120 1 245 3.02E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 Gene3D G3DSA:3.30.70.580 1 106 1.5E-32 T 11-10-2018 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.1E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 Pfam PF01416 tRNA pseudouridine synthase 9 105 1.4E-7 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 Gene3D G3DSA:3.30.70.660 107 244 4.0E-49 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 PIRSF PIRSF001430 1 245 2.2E-80 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 5 240 7.0E-61 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006345 9d6aeed605ff19b101252ce055b78ca9 245 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 35.297 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_013730 ac207fb0001d4031621deed8381e06c0 543 Pfam PF01546 Peptidase family M20/M25/M40 82 282 1.4E-8 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_013730 ac207fb0001d4031621deed8381e06c0 543 Gene3D G3DSA:3.40.630.10 9 248 1.7E-28 T 11-10-2018 ABE28_013730 ac207fb0001d4031621deed8381e06c0 543 PIRSF PIRSF010386 1 535 1.5E-192 T 11-10-2018 IPR012166 Uncharacterised protein family RocB ABE28_013730 ac207fb0001d4031621deed8381e06c0 543 SUPERFAMILY SSF53187 10 525 3.26E-22 T 11-10-2018 ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 PRINTS PR00723 Subtilisin serine protease family (S8) signature 125 144 1.0E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 PRINTS PR00723 Subtilisin serine protease family (S8) signature 160 173 1.0E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 PRINTS PR00723 Subtilisin serine protease family (S8) signature 314 330 1.0E-12 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 SUPERFAMILY SSF54897 31 92 8.5E-9 T 11-10-2018 ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 Gene3D G3DSA:3.30.70.80 24 94 1.7E-12 T 11-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 Gene3D G3DSA:3.40.50.200 104 367 6.8E-75 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 SUPERFAMILY SSF52743 106 355 4.06E-74 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_015170 c67594bf2d6a5cf168081aea73b86816 619 Pfam PF00082 Subtilase family 125 359 2.1E-38 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 SUPERFAMILY SSF48029 22 114 4.45E-21 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Gene3D G3DSA:1.10.220.30 14 99 2.9E-20 T 11-10-2018 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PIRSF PIRSF003161 14 349 1.8E-123 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Pfam PF14841 FliG middle domain 130 204 8.6E-33 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Gene3D G3DSA:1.10.220.30 210 349 4.5E-48 T 11-10-2018 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 SUPERFAMILY SSF48029 129 340 8.24E-70 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Pfam PF14842 FliG N-terminal domain 20 122 5.0E-37 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 15 349 8.4E-153 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 49 75 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 20 36 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 241 261 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 263 283 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 287 313 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 129 152 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 PRINTS PR00954 Flagellar motor switch protein FliG signature 210 235 5.7E-76 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Gene3D G3DSA:1.10.220.30 118 209 2.4E-35 T 11-10-2018 ABE28_007950 6dfbdc88ca42a89e6772280b4ea18c3e 349 Pfam PF01706 FliG C-terminal domain 233 339 7.3E-41 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 Pfam PF08402 TOBE domain 286 361 2.4E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 SUPERFAMILY SSF50331 236 362 3.36E-11 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 Gene3D G3DSA:2.40.50.140 293 354 4.8E-6 T 11-10-2018 ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 Gene3D G3DSA:3.40.50.300 1 238 2.1E-76 T 11-10-2018 ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 Gene3D G3DSA:2.40.50.100 239 361 4.8E-6 T 11-10-2018 ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 SUPERFAMILY SSF52540 4 243 3.22E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 Pfam PF00005 ABC transporter 20 161 4.0E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 SMART SM00382 28 212 6.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002855 2e8bbf784c7fcd48772bfff78f67c701 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_017360 1ee737cfbc7d360c10b5824b84a49bea 370 Pfam PF02073 Thermophilic metalloprotease (M29) 4 355 1.2E-58 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_017360 1ee737cfbc7d360c10b5824b84a49bea 370 Gene3D G3DSA:3.40.1830.10 3 164 2.5E-12 T 11-10-2018 IPR035097 Peptidase M29, N-terminal ABE28_017360 1ee737cfbc7d360c10b5824b84a49bea 370 SUPERFAMILY SSF144052 1 359 5.89E-112 T 11-10-2018 ABE28_006660 f36c2aded38f98f98106cd34a17465a5 185 Gene3D G3DSA:3.10.129.10 1 165 1.8E-53 T 11-10-2018 ABE28_006660 f36c2aded38f98f98106cd34a17465a5 185 SUPERFAMILY SSF54637 5 155 9.83E-47 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_006660 f36c2aded38f98f98106cd34a17465a5 185 Pfam PF03061 Thioesterase superfamily 27 100 2.7E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_009170 f7cf33a17ab598d5b2a18560b3e97ab9 81 SUPERFAMILY SSF46785 5 69 4.9E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009170 f7cf33a17ab598d5b2a18560b3e97ab9 81 Gene3D G3DSA:1.10.10.10 1 69 3.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009170 f7cf33a17ab598d5b2a18560b3e97ab9 81 Pfam PF09639 YjcQ protein 5 79 2.2E-15 T 11-10-2018 IPR018597 Bacteriophage Tuc2009, YjcQ ABE28_020445 f756112a86ea61199276a07aca05fab9 400 Gene3D G3DSA:3.30.830.10 10 217 3.9E-36 T 11-10-2018 ABE28_020445 f756112a86ea61199276a07aca05fab9 400 Pfam PF05193 Peptidase M16 inactive domain 173 215 3.7E-4 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ABE28_020445 f756112a86ea61199276a07aca05fab9 400 Gene3D G3DSA:3.30.830.10 226 399 2.8E-17 T 11-10-2018 ABE28_020445 f756112a86ea61199276a07aca05fab9 400 Pfam PF00675 Insulinase (Peptidase family M16) 48 150 7.2E-12 T 11-10-2018 IPR011765 Peptidase M16, N-terminal ABE28_020445 f756112a86ea61199276a07aca05fab9 400 SUPERFAMILY SSF63411 270 398 2.97E-8 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_020445 f756112a86ea61199276a07aca05fab9 400 SUPERFAMILY SSF63411 14 204 1.52E-26 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_020025 a2ef4a82197658c84c6cac05b5d50a88 495 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 495 243.09 T 11-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020025 a2ef4a82197658c84c6cac05b5d50a88 495 PIRSF PIRSF006005 1 495 6.2E-216 T 11-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_020025 a2ef4a82197658c84c6cac05b5d50a88 495 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 246 440 1.8E-33 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ABE28_020025 a2ef4a82197658c84c6cac05b5d50a88 495 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 22 230 3.2E-34 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 ABE28_020025 a2ef4a82197658c84c6cac05b5d50a88 495 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 7 492 5.9E-205 T 11-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Pfam PF09385 Histidine kinase N terminal 11 138 2.3E-45 T 11-10-2018 IPR018984 Histidine kinase, N-terminal ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Gene3D G3DSA:1.10.287.130 155 222 5.3E-10 T 11-10-2018 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Gene3D G3DSA:1.10.490.70 4 154 9.2E-46 T 11-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 SMART SM00387 267 375 5.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 SUPERFAMILY SSF47384 154 222 1.92E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Gene3D G3DSA:3.30.565.10 224 374 1.7E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 SUPERFAMILY SSF55874 216 373 2.23E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 269 373 5.1E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 Pfam PF00512 His Kinase A (phospho-acceptor) domain 163 222 5.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 335 5.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 307 321 5.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 PRINTS PR00344 Bacterial sensor protein C-terminal signature 336 354 5.0E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012450 ee1ef7adcae975d485df4077ff7d0484 375 SMART SM00388 162 224 1.2E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_005835 d12af8c8dfd331ffbe7e4ad626cc316f 269 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 204 2.9E-61 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_005835 d12af8c8dfd331ffbe7e4ad626cc316f 269 PIRSF PIRSF006483 1 269 9.1E-92 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_005835 d12af8c8dfd331ffbe7e4ad626cc316f 269 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 210 264 2.2E-23 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_005835 d12af8c8dfd331ffbe7e4ad626cc316f 269 Gene3D G3DSA:3.30.70.120 182 257 5.5E-22 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 Pfam PF01192 RNA polymerase Rpb6 9 61 2.6E-13 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 Gene3D G3DSA:3.90.940.10 1 68 1.4E-17 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 SMART SM01409 8 61 2.7E-13 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 SUPERFAMILY SSF63562 1 66 7.67E-21 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 2.1E-20 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_007680 9ed5d23f608b810fe95e5ffed7e839d2 68 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 14.179 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 379 7.9E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 Pfam PF07730 Histidine kinase 180 248 6.5E-15 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 PIRSF PIRSF003169 1 380 1.8E-151 T 11-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 Pfam PF05384 Sensor protein DegS 12 170 3.6E-54 T 11-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 Gene3D G3DSA:3.30.565.10 246 379 5.7E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 SUPERFAMILY SSF55874 268 377 1.83E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_022495 1fb8e1129ab590aeddf8ce12d73b6d1b 380 SMART SM00387 287 380 8.1E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 SMART SM01134 73 233 1.0E-61 T 11-10-2018 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 SUPERFAMILY SSF100950 75 233 5.79E-30 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 SMART SM00420 6 58 1.6E-13 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 Pfam PF00455 DeoR C terminal sensor domain 75 231 2.2E-49 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 9.0E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 9.0E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 SUPERFAMILY SSF46785 5 78 1.55E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.3E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_017650 dd9caa45de5fbf5a0d94f9b54ab606ac 252 Gene3D G3DSA:1.10.10.10 1 58 2.0E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 SUPERFAMILY SSF56235 58 777 5.14E-232 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 Gene3D G3DSA:1.10.439.10 31 195 2.1E-59 T 11-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 Gene3D G3DSA:1.10.1400.10 548 679 2.8E-177 T 11-10-2018 ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 Pfam PF01804 Penicillin amidase 59 777 2.6E-234 T 11-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 PIRSF PIRSF001227 19 785 2.8E-216 T 11-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 Gene3D G3DSA:3.60.20.10 256 768 2.8E-177 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_021245 3dbbe574f445fac5425b76c4ecdefa22 789 Gene3D G3DSA:2.30.120.10 328 399 2.8E-177 T 11-10-2018 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 Pfam PF00512 His Kinase A (phospho-acceptor) domain 206 266 2.5E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 SMART SM00387 310 416 7.8E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 Pfam PF07694 5TMR of 5TMR-LYT 24 181 5.3E-15 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 Gene3D G3DSA:3.30.565.10 268 413 8.1E-55 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 414 2.5E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 SUPERFAMILY SSF55874 273 414 1.01E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 Gene3D G3DSA:1.10.287.130 208 267 8.1E-55 T 11-10-2018 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 8.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 8.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 8.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 SUPERFAMILY SSF47384 199 267 7.85E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_018855 bdc534afb49411df1273b168da2d8db9 421 SMART SM00388 204 270 4.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 SUPERFAMILY SSF52833 3 103 8.34E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 Gene3D G3DSA:3.40.30.10 1 104 5.2E-35 T 11-10-2018 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 PRINTS PR00421 Thioredoxin family signature 28 37 6.0E-9 T 11-10-2018 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 PRINTS PR00421 Thioredoxin family signature 20 28 6.0E-9 T 11-10-2018 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 PRINTS PR00421 Thioredoxin family signature 68 79 6.0E-9 T 11-10-2018 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 3.2E-38 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 Pfam PF00085 Thioredoxin 3 103 1.3E-32 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_009995 2a8abbe1ee7325b9ca00a8f5252bc9e9 104 PIRSF PIRSF000077 1 104 1.9E-41 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 454 657 2.4E-58 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 Pfam PF12698 ABC-2 family transporter protein 413 647 1.1E-8 T 11-10-2018 ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 Pfam PF12698 ABC-2 family transporter protein 24 165 1.2E-14 T 11-10-2018 ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 10 171 1.6E-63 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 403 428 2.9E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_018385 2c2e275db6539d1589eb4c20f18b8fe4 667 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 203 230 1.7E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_009855 f4c15635da0e6e1c7b92dbb1642cff37 369 SUPERFAMILY SSF48371 38 238 4.87E-44 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_009855 f4c15635da0e6e1c7b92dbb1642cff37 369 Pfam PF08713 DNA alkylation repair enzyme 116 212 1.3E-6 T 11-10-2018 IPR014825 DNA alkylation repair enzyme ABE28_009855 f4c15635da0e6e1c7b92dbb1642cff37 369 Gene3D G3DSA:1.25.40.290 123 237 7.8E-38 T 11-10-2018 ABE28_004190 ef4445113c47b5cca1612c38c9f9f1a7 375 Gene3D G3DSA:3.10.310.10 3 363 9.4E-137 T 11-10-2018 ABE28_004190 ef4445113c47b5cca1612c38c9f9f1a7 375 Pfam PF04303 PrpF protein 1 365 3.3E-136 T 11-10-2018 IPR007400 PrpF protein ABE28_004190 ef4445113c47b5cca1612c38c9f9f1a7 375 SUPERFAMILY SSF54506 1 163 2.75E-61 T 11-10-2018 ABE28_004190 ef4445113c47b5cca1612c38c9f9f1a7 375 Gene3D G3DSA:3.10.310.10 171 346 9.4E-137 T 11-10-2018 ABE28_004190 ef4445113c47b5cca1612c38c9f9f1a7 375 SUPERFAMILY SSF54506 169 367 2.98E-53 T 11-10-2018 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 3 719 0.0 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 SUPERFAMILY SSF51645 3 719 1.01E-296 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 Hamap MF_00641 Malate synthase G [glcB]. 1 725 370.583 T 11-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 Pfam PF01274 Malate synthase 18 694 1.0E-168 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 Gene3D G3DSA:3.20.20.360 7 578 2.6E-268 T 11-10-2018 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 Gene3D G3DSA:2.170.170.11 133 262 2.6E-268 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 ABE28_005065 107f9eff88154cdaf7444da8d16468cc 725 Gene3D G3DSA:1.20.1220.12 581 725 1.4E-71 T 11-10-2018 ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 256 1.2E-66 T 11-10-2018 ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.3E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 SUPERFAMILY SSF51735 7 258 4.4E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006870 aeb0eb46760801e6a842f0ee2a0902ca 259 Gene3D G3DSA:3.40.50.720 1 258 3.6E-82 T 11-10-2018 ABE28_022605 3ee6b3872a1e382893bc3c2f680c498e 689 Pfam PF08486 Stage II sporulation protein 124 203 3.7E-23 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_022605 3ee6b3872a1e382893bc3c2f680c498e 689 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 127 422 5.0E-71 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 ABE28_022605 3ee6b3872a1e382893bc3c2f680c498e 689 ProDom PD191273 TC0311 EXPORTED CT041 CPN0389/CP0366/CPJ0389/CPB0400 27 163 3.0E-4 T 11-10-2018 ABE28_022605 3ee6b3872a1e382893bc3c2f680c498e 689 Gene3D G3DSA:2.30.30.40 623 689 3.3E-9 T 11-10-2018 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 Pfam PF06426 Serine acetyltransferase, N-terminal 3 35 2.2E-4 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 126 154 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 PIRSF PIRSF000441 1 215 5.2E-83 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 Gene3D G3DSA:2.160.10.10 67 183 1.2E-37 T 11-10-2018 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 Gene3D G3DSA:1.10.3130.10 1 66 4.0E-24 T 11-10-2018 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 SUPERFAMILY SSF51161 4 168 8.59E-58 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 6 166 3.5E-78 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 ABE28_000475 05d7461eddcd08697a2e5bb798795d13 216 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 117 151 1.2E-8 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_006750 287272ad2f6c95ee6d51ce6de7153629 127 SUPERFAMILY SSF46785 5 79 2.22E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_006750 287272ad2f6c95ee6d51ce6de7153629 127 Gene3D G3DSA:1.10.10.10 9 124 3.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006750 287272ad2f6c95ee6d51ce6de7153629 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.1E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_006750 287272ad2f6c95ee6d51ce6de7153629 127 SMART SM00345 16 75 9.4E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 Gene3D G3DSA:1.20.210.10 30 561 3.0E-198 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 644 0.0 T 11-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 SUPERFAMILY SSF81442 44 553 2.49E-177 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 1.6E-99 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002325 ece97ba28f2d90bcf7e0d61174b1d1c9 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 500 4.1E-143 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF53756 1027 1178 3.72E-37 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:2.30.30.170 940 1017 2.4E-7 T 11-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:2.30.30.170 652 731 5.6E-7 T 11-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:2.30.30.170 858 936 2.5E-16 T 11-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:2.30.30.170 733 813 1.6E-14 T 11-10-2018 IPR038200 GW domain superfamily KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF82057 941 1015 2.66E-10 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF82057 655 730 1.89E-9 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 38 409 3.6E-94 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF53756 170 408 6.28E-12 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF82057 732 811 1.46E-17 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF82057 861 936 2.2E-15 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF00534 Glycosyl transferases group 1 1029 1186 1.6E-30 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 SUPERFAMILY SSF53756 428 641 2.24E-8 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF13457 SH3-like domain 751 810 2.3E-10 T 11-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF13457 SH3-like domain 862 933 7.7E-12 T 11-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF13457 SH3-like domain 658 728 1.4E-8 T 11-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Pfam PF13457 SH3-like domain 946 1015 4.1E-6 T 11-10-2018 IPR025987 GW domain KEGG: 00511+3.2.1.96|MetaCyc: PWY-7883 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:3.40.50.2000 1035 1178 7.7E-37 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:3.40.50.12580 215 395 1.4E-124 T 11-10-2018 ABE28_020205 e07c5897531c961b40451972a5bcbaab 1201 Gene3D G3DSA:3.40.50.11820 37 402 1.4E-124 T 11-10-2018 ABE28_020160 527e06f6a803377b4e548d850cc5f503 192 SUPERFAMILY SSF46689 3 66 2.24E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_020160 527e06f6a803377b4e548d850cc5f503 192 Pfam PF14278 Transcriptional regulator C-terminal region 88 163 1.3E-13 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type ABE28_020160 527e06f6a803377b4e548d850cc5f503 192 Gene3D G3DSA:1.10.357.10 1 181 2.8E-43 T 11-10-2018 ABE28_020160 527e06f6a803377b4e548d850cc5f503 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 54 1.4E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Pfam PF16403 Domain of unknown function (DUF5011) 324 394 1.7E-16 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Pfam PF16403 Domain of unknown function (DUF5011) 403 471 4.2E-16 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Pfam PF16403 Domain of unknown function (DUF5011) 479 549 1.2E-16 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Gene3D G3DSA:1.10.530.10 49 201 6.9E-14 T 11-10-2018 ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Gene3D G3DSA:2.60.40.10 315 394 2.8E-22 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Gene3D G3DSA:2.60.40.10 395 472 2.9E-26 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 SUPERFAMILY SSF53955 54 197 1.27E-8 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_017500 81d48ada34e52b81cb0f77e0ff4feedd 550 Gene3D G3DSA:2.60.40.10 473 550 3.2E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_006620 af5b7f8deffdc394445c885ca04c520b 259 Gene3D G3DSA:1.20.910.10 23 259 3.7E-68 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABE28_006620 af5b7f8deffdc394445c885ca04c520b 259 Pfam PF03070 TENA/THI-4/PQQC family 44 251 2.7E-50 T 11-10-2018 IPR004305 Thiaminase-2/PQQC ABE28_006620 af5b7f8deffdc394445c885ca04c520b 259 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 47 251 2.5E-60 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 ABE28_006620 af5b7f8deffdc394445c885ca04c520b 259 SUPERFAMILY SSF48613 36 250 1.16E-68 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 SUPERFAMILY SSF69065 16 175 1.74E-53 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 SUPERFAMILY SSF54768 129 240 4.56E-26 T 11-10-2018 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 Pfam PF00035 Double-stranded RNA binding motif 173 239 1.6E-17 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 Pfam PF14622 Ribonuclease-III-like 30 160 3.3E-37 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 ProSitePatterns PS00517 Ribonuclease III family signature. 56 64 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 Gene3D G3DSA:1.10.1520.10 12 166 5.2E-51 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 Hamap MF_00104 Ribonuclease 3 [rnc]. 20 236 31.798 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 Gene3D G3DSA:3.30.160.20 167 244 6.0E-23 T 11-10-2018 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 SMART SM00535 32 167 1.2E-60 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 SMART SM00358 173 240 3.9E-21 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain ABE28_007800 a5299ab20f35c5a8c15cacfffb402932 246 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 20 236 1.0E-79 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 ABE28_005720 954e54a1cd7869176d2710074aabadcb 108 Gene3D G3DSA:1.10.3750.10 1 108 1.6E-33 T 11-10-2018 IPR035945 YhaI-like superfamily ABE28_005720 954e54a1cd7869176d2710074aabadcb 108 ProDom PD073069 YHAI 3D-STRUCTURE 11 100 2.0E-12 T 11-10-2018 IPR015058 Protein of unknown function DUF1878 ABE28_005720 954e54a1cd7869176d2710074aabadcb 108 Pfam PF08963 Protein of unknown function (DUF1878) 1 106 2.0E-26 T 11-10-2018 IPR015058 Protein of unknown function DUF1878 ABE28_005720 954e54a1cd7869176d2710074aabadcb 108 SUPERFAMILY SSF109915 3 105 1.44E-23 T 11-10-2018 IPR035945 YhaI-like superfamily ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 SUPERFAMILY SSF53720 14 438 3.8E-110 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 Pfam PF00171 Aldehyde dehydrogenase family 24 431 4.9E-86 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 Gene3D G3DSA:3.40.605.10 22 431 4.4E-143 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 Gene3D G3DSA:3.40.309.10 218 413 4.4E-143 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 PIRSF PIRSF036492 3 464 3.6E-149 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 242 253 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_002625 3ab928da641ffec9d82eae28639c0eda 465 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 214 221 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_001805 c00df25eedf4af72d02e7cd3dde03a0a 443 PIRSF PIRSF005353 1 443 3.3E-168 T 11-10-2018 IPR026033 Purine permease PbuG-like ABE28_001805 c00df25eedf4af72d02e7cd3dde03a0a 443 Pfam PF00860 Permease family 16 404 1.8E-51 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 Pfam PF02378 Phosphotransferase system, EIIC 19 278 4.6E-15 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 Gene3D G3DSA:3.40.930.10 505 645 8.7E-43 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 347 9.1E-163 T 11-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 381 464 2.6E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 551 567 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 Gene3D G3DSA:3.40.50.2300 374 470 3.2E-37 T 11-10-2018 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 SUPERFAMILY SSF55804 506 643 6.54E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 SUPERFAMILY SSF52794 379 466 2.22E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_018090 7c2797b87f029f9a973235d21a994f23 647 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 506 643 2.5E-33 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 Gene3D G3DSA:1.20.1560.10 4 325 1.2E-109 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 Pfam PF00005 ABC transporter 359 508 1.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 SUPERFAMILY SSF52540 332 579 2.66E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 SMART SM00382 368 554 8.4E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 SUPERFAMILY SSF90123 5 325 4.19E-80 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 Pfam PF00664 ABC transporter transmembrane region 25 292 9.6E-43 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_003660 d9575cb95a114410b9ed39167072abd6 582 Gene3D G3DSA:3.40.50.300 332 581 6.0E-92 T 11-10-2018 ABE28_022975 b1b57401e6de6731af47aed53860903b 123 Gene3D G3DSA:3.40.50.2300 1 123 7.9E-43 T 11-10-2018 ABE28_022975 b1b57401e6de6731af47aed53860903b 123 SUPERFAMILY SSF52172 4 118 3.84E-38 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_022975 b1b57401e6de6731af47aed53860903b 123 Pfam PF00072 Response regulator receiver domain 5 115 2.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_022975 b1b57401e6de6731af47aed53860903b 123 SMART SM00448 3 114 2.3E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SMART SM00304 187 238 5.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SMART SM00387 353 462 3.0E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Pfam PF00672 HAMP domain 189 234 8.7E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SUPERFAMILY SSF158472 189 235 4.71E-6 T 11-10-2018 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Pfam PF00512 His Kinase A (phospho-acceptor) domain 247 306 1.3E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SMART SM00388 246 308 1.5E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SUPERFAMILY SSF47384 232 306 1.28E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Gene3D G3DSA:1.20.1480.50 151 241 4.5E-9 T 11-10-2018 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 458 9.8E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 SUPERFAMILY SSF55874 310 459 1.96E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Gene3D G3DSA:1.10.287.130 242 307 2.3E-10 T 11-10-2018 ABE28_010295 4f920527b9adfe8c9b2e6a9e2fcc7689 463 Gene3D G3DSA:3.30.565.10 308 463 1.9E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 SUPERFAMILY SSF46785 17 78 2.36E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 Gene3D G3DSA:1.10.10.10 12 78 1.2E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 Gene3D G3DSA:3.30.420.40 200 241 5.5E-25 T 11-10-2018 ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 SUPERFAMILY SSF53067 94 255 1.48E-17 T 11-10-2018 ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 Gene3D G3DSA:3.30.420.40 89 199 5.5E-25 T 11-10-2018 ABE28_013640 0482990e88d1304cd3194c6653a1462c 344 Pfam PF00480 ROK family 107 235 4.5E-16 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_018560 65f56580a81d5b92a013a2a515a03cc3 51 Pfam PF12841 YvrJ protein family 8 41 3.5E-15 T 11-10-2018 IPR024419 Protein of unknown function YvrJ ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 705 719 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:3.30.470.20 120 401 9.0E-118 T 11-10-2018 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:3.30.470.20 663 925 2.5E-84 T 11-10-2018 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 949 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:3.40.50.20 550 658 1.2E-45 T 11-10-2018 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 669 864 1.1E-36 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 3.4E-79 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:1.10.1030.10 406 549 1.1E-41 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SMART SM01096 420 543 2.3E-56 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SUPERFAMILY SSF52440 1 127 1.44E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SUPERFAMILY SSF56059 128 399 1.26E-104 T 11-10-2018 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 543 6.6E-37 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.7E-61 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SUPERFAMILY SSF48108 394 549 6.93E-45 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1024 12.265 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:3.30.1490.20 682 749 2.5E-84 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SUPERFAMILY SSF52440 552 671 2.45E-47 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 Gene3D G3DSA:3.40.50.20 1 116 8.9E-46 T 11-10-2018 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 831 838 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_006045 c12f75b791cf36e131756d15dbc2f146 1039 SUPERFAMILY SSF56059 669 928 1.61E-78 T 11-10-2018 ABE28_015355 4d90eb8c98da5b45099747b784944b8d 122 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 118 1.9E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_015355 4d90eb8c98da5b45099747b784944b8d 122 SUPERFAMILY SSF46626 6 121 3.2E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_015355 4d90eb8c98da5b45099747b784944b8d 122 Gene3D G3DSA:1.10.760.10 53 122 3.4E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_015355 4d90eb8c98da5b45099747b784944b8d 122 PIRSF PIRSF000025 1 122 9.4E-35 T 11-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 Gene3D G3DSA:2.40.50.140 1 112 6.2E-44 T 11-10-2018 ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 110 2.6E-36 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 Pfam PF00436 Single-strand binding protein family 2 102 6.4E-34 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 SUPERFAMILY SSF50249 1 108 3.6E-40 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 PIRSF PIRSF002070 1 117 3.4E-33 T 11-10-2018 ABE28_022695 f3a7057cc5f3e84d98365b7705698960 120 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 31.867 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 SUPERFAMILY SSF51735 10 266 1.03E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 195 2.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 2.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 2.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 93 104 2.1E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 Pfam PF00106 short chain dehydrogenase 16 216 3.1E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021110 dc655f088af11b25c7ee1583103ab6ca 312 Gene3D G3DSA:3.40.50.720 1 305 7.6E-77 T 11-10-2018 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 Pfam PF01430 Hsp33 protein 3 280 3.6E-90 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 SUPERFAMILY SSF64397 2 241 6.28E-78 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 PIRSF PIRSF005261 1 292 1.5E-78 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 Gene3D G3DSA:3.55.30.10 2 233 1.1E-93 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 SUPERFAMILY SSF118352 232 288 1.44E-20 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 41.573 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 ABE28_000365 f54aabce56512fde69519a9dd2ea0fdd 293 Gene3D G3DSA:3.90.1280.10 234 291 1.1E-23 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 ABE28_006005 787343244302eedc50b551be70c9df0a 102 SUPERFAMILY SSF117916 4 100 1.24E-31 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_006005 787343244302eedc50b551be70c9df0a 102 Gene3D G3DSA:3.30.300.130 1 102 4.8E-35 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_006005 787343244302eedc50b551be70c9df0a 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 5.5E-20 T 11-10-2018 IPR002744 MIP18 family-like ABE28_007445 cd3b30fc88c5dff3ece401656d335279 250 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 102 122 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_007445 cd3b30fc88c5dff3ece401656d335279 250 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 250 6.0E-34 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_007445 cd3b30fc88c5dff3ece401656d335279 250 Gene3D G3DSA:3.90.226.10 2 250 5.6E-60 T 11-10-2018 ABE28_007445 cd3b30fc88c5dff3ece401656d335279 250 SUPERFAMILY SSF52096 4 250 1.56E-58 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022005 70d02485696059bf91377f772086216f 202 SUPERFAMILY SSF46894 123 199 1.33E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_022005 70d02485696059bf91377f772086216f 202 SMART SM00448 2 115 1.2E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_022005 70d02485696059bf91377f772086216f 202 Pfam PF00072 Response regulator receiver domain 4 115 2.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_022005 70d02485696059bf91377f772086216f 202 Gene3D G3DSA:3.40.50.12740 2 199 1.1E-57 T 11-10-2018 ABE28_022005 70d02485696059bf91377f772086216f 202 SUPERFAMILY SSF52172 1 131 6.4E-29 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_022005 70d02485696059bf91377f772086216f 202 SMART SM00421 137 194 2.6E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022005 70d02485696059bf91377f772086216f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 1.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022005 70d02485696059bf91377f772086216f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 1.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022005 70d02485696059bf91377f772086216f 202 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 1.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022005 70d02485696059bf91377f772086216f 202 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 192 9.9E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_022670 ec3070c5f82af3c03cc0523cd5df1a9b 334 SUPERFAMILY SSF161098 90 318 2.62E-22 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022670 ec3070c5f82af3c03cc0523cd5df1a9b 334 Gene3D G3DSA:1.10.3720.10 91 328 1.5E-24 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022670 ec3070c5f82af3c03cc0523cd5df1a9b 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 1.0E-43 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 SUPERFAMILY SSF56300 774 1075 1.9E-70 T 11-10-2018 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 SUPERFAMILY SSF56300 138 500 1.35E-79 T 11-10-2018 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Gene3D G3DSA:3.60.21.10 773 1079 1.4E-75 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 ProSitePatterns PS00786 5'-nucleotidase signature 2. 854 865 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Gene3D G3DSA:3.90.780.10 1084 1267 1.7E-54 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Gene3D G3DSA:3.90.780.10 544 726 9.0E-59 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 SUPERFAMILY SSF55816 1078 1270 5.89E-51 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Gene3D G3DSA:3.60.21.10 136 490 2.9E-123 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Pfam PF00149 Calcineurin-like phosphoesterase 144 385 2.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Pfam PF00149 Calcineurin-like phosphoesterase 779 1007 1.1E-7 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 SUPERFAMILY SSF55816 491 727 1.83E-42 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Pfam PF02872 5'-nucleotidase, C-terminal domain 491 688 3.2E-21 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 Pfam PF02872 5'-nucleotidase, C-terminal domain 1082 1231 7.6E-44 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 368 391 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 663 682 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 142 160 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 563 586 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 342 359 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021220 a782c9f3e6112ae64d3826c22522470d 1271 PRINTS PR01607 Apyrase family signature 420 440 1.3E-25 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 SUPERFAMILY SSF51430 4 309 1.96E-91 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 142 159 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 PRINTS PR00069 Aldo-keto reductase signature 111 129 5.6E-16 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 PRINTS PR00069 Aldo-keto reductase signature 142 159 5.6E-16 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 PRINTS PR00069 Aldo-keto reductase signature 242 266 5.6E-16 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 Pfam PF00248 Aldo/keto reductase family 16 308 1.3E-73 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_002270 4294a94ab18004bcb9b92d57b08ae75a 310 Gene3D G3DSA:3.20.20.100 2 310 2.8E-112 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SUPERFAMILY SSF55785 254 353 1.08E-23 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Gene3D G3DSA:3.30.450.20 241 379 2.2E-27 T 11-10-2018 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Pfam PF08447 PAS fold 392 477 6.3E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Gene3D G3DSA:3.30.565.10 565 713 3.8E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00091 370 437 0.87 T 11-10-2018 IPR000014 PAS domain ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00091 244 310 1.5 T 11-10-2018 IPR000014 PAS domain ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SUPERFAMILY SSF47384 493 562 5.69E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Gene3D G3DSA:3.30.450.20 380 488 9.3E-27 T 11-10-2018 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Gene3D G3DSA:1.10.287.130 489 563 4.9E-22 T 11-10-2018 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00086 442 484 2.3E-7 T 11-10-2018 IPR001610 PAC motif ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00086 315 356 0.0014 T 11-10-2018 IPR001610 PAC motif ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Pfam PF00512 His Kinase A (phospho-acceptor) domain 500 562 7.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Pfam PF13426 PAS domain 255 354 4.2E-14 T 11-10-2018 IPR000014 PAS domain ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 607 711 2.0E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00387 606 712 6.0E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SMART SM00388 499 564 3.8E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 661 671 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 696 709 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 657 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 PRINTS PR00344 Bacterial sensor protein C-terminal signature 672 690 1.5E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SUPERFAMILY SSF55785 382 484 4.71E-26 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 248 363 1.5E-12 T 11-10-2018 IPR000014 PAS domain ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 378 491 2.3E-18 T 11-10-2018 IPR000014 PAS domain ABE28_012800 ce9ea748b0809a4829851057d80f142c 731 SUPERFAMILY SSF55874 554 712 3.27E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014555 01be623b015958b17ad2e4826afa864d 178 Gene3D G3DSA:1.20.58.500 5 101 6.8E-17 T 11-10-2018 ABE28_014555 01be623b015958b17ad2e4826afa864d 178 SUPERFAMILY SSF140663 3 129 4.05E-31 T 11-10-2018 IPR023203 TTHA0068-like superfamily ABE28_014555 01be623b015958b17ad2e4826afa864d 178 Pfam PF03745 Domain of unknown function (DUF309) 9 66 5.5E-22 T 11-10-2018 IPR005500 Protein of unknown function DUF309 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 Pfam PF00313 'Cold-shock' DNA-binding domain 2 65 4.3E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 SMART SM00357 3 65 3.3E-27 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 PIRSF PIRSF002599 1 65 2.1E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 39 57 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 4 19 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 PRINTS PR00050 Cold shock protein signature 24 33 1.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 Gene3D G3DSA:2.40.50.140 1 65 2.4E-30 T 11-10-2018 ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_005205 d32144fcb4a6376e1558d2ae947c2f56 65 SUPERFAMILY SSF50249 1 64 1.03E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_001590 3251f4a9291b2675e99783210c34f1cf 106 Pfam PF12986 Domain of unknown function (DUF3870) 8 99 8.0E-31 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 Pfam PF00498 FHA domain 31 98 8.4E-14 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 1.1E-8 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 Gene3D G3DSA:2.60.200.20 4 123 4.0E-20 T 11-10-2018 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 SMART SM00862 142 219 0.0016 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 SMART SM00240 29 82 2.6E-9 T 11-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 SUPERFAMILY SSF49879 8 110 1.78E-22 T 11-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 Gene3D G3DSA:1.10.10.10 125 226 2.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019490 c62b4a8928ec7faf4ba7f04662ff5b35 230 SUPERFAMILY SSF46894 128 220 2.27E-8 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_021355 f5f20e0ddeb011a347635513d4feb9bc 86 Pfam PF08958 Domain of unknown function (DUF1871) 10 85 4.9E-31 T 11-10-2018 IPR015053 Protein of unknown function DUF1871 ABE28_021355 f5f20e0ddeb011a347635513d4feb9bc 86 ProDom PD062625 YUGE 10 84 4.0E-15 T 11-10-2018 IPR015053 Protein of unknown function DUF1871 ABE28_021355 f5f20e0ddeb011a347635513d4feb9bc 86 SUPERFAMILY SSF116922 4 82 1.83E-24 T 11-10-2018 IPR023162 Apc36109-like domain superfamily ABE28_021355 f5f20e0ddeb011a347635513d4feb9bc 86 Gene3D G3DSA:1.10.340.20 1 86 1.3E-35 T 11-10-2018 IPR023162 Apc36109-like domain superfamily ABE28_008920 74d12a95e50c30669b0b4eba4aee3002 144 Pfam PF03592 Terminase small subunit 3 127 1.7E-30 T 11-10-2018 IPR005335 Terminase small subunit GO:0006323 ABE28_008920 74d12a95e50c30669b0b4eba4aee3002 144 Gene3D G3DSA:1.10.10.1400 1 64 2.8E-17 T 11-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 464 4.9E-257 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 SUPERFAMILY SSF47917 349 464 7.85E-51 T 11-10-2018 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 133 346 1.3E-67 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Gene3D G3DSA:1.10.1140.10 349 465 5.1E-56 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Gene3D G3DSA:2.40.10.170 1 77 1.3E-31 T 11-10-2018 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 75 1.8E-23 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 SMART SM00382 145 408 5.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 337 346 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 SUPERFAMILY SSF50615 1 77 5.76E-26 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 464 57.614 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 SUPERFAMILY SSF52540 79 351 1.06E-89 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022830 1c816f8666d7ac7f3c6a5ff8c17b714e 465 Gene3D G3DSA:3.40.50.300 79 347 4.2E-114 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:2.40.40.20 817 937 1.6E-25 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:3.40.50.740 323 777 6.6E-159 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 87 124 3.0E-11 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF01568 Molydopterin dinucleotide binding domain 824 931 1.6E-18 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF12838 4Fe-4S dicluster domain 150 208 1.9E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SUPERFAMILY SSF54862 126 218 1.19E-16 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 266 934 4.5E-242 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SMART SM00929 85 126 6.0E-13 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SMART SM00926 261 315 3.3E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF00384 Molybdopterin oxidoreductase 318 741 9.0E-86 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:3.10.20.740 6 126 3.4E-29 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:2.20.25.90 262 316 1.8E-18 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:3.30.70.20 129 212 2.2E-19 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Gene3D G3DSA:3.40.228.10 396 595 6.6E-159 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 PIRSF PIRSF036643 1 968 0.0 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 263 315 8.9E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 7 77 1.2E-13 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SUPERFAMILY SSF53706 256 778 1.13E-190 T 11-10-2018 ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SUPERFAMILY SSF50692 789 936 6.33E-33 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_022030 5fa5c02fb5b2bae7743350d2aa09f47a 979 SUPERFAMILY SSF54292 7 128 4.02E-31 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 Pfam PF00501 AMP-binding enzyme 22 423 5.0E-82 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 Gene3D G3DSA:3.40.50.12780 6 419 2.5E-112 T 11-10-2018 ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 Gene3D G3DSA:3.30.300.310 420 524 3.8E-28 T 11-10-2018 ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 511 1.1E-23 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_017215 24a62673a07c9831793a56047a8dc78e 527 SUPERFAMILY SSF56801 20 524 3.27E-141 T 11-10-2018 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 125 198 4.6E-21 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Gene3D G3DSA:2.40.110.10 124 237 1.7E-33 T 11-10-2018 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 121 5.5E-23 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 SUPERFAMILY SSF47203 230 384 6.93E-55 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Gene3D G3DSA:1.10.540.10 1 123 2.6E-28 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Gene3D G3DSA:1.20.140.10 238 389 3.5E-52 T 11-10-2018 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 PIRSF PIRSF016578 38 90 0.096 T 11-10-2018 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 PIRSF PIRSF016578 141 382 4.4E-17 T 11-10-2018 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 339 358 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 234 380 7.7E-46 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_010785 916a18fb8f142bee996b947d087de50a 391 SUPERFAMILY SSF56645 2 240 1.7E-64 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_007370 d701b0acc6cfa4d669ce2d51899a691e 149 Gene3D G3DSA:1.20.1500.10 4 126 1.1E-25 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_007370 d701b0acc6cfa4d669ce2d51899a691e 149 SUPERFAMILY SSF158622 4 126 1.57E-30 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_007370 d701b0acc6cfa4d669ce2d51899a691e 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 10 115 3.0E-18 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Gene3D G3DSA:2.40.110.10 133 223 1.7E-18 T 11-10-2018 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 PIRSF PIRSF016578 2 380 3.5E-33 T 11-10-2018 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Gene3D G3DSA:1.10.540.10 5 120 3.6E-18 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 9 93 2.8E-7 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Gene3D G3DSA:1.20.140.10 235 379 5.4E-31 T 11-10-2018 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 SUPERFAMILY SSF56645 22 223 9.82E-37 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 SUPERFAMILY SSF47203 238 378 2.09E-23 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 215 7.4E-12 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_011480 81da989b3e1ceb5987d552eef3b478be 380 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 242 360 8.3E-16 T 11-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 Gene3D G3DSA:1.10.3210.10 1 186 3.7E-58 T 11-10-2018 ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 TIGRFAM TIGR00277 HDIG: HDIG domain 19 110 1.9E-7 T 11-10-2018 IPR006675 HDIG domain ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 1.5E-67 T 11-10-2018 IPR005249 Conserved hypothetical protein CHP00488 ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 SMART SM00471 14 141 2.4E-8 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 SUPERFAMILY SSF109604 4 180 3.14E-34 T 11-10-2018 ABE28_015595 61c83e5a48338c3a88a3d0410a8e84a6 190 Pfam PF01966 HD domain 18 130 3.7E-17 T 11-10-2018 IPR006674 HD domain ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 142 8.0E-50 T 11-10-2018 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 142 2.4E-63 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 Gene3D G3DSA:3.40.50.9100 1 147 1.2E-66 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 148 67.143 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 Pfam PF01220 Dehydroquinase class II 3 140 1.0E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 PIRSF PIRSF001399 1 146 7.2E-62 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_015020 c96a423ac3a62b0753c7182508eefd67 148 SUPERFAMILY SSF52304 3 145 4.71E-60 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 Pfam PF00107 Zinc-binding dehydrogenase 170 296 4.6E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 Gene3D G3DSA:3.40.50.720 148 281 2.0E-85 T 11-10-2018 ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 1.1E-29 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 SUPERFAMILY SSF51735 134 302 1.45E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 Gene3D G3DSA:3.90.180.10 16 321 2.0E-85 T 11-10-2018 ABE28_012470 72f62a43e4537a2b693f03cfa2c8d84d 337 SUPERFAMILY SSF50129 1 169 1.02E-43 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 Gene3D G3DSA:3.40.50.720 1 255 2.1E-67 T 11-10-2018 ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.1E-5 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.0E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 SUPERFAMILY SSF51735 3 247 3.26E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_013080 91048796b79b2b3efc3005e14fb3fc27 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 247 4.3E-48 T 11-10-2018 ABE28_021715 e174d3bcb5efcdd11da9439dcf1b0033 282 Gene3D G3DSA:3.20.20.410 1 282 5.2E-94 T 11-10-2018 IPR036520 UPF0759 superfamily ABE28_021715 e174d3bcb5efcdd11da9439dcf1b0033 282 Pfam PF01904 Protein of unknown function DUF72 16 265 1.0E-59 T 11-10-2018 IPR002763 Protein of unknown function DUF72 ABE28_021715 e174d3bcb5efcdd11da9439dcf1b0033 282 SUPERFAMILY SSF117396 1 269 6.02E-83 T 11-10-2018 IPR036520 UPF0759 superfamily ABE28_001665 243f44e00a9b48b9f60c87e8130236a5 448 Pfam PF02447 GntP family permease 1 446 2.3E-177 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_001665 243f44e00a9b48b9f60c87e8130236a5 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 4.7E-199 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_001665 243f44e00a9b48b9f60c87e8130236a5 448 PIRSF PIRSF002746 1 448 6.4E-176 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 Pfam PF14697 4Fe-4S dicluster domain 335 397 1.0E-21 T 11-10-2018 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 317 1.5E-56 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 SUPERFAMILY SSF51395 1 317 6.33E-70 T 11-10-2018 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 SUPERFAMILY SSF54862 335 405 1.72E-12 T 11-10-2018 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 Pfam PF01180 Dihydroorotate dehydrogenase 84 302 4.7E-30 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 Gene3D G3DSA:3.20.20.70 4 303 8.4E-103 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_001015 e5b292ce5c8dcb672b2b3ecb379fe4a0 428 Gene3D G3DSA:3.30.70.20 304 413 9.1E-22 T 11-10-2018 ABE28_021235 75fa664b695c90f550450d9af6b9941b 192 Gene3D G3DSA:1.20.140.160 68 180 1.5E-11 T 11-10-2018 ABE28_021235 75fa664b695c90f550450d9af6b9941b 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 54 177 1.5E-12 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_021235 75fa664b695c90f550450d9af6b9941b 192 SUPERFAMILY SSF88659 118 183 1.87E-13 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_021235 75fa664b695c90f550450d9af6b9941b 192 Pfam PF04545 Sigma-70, region 4 127 176 6.4E-10 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_022825 af597c4afb8768841094268116fff2a9 133 SUPERFAMILY SSF51344 2 84 1.16E-24 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 Gene3D G3DSA:2.60.15.10 1 88 2.8E-32 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 4.5E-29 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 SUPERFAMILY SSF46604 87 132 6.02E-8 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.336 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 131 2.1E-37 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 7.0E-30 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022825 af597c4afb8768841094268116fff2a9 133 Gene3D G3DSA:1.20.5.440 89 133 4.9E-14 T 11-10-2018 ABE28_022825 af597c4afb8768841094268116fff2a9 133 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 131 3.4E-13 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 Pfam PF02223 Thymidylate kinase 10 199 1.3E-58 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 1.2E-66 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 30.883 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 Gene3D G3DSA:3.40.50.300 1 208 9.2E-69 T 11-10-2018 ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 ABE28_000115 f31a4fe00c9ad2e0812de8442176b3fb 213 SUPERFAMILY SSF52540 1 209 1.56E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016190 e86a9e65936ae215c45b002a17f2cc56 227 Gene3D G3DSA:3.30.240.20 168 226 2.7E-14 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_016190 e86a9e65936ae215c45b002a17f2cc56 227 Pfam PF04239 Protein of unknown function (DUF421) 97 201 1.1E-36 T 11-10-2018 IPR007353 Protein of unknown function DUF421 ABE28_016190 e86a9e65936ae215c45b002a17f2cc56 227 Gene3D G3DSA:3.30.240.20 89 162 1.2E-25 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Gene3D G3DSA:2.160.10.10 85 236 1.1E-52 T 11-10-2018 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 2.7E-11 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 1.9E-117 T 11-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 1.6E-9 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 6.4E-4 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 6.2E-35 T 11-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Gene3D G3DSA:3.30.70.250 1 84 3.7E-34 T 11-10-2018 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 46.12 T 11-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 ABE28_007105 50f13fd28260aa90185bd2bbde9e46c1 236 SUPERFAMILY SSF51161 89 225 7.9E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 Pfam PF01047 MarR family 28 85 2.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 9.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 9.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 9.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 9.7E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 Gene3D G3DSA:1.10.10.10 2 145 2.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 SUPERFAMILY SSF46785 4 140 8.99E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002555 29e9fb4a3dabb066b0c134548b628a60 150 SMART SM00347 21 121 1.4E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 SUPERFAMILY SSF50193 1 122 1.83E-50 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 SMART SM01374 1 122 4.9E-86 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 9.0E-55 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 Gene3D G3DSA:2.40.150.20 1 122 1.2E-53 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.1E-58 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 ABE28_000635 44c523aa86a58de7f7d4e253218a63c7 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.755 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 Gene3D G3DSA:3.40.50.1100 47 146 1.3E-117 T 11-10-2018 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 TIGRFAM TIGR01136 cysKM: cysteine synthase 9 306 2.3E-125 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 306 2.5E-132 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 Gene3D G3DSA:3.40.50.1100 8 302 1.3E-117 T 11-10-2018 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 SUPERFAMILY SSF53686 4 306 1.13E-99 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_005645 785101d86a69b676da6da01a08061c2b 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 35 53 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 ABE28_005645 785101d86a69b676da6da01a08061c2b 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 294 2.4E-68 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 SUPERFAMILY SSF51735 2 247 2.72E-79 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.2E-33 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 Gene3D G3DSA:3.40.50.720 1 249 3.2E-79 T 11-10-2018 ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003640 f55fa5ef5b231330211cd677239b7825 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 9.2E-67 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 169 227 2.6E-12 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 247 390 7.8E-29 T 11-10-2018 IPR032810 CCA-adding enzyme, C-terminal ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Gene3D G3DSA:1.10.246.80 339 397 2.7E-22 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 SUPERFAMILY SSF81891 141 393 1.83E-47 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Gene3D G3DSA:3.30.460.10 3 144 1.1E-51 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Hamap MF_01263 CCA-adding enzyme [cca]. 2 395 39.289 T 11-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 SUPERFAMILY SSF81301 8 138 4.14E-41 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Gene3D G3DSA:1.10.110.30 145 240 4.7E-29 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Gene3D G3DSA:1.20.58.560 243 338 3.4E-11 T 11-10-2018 ABE28_014150 548526dedcd7fa49ed6887e6e6672a87 397 Pfam PF01743 Poly A polymerase head domain 22 141 1.6E-36 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 ABE28_000870 e205fbfff71c1deed138cd6c67de0598 60 Gene3D G3DSA:1.20.58.990 1 59 2.5E-8 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_000870 e205fbfff71c1deed138cd6c67de0598 60 SUPERFAMILY SSF140500 1 51 9.55E-13 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_000870 e205fbfff71c1deed138cd6c67de0598 60 Pfam PF09388 Spo0E like sporulation regulatory protein 6 45 5.6E-11 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 ABE28_004265 801d9a04a8e8f0bc381108a76d974531 333 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 268 281 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_004265 801d9a04a8e8f0bc381108a76d974531 333 Pfam PF00294 pfkB family carbohydrate kinase 22 308 7.0E-33 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_004265 801d9a04a8e8f0bc381108a76d974531 333 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 56 80 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_004265 801d9a04a8e8f0bc381108a76d974531 333 Gene3D G3DSA:3.40.1190.20 18 331 1.1E-60 T 11-10-2018 IPR029056 Ribokinase-like ABE28_004265 801d9a04a8e8f0bc381108a76d974531 333 SUPERFAMILY SSF53613 21 310 2.34E-42 T 11-10-2018 IPR029056 Ribokinase-like ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 Gene3D G3DSA:3.30.1490.20 137 228 3.8E-20 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 Gene3D G3DSA:3.40.50.20 1 136 4.7E-65 T 11-10-2018 ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 Gene3D G3DSA:3.30.470.20 229 371 4.3E-47 T 11-10-2018 ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 Pfam PF13535 ATP-grasp domain 172 333 2.4E-17 T 11-10-2018 ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 SUPERFAMILY SSF56059 119 360 1.71E-27 T 11-10-2018 ABE28_019130 bfc8682e36ef30dcc6d55f7c2eb86676 473 Gene3D G3DSA:3.90.1170.60 373 467 1.9E-26 T 11-10-2018 ABE28_010125 0891471599146e7bdde47456221f58cc 221 Gene3D G3DSA:3.20.20.70 1 218 1.5E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_010125 0891471599146e7bdde47456221f58cc 221 SUPERFAMILY SSF51569 1 214 1.03E-83 T 11-10-2018 ABE28_010125 0891471599146e7bdde47456221f58cc 221 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 37.604 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 ABE28_010125 0891471599146e7bdde47456221f58cc 221 SMART SM01133 2 214 3.8E-103 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_010125 0891471599146e7bdde47456221f58cc 221 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 212 9.6E-89 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_010125 0891471599146e7bdde47456221f58cc 221 PIRSF PIRSF001357 1 220 2.0E-79 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_010125 0891471599146e7bdde47456221f58cc 221 Pfam PF01791 DeoC/LacD family aldolase 6 212 8.2E-20 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Pfam PF07497 Rho termination factor, RNA-binding domain 53 126 4.3E-31 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SMART SM00357 54 119 3.8E-20 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 157 361 2.0E-18 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Pfam PF07498 Rho termination factor, N-terminal domain 8 49 3.0E-16 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Gene3D G3DSA:1.10.720.10 1 47 2.2E-20 T 11-10-2018 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 415 221.299 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 413 5.5E-203 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SMART SM00959 7 49 8.3E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Gene3D G3DSA:3.40.50.300 131 413 4.3E-121 T 11-10-2018 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SMART SM00382 168 353 8.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SUPERFAMILY SSF52540 91 369 3.24E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SUPERFAMILY SSF50249 51 126 6.0E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022950 4b4238b7ec27498814081102a93cb703 429 Gene3D G3DSA:2.40.50.140 48 124 5.5E-29 T 11-10-2018 ABE28_022950 4b4238b7ec27498814081102a93cb703 429 SUPERFAMILY SSF68912 4 49 3.61E-11 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily ABE28_012720 4bae402477ef92658b41a79cbbce3068 107 SUPERFAMILY SSF46785 6 104 2.1E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_012720 4bae402477ef92658b41a79cbbce3068 107 Pfam PF01638 HxlR-like helix-turn-helix 16 103 2.8E-30 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type ABE28_012720 4bae402477ef92658b41a79cbbce3068 107 Gene3D G3DSA:1.10.10.10 3 107 3.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005270 a42dd5fa9b168037e18f68af64fc8e58 354 SUPERFAMILY SSF51412 6 340 7.63E-62 T 11-10-2018 ABE28_005270 a42dd5fa9b168037e18f68af64fc8e58 354 Gene3D G3DSA:3.20.20.70 1 342 7.2E-114 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_005270 a42dd5fa9b168037e18f68af64fc8e58 354 Pfam PF03060 Nitronate monooxygenase 5 336 9.5E-99 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 4.2E-7 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.2E-7 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 SUPERFAMILY SSF56425 231 353 8.82E-32 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PIRSF PIRSF000171 3 240 3.5E-17 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PIRSF PIRSF000171 336 574 5.3E-14 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 Gene3D G3DSA:3.90.700.10 258 367 3.6E-120 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 SUPERFAMILY SSF51905 6 429 6.49E-61 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 Gene3D G3DSA:3.50.50.60 6 403 3.6E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 4.3E-43 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 Gene3D G3DSA:1.20.58.100 424 539 2.0E-34 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 Pfam PF00890 FAD binding domain 6 392 7.7E-83 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 SUPERFAMILY SSF46977 443 579 3.14E-44 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.0E-8 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 1.0E-8 T 11-10-2018 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 1.0E-278 T 11-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 ABE28_016665 ac2b3526f50b83251ca7ff337f023746 583 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Gene3D G3DSA:1.10.490.70 1 150 3.4E-40 T 11-10-2018 IPR038284 Histidine kinase, N-terminal domain superfamily ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 SUPERFAMILY SSF55874 210 366 3.67E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Pfam PF09385 Histidine kinase N terminal 8 134 1.1E-19 T 11-10-2018 IPR018984 Histidine kinase, N-terminal ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 330 4.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 331 349 4.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 PRINTS PR00344 Bacterial sensor protein C-terminal signature 302 316 4.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Pfam PF00512 His Kinase A (phospho-acceptor) domain 158 218 8.6E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 SUPERFAMILY SSF47384 151 218 5.1E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 263 367 6.9E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Gene3D G3DSA:1.10.287.130 160 215 3.5E-13 T 11-10-2018 ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 SMART SM00387 262 366 1.5E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 Gene3D G3DSA:3.30.565.10 221 369 1.3E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_005345 e8f0cd11c104e028e97b8de036ec8292 369 SMART SM00388 157 219 9.9E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_021370 35f06bfad8d605e2ad2085ec8617dcad 327 Gene3D G3DSA:3.40.50.1980 68 153 2.0E-28 T 11-10-2018 ABE28_021370 35f06bfad8d605e2ad2085ec8617dcad 327 SUPERFAMILY SSF53807 67 326 1.18E-52 T 11-10-2018 ABE28_021370 35f06bfad8d605e2ad2085ec8617dcad 327 Gene3D G3DSA:3.40.50.1980 155 327 8.4E-45 T 11-10-2018 ABE28_021370 35f06bfad8d605e2ad2085ec8617dcad 327 Pfam PF01497 Periplasmic binding protein 72 302 1.1E-32 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_001695 97659a491f9e928e985fe8ad6c57b38d 342 SUPERFAMILY SSF81345 12 340 9.68E-86 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_001695 97659a491f9e928e985fe8ad6c57b38d 342 Gene3D G3DSA:1.10.3470.10 12 342 7.5E-101 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_001695 97659a491f9e928e985fe8ad6c57b38d 342 Pfam PF01032 FecCD transport family 23 340 4.4E-94 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_002110 4752caceb36883065b71bc1508c6c866 216 Pfam PF07987 Domain of unkown function (DUF1775) 26 139 7.9E-20 T 11-10-2018 IPR012533 YcnI-like ABE28_002110 4752caceb36883065b71bc1508c6c866 216 Gene3D G3DSA:2.60.40.2230 24 169 1.2E-33 T 11-10-2018 IPR038507 YcnI-like superfamily ABE28_015675 1d9f66e40810ea25a4e339930bca8531 231 Gene3D G3DSA:3.40.50.1580 1 231 5.5E-70 T 11-10-2018 ABE28_015675 1d9f66e40810ea25a4e339930bca8531 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 4.8E-112 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_015675 1d9f66e40810ea25a4e339930bca8531 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.31 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_015675 1d9f66e40810ea25a4e339930bca8531 231 SUPERFAMILY SSF53167 1 227 1.83E-72 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABE28_015675 1d9f66e40810ea25a4e339930bca8531 231 Pfam PF01048 Phosphorylase superfamily 2 227 1.9E-51 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABE28_006850 dd5bae9f5cabf7022e39a6583b645bbc 260 Gene3D G3DSA:1.10.12.10 202 258 1.5E-20 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_006850 dd5bae9f5cabf7022e39a6583b645bbc 260 SUPERFAMILY SSF52096 2 258 3.58E-80 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_006850 dd5bae9f5cabf7022e39a6583b645bbc 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 258 2.1E-64 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_006850 dd5bae9f5cabf7022e39a6583b645bbc 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_006850 dd5bae9f5cabf7022e39a6583b645bbc 260 Gene3D G3DSA:3.90.226.10 1 201 3.5E-68 T 11-10-2018 ABE28_023560 9c9b11efed19d1fea03aaa48bf813cfd 606 Gene3D G3DSA:1.10.274.90 4 133 4.6E-21 T 11-10-2018 ABE28_023560 9c9b11efed19d1fea03aaa48bf813cfd 606 Pfam PF06276 Ferric iron reductase FhuF-like transporter 419 579 4.1E-40 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain ABE28_023560 9c9b11efed19d1fea03aaa48bf813cfd 606 Pfam PF04183 IucA / IucC family 148 397 1.3E-71 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ABE28_023560 9c9b11efed19d1fea03aaa48bf813cfd 606 Gene3D G3DSA:1.10.510.40 386 580 7.1E-59 T 11-10-2018 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 360 1.1E-134 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 265 36.532 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 7.1E-50 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 7.1E-50 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 7.1E-50 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 7.1E-50 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 7.1E-50 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 SMART SM00359 277 355 7.2E-14 T 11-10-2018 IPR002478 PUA domain GO:0003723 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 Gene3D G3DSA:3.40.1160.10 1 259 1.0E-84 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 SUPERFAMILY SSF88697 277 359 3.92E-16 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 Pfam PF01472 PUA domain 277 345 1.0E-15 T 11-10-2018 IPR002478 PUA domain GO:0003723 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 Gene3D G3DSA:2.30.130.10 266 361 3.8E-23 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 SUPERFAMILY SSF53633 4 255 1.57E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 Pfam PF00696 Amino acid kinase family 4 233 8.5E-45 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_013855 59f94632d34f25a89ad724d3590a8cf8 362 PIRSF PIRSF000729 1 360 3.4E-131 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SUPERFAMILY SSF110836 2 88 1.1E-23 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SMART SM00932 4 90 1.4E-29 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 Gene3D G3DSA:1.25.10.10 189 376 3.0E-24 T 11-10-2018 IPR011989 Armadillo-like helical ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SMART SM00567 E-Z type HEAT repeats 249 278 0.033 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SMART SM00567 E-Z type HEAT repeats 311 340 1.8 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SMART SM00567 E-Z type HEAT repeats 280 309 440.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 Gene3D G3DSA:3.30.1370.70 1 92 1.5E-28 T 11-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 Pfam PF13769 Virulence factor 108 188 7.4E-29 T 11-10-2018 IPR025989 Virulence factor domain ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 SUPERFAMILY SSF48371 201 373 1.01E-31 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 87 2.0E-21 T 11-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal ABE28_013430 d7bdd191e7346ff55de8d6c2b3834b67 379 Pfam PF13646 HEAT repeats 268 341 8.2E-10 T 11-10-2018 ABE28_010830 51d714bc865bcb54263218778d197c10 651 Gene3D G3DSA:3.20.20.300 28 423 3.9E-157 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ABE28_010830 51d714bc865bcb54263218778d197c10 651 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 44 393 4.7E-116 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ABE28_010830 51d714bc865bcb54263218778d197c10 651 Gene3D G3DSA:3.40.50.1700 424 645 2.3E-57 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 ABE28_010830 51d714bc865bcb54263218778d197c10 651 SUPERFAMILY SSF52279 439 639 1.31E-10 T 11-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 ABE28_010830 51d714bc865bcb54263218778d197c10 651 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 439 639 2.9E-17 T 11-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 ABE28_010830 51d714bc865bcb54263218778d197c10 651 SUPERFAMILY SSF51445 31 437 4.42E-101 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_010830 51d714bc865bcb54263218778d197c10 651 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 305 322 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 130 3.4E-27 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 SUPERFAMILY SSF53223 4 143 1.54E-48 T 11-10-2018 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 11-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 Gene3D G3DSA:3.40.50.10860 10 343 1.1E-152 T 11-10-2018 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 6.6E-7 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 217 348 1.5E-12 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 SMART SM00839 144 351 1.8E-72 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 PIRSF PIRSF000188 1 353 1.6E-168 T 11-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 Gene3D G3DSA:3.40.50.720 134 336 1.1E-152 T 11-10-2018 ABE28_014875 bfd8ab0cf4c9d916df4a17d7616c438a 365 SUPERFAMILY SSF51735 141 348 1.18E-59 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 SUPERFAMILY SSF53383 3 377 1.34E-104 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 Gene3D G3DSA:1.10.260.50 15 278 6.6E-145 T 11-10-2018 ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 Gene3D G3DSA:3.90.1150.10 4 369 6.6E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 PIRSF PIRSF005572 1 380 9.2E-128 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 Pfam PF00266 Aminotransferase class-V 4 365 1.4E-83 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_015790 026e10000f1ba028ba142edf155c7bf5 381 Gene3D G3DSA:3.40.640.10 61 235 6.6E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_015465 61632c44ff64993a96005ce328c12ff1 147 SUPERFAMILY SSF89095 1 146 3.92E-44 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 ABE28_015465 61632c44ff64993a96005ce328c12ff1 147 Gene3D G3DSA:1.10.1510.10 1 90 3.5E-29 T 11-10-2018 ABE28_015465 61632c44ff64993a96005ce328c12ff1 147 Pfam PF09424 Yqey-like protein 5 146 1.7E-54 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 ABE28_015465 61632c44ff64993a96005ce328c12ff1 147 Gene3D G3DSA:1.10.10.410 91 147 1.1E-26 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Pfam PF08448 PAS fold 18 117 1.3E-7 T 11-10-2018 IPR013656 PAS fold-4 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 SUPERFAMILY SSF55785 14 119 7.33E-11 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 SUPERFAMILY SSF46689 414 460 1.12E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 234 249 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Pfam PF00158 Sigma-54 interaction domain 147 315 2.4E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 SUPERFAMILY SSF52540 147 390 9.45E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Gene3D G3DSA:1.10.10.60 409 463 4.5E-6 T 11-10-2018 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 SMART SM00382 167 311 2.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Gene3D G3DSA:3.40.50.300 135 318 1.4E-69 T 11-10-2018 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Gene3D G3DSA:3.30.450.20 3 134 6.5E-14 T 11-10-2018 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 Gene3D G3DSA:1.10.8.60 319 385 7.2E-21 T 11-10-2018 ABE28_004735 3ab983f913510d24c9a89f504e954c9e 466 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 171 184 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 7.8E-114 T 11-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 SUPERFAMILY SSF53187 6 419 4.29E-60 T 11-10-2018 ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 Pfam PF01546 Peptidase family M20/M25/M40 97 414 1.5E-36 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 Pfam PF07687 Peptidase dimerisation domain 202 314 2.9E-16 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 Gene3D G3DSA:3.30.70.360 204 330 2.5E-137 T 11-10-2018 ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 Gene3D G3DSA:3.40.630.10 27 418 2.5E-137 T 11-10-2018 ABE28_013270 5cb670622eafcba35bfc5e8d7a625904 423 SUPERFAMILY SSF55031 203 310 1.42E-14 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 669 679 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 704 717 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 651 665 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 PRINTS PR00344 Bacterial sensor protein C-terminal signature 680 698 2.7E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:3.30.450.20 25 124 2.0E-7 T 11-10-2018 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF55785 248 354 8.72E-16 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00388 507 571 2.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF00512 His Kinase A (phospho-acceptor) domain 509 569 6.3E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF55874 564 718 1.44E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 616 719 1.6E-20 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF55785 367 479 4.89E-11 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF55785 136 236 3.14E-13 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00091 382 449 3.0 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00091 262 330 2.4E-7 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00091 23 88 0.0093 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00091 142 208 1.0E-7 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:1.10.287.130 493 570 3.6E-18 T 11-10-2018 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:3.30.450.20 139 249 1.0E-11 T 11-10-2018 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF47384 502 569 1.28E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SMART SM00387 613 720 6.6E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF00989 PAS fold 265 361 4.4E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF00989 PAS fold 147 222 5.7E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:3.30.450.20 368 489 8.3E-10 T 11-10-2018 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:3.30.450.20 250 367 3.8E-15 T 11-10-2018 ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 SUPERFAMILY SSF55785 16 85 3.14E-6 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 259 370 7.2E-10 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 208 5.6E-10 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Gene3D G3DSA:3.30.565.10 573 720 1.6E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF13188 PAS domain 383 424 0.025 T 11-10-2018 IPR000014 PAS domain ABE28_006900 c3e7c5d65aa84dfd42df0ab61f0cf86a 720 Pfam PF13188 PAS domain 25 59 3.5E-5 T 11-10-2018 IPR000014 PAS domain ABE28_004910 df3980b9468edddd4dc87dacc82d97f6 262 Pfam PF13624 SurA N-terminal domain 72 186 1.2E-16 T 11-10-2018 ABE28_004910 df3980b9468edddd4dc87dacc82d97f6 262 Gene3D G3DSA:1.10.4030.30 69 261 9.6E-26 T 11-10-2018 ABE28_004910 df3980b9468edddd4dc87dacc82d97f6 262 SUPERFAMILY SSF109998 73 234 2.04E-27 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABE28_019790 b9f41f579edd5e3a5680fb09335a0caa 157 Gene3D G3DSA:1.10.260.40 3 67 1.7E-8 T 11-10-2018 ABE28_019790 b9f41f579edd5e3a5680fb09335a0caa 157 SUPERFAMILY SSF47413 7 65 2.68E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_019790 b9f41f579edd5e3a5680fb09335a0caa 157 Pfam PF01381 Helix-turn-helix 15 62 4.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_019790 b9f41f579edd5e3a5680fb09335a0caa 157 SMART SM00530 13 68 2.5E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_006875 dee99ded328d03d6af2b366edd529df8 259 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 258 2.8E-61 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_006875 dee99ded328d03d6af2b366edd529df8 259 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 100 120 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_006875 dee99ded328d03d6af2b366edd529df8 259 Gene3D G3DSA:1.10.12.10 202 259 2.3E-23 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_006875 dee99ded328d03d6af2b366edd529df8 259 Gene3D G3DSA:3.90.226.10 2 200 1.3E-64 T 11-10-2018 ABE28_006875 dee99ded328d03d6af2b366edd529df8 259 SUPERFAMILY SSF52096 4 258 3.37E-82 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022875 66070bee07177ad8e3fcdd4ac3a04b5c 380 Gene3D G3DSA:3.40.50.2000 7 362 3.8E-149 T 11-10-2018 ABE28_022875 66070bee07177ad8e3fcdd4ac3a04b5c 380 SUPERFAMILY SSF53756 4 374 1.88E-131 T 11-10-2018 ABE28_022875 66070bee07177ad8e3fcdd4ac3a04b5c 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 367 2.4E-159 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABE28_022875 66070bee07177ad8e3fcdd4ac3a04b5c 380 Gene3D G3DSA:3.40.50.2000 191 351 3.8E-149 T 11-10-2018 ABE28_022875 66070bee07177ad8e3fcdd4ac3a04b5c 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 364 3.6E-116 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_023300 7f667e8be9dfd981562ef14f51abde9f 207 SUPERFAMILY SSF52540 2 206 1.78E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023300 7f667e8be9dfd981562ef14f51abde9f 207 Pfam PF00005 ABC transporter 17 157 9.7E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023300 7f667e8be9dfd981562ef14f51abde9f 207 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023300 7f667e8be9dfd981562ef14f51abde9f 207 SMART SM00382 26 205 6.3E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023300 7f667e8be9dfd981562ef14f51abde9f 207 Gene3D G3DSA:3.40.50.300 1 207 1.1E-52 T 11-10-2018 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 Pfam PF00480 ROK family 7 319 3.6E-74 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 319 1.5E-117 T 11-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 Gene3D G3DSA:3.30.420.40 130 303 4.7E-110 T 11-10-2018 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 SUPERFAMILY SSF53067 5 319 6.14E-72 T 11-10-2018 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 Gene3D G3DSA:3.30.420.40 8 316 4.7E-110 T 11-10-2018 ABE28_015185 4615b2a810cbb25066425b512806d3bd 321 ProSitePatterns PS01125 ROK family signature. 139 166 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_018615 39e5087bae25bcca26024a9e58f40953 273 Pfam PF01048 Phosphorylase superfamily 23 249 1.4E-34 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABE28_018615 39e5087bae25bcca26024a9e58f40953 273 SUPERFAMILY SSF53167 23 250 7.33E-42 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABE28_018615 39e5087bae25bcca26024a9e58f40953 273 Gene3D G3DSA:3.40.50.1580 19 270 8.2E-79 T 11-10-2018 ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 350 1.7E-154 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 358 151.163 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 SUPERFAMILY SSF51658 1 347 5.88E-82 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 351 1.2E-156 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 PIRSF PIRSF016049 1 355 4.5E-121 T 11-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 ABE28_012500 8aceaf71587c5a426e12211ce5ba1ff0 358 Gene3D G3DSA:3.20.20.150 1 354 5.7E-139 T 11-10-2018 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 Pfam PF00072 Response regulator receiver domain 176 296 3.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 SUPERFAMILY SSF50341 7 151 6.54E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 SMART SM00260 13 149 7.9E-31 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 Gene3D G3DSA:2.30.30.40 19 143 5.5E-34 T 11-10-2018 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 Gene3D G3DSA:2.40.50.180 34 149 5.5E-34 T 11-10-2018 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 Pfam PF01584 CheW-like domain 18 150 1.9E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 PIRSF PIRSF002867 1 301 2.5E-101 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 Gene3D G3DSA:3.40.50.2300 168 301 1.2E-25 T 11-10-2018 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 SMART SM00448 174 296 3.8E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_007015 b59c522a35325b55404d9d6096eb2801 301 SUPERFAMILY SSF52172 172 299 2.42E-25 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 Gene3D G3DSA:3.30.465.40 4 235 1.5E-68 T 11-10-2018 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 SUPERFAMILY SSF56176 6 215 2.15E-66 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 Gene3D G3DSA:3.30.70.2740 333 415 1.5E-16 T 11-10-2018 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 Pfam PF01565 FAD binding domain 39 178 5.3E-36 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 Gene3D G3DSA:1.10.45.10 416 456 1.3E-11 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 SUPERFAMILY SSF55103 218 458 5.23E-67 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABE28_011670 21673d40b43e01169022d5fb5037e9b8 468 Pfam PF02913 FAD linked oxidases, C-terminal domain 214 455 3.1E-70 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 SUPERFAMILY SSF51556 61 491 1.19E-35 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 Gene3D G3DSA:3.20.20.140 62 490 4.1E-143 T 11-10-2018 ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 SUPERFAMILY SSF51338 3 532 7.62E-24 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 Gene3D G3DSA:2.30.40.10 9 506 4.1E-143 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 Pfam PF07969 Amidohydrolase family 50 531 8.4E-95 T 11-10-2018 IPR013108 Amidohydrolase 3 ABE28_011340 8452bd171e6a37e41b1b4497850f1958 540 Gene3D G3DSA:3.10.310.70 80 200 4.1E-143 T 11-10-2018 ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 Gene3D G3DSA:3.90.870.10 3 218 4.7E-81 T 11-10-2018 ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 SUPERFAMILY SSF55821 20 209 6.41E-63 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 Gene3D G3DSA:3.40.50.11030 220 350 8.4E-39 T 11-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 19 214 2.1E-64 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 3.3E-28 T 11-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 Pfam PF01300 Telomere recombination 27 203 3.7E-57 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 ABE28_022915 840bcbc0a2d90c118de538d163de00bf 350 PIRSF PIRSF004930 1 347 3.7E-130 T 11-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 ABE28_000120 5e77b153cc91e70b18c96843ee0717b2 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 6.8E-53 T 11-10-2018 IPR010375 Cyclic-di-AMP receptor ABE28_000120 5e77b153cc91e70b18c96843ee0717b2 109 SUPERFAMILY SSF54913 1 107 8.45E-13 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta ABE28_000120 5e77b153cc91e70b18c96843ee0717b2 109 Gene3D G3DSA:3.30.70.120 1 103 3.2E-44 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_021490 83268917cf9a1b8b482f20f66981ef8e 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 5.4E-20 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ABE28_021490 83268917cf9a1b8b482f20f66981ef8e 94 PIRSF PIRSF028784 1 92 8.7E-34 T 11-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 SUPERFAMILY SSF54631 65 208 7.96E-31 T 11-10-2018 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 SMART SM01240 9 474 0.0 T 11-10-2018 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 Pfam PF00571 CBS domain 97 144 3.9E-7 T 11-10-2018 IPR000644 CBS domain ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 Pfam PF00571 CBS domain 155 204 4.1E-6 T 11-10-2018 IPR000644 CBS domain ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 PIRSF PIRSF000130 1 487 3.4E-209 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 84.237 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 SMART SM00116 98 148 2.4E-8 T 11-10-2018 IPR000644 CBS domain ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 SMART SM00116 161 209 6.2E-8 T 11-10-2018 IPR000644 CBS domain ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 3.3E-200 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 SUPERFAMILY SSF51412 5 478 1.83E-125 T 11-10-2018 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 Gene3D G3DSA:3.20.20.70 1 487 1.7E-224 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_000020 75f0f27b3810a9368566b7209581e0fc 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 1.6E-164 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ABE28_020625 de624646b74070d850e8b35ee014f202 170 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 43 98 9.6E-13 T 11-10-2018 IPR018958 Knr4/Smi1-like domain ABE28_020625 de624646b74070d850e8b35ee014f202 170 SMART SM00860 43 157 7.6E-11 T 11-10-2018 IPR018958 Knr4/Smi1-like domain ABE28_020625 de624646b74070d850e8b35ee014f202 170 SUPERFAMILY SSF160631 37 168 2.22E-17 T 11-10-2018 ABE28_020625 de624646b74070d850e8b35ee014f202 170 Gene3D G3DSA:3.40.1580.10 33 168 8.3E-18 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 4.3E-24 T 11-10-2018 IPR024568 Ribonuclease HIII, N-terminal ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 9 305 9.5E-91 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 313 33.553 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 Gene3D G3DSA:3.30.310.10 1 90 5.4E-26 T 11-10-2018 IPR012295 TBP domain superfamily ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 Pfam PF01351 Ribonuclease HII 101 306 3.8E-46 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 PIRSF PIRSF037748 1 314 3.9E-114 T 11-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 Gene3D G3DSA:3.30.420.10 98 317 3.8E-75 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_016745 40a8091e69a26e39e083ae5fc486a2ac 319 SUPERFAMILY SSF53098 99 312 2.43E-45 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 63 361 1.6E-88 T 11-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 SUPERFAMILY SSF55604 437 510 1.2E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 Pfam PF00367 phosphotransferase system, EIIB 439 470 5.3E-14 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 414 495 1.2E-18 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 449 466 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 Pfam PF02378 Phosphotransferase system, EIIC 12 350 3.6E-91 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_019365 1bc6b63b8be34edec625339809fc441a 511 Gene3D G3DSA:3.30.1360.60 431 511 5.1E-28 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 PRINTS PR01469 Bacterial carbamate kinase signature 206 221 2.0E-7 T 11-10-2018 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 PRINTS PR01469 Bacterial carbamate kinase signature 31 50 2.0E-7 T 11-10-2018 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 PRINTS PR01469 Bacterial carbamate kinase signature 157 172 2.0E-7 T 11-10-2018 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 Gene3D G3DSA:3.40.1160.10 1 237 8.9E-68 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 Pfam PF00696 Amino acid kinase family 3 233 4.6E-37 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 231 2.2E-75 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 242 37.467 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 SUPERFAMILY SSF53633 1 251 1.44E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_006030 24d1d9bc6b41a3d10e2d73a808ab171a 257 PIRSF PIRSF000728 1 252 2.4E-79 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 Pfam PF09383 NIL domain 264 334 3.1E-18 T 11-10-2018 IPR018449 NIL domain ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 SUPERFAMILY SSF55021 262 336 6.41E-18 T 11-10-2018 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 Gene3D G3DSA:3.30.70.260 233 338 5.2E-25 T 11-10-2018 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 Pfam PF00005 ABC transporter 21 169 2.6E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 SMART SM00382 30 217 6.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 SUPERFAMILY SSF52540 1 240 7.56E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 Gene3D G3DSA:3.40.50.300 1 232 2.3E-74 T 11-10-2018 ABE28_019170 4b7e6003ddf5a752af975e97ddb8b1ed 340 SMART SM00930 261 336 1.7E-18 T 11-10-2018 IPR018449 NIL domain ABE28_013110 9bfe318e0a19b5a0ebe1ce509b1b7c18 320 Gene3D G3DSA:2.130.10.10 133 319 5.0E-15 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABE28_013110 9bfe318e0a19b5a0ebe1ce509b1b7c18 320 SUPERFAMILY SSF51004 33 315 2.38E-23 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 9 365 6.0E-61 T 11-10-2018 IPR005674 CocE/Serine esterase GO:0016787 ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 329 551 1.4E-25 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 Gene3D G3DSA:3.40.50.1820 1 255 1.2E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 Gene3D G3DSA:3.40.50.1820 256 353 4.2E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 SUPERFAMILY SSF53474 2 352 5.64E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 SMART SM00939 316 552 7.6E-40 T 11-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 SUPERFAMILY SSF49785 344 557 2.55E-34 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 Gene3D G3DSA:2.60.120.260 357 566 1.8E-37 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_008510 70e05525ba437eec8dbfb976bc282f46 576 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 13 292 2.4E-45 T 11-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 11-10-2018 IPR018215 ClpP, Ser active site ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 43.689 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 6.8E-107 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 Gene3D G3DSA:3.90.226.10 1 195 1.0E-83 T 11-10-2018 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 4.0E-53 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 11-10-2018 IPR033135 ClpP, histidine active site ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 SUPERFAMILY SSF52096 3 192 1.34E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_022170 43abbe78c3e9e940f847a03040c3e19d 202 Pfam PF00574 Clp protease 12 192 1.2E-86 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_004770 e3018e937258e53431762b32bdefccc3 210 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 12 197 32.44 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_004770 e3018e937258e53431762b32bdefccc3 210 Gene3D G3DSA:3.10.300.10 5 206 8.7E-64 T 11-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_004770 e3018e937258e53431762b32bdefccc3 210 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 10 197 6.6E-73 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_004770 e3018e937258e53431762b32bdefccc3 210 SUPERFAMILY SSF50486 8 202 1.02E-63 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 ABE28_004770 e3018e937258e53431762b32bdefccc3 210 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 13 194 1.3E-58 T 11-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Gene3D G3DSA:3.40.50.300 91 286 8.2E-130 T 11-10-2018 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 SUPERFAMILY SSF47446 328 430 6.87E-38 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Gene3D G3DSA:1.20.120.140 6 307 8.2E-130 T 11-10-2018 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 SMART SM00962 101 297 8.7E-121 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 8.3E-23 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.7E-79 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 446 35.486 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 SMART SM00963 2 87 6.7E-34 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Gene3D G3DSA:1.10.260.30 328 444 5.9E-43 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 SMART SM00382 100 275 8.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 SUPERFAMILY SSF52540 43 355 9.86E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 Pfam PF02978 Signal peptide binding domain 328 427 1.2E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 4.6E-191 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 ABE28_007825 0d2c998eb0ed93e1e2e6a5db4021b65b 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_021340 3bab8cde7973980943d018e65b9b9d18 389 SUPERFAMILY SSF53383 6 386 2.39E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021340 3bab8cde7973980943d018e65b9b9d18 389 Pfam PF00155 Aminotransferase class I and II 32 379 1.1E-71 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_021340 3bab8cde7973980943d018e65b9b9d18 389 Gene3D G3DSA:3.40.640.10 62 283 1.4E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_021340 3bab8cde7973980943d018e65b9b9d18 389 Gene3D G3DSA:3.90.1150.10 31 379 1.4E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_021340 3bab8cde7973980943d018e65b9b9d18 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 233 246 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABE28_016765 32f365fb931b710227a27bd6118bc85f 69 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 5.4E-33 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 ABE28_016765 32f365fb931b710227a27bd6118bc85f 69 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 22.196 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 ABE28_016765 32f365fb931b710227a27bd6118bc85f 69 Pfam PF14098 Small, acid-soluble spore protein I 3 67 3.9E-31 T 11-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 ABE28_015870 f31d07bbe6569f3a5d5c98913cd1efd6 374 SUPERFAMILY SSF53756 65 370 2.77E-37 T 11-10-2018 ABE28_015870 f31d07bbe6569f3a5d5c98913cd1efd6 374 Gene3D G3DSA:3.40.50.2000 191 354 2.7E-22 T 11-10-2018 ABE28_015870 f31d07bbe6569f3a5d5c98913cd1efd6 374 Gene3D G3DSA:3.40.50.2000 4 190 4.1E-6 T 11-10-2018 ABE28_015870 f31d07bbe6569f3a5d5c98913cd1efd6 374 Pfam PF00534 Glycosyl transferases group 1 195 338 2.1E-15 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 PIRSF PIRSF039088 1 501 4.0E-243 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Gene3D G3DSA:1.20.150.20 372 499 4.0E-50 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 485 2.7E-45 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 25 92 6.6E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 50.999 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 9.2E-254 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 SUPERFAMILY SSF47917 372 500 2.22E-46 T 11-10-2018 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Gene3D G3DSA:2.40.30.20 1 93 3.0E-36 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 SUPERFAMILY SSF50615 10 94 6.28E-30 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Gene3D G3DSA:3.40.50.300 94 371 1.8E-125 T 11-10-2018 ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 SUPERFAMILY SSF52540 95 370 5.58E-97 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022840 7adc4ae22b84fdcbd66359cbb417f21a 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.9E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 Gene3D G3DSA:3.30.450.40 128 305 2.0E-23 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 SMART SM00065 139 299 0.0036 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 SUPERFAMILY SSF55781 121 300 7.41E-22 T 11-10-2018 ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 Pfam PF13185 GAF domain 139 289 1.2E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 Gene3D G3DSA:1.10.10.2840 563 691 2.4E-19 T 11-10-2018 ABE28_019315 f782bed10762784a9e2a0b46eb30d821 692 Pfam PF13556 PucR C-terminal helix-turn-helix domain 633 687 2.2E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_022000 6bd0c6d4e0f0a73acaef2d3bb2c7cb7b 173 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 160 36.191 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_022000 6bd0c6d4e0f0a73acaef2d3bb2c7cb7b 173 Gene3D G3DSA:3.30.1060.10 1 160 8.4E-64 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_022000 6bd0c6d4e0f0a73acaef2d3bb2c7cb7b 173 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 3 153 1.1E-60 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_022000 6bd0c6d4e0f0a73acaef2d3bb2c7cb7b 173 Pfam PF01625 Peptide methionine sulfoxide reductase 3 154 2.4E-59 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_022000 6bd0c6d4e0f0a73acaef2d3bb2c7cb7b 173 SUPERFAMILY SSF55068 1 165 4.19E-69 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_003600 351666819fbe280dbbb0add86278013b 265 Gene3D G3DSA:1.10.10.2800 1 106 1.6E-38 T 11-10-2018 ABE28_003600 351666819fbe280dbbb0add86278013b 265 Pfam PF02631 RecX family 84 204 1.0E-26 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ABE28_003600 351666819fbe280dbbb0add86278013b 265 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 17.132 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 ABE28_003600 351666819fbe280dbbb0add86278013b 265 Gene3D G3DSA:1.10.10.10 108 152 4.5E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003600 351666819fbe280dbbb0add86278013b 265 Gene3D G3DSA:1.10.10.10 155 214 4.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003600 351666819fbe280dbbb0add86278013b 265 Gene3D G3DSA:1.10.10.10 215 265 1.1E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 SUPERFAMILY SSF53383 28 391 3.82E-118 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 Gene3D G3DSA:3.90.1150.10 261 391 2.6E-49 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 Gene3D G3DSA:3.40.640.10 4 257 1.1E-91 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 TIGRFAM TIGR01328 met_gam_lyase: methionine gamma-lyase 6 390 1.6E-182 T 11-10-2018 IPR006237 L-methionine gamma-lyase GO:0018826 KEGG: 00270+4.4.1.11|KEGG: 00450+4.4.1.11|KEGG: 00920+4.4.1.2|MetaCyc: PWY-7793 ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 201 215 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 PIRSF PIRSF001434 1 391 2.8E-142 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_002570 a1b67de057c88843bbbbf61b0638acec 391 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 391 9.6E-141 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 343 47.578 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 141 157 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 Gene3D G3DSA:3.20.20.210 1 347 6.0E-147 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 SUPERFAMILY SSF51726 6 344 1.06E-104 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 341 1.5E-127 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABE28_005785 bfed53de7f586b19f80dedd57d1c55ba 347 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 342 3.9E-123 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 ABE28_008430 648e982a7545508aefb5836c462e4dc6 453 Gene3D G3DSA:1.20.1250.20 12 217 2.2E-51 T 11-10-2018 ABE28_008430 648e982a7545508aefb5836c462e4dc6 453 Gene3D G3DSA:1.20.1250.20 245 440 7.7E-33 T 11-10-2018 ABE28_008430 648e982a7545508aefb5836c462e4dc6 453 PIRSF PIRSF002808 4 453 3.5E-44 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 ABE28_008430 648e982a7545508aefb5836c462e4dc6 453 SUPERFAMILY SSF103473 8 439 4.19E-85 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_008430 648e982a7545508aefb5836c462e4dc6 453 Pfam PF07690 Major Facilitator Superfamily 26 402 3.9E-58 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001220 d440b5e1c175cc045145832a37c64f80 159 SUPERFAMILY SSF46785 15 151 3.27E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001220 d440b5e1c175cc045145832a37c64f80 159 Pfam PF01047 MarR family 40 97 3.8E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001220 d440b5e1c175cc045145832a37c64f80 159 Gene3D G3DSA:1.10.10.10 3 153 8.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001220 d440b5e1c175cc045145832a37c64f80 159 SMART SM00347 32 132 1.5E-18 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_023460 7d67f2e5e79d00ba2ea754ef2122d340 325 Gene3D G3DSA:2.40.30.170 124 203 1.4E-14 T 11-10-2018 ABE28_023460 7d67f2e5e79d00ba2ea754ef2122d340 325 Gene3D G3DSA:2.40.420.20 204 272 6.9E-12 T 11-10-2018 ABE28_023460 7d67f2e5e79d00ba2ea754ef2122d340 325 SUPERFAMILY SSF51230 57 126 5.85E-6 T 11-10-2018 IPR011053 Single hybrid motif ABE28_023460 7d67f2e5e79d00ba2ea754ef2122d340 325 Gene3D G3DSA:2.40.50.100 59 123 2.1E-11 T 11-10-2018 ABE28_023460 7d67f2e5e79d00ba2ea754ef2122d340 325 Pfam PF13437 HlyD family secretion protein 97 193 6.7E-17 T 11-10-2018 ABE28_020975 628c711ddb5bd23c2eefa789cb4e695d 395 Pfam PF00155 Aminotransferase class I and II 73 388 6.8E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_020975 628c711ddb5bd23c2eefa789cb4e695d 395 SUPERFAMILY SSF53383 28 392 6.12E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020975 628c711ddb5bd23c2eefa789cb4e695d 395 Gene3D G3DSA:3.40.640.10 66 287 1.0E-115 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_020975 628c711ddb5bd23c2eefa789cb4e695d 395 Gene3D G3DSA:3.90.1150.10 30 392 1.0E-115 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 63.91 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 Gene3D G3DSA:3.90.1150.10 16 370 4.0E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 PIRSF PIRSF000521 106 145 0.0072 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 PIRSF PIRSF000521 12 113 1.1E-4 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 PIRSF PIRSF000521 150 379 2.4E-39 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 3 377 1.8E-145 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 SUPERFAMILY SSF53383 3 377 6.25E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 Pfam PF00202 Aminotransferase class-III 17 376 5.9E-116 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 204 241 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_006035 8efc42b8c02977f3c20a9a3d3d4d3d47 383 Gene3D G3DSA:3.40.640.10 47 286 4.0E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_003885 5b2b452dc55b224b7c94ac77e1edd7db 161 Pfam PF03061 Thioesterase superfamily 57 141 3.6E-6 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_003885 5b2b452dc55b224b7c94ac77e1edd7db 161 Gene3D G3DSA:3.10.129.10 4 159 4.5E-37 T 11-10-2018 ABE28_003885 5b2b452dc55b224b7c94ac77e1edd7db 161 SUPERFAMILY SSF54637 4 151 1.19E-26 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_001620 f213cf48b6204f310dd47137a7381b61 309 Gene3D G3DSA:3.90.1200.10 100 294 2.2E-25 T 11-10-2018 ABE28_001620 f213cf48b6204f310dd47137a7381b61 309 SUPERFAMILY SSF56112 14 260 2.04E-31 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_001620 f213cf48b6204f310dd47137a7381b61 309 Pfam PF01636 Phosphotransferase enzyme family 21 241 9.4E-20 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_010010 fd96cdab570ecb462c64e982cff91dd6 246 Gene3D G3DSA:3.20.20.370 11 237 2.6E-67 T 11-10-2018 ABE28_010010 fd96cdab570ecb462c64e982cff91dd6 246 Pfam PF01522 Polysaccharide deacetylase 37 159 1.9E-32 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_010010 fd96cdab570ecb462c64e982cff91dd6 246 SUPERFAMILY SSF88713 5 229 1.41E-62 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PRINTS PR00116 Arginase signature 257 271 4.9E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PRINTS PR00116 Arginase signature 173 191 4.9E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PRINTS PR00116 Arginase signature 96 111 4.9E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PRINTS PR00116 Arginase signature 222 251 4.9E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PRINTS PR00116 Arginase signature 119 146 4.9E-43 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 Pfam PF00491 Arginase family 5 295 2.4E-80 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 TIGRFAM TIGR01229 rocF_arginase: arginase 7 300 4.1E-106 T 11-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 ProSitePatterns PS01053 Arginase family signature. 225 246 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 Gene3D G3DSA:3.40.800.10 3 300 2.8E-115 T 11-10-2018 ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 SUPERFAMILY SSF52768 5 297 9.18E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_000865 585ebb58d43cc8a56921bb01b7efe164 300 PIRSF PIRSF036979 2 296 1.4E-38 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 SUPERFAMILY SSF55920 137 364 7.85E-79 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 SUPERFAMILY SSF53092 1 136 1.5E-33 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 Gene3D G3DSA:3.90.230.10 139 364 1.5E-80 T 11-10-2018 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 Gene3D G3DSA:3.40.350.10 1 138 1.0E-39 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 316 328 2.0E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 196 209 2.0E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 PRINTS PR00599 Methionine aminopeptidase-1 signature 218 234 2.0E-7 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 294 306 - T 11-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 Pfam PF00557 Metallopeptidase family M24 146 348 3.3E-63 T 11-10-2018 IPR000994 Peptidase M24 ABE28_017070 fdc1142a500bc7cea4d24834750e3152 365 Pfam PF01321 Creatinase/Prolidase N-terminal domain 4 138 7.0E-28 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ABE28_015345 cd13bc3274f090167069186519f32db3 372 Gene3D G3DSA:3.30.70.120 132 241 1.4E-43 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_015345 cd13bc3274f090167069186519f32db3 372 SUPERFAMILY SSF102705 5 371 2.09E-130 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily ABE28_015345 cd13bc3274f090167069186519f32db3 372 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 8 349 8.0E-80 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABE28_015345 cd13bc3274f090167069186519f32db3 372 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 4 368 3.0E-92 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 ABE28_015345 cd13bc3274f090167069186519f32db3 372 Gene3D G3DSA:3.40.1390.30 1 125 3.8E-39 T 11-10-2018 ABE28_015345 cd13bc3274f090167069186519f32db3 372 PIRSF PIRSF037489 2 372 2.8E-156 T 11-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 SUPERFAMILY SSF54373 225 310 4.45E-16 T 11-10-2018 ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 Gene3D G3DSA:3.50.50.60 5 351 3.7E-111 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 SUPERFAMILY SSF51905 4 356 1.49E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 7 355 2.4E-104 T 11-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 Gene3D G3DSA:3.30.9.10 91 310 3.7E-111 T 11-10-2018 ABE28_010670 07f15fa0ad6a587070742be2b2b7e39c 373 Pfam PF01266 FAD dependent oxidoreductase 5 350 1.5E-72 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 288 1.7E-63 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 SUPERFAMILY SSF51735 102 289 6.25E-61 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 Gene3D G3DSA:3.40.50.720 6 312 1.2E-123 T 11-10-2018 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 319 9.8E-30 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 SUPERFAMILY SSF52283 2 136 1.53E-35 T 11-10-2018 ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site ABE28_006400 9791ebdcb4b732d3e100a36cc5a09e44 324 Gene3D G3DSA:3.40.50.720 100 287 1.2E-123 T 11-10-2018 ABE28_004340 2d91c15b6c9a125d59cea75351b4bd1a 124 SUPERFAMILY SSF56059 3 104 7.42E-11 T 11-10-2018 ABE28_004340 2d91c15b6c9a125d59cea75351b4bd1a 124 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 1 103 8.2E-16 T 11-10-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain ABE28_004340 2d91c15b6c9a125d59cea75351b4bd1a 124 Gene3D G3DSA:3.30.1490.330 19 94 7.0E-11 T 11-10-2018 ABE28_004685 184d9132acfa37972fd5bf6fbdad37cc 408 Pfam PF07690 Major Facilitator Superfamily 41 361 1.4E-20 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_004685 184d9132acfa37972fd5bf6fbdad37cc 408 Gene3D G3DSA:1.20.1250.20 6 403 5.9E-40 T 11-10-2018 ABE28_004685 184d9132acfa37972fd5bf6fbdad37cc 408 SUPERFAMILY SSF103473 20 400 3.53E-49 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_015040 9a2b4c7ea493423f6fe962376c2d4d89 293 Gene3D G3DSA:3.40.1090.10 104 291 6.7E-23 T 11-10-2018 ABE28_015040 9a2b4c7ea493423f6fe962376c2d4d89 293 SUPERFAMILY SSF52151 6 291 8.11E-43 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_015040 9a2b4c7ea493423f6fe962376c2d4d89 293 Pfam PF01734 Patatin-like phospholipase 6 194 1.0E-31 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABE28_015040 9a2b4c7ea493423f6fe962376c2d4d89 293 Gene3D G3DSA:3.40.1090.20 1 89 4.6E-20 T 11-10-2018 ABE28_023905 dd0d9a4f5e95e639081e9468ceffba46 368 Gene3D G3DSA:1.10.10.800 200 294 1.5E-109 T 11-10-2018 ABE28_023905 dd0d9a4f5e95e639081e9468ceffba46 368 Gene3D G3DSA:3.40.50.1820 65 349 1.5E-109 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_023905 dd0d9a4f5e95e639081e9468ceffba46 368 SUPERFAMILY SSF53474 51 366 1.59E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_023905 dd0d9a4f5e95e639081e9468ceffba46 368 Pfam PF01738 Dienelactone hydrolase family 85 204 9.3E-8 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 Gene3D G3DSA:3.40.50.1360 1 240 9.1E-101 T 11-10-2018 ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 SUPERFAMILY SSF100950 1 239 5.58E-92 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 238 1.7E-97 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 43.603 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 ABE28_001110 199b802f6eddd133f6d189b9a296b528 244 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 24 229 2.5E-21 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 ABE28_022290 8a6f4d8be7d8966b1d1667312a18eb00 123 SUPERFAMILY SSF159888 1 123 6.41E-40 T 11-10-2018 ABE28_022290 8a6f4d8be7d8966b1d1667312a18eb00 123 Pfam PF08818 Domain of unknown function (DU1801) 17 109 4.6E-11 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ABE28_022290 8a6f4d8be7d8966b1d1667312a18eb00 123 Gene3D G3DSA:1.10.10.810 1 115 8.0E-53 T 11-10-2018 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 944 22.48 T 11-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 941 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Gene3D G3DSA:3.40.50.12470 556 816 1.1E-149 T 11-10-2018 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 799 941 3.5E-39 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 PIRSF PIRSF000157 2 944 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Gene3D G3DSA:3.40.50.11610 734 940 1.1E-149 T 11-10-2018 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Gene3D G3DSA:3.40.50.970 156 538 6.2E-130 T 11-10-2018 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 SUPERFAMILY SSF52518 581 797 9.62E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Pfam PF00676 Dehydrogenase E1 component 223 531 6.7E-74 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 SUPERFAMILY SSF52518 144 529 2.89E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 SMART SM00861 598 794 1.3E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_012975 3ab04cad68658b5ad4e49e4d517d63ce 950 Pfam PF02779 Transketolase, pyrimidine binding domain 597 794 1.1E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_011360 4a0b3410da92f0e7ffc68556408664ad 247 Pfam PF00877 NlpC/P60 family 137 244 5.1E-28 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_011360 4a0b3410da92f0e7ffc68556408664ad 247 Gene3D G3DSA:2.30.30.40 54 121 1.2E-20 T 11-10-2018 ABE28_011360 4a0b3410da92f0e7ffc68556408664ad 247 Gene3D G3DSA:3.90.1720.10 123 247 3.4E-42 T 11-10-2018 ABE28_011360 4a0b3410da92f0e7ffc68556408664ad 247 SUPERFAMILY SSF54001 123 246 2.35E-41 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_011360 4a0b3410da92f0e7ffc68556408664ad 247 Gene3D G3DSA:2.30.30.40 1 53 2.3E-16 T 11-10-2018 ABE28_011430 5d701828d0509b858006a371189375c3 166 PIRSF PIRSF021700 3 166 3.6E-59 T 11-10-2018 IPR009725 Predicted 3-demethylubiquinone-9 3-methyltransferase ABE28_011430 5d701828d0509b858006a371189375c3 166 Gene3D G3DSA:3.10.180.70 3 166 5.2E-65 T 11-10-2018 ABE28_011430 5d701828d0509b858006a371189375c3 166 SUPERFAMILY SSF54593 7 164 5.38E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011430 5d701828d0509b858006a371189375c3 166 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 7 126 2.1E-47 T 11-10-2018 IPR028973 PhnB-like ABE28_012905 a3676a5c0f0dc695ebe129fd8ab25821 510 Pfam PF01145 SPFH domain / Band 7 family 30 220 5.6E-25 T 11-10-2018 IPR001107 Band 7 domain ABE28_012905 a3676a5c0f0dc695ebe129fd8ab25821 510 SUPERFAMILY SSF117892 68 210 2.09E-34 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily ABE28_012905 a3676a5c0f0dc695ebe129fd8ab25821 510 Gene3D G3DSA:3.30.479.30 77 193 1.2E-37 T 11-10-2018 ABE28_012905 a3676a5c0f0dc695ebe129fd8ab25821 510 SMART SM00244 119 301 3.8E-10 T 11-10-2018 IPR001107 Band 7 domain ABE28_012905 a3676a5c0f0dc695ebe129fd8ab25821 510 Pfam PF15975 Flotillin 368 459 1.4E-13 T 11-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 ABE28_002285 13315968649f96da9494947a7adbd59d 500 Pfam PF00005 ABC transporter 20 174 1.6E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002285 13315968649f96da9494947a7adbd59d 500 ProSitePatterns PS00211 ABC transporters family signature. 401 415 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002285 13315968649f96da9494947a7adbd59d 500 Pfam PF00005 ABC transporter 274 428 8.0E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002285 13315968649f96da9494947a7adbd59d 500 SMART SM00382 282 476 3.8E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002285 13315968649f96da9494947a7adbd59d 500 SMART SM00382 29 222 1.7E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002285 13315968649f96da9494947a7adbd59d 500 SUPERFAMILY SSF52540 5 234 1.02E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002285 13315968649f96da9494947a7adbd59d 500 Gene3D G3DSA:3.40.50.300 266 496 7.8E-43 T 11-10-2018 ABE28_002285 13315968649f96da9494947a7adbd59d 500 SUPERFAMILY SSF52540 254 486 2.13E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002285 13315968649f96da9494947a7adbd59d 500 Gene3D G3DSA:3.40.50.300 3 244 3.8E-50 T 11-10-2018 ABE28_015760 24ba7877d3035f27279efd2614cb6d80 152 SUPERFAMILY SSF50346 3 66 6.28E-9 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ABE28_015760 24ba7877d3035f27279efd2614cb6d80 152 Pfam PF05239 PRC-barrel domain 5 67 4.3E-9 T 11-10-2018 IPR027275 PRC-barrel domain ABE28_015760 24ba7877d3035f27279efd2614cb6d80 152 Pfam PF05239 PRC-barrel domain 86 146 2.0E-4 T 11-10-2018 IPR027275 PRC-barrel domain ABE28_015760 24ba7877d3035f27279efd2614cb6d80 152 Gene3D G3DSA:2.30.30.240 1 77 8.6E-6 T 11-10-2018 ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 21 408 1.8E-117 T 11-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 Gene3D G3DSA:3.40.630.10 27 419 1.0E-143 T 11-10-2018 ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 SUPERFAMILY SSF55031 203 307 1.79E-14 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 SUPERFAMILY SSF53187 6 419 1.94E-62 T 11-10-2018 ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 Gene3D G3DSA:3.30.70.360 204 330 1.0E-143 T 11-10-2018 ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 Pfam PF07687 Peptidase dimerisation domain 202 312 5.0E-17 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_018440 423a8b79ac1f4b5ea7b0ea0f06759d2d 436 Pfam PF01546 Peptidase family M20/M25/M40 97 414 1.9E-36 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Pfam PF03717 Penicillin-binding Protein dimerisation domain 157 319 6.6E-36 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Gene3D G3DSA:3.90.1310.10 157 332 5.7E-51 T 11-10-2018 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Gene3D G3DSA:3.30.1390.30 177 249 5.7E-51 T 11-10-2018 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 SUPERFAMILY SSF56601 338 668 2.73E-75 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Gene3D G3DSA:3.10.450.100 25 144 2.5E-19 T 11-10-2018 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 655 3.2E-68 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 SUPERFAMILY SSF56519 151 337 6.8E-41 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 26 148 1.4E-26 T 11-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 SUPERFAMILY SSF54427 28 146 3.86E-28 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_022610 fa7102fd9e46a38a24ba093ec4d03d6f 668 Gene3D G3DSA:3.40.710.10 337 668 7.3E-84 T 11-10-2018 ABE28_020730 8e0b0db222bd0e4a7e93a20021ebe52c 256 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_020730 8e0b0db222bd0e4a7e93a20021ebe52c 256 Pfam PF00005 ABC transporter 23 163 2.0E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_020730 8e0b0db222bd0e4a7e93a20021ebe52c 256 SUPERFAMILY SSF52540 4 220 1.54E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020730 8e0b0db222bd0e4a7e93a20021ebe52c 256 Gene3D G3DSA:3.40.50.300 2 247 2.9E-60 T 11-10-2018 ABE28_020730 8e0b0db222bd0e4a7e93a20021ebe52c 256 SMART SM00382 32 212 9.1E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 SUPERFAMILY SSF56176 350 430 1.55E-18 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Pfam PF01595 Domain of unknown function DUF21 9 202 2.8E-48 T 11-10-2018 IPR002550 CNNM, transmembrane domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 SMART SM01091 355 432 2.6E-24 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 SUPERFAMILY SSF54631 205 342 1.89E-30 T 11-10-2018 ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 SMART SM00116 291 339 2.8 T 11-10-2018 IPR000644 CBS domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 SMART SM00116 226 275 0.019 T 11-10-2018 IPR000644 CBS domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Gene3D G3DSA:3.30.465.10 350 430 1.8E-18 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Pfam PF03471 Transporter associated domain 356 431 1.9E-19 T 11-10-2018 IPR005170 Transporter-associated domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Pfam PF00571 CBS domain 290 339 3.2E-5 T 11-10-2018 IPR000644 CBS domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Pfam PF00571 CBS domain 223 270 3.6E-5 T 11-10-2018 IPR000644 CBS domain ABE28_001245 61af7ace8fc3aeef4cf5227196ec9724 432 Gene3D G3DSA:3.10.580.10 198 349 4.6E-48 T 11-10-2018 ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 Gene3D G3DSA:3.40.50.10740 1 158 1.6E-57 T 11-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 SUPERFAMILY SSF52317 2 164 2.33E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 SUPERFAMILY SSF141986 165 314 9.55E-36 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 PIRSF PIRSF028757 1 324 1.8E-81 T 11-10-2018 IPR003507 Peptidase family S66 ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 Pfam PF02016 LD-carboxypeptidase 12 310 2.5E-74 T 11-10-2018 IPR003507 Peptidase family S66 ABE28_013295 56dc78a4d80f9e3b3a63a3911e652391 324 Gene3D G3DSA:3.50.30.60 159 322 7.4E-52 T 11-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 Pfam PF04542 Sigma-70 region 2 8 74 4.2E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 Gene3D G3DSA:1.10.10.10 89 168 1.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 SUPERFAMILY SSF88946 4 79 3.92E-22 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 Pfam PF08281 Sigma-70, region 4 109 159 7.7E-13 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 SUPERFAMILY SSF88659 90 167 3.55E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 Gene3D G3DSA:1.10.1740.10 1 71 3.4E-24 T 11-10-2018 ABE28_014470 7f95a78b4dd08d8b090b18babd3f3147 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 164 1.9E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 Gene3D G3DSA:3.30.1490.20 120 188 1.0E-22 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 Gene3D G3DSA:3.40.50.20 3 119 1.3E-45 T 11-10-2018 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 14 363 42.155 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 SUPERFAMILY SSF51246 312 375 1.1E-14 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 SUPERFAMILY SSF56059 110 308 4.77E-60 T 11-10-2018 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 SUPERFAMILY SSF52440 9 96 1.31E-24 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 14 365 7.2E-125 T 11-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 Pfam PF02222 ATP-grasp domain 120 288 1.8E-57 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABE28_001890 1549753f35e3063e750d719ee05aac2f 386 Gene3D G3DSA:3.30.470.20 189 378 5.8E-76 T 11-10-2018 ABE28_004040 0d1f8d5e5ee2370de06b31ecb32e045b 141 SUPERFAMILY SSF46785 23 137 1.37E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004040 0d1f8d5e5ee2370de06b31ecb32e045b 141 Gene3D G3DSA:1.10.10.10 3 136 5.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004040 0d1f8d5e5ee2370de06b31ecb32e045b 141 Pfam PF01047 MarR family 27 85 9.9E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_004040 0d1f8d5e5ee2370de06b31ecb32e045b 141 SMART SM00347 20 121 1.4E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 85 103 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 SUPERFAMILY SSF53901 272 392 1.92E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 Pfam PF00108 Thiolase, N-terminal domain 5 263 9.1E-90 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 PIRSF PIRSF000429 2 394 3.6E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 Pfam PF02803 Thiolase, C-terminal domain 271 392 1.0E-48 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 ProSitePatterns PS00099 Thiolases active site. 375 388 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 Gene3D G3DSA:3.40.47.10 7 277 7.0E-161 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 Gene3D G3DSA:3.40.47.10 127 391 7.0E-161 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 ProSitePatterns PS00737 Thiolases signature 2. 340 356 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 SUPERFAMILY SSF53901 5 270 1.87E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010100 10c45990c4c76c5f61e1dc0ffde1472d 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 392 3.9E-149 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Pfam PF14804 Jag N-terminus 7 55 1.4E-19 T 11-10-2018 IPR032782 Jag, N-terminal ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 SUPERFAMILY SSF82708 146 204 3.14E-10 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Gene3D G3DSA:3.30.1370.50 141 206 3.0E-26 T 11-10-2018 IPR036867 R3H domain superfamily GO:0003676 ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Gene3D G3DSA:3.30.300.20 59 140 1.0E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Pfam PF13083 KH domain 67 127 1.8E-14 T 11-10-2018 ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Pfam PF01424 R3H domain 144 204 2.7E-16 T 11-10-2018 IPR001374 R3H domain GO:0003676 ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 SMART SM01245 5 57 4.6E-22 T 11-10-2018 IPR032782 Jag, N-terminal ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 Gene3D G3DSA:3.30.30.80 1 56 5.4E-18 T 11-10-2018 IPR038247 Jag, N-terminal domain superfamily ABE28_023790 66b8e66d7aeb099d5e7c0e3179fe1257 206 SMART SM00393 126 205 7.5E-22 T 11-10-2018 IPR001374 R3H domain GO:0003676 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 978 994 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1001 1009 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 699 709 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 868 877 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 905 924 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 833 840 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 934 943 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 947 958 2.8E-30 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Gene3D G3DSA:3.40.50.80 894 1054 5.1E-58 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Pfam PF00175 Oxidoreductase NAD-binding domain 906 1016 1.0E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 SUPERFAMILY SSF52343 893 1052 9.82E-48 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Pfam PF00667 FAD binding domain 663 873 7.8E-38 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Gene3D G3DSA:1.10.630.10 4 471 8.7E-168 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Pfam PF00258 Flavodoxin 489 621 1.0E-25 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 SUPERFAMILY SSF52218 484 638 2.07E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Gene3D G3DSA:3.40.50.360 484 635 3.5E-45 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Gene3D G3DSA:1.20.990.10 709 831 1.9E-69 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Gene3D G3DSA:2.40.30.10 671 883 1.9E-69 T 11-10-2018 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 SUPERFAMILY SSF48264 6 455 2.49E-107 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PIRSF PIRSF000209 1 1055 0.0 T 11-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 Pfam PF00067 Cytochrome P450 16 447 9.5E-81 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00369 Flavodoxin signature 488 501 1.7E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00369 Flavodoxin signature 591 610 1.7E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00369 Flavodoxin signature 566 576 1.7E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 PRINTS PR00369 Flavodoxin signature 534 545 1.7E-11 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_019065 ba7a72e0d44554e5ef447fe2db07c906 1055 SUPERFAMILY SSF63380 661 889 1.53E-61 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_021090 6c68f92cd379df1b7e9e57f24ffbcae8 362 Gene3D G3DSA:3.20.20.300 1 351 6.5E-104 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 ABE28_021090 6c68f92cd379df1b7e9e57f24ffbcae8 362 SUPERFAMILY SSF51445 2 334 2.95E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_021090 6c68f92cd379df1b7e9e57f24ffbcae8 362 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 6 326 2.4E-86 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.7E-14 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.365 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 35 75 7.0E-12 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 75 2.2E-33 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 SUPERFAMILY SSF47336 3 76 1.05E-21 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site ABE28_007795 b6eeba69ab2d3f6793dac39cac5dd6a3 77 Gene3D G3DSA:1.10.1200.10 1 75 3.0E-27 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_000150 f0693c8b9a743203cae33d8c95310cea 86 SUPERFAMILY SSF82771 4 76 9.29E-15 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_000150 f0693c8b9a743203cae33d8c95310cea 86 Gene3D G3DSA:3.40.1440.10 1 86 9.1E-34 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_000150 f0693c8b9a743203cae33d8c95310cea 86 Pfam PF01541 GIY-YIG catalytic domain 5 76 4.2E-19 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_019620 ee110725978d8b310730085bd98d447d 294 Gene3D G3DSA:3.40.710.10 21 289 7.8E-80 T 11-10-2018 ABE28_019620 ee110725978d8b310730085bd98d447d 294 Pfam PF13354 Beta-lactamase enzyme family 57 262 2.6E-38 T 11-10-2018 ABE28_019620 ee110725978d8b310730085bd98d447d 294 ProSitePatterns PS00146 Beta-lactamase class-A active site. 69 84 - T 11-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 67 84 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 222 237 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 205 220 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 143 167 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 169 194 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 107 132 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 PRINTS PR00118 Beta-lactamase class A signature 36 60 9.6E-64 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 ABE28_019620 ee110725978d8b310730085bd98d447d 294 SUPERFAMILY SSF56601 36 290 4.35E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Gene3D G3DSA:3.40.50.970 1 177 1.8E-54 T 11-10-2018 ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 SUPERFAMILY SSF52518 3 171 2.41E-41 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Gene3D G3DSA:3.40.50.1220 178 333 4.0E-40 T 11-10-2018 ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 SUPERFAMILY SSF52518 358 557 4.95E-59 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 SUPERFAMILY SSF52467 182 350 6.1E-38 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 166 1.2E-38 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 1.6E-21 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 527 5.0E-37 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_004195 4c6cdb7339c51b84e62a6a9ed72bd7ef 574 Gene3D G3DSA:3.40.50.970 350 574 8.2E-66 T 11-10-2018 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 3.5E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 Gene3D G3DSA:2.40.50.140 1 66 1.2E-30 T 11-10-2018 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 SMART SM00357 3 66 1.3E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 PIRSF PIRSF002599 1 66 1.0E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 SUPERFAMILY SSF50249 1 64 4.93E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 39 57 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 24 33 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 PRINTS PR00050 Cold shock protein signature 4 19 1.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_013965 1ed152f706539f80e87b16e12c35e631 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_002775 88438ff30c994cd39dc5a56dd62d532f 294 Gene3D G3DSA:1.10.340.30 116 235 8.4E-53 T 11-10-2018 ABE28_002775 88438ff30c994cd39dc5a56dd62d532f 294 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 124 273 5.8E-17 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_002775 88438ff30c994cd39dc5a56dd62d532f 294 SMART SM00478 128 288 1.4E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 ABE28_002775 88438ff30c994cd39dc5a56dd62d532f 294 SUPERFAMILY SSF48150 108 287 2.79E-38 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 ABE28_002775 88438ff30c994cd39dc5a56dd62d532f 294 Gene3D G3DSA:1.10.1670.40 236 285 8.4E-53 T 11-10-2018 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 Pfam PF00480 ROK family 84 392 1.8E-55 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 Gene3D G3DSA:3.30.420.40 88 386 1.4E-82 T 11-10-2018 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 Gene3D G3DSA:3.30.420.40 205 377 1.4E-82 T 11-10-2018 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 SUPERFAMILY SSF46785 9 74 1.65E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 Pfam PF13412 Winged helix-turn-helix DNA-binding 13 55 2.2E-5 T 11-10-2018 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 SUPERFAMILY SSF53067 82 395 8.32E-62 T 11-10-2018 ABE28_002845 45ca08f129919cd85d75b0ea7d7aac6f 406 Gene3D G3DSA:1.10.10.10 11 77 8.2E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012460 d64951991ea6e20cd3f6e082c78e8201 234 Pfam PF03741 Integral membrane protein TerC family 14 182 3.6E-43 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABE28_012460 d64951991ea6e20cd3f6e082c78e8201 234 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 12 182 8.2E-68 T 11-10-2018 IPR022301 Integral membrane protein YjbE ABE28_017745 d2a48f41adb3ecc4c712637c0554eb51 409 Pfam PF07690 Major Facilitator Superfamily 15 325 3.5E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_017745 d2a48f41adb3ecc4c712637c0554eb51 409 Gene3D G3DSA:1.20.1250.20 1 383 1.1E-49 T 11-10-2018 ABE28_017745 d2a48f41adb3ecc4c712637c0554eb51 409 SUPERFAMILY SSF103473 7 398 2.09E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_022335 e3af4456562d6711d05e8ad8d3e24fe8 334 SUPERFAMILY SSF81345 4 329 1.83E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_022335 e3af4456562d6711d05e8ad8d3e24fe8 334 Gene3D G3DSA:1.10.3470.10 8 332 8.2E-89 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_022335 e3af4456562d6711d05e8ad8d3e24fe8 334 Pfam PF01032 FecCD transport family 19 329 9.2E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SUPERFAMILY SSF47384 104 186 1.96E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SMART SM00304 59 111 2.5E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SMART SM00387 232 345 1.3E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 Pfam PF00512 His Kinase A (phospho-acceptor) domain 119 185 2.9E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 298 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 PRINTS PR00344 Bacterial sensor protein C-terminal signature 305 323 1.8E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 Gene3D G3DSA:3.30.565.10 187 345 3.9E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 Gene3D G3DSA:1.10.287.130 116 186 2.1E-19 T 11-10-2018 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SMART SM00388 119 186 5.1E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SUPERFAMILY SSF158472 61 108 7.19E-5 T 11-10-2018 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 SUPERFAMILY SSF55874 175 343 3.01E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 Gene3D G3DSA:1.20.1480.50 33 115 9.2E-7 T 11-10-2018 ABE28_004330 71d84b79f9abd3a977bc278555d450ae 346 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 343 7.6E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_019445 ae66f384c7c3f99ed0717317c1c30b8d 300 SUPERFAMILY SSF161098 93 299 4.71E-34 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019445 ae66f384c7c3f99ed0717317c1c30b8d 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 300 1.0E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019445 ae66f384c7c3f99ed0717317c1c30b8d 300 Gene3D G3DSA:1.10.3720.10 86 300 8.6E-28 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019445 ae66f384c7c3f99ed0717317c1c30b8d 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 75 7.6E-14 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABE28_002405 8d116324696556a3288f83915c6db441 685 Pfam PF02554 Carbon starvation protein CstA 32 408 4.9E-171 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ABE28_002405 8d116324696556a3288f83915c6db441 685 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 463 591 1.6E-37 T 11-10-2018 IPR025299 CstA, C-terminal domain ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.943 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 SUPERFAMILY SSF46946 2 114 9.25E-46 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 Gene3D G3DSA:1.10.8.50 1 71 5.4E-30 T 11-10-2018 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.7E-34 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 PIRSF PIRSF002134 1 121 6.4E-43 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 Gene3D G3DSA:4.10.910.10 72 121 7.3E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000705 763050bea5466ca70d77d15676dcc41d 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.6E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_010645 d06987082c6a39a6cc4ee0a3740bb9c4 227 SUPERFAMILY SSF48613 2 220 9.2E-76 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABE28_010645 d06987082c6a39a6cc4ee0a3740bb9c4 227 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 214 1.6E-75 T 11-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 ABE28_010645 d06987082c6a39a6cc4ee0a3740bb9c4 227 Pfam PF03070 TENA/THI-4/PQQC family 9 214 2.4E-59 T 11-10-2018 IPR004305 Thiaminase-2/PQQC ABE28_010645 d06987082c6a39a6cc4ee0a3740bb9c4 227 Gene3D G3DSA:1.20.910.10 1 219 3.5E-66 T 11-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 Pfam PF00347 Ribosomal protein L6 90 164 3.3E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 Pfam PF00347 Ribosomal protein L6 11 82 2.3E-24 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 SUPERFAMILY SSF56053 1 82 8.22E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 4.9E-78 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 Gene3D G3DSA:3.90.930.12 1 82 4.3E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 Gene3D G3DSA:3.90.930.12 83 178 1.7E-40 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 4.0E-34 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 PIRSF PIRSF002162 1 177 2.3E-51 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 39.894 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_000660 186326fbbdb322e1a78570606af79f9c 178 SUPERFAMILY SSF56053 83 177 3.17E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_007145 70abb2331bcdd6947d6c7600c1aff050 371 Gene3D G3DSA:3.40.50.970 5 371 7.6E-121 T 11-10-2018 ABE28_007145 70abb2331bcdd6947d6c7600c1aff050 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 25 364 6.9E-144 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABE28_007145 70abb2331bcdd6947d6c7600c1aff050 371 Pfam PF00676 Dehydrogenase E1 component 53 343 2.4E-101 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_007145 70abb2331bcdd6947d6c7600c1aff050 371 SUPERFAMILY SSF52518 21 366 6.08E-102 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_003810 9ee7f68f3d7325bc01a2108eeb64906d 593 Pfam PF01964 Radical SAM ThiC family 136 556 5.7E-203 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABE28_003810 9ee7f68f3d7325bc01a2108eeb64906d 593 Gene3D G3DSA:3.20.20.540 179 492 3.0E-155 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABE28_003810 9ee7f68f3d7325bc01a2108eeb64906d 593 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 135 559 8.9E-222 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABE28_003810 9ee7f68f3d7325bc01a2108eeb64906d 593 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 135 561 99.012 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABE28_003810 9ee7f68f3d7325bc01a2108eeb64906d 593 Pfam PF13667 ThiC-associated domain 17 93 2.4E-31 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 ABE28_006515 e09f1b15e1d047a1aeb76023621509a9 279 SUPERFAMILY SSF161098 20 267 4.11E-57 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006515 e09f1b15e1d047a1aeb76023621509a9 279 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 10 270 6.8E-100 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABE28_006515 e09f1b15e1d047a1aeb76023621509a9 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 2.2E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_006515 e09f1b15e1d047a1aeb76023621509a9 279 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 15 274 5.9E-126 T 11-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 ABE28_006515 e09f1b15e1d047a1aeb76023621509a9 279 Gene3D G3DSA:1.10.3720.10 19 273 4.4E-68 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Gene3D G3DSA:1.10.101.10 96 168 5.3E-22 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 SUPERFAMILY SSF50685 206 251 9.77E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Pfam PF06725 3D domain 206 264 8.0E-20 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Gene3D G3DSA:1.10.101.10 29 95 3.7E-19 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 SUPERFAMILY SSF47090 97 160 2.25E-18 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Gene3D G3DSA:2.40.40.10 193 258 3.5E-5 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 SUPERFAMILY SSF47090 28 96 6.54E-17 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Pfam PF01471 Putative peptidoglycan binding domain 106 159 2.8E-14 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_019990 3b651a31ae15bfcbf9dd1b32d46665f9 265 Pfam PF01471 Putative peptidoglycan binding domain 39 94 3.7E-12 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_019590 120bd5e20159e9e6ff9495c93169eedf 188 Gene3D G3DSA:1.10.357.10 5 186 3.0E-30 T 11-10-2018 ABE28_019590 120bd5e20159e9e6ff9495c93169eedf 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 63 4.4E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_019590 120bd5e20159e9e6ff9495c93169eedf 188 SUPERFAMILY SSF46689 8 66 3.23E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 349 358 - T 11-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 Pfam PF00067 Cytochrome P450 13 378 1.9E-42 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 SUPERFAMILY SSF48264 17 409 1.03E-84 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00385 P450 superfamily signature 244 261 3.1E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00385 P450 superfamily signature 356 367 3.1E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00385 P450 superfamily signature 347 356 3.1E-5 T 11-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 356 367 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 138 154 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 347 356 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 155 170 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 280 291 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 92 103 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 198 220 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 297 324 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 PRINTS PR00359 B-class P450 signature 325 340 1.1E-50 T 11-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 ABE28_017965 2b6683a6a46fb18f35b0dac7846e5d82 412 Gene3D G3DSA:1.10.630.10 2 411 4.8E-114 T 11-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 Gene3D G3DSA:3.90.1150.10 12 386 2.1E-153 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 Gene3D G3DSA:3.40.640.10 61 296 2.1E-153 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 SUPERFAMILY SSF53383 5 395 8.43E-101 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 243 252 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 Pfam PF00155 Aminotransferase class I and II 45 386 6.2E-75 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_018845 2f0fa9ea03a95b2b85668905bdf7a8eb 410 TIGRFAM TIGR01821 5aminolev_synth: 5-aminolevulinic acid synthase 2 400 1.2E-169 T 11-10-2018 IPR010961 Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase GO:0003870|GO:0030170|GO:0033014 KEGG: 00260+2.3.1.37|KEGG: 00860+2.3.1.37|MetaCyc: PWY-5189|MetaCyc: PWY-7536|Reactome: R-HSA-189451 ABE28_005145 2936a3f3b48814daec8e84d03434b767 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 99 119 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_005145 2936a3f3b48814daec8e84d03434b767 258 Gene3D G3DSA:1.10.12.10 200 258 8.7E-24 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005145 2936a3f3b48814daec8e84d03434b767 258 SUPERFAMILY SSF52096 2 257 2.34E-80 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005145 2936a3f3b48814daec8e84d03434b767 258 Gene3D G3DSA:3.90.226.10 2 199 3.8E-66 T 11-10-2018 ABE28_005145 2936a3f3b48814daec8e84d03434b767 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 7 257 4.6E-60 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_008615 a4630860daee1714aac12b591fd27ad0 630 TIGRFAM TIGR00728 OPT_sfam: oligopeptide transporter, OPT superfamily 17 591 3.3E-62 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 ABE28_008615 a4630860daee1714aac12b591fd27ad0 630 Pfam PF03169 OPT oligopeptide transporter protein 22 587 9.0E-98 T 11-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 ABE28_008615 a4630860daee1714aac12b591fd27ad0 630 TIGRFAM TIGR00733 TIGR00733: oligopeptide transporter, OPT family 22 589 9.7E-119 T 11-10-2018 IPR004814 Oligopeptide transporter OPT ABE28_014670 43863762491940df3cd67a1e99501bc0 302 Gene3D G3DSA:3.20.20.100 1 293 2.1E-104 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_014670 43863762491940df3cd67a1e99501bc0 302 SUPERFAMILY SSF51430 1 296 1.28E-78 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_014670 43863762491940df3cd67a1e99501bc0 302 Pfam PF00248 Aldo/keto reductase family 15 291 4.9E-59 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_014670 43863762491940df3cd67a1e99501bc0 302 PRINTS PR00069 Aldo-keto reductase signature 103 121 7.0E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_014670 43863762491940df3cd67a1e99501bc0 302 PRINTS PR00069 Aldo-keto reductase signature 37 61 7.0E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_014670 43863762491940df3cd67a1e99501bc0 302 PRINTS PR00069 Aldo-keto reductase signature 134 151 7.0E-6 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_021860 c7fb195f7b23467dd034f92d5a8851dd 251 Gene3D G3DSA:3.40.50.300 1 240 1.0E-65 T 11-10-2018 ABE28_021860 c7fb195f7b23467dd034f92d5a8851dd 251 Pfam PF00005 ABC transporter 22 166 2.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_021860 c7fb195f7b23467dd034f92d5a8851dd 251 SUPERFAMILY SSF52540 5 225 6.22E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021860 c7fb195f7b23467dd034f92d5a8851dd 251 SMART SM00382 30 230 5.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_021860 c7fb195f7b23467dd034f92d5a8851dd 251 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 Pfam PF00072 Response regulator receiver domain 3 112 1.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 Gene3D G3DSA:1.10.10.10 124 223 5.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 SMART SM00862 145 220 1.2E-24 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 Gene3D G3DSA:3.40.50.2300 1 120 4.7E-36 T 11-10-2018 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 SMART SM00448 1 111 2.8E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 SUPERFAMILY SSF52172 1 120 2.99E-38 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 SUPERFAMILY SSF46894 126 221 2.47E-25 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_023445 ecde9162091d4b6147300869cc8d27f5 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 1.8E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_002055 854c50a8daa915a64d47d803051bf5cc 340 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 6 332 3.9E-154 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_002055 854c50a8daa915a64d47d803051bf5cc 340 Gene3D G3DSA:3.40.47.40 1 339 1.3E-146 T 11-10-2018 IPR038369 Stage V sporulation AD superfamily ABE28_002055 854c50a8daa915a64d47d803051bf5cc 340 PIRSF PIRSF011570 1 335 2.8E-156 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_002055 854c50a8daa915a64d47d803051bf5cc 340 SUPERFAMILY SSF53901 56 290 2.76E-18 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_002055 854c50a8daa915a64d47d803051bf5cc 340 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 2.1E-153 T 11-10-2018 IPR010894 Stage V sporulation AD ABE28_022910 c5542b9e3698e0c873e7050b4e0b443c 188 Pfam PF02659 Putative manganese efflux pump 34 185 2.7E-38 T 11-10-2018 IPR003810 Putative manganese efflux pump ABE28_022910 c5542b9e3698e0c873e7050b4e0b443c 188 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 6 188 20.914 T 11-10-2018 IPR022929 Putative manganese efflux pump MntP ABE28_004835 5f67c6409eb712cf1d16b89b20fdeef5 298 Pfam PF00849 RNA pseudouridylate synthase 91 243 7.1E-35 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_004835 5f67c6409eb712cf1d16b89b20fdeef5 298 SUPERFAMILY SSF55120 76 289 7.04E-67 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_004835 5f67c6409eb712cf1d16b89b20fdeef5 298 Gene3D G3DSA:3.30.2350.10 72 288 7.8E-69 T 11-10-2018 ABE28_004835 5f67c6409eb712cf1d16b89b20fdeef5 298 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 287 9.2E-75 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_004835 5f67c6409eb712cf1d16b89b20fdeef5 298 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 SUPERFAMILY SSF46785 7 92 4.54E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 SMART SM00895 77 200 4.3E-22 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 67 3.5E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 SMART SM00345 9 67 9.4E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 SUPERFAMILY SSF48008 73 205 9.68E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 Pfam PF07729 FCD domain 77 199 1.2E-21 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 Gene3D G3DSA:1.20.120.530 72 204 9.7E-25 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004990 582bc0cd59c2f527967d25034bcaed95 222 Gene3D G3DSA:1.10.10.10 3 68 1.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017735 12f22e912c16197257560ea9aea25320 146 SMART SM00347 28 132 1.1E-7 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_017735 12f22e912c16197257560ea9aea25320 146 Gene3D G3DSA:1.10.10.10 3 145 3.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017735 12f22e912c16197257560ea9aea25320 146 SUPERFAMILY SSF46785 9 129 1.17E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 Gene3D G3DSA:3.40.50.300 321 506 6.5E-63 T 11-10-2018 ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 SUPERFAMILY SSF52540 335 574 7.88E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 SMART SM00382 355 500 1.4E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 Gene3D G3DSA:3.30.450.20 199 309 5.9E-9 T 11-10-2018 ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 Pfam PF08461 Ribonuclease R winged-helix domain 609 669 8.8E-5 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 359 372 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 422 437 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 Gene3D G3DSA:1.10.8.60 507 581 8.5E-17 T 11-10-2018 ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 SUPERFAMILY SSF55785 203 273 1.49E-5 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 SMART SM00091 212 279 3.6E-5 T 11-10-2018 IPR000014 PAS domain ABE28_008625 c080247f9351084e4fd568a5b50a4b98 673 Pfam PF00158 Sigma-54 interaction domain 336 502 1.2E-63 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_013765 c9aae6da36ca661402565f3832a7e6a7 526 Pfam PF03609 PTS system sorbose-specific iic component 4 234 6.8E-75 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 ABE28_013765 c9aae6da36ca661402565f3832a7e6a7 526 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 262 526 1.3E-90 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 Gene3D G3DSA:3.60.21.10 1 299 8.2E-90 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 Gene3D G3DSA:3.90.780.10 316 510 1.3E-64 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 SUPERFAMILY SSF56300 1 295 1.37E-72 T 11-10-2018 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 PRINTS PR01607 Apyrase family signature 201 224 1.8E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 PRINTS PR01607 Apyrase family signature 176 193 1.8E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 PRINTS PR01607 Apyrase family signature 445 464 1.8E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 PRINTS PR01607 Apyrase family signature 367 390 1.8E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 PRINTS PR01607 Apyrase family signature 238 258 1.8E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 Pfam PF02872 5'-nucleotidase, C-terminal domain 319 471 3.8E-42 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 Pfam PF00149 Calcineurin-like phosphoesterase 1 218 9.9E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_020110 3c28419091afd5e87680b19c8f052ba3 603 SUPERFAMILY SSF55816 321 510 4.97E-52 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_014090 343d6ed472300fc68f168e5410108e32 327 Gene3D G3DSA:3.10.180.10 1 140 1.1E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014090 343d6ed472300fc68f168e5410108e32 327 ProSitePatterns PS00082 Extradiol ring-cleavage dioxygenases signature. 237 258 - T 11-10-2018 IPR000486 Extradiol ring-cleavage dioxygenase, class I /II GO:0003824|GO:0006725|GO:0008198|GO:0055114 ABE28_014090 343d6ed472300fc68f168e5410108e32 327 TIGRFAM TIGR02295 HpaD: 3,4-dihydroxyphenylacetate 2,3-dioxygenase 5 300 8.0E-135 T 11-10-2018 IPR011981 3,4-dihydroxyphenylacetate 2,3-dioxygenase, Mn/Fe-type ABE28_014090 343d6ed472300fc68f168e5410108e32 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 142 259 1.2E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_014090 343d6ed472300fc68f168e5410108e32 327 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 88 4.0E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_014090 343d6ed472300fc68f168e5410108e32 327 Gene3D G3DSA:3.10.180.10 142 301 1.1E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014090 343d6ed472300fc68f168e5410108e32 327 SUPERFAMILY SSF54593 4 310 2.32E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 3 180 25.741 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 Gene3D G3DSA:2.40.240.10 1 94 6.4E-26 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 Pfam PF01386 Ribosomal L25p family 5 91 7.8E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 Gene3D G3DSA:2.170.120.20 97 189 1.7E-28 T 11-10-2018 IPR037121 Ribosomal protein L25, C-terminal ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 5 91 2.0E-20 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 SUPERFAMILY SSF50715 10 182 2.79E-51 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 5 179 5.8E-53 T 11-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 ABE28_000260 4c6997f50ce12c9be873b625462fa92a 212 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 100 182 9.7E-28 T 11-10-2018 IPR020057 Ribosomal protein L25, beta domain ABE28_013850 3efc503819efdf399e121f0a636f441b 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 Pfam PF00171 Aldehyde dehydrogenase family 9 268 2.7E-12 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 Gene3D G3DSA:3.40.309.10 224 372 8.0E-157 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.982 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 SUPERFAMILY SSF53720 2 414 1.83E-107 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 Gene3D G3DSA:3.40.605.10 17 409 8.0E-157 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 6.5E-162 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_013850 3efc503819efdf399e121f0a636f441b 415 PIRSF PIRSF000151 1 415 4.7E-172 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 ABE28_021140 3c6a88eff6af7b3f97ed4702e609163a 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.428 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid ABE28_021140 3c6a88eff6af7b3f97ed4702e609163a 89 Gene3D G3DSA:4.10.830.10 30 89 3.2E-25 T 11-10-2018 ABE28_021140 3c6a88eff6af7b3f97ed4702e609163a 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 5.2E-29 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_021140 3c6a88eff6af7b3f97ed4702e609163a 89 SUPERFAMILY SSF57716 2 89 2.21E-30 T 11-10-2018 ABE28_001550 e0046b52c170320d66a10f9706448a7c 168 Gene3D G3DSA:3.30.70.640 1 163 8.5E-65 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_001550 e0046b52c170320d66a10f9706448a7c 168 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 33.723 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_001550 e0046b52c170320d66a10f9706448a7c 168 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 3.1E-61 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_001550 e0046b52c170320d66a10f9706448a7c 168 SUPERFAMILY SSF55040 11 155 7.32E-54 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_001550 e0046b52c170320d66a10f9706448a7c 168 Pfam PF01967 MoaC family 15 152 3.3E-52 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_010955 cc029fa0a492ed80126bffb249749742 453 PIRSF PIRSF006446 1 451 1.4E-110 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABE28_010955 cc029fa0a492ed80126bffb249749742 453 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 431 3.0E-118 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 ABE28_007040 5425a87485e1cb37a54105be99cfe36c 288 Pfam PF00149 Calcineurin-like phosphoesterase 59 224 2.8E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_007040 5425a87485e1cb37a54105be99cfe36c 288 SUPERFAMILY SSF56300 56 283 1.67E-35 T 11-10-2018 ABE28_007040 5425a87485e1cb37a54105be99cfe36c 288 Gene3D G3DSA:3.60.21.10 57 259 1.3E-25 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_000190 8b2dc437b8c039a1566f9d442cd6874c 292 PIRSF PIRSF011575 2 290 1.0E-111 T 11-10-2018 IPR008764 Peptidase U57, YabG ABE28_000190 8b2dc437b8c039a1566f9d442cd6874c 292 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 3 280 4.0E-112 T 11-10-2018 IPR008764 Peptidase U57, YabG ABE28_000190 8b2dc437b8c039a1566f9d442cd6874c 292 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 286 5.3E-131 T 11-10-2018 IPR008764 Peptidase U57, YabG ABE28_000190 8b2dc437b8c039a1566f9d442cd6874c 292 Pfam PF05582 YabG peptidase U57 5 285 8.3E-112 T 11-10-2018 IPR008764 Peptidase U57, YabG ABE28_001035 d3a74db7139be8e153dd71f3b93010a7 544 Pfam PF13556 PucR C-terminal helix-turn-helix domain 464 518 5.4E-16 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_001035 d3a74db7139be8e153dd71f3b93010a7 544 Pfam PF07905 Purine catabolism regulatory protein-like family 10 128 2.0E-33 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ABE28_001035 d3a74db7139be8e153dd71f3b93010a7 544 Gene3D G3DSA:1.10.10.2840 395 524 3.4E-16 T 11-10-2018 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Pfam PF00694 Aconitase C-terminal domain 702 829 5.2E-44 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 901 0.0 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 SUPERFAMILY SSF52016 641 900 3.14E-83 T 11-10-2018 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 ProSitePatterns PS00450 Aconitase family signature 1. 437 453 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Gene3D G3DSA:1.10.1440.20 601 661 1.8E-21 T 11-10-2018 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Gene3D G3DSA:3.20.19.10 665 902 3.6E-100 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 ProSitePatterns PS01244 Aconitase family signature 2. 503 516 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Pfam PF00330 Aconitase family (aconitate hydratase) 76 572 2.8E-175 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 375 389 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 147 160 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 281 294 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 205 218 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 171 179 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 295 308 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 503 516 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 441 452 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 PRINTS PR00415 Aconitase family signature 219 234 5.9E-42 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Gene3D G3DSA:3.30.499.10 376 600 1.8E-102 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 Gene3D G3DSA:3.30.499.20 4 375 2.4E-158 T 11-10-2018 ABE28_010705 04109ec3dab03d39a52eb72ee5276e2f 903 SUPERFAMILY SSF53732 5 637 9.55E-226 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABE28_020175 35033787d0dadb4728af8506ad2a1843 445 Pfam PF02386 Cation transport protein 37 427 1.5E-59 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ABE28_020175 35033787d0dadb4728af8506ad2a1843 445 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 28 416 1.8E-111 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 ABE28_022535 a7955426b90917d87019fc2279ec61ae 387 Gene3D G3DSA:3.40.50.2000 179 366 8.2E-65 T 11-10-2018 ABE28_022535 a7955426b90917d87019fc2279ec61ae 387 SUPERFAMILY SSF53756 3 387 1.07E-65 T 11-10-2018 ABE28_022535 a7955426b90917d87019fc2279ec61ae 387 Gene3D G3DSA:3.40.50.2000 11 383 8.2E-65 T 11-10-2018 ABE28_022535 a7955426b90917d87019fc2279ec61ae 387 Pfam PF13439 Glycosyltransferase Family 4 15 181 1.1E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_022535 a7955426b90917d87019fc2279ec61ae 387 Pfam PF00534 Glycosyl transferases group 1 191 364 9.5E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Gene3D G3DSA:2.40.50.140 136 197 8.3E-25 T 11-10-2018 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SUPERFAMILY SSF54814 278 341 7.85E-16 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Pfam PF13184 NusA-like KH domain 229 296 1.6E-28 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SMART SM00322 302 356 4.6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SMART SM00322 229 301 5.2E-5 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Pfam PF08529 NusA N-terminal domain 4 123 8.8E-42 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SUPERFAMILY SSF54814 199 277 2.03E-30 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Pfam PF00575 S1 RNA binding domain 133 193 2.3E-10 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Gene3D G3DSA:3.30.300.20 277 376 1.4E-33 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Gene3D G3DSA:3.30.1480.10 1 124 1.2E-47 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SUPERFAMILY SSF50249 132 198 1.25E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 375 30.222 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SUPERFAMILY SSF69705 1 126 1.26E-41 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 SMART SM00316 133 199 2.1E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 3.3E-127 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 ABE28_008150 afcd29cf91f7dc628c4029f1b6bed07a 376 Gene3D G3DSA:3.30.300.20 198 276 2.8E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 SUPERFAMILY SSF51306 35 191 1.62E-52 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 ProSitePatterns PS00760 Signal peptidases I lysine active site. 89 101 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 Gene3D G3DSA:2.10.109.10 67 193 5.7E-46 T 11-10-2018 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 37 53 9.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 87 99 9.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 146 165 9.7E-22 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 20 186 3.8E-56 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 ProSitePatterns PS00501 Signal peptidases I serine active site. 46 53 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 ABE28_017490 fd346169e1fd52598bbfae1dad1bbec7 193 Pfam PF00717 Peptidase S24-like 44 111 3.3E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 Gene3D G3DSA:3.40.50.720 1 187 2.0E-58 T 11-10-2018 ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 191 287 2.8E-30 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 9 187 2.2E-55 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 PIRSF PIRSF000105 1 294 1.8E-92 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 SUPERFAMILY SSF51735 5 188 2.54E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 Gene3D G3DSA:1.10.1040.10 193 294 2.2E-33 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_006845 3e57ea3d4e4930a681a709cf0d69ed0f 294 SUPERFAMILY SSF48179 191 291 2.3E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 PRINTS PR01438 Universal stress protein signature 105 117 2.5E-19 T 11-10-2018 IPR006015 Universal stress protein A ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 PRINTS PR01438 Universal stress protein signature 6 24 2.5E-19 T 11-10-2018 IPR006015 Universal stress protein A ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 PRINTS PR01438 Universal stress protein signature 123 145 2.5E-19 T 11-10-2018 IPR006015 Universal stress protein A ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 Pfam PF00582 Universal stress protein family 6 145 4.0E-36 T 11-10-2018 IPR006016 UspA ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 SUPERFAMILY SSF52402 6 146 3.43E-37 T 11-10-2018 ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 Gene3D G3DSA:3.40.50.620 8 145 2.8E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017080 16cf46bcc6e2ad82a65e2d04ab5bd182 150 PIRSF PIRSF006276 1 148 1.3E-21 T 11-10-2018 IPR006015 Universal stress protein A ABE28_012560 bbccda0c0c1ced0b8580901b1f0f5e81 237 Gene3D G3DSA:3.90.550.10 1 236 6.4E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012560 bbccda0c0c1ced0b8580901b1f0f5e81 237 SUPERFAMILY SSF53448 3 214 5.63E-55 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012560 bbccda0c0c1ced0b8580901b1f0f5e81 237 Pfam PF00535 Glycosyl transferase family 2 6 124 1.2E-27 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_009890 906e18eb3b15d7f6406ea5363e7be6a2 168 Gene3D G3DSA:3.40.50.300 6 165 2.2E-14 T 11-10-2018 ABE28_009890 906e18eb3b15d7f6406ea5363e7be6a2 168 Pfam PF13238 AAA domain 9 118 1.6E-7 T 11-10-2018 ABE28_009890 906e18eb3b15d7f6406ea5363e7be6a2 168 SUPERFAMILY SSF52540 6 164 1.1E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013530 90f768fcba9ef91dda40ec927ecf5f8f 167 Gene3D G3DSA:1.20.120.450 1 150 9.4E-40 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_013530 90f768fcba9ef91dda40ec927ecf5f8f 167 SUPERFAMILY SSF109854 7 152 1.02E-28 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_013530 90f768fcba9ef91dda40ec927ecf5f8f 167 Pfam PF05163 DinB family 1 157 5.4E-32 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 SUPERFAMILY SSF52540 1 270 2.3E-126 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 Gene3D G3DSA:3.40.50.880 288 535 2.5E-102 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 Pfam PF06418 CTP synthase N-terminus 3 267 1.2E-129 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 52.525 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 SUPERFAMILY SSF52317 289 532 6.64E-84 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 Gene3D G3DSA:3.40.50.300 1 286 2.6E-135 T 11-10-2018 ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 Pfam PF00117 Glutamine amidotransferase class-I 302 525 2.7E-59 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_022985 df58b5842c5401e6ce5c265dfa066df1 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 525 4.8E-263 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 Gene3D G3DSA:1.10.10.10 1 52 1.7E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 SUPERFAMILY SSF54909 64 133 3.49E-14 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 Gene3D G3DSA:3.30.70.920 53 136 6.4E-18 T 11-10-2018 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 SMART SM00344 1 105 1.3E-33 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 6.3E-17 T 11-10-2018 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 Pfam PF01037 Lrp/AsnC ligand binding domain 73 131 6.1E-11 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 SUPERFAMILY SSF46785 1 59 2.15E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 8.2E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 8.2E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_019880 7c1308b1bcbef364b29b98fbb5a76a5e 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 8.2E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_004120 3a08dbca647aff3c176f5dd6131acf9e 192 Gene3D G3DSA:3.30.1330.110 1 191 2.6E-67 T 11-10-2018 IPR035936 BB2672 superfamily ABE28_004120 3a08dbca647aff3c176f5dd6131acf9e 192 Pfam PF06684 Amino acid synthesis 4 180 1.1E-66 T 11-10-2018 IPR009569 Amino acid synthesis, putative ABE28_004120 3a08dbca647aff3c176f5dd6131acf9e 192 SUPERFAMILY SSF160519 2 189 1.7E-66 T 11-10-2018 IPR035936 BB2672 superfamily ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 Gene3D G3DSA:3.30.1240.10 82 209 1.4E-82 T 11-10-2018 ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 253 4.0E-30 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 SUPERFAMILY SSF56784 2 284 6.56E-63 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 280 7.9E-59 T 11-10-2018 IPR000150 Cof family GO:0016787 ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 Gene3D G3DSA:3.40.50.1000 3 277 1.4E-82 T 11-10-2018 IPR023214 HAD superfamily ABE28_023195 ae0bcd72a40baf3f7405811cf1a8292a 289 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 280 2.5E-64 T 11-10-2018 ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Pfam PF00580 UvrD/REP helicase N-terminal domain 142 404 2.7E-56 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Gene3D G3DSA:1.10.10.160 247 322 3.3E-79 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Gene3D G3DSA:3.40.50.300 141 405 3.3E-79 T 11-10-2018 ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 SUPERFAMILY SSF52540 137 756 1.71E-128 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Gene3D G3DSA:3.40.50.300 413 755 2.7E-75 T 11-10-2018 ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Pfam PF13361 UvrD-like helicase C-terminal domain 410 742 3.0E-45 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABE28_006270 a0d7458ef92ab28be41c66ff9aac98b5 757 Gene3D G3DSA:1.10.486.10 515 667 2.7E-75 T 11-10-2018 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 8 214 5.0E-83 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 SMART SM00987 51 211 4.5E-37 T 11-10-2018 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 SUPERFAMILY SSF52141 5 222 5.89E-94 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 Gene3D G3DSA:3.40.470.10 2 224 1.0E-97 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 59 68 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 Pfam PF03167 Uracil DNA glycosylase superfamily 53 210 4.7E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 7 222 41.569 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_023130 c2900c75ed2ced94508cfe21f9c58927 224 SMART SM00986 51 211 4.5E-37 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 ABE28_005640 4a1c7335daf15aa539787e00e81743ac 62 Pfam PF14120 YhzD-like protein 4 62 3.0E-29 T 11-10-2018 IPR025544 YhzD-like protein ABE28_017160 95fc0b6af9ecafe98c1d8fcb6cf42799 324 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 316 1.0E-77 T 11-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ABE28_017160 95fc0b6af9ecafe98c1d8fcb6cf42799 324 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 3.8E-107 T 11-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 Gene3D G3DSA:3.40.50.2300 64 309 2.2E-80 T 11-10-2018 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 SUPERFAMILY SSF47413 4 62 2.19E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 SMART SM00354 4 74 3.4E-32 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 Gene3D G3DSA:1.10.260.40 1 62 2.8E-20 T 11-10-2018 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 310 2.0E-31 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 50 9.7E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 Gene3D G3DSA:3.40.50.2300 163 292 2.2E-80 T 11-10-2018 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 11-10-2018 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 SUPERFAMILY SSF53822 64 334 8.83E-77 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 8.4E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_010120 a88ce91cd52a50f7a3c7e5c4498903d4 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 8.4E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 Gene3D G3DSA:3.40.50.720 1 247 4.9E-86 T 11-10-2018 ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 SUPERFAMILY SSF51735 4 246 3.38E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.4E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 4.8E-73 T 11-10-2018 ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009605 52e087dc8b756301069a744f16fe1a94 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.8E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007845 60b144b44ff538609142728f88dd8130 172 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 4.0E-50 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABE28_007845 60b144b44ff538609142728f88dd8130 172 Gene3D G3DSA:2.40.30.60 5 93 4.9E-17 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 ABE28_007845 60b144b44ff538609142728f88dd8130 172 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 23.286 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 ABE28_007845 60b144b44ff538609142728f88dd8130 172 Gene3D G3DSA:2.30.30.240 95 172 9.2E-21 T 11-10-2018 ABE28_007845 60b144b44ff538609142728f88dd8130 172 SUPERFAMILY SSF50346 100 170 3.92E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ABE28_007845 60b144b44ff538609142728f88dd8130 172 Pfam PF05239 PRC-barrel domain 97 171 7.3E-14 T 11-10-2018 IPR027275 PRC-barrel domain ABE28_007845 60b144b44ff538609142728f88dd8130 172 SUPERFAMILY SSF50447 3 92 1.05E-19 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_007845 60b144b44ff538609142728f88dd8130 172 Pfam PF01782 RimM N-terminal domain 7 90 3.3E-19 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 300 306 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 Pfam PF02926 THUMP domain 14 154 4.3E-11 T 11-10-2018 IPR004114 THUMP domain GO:0003723 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 196 207 - T 11-10-2018 IPR000241 Putative RNA methylase domain ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 Gene3D G3DSA:3.40.50.150 161 365 1.5E-123 T 11-10-2018 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 SMART SM00981 57 155 1.4E-8 T 11-10-2018 IPR004114 THUMP domain GO:0003723 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 Pfam PF01170 Putative RNA methylase family UPF0020 163 366 3.5E-64 T 11-10-2018 IPR000241 Putative RNA methylase domain ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 Gene3D G3DSA:3.30.2130.30 8 246 1.5E-123 T 11-10-2018 ABE28_013970 97629cf9b9dba26ad46b42e133be2310 383 SUPERFAMILY SSF53335 142 369 1.9E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007320 8d2a2235249c0921d721ac08c57ebafa 209 Pfam PF00510 Cytochrome c oxidase subunit III 27 206 8.5E-20 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007320 8d2a2235249c0921d721ac08c57ebafa 209 Gene3D G3DSA:1.20.120.80 21 208 2.0E-51 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007320 8d2a2235249c0921d721ac08c57ebafa 209 SUPERFAMILY SSF81452 21 206 1.44E-53 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 Gene3D G3DSA:3.20.20.140 1 255 3.3E-114 T 11-10-2018 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 SUPERFAMILY SSF51556 1 254 4.9E-99 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 4.5E-102 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 PIRSF PIRSF005902 1 255 7.3E-94 T 11-10-2018 IPR001130 TatD family GO:0016788 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABE28_000170 bcbe8c8f026b903937d5c685cbf4bc71 255 Pfam PF01026 TatD related DNase 3 252 7.9E-92 T 11-10-2018 IPR001130 TatD family GO:0016788 ABE28_017120 83781233d6d55e89594283e774351166 166 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 37.813 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_017120 83781233d6d55e89594283e774351166 166 SUPERFAMILY SSF52833 1 160 1.63E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_017120 83781233d6d55e89594283e774351166 166 Pfam PF08534 Redoxin 19 158 3.5E-24 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ABE28_017120 83781233d6d55e89594283e774351166 166 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_017120 83781233d6d55e89594283e774351166 166 Gene3D G3DSA:3.40.30.10 1 165 5.5E-48 T 11-10-2018 ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 SMART SM00345 22 80 2.9E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 Gene3D G3DSA:1.10.10.10 16 81 4.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 Gene3D G3DSA:1.20.120.530 84 221 2.1E-31 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 Pfam PF07729 FCD domain 90 215 4.0E-28 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 Pfam PF00392 Bacterial regulatory proteins, gntR family 20 80 4.0E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 SUPERFAMILY SSF46785 17 84 1.61E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 SUPERFAMILY SSF48008 86 217 8.63E-27 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 SMART SM00895 90 216 3.4E-21 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 54 5.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_004110 9998310ddbd6b00fafcb92582727b94e 233 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 54 70 5.5E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_022355 f7de0b011de970a05a2e19b26cc81ad0 461 Gene3D G3DSA:1.20.5.340 25 103 2.7E-6 T 11-10-2018 ABE28_022355 f7de0b011de970a05a2e19b26cc81ad0 461 Pfam PF01551 Peptidase family M23 352 455 3.2E-27 T 11-10-2018 IPR016047 Peptidase M23 ABE28_022355 f7de0b011de970a05a2e19b26cc81ad0 461 Gene3D G3DSA:2.70.70.10 317 459 4.0E-36 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_022355 f7de0b011de970a05a2e19b26cc81ad0 461 SUPERFAMILY SSF51261 261 459 5.02E-42 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 PIRSF PIRSF001235 7 410 1.2E-136 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 Gene3D G3DSA:3.30.70.360 213 326 1.2E-140 T 11-10-2018 ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 SUPERFAMILY SSF53187 7 407 2.43E-90 T 11-10-2018 ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 Gene3D G3DSA:3.40.630.10 18 402 1.2E-140 T 11-10-2018 ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 SUPERFAMILY SSF55031 213 323 1.47E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 Pfam PF01546 Peptidase family M20/M25/M40 81 405 1.5E-31 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_011345 99986a3d21808abaf14fd7ea00723dda 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 12 407 2.7E-125 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_002120 82ff53342f34060cdd14b17c38d9fe79 415 Pfam PF12733 Cadherin-like beta sandwich domain 325 404 4.9E-8 T 11-10-2018 IPR025883 Cadherin-like beta sandwich domain ABE28_002120 82ff53342f34060cdd14b17c38d9fe79 415 Pfam PF12733 Cadherin-like beta sandwich domain 146 231 1.5E-16 T 11-10-2018 IPR025883 Cadherin-like beta sandwich domain ABE28_002120 82ff53342f34060cdd14b17c38d9fe79 415 Pfam PF12733 Cadherin-like beta sandwich domain 50 137 1.3E-14 T 11-10-2018 IPR025883 Cadherin-like beta sandwich domain ABE28_019765 d36ca8cf11d15463efcee6a102dbd91d 339 SUPERFAMILY SSF56601 10 324 9.47E-55 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019765 d36ca8cf11d15463efcee6a102dbd91d 339 Pfam PF00144 Beta-lactamase 22 319 8.6E-42 T 11-10-2018 IPR001466 Beta-lactamase-related ABE28_019765 d36ca8cf11d15463efcee6a102dbd91d 339 Gene3D G3DSA:3.40.710.10 4 321 1.1E-53 T 11-10-2018 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 Gene3D G3DSA:3.20.20.240 40 556 6.3E-238 T 11-10-2018 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 ProSitePatterns PS00544 Methylmalonyl-CoA mutase signature. 383 408 - T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 SUPERFAMILY SSF52242 560 723 6.67E-56 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 Pfam PF02310 B12 binding domain 596 706 1.3E-14 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 Gene3D G3DSA:3.40.50.280 560 722 8.2E-54 T 11-10-2018 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 TIGRFAM TIGR00640 acid_CoA_mut_C: methylmalonyl-CoA mutase C-terminal domain 593 721 6.7E-59 T 11-10-2018 IPR006159 Methylmalonyl-CoA mutase, C-terminal GO:0016853 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 SUPERFAMILY SSF51703 19 556 1.05E-219 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 Pfam PF01642 Methylmalonyl-CoA mutase 41 554 2.8E-234 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014845 8e2e114e3dae95338b3efd9ff53acfc9 730 TIGRFAM TIGR00641 acid_CoA_mut_N: methylmalonyl-CoA mutase N-terminal domain 40 561 1.1E-267 T 11-10-2018 IPR006098 Methylmalonyl-CoA mutase, alpha chain, catalytic GO:0004494|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 8.2E-53 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 Gene3D G3DSA:3.40.50.720 1 170 5.5E-73 T 11-10-2018 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 3.4E-75 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 3.0E-49 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 SUPERFAMILY SSF56327 173 439 2.95E-96 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 SUPERFAMILY SSF51735 4 168 5.63E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011570 3980199f6c8442efcd77c36582e8f90c 442 Gene3D G3DSA:3.90.110.10 171 442 9.2E-104 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_008575 93b26005beb5db86d252fc1c741c465a 132 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 2.8E-41 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 ABE28_008575 93b26005beb5db86d252fc1c741c465a 132 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 95 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_008575 93b26005beb5db86d252fc1c741c465a 132 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 103 9.8E-15 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_008575 93b26005beb5db86d252fc1c741c465a 132 SUPERFAMILY SSF53927 3 128 2.51E-42 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_008575 93b26005beb5db86d252fc1c741c465a 132 Gene3D G3DSA:3.40.140.10 1 128 2.0E-50 T 11-10-2018 ABE28_001300 a8961a07c72fab3a91f4eef5ed0a72cc 279 Pfam PF00589 Phage integrase family 111 263 7.9E-30 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_001300 a8961a07c72fab3a91f4eef5ed0a72cc 279 Gene3D G3DSA:1.10.150.130 2 95 8.4E-22 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ABE28_001300 a8961a07c72fab3a91f4eef5ed0a72cc 279 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 13 86 2.4E-10 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABE28_001300 a8961a07c72fab3a91f4eef5ed0a72cc 279 Gene3D G3DSA:1.10.443.10 99 278 6.7E-44 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_001300 a8961a07c72fab3a91f4eef5ed0a72cc 279 SUPERFAMILY SSF56349 14 273 6.18E-46 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 SUPERFAMILY SSF51735 108 288 4.96E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 TIGRFAM TIGR02824 quinone_pig3: putative NAD(P)H quinone oxidoreductase, PIG3 family 1 324 1.2E-112 T 11-10-2018 IPR014189 Quinone oxidoreductase PIG3 Reactome: R-HSA-6803205 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 SMART SM00829 10 322 1.5E-46 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 Pfam PF00107 Zinc-binding dehydrogenase 148 270 1.5E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 Gene3D G3DSA:3.40.50.720 117 261 6.5E-104 T 11-10-2018 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 SUPERFAMILY SSF50129 1 135 2.28E-37 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 Gene3D G3DSA:3.90.180.10 13 322 6.5E-104 T 11-10-2018 ABE28_003835 9244d18bfa2a547228cfe2f794d965c6 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 83 1.7E-6 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_018555 e16a2c28fc89c0d3fcefcba43b7cb896 447 SUPERFAMILY SSF49265 142 203 2.81E-5 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABE28_018555 e16a2c28fc89c0d3fcefcba43b7cb896 447 Gene3D G3DSA:2.60.40.10 141 211 4.4E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_018555 e16a2c28fc89c0d3fcefcba43b7cb896 447 Pfam PF11579 Protein of unknown function (DUF3238) 266 410 1.5E-9 T 11-10-2018 IPR021631 Protein of unknown function DUF3238 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 Gene3D G3DSA:3.40.309.10 259 453 2.3E-168 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 Pfam PF00171 Aldehyde dehydrogenase family 18 484 1.0E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 SUPERFAMILY SSF53720 8 486 2.23E-162 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_018950 15a6db926fee4c9f3f149a0ca19f6fba 488 Gene3D G3DSA:3.40.605.10 14 482 2.3E-168 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_006110 676c3700c842114e4cb8c2a7f894ffba 251 Hamap MF_01860 UPF0736 protein . 1 251 48.97 T 11-10-2018 IPR020909 UPF0736 ABE28_006110 676c3700c842114e4cb8c2a7f894ffba 251 Pfam PF12227 Protein of unknown function (DUF3603) 35 246 5.8E-109 T 11-10-2018 IPR020909 UPF0736 ABE28_022710 a493544aa3fce62378aafc33dfa65d4d 142 Pfam PF07977 FabA-like domain 11 134 1.9E-35 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABE28_022710 a493544aa3fce62378aafc33dfa65d4d 142 Gene3D G3DSA:3.10.129.10 1 140 3.8E-59 T 11-10-2018 ABE28_022710 a493544aa3fce62378aafc33dfa65d4d 142 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 8.1E-59 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABE28_022710 a493544aa3fce62378aafc33dfa65d4d 142 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 35.503 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABE28_022710 a493544aa3fce62378aafc33dfa65d4d 142 SUPERFAMILY SSF54637 4 139 1.36E-48 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 SUPERFAMILY SSF52283 1 360 2.3E-62 T 11-10-2018 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 SMART SM01002 148 297 7.8E-92 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 6.9E-45 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 SUPERFAMILY SSF51735 136 303 1.0E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 1.9E-84 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 11-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 Gene3D G3DSA:3.40.50.720 129 305 3.0E-139 T 11-10-2018 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.8E-181 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 SMART SM01003 4 136 3.4E-72 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 Gene3D G3DSA:3.40.50.720 3 353 3.0E-139 T 11-10-2018 ABE28_004790 df3cf176cf1c9ab39cf372a78be7a68b 377 PIRSF PIRSF000183 1 371 1.6E-189 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 Gene3D G3DSA:3.50.50.60 116 228 2.4E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 279 1.7E-31 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 SUPERFAMILY SSF51905 1 300 4.71E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 Gene3D G3DSA:3.50.50.60 6 291 2.4E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 140 164 2.3E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 2.3E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 261 279 2.3E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 125 137 2.3E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 103 111 2.3E-17 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.5E-16 T 11-10-2018 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.5E-16 T 11-10-2018 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.5E-16 T 11-10-2018 ABE28_012725 12d88be7a8b6f471d47c17577f3e884f 305 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 2.5E-16 T 11-10-2018 ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 SMART SM00116 87 135 0.77 T 11-10-2018 IPR000644 CBS domain ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 SMART SM00116 154 205 0.0025 T 11-10-2018 IPR000644 CBS domain ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 PIRSF PIRSF026546 5 211 1.9E-100 T 11-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 Pfam PF08279 HTH domain 10 62 3.4E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 Gene3D G3DSA:1.10.10.10 2 64 8.0E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 Gene3D G3DSA:3.10.580.10 65 212 3.2E-58 T 11-10-2018 ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 SUPERFAMILY SSF54631 71 205 2.02E-22 T 11-10-2018 ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 Pfam PF00571 CBS domain 87 134 1.2E-5 T 11-10-2018 IPR000644 CBS domain ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 Pfam PF00571 CBS domain 148 204 2.7E-6 T 11-10-2018 IPR000644 CBS domain ABE28_015385 732ceb7db74ee91b31c24bed994cad39 212 SUPERFAMILY SSF46785 7 77 4.61E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 111 194 1.7E-14 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 273 35.347 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 SUPERFAMILY SSF51735 102 275 1.75E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 Gene3D G3DSA:3.40.50.720 101 241 7.2E-97 T 11-10-2018 ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 9.6E-31 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 SUPERFAMILY SSF53223 2 101 4.32E-34 T 11-10-2018 ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 275 3.6E-91 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABE28_015610 431ab0e8295e78c8dfdb5d943aef921d 280 Gene3D G3DSA:3.40.50.10860 5 260 7.2E-97 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 SUPERFAMILY SSF52540 71 296 2.07E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 Gene3D G3DSA:3.40.50.300 66 293 2.7E-45 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 Hamap MF_01498 DNA repair protein RadA [radA]. 22 460 44.895 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 326 349 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 217 245 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 86 114 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 178 202 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 128 145 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 252 278 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 PRINTS PR01874 DNA repair protein radA signature 11 35 9.4E-94 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 Gene3D G3DSA:3.30.230.10 294 462 1.0E-21 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 SMART SM00382 94 248 7.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 Pfam PF13541 Subunit ChlI of Mg-chelatase 370 434 4.3E-9 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 Pfam PF13481 AAA domain 77 226 4.1E-19 T 11-10-2018 ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 SUPERFAMILY SSF54211 259 460 2.54E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000445 da5f72cbbf275622899c1cd65e1d3d9d 462 TIGRFAM TIGR00416 sms: DNA repair protein RadA 4 456 9.9E-216 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 ABE28_015105 1992b910f97536c0be3fbb0523513441 159 Pfam PF15980 Putative Competence protein ComGF 57 142 8.8E-21 T 11-10-2018 IPR016977 Competence operon G, ComGF ABE28_015105 1992b910f97536c0be3fbb0523513441 159 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 19 40 6.0E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABE28_015105 1992b910f97536c0be3fbb0523513441 159 Pfam PF07963 Prokaryotic N-terminal methylation motif 15 39 1.7E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site ABE28_020775 323131ec3d963a90bce922ee7961fdf5 354 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 51 305 3.3E-81 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABE28_020775 323131ec3d963a90bce922ee7961fdf5 354 PIRSF PIRSF006470 19 350 1.3E-108 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABE28_020775 323131ec3d963a90bce922ee7961fdf5 354 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 51 333 1.7E-87 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 ABE28_020775 323131ec3d963a90bce922ee7961fdf5 354 Gene3D G3DSA:3.40.190.170 46 348 3.7E-88 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 128 147 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 183 203 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 6.9E-60 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 Gene3D G3DSA:3.30.420.40 150 313 1.1E-129 T 11-10-2018 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 SUPERFAMILY SSF53067 146 328 3.43E-49 T 11-10-2018 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 Pfam PF06723 MreB/Mbl protein 7 330 6.5E-151 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 SUPERFAMILY SSF53067 8 142 4.61E-38 T 11-10-2018 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 332 1.7E-157 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 Gene3D G3DSA:3.30.420.40 9 323 1.1E-129 T 11-10-2018 ABE28_016385 b2a64f7b9b3412b25fc8f33d09bef3b7 339 Gene3D G3DSA:3.90.640.10 182 255 1.1E-129 T 11-10-2018 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 Gene3D G3DSA:1.10.287.130 179 296 1.1E-24 T 11-10-2018 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 Pfam PF00672 HAMP domain 176 226 3.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 SMART SM00388 230 297 6.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 293 1.9E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 SUPERFAMILY SSF55874 293 445 2.75E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 SMART SM00387 339 449 2.4E-33 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 SMART SM00304 175 229 1.7E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 SUPERFAMILY SSF47384 214 292 4.9E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 Gene3D G3DSA:3.30.565.10 298 449 7.1E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 2.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 2.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 2.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 2.0E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_021990 3befd175c57ce0c08bce276a296c4b38 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 446 2.6E-24 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002480 47f7ec263967348050f60837c4340c08 488 Pfam PF03703 Bacterial PH domain 399 477 8.2E-5 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_002480 47f7ec263967348050f60837c4340c08 488 Pfam PF03703 Bacterial PH domain 65 144 1.3E-15 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_002480 47f7ec263967348050f60837c4340c08 488 Pfam PF03703 Bacterial PH domain 256 332 3.8E-13 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_002480 47f7ec263967348050f60837c4340c08 488 PIRSF PIRSF026631 1 488 2.2E-91 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 ABE28_003410 7468d10ede91c085fc4bed0e6e796c9c 448 Pfam PF00860 Permease family 9 385 7.7E-94 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_003410 7468d10ede91c085fc4bed0e6e796c9c 448 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 6 415 6.4E-110 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 ABE28_003410 7468d10ede91c085fc4bed0e6e796c9c 448 TIGRFAM TIGR03173 pbuX: xanthine permease 12 418 7.1E-140 T 11-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 ABE28_002115 07fbfca4a5b825318f8680347643b80c 546 SUPERFAMILY SSF81296 24 120 1.12E-19 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_002115 07fbfca4a5b825318f8680347643b80c 546 Pfam PF04234 CopC domain 24 119 4.4E-20 T 11-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 ABE28_002115 07fbfca4a5b825318f8680347643b80c 546 Pfam PF13115 YtkA-like 447 526 1.9E-7 T 11-10-2018 IPR032693 YtkA-like domain ABE28_002115 07fbfca4a5b825318f8680347643b80c 546 Pfam PF05425 Copper resistance protein D 334 425 1.4E-18 T 11-10-2018 IPR008457 Copper resistance protein D GO:0016021 ABE28_002115 07fbfca4a5b825318f8680347643b80c 546 Gene3D G3DSA:2.60.40.1220 24 126 2.4E-24 T 11-10-2018 ABE28_008760 07b03c9ceb169817378e115f06e0a6b2 383 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 67 123 3.0E-17 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABE28_008760 07b03c9ceb169817378e115f06e0a6b2 383 SUPERFAMILY SSF56349 65 371 2.0E-62 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_008760 07b03c9ceb169817378e115f06e0a6b2 383 Gene3D G3DSA:1.10.150.130 63 167 1.2E-27 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ABE28_008760 07b03c9ceb169817378e115f06e0a6b2 383 Pfam PF00589 Phage integrase family 194 364 3.2E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_008760 07b03c9ceb169817378e115f06e0a6b2 383 Gene3D G3DSA:1.10.443.10 168 378 3.5E-48 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Gene3D G3DSA:1.10.150.20 290 354 1.8E-24 T 11-10-2018 ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 SUPERFAMILY SSF47781 282 347 5.19E-11 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 9 354 41.597 T 11-10-2018 IPR023763 DNA integrity scanning protein, DisA ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Gene3D G3DSA:3.40.1700.10 8 143 2.7E-55 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Gene3D G3DSA:1.20.1260.110 144 288 7.6E-39 T 11-10-2018 IPR038331 DisA, linker domain superfamily ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 SUPERFAMILY SSF143597 18 143 1.12E-28 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 143 278 7.8E-44 T 11-10-2018 IPR018906 DNA integrity scanning, DisA, linker region ABE28_000450 aa572737d1bec0dc40f24e6ee1da2e58 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 26 137 4.5E-27 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 PIRSF PIRSF035805 5 200 2.0E-63 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 SUPERFAMILY SSF52540 8 142 9.74E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.69 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 Pfam PF00265 Thymidine kinase 8 187 2.7E-56 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 Gene3D G3DSA:3.30.60.20 142 201 6.4E-27 T 11-10-2018 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 Gene3D G3DSA:3.40.50.300 1 141 4.0E-56 T 11-10-2018 ABE28_022940 b855851fbd77f5fa9566256f8dd5bef8 201 SUPERFAMILY SSF57716 142 194 2.09E-16 T 11-10-2018 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 SMART SM00849 21 226 1.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 403 1.2E-9 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Gene3D G3DSA:3.40.50.10710 208 366 2.4E-169 T 11-10-2018 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 PIRSF PIRSF004803 2 556 5.2E-219 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Pfam PF00753 Metallo-beta-lactamase superfamily 18 167 1.6E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 554 1.9E-203 T 11-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Hamap MF_01491 Ribonuclease J [rnj]. 4 556 44.835 T 11-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Gene3D G3DSA:3.10.20.580 450 556 2.9E-38 T 11-10-2018 ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 SUPERFAMILY SSF56281 9 425 9.11E-87 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008240 bbb1ea4017338ba5b18b4a62aa1dfde0 556 Gene3D G3DSA:3.60.15.10 10 437 2.4E-169 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_018025 d396b64fc32dade2a75ff4e1cf397908 445 Pfam PF01554 MatE 240 392 5.0E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_018025 d396b64fc32dade2a75ff4e1cf397908 445 Pfam PF01554 MatE 12 172 5.3E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_018025 d396b64fc32dade2a75ff4e1cf397908 445 TIGRFAM TIGR00797 matE: MATE efflux family protein 12 405 2.9E-73 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 Gene3D G3DSA:1.10.1040.10 207 381 1.9E-51 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 152 368 3.2E-38 T 11-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 PRINTS PR00084 Mannitol dehydrogenase signature 169 184 9.0E-7 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.0E-7 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 9.0E-7 T 11-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 SUPERFAMILY SSF51735 1 190 1.46E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 SUPERFAMILY SSF48179 204 371 8.5E-38 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 34.372 T 11-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 4.6E-22 T 11-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_013505 38396dbeff3ae0744a66a7e41f5dd687 393 Gene3D G3DSA:3.40.50.720 1 205 6.5E-57 T 11-10-2018 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 SUPERFAMILY SSF52172 3 117 3.98E-7 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 SMART SM00342 400 483 1.5E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 Pfam PF12833 Helix-turn-helix domain 407 483 2.9E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 437 479 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 Gene3D G3DSA:3.40.50.2300 1 124 1.5E-5 T 11-10-2018 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 SUPERFAMILY SSF46689 436 485 1.12E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_010520 5e0841538d0eca77f941eb9b48efd10d 490 Gene3D G3DSA:1.10.10.60 381 487 8.9E-28 T 11-10-2018 ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 Gene3D G3DSA:3.40.50.10330 6 124 5.8E-93 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 SMART SM00046 3 131 4.4E-15 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.7E-111 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 Gene3D G3DSA:2.60.200.40 125 279 5.8E-93 T 11-10-2018 ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 127 6.7E-38 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_002020 4a03fa3b09f3bbbe09121080ff14503d 304 SUPERFAMILY SSF111331 1 295 2.29E-85 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_004240 b8bbfe868561b02c509ad8875e805612 326 SUPERFAMILY SSF161098 91 308 1.31E-18 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_004240 b8bbfe868561b02c509ad8875e805612 326 Gene3D G3DSA:1.10.3720.10 85 316 5.4E-21 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_004240 b8bbfe868561b02c509ad8875e805612 326 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 320 5.8E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 SUPERFAMILY SSF111038 2 129 4.32E-45 T 11-10-2018 IPR035917 YjbQ-like superfamily ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 130 3.0E-52 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 Pfam PF01894 Uncharacterised protein family UPF0047 17 129 1.6E-37 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 Gene3D G3DSA:2.60.120.460 1 131 2.0E-51 T 11-10-2018 IPR035917 YjbQ-like superfamily ABE28_012945 c444817172b2e34ddc0faa5fa8df7af3 134 PIRSF PIRSF004681 1 132 6.8E-37 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 Pfam PF04439 Streptomycin adenylyltransferase 2 277 2.1E-122 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 SUPERFAMILY SSF81631 137 278 2.67E-54 T 11-10-2018 ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 Gene3D G3DSA:3.30.460.10 9 148 5.3E-57 T 11-10-2018 ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 PIRSF PIRSF000812 1 284 9.8E-110 T 11-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 SUPERFAMILY SSF81301 1 134 4.25E-46 T 11-10-2018 ABE28_010440 1e9a5a349dd4ecf20870f4012835fc03 285 Gene3D G3DSA:1.20.120.330 149 285 7.7E-47 T 11-10-2018 ABE28_012650 efc64e3a192de6690516e7910d493f31 202 Pfam PF01613 Flavin reductase like domain 23 169 8.5E-21 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABE28_012650 efc64e3a192de6690516e7910d493f31 202 SUPERFAMILY SSF50475 3 199 3.68E-44 T 11-10-2018 ABE28_012650 efc64e3a192de6690516e7910d493f31 202 Gene3D G3DSA:2.30.110.10 1 202 7.9E-63 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABE28_012650 efc64e3a192de6690516e7910d493f31 202 SMART SM00903 20 176 6.8E-27 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 SUPERFAMILY SSF56801 24 534 4.84E-156 T 11-10-2018 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Pfam PF00501 AMP-binding enzyme 30 438 1.1E-110 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Gene3D G3DSA:3.40.50.980 51 205 1.2E-130 T 11-10-2018 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Gene3D G3DSA:3.40.50.980 47 353 1.2E-130 T 11-10-2018 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Gene3D G3DSA:2.30.38.10 354 432 1.2E-130 T 11-10-2018 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Gene3D G3DSA:3.30.300.310 435 536 2.9E-33 T 11-10-2018 ABE28_006835 4d95b239255a5ba721f2d03baf9b2e6c 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 449 523 4.6E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 Gene3D G3DSA:3.40.50.1820 2 233 3.4E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 71 1.8E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 175 189 1.8E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 PRINTS PR00111 Alpha/beta hydrolase fold signature 72 85 1.8E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 Pfam PF12697 Alpha/beta hydrolase family 27 223 1.3E-8 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019230 4438bcdb7ebb5a3d7ac8cace57cfb432 235 SUPERFAMILY SSF53474 4 230 6.37E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_005715 dd00e9e642f6f40eba338e4750d27a78 179 Pfam PF11667 Putative zincin peptidase 59 161 8.3E-19 T 11-10-2018 IPR021683 Putative zincin peptidase ABE28_006740 9317ef89770ab6a22b5394eab8e71a4e 434 SUPERFAMILY SSF103473 21 429 7.85E-45 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006740 9317ef89770ab6a22b5394eab8e71a4e 434 Pfam PF11700 Vacuole effluxer Atg22 like 165 425 2.5E-33 T 11-10-2018 IPR024671 Autophagy-related protein 22-like ABE28_006740 9317ef89770ab6a22b5394eab8e71a4e 434 ProSitePatterns PS00217 Sugar transport proteins signature 2. 344 369 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_006740 9317ef89770ab6a22b5394eab8e71a4e 434 Gene3D G3DSA:1.20.1250.20 235 432 8.2E-21 T 11-10-2018 ABE28_006740 9317ef89770ab6a22b5394eab8e71a4e 434 Gene3D G3DSA:1.20.1250.20 16 226 6.0E-12 T 11-10-2018 ABE28_008840 201e7421ddefe336ab9f143cb87bff25 350 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 14 95 3.3E-19 T 11-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family ABE28_008840 201e7421ddefe336ab9f143cb87bff25 350 Pfam PF10543 ORF6N domain 123 200 5.6E-17 T 11-10-2018 IPR018873 KilA-N, DNA-binding domain ABE28_008840 201e7421ddefe336ab9f143cb87bff25 350 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 4 98 7.6E-28 T 11-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family ABE28_008840 201e7421ddefe336ab9f143cb87bff25 350 Pfam PF03374 Phage antirepressor protein KilAC domain 247 346 5.5E-25 T 11-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.557 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 1 288 4.7E-165 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 2.9E-146 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 SUPERFAMILY SSF55681 1 280 1.14E-130 T 11-10-2018 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 2.9E-67 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 Gene3D G3DSA:1.20.58.180 205 285 9.5E-36 T 11-10-2018 ABE28_015395 8b94fae85b2abeb26328882de9e66231 298 Gene3D G3DSA:3.30.930.10 1 204 8.0E-107 T 11-10-2018 ABE28_010835 c80a1ecfb8472f728b32b0c5381cb21d 408 Gene3D G3DSA:3.40.50.12170 32 407 6.5E-156 T 11-10-2018 ABE28_010835 c80a1ecfb8472f728b32b0c5381cb21d 408 PIRSF PIRSF016719 1 408 1.4E-176 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 ABE28_010835 c80a1ecfb8472f728b32b0c5381cb21d 408 Pfam PF07075 Protein of unknown function (DUF1343) 50 407 2.1E-147 T 11-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 ABE28_010835 c80a1ecfb8472f728b32b0c5381cb21d 408 Gene3D G3DSA:3.90.1150.140 245 392 6.5E-156 T 11-10-2018 ABE28_016775 52e452c671f9a9a87942b8aeceac63cc 258 Pfam PF11181 Heat induced stress protein YflT 6 107 5.5E-15 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 8 411 3.1E-126 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 SUPERFAMILY SSF48179 208 300 1.41E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 PIRSF PIRSF500136 2 430 3.9E-148 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 318 415 1.8E-21 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 Gene3D G3DSA:3.40.50.720 207 427 1.4E-60 T 11-10-2018 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 Gene3D G3DSA:3.40.50.720 2 206 2.2E-65 T 11-10-2018 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 PIRSF PIRSF000124 8 429 2.3E-81 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 SUPERFAMILY SSF51735 9 202 1.14E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 SMART SM00984 318 416 3.6E-27 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 SUPERFAMILY SSF52413 305 416 9.94E-27 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 9 190 9.0E-56 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_015875 63a33d4c3c9b2296d7cd51dfd8f08162 431 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 208 295 5.2E-26 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 ABE28_011745 af9ca2226a3954af2c5082e00521ce51 293 SUPERFAMILY SSF82689 171 279 2.62E-5 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 ABE28_011745 af9ca2226a3954af2c5082e00521ce51 293 Pfam PF00924 Mechanosensitive ion channel 66 272 2.0E-29 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 ABE28_011745 af9ca2226a3954af2c5082e00521ce51 293 SUPERFAMILY SSF82861 21 104 1.57E-9 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 ABE28_011745 af9ca2226a3954af2c5082e00521ce51 293 SUPERFAMILY SSF50182 106 169 1.86E-9 T 11-10-2018 IPR010920 LSM domain superfamily ABE28_011745 af9ca2226a3954af2c5082e00521ce51 293 Gene3D G3DSA:2.30.30.60 121 171 5.0E-16 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 Pfam PF07690 Major Facilitator Superfamily 13 404 2.3E-56 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 476 4.5E-125 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 Gene3D G3DSA:1.20.1720.10 9 217 7.0E-40 T 11-10-2018 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 SUPERFAMILY SSF103473 5 480 3.79E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 12 36 3.9E-12 T 11-10-2018 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 297 321 3.9E-12 T 11-10-2018 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 103 123 3.9E-12 T 11-10-2018 ABE28_018395 c6a75056aa5b0ab911c6ceb0417571a6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 3.9E-12 T 11-10-2018 ABE28_000145 87bd5d2991a86a501fa7b66c44e899c9 247 Gene3D G3DSA:3.40.50.150 8 247 8.2E-72 T 11-10-2018 ABE28_000145 87bd5d2991a86a501fa7b66c44e899c9 247 Pfam PF05175 Methyltransferase small domain 18 126 1.6E-11 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABE28_000145 87bd5d2991a86a501fa7b66c44e899c9 247 SUPERFAMILY SSF53335 10 215 2.37E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_002985 e54eace08ffa86f0fa28304b4e9893ca 340 SUPERFAMILY SSF51679 5 323 4.32E-62 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_002985 e54eace08ffa86f0fa28304b4e9893ca 340 Gene3D G3DSA:3.20.20.30 2 328 5.5E-80 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_002985 e54eace08ffa86f0fa28304b4e9893ca 340 Pfam PF00296 Luciferase-like monooxygenase 19 297 1.9E-28 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_002985 e54eace08ffa86f0fa28304b4e9893ca 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 5 324 2.1E-106 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 Gene3D G3DSA:2.40.290.10 2 173 2.9E-20 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 174 1.0E-39 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 257 6.6E-95 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 SUPERFAMILY SSF100939 2 260 2.75E-54 T 11-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 PIRSF PIRSF006493 1 280 1.1E-103 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 255 33.193 T 11-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type ABE28_013005 8703195d9f4bebc6f1d347edbd231d44 280 SMART SM00559 52 181 1.3E-47 T 11-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 ABE28_002850 5f0cb31d307f599bcfefad186e2692f2 359 Gene3D G3DSA:3.40.190.10 46 319 1.3E-87 T 11-10-2018 ABE28_002850 5f0cb31d307f599bcfefad186e2692f2 359 Pfam PF13343 Bacterial extracellular solute-binding protein 90 318 4.0E-34 T 11-10-2018 ABE28_002850 5f0cb31d307f599bcfefad186e2692f2 359 SUPERFAMILY SSF53850 43 348 3.86E-72 T 11-10-2018 ABE28_002850 5f0cb31d307f599bcfefad186e2692f2 359 PIRSF PIRSF002825 3 351 1.4E-73 T 11-10-2018 IPR026045 Ferric binding protein ABE28_002850 5f0cb31d307f599bcfefad186e2692f2 359 Gene3D G3DSA:3.40.190.10 144 333 1.3E-87 T 11-10-2018 ABE28_002350 3ef354130d76d43359b221030747ad9b 383 Gene3D G3DSA:3.30.565.10 255 372 3.3E-21 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_002350 3ef354130d76d43359b221030747ad9b 383 Pfam PF07730 Histidine kinase 181 244 3.2E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ABE28_002350 3ef354130d76d43359b221030747ad9b 383 SUPERFAMILY SSF55874 251 372 1.78E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:3.30.56.10 411 483 7.9E-26 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Pfam PF01588 Putative tRNA binding domain 46 152 1.6E-28 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:2.40.50.140 40 161 4.0E-69 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:3.30.70.380 711 803 1.3E-31 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SMART SM00873 221 394 1.5E-91 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SUPERFAMILY SSF46955 411 483 8.61E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:3.50.40.10 204 404 3.0E-83 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:3.30.930.10 495 699 7.2E-63 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 5.8E-30 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SMART SM00874 411 479 4.1E-28 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SUPERFAMILY SSF56037 209 403 5.49E-71 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SMART SM00896 710 803 9.0E-45 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Pfam PF03483 B3/4 domain 222 394 3.3E-67 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Gene3D G3DSA:3.30.56.10 4 189 4.0E-69 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SUPERFAMILY SSF50249 40 197 3.43E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SUPERFAMILY SSF54991 705 803 1.31E-31 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 1.8E-275 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 SUPERFAMILY SSF55681 475 697 7.95E-51 T 11-10-2018 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 1.4E-18 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABE28_016750 4fd9a40fbf3daf7058ae19421bc96980 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 47.253 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 1.1E-103 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 Gene3D G3DSA:3.40.1160.10 1 239 2.1E-81 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 45.197 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 PIRSF PIRSF005650 1 240 7.3E-100 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 SUPERFAMILY SSF53633 5 238 3.01E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_008105 e5d403a37e52ecf33db1757f8bd70943 240 Pfam PF00696 Amino acid kinase family 7 217 5.3E-29 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_022260 64d70041ea2da88716df582add45ce08 219 Gene3D G3DSA:2.40.260.10 40 219 1.0E-43 T 11-10-2018 IPR023365 Sortase domain superfamily ABE28_022260 64d70041ea2da88716df582add45ce08 219 TIGRFAM TIGR01076 sortase_fam: sortase 90 208 2.0E-31 T 11-10-2018 IPR005754 Sortase family ABE28_022260 64d70041ea2da88716df582add45ce08 219 Pfam PF04203 Sortase family 92 212 4.9E-28 T 11-10-2018 IPR005754 Sortase family ABE28_022260 64d70041ea2da88716df582add45ce08 219 SUPERFAMILY SSF63817 79 215 1.44E-36 T 11-10-2018 IPR023365 Sortase domain superfamily ABE28_009185 61ed1d1f04149f2fd3023fcc9e4dc8e0 286 SUPERFAMILY SSF53098 119 278 2.12E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_009185 61ed1d1f04149f2fd3023fcc9e4dc8e0 286 Gene3D G3DSA:3.30.420.10 120 279 7.6E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_009185 61ed1d1f04149f2fd3023fcc9e4dc8e0 286 Pfam PF00665 Integrase core domain 124 238 1.3E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_009185 61ed1d1f04149f2fd3023fcc9e4dc8e0 286 Pfam PF13276 HTH-like domain 42 94 7.1E-10 T 11-10-2018 IPR025948 HTH-like domain ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 SMART SM00382 27 224 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 SMART SM00382 276 470 6.0E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 ProSitePatterns PS00211 ABC transporters family signature. 394 408 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 Pfam PF00005 ABC transporter 268 421 1.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 SUPERFAMILY SSF52540 3 219 6.39E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 Gene3D G3DSA:3.40.50.300 241 489 1.6E-44 T 11-10-2018 ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 Gene3D G3DSA:3.40.50.300 1 236 1.1E-59 T 11-10-2018 ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 Pfam PF00005 ABC transporter 18 168 1.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 SUPERFAMILY SSF52540 241 472 2.87E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023540 f91af03c4c4fe837f72f4ad5143c6148 493 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_016045 a802f2051287c55f0f18d1b61210d66d 254 PIRSF PIRSF016557 1 254 1.3E-96 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 ABE28_016045 a802f2051287c55f0f18d1b61210d66d 254 Gene3D G3DSA:3.20.20.140 1 254 1.8E-88 T 11-10-2018 ABE28_016045 a802f2051287c55f0f18d1b61210d66d 254 SUPERFAMILY SSF89550 2 218 7.45E-13 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 2 27 6.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 400 427 6.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 429 458 6.4E-17 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 Gene3D G3DSA:1.10.287.950 275 577 5.0E-63 T 11-10-2018 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 374 530 6.6E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 Gene3D G3DSA:1.20.1480.50 176 274 2.9E-7 T 11-10-2018 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 SMART SM00283 302 577 5.4E-63 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 SUPERFAMILY SSF58104 245 576 9.68E-66 T 11-10-2018 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 Pfam PF00672 HAMP domain 218 267 2.3E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_010210 c2bab214e8609ff0360362cf13f602d5 578 SUPERFAMILY SSF103190 75 181 9.42E-5 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 SUPERFAMILY SSF54570 3 84 1.96E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 Gene3D G3DSA:3.30.860.10 1 92 7.1E-41 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 8.2E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.407 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 PIRSF PIRSF002144 1 92 5.3E-32 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 5.9E-48 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABE28_000605 8764ad1b53f64ad8d955198e1850e146 92 Pfam PF00203 Ribosomal protein S19 3 83 1.0E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_003605 35e461350640d658200f9174ae4b6159 103 Gene3D G3DSA:1.10.287.880 1 51 2.8E-24 T 11-10-2018 ABE28_003605 35e461350640d658200f9174ae4b6159 103 Pfam PF08838 Protein of unknown function (DUF1811) 5 103 1.9E-44 T 11-10-2018 IPR014938 Protein of unknown function DUF1811 ABE28_003605 35e461350640d658200f9174ae4b6159 103 SUPERFAMILY SSF101697 3 103 4.32E-45 T 11-10-2018 IPR036289 Hypothetical protein YfhH ABE28_003605 35e461350640d658200f9174ae4b6159 103 Gene3D G3DSA:2.30.30.340 52 103 8.9E-28 T 11-10-2018 ABE28_002260 5b2cedfbaa8a655b9d70b4b1e843eb2d 322 SUPERFAMILY SSF51658 2 311 1.07E-51 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_002260 5b2cedfbaa8a655b9d70b4b1e843eb2d 322 Pfam PF07582 AP endonuclease family 2 C terminus 268 322 3.9E-22 T 11-10-2018 IPR011418 AP endonuclease, family 2, C-terminal ABE28_002260 5b2cedfbaa8a655b9d70b4b1e843eb2d 322 Pfam PF01261 Xylose isomerase-like TIM barrel 19 249 4.7E-31 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_002260 5b2cedfbaa8a655b9d70b4b1e843eb2d 322 Gene3D G3DSA:3.20.20.150 1 315 3.1E-70 T 11-10-2018 ABE28_016455 8e2c453930244be251fe5fb3191067d5 265 SUPERFAMILY SSF69618 11 251 1.83E-63 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016455 8e2c453930244be251fe5fb3191067d5 265 Pfam PF02602 Uroporphyrinogen-III synthase HemD 26 248 1.6E-59 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_016455 8e2c453930244be251fe5fb3191067d5 265 Gene3D G3DSA:3.40.50.10090 10 127 1.5E-24 T 11-10-2018 ABE28_016455 8e2c453930244be251fe5fb3191067d5 265 Gene3D G3DSA:3.40.50.10090 128 252 4.8E-22 T 11-10-2018 ABE28_005665 f908719aa5bddd47c19cfa64eb2cccab 274 SUPERFAMILY SSF52540 3 230 8.74E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005665 f908719aa5bddd47c19cfa64eb2cccab 274 Gene3D G3DSA:3.40.50.300 1 249 2.4E-67 T 11-10-2018 ABE28_005665 f908719aa5bddd47c19cfa64eb2cccab 274 SMART SM00382 29 218 7.9E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005665 f908719aa5bddd47c19cfa64eb2cccab 274 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_005665 f908719aa5bddd47c19cfa64eb2cccab 274 Pfam PF00005 ABC transporter 21 168 2.3E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 Pfam PF00171 Aldehyde dehydrogenase family 7 470 1.8E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 Gene3D G3DSA:3.40.605.10 3 468 2.3E-176 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 SUPERFAMILY SSF53720 1 474 7.98E-165 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_004130 31179153506d4d9f59c4d6395a5af9c4 486 Gene3D G3DSA:3.40.309.10 249 440 2.3E-176 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_000425 33f1423a8018c781e314ff3983d29b49 153 Gene3D G3DSA:1.10.1200.150 73 153 1.9E-30 T 11-10-2018 ABE28_000425 33f1423a8018c781e314ff3983d29b49 153 Gene3D G3DSA:1.10.10.1240 2 72 2.4E-35 T 11-10-2018 ABE28_000425 33f1423a8018c781e314ff3983d29b49 153 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 6.4E-57 T 11-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 ABE28_000425 33f1423a8018c781e314ff3983d29b49 153 PIRSF PIRSF010607 1 153 4.2E-64 T 11-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 ABE28_017865 edf8ebb09810abec774d58551beac995 693 Gene3D G3DSA:1.10.287.950 389 690 1.6E-56 T 11-10-2018 ABE28_017865 edf8ebb09810abec774d58551beac995 693 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 465 643 3.6E-32 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_017865 edf8ebb09810abec774d58551beac995 693 Gene3D G3DSA:1.20.1480.50 298 388 4.6E-9 T 11-10-2018 ABE28_017865 edf8ebb09810abec774d58551beac995 693 SMART SM00283 415 690 3.5E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_017865 edf8ebb09810abec774d58551beac995 693 Gene3D G3DSA:3.30.450.20 50 197 1.9E-13 T 11-10-2018 ABE28_017865 edf8ebb09810abec774d58551beac995 693 SMART SM00304 334 386 3.0E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_017865 edf8ebb09810abec774d58551beac995 693 Pfam PF02743 Cache domain 50 295 1.1E-23 T 11-10-2018 IPR033479 Double Cache domain 1 ABE28_017865 edf8ebb09810abec774d58551beac995 693 SUPERFAMILY SSF58104 354 689 9.55E-63 T 11-10-2018 ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 SUPERFAMILY SSF102114 36 340 4.58E-30 T 11-10-2018 ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 Pfam PF08756 YfkB-like domain 223 372 2.1E-75 T 11-10-2018 IPR014866 YfkB-like domain ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 Pfam PF13353 4Fe-4S single cluster domain 43 137 6.3E-7 T 11-10-2018 ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 Gene3D G3DSA:3.20.20.70 26 307 9.1E-23 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 Pfam PF04055 Radical SAM superfamily 39 177 2.4E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_002745 90b2539cc478ea82ec28f62965b024b0 375 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 11 372 1.0E-194 T 11-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB ABE28_017205 ddb9cff2cbd8497c253cb32a597fa384 309 TIGRFAM TIGR00688 rarD: protein RarD 8 264 5.7E-78 T 11-10-2018 IPR004626 RarD protein GO:0005887 ABE28_017205 ddb9cff2cbd8497c253cb32a597fa384 309 SUPERFAMILY SSF103481 196 288 2.48E-8 T 11-10-2018 ABE28_017205 ddb9cff2cbd8497c253cb32a597fa384 309 SUPERFAMILY SSF103481 42 148 7.32E-11 T 11-10-2018 ABE28_017205 ddb9cff2cbd8497c253cb32a597fa384 309 Pfam PF00892 EamA-like transporter family 9 147 6.1E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_017205 ddb9cff2cbd8497c253cb32a597fa384 309 Pfam PF00892 EamA-like transporter family 159 285 1.1E-7 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019710 f5d1ec83c26c38c030de3ccdfc0a327b 158 Pfam PF07486 Cell Wall Hydrolase 25 146 1.8E-13 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 ABE28_019710 f5d1ec83c26c38c030de3ccdfc0a327b 158 Gene3D G3DSA:1.10.10.2520 9 100 7.0E-13 T 11-10-2018 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 SUPERFAMILY SSF46894 132 229 4.25E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 SUPERFAMILY SSF52172 3 128 4.41E-35 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 Gene3D G3DSA:3.40.50.2300 1 129 6.0E-30 T 11-10-2018 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 1.6E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 SMART SM00448 4 115 1.4E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 SMART SM00862 152 228 4.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 Gene3D G3DSA:1.10.10.10 130 235 4.7E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003370 0443084349f87491f1703cfaf15d1de3 235 Pfam PF00072 Response regulator receiver domain 6 115 3.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_002245 bdf8fc7627ea33c2a844f628b491a30e 242 PIRSF PIRSF030013 1 239 7.4E-127 T 11-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote ABE28_002245 bdf8fc7627ea33c2a844f628b491a30e 242 SUPERFAMILY SSF52317 1 220 2.17E-64 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_002245 bdf8fc7627ea33c2a844f628b491a30e 242 Gene3D G3DSA:3.40.50.880 1 242 5.4E-115 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_002245 bdf8fc7627ea33c2a844f628b491a30e 242 Pfam PF06283 Trehalose utilisation 2 217 7.4E-37 T 11-10-2018 IPR029010 ThuA-like domain ABE28_012065 f24e8358e4634343e55240a3874bd333 258 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 SUPERFAMILY SSF53790 1 248 5.63E-84 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 Gene3D G3DSA:3.40.1010.10 1 117 3.1E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 Gene3D G3DSA:3.30.950.10 118 258 6.1E-51 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 213 1.3E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABE28_012065 f24e8358e4634343e55240a3874bd333 258 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 3.4E-101 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 Pfam PF00990 Diguanylate cyclase, GGDEF domain 470 617 5.0E-41 T 11-10-2018 IPR000160 GGDEF domain ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 SUPERFAMILY SSF55781 166 320 2.4E-15 T 11-10-2018 ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 Gene3D G3DSA:3.30.450.40 311 463 4.0E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 Gene3D G3DSA:3.30.450.40 168 309 7.5E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 SUPERFAMILY SSF55781 310 465 2.18E-11 T 11-10-2018 ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 Gene3D G3DSA:3.30.70.270 464 622 2.8E-47 T 11-10-2018 ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 SUPERFAMILY SSF55073 474 620 3.37E-40 T 11-10-2018 IPR029787 Nucleotide cyclase ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 465 620 1.8E-41 T 11-10-2018 IPR000160 GGDEF domain ABE28_017260 b9ce99b70bf4d1d283a6d99a1741af81 625 SMART SM00267 458 621 2.7E-58 T 11-10-2018 IPR000160 GGDEF domain ABE28_018405 6f0517c4945245d135106dcd38960605 457 Gene3D G3DSA:1.20.1740.10 9 455 4.8E-49 T 11-10-2018 ABE28_018405 6f0517c4945245d135106dcd38960605 457 Pfam PF00324 Amino acid permease 19 391 1.4E-46 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_018405 6f0517c4945245d135106dcd38960605 457 PIRSF PIRSF006060 1 457 4.3E-53 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_021625 e04b4d4d90ac4276964d8381cf0e9ca3 159 Pfam PF03734 L,D-transpeptidase catalytic domain 14 148 6.7E-9 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 Pfam PF03315 Serine dehydratase beta chain 5 74 1.0E-10 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 SUPERFAMILY SSF143548 19 136 5.23E-32 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 SUPERFAMILY SSF55021 138 215 3.02E-16 T 11-10-2018 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 PIRSF PIRSF036692 1 220 8.9E-102 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 Gene3D G3DSA:3.30.70.260 139 216 3.2E-15 T 11-10-2018 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 205 2.9E-90 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 Pfam PF01842 ACT domain 149 210 1.5E-9 T 11-10-2018 IPR002912 ACT domain ABE28_020095 4b85f7cdb1bb143dd9f9f4a0d87704c1 220 Gene3D G3DSA:3.30.1330.90 13 137 4.1E-21 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_000735 7b52b9ae3fcb741c3cf3a219cd4602e8 265 Hamap MF_01461 Energy-coupling factor transporter transmembrane protein EcfT [ecfT]. 2 265 38.089 T 11-10-2018 IPR024919 ECF transporter transmembrane protein EcfT GO:0016021|GO:0022857|GO:0055085 ABE28_000735 7b52b9ae3fcb741c3cf3a219cd4602e8 265 Pfam PF02361 Cobalt transport protein 14 237 8.0E-60 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ABE28_000735 7b52b9ae3fcb741c3cf3a219cd4602e8 265 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 20 226 3.7E-33 T 11-10-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 ABE28_020450 1ce08eda69003ccabaf024d3d0430c66 415 Gene3D G3DSA:3.30.830.10 9 215 7.2E-35 T 11-10-2018 ABE28_020450 1ce08eda69003ccabaf024d3d0430c66 415 SUPERFAMILY SSF63411 259 402 2.83E-19 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_020450 1ce08eda69003ccabaf024d3d0430c66 415 Gene3D G3DSA:3.30.830.10 242 413 1.0E-25 T 11-10-2018 ABE28_020450 1ce08eda69003ccabaf024d3d0430c66 415 SUPERFAMILY SSF63411 31 215 1.3E-15 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_020450 1ce08eda69003ccabaf024d3d0430c66 415 Pfam PF05193 Peptidase M16 inactive domain 176 352 6.3E-18 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 SMART SM00861 4 179 3.6E-65 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 5.4E-41 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 Pfam PF02780 Transketolase, C-terminal domain 194 314 6.8E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 Gene3D G3DSA:3.40.50.970 1 192 3.1E-81 T 11-10-2018 ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 SUPERFAMILY SSF52922 188 324 1.02E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 SUPERFAMILY SSF52518 2 204 7.66E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_009775 1f3a1cdc8ec67dc7baeafa3eaa520780 325 Gene3D G3DSA:3.40.50.920 193 324 1.3E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 SUPERFAMILY SSF54821 107 205 1.44E-38 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 1.3E-39 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 SMART SM00322 59 124 2.0E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 Gene3D G3DSA:3.30.300.20 17 106 2.8E-31 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 SUPERFAMILY SSF54814 2 105 4.45E-38 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 Pfam PF07650 KH domain 37 109 3.1E-20 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.5E-95 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.358 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 ABE28_000615 689e9b5e11704b42d60bf96c65e6a2bf 218 Gene3D G3DSA:3.30.1140.32 107 207 2.2E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_005300 0cdf58b17000db0dd1a16401733614a7 138 Gene3D G3DSA:1.10.10.10 1 138 9.8E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005300 0cdf58b17000db0dd1a16401733614a7 138 SMART SM00347 23 122 2.2E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_005300 0cdf58b17000db0dd1a16401733614a7 138 SUPERFAMILY SSF46785 4 137 3.13E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016155 f1bea382bd956dd6977f56f1372097b4 147 SUPERFAMILY SSF69500 1 144 9.29E-59 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ABE28_016155 f1bea382bd956dd6977f56f1372097b4 147 Gene3D G3DSA:3.50.80.10 1 147 1.1E-58 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily ABE28_016155 f1bea382bd956dd6977f56f1372097b4 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 1.9E-61 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABE28_016155 f1bea382bd956dd6977f56f1372097b4 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.6E-57 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABE28_016155 f1bea382bd956dd6977f56f1372097b4 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.305 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 ABE28_001270 42b379c1e0981c41db5596c5c32b0e96 258 Pfam PF12146 Serine aminopeptidase, S33 22 223 2.4E-24 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ABE28_001270 42b379c1e0981c41db5596c5c32b0e96 258 SUPERFAMILY SSF53474 18 245 5.72E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001270 42b379c1e0981c41db5596c5c32b0e96 258 Gene3D G3DSA:3.40.50.1820 2 246 1.8E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001270 42b379c1e0981c41db5596c5c32b0e96 258 PIRSF PIRSF017388 4 246 9.7E-62 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 ABE28_008595 29e0697d006c38b20b2b4841d44f75b8 292 Gene3D G3DSA:3.30.200.180 56 289 1.4E-78 T 11-10-2018 ABE28_008595 29e0697d006c38b20b2b4841d44f75b8 292 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 104 219 6.9E-30 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ABE28_008595 29e0697d006c38b20b2b4841d44f75b8 292 SUPERFAMILY SSF55166 100 228 4.71E-29 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_008595 29e0697d006c38b20b2b4841d44f75b8 292 Gene3D G3DSA:3.30.1380.10 74 217 1.4E-78 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_019370 bd1e37c14ed26003a193d2036059bd57 230 SUPERFAMILY SSF51366 6 228 8.48E-54 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_019370 bd1e37c14ed26003a193d2036059bd57 230 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 229 39.27 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ABE28_019370 bd1e37c14ed26003a193d2036059bd57 230 Gene3D G3DSA:3.20.20.70 1 230 3.6E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_019370 bd1e37c14ed26003a193d2036059bd57 230 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 229 7.3E-64 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 SUPERFAMILY SSF52833 3 180 4.99E-61 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 Gene3D G3DSA:3.40.30.10 1 180 3.8E-72 T 11-10-2018 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 Pfam PF00255 Glutathione peroxidase 3 109 1.2E-44 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 11-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 PIRSF PIRSF000303 2 180 1.9E-65 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 PRINTS PR01011 Glutathione peroxidase family signature 144 153 2.0E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 PRINTS PR01011 Glutathione peroxidase family signature 56 72 2.0E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 PRINTS PR01011 Glutathione peroxidase family signature 21 38 2.0E-20 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_005440 4e8393b9fa3ad9c0e48b3d55ed41e21d 180 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Pfam PF16326 ABC transporter C-terminal domain 554 620 7.6E-11 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Gene3D G3DSA:3.40.50.300 2 281 6.3E-70 T 11-10-2018 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Gene3D G3DSA:3.40.50.300 282 555 1.6E-61 T 11-10-2018 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Pfam PF00005 ABC transporter 20 187 2.8E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Pfam PF00005 ABC transporter 337 470 1.6E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 SUPERFAMILY SSF52540 314 529 1.64E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 Pfam PF12848 ABC transporter 226 305 4.9E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 SMART SM00382 28 239 9.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 SMART SM00382 344 514 2.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_013435 05d4d8e64ead2c9151fd551b7c975178 625 SUPERFAMILY SSF52540 6 240 3.23E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012690 47fae4b1d11d5efda71e553b996b8078 151 Pfam PF02566 OsmC-like protein 39 141 6.2E-18 T 11-10-2018 IPR003718 OsmC/Ohr family ABE28_012690 47fae4b1d11d5efda71e553b996b8078 151 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 2.5E-67 T 11-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes ABE28_012690 47fae4b1d11d5efda71e553b996b8078 151 Gene3D G3DSA:3.30.300.20 5 146 1.8E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_012690 47fae4b1d11d5efda71e553b996b8078 151 SUPERFAMILY SSF82784 3 141 3.66E-31 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 5.7E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 Gene3D G3DSA:1.10.10.10 132 228 1.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 SUPERFAMILY SSF46894 128 228 5.95E-30 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 Gene3D G3DSA:3.40.50.2300 2 131 3.6E-41 T 11-10-2018 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 Pfam PF00072 Response regulator receiver domain 5 113 6.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 SMART SM00862 152 228 1.1E-26 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 SMART SM00448 3 113 2.2E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_009435 5165713f63a749ccc735c709c3ed6b2a 228 SUPERFAMILY SSF52172 4 125 3.27E-44 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_008320 6021ab41401268fac80ccde660a49353 194 PIRSF PIRSF000847 1 194 8.1E-50 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABE28_008320 6021ab41401268fac80ccde660a49353 194 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 190 7.4E-61 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 ABE28_008320 6021ab41401268fac80ccde660a49353 194 Pfam PF01066 CDP-alcohol phosphatidyltransferase 2 81 8.8E-18 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABE28_008320 6021ab41401268fac80ccde660a49353 194 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABE28_008320 6021ab41401268fac80ccde660a49353 194 Gene3D G3DSA:1.20.120.1760 3 191 1.6E-10 T 11-10-2018 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 Gene3D G3DSA:1.10.10.60 79 130 6.9E-16 T 11-10-2018 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 SUPERFAMILY SSF57884 8 85 1.83E-28 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 SUPERFAMILY SSF46689 81 131 2.06E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 134 176 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 PIRSF PIRSF000408 1 188 6.8E-73 T 11-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 Pfam PF12833 Helix-turn-helix domain 104 181 1.1E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 Gene3D G3DSA:1.10.10.60 131 188 3.0E-19 T 11-10-2018 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 Pfam PF02805 Metal binding domain of Ada 10 73 2.2E-29 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 Gene3D G3DSA:3.40.10.10 7 75 2.3E-29 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 SUPERFAMILY SSF46689 133 183 1.25E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 SMART SM00342 97 180 2.8E-33 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 164 180 2.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_018120 bd70b0b051e95ea5481648d4e22f5373 192 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 149 164 2.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_017405 f09416a50716fcdb607a7b9f17ace09f 168 SUPERFAMILY SSF52972 1 162 3.75E-47 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_017405 f09416a50716fcdb607a7b9f17ace09f 168 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 5 152 7.7E-35 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase ABE28_017405 f09416a50716fcdb607a7b9f17ace09f 168 Pfam PF01931 Protein of unknown function DUF84 6 156 2.2E-46 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 ABE28_017405 f09416a50716fcdb607a7b9f17ace09f 168 Hamap MF_00648 Non-canonical purine NTP phosphatase. 1 164 27.148 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase ABE28_017405 f09416a50716fcdb607a7b9f17ace09f 168 Gene3D G3DSA:3.90.950.10 1 167 7.8E-51 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_020360 7db48d2b3f6863c3dbe45b394b1bd17b 273 Gene3D G3DSA:3.40.50.720 3 254 1.1E-64 T 11-10-2018 ABE28_020360 7db48d2b3f6863c3dbe45b394b1bd17b 273 SUPERFAMILY SSF51735 2 219 1.24E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020360 7db48d2b3f6863c3dbe45b394b1bd17b 273 Pfam PF05368 NmrA-like family 12 207 3.1E-15 T 11-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 ABE28_020360 7db48d2b3f6863c3dbe45b394b1bd17b 273 Gene3D G3DSA:3.90.25.10 123 255 1.1E-64 T 11-10-2018 ABE28_013990 a1b51a67accabb0b90ce5cb7f57f35fd 183 PIRSF PIRSF021290 1 179 1.5E-65 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 ABE28_013990 a1b51a67accabb0b90ce5cb7f57f35fd 183 Hamap MF_01575 UPF0398 protein . 1 177 33.626 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 ABE28_013990 a1b51a67accabb0b90ce5cb7f57f35fd 183 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 1.9E-63 T 11-10-2018 IPR010697 Protein of unknown function DUF1273 ABE28_013990 a1b51a67accabb0b90ce5cb7f57f35fd 183 SUPERFAMILY SSF102405 1 177 5.58E-58 T 11-10-2018 ABE28_013990 a1b51a67accabb0b90ce5cb7f57f35fd 183 Gene3D G3DSA:3.40.50.450 1 180 3.1E-62 T 11-10-2018 ABE28_015115 59ccb5c6f75561e5b249b2651d85fdad 136 PIRSF PIRSF021292 1 136 2.4E-29 T 11-10-2018 IPR016785 ComG operon protein 4 GO:0030420 ABE28_005100 b8895f023b62db8483c5a990f4e4b61d 119 Gene3D G3DSA:3.10.20.520 4 67 3.1E-13 T 11-10-2018 IPR038693 Phenylacetyl-CoA epoxidase, subunit B ABE28_005100 b8895f023b62db8483c5a990f4e4b61d 119 TIGRFAM TIGR02157 PA_CoA_Oxy2: phenylacetate-CoA oxygenase, PaaH subunit 9 96 2.9E-32 T 11-10-2018 IPR009359 Phenylacetic acid degradation B ABE28_005100 b8895f023b62db8483c5a990f4e4b61d 119 Pfam PF06243 Phenylacetic acid degradation B 9 95 1.4E-25 T 11-10-2018 IPR009359 Phenylacetic acid degradation B ABE28_017175 b8b9eef26ede7d15dc5e84e06a957a4f 256 PIRSF PIRSF005902 1 256 8.7E-48 T 11-10-2018 IPR001130 TatD family GO:0016788 ABE28_017175 b8b9eef26ede7d15dc5e84e06a957a4f 256 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 ABE28_017175 b8b9eef26ede7d15dc5e84e06a957a4f 256 SUPERFAMILY SSF51556 3 255 8.8E-50 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_017175 b8b9eef26ede7d15dc5e84e06a957a4f 256 Pfam PF01026 TatD related DNase 4 254 1.3E-44 T 11-10-2018 IPR001130 TatD family GO:0016788 ABE28_017175 b8b9eef26ede7d15dc5e84e06a957a4f 256 Gene3D G3DSA:3.20.20.140 1 256 3.0E-54 T 11-10-2018 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 384 1.6E-167 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Gene3D G3DSA:3.30.1490.20 21 104 1.3E-99 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Gene3D G3DSA:3.30.470.20 1 234 1.3E-99 T 11-10-2018 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 SUPERFAMILY SSF56059 1 238 1.67E-87 T 11-10-2018 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Pfam PF08442 ATP-grasp domain 2 203 1.9E-83 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.384 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Pfam PF00549 CoA-ligase 262 381 5.6E-26 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 SUPERFAMILY SSF52210 239 385 1.31E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 PIRSF PIRSF001554 1 386 2.5E-157 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 ABE28_007885 8e6a0d25280d959ef835bc4f5ca1157b 386 Gene3D G3DSA:3.40.50.261 240 386 5.6E-57 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 ABE28_016325 76618bc238e19131d35344ddbba4c008 179 SUPERFAMILY SSF55890 4 167 4.84E-34 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 ABE28_016325 76618bc238e19131d35344ddbba4c008 179 Gene3D G3DSA:1.10.287.130 1 57 9.1E-22 T 11-10-2018 ABE28_016325 76618bc238e19131d35344ddbba4c008 179 SMART SM01317 59 173 7.2E-4 T 11-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal ABE28_016325 76618bc238e19131d35344ddbba4c008 179 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 60 171 6.6E-17 T 11-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal ABE28_016325 76618bc238e19131d35344ddbba4c008 179 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 6 57 9.8E-18 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain ABE28_016325 76618bc238e19131d35344ddbba4c008 179 Gene3D G3DSA:3.30.565.30 58 176 4.5E-16 T 11-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 312 2.4E-70 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 PIRSF PIRSF036500 1 326 1.7E-196 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 SMART SM01240 3 327 8.1E-115 T 11-10-2018 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.287 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 9.8E-200 T 11-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 Gene3D G3DSA:3.20.20.70 1 327 3.1E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 SUPERFAMILY SSF51412 4 314 3.4E-91 T 11-10-2018 ABE28_017575 821391d3ed2cf93f9b6ef4d96be80b34 327 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 ABE28_000140 f1de40016231ecf6a32b8f0ad60ef85c 124 Hamap MF_01159 Initiation-control protein YabA. 1 123 24.722 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 ABE28_000140 f1de40016231ecf6a32b8f0ad60ef85c 124 Pfam PF06156 Initiation control protein YabA 2 119 9.7E-38 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 ABE28_000140 f1de40016231ecf6a32b8f0ad60ef85c 124 PIRSF PIRSF021439 1 124 1.8E-41 T 11-10-2018 IPR010377 Initiation control protein YabA GO:0006260 ABE28_006075 888bbb9c4b21a26e97b610b38cab3aee 240 SUPERFAMILY SSF53474 50 142 2.67E-8 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_006075 888bbb9c4b21a26e97b610b38cab3aee 240 Gene3D G3DSA:3.40.50.1820 15 214 8.4E-6 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 Gene3D G3DSA:3.40.640.10 62 284 1.3E-142 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 Gene3D G3DSA:3.90.1150.10 25 385 1.3E-142 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 Pfam PF00155 Aminotransferase class I and II 31 385 4.4E-84 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 7.2E-17 T 11-10-2018 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 7.2E-17 T 11-10-2018 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 7.2E-17 T 11-10-2018 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 7.2E-17 T 11-10-2018 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 7.2E-17 T 11-10-2018 ABE28_014110 c1dae899835ee1a9db0ab64717a63873 394 SUPERFAMILY SSF53383 1 389 1.6E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 78 163 2.9E-36 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 Gene3D G3DSA:3.10.20.80 1 73 5.0E-31 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 SUPERFAMILY SSF55200 77 165 2.35E-31 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 165 28.242 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 2 71 7.0E-30 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 SUPERFAMILY SSF54364 2 73 1.28E-27 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 Gene3D G3DSA:3.30.110.10 74 166 8.8E-36 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 ABE28_016865 1e57ed9826aba66ad8ca2349db95609a 166 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 2 164 6.6E-71 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 ABE28_012915 971a185b4d58105a83ddd1175282c68b 190 Pfam PF02632 BioY family 33 172 7.4E-36 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_012915 971a185b4d58105a83ddd1175282c68b 190 PIRSF PIRSF016661 1 180 2.6E-46 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_012915 971a185b4d58105a83ddd1175282c68b 190 Gene3D G3DSA:1.10.1760.20 1 180 3.7E-50 T 11-10-2018 ABE28_023940 971a185b4d58105a83ddd1175282c68b 190 Pfam PF02632 BioY family 33 172 7.4E-36 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_023940 971a185b4d58105a83ddd1175282c68b 190 PIRSF PIRSF016661 1 180 2.6E-46 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_023940 971a185b4d58105a83ddd1175282c68b 190 Gene3D G3DSA:1.10.1760.20 1 180 3.7E-50 T 11-10-2018 ABE28_006405 2a658f71935626cbdcd478790a429052 411 Gene3D G3DSA:1.20.1720.10 22 401 1.8E-100 T 11-10-2018 ABE28_006405 2a658f71935626cbdcd478790a429052 411 SUPERFAMILY SSF103473 15 403 9.94E-62 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006405 2a658f71935626cbdcd478790a429052 411 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 20 400 8.5E-103 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 ABE28_006405 2a658f71935626cbdcd478790a429052 411 PRINTS PR01035 Tetracycline resistance protein signature 32 48 3.5E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_006405 2a658f71935626cbdcd478790a429052 411 PRINTS PR01035 Tetracycline resistance protein signature 176 196 3.5E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_006405 2a658f71935626cbdcd478790a429052 411 PRINTS PR01035 Tetracycline resistance protein signature 116 137 3.5E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_006405 2a658f71935626cbdcd478790a429052 411 PRINTS PR01035 Tetracycline resistance protein signature 289 310 3.5E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_006405 2a658f71935626cbdcd478790a429052 411 PRINTS PR01035 Tetracycline resistance protein signature 89 113 3.5E-6 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_006405 2a658f71935626cbdcd478790a429052 411 Pfam PF07690 Major Facilitator Superfamily 31 367 3.7E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 Gene3D G3DSA:1.20.120.140 32 330 6.5E-116 T 11-10-2018 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 58 333 65.412 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 SMART SM00963 34 115 5.7E-28 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 Pfam PF02881 SRP54-type protein, helical bundle domain 45 111 3.4E-15 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 306 319 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 58 332 8.4E-117 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 SUPERFAMILY SSF52540 133 331 2.49E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 SUPERFAMILY SSF47364 29 108 3.53E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 SMART SM00962 132 333 2.5E-120 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 Pfam PF00448 SRP54-type protein, GTPase domain 133 332 4.6E-81 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 SMART SM00382 131 309 1.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_007810 ccda102773b818aaca52d48a54ce75be 341 Gene3D G3DSA:3.40.50.300 119 321 6.5E-116 T 11-10-2018 ABE28_005560 387c11eeedf180110480b9dc91e0e96a 271 Gene3D G3DSA:3.60.15.10 1 221 5.9E-30 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005560 387c11eeedf180110480b9dc91e0e96a 271 SUPERFAMILY SSF56281 7 244 1.9E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005560 387c11eeedf180110480b9dc91e0e96a 271 SMART SM00849 23 194 5.6E-21 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_005560 387c11eeedf180110480b9dc91e0e96a 271 Pfam PF00753 Metallo-beta-lactamase superfamily 33 168 1.3E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Gene3D G3DSA:1.10.357.20 279 455 6.8E-62 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SUPERFAMILY SSF158791 16 140 3.27E-30 T 11-10-2018 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Pfam PF01769 Divalent cation transporter 327 448 8.3E-32 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SUPERFAMILY SSF54631 142 279 3.66E-33 T 11-10-2018 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Pfam PF03448 MgtE intracellular N domain 38 140 1.3E-23 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Pfam PF00571 CBS domain 143 201 1.1E-7 T 11-10-2018 IPR000644 CBS domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Pfam PF00571 CBS domain 207 261 1.0E-9 T 11-10-2018 IPR000644 CBS domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SMART SM00116 214 262 1.2E-8 T 11-10-2018 IPR000644 CBS domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SMART SM00116 150 203 1.4 T 11-10-2018 IPR000644 CBS domain ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Gene3D G3DSA:3.10.580.10 139 267 6.1E-48 T 11-10-2018 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 Gene3D G3DSA:1.25.60.10 5 138 1.4E-42 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SUPERFAMILY SSF161093 284 455 2.62E-54 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 TIGRFAM TIGR00400 mgtE: magnesium transporter 22 456 1.7E-132 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 ABE28_006215 2c56ce71af08d12f721583db9cf49cc8 459 SMART SM00924 38 143 1.0E-25 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 Pfam PF00512 His Kinase A (phospho-acceptor) domain 187 252 1.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 298 407 1.5E-25 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 SUPERFAMILY SSF47384 179 254 2.35E-15 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 SMART SM00387 298 409 1.4E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 369 387 7.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 349 7.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 363 7.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 406 7.6E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 SUPERFAMILY SSF55874 242 407 2.23E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 SMART SM00388 186 253 6.0E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 Gene3D G3DSA:1.10.287.130 174 255 3.8E-17 T 11-10-2018 ABE28_023440 9f2edd7ac13e9d7d9c30027a1e7e6cce 412 Gene3D G3DSA:3.30.565.10 263 412 8.7E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001415 076c499af249e4dabea57304f2860bce 336 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 146 333 3.7E-51 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001415 076c499af249e4dabea57304f2860bce 336 SUPERFAMILY SSF81606 130 333 5.89E-9 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001415 076c499af249e4dabea57304f2860bce 336 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 8.0E-23 T 11-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 ABE28_001415 076c499af249e4dabea57304f2860bce 336 Gene3D G3DSA:3.60.40.10 86 334 1.3E-56 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001415 076c499af249e4dabea57304f2860bce 336 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 7.9E-27 T 11-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 ABE28_001415 076c499af249e4dabea57304f2860bce 336 SUPERFAMILY SSF101215 3 84 7.85E-25 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 ABE28_001415 076c499af249e4dabea57304f2860bce 336 Gene3D G3DSA:1.10.1240.30 1 84 3.0E-28 T 11-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 ABE28_001415 076c499af249e4dabea57304f2860bce 336 SMART SM00331 119 334 4.8E-61 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 346 4.6E-111 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 347 41.336 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 SUPERFAMILY SSF56059 132 352 2.65E-59 T 11-10-2018 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Gene3D G3DSA:3.30.470.20 220 360 1.3E-49 T 11-10-2018 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 99 110 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 SUPERFAMILY SSF52440 1 131 2.21E-35 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Pfam PF01820 D-ala D-ala ligase N-terminus 4 121 5.0E-30 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 289 317 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 PIRSF PIRSF039102 1 355 5.1E-115 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Gene3D G3DSA:3.40.50.20 1 142 7.5E-36 T 11-10-2018 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Gene3D G3DSA:3.30.1490.20 147 219 2.4E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_001340 35d71a2e77a2073268dda32871fcc765 360 Pfam PF07478 D-ala D-ala ligase C-terminus 140 343 1.4E-76 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 ABE28_003740 dd0bbd2cafdd79954d52b363c8c61b23 235 SUPERFAMILY SSF88946 19 86 1.41E-8 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_003740 dd0bbd2cafdd79954d52b363c8c61b23 235 Pfam PF08281 Sigma-70, region 4 109 153 1.9E-6 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_003740 dd0bbd2cafdd79954d52b363c8c61b23 235 SUPERFAMILY SSF88659 106 162 1.64E-7 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_003740 dd0bbd2cafdd79954d52b363c8c61b23 235 Pfam PF04542 Sigma-70 region 2 20 83 2.1E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_003740 dd0bbd2cafdd79954d52b363c8c61b23 235 Gene3D G3DSA:1.20.140.160 16 160 1.9E-9 T 11-10-2018 ABE28_007835 3a5694311ba8fbbd446085f75dba4976 76 SUPERFAMILY SSF54814 15 59 7.85E-7 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 ABE28_007835 3a5694311ba8fbbd446085f75dba4976 76 Pfam PF13083 KH domain 2 74 2.0E-23 T 11-10-2018 ABE28_007835 3a5694311ba8fbbd446085f75dba4976 76 Gene3D G3DSA:3.30.300.20 5 62 4.7E-6 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_007835 3a5694311ba8fbbd446085f75dba4976 76 Hamap MF_00088 UPF0109 protein . 1 75 21.364 T 11-10-2018 IPR020627 Uncharacterised protein family UPF0109 ABE28_009795 56f54b9a30bb327bff6d39e23467de0a 213 Pfam PF13460 NAD(P)H-binding 7 199 1.1E-18 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_009795 56f54b9a30bb327bff6d39e23467de0a 213 Gene3D G3DSA:3.40.50.720 1 211 4.0E-49 T 11-10-2018 ABE28_009795 56f54b9a30bb327bff6d39e23467de0a 213 SUPERFAMILY SSF51735 1 211 8.73E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 PIRSF PIRSF001024 2 482 2.6E-63 T 11-10-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 SUPERFAMILY SSF51445 28 391 5.57E-79 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 SMART SM00642 38 385 2.7E-49 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 Pfam PF00128 Alpha amylase, catalytic domain 66 356 1.5E-48 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 Gene3D G3DSA:3.20.20.80 25 389 1.8E-115 T 11-10-2018 ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 SUPERFAMILY SSF51011 394 473 4.8E-10 T 11-10-2018 ABE28_005940 ed41d5f437c52e99b649bd40df575feb 511 Gene3D G3DSA:2.60.40.1180 390 486 2.8E-33 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_001690 f59110c8864beccee79f35fb0e9e7ffb 346 Pfam PF01032 FecCD transport family 32 341 2.2E-91 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_001690 f59110c8864beccee79f35fb0e9e7ffb 346 SUPERFAMILY SSF81345 16 341 1.96E-83 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_001690 f59110c8864beccee79f35fb0e9e7ffb 346 Gene3D G3DSA:1.10.3470.10 17 345 5.0E-95 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 SUPERFAMILY SSF46689 6 69 1.5E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 55 5.5E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.1E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 Gene3D G3DSA:1.10.357.10 6 180 2.2E-44 T 11-10-2018 ABE28_009690 a55af8e98da1fd3501040c684d73af6a 180 SUPERFAMILY SSF48498 124 179 4.89E-9 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_015615 ed2f3d8842a2869b52f4f44dc62072a4 374 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 14 374 2.8E-159 T 11-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH ABE28_015615 ed2f3d8842a2869b52f4f44dc62072a4 374 SUPERFAMILY SSF52540 71 287 4.6E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015615 ed2f3d8842a2869b52f4f44dc62072a4 374 Pfam PF01926 50S ribosome-binding GTPase 170 232 3.0E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_015615 ed2f3d8842a2869b52f4f44dc62072a4 374 Gene3D G3DSA:3.40.50.300 64 232 2.9E-49 T 11-10-2018 ABE28_015420 227b2a8e776ebfca91aadf342ae7686f 125 Gene3D G3DSA:1.10.3830.10 5 124 6.7E-40 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABE28_015420 227b2a8e776ebfca91aadf342ae7686f 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 119 7.6E-36 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABE28_015420 227b2a8e776ebfca91aadf342ae7686f 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 72 83 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 ABE28_009585 9ec4423dcfd1538604b2d36385f83dd9 502 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 22 489 5.3E-124 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_009585 9ec4423dcfd1538604b2d36385f83dd9 502 PIRSF PIRSF005690 8 501 3.1E-124 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_019900 c2f6a884de91cb24c28ed678c326b67c 123 Pfam PF01380 SIS domain 12 93 3.1E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_019900 c2f6a884de91cb24c28ed678c326b67c 123 SUPERFAMILY SSF53697 3 105 1.37E-20 T 11-10-2018 ABE28_019900 c2f6a884de91cb24c28ed678c326b67c 123 Gene3D G3DSA:3.40.50.10490 1 123 1.9E-31 T 11-10-2018 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 53 4.6E-15 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 Gene3D G3DSA:3.40.50.2300 69 329 1.9E-78 T 11-10-2018 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 Gene3D G3DSA:3.40.50.2300 168 334 1.9E-78 T 11-10-2018 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 SMART SM00354 8 78 1.0E-27 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 Pfam PF13377 Periplasmic binding protein-like domain 176 337 8.7E-37 T 11-10-2018 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 Gene3D G3DSA:1.10.260.40 1 65 5.1E-20 T 11-10-2018 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 SUPERFAMILY SSF47413 8 66 3.28E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_001855 fac7f81d01172ba0e915dfe68c51ffd6 337 SUPERFAMILY SSF53822 68 336 2.23E-77 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_007935 d2bb52b10ecb82eb8d1def2ad046e406 152 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 152 2.4E-47 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 ABE28_007935 d2bb52b10ecb82eb8d1def2ad046e406 152 Pfam PF00460 Flagella basal body rod protein 11 34 8.6E-5 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_007935 d2bb52b10ecb82eb8d1def2ad046e406 152 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 102 149 4.1E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_002695 289acc5f75fdd917028326f40287f99f 248 Gene3D G3DSA:3.90.230.10 1 248 5.7E-104 T 11-10-2018 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 1.2E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 1.2E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 1.2E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.2E-19 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 SUPERFAMILY SSF55920 1 246 1.07E-84 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_002695 289acc5f75fdd917028326f40287f99f 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 4.4E-95 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 39.574 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 ABE28_002695 289acc5f75fdd917028326f40287f99f 248 Pfam PF00557 Metallopeptidase family M24 12 239 5.9E-54 T 11-10-2018 IPR000994 Peptidase M24 ABE28_011320 580b73ee3d89bb7487b6aae95d7954e5 478 Gene3D G3DSA:1.20.1740.10 9 476 3.1E-67 T 11-10-2018 ABE28_011320 580b73ee3d89bb7487b6aae95d7954e5 478 Pfam PF00324 Amino acid permease 19 460 2.1E-122 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_011320 580b73ee3d89bb7487b6aae95d7954e5 478 PIRSF PIRSF006060 1 475 5.7E-84 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_011320 580b73ee3d89bb7487b6aae95d7954e5 478 ProSitePatterns PS00218 Amino acid permeases signature. 44 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_009410 7ecc20c2cf7481ff8d574fac451ddbbb 160 Pfam PF11188 Protein of unknown function (DUF2975) 31 160 3.2E-39 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF01568 Molydopterin dinucleotide binding domain 825 932 3.4E-22 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 266 283 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 PIRSF PIRSF036643 3 969 0.0 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:3.10.20.740 8 128 1.5E-29 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 194 205 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:3.30.70.20 131 212 1.9E-21 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SUPERFAMILY SSF50692 789 937 6.42E-36 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SUPERFAMILY SSF54862 81 215 2.09E-29 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SMART SM00929 87 128 4.3E-11 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 89 126 6.9E-10 T 11-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SMART SM00926 261 315 3.4E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF00384 Molybdopterin oxidoreductase 318 741 5.1E-81 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:2.40.40.20 817 945 3.0E-30 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:3.40.228.10 396 595 9.0E-163 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:2.20.25.90 261 316 5.2E-19 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SUPERFAMILY SSF54292 10 78 4.41E-14 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Gene3D G3DSA:3.40.50.740 323 784 9.0E-163 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 8 79 1.7E-14 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF12838 4Fe-4S dicluster domain 150 208 6.7E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 266 935 9.1E-258 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 SUPERFAMILY SSF53706 256 827 3.93E-191 T 11-10-2018 ABE28_002965 a2a4fdc61025c61a2adb62c73960360d 995 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 262 315 7.3E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 SUPERFAMILY SSF53254 2 188 4.19E-53 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 PIRSF PIRSF000709 2 170 4.4E-7 T 11-10-2018 ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 Gene3D G3DSA:3.40.50.1240 1 189 2.3E-52 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 SMART SM00855 3 146 1.6E-23 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 11-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 ABE28_011970 074483c677ba456e3aa946a1bf5ef2f3 189 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 2.3E-48 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 SUPERFAMILY SSF103473 7 468 1.44E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 Pfam PF07690 Major Facilitator Superfamily 16 406 1.5E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 Gene3D G3DSA:1.20.1250.20 257 473 9.3E-23 T 11-10-2018 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 Gene3D G3DSA:1.20.1720.10 11 220 1.4E-38 T 11-10-2018 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 441 1.2E-115 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 3.7E-6 T 11-10-2018 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 3.7E-6 T 11-10-2018 ABE28_000755 431352f01a7babad2a1fe255f2f243c7 480 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 3.7E-6 T 11-10-2018 ABE28_021590 2f079e72c3edc253978e671c82d896fe 77 Pfam PF07293 Protein of unknown function (DUF1450) 1 74 5.5E-36 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 ABE28_021590 2f079e72c3edc253978e671c82d896fe 77 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 4.0E-27 T 11-10-2018 ABE28_021590 2f079e72c3edc253978e671c82d896fe 77 Hamap MF_01542 UPF0349 protein . 1 77 29.114 T 11-10-2018 IPR022916 Protein of unknown function UPF0349 ABE28_009900 719afcdade52c53d35e49a201f919603 355 SUPERFAMILY SSF47384 126 198 8.44E-17 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_009900 719afcdade52c53d35e49a201f919603 355 Gene3D G3DSA:1.10.287.130 138 197 1.9E-19 T 11-10-2018 ABE28_009900 719afcdade52c53d35e49a201f919603 355 SUPERFAMILY SSF55874 201 349 1.31E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009900 719afcdade52c53d35e49a201f919603 355 SMART SM00388 135 200 9.6E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_009900 719afcdade52c53d35e49a201f919603 355 SUPERFAMILY SSF55785 51 129 1.08E-6 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_009900 719afcdade52c53d35e49a201f919603 355 Gene3D G3DSA:3.30.450.20 18 132 1.0E-9 T 11-10-2018 ABE28_009900 719afcdade52c53d35e49a201f919603 355 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 244 349 2.3E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009900 719afcdade52c53d35e49a201f919603 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 8.6E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009900 719afcdade52c53d35e49a201f919603 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 8.6E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009900 719afcdade52c53d35e49a201f919603 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 335 348 8.6E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009900 719afcdade52c53d35e49a201f919603 355 PRINTS PR00344 Bacterial sensor protein C-terminal signature 300 310 8.6E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_009900 719afcdade52c53d35e49a201f919603 355 Pfam PF00512 His Kinase A (phospho-acceptor) domain 137 199 4.0E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_009900 719afcdade52c53d35e49a201f919603 355 Gene3D G3DSA:3.30.565.10 202 353 2.6E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009900 719afcdade52c53d35e49a201f919603 355 SMART SM00387 243 351 3.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 9.2E-122 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 PIRSF PIRSF000428 1 323 5.1E-106 T 11-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 Gene3D G3DSA:3.40.50.10950 18 319 1.8E-129 T 11-10-2018 ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 319 9.0E-123 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 SUPERFAMILY SSF53659 4 321 4.93E-93 T 11-10-2018 ABE28_023105 68cfcaac66780e55589fc8fb8560e0e6 328 Gene3D G3DSA:3.40.50.10750 142 295 1.8E-129 T 11-10-2018 ABE28_021635 6f6e8173707903f648f9d6b97c3ec33b 169 Gene3D G3DSA:1.10.3760.10 5 169 1.1E-74 T 11-10-2018 ABE28_021635 6f6e8173707903f648f9d6b97c3ec33b 169 SUPERFAMILY SSF101307 15 165 1.03E-54 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 ABE28_021635 6f6e8173707903f648f9d6b97c3ec33b 169 Pfam PF04608 Phosphatidylglycerophosphatase A 26 162 5.6E-20 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 ABE28_021635 6f6e8173707903f648f9d6b97c3ec33b 169 PIRSF PIRSF019587 7 169 6.7E-77 T 11-10-2018 IPR026038 Putative phosphatidylglycerophosphatase ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 Pfam PF00107 Zinc-binding dehydrogenase 172 297 1.9E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 SMART SM00829 9 336 0.0066 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 Gene3D G3DSA:3.40.50.720 147 283 3.5E-98 T 11-10-2018 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 Gene3D G3DSA:3.90.180.10 14 321 3.5E-98 T 11-10-2018 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 5.9E-34 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 SUPERFAMILY SSF50129 1 171 1.26E-49 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_012510 3ffd2d17b7e85732c210cbbeb20e6c5c 339 SUPERFAMILY SSF51735 137 302 1.51E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011355 49aff41bd5171300e738c814bc503c5d 494 Pfam PF00474 Sodium:solute symporter family 33 428 4.9E-23 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_011355 49aff41bd5171300e738c814bc503c5d 494 Gene3D G3DSA:1.20.1730.10 21 493 9.4E-36 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 390 405 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 518 531 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 552 561 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 228 251 1.6E-31 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Gene3D G3DSA:1.10.730.20 631 918 1.2E-101 T 11-10-2018 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 916 21.088 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Pfam PF06827 Zinc finger found in FPG and IleRS 885 914 1.2E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 632 9.7E-220 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Gene3D G3DSA:3.40.50.620 24 620 1.6E-263 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Gene3D G3DSA:3.90.740.10 193 397 1.6E-263 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 SUPERFAMILY SSF47323 643 917 4.11E-78 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 13 832 0.0 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 SUPERFAMILY SSF50677 202 392 8.06E-62 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 Pfam PF08264 Anticodon-binding domain of tRNA 676 830 6.8E-28 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 ABE28_007590 0b7e3ea860a2ae6bb5be0fcabe5dc7eb 922 SUPERFAMILY SSF52374 1 639 1.79E-156 T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 Gene3D G3DSA:3.40.50.2300 153 326 4.4E-48 T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.9E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.3E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.3E-7 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 Gene3D G3DSA:1.10.260.40 1 47 3.1E-18 T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 Pfam PF13377 Periplasmic binding protein-like domain 163 328 8.6E-35 T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 Gene3D G3DSA:3.40.50.2300 76 320 4.4E-48 T 11-10-2018 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 SMART SM00354 1 69 2.6E-12 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 SUPERFAMILY SSF47413 3 51 1.41E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_020040 84e6eaba70dd04031531865b047eac6c 329 SUPERFAMILY SSF53822 72 322 1.13E-47 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_017130 c23af39ec643fdbf7f4703d9175c2559 155 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 120 1.9E-28 T 11-10-2018 IPR014229 Sporulation protein YtfJ ABE28_017130 c23af39ec643fdbf7f4703d9175c2559 155 PIRSF PIRSF021377 1 153 2.7E-60 T 11-10-2018 IPR014229 Sporulation protein YtfJ ABE28_017130 c23af39ec643fdbf7f4703d9175c2559 155 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 129 8.1E-55 T 11-10-2018 IPR014229 Sporulation protein YtfJ ABE28_023090 f419c774886de615585540c822b3b5d9 73 Hamap MF_01863 UPF0741 protein . 1 73 29.43 T 11-10-2018 IPR020880 Protein of unknown function UPF0741 ABE28_023090 f419c774886de615585540c822b3b5d9 73 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 3.1E-11 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 ABE28_023090 f419c774886de615585540c822b3b5d9 73 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 8 73 2.0E-4 T 11-10-2018 ABE28_001560 1e0f292a45bcbf0a8b0192be8900ea8e 70 Pfam PF14146 Domain of unknown function (DUF4305) 19 55 1.0E-13 T 11-10-2018 IPR025426 Protein of unknown function DUF4305 ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 215 1.9E-83 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 11-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 SUPERFAMILY SSF100950 2 227 1.86E-87 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 SMART SM00882 5 216 7.1E-88 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 Gene3D G3DSA:3.40.1080.10 1 226 1.9E-98 T 11-10-2018 ABE28_018500 bb853cad15b5bf0209450ac85ab78c47 231 Pfam PF01144 Coenzyme A transferase 7 214 2.7E-77 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 PIRSF PIRSF000139 8 439 4.8E-121 T 11-10-2018 ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 SUPERFAMILY SSF54862 22 119 2.43E-17 T 11-10-2018 ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 Pfam PF13534 4Fe-4S dicluster domain 27 93 2.9E-11 T 11-10-2018 ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 Gene3D G3DSA:1.10.1060.10 17 107 3.6E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 Pfam PF02754 Cysteine-rich domain 326 410 2.7E-12 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 Pfam PF02754 Cysteine-rich domain 198 279 4.2E-17 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_011665 4f98759c7221639dcde05f45f5b6ff12 439 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_021380 e50c1a277ccfec66dae6101e78fcd0be 263 SUPERFAMILY SSF52540 2 230 6.27E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021380 e50c1a277ccfec66dae6101e78fcd0be 263 Pfam PF00005 ABC transporter 17 165 1.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_021380 e50c1a277ccfec66dae6101e78fcd0be 263 Gene3D G3DSA:3.40.50.300 1 253 1.4E-66 T 11-10-2018 ABE28_021380 e50c1a277ccfec66dae6101e78fcd0be 263 SMART SM00382 26 215 3.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001205 1671d614a749ec234707da41a7a92d08 192 Gene3D G3DSA:3.90.45.10 2 189 4.0E-65 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_001205 1671d614a749ec234707da41a7a92d08 192 Pfam PF01327 Polypeptide deformylase 12 177 6.0E-48 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 PRINTS PR01576 Peptide deformylase signature 116 127 1.5E-31 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 PRINTS PR01576 Peptide deformylase signature 148 177 1.5E-31 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 PRINTS PR01576 Peptide deformylase signature 129 147 1.5E-31 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 PRINTS PR01576 Peptide deformylase signature 55 84 1.5E-31 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 SUPERFAMILY SSF56420 5 186 1.83E-60 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_001205 1671d614a749ec234707da41a7a92d08 192 Hamap MF_00163 Peptide deformylase [def]. 11 190 28.749 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 13 188 1.3E-46 T 11-10-2018 IPR023635 Peptide deformylase ABE28_001205 1671d614a749ec234707da41a7a92d08 192 PIRSF PIRSF004749 3 191 1.8E-50 T 11-10-2018 IPR023635 Peptide deformylase ABE28_015350 0058643fe630be96ada21ba89e299c62 235 SUPERFAMILY SSF53335 13 104 3.87E-7 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015350 0058643fe630be96ada21ba89e299c62 235 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 231 4.5E-71 T 11-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 ABE28_015350 0058643fe630be96ada21ba89e299c62 235 Gene3D G3DSA:3.40.50.150 2 163 6.1E-54 T 11-10-2018 ABE28_015350 0058643fe630be96ada21ba89e299c62 235 PIRSF PIRSF018637 4 235 8.8E-83 T 11-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 PIRSF PIRSF001434 1 378 7.9E-147 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 Gene3D G3DSA:3.90.1150.10 246 378 3.4E-54 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 Gene3D G3DSA:3.40.640.10 3 245 8.4E-93 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 376 8.1E-158 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_015665 204ae9308f91ce3ea46af8e042f42819 378 SUPERFAMILY SSF53383 18 377 1.46E-120 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 Gene3D G3DSA:2.30.42.10 306 405 4.7E-23 T 11-10-2018 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 SUPERFAMILY SSF50156 302 401 5.78E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 Pfam PF13180 PDZ domain 304 401 1.7E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 SMART SM00228 303 392 1.1E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 Gene3D G3DSA:2.40.10.10 62 181 1.0E-26 T 11-10-2018 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 SUPERFAMILY SSF50494 77 299 2.39E-56 T 11-10-2018 IPR009003 Peptidase S1, PA clan ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 Gene3D G3DSA:2.40.10.10 183 305 4.7E-38 T 11-10-2018 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 258 275 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 PRINTS PR00834 HtrA/DegQ protease family signature 349 361 3.2E-36 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 ABE28_023640 675839aebde9fb63780ef0e0c18fda2a 406 Pfam PF13365 Trypsin-like peptidase domain 118 265 1.6E-31 T 11-10-2018 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Gene3D G3DSA:1.20.1480.50 143 238 6.8E-18 T 11-10-2018 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 410 5.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 454 5.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 417 435 5.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 396 5.9E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SMART SM00387 345 457 1.4E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 298 4.4E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Pfam PF00672 HAMP domain 182 228 3.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SUPERFAMILY SSF47384 217 299 1.1E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SUPERFAMILY SSF55874 289 453 2.1E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SUPERFAMILY SSF158472 183 229 9.55E-10 T 11-10-2018 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 3.0E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Gene3D G3DSA:3.30.565.10 301 455 2.9E-41 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 Gene3D G3DSA:1.10.287.130 239 296 1.4E-15 T 11-10-2018 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SMART SM00304 181 233 1.4E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_004935 a7f03c81cb0e5c3ab85771aba4e578ec 457 SMART SM00388 234 300 6.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 1.3E-61 T 11-10-2018 ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.4E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 Gene3D G3DSA:3.40.50.720 1 252 1.4E-73 T 11-10-2018 ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.2E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 SUPERFAMILY SSF51735 4 251 2.35E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018365 115124d244027fa1e7cf2e31c67ef966 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_011255 05ca92711ffa0c6b6e87b7875e3688c6 362 Pfam PF12706 Beta-lactamase superfamily domain 115 311 1.4E-47 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_011255 05ca92711ffa0c6b6e87b7875e3688c6 362 Gene3D G3DSA:3.60.15.10 87 357 1.3E-83 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011255 05ca92711ffa0c6b6e87b7875e3688c6 362 SUPERFAMILY SSF56281 98 346 3.94E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011255 05ca92711ffa0c6b6e87b7875e3688c6 362 PIRSF PIRSF038896 14 353 1.4E-96 T 11-10-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.4E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 SUPERFAMILY SSF51735 5 243 1.71E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 242 1.2E-63 T 11-10-2018 ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 Gene3D G3DSA:3.40.50.720 1 248 7.9E-73 T 11-10-2018 ABE28_005460 96e523547d88b7f9dc2b8b4879b63874 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_015065 20b138598b836976b88e21f5fce84b1e 127 Gene3D G3DSA:3.40.250.10 27 126 1.7E-25 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_015065 20b138598b836976b88e21f5fce84b1e 127 Pfam PF00581 Rhodanese-like domain 38 120 7.2E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_015065 20b138598b836976b88e21f5fce84b1e 127 SUPERFAMILY SSF52821 9 120 1.7E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_015065 20b138598b836976b88e21f5fce84b1e 127 SMART SM00450 30 125 9.3E-23 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 451 5.1E-176 T 11-10-2018 ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 Pfam PF01938 TRAM domain 9 64 1.8E-10 T 11-10-2018 IPR002792 TRAM domain ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 SUPERFAMILY SSF50249 4 64 2.0E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 232 453 2.5E-20 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 Gene3D G3DSA:3.40.1350.30 136 291 2.7E-112 T 11-10-2018 ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 441 451 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 Gene3D G3DSA:3.40.50.150 87 453 2.7E-112 T 11-10-2018 ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 390 421 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 SUPERFAMILY SSF53335 74 453 3.15E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_002780 13065fe9eda241a44a5c9072c72ae22c 462 Gene3D G3DSA:2.40.50.140 3 85 5.0E-23 T 11-10-2018 ABE28_005025 35542c17920cd004b536634ad79589ed 585 Gene3D G3DSA:3.40.50.970 1 178 1.4E-63 T 11-10-2018 ABE28_005025 35542c17920cd004b536634ad79589ed 585 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 174 4.9E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_005025 35542c17920cd004b536634ad79589ed 585 SUPERFAMILY SSF52467 158 345 5.2E-41 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_005025 35542c17920cd004b536634ad79589ed 585 SUPERFAMILY SSF52518 373 560 7.23E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005025 35542c17920cd004b536634ad79589ed 585 SUPERFAMILY SSF52518 2 178 8.16E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005025 35542c17920cd004b536634ad79589ed 585 Gene3D G3DSA:3.40.50.1220 190 364 3.4E-44 T 11-10-2018 ABE28_005025 35542c17920cd004b536634ad79589ed 585 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 333 8.9E-39 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABE28_005025 35542c17920cd004b536634ad79589ed 585 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 554 1.0E-40 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_005025 35542c17920cd004b536634ad79589ed 585 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABE28_005025 35542c17920cd004b536634ad79589ed 585 Gene3D G3DSA:3.40.50.970 365 572 9.5E-59 T 11-10-2018 ABE28_007650 22add723168af414ef9b781499f1a80e 211 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 8 177 2.2E-52 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_007650 22add723168af414ef9b781499f1a80e 211 SUPERFAMILY SSF53271 4 202 6.03E-55 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_007650 22add723168af414ef9b781499f1a80e 211 Pfam PF00156 Phosphoribosyl transferase domain 45 153 4.4E-21 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_007650 22add723168af414ef9b781499f1a80e 211 Gene3D G3DSA:3.40.50.2020 1 211 1.2E-68 T 11-10-2018 ABE28_007650 22add723168af414ef9b781499f1a80e 211 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 211 31.489 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:2.60.40.10 482 614 6.0E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:2.180.10.10 1801 2117 8.7E-14 T 11-10-2018 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:2.180.10.10 2118 2469 1.0E-24 T 11-10-2018 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2383 2470 1.2E-16 T 11-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 81 263 2.0E-6 T 11-10-2018 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:3.90.930.1 1564 1702 9.1E-7 T 11-10-2018 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Pfam PF05593 RHS Repeat 2361 2393 1.2E-5 T 11-10-2018 IPR031325 RHS repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Pfam PF05593 RHS Repeat 1636 1672 5.5E-6 T 11-10-2018 IPR031325 RHS repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:2.60.40.10 708 826 3.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 Gene3D G3DSA:2.60.40.10 615 707 3.3E-12 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 SUPERFAMILY SSF49265 483 703 3.3E-13 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1636 1677 7.0E-7 T 11-10-2018 IPR006530 YD repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1615 1655 1.4E-4 T 11-10-2018 IPR006530 YD repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1899 1928 0.0012 T 11-10-2018 IPR006530 YD repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1737 1777 3.1E-4 T 11-10-2018 IPR006530 YD repeat ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 SMART SM00060 617 698 0.054 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 ABE28_012390 354ac5e57bb0f64d5a2bfee73091ba3a 2684 SMART SM00060 484 601 1.0 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Gene3D G3DSA:3.40.1190.10 97 336 5.4E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Pfam PF08245 Mur ligase middle domain 106 311 1.6E-54 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 SUPERFAMILY SSF53623 97 331 3.01E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 SUPERFAMILY SSF53244 332 485 3.79E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Gene3D G3DSA:3.90.190.20 337 489 1.4E-59 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Pfam PF01225 Mur ligase family, catalytic domain 22 94 4.3E-12 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 SUPERFAMILY SSF63418 1 97 2.62E-26 T 11-10-2018 IPR035911 MurE/MurF, N-terminal ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Pfam PF02875 Mur ligase family, glutamate ligase domain 332 416 1.0E-23 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 483 5.7E-168 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 483 36.098 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 ABE28_007500 5175d3b96b30b668a0e01b35aebead6c 490 Gene3D G3DSA:3.40.1390.10 2 96 9.3E-29 T 11-10-2018 ABE28_011450 14ef297f58fd509a10efcdb24ad1e47e 106 SUPERFAMILY SSF54292 9 89 1.22E-19 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 ABE28_011450 14ef297f58fd509a10efcdb24ad1e47e 106 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 11 81 7.9E-14 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 ABE28_011450 14ef297f58fd509a10efcdb24ad1e47e 106 Gene3D G3DSA:3.10.20.30 3 91 1.3E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_011845 7e0320ff915a699d9027eb17d009cee0 65 Pfam PF11755 Protein of unknown function (DUF3311) 7 63 1.6E-17 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Gene3D G3DSA:3.10.350.10 212 261 1.0E-8 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Pfam PF01476 LysM domain 216 256 2.5E-5 T 11-10-2018 IPR018392 LysM domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Pfam PF01476 LysM domain 34 75 5.6E-8 T 11-10-2018 IPR018392 LysM domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SMART SM00257 33 76 1.2E-7 T 11-10-2018 IPR018392 LysM domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SMART SM00257 215 258 4.5E-4 T 11-10-2018 IPR018392 LysM domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SUPERFAMILY SSF54106 216 258 1.96E-7 T 11-10-2018 ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Gene3D G3DSA:3.90.1720.10 264 389 7.6E-28 T 11-10-2018 ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Pfam PF00877 NlpC/P60 family 113 205 1.6E-10 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Pfam PF00877 NlpC/P60 family 290 388 2.0E-18 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Gene3D G3DSA:3.10.350.10 26 83 9.2E-12 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SUPERFAMILY SSF54001 83 207 4.66E-15 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SUPERFAMILY SSF54001 274 387 4.41E-25 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_017850 47e11ec38bf4f2880640777235422be0 400 SUPERFAMILY SSF54106 33 75 1.44E-8 T 11-10-2018 ABE28_017850 47e11ec38bf4f2880640777235422be0 400 Gene3D G3DSA:3.90.1720.10 84 211 1.2E-17 T 11-10-2018 ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 SUPERFAMILY SSF52922 188 325 5.5E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 SMART SM00861 4 179 1.5E-64 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 Gene3D G3DSA:3.40.50.920 193 325 7.2E-46 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 1.6E-40 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 Gene3D G3DSA:3.40.50.970 1 192 5.9E-81 T 11-10-2018 ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 SUPERFAMILY SSF52518 4 193 4.71E-66 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_007150 fd1dd7b2b0ba7db5a3f8e9a911f46762 325 Pfam PF02780 Transketolase, C-terminal domain 194 313 2.8E-37 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 SMART SM00382 26 216 1.1E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 Gene3D G3DSA:3.40.50.300 1 255 1.0E-76 T 11-10-2018 ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 PIRSF PIRSF039085 1 244 3.6E-109 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 SUPERFAMILY SSF52540 1 238 2.92E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 Pfam PF00005 ABC transporter 17 168 7.8E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003020 f9e9617d67d7b1e9262cbcfab8b9aeae 256 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002935 4885800409e9d00240cee909fa820f33 159 Pfam PF07849 Protein of unknown function (DUF1641) 121 154 1.9E-12 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 ABE28_006360 50d079c0e9437aa1a842891d133174c3 312 Pfam PF02272 DHHA1 domain 186 310 3.4E-11 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_006360 50d079c0e9437aa1a842891d133174c3 312 Pfam PF01368 DHH family 18 155 6.1E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_006360 50d079c0e9437aa1a842891d133174c3 312 SUPERFAMILY SSF64182 16 306 1.7E-63 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_006360 50d079c0e9437aa1a842891d133174c3 312 Gene3D G3DSA:3.90.1640.10 2 199 1.1E-58 T 11-10-2018 ABE28_006360 50d079c0e9437aa1a842891d133174c3 312 Gene3D G3DSA:3.10.310.30 202 311 1.6E-32 T 11-10-2018 ABE28_010745 077fb4c51b042a34366f7615028d0cde 49 Pfam PF14174 YycC-like protein 1 48 2.8E-21 T 11-10-2018 IPR025550 YycC-like protein ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 Gene3D G3DSA:3.30.70.360 222 335 2.3E-129 T 11-10-2018 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 SUPERFAMILY SSF53187 16 416 1.18E-80 T 11-10-2018 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 17 412 1.7E-123 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 Pfam PF01546 Peptidase family M20/M25/M40 87 414 5.6E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 Gene3D G3DSA:3.40.630.10 26 410 2.3E-129 T 11-10-2018 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 SUPERFAMILY SSF55031 222 336 2.09E-25 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 PIRSF PIRSF001235 13 420 2.6E-132 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_008410 a91d9c2986e1cd9d0755447107fefe2d 420 Pfam PF07687 Peptidase dimerisation domain 222 319 3.2E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_023155 b34a9e804e72fd10615eb7785da6ec9d 154 Gene3D G3DSA:3.90.1170.40 1 144 2.0E-51 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_023155 b34a9e804e72fd10615eb7785da6ec9d 154 Pfam PF02391 MoaE protein 6 116 4.7E-35 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_023155 b34a9e804e72fd10615eb7785da6ec9d 154 SUPERFAMILY SSF54690 4 136 2.75E-45 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_002700 fbc88ae16e19ce3ce6a5d6d01bfb677b 188 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 6 126 5.7E-26 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ABE28_002700 fbc88ae16e19ce3ce6a5d6d01bfb677b 188 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 6 122 6.5E-26 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 ABE28_002700 fbc88ae16e19ce3ce6a5d6d01bfb677b 188 SUPERFAMILY SSF52540 4 126 6.27E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002700 fbc88ae16e19ce3ce6a5d6d01bfb677b 188 Gene3D G3DSA:3.40.50.300 5 172 3.8E-42 T 11-10-2018 ABE28_012400 898a65be3f9372fd886a314c10db29e4 410 Pfam PF01266 FAD dependent oxidoreductase 29 383 9.8E-44 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_012400 898a65be3f9372fd886a314c10db29e4 410 Gene3D G3DSA:3.50.50.60 29 387 2.5E-62 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_012400 898a65be3f9372fd886a314c10db29e4 410 Gene3D G3DSA:3.30.9.10 123 346 2.5E-62 T 11-10-2018 ABE28_012400 898a65be3f9372fd886a314c10db29e4 410 SUPERFAMILY SSF51905 27 393 6.29E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SUPERFAMILY SSF51717 337 597 1.83E-78 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Pfam PF00809 Pterin binding enzyme 340 573 1.0E-42 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SUPERFAMILY SSF82282 5 379 2.22E-112 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:1.10.1240.10 618 704 7.0E-27 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:3.40.50.280 710 860 3.2E-44 T 11-10-2018 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SUPERFAMILY SSF56507 878 1148 2.75E-83 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:1.10.288.10 898 956 3.2E-62 T 11-10-2018 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 TIGRFAM TIGR02082 metH: methionine synthase 11 1147 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SUPERFAMILY SSF47644 625 706 8.37E-24 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:3.20.20.330 1 320 2.3E-111 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SMART SM01018 624 707 8.2E-36 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 SUPERFAMILY SSF52242 709 842 1.11E-37 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Pfam PF02574 Homocysteine S-methyltransferase 15 304 2.2E-77 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:3.20.20.20 321 617 6.1E-101 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 900 1148 6.5E-52 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 PIRSF PIRSF000381 1 1149 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Gene3D G3DSA:3.10.196.10 870 1148 3.2E-62 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Pfam PF02310 B12 binding domain 714 803 4.8E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_012990 908412547e75ea7ffa9826d2ddc14bad 1149 Pfam PF02607 B12 binding domain 627 700 2.6E-24 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_001980 f6bc7511501ddac60182749a57b47518 389 PIRSF PIRSF012509 1 389 1.2E-156 T 11-10-2018 IPR011426 CamS sex pheromone cAM373 ABE28_001980 f6bc7511501ddac60182749a57b47518 389 Gene3D G3DSA:3.10.570.10 53 389 3.2E-143 T 11-10-2018 ABE28_001980 f6bc7511501ddac60182749a57b47518 389 Pfam PF07537 CamS sex pheromone cAM373 precursor 57 381 1.1E-132 T 11-10-2018 IPR011426 CamS sex pheromone cAM373 ABE28_010760 056571aada1d6f3828836dd12bf270b9 136 Gene3D G3DSA:3.40.50.720 1 136 7.6E-37 T 11-10-2018 ABE28_010760 056571aada1d6f3828836dd12bf270b9 136 SMART SM00881 14 106 2.8E-15 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_010760 056571aada1d6f3828836dd12bf270b9 136 SUPERFAMILY SSF51735 9 134 5.69E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010760 056571aada1d6f3828836dd12bf270b9 136 Pfam PF13380 CoA binding domain 18 132 1.3E-36 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_015150 2b05b902806fb3f202bf321f95ef06e6 366 Gene3D G3DSA:3.40.50.12710 1 366 5.8E-97 T 11-10-2018 IPR038375 Protein arginine methyltransferase NDUFAF7 superfamily Reactome: R-HSA-6799198 ABE28_015150 2b05b902806fb3f202bf321f95ef06e6 366 Pfam PF02636 Putative S-adenosyl-L-methionine-dependent methyltransferase 63 295 9.0E-47 T 11-10-2018 IPR003788 Protein arginine methyltransferase NDUFAF7 Reactome: R-HSA-6799198 ABE28_015150 2b05b902806fb3f202bf321f95ef06e6 366 SUPERFAMILY SSF53335 15 357 2.24E-83 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 SUPERFAMILY SSF52540 7 225 2.06E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 Gene3D G3DSA:3.40.50.300 5 246 1.9E-53 T 11-10-2018 ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 Gene3D G3DSA:3.40.50.300 272 484 3.2E-49 T 11-10-2018 ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 Pfam PF00005 ABC transporter 23 162 1.0E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 Pfam PF00005 ABC transporter 280 418 5.6E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 SUPERFAMILY SSF52540 281 471 4.0E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 SMART SM00382 285 467 8.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 SMART SM00382 31 210 5.0E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_010655 4fb2d97fbdfb4c0cf248f34f7a3a116f 488 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006795 3fdb31e7b066838eab655cef8498ddfd 260 ProSitePatterns PS00267 Tachykinin family signature. 48 53 - T 11-10-2018 IPR013055 Tachykinin/Neurokinin-like, conserved site ABE28_006795 3fdb31e7b066838eab655cef8498ddfd 260 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 246 4.7E-93 T 11-10-2018 IPR022493 Integral membrane YkoY ABE28_006795 3fdb31e7b066838eab655cef8498ddfd 260 Pfam PF03741 Integral membrane protein TerC family 16 205 1.0E-51 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABE28_006795 3fdb31e7b066838eab655cef8498ddfd 260 SUPERFAMILY SSF103473 11 241 1.44E-6 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 Pfam PF04055 Radical SAM superfamily 19 183 1.9E-29 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 Gene3D G3DSA:3.20.20.70 2 337 1.4E-100 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 SUPERFAMILY SSF102114 7 291 2.22E-75 T 11-10-2018 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 11-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 337 39.672 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 316 1.3E-36 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 SMART SM00729 14 222 4.5E-12 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 Pfam PF13353 4Fe-4S single cluster domain 21 128 4.1E-7 T 11-10-2018 ABE28_006010 27a1447b2c6b189a84fdaf698d8657b4 337 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 6 337 3.2E-116 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Pfam PF01938 TRAM domain 444 505 2.0E-15 T 11-10-2018 IPR002792 TRAM domain ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 SMART SM00729 214 432 6.9E-67 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 218 238 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 70 502 2.2E-160 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 SUPERFAMILY SSF102114 201 436 3.4E-66 T 11-10-2018 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 69 506 72.299 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Gene3D G3DSA:3.80.30.20 212 445 2.7E-89 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Pfam PF00919 Uncharacterized protein family UPF0004 70 171 4.0E-28 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 70 505 2.5E-206 T 11-10-2018 ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Gene3D G3DSA:3.40.50.12160 69 204 2.4E-33 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily ABE28_008370 939e1950616f87763bfecdde5aea6c9c 514 Pfam PF04055 Radical SAM superfamily 218 389 1.0E-34 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_012075 3c47573f812406adb0657191935a33b7 541 SUPERFAMILY SSF55124 272 403 4.09E-25 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 137 292 4.4E-27 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Gene3D G3DSA:3.90.480.20 16 379 3.6E-127 T 11-10-2018 ABE28_012075 3c47573f812406adb0657191935a33b7 541 PRINTS PR00397 Sirohaem Fe-binding site signature 392 410 4.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 PRINTS PR00397 Sirohaem Fe-binding site signature 436 454 4.3E-7 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 SUPERFAMILY SSF55124 10 136 3.6E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 436 452 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 314 377 1.7E-18 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 64 127 4.3E-18 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 SUPERFAMILY SSF56014 137 298 2.09E-36 T 11-10-2018 ABE28_012075 3c47573f812406adb0657191935a33b7 541 SUPERFAMILY SSF56014 393 525 6.67E-31 T 11-10-2018 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Gene3D G3DSA:3.30.413.10 392 529 3.4E-32 T 11-10-2018 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 395 532 1.6E-9 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_012075 3c47573f812406adb0657191935a33b7 541 Gene3D G3DSA:3.30.413.10 129 309 3.6E-127 T 11-10-2018 ABE28_011730 8799914a265692abe50db52ae54f1c18 85 Pfam PF10752 Protein of unknown function (DUF2533) 1 83 2.9E-33 T 11-10-2018 IPR019688 Protein of unknown function DUF2533 ABE28_022150 0d531a08e3b1c84fc93e35401395ac23 344 Gene3D G3DSA:3.40.50.1360 90 340 3.4E-76 T 11-10-2018 ABE28_022150 0d531a08e3b1c84fc93e35401395ac23 344 Gene3D G3DSA:1.10.10.10 18 89 7.6E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022150 0d531a08e3b1c84fc93e35401395ac23 344 SUPERFAMILY SSF100950 97 338 3.05E-65 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_022150 0d531a08e3b1c84fc93e35401395ac23 344 SUPERFAMILY SSF46785 19 84 8.24E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022150 0d531a08e3b1c84fc93e35401395ac23 344 Pfam PF04198 Putative sugar-binding domain 92 338 4.8E-67 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 ABE28_023035 87f952f0e3ad2d4fdd80ffc3463b324b 317 Pfam PF03851 UV-endonuclease UvdE 5 272 8.5E-102 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 ABE28_023035 87f952f0e3ad2d4fdd80ffc3463b324b 317 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 1 301 1.6E-101 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 ABE28_023035 87f952f0e3ad2d4fdd80ffc3463b324b 317 SUPERFAMILY SSF51658 76 279 3.73E-19 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_023035 87f952f0e3ad2d4fdd80ffc3463b324b 317 Hamap MF_00606 UV DNA damage endonuclease [uvsE]. 12 303 36.74 T 11-10-2018 IPR023520 UV-endonuclease UvdE, bacterial GO:0004519|GO:0009411 ABE28_023035 87f952f0e3ad2d4fdd80ffc3463b324b 317 Gene3D G3DSA:3.20.20.150 2 307 2.7E-93 T 11-10-2018 ABE28_001965 036adabfb47741b9ff04dc443f78bc97 227 Gene3D G3DSA:3.20.20.390 1 227 3.0E-96 T 11-10-2018 IPR038597 GGGP/HepGP synthase superfamily ABE28_001965 036adabfb47741b9ff04dc443f78bc97 227 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 29.06 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 ABE28_001965 036adabfb47741b9ff04dc443f78bc97 227 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 4.1E-74 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 ABE28_001965 036adabfb47741b9ff04dc443f78bc97 227 Pfam PF01884 PcrB family 2 226 3.6E-86 T 11-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 ABE28_001965 036adabfb47741b9ff04dc443f78bc97 227 SUPERFAMILY SSF51395 5 221 4.39E-53 T 11-10-2018 ABE28_014770 548847e70256988d9361321db63ca606 313 Gene3D G3DSA:3.60.15.10 2 304 8.8E-105 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014770 548847e70256988d9361321db63ca606 313 SUPERFAMILY SSF56281 3 304 1.98E-84 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014770 548847e70256988d9361321db63ca606 313 Pfam PF00753 Metallo-beta-lactamase superfamily 26 142 1.2E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_014770 548847e70256988d9361321db63ca606 313 SMART SM00849 18 209 1.2E-5 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_014770 548847e70256988d9361321db63ca606 313 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 40.252 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 ABE28_014770 548847e70256988d9361321db63ca606 313 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 304 5.4E-114 T 11-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 ABE28_016250 98f212bbc00b66caf7be654fc61f31c1 272 Pfam PF01636 Phosphotransferase enzyme family 123 196 2.0E-7 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_016250 98f212bbc00b66caf7be654fc61f31c1 272 Gene3D G3DSA:3.90.1200.10 57 271 3.3E-13 T 11-10-2018 ABE28_016250 98f212bbc00b66caf7be654fc61f31c1 272 SUPERFAMILY SSF56112 8 203 9.2E-14 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 Gene3D G3DSA:3.40.50.720 2 257 1.7E-68 T 11-10-2018 ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 156 184 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 157 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 96 107 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 169 188 3.1E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 188 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 96 107 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 143 159 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 207 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 256 5.9E-46 T 11-10-2018 ABE28_008455 707d03877d300b1cf07cb532c77baa2b 258 SUPERFAMILY SSF51735 6 256 2.87E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019935 5638d7f65ce922bec6195282936c57a3 132 Gene3D G3DSA:2.40.50.660 47 131 6.8E-11 T 11-10-2018 ABE28_019935 5638d7f65ce922bec6195282936c57a3 132 Pfam PF10694 Protein of unknown function (DUF2500) 21 124 3.4E-33 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 ABE28_024150 e26c4e996f8d51211c5a9ecc1552e4f2 348 Gene3D G3DSA:3.40.50.720 1 331 1.0E-29 T 11-10-2018 ABE28_024150 e26c4e996f8d51211c5a9ecc1552e4f2 348 SUPERFAMILY SSF51735 1 318 6.52E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_024150 e26c4e996f8d51211c5a9ecc1552e4f2 348 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 221 1.7E-9 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 SUPERFAMILY SSF52172 1 121 1.42E-27 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 Gene3D G3DSA:2.20.25.10 210 247 3.4E-9 T 11-10-2018 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 SMART SM00448 2 113 2.0E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 Gene3D G3DSA:2.40.50.40 140 209 7.2E-14 T 11-10-2018 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 Pfam PF00072 Response regulator receiver domain 5 113 7.7E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 Pfam PF04397 LytTr DNA-binding domain 149 245 2.8E-27 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 SMART SM00850 149 246 7.0E-34 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_019300 97897be657c4e83f75227cc38cbb7729 247 Gene3D G3DSA:3.40.50.2300 1 127 1.6E-28 T 11-10-2018 ABE28_005040 b605a054af79083608faa4827cd6a114 551 Pfam PF13556 PucR C-terminal helix-turn-helix domain 483 540 2.0E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_005040 b605a054af79083608faa4827cd6a114 551 Pfam PF07905 Purine catabolism regulatory protein-like family 10 123 9.2E-30 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ABE28_005040 b605a054af79083608faa4827cd6a114 551 Gene3D G3DSA:1.10.10.2840 418 545 7.7E-17 T 11-10-2018 ABE28_024205 eed70414b6464ae40fdb9f6836d3cce5 167 Pfam PF10898 Protein of unknown function (DUF2716) 6 149 7.8E-51 T 11-10-2018 IPR020323 Protein of unknown function DUF2716 ABE28_024205 eed70414b6464ae40fdb9f6836d3cce5 167 ProDom PD095338 YXII PLASMID 1 161 4.0E-52 T 11-10-2018 IPR020323 Protein of unknown function DUF2716 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Gene3D G3DSA:2.40.50.140 2 81 8.4E-13 T 11-10-2018 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Pfam PF02565 Recombination protein O C terminal 82 237 2.2E-44 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Gene3D G3DSA:1.20.1440.120 88 225 1.5E-20 T 11-10-2018 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Gene3D G3DSA:3.30.60.100 146 185 1.5E-20 T 11-10-2018 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 243 6.4E-80 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 SUPERFAMILY SSF50249 3 77 4.11E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Pfam PF11967 Recombination protein O N terminal 3 77 9.5E-22 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 29.907 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 ABE28_015400 5ee74eb9c1c7f6bf97115d0eb2526b58 250 SUPERFAMILY SSF57863 81 232 6.28E-49 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger ABE28_021375 30092b50f668eaa883bb10c1bf72410c 328 Gene3D G3DSA:1.10.3470.10 6 327 3.2E-99 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021375 30092b50f668eaa883bb10c1bf72410c 328 Pfam PF01032 FecCD transport family 18 324 3.2E-97 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_021375 30092b50f668eaa883bb10c1bf72410c 328 SUPERFAMILY SSF81345 7 324 1.14E-83 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 802 25.123 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 Gene3D G3DSA:3.40.50.300 252 448 6.8E-78 T 11-10-2018 ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 SUPERFAMILY SSF52540 530 706 2.85E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 SMART SM00490 564 661 3.5E-10 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 TIGRFAM TIGR00595 priA: primosomal protein N' 290 799 1.2E-215 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 SMART SM00487 262 461 5.8E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 SUPERFAMILY SSF52540 246 446 2.05E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 Pfam PF00271 Helicase conserved C-terminal domain 559 660 7.0E-8 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 Pfam PF04851 Type III restriction enzyme, res subunit 264 429 2.6E-17 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 ABE28_007690 842b5f8ee8772ab19571738dd8ee8384 803 Gene3D G3DSA:1.10.8.630 2 113 4.0E-24 T 11-10-2018 ABE28_011150 85f4b5a9dbb0e879c4703590c499ad88 151 SUPERFAMILY SSF55729 1 151 4.46E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_011150 85f4b5a9dbb0e879c4703590c499ad88 151 Pfam PF00583 Acetyltransferase (GNAT) family 37 129 3.5E-14 T 11-10-2018 IPR000182 GNAT domain ABE28_011150 85f4b5a9dbb0e879c4703590c499ad88 151 Gene3D G3DSA:3.40.630.30 1 151 4.9E-43 T 11-10-2018 ABE28_019200 fea28610c318f473b4a568f85440ea99 402 SUPERFAMILY SSF103473 8 385 2.75E-57 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019200 fea28610c318f473b4a568f85440ea99 402 Pfam PF07690 Major Facilitator Superfamily 13 233 1.3E-29 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_019200 fea28610c318f473b4a568f85440ea99 402 Gene3D G3DSA:1.20.1250.20 5 386 6.2E-56 T 11-10-2018 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Gene3D G3DSA:3.40.140.20 203 360 9.8E-61 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 SMART SM00851 14 129 2.1E-52 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 SUPERFAMILY SSF52335 2 193 1.7E-68 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 SMART SM00798 134 446 5.4E-200 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 SUPERFAMILY SSF53927 207 511 2.01E-126 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 PIRSF PIRSF000414 1 511 1.6E-212 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 4.7E-233 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Gene3D G3DSA:3.40.50.1380 1 197 2.2E-86 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 3.8E-119 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 44.278 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Pfam PF02142 MGS-like domain 14 129 1.3E-28 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_001935 bea76594b7281176d7b20ad1b07706ce 511 Gene3D G3DSA:3.40.140.20 380 511 1.1E-55 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_010185 157e1ea142d80da80255db7afb4d56be 194 Pfam PF01810 LysE type translocator 12 192 1.4E-13 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 Pfam PF03129 Anticodon binding domain 347 420 5.8E-11 T 11-10-2018 IPR004154 Anticodon-binding ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 SUPERFAMILY SSF52954 344 421 1.13E-16 T 11-10-2018 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 Pfam PF13393 Histidyl-tRNA synthetase 11 327 2.5E-37 T 11-10-2018 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 Gene3D G3DSA:3.40.50.800 340 424 9.8E-20 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 SUPERFAMILY SSF55681 6 333 2.68E-70 T 11-10-2018 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 420 3.5E-104 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 Gene3D G3DSA:3.30.930.10 1 336 1.7E-97 T 11-10-2018 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 PIRSF PIRSF001549 2 427 8.4E-111 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 ABE28_004445 6907959fcb3f99f831cdac4f9517d0c9 429 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 428 23.263 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 Pfam PF07687 Peptidase dimerisation domain 179 270 6.9E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 Gene3D G3DSA:3.40.630.10 11 363 1.8E-130 T 11-10-2018 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 PIRSF PIRSF005962 1 379 1.4E-119 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 Pfam PF01546 Peptidase family M20/M25/M40 66 376 9.9E-30 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 SUPERFAMILY SSF55031 175 293 4.19E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 SUPERFAMILY SSF53187 3 378 6.0E-73 T 11-10-2018 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 Gene3D G3DSA:3.30.70.360 175 289 1.8E-130 T 11-10-2018 ABE28_002810 1de9eeec25f959d660a5aea0bb9fd1d3 379 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 365 1.3E-110 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_004350 e3f40282a825d6174e6e992123b1b1db 141 Gene3D G3DSA:3.40.140.10 9 141 5.7E-32 T 11-10-2018 ABE28_004350 e3f40282a825d6174e6e992123b1b1db 141 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 59 107 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_004350 e3f40282a825d6174e6e992123b1b1db 141 SUPERFAMILY SSF53927 12 139 4.43E-25 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_004350 e3f40282a825d6174e6e992123b1b1db 141 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 13 115 2.0E-8 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 546 7.3E-169 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 Pfam PF00733 Asparagine synthase 239 609 4.3E-104 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 Pfam PF13537 Glutamine amidotransferase domain 51 168 4.0E-45 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 SUPERFAMILY SSF52402 231 604 5.35E-85 T 11-10-2018 ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 Gene3D G3DSA:3.60.20.10 5 189 1.0E-62 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 SUPERFAMILY SSF56235 1 224 3.0E-61 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_008660 be4b0f9e272b82d0f465f0a98112b42f 629 PIRSF PIRSF001589 1 627 1.9E-192 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 Pfam PF02926 THUMP domain 37 162 3.4E-19 T 11-10-2018 IPR004114 THUMP domain GO:0003723 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 SUPERFAMILY SSF143437 3 173 5.06E-49 T 11-10-2018 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 Gene3D G3DSA:3.40.50.620 175 403 3.0E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_017225 582e0d8355224a2e2556431b17574fff 403 SMART SM00981 74 165 1.0E-22 T 11-10-2018 IPR004114 THUMP domain GO:0003723 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 371 6.2E-66 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 372 1.7E-124 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 Gene3D G3DSA:3.30.2130.30 1 174 3.7E-54 T 11-10-2018 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 SUPERFAMILY SSF52402 175 387 1.39E-50 T 11-10-2018 ABE28_017225 582e0d8355224a2e2556431b17574fff 403 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 403 153.714 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 ABE28_003950 ecdbafe3d5ceb77ac8c98dc9a5fd116c 525 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 42 500 3.4E-188 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_003950 ecdbafe3d5ceb77ac8c98dc9a5fd116c 525 PIRSF PIRSF005690 27 515 2.4E-176 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_010845 3caaa0a0ca562cd61be3c3e63bf0855d 143 SUPERFAMILY SSF159888 12 132 5.62E-7 T 11-10-2018 ABE28_010845 3caaa0a0ca562cd61be3c3e63bf0855d 143 Pfam PF08818 Domain of unknown function (DU1801) 25 129 6.0E-13 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ABE28_001970 b8471ded694445dff3e278875a109854 748 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 3.0E-85 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 ABE28_001970 b8471ded694445dff3e278875a109854 748 Pfam PF13361 UvrD-like helicase C-terminal domain 280 619 2.1E-76 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABE28_001970 b8471ded694445dff3e278875a109854 748 SUPERFAMILY SSF52540 1 647 6.02E-192 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001970 b8471ded694445dff3e278875a109854 748 Gene3D G3DSA:1.10.486.10 386 550 1.1E-132 T 11-10-2018 ABE28_001970 b8471ded694445dff3e278875a109854 748 Gene3D G3DSA:1.10.10.160 116 190 6.5E-110 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily ABE28_001970 b8471ded694445dff3e278875a109854 748 Gene3D G3DSA:3.40.50.300 283 637 1.1E-132 T 11-10-2018 ABE28_001970 b8471ded694445dff3e278875a109854 748 Gene3D G3DSA:3.40.50.300 12 277 6.5E-110 T 11-10-2018 ABE28_001970 b8471ded694445dff3e278875a109854 748 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 746 0.0 T 11-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 ABE28_019675 de9b68fdb72286211f3358d448b71873 121 Gene3D G3DSA:2.60.120.10 2 111 3.5E-36 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_019675 de9b68fdb72286211f3358d448b71873 121 SUPERFAMILY SSF51182 4 108 5.86E-25 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_019675 de9b68fdb72286211f3358d448b71873 121 Pfam PF07883 Cupin domain 41 91 1.8E-10 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_005255 460cd6f9249f1df51db1de9db7989d97 435 TIGRFAM TIGR00784 citMHS: citrate transporter 1 434 6.8E-166 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 ABE28_005255 460cd6f9249f1df51db1de9db7989d97 435 Pfam PF03600 Citrate transporter 14 377 1.2E-44 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABE28_015160 4c408db10288606a57faeeb093122e44 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 4.0E-12 T 11-10-2018 IPR024490 Protein of unknown function DUF2759 ABE28_015160 4c408db10288606a57faeeb093122e44 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 1.7E-22 T 11-10-2018 IPR024490 Protein of unknown function DUF2759 ABE28_021935 cac1f9039704144f9f93b29244dc06da 315 Pfam PF01497 Periplasmic binding protein 60 291 1.9E-37 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_021935 cac1f9039704144f9f93b29244dc06da 315 Gene3D G3DSA:3.40.50.12250 44 296 2.4E-103 T 11-10-2018 ABE28_021935 cac1f9039704144f9f93b29244dc06da 315 SUPERFAMILY SSF53807 39 302 2.71E-71 T 11-10-2018 ABE28_021935 cac1f9039704144f9f93b29244dc06da 315 Gene3D G3DSA:3.40.50.12260 187 288 2.4E-103 T 11-10-2018 ABE28_005050 e5eff15e0a0bb384b0920aba7ba563c7 254 Gene3D G3DSA:2.60.120.10 1 254 2.2E-84 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_005050 e5eff15e0a0bb384b0920aba7ba563c7 254 Pfam PF07883 Cupin domain 179 239 1.2E-6 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_005050 e5eff15e0a0bb384b0920aba7ba563c7 254 SUPERFAMILY SSF51182 9 253 4.3E-59 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_005050 e5eff15e0a0bb384b0920aba7ba563c7 254 TIGRFAM TIGR03214 ura-cupin: putative allantoin catabolism protein 2 253 4.6E-100 T 11-10-2018 IPR017627 Conserved hypothetical protein CHP03214, putative allantoin-urate catabolism protein KEGG: 00230+3.5.3.26|MetaCyc: PWY-5692|MetaCyc: PWY-5698 ABE28_012425 755fe9d11ba8cdaccfc6975f037c8a9c 332 Pfam PF03060 Nitronate monooxygenase 85 309 6.7E-25 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_012425 755fe9d11ba8cdaccfc6975f037c8a9c 332 Gene3D G3DSA:3.20.20.70 11 329 1.2E-66 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_012425 755fe9d11ba8cdaccfc6975f037c8a9c 332 SUPERFAMILY SSF51412 12 294 5.49E-52 T 11-10-2018 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 Pfam PF12697 Alpha/beta hydrolase family 31 267 1.5E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 SUPERFAMILY SSF53474 11 275 7.04E-60 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00412 Epoxide hydrolase signature 35 53 9.1E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00412 Epoxide hydrolase signature 99 112 9.1E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00412 Epoxide hydrolase signature 251 273 9.1E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.0E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 1.0E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 220 234 1.0E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.0E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_021350 77416c49dddd454a28ef83682e12e976 286 Gene3D G3DSA:3.40.50.1820 3 282 7.8E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_002045 20b9386c5844a9c4de53e6535aefb328 286 Pfam PF07870 Protein of unknown function (DUF1657) 238 280 4.1E-16 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 ABE28_002045 20b9386c5844a9c4de53e6535aefb328 286 Gene3D G3DSA:3.30.240.20 81 154 4.6E-24 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_002045 20b9386c5844a9c4de53e6535aefb328 286 Gene3D G3DSA:3.30.240.20 170 228 3.9E-13 T 11-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily ABE28_002045 20b9386c5844a9c4de53e6535aefb328 286 Pfam PF04239 Protein of unknown function (DUF421) 89 203 5.8E-31 T 11-10-2018 IPR007353 Protein of unknown function DUF421 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 SUPERFAMILY SSF48498 89 203 6.82E-14 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 Gene3D G3DSA:1.10.357.10 63 204 2.4E-21 T 11-10-2018 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 SUPERFAMILY SSF46689 9 79 1.95E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 Gene3D G3DSA:1.10.10.60 16 62 3.4E-14 T 11-10-2018 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 65 7.6E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 5.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018255 e6bd0126381abdcea7716b698c115f68 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 5.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 49.904 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 Gene3D G3DSA:3.40.640.10 84 349 1.1E-163 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 SUPERFAMILY SSF53383 3 443 3.35E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 Pfam PF02347 Glycine cleavage system P-protein 3 442 1.5E-160 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 Gene3D G3DSA:3.90.1150.10 73 443 1.1E-163 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_015075 4e91801923754ccc1cc3eb77b741202d 448 PIRSF PIRSF006815 3 447 1.5E-189 T 11-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Gene3D G3DSA:1.10.101.10 253 318 5.1E-15 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Gene3D G3DSA:1.10.101.10 184 252 6.2E-10 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 86 144 2.1E-15 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 SUPERFAMILY SSF55166 20 148 5.49E-26 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 SUPERFAMILY SSF47090 253 317 4.97E-15 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Pfam PF01471 Putative peptidoglycan binding domain 193 251 8.9E-5 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Pfam PF01471 Putative peptidoglycan binding domain 268 316 2.4E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 Gene3D G3DSA:3.30.1380.10 7 145 1.3E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_011090 1d89743fb4cda4d017d9a90ed9c281b2 318 SUPERFAMILY SSF47090 184 251 1.18E-6 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 Gene3D G3DSA:3.90.180.10 113 332 3.5E-38 T 11-10-2018 ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 SUPERFAMILY SSF50129 1 167 6.67E-13 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 Pfam PF00107 Zinc-binding dehydrogenase 168 282 1.8E-24 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 SUPERFAMILY SSF51735 136 270 4.06E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 Gene3D G3DSA:3.90.180.10 1 110 1.4E-5 T 11-10-2018 ABE28_006455 71edfc78f478f50fa1c23921481e52e6 352 Gene3D G3DSA:3.40.50.720 146 281 3.5E-38 T 11-10-2018 ABE28_004355 ab51360738ef7d494c117cdc8e8249b8 265 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 69 264 1.2E-55 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_004355 ab51360738ef7d494c117cdc8e8249b8 265 Pfam PF10370 Domain of unknown function (DUF2437) 9 62 4.1E-5 T 11-10-2018 IPR018833 Domain of unknown function DUF2437 ABE28_004355 ab51360738ef7d494c117cdc8e8249b8 265 Gene3D G3DSA:3.90.850.10 35 265 5.0E-72 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_004355 ab51360738ef7d494c117cdc8e8249b8 265 SUPERFAMILY SSF56529 61 265 4.45E-67 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 248 341 1.8E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SUPERFAMILY SSF158472 79 122 9.42E-8 T 11-10-2018 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Gene3D G3DSA:3.30.565.10 205 356 4.7E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SUPERFAMILY SSF47384 118 200 7.85E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Gene3D G3DSA:1.20.1480.50 44 127 7.9E-9 T 11-10-2018 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Pfam PF00672 HAMP domain 79 121 6.2E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 PRINTS PR01780 Lantibiotic regulatory protein signature 184 201 5.5E-6 T 11-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 PRINTS PR01780 Lantibiotic regulatory protein signature 307 322 5.5E-6 T 11-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 PRINTS PR01780 Lantibiotic regulatory protein signature 142 158 5.5E-6 T 11-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Gene3D G3DSA:1.10.287.130 128 204 1.2E-21 T 11-10-2018 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SMART SM00387 246 356 1.4E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SMART SM00304 73 125 0.0055 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 198 2.1E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SUPERFAMILY SSF55874 204 354 1.86E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_009440 97826e7a74a58dcea282d3c4c2671be4 356 SMART SM00388 133 200 3.4E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 SUPERFAMILY SSF54106 27 69 1.83E-10 T 11-10-2018 ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Gene3D G3DSA:3.10.350.10 25 72 6.1E-17 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Gene3D G3DSA:3.10.350.10 73 121 6.0E-19 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Pfam PF06725 3D domain 211 271 9.9E-22 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Gene3D G3DSA:2.40.40.10 122 263 2.2E-7 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 SUPERFAMILY SSF54106 73 115 9.81E-12 T 11-10-2018 ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 SMART SM00257 73 116 8.5E-15 T 11-10-2018 IPR018392 LysM domain ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 SMART SM00257 26 69 5.6E-13 T 11-10-2018 IPR018392 LysM domain ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 SUPERFAMILY SSF50685 212 259 4.88E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Pfam PF01476 LysM domain 74 115 2.3E-13 T 11-10-2018 IPR018392 LysM domain ABE28_012825 25e9fea6dc46df69797fb11e8b1d9fd7 271 Pfam PF01476 LysM domain 28 68 2.7E-13 T 11-10-2018 IPR018392 LysM domain ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 SUPERFAMILY SSF51735 6 221 5.14E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 Pfam PF00106 short chain dehydrogenase 7 198 2.8E-48 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 Gene3D G3DSA:3.40.50.720 3 235 5.7E-69 T 11-10-2018 ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 197 217 2.5E-31 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019665 9d715f34fddb5477af5dbad18f40e0d4 235 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.4E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 Gene3D G3DSA:3.20.20.70 1 215 2.8E-91 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 200 2.0E-87 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 3 213 2.1E-93 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 SUPERFAMILY SSF51366 1 213 5.38E-76 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_007730 5bc518ad70b955915994af5c31fb724a 215 PIRSF PIRSF001461 1 215 1.5E-96 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 ABE28_004075 ea5509f75844e623b8d45a885c7bd13d 501 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 4 492 54.148 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABE28_004075 ea5509f75844e623b8d45a885c7bd13d 501 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 8 490 4.3E-221 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABE28_004075 ea5509f75844e623b8d45a885c7bd13d 501 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 7 492 2.4E-241 T 11-10-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 ABE28_004075 ea5509f75844e623b8d45a885c7bd13d 501 SUPERFAMILY SSF51905 6 322 8.29E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 2.8E-68 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 Gene3D G3DSA:3.30.390.30 353 473 5.6E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 Gene3D G3DSA:3.50.50.60 163 285 1.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 SUPERFAMILY SSF51905 3 378 1.2E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PIRSF PIRSF000350 2 468 4.3E-85 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 SUPERFAMILY SSF55424 350 472 6.87E-41 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 6.3E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 4.7E-36 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 4.7E-36 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 4.7E-36 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 4.7E-36 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 4.7E-36 T 11-10-2018 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 2.7E-38 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 Gene3D G3DSA:3.50.50.60 5 339 1.1E-112 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_014870 4cb8ee770a2d61267d77e174963b02ca 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.6E-178 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 ABE28_018070 8ea052675bddd63216255eb784aa238f 276 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 272 1.0E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_018070 8ea052675bddd63216255eb784aa238f 276 SMART SM00079 49 272 0.0029 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_018070 8ea052675bddd63216255eb784aa238f 276 SUPERFAMILY SSF53850 1 273 2.56E-72 T 11-10-2018 ABE28_018070 8ea052675bddd63216255eb784aa238f 276 SMART SM00062 49 273 3.5E-65 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_018070 8ea052675bddd63216255eb784aa238f 276 Gene3D G3DSA:3.40.190.10 48 273 7.9E-69 T 11-10-2018 ABE28_018070 8ea052675bddd63216255eb784aa238f 276 Gene3D G3DSA:3.40.190.10 134 231 7.9E-69 T 11-10-2018 ABE28_013405 2e83e02bfe3d8ff74eadbd839a893ba6 259 Gene3D G3DSA:3.40.50.150 73 257 2.5E-38 T 11-10-2018 ABE28_013405 2e83e02bfe3d8ff74eadbd839a893ba6 259 SUPERFAMILY SSF53335 3 256 2.92E-52 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_013405 2e83e02bfe3d8ff74eadbd839a893ba6 259 Pfam PF04445 Putative SAM-dependent methyltransferase 39 233 2.1E-16 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 ABE28_013170 4cb41c8f388a04d0c56856c6397a44dc 295 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 62 204 9.6E-31 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_013170 4cb41c8f388a04d0c56856c6397a44dc 295 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 62 204 9.0E-41 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_013170 4cb41c8f388a04d0c56856c6397a44dc 295 Gene3D G3DSA:1.10.260.150 41 295 1.4E-66 T 11-10-2018 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 PIRSF PIRSF001456 1 382 3.6E-131 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 SUPERFAMILY SSF103263 1 388 1.31E-148 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 Gene3D G3DSA:3.60.150.10 1 390 2.6E-153 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 368 9.5E-130 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.311 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 Pfam PF01264 Chorismate synthase 1 364 2.5E-124 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014255 cf3ac2c59a77a878d69ad69640e88849 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 ABE28_014015 c7a070be9bd4df2161ded8a88102b26e 153 Pfam PF00011 Hsp20/alpha crystallin family 54 146 1.8E-10 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ABE28_014015 c7a070be9bd4df2161ded8a88102b26e 153 Gene3D G3DSA:2.60.40.790 6 153 1.3E-23 T 11-10-2018 IPR008978 HSP20-like chaperone ABE28_014015 c7a070be9bd4df2161ded8a88102b26e 153 SUPERFAMILY SSF49764 42 149 5.49E-19 T 11-10-2018 IPR008978 HSP20-like chaperone ABE28_012040 de9a5793e0eb9f03fdab7c5a6c0a53c4 194 Pfam PF10842 Protein of unknown function (DUF2642) 141 187 5.9E-6 T 11-10-2018 IPR020139 Protein of unknown function DUF2642 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 127 139 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 111 127 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 97 111 8.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 Pfam PF00196 Bacterial regulatory proteins, luxR family 97 151 2.2E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 SMART SM00421 94 151 1.0E-13 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 SUPERFAMILY SSF55781 13 83 3.64E-6 T 11-10-2018 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 SUPERFAMILY SSF46894 85 157 1.77E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 Gene3D G3DSA:3.30.450.40 11 87 5.4E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_012175 a5763e5e5ebd53ef47b99e272d138297 158 Gene3D G3DSA:1.10.10.10 88 158 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006205 892fd9f305cb278a982dbdebe8e47e46 299 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006205 892fd9f305cb278a982dbdebe8e47e46 299 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 25 297 3.3E-67 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006205 892fd9f305cb278a982dbdebe8e47e46 299 Pfam PF00849 RNA pseudouridylate synthase 93 243 1.1E-24 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006205 892fd9f305cb278a982dbdebe8e47e46 299 SUPERFAMILY SSF55120 77 297 2.34E-65 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_006205 892fd9f305cb278a982dbdebe8e47e46 299 Gene3D G3DSA:3.30.2350.10 85 299 1.3E-62 T 11-10-2018 ABE28_017220 60534f13cc2c2806fa38ccfed1187582 68 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_017220 60534f13cc2c2806fa38ccfed1187582 68 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 2.2E-23 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_017220 60534f13cc2c2806fa38ccfed1187582 68 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_017220 60534f13cc2c2806fa38ccfed1187582 68 Gene3D G3DSA:1.10.8.910 8 68 6.7E-32 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily ABE28_016860 a591367f1425658400ee40c5d9497c84 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 9.9E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.949 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 SUPERFAMILY SSF143034 2 62 1.03E-21 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 7.8E-23 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 Gene3D G3DSA:2.40.50.530 1 63 1.9E-21 T 11-10-2018 ABE28_016860 a591367f1425658400ee40c5d9497c84 66 Pfam PF01632 Ribosomal protein L35 2 62 3.9E-25 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015720 ae4c3627c307f99926c69f7d7f8cdc86 224 SUPERFAMILY SSF53335 12 220 6.03E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015720 ae4c3627c307f99926c69f7d7f8cdc86 224 Pfam PF01596 O-methyltransferase 20 218 1.8E-32 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ABE28_015720 ae4c3627c307f99926c69f7d7f8cdc86 224 Gene3D G3DSA:3.40.50.150 5 224 1.3E-66 T 11-10-2018 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 Gene3D G3DSA:3.40.50.10300 187 400 5.2E-86 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 SUPERFAMILY SSF52507 3 179 3.79E-63 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 394 4.2E-154 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 Gene3D G3DSA:3.40.50.1950 1 186 1.3E-63 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 SUPERFAMILY SSF102645 185 396 1.18E-77 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 Pfam PF02441 Flavoprotein 5 177 6.0E-49 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ABE28_007685 ffde6aa2453575e8d23f0a484542a43e 400 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 368 2.8E-73 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 ABE28_004665 94b03bc220dfe9e697709e737a191bd5 264 Gene3D G3DSA:3.40.50.1820 35 246 1.5E-12 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004665 94b03bc220dfe9e697709e737a191bd5 264 Pfam PF16929 Accessory Sec system GspB-transporter 44 228 2.8E-10 T 11-10-2018 IPR022267 Accessory Sec system protein Asp2 GO:0015031 ABE28_004665 94b03bc220dfe9e697709e737a191bd5 264 SUPERFAMILY SSF53474 23 252 2.58E-10 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 Gene3D G3DSA:2.40.50.940 226 344 1.0E-11 T 11-10-2018 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 38 314 1.2E-108 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 SMART SM00382 32 215 2.8E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 SUPERFAMILY SSF50331 240 345 8.5E-12 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 Pfam PF00005 ABC transporter 23 165 4.9E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 Gene3D G3DSA:3.40.50.300 6 225 1.2E-69 T 11-10-2018 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 Pfam PF08402 TOBE domain 277 345 3.7E-8 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 SUPERFAMILY SSF52540 6 247 3.82E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001060 9f532af852cadbb297c6cc9c8594293d 369 Gene3D G3DSA:2.40.50.140 283 337 1.0E-11 T 11-10-2018 ABE28_016340 33e9646f2a199104ef3379bc7f024fc1 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 1.5E-39 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016340 33e9646f2a199104ef3379bc7f024fc1 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 26.888 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016340 33e9646f2a199104ef3379bc7f024fc1 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_016340 33e9646f2a199104ef3379bc7f024fc1 102 SUPERFAMILY SSF141091 1 101 6.8E-38 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016340 33e9646f2a199104ef3379bc7f024fc1 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 1.0E-39 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 SUPERFAMILY SSF100950 2 212 1.62E-72 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 2 207 2.5E-95 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 42 50 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 Gene3D G3DSA:3.40.1080.10 1 212 6.8E-101 T 11-10-2018 ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 Pfam PF01144 Coenzyme A transferase 7 198 8.0E-46 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018495 c104946d5f7f57ac97cd83faa321b784 215 SMART SM00882 4 200 7.7E-76 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 Gene3D G3DSA:3.40.50.300 5 248 3.5E-77 T 11-10-2018 ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 Pfam PF08402 TOBE domain 295 369 8.3E-7 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 SMART SM00382 38 221 6.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 SUPERFAMILY SSF50331 247 369 9.07E-13 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 Pfam PF00005 ABC transporter 29 171 3.2E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_011685 f8f2e6e4bf8e9bc396588394b1ed8bb7 372 SUPERFAMILY SSF52540 14 252 8.18E-87 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005725 c738ec36502b08aa790d2997ffd29582 180 SMART SM00347 35 123 0.0028 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_005725 c738ec36502b08aa790d2997ffd29582 180 SUPERFAMILY SSF46785 6 146 2.54E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005725 c738ec36502b08aa790d2997ffd29582 180 Gene3D G3DSA:1.10.10.10 1 153 2.2E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023995 9d27d3940dfe2bc7accad911ba61bb47 154 SUPERFAMILY SSF54593 9 128 1.65E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_023995 9d27d3940dfe2bc7accad911ba61bb47 154 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 126 3.7E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_023995 9d27d3940dfe2bc7accad911ba61bb47 154 Gene3D G3DSA:3.10.180.10 5 129 5.0E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_023865 0dd871bbd5053189cab929c24a5c3475 355 Gene3D G3DSA:3.20.20.70 1 355 2.2E-121 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_023865 0dd871bbd5053189cab929c24a5c3475 355 SUPERFAMILY SSF51395 1 353 1.08E-107 T 11-10-2018 ABE28_023865 0dd871bbd5053189cab929c24a5c3475 355 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 1.2E-74 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABE28_007090 670302cb9ea86f1442d83c65e7813bcd 145 Pfam PF00571 CBS domain 86 138 1.9E-4 T 11-10-2018 IPR000644 CBS domain ABE28_007090 670302cb9ea86f1442d83c65e7813bcd 145 SUPERFAMILY SSF54631 13 139 1.3E-26 T 11-10-2018 ABE28_007090 670302cb9ea86f1442d83c65e7813bcd 145 Gene3D G3DSA:3.10.580.10 1 143 1.5E-53 T 11-10-2018 ABE28_005540 e454c047d4e4b54d6a28413856171fb1 361 Gene3D G3DSA:3.40.50.1970 4 159 4.3E-24 T 11-10-2018 ABE28_005540 e454c047d4e4b54d6a28413856171fb1 361 Gene3D G3DSA:1.20.1090.10 161 361 2.7E-59 T 11-10-2018 ABE28_005540 e454c047d4e4b54d6a28413856171fb1 361 PIRSF PIRSF000112 1 361 1.2E-103 T 11-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 ABE28_005540 e454c047d4e4b54d6a28413856171fb1 361 Pfam PF00465 Iron-containing alcohol dehydrogenase 18 339 1.3E-42 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABE28_005540 e454c047d4e4b54d6a28413856171fb1 361 SUPERFAMILY SSF56796 17 356 4.84E-55 T 11-10-2018 ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 SUPERFAMILY SSF161098 292 554 2.9E-56 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 274 3.6E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 370 550 1.5E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 SUPERFAMILY SSF161098 5 277 1.03E-55 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 Gene3D G3DSA:1.10.3720.10 8 279 1.4E-64 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002860 838bdb4bcf980df6af52e45718998a16 562 Gene3D G3DSA:1.10.3720.10 294 559 8.4E-57 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022090 ed4c8b282e420b3c765faf52d9dafa45 77 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 1.8E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABE28_022090 ed4c8b282e420b3c765faf52d9dafa45 77 PRINTS PR01651 Protein-export SecG membrane protein signature 56 77 1.8E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABE28_022090 ed4c8b282e420b3c765faf52d9dafa45 77 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 1.8E-12 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABE28_022090 ed4c8b282e420b3c765faf52d9dafa45 77 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 7.7E-23 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABE28_022090 ed4c8b282e420b3c765faf52d9dafa45 77 Pfam PF03840 Preprotein translocase SecG subunit 4 74 6.7E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 ABE28_010395 258150ebecb210080566a91c562a4b77 587 Gene3D G3DSA:3.40.50.970 374 567 7.4E-57 T 11-10-2018 ABE28_010395 258150ebecb210080566a91c562a4b77 587 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 201 337 2.1E-36 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABE28_010395 258150ebecb210080566a91c562a4b77 587 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 404 551 2.5E-40 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_010395 258150ebecb210080566a91c562a4b77 587 SUPERFAMILY SSF52518 381 564 4.13E-56 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_010395 258150ebecb210080566a91c562a4b77 587 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 2.4E-47 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_010395 258150ebecb210080566a91c562a4b77 587 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 441 460 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABE28_010395 258150ebecb210080566a91c562a4b77 587 SUPERFAMILY SSF52518 10 188 1.18E-46 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_010395 258150ebecb210080566a91c562a4b77 587 SUPERFAMILY SSF52467 197 386 2.46E-40 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_010395 258150ebecb210080566a91c562a4b77 587 Gene3D G3DSA:3.40.50.1220 198 373 1.2E-44 T 11-10-2018 ABE28_010395 258150ebecb210080566a91c562a4b77 587 Gene3D G3DSA:3.40.50.970 5 190 2.4E-54 T 11-10-2018 ABE28_010395 258150ebecb210080566a91c562a4b77 587 TIGRFAM TIGR03457 sulphoacet_xsc: sulfoacetaldehyde acetyltransferase 13 577 7.2E-253 T 11-10-2018 IPR017820 Sulphoacetaldehyde acetyltransferase GO:0000287|GO:0005737|GO:0019529|GO:0030976|GO:0050487 KEGG: 00430+2.3.3.15|MetaCyc: PWY-1281|MetaCyc: PWY-6637 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 Gene3D G3DSA:1.10.1790.10 289 388 2.7E-14 T 11-10-2018 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 SUPERFAMILY SSF52794 398 482 9.42E-5 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 Gene3D G3DSA:3.40.930.10 536 687 3.2E-52 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 SUPERFAMILY SSF55804 538 680 1.57E-33 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 Gene3D G3DSA:3.40.50.2300 398 484 8.6E-6 T 11-10-2018 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 Pfam PF00874 PRD domain 297 386 6.8E-19 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 541 679 2.2E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_019280 b2874942cc38a7fb713b13430c4bb5e1 688 SUPERFAMILY SSF63520 268 391 7.19E-22 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 SUPERFAMILY SSF52343 449 604 3.27E-49 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 7 604 1.6E-257 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 SUPERFAMILY SSF63380 230 450 8.79E-60 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PIRSF PIRSF000207 1 604 1.9E-257 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Pfam PF00175 Oxidoreductase NAD-binding domain 462 568 4.9E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Gene3D G3DSA:3.40.50.80 450 604 1.3E-57 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Gene3D G3DSA:2.40.30.10 232 444 2.5E-67 T 11-10-2018 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Pfam PF00258 Flavodoxin 69 193 1.6E-34 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Gene3D G3DSA:3.40.50.360 58 218 8.9E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 SUPERFAMILY SSF52218 65 213 1.28E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 461 480 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 391 398 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 486 495 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 499 510 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 530 546 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 553 561 2.6E-26 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00369 Flavodoxin signature 68 81 2.6E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00369 Flavodoxin signature 116 127 2.6E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00369 Flavodoxin signature 172 191 2.6E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 PRINTS PR00369 Flavodoxin signature 148 158 2.6E-16 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Gene3D G3DSA:1.20.990.10 280 389 2.5E-67 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 ABE28_010910 f3d319ce32e5eafb977c0ff229ce0dab 604 Pfam PF00667 FAD binding domain 233 427 5.9E-31 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 ABE28_004985 02b62fed3144dac691e3ec3242f8f872 176 Hamap MF_00269 Thiol peroxidase [tpx]. 8 169 35.108 T 11-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_004985 02b62fed3144dac691e3ec3242f8f872 176 ProSitePatterns PS01265 Tpx family signature. 89 100 - T 11-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_004985 02b62fed3144dac691e3ec3242f8f872 176 Gene3D G3DSA:3.40.30.10 4 173 7.0E-46 T 11-10-2018 ABE28_004985 02b62fed3144dac691e3ec3242f8f872 176 Pfam PF00578 AhpC/TSA family 25 148 1.6E-19 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_004985 02b62fed3144dac691e3ec3242f8f872 176 SUPERFAMILY SSF52833 8 166 6.2E-41 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 SUPERFAMILY SSF51735 5 137 4.36E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 Gene3D G3DSA:3.30.70.1450 139 216 2.0E-24 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 Gene3D G3DSA:3.40.50.720 2 138 5.6E-38 T 11-10-2018 ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 Pfam PF02080 TrkA-C domain 159 216 2.1E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 SUPERFAMILY SSF116726 133 216 2.62E-19 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_020180 faffa54cdf96bb9e5f2f091e0f4527be 218 Pfam PF02254 TrkA-N domain 6 121 2.5E-30 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABE28_009955 bdfc5ba2a72be12c90d38124143913bf 218 SUPERFAMILY SSF53041 1 148 5.62E-26 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABE28_009955 bdfc5ba2a72be12c90d38124143913bf 218 SMART SM00857 3 149 3.8E-33 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_009955 bdfc5ba2a72be12c90d38124143913bf 218 Pfam PF00239 Resolvase, N terminal domain 3 147 6.8E-24 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_009955 bdfc5ba2a72be12c90d38124143913bf 218 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ABE28_009955 bdfc5ba2a72be12c90d38124143913bf 218 Gene3D G3DSA:3.40.50.1390 1 158 3.0E-27 T 11-10-2018 ABE28_010735 66eb70dcba8f7bcce6e7872000cee85a 98 SUPERFAMILY SSF89360 1 93 9.94E-12 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_010735 66eb70dcba8f7bcce6e7872000cee85a 98 PIRSF PIRSF034852 1 96 2.8E-37 T 11-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 ABE28_010735 66eb70dcba8f7bcce6e7872000cee85a 98 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 92 2.5E-9 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABE28_003760 8eac4e2d2621f9122c74b24de8560eda 255 SUPERFAMILY SSF52540 5 237 1.69E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003760 8eac4e2d2621f9122c74b24de8560eda 255 SMART SM00382 33 210 2.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003760 8eac4e2d2621f9122c74b24de8560eda 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_003760 8eac4e2d2621f9122c74b24de8560eda 255 Pfam PF00005 ABC transporter 24 160 3.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003760 8eac4e2d2621f9122c74b24de8560eda 255 Gene3D G3DSA:3.40.50.300 2 244 2.5E-60 T 11-10-2018 ABE28_006350 821b5db4c547431a06d92297a690bf45 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 7 171 2.1E-48 T 11-10-2018 IPR006286 Deglycase PfpI ABE28_006350 821b5db4c547431a06d92297a690bf45 174 Pfam PF01965 DJ-1/PfpI family 6 168 1.5E-45 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_006350 821b5db4c547431a06d92297a690bf45 174 Gene3D G3DSA:3.40.50.880 2 174 2.6E-48 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_006350 821b5db4c547431a06d92297a690bf45 174 SUPERFAMILY SSF52317 5 171 4.74E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_003685 e37339aa422ab3b80be641099772b5c8 212 SUPERFAMILY SSF51230 40 112 1.83E-9 T 11-10-2018 IPR011053 Single hybrid motif ABE28_003685 e37339aa422ab3b80be641099772b5c8 212 Gene3D G3DSA:2.40.30.170 113 211 2.9E-16 T 11-10-2018 ABE28_003685 e37339aa422ab3b80be641099772b5c8 212 Gene3D G3DSA:2.40.50.100 44 112 2.9E-10 T 11-10-2018 ABE28_003685 e37339aa422ab3b80be641099772b5c8 212 Pfam PF13437 HlyD family secretion protein 85 202 1.8E-11 T 11-10-2018 ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 Pfam PF00271 Helicase conserved C-terminal domain 360 466 1.5E-20 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 SMART SM00490 386 466 5.6E-19 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 Pfam PF00176 SNF2 family N-terminal domain 79 297 3.6E-35 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 Gene3D G3DSA:3.40.50.10810 61 261 3.4E-41 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 SMART SM00487 56 235 5.6E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 SUPERFAMILY SSF52540 11 239 3.13E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 SUPERFAMILY SSF52540 168 518 1.0E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015085 c56c19dc989ea6e7f99e3278d5070242 562 Gene3D G3DSA:3.40.50.300 271 548 2.2E-51 T 11-10-2018 ABE28_014420 9ed61fdf7fc8bc4830efc0423bfc4637 271 SUPERFAMILY SSF56300 42 256 2.62E-29 T 11-10-2018 ABE28_014420 9ed61fdf7fc8bc4830efc0423bfc4637 271 Gene3D G3DSA:3.60.21.10 46 234 2.8E-21 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_014420 9ed61fdf7fc8bc4830efc0423bfc4637 271 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 48 206 9.5E-12 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 ABE28_017425 dc08a7b32535e27948b073b9ae54f8c2 212 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.692 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABE28_017425 dc08a7b32535e27948b073b9ae54f8c2 212 Pfam PF02390 Putative methyltransferase 39 207 1.0E-46 T 11-10-2018 ABE28_017425 dc08a7b32535e27948b073b9ae54f8c2 212 Gene3D G3DSA:3.40.50.150 1 211 3.0E-72 T 11-10-2018 ABE28_017425 dc08a7b32535e27948b073b9ae54f8c2 212 SUPERFAMILY SSF53335 11 209 1.11E-29 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_017425 dc08a7b32535e27948b073b9ae54f8c2 212 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 208 4.7E-58 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 ABE28_021100 a6b4b9ba2efc97a4e623cf96554873f0 260 Gene3D G3DSA:1.10.10.10 1 102 7.2E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_021100 a6b4b9ba2efc97a4e623cf96554873f0 260 SUPERFAMILY SSF46785 2 98 5.12E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021100 a6b4b9ba2efc97a4e623cf96554873f0 260 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 8 75 3.1E-20 T 11-10-2018 IPR002831 Transcription regulator TrmB, N-terminal ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Pfam PF03462 PCRF domain 1 179 3.0E-59 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Pfam PF00472 RF-1 domain 189 298 3.2E-42 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Gene3D G3DSA:1.20.58.410 1 76 4.1E-16 T 11-10-2018 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 SMART SM00937 45 155 2.5E-57 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 325 1.1E-166 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 SUPERFAMILY SSF75620 1 323 9.29E-134 T 11-10-2018 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.181 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Gene3D G3DSA:3.30.160.20 186 281 1.7E-96 T 11-10-2018 ABE28_022380 f82ec6b1441554aefb661a494a446427 326 Gene3D G3DSA:3.30.70.1660 90 319 1.7E-96 T 11-10-2018 ABE28_002370 d612ff4c321ec19586976adbee460a23 382 Gene3D G3DSA:3.40.1710.10 43 126 7.5E-7 T 11-10-2018 ABE28_002370 d612ff4c321ec19586976adbee460a23 382 Pfam PF12698 ABC-2 family transporter protein 22 375 1.5E-34 T 11-10-2018 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 130 146 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 24 37 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 196 210 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 98 118 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 61 73 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 PRINTS PR00996 Glutamate methyltransferase family signature 215 238 1.7E-38 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 Gene3D G3DSA:3.40.50.150 67 257 4.7E-65 T 11-10-2018 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 Pfam PF01739 CheR methyltransferase, SAM binding domain 68 247 1.9E-59 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 SUPERFAMILY SSF53335 68 253 1.22E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 SMART SM00138 2 255 5.1E-102 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 Pfam PF03705 CheR methyltransferase, all-alpha domain 3 54 2.3E-13 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal ABE28_014260 e5c8ad306f6141fdd5411b8753ca2d21 257 SUPERFAMILY SSF47757 3 67 9.15E-12 T 11-10-2018 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 Pfam PF12833 Helix-turn-helix domain 206 284 6.9E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 Gene3D G3DSA:2.60.120.10 13 100 1.3E-15 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 SUPERFAMILY SSF51215 31 166 6.02E-22 T 11-10-2018 IPR037923 Transcription regulator HTH-like ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 SUPERFAMILY SSF46689 237 285 6.09E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 Gene3D G3DSA:1.10.10.60 183 234 2.4E-13 T 11-10-2018 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 SMART SM00342 200 283 1.5E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 Gene3D G3DSA:1.10.10.60 235 286 6.9E-16 T 11-10-2018 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 Pfam PF02311 AraC-like ligand binding domain 18 102 1.1E-15 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABE28_012480 110b1194a57b3d6ce1728797f1687b63 287 SUPERFAMILY SSF46689 184 233 4.84E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_008550 7be7c45b4f541fad5bdc9dc31d883c9b 417 Gene3D G3DSA:1.20.1250.20 211 404 2.3E-26 T 11-10-2018 ABE28_008550 7be7c45b4f541fad5bdc9dc31d883c9b 417 SUPERFAMILY SSF103473 7 403 6.54E-71 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_008550 7be7c45b4f541fad5bdc9dc31d883c9b 417 Pfam PF07690 Major Facilitator Superfamily 22 353 1.8E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_008550 7be7c45b4f541fad5bdc9dc31d883c9b 417 Gene3D G3DSA:1.20.1250.20 7 204 1.6E-37 T 11-10-2018 ABE28_010575 1d5c392bcfd157c9ae7ae9e042652282 331 SMART SM00797 24 315 1.9E-133 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABE28_010575 1d5c392bcfd157c9ae7ae9e042652282 331 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 5 317 4.8E-95 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABE28_010575 1d5c392bcfd157c9ae7ae9e042652282 331 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 296 2.6E-92 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B ABE28_010575 1d5c392bcfd157c9ae7ae9e042652282 331 SUPERFAMILY SSF50891 197 303 1.48E-7 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_010575 1d5c392bcfd157c9ae7ae9e042652282 331 Gene3D G3DSA:2.40.100.10 186 323 4.5E-48 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 SUPERFAMILY SSF52151 4 311 3.14E-78 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 PIRSF PIRSF000446 1 311 1.8E-117 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 290 1.5E-113 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 Pfam PF00698 Acyl transferase domain 6 284 3.0E-42 T 11-10-2018 IPR014043 Acyl transferase ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 Gene3D G3DSA:3.30.70.250 124 197 1.1E-96 T 11-10-2018 ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 SUPERFAMILY SSF55048 129 193 4.97E-15 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 Gene3D G3DSA:3.40.366.10 5 286 1.1E-96 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 ABE28_007785 c9a472e3cd15055fa82e9ac5056ad2f9 315 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 312 2.1E-48 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain ABE28_020760 3ad6286a0124af63bea28901053365c9 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 2.0E-74 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.611 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 Gene3D G3DSA:3.30.1360.80 1 157 2.2E-62 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 SUPERFAMILY SSF63411 4 149 3.02E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.6E-40 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 PIRSF PIRSF006160 1 157 2.5E-61 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_020760 3ad6286a0124af63bea28901053365c9 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 3.4E-51 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 ABE28_017155 675ab8492a43d02118102099b09c1545 430 SUPERFAMILY SSF142764 3 425 2.48E-96 T 11-10-2018 ABE28_017155 675ab8492a43d02118102099b09c1545 430 Gene3D G3DSA:3.40.980.20 236 428 1.7E-28 T 11-10-2018 ABE28_017155 675ab8492a43d02118102099b09c1545 430 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 418 8.9E-30 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain ABE28_017155 675ab8492a43d02118102099b09c1545 430 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 1.3E-61 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ABE28_017155 675ab8492a43d02118102099b09c1545 430 Gene3D G3DSA:3.40.50.10840 3 231 1.8E-73 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ABE28_021785 5e2a0818ab92a98633bfa9d2894ff63c 102 Pfam PF00085 Thioredoxin 12 85 3.0E-8 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_021785 5e2a0818ab92a98633bfa9d2894ff63c 102 SUPERFAMILY SSF52833 7 100 6.94E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_021785 5e2a0818ab92a98633bfa9d2894ff63c 102 Gene3D G3DSA:3.40.30.10 4 100 1.9E-11 T 11-10-2018 ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 SUPERFAMILY SSF49785 3 180 3.28E-53 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Gene3D G3DSA:2.60.120.260 10 179 1.8E-46 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Pfam PF00703 Glycosyl hydrolases family 2 183 291 1.1E-8 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 SUPERFAMILY SSF49303 189 291 2.85E-9 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 19 139 1.0E-21 T 11-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Gene3D G3DSA:3.20.20.80 293 597 5.4E-62 T 11-10-2018 ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 297 590 1.7E-15 T 11-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 SUPERFAMILY SSF51445 288 590 1.54E-62 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_020035 f3220d204557b98013538dfdbc8b36df 600 Gene3D G3DSA:2.60.40.10 182 291 2.0E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 6 345 1.4E-93 T 11-10-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 SUPERFAMILY SSF53383 3 349 1.63E-68 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 Gene3D G3DSA:3.40.640.10 37 259 7.4E-102 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 Gene3D G3DSA:3.90.1150.10 25 345 7.4E-102 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 211 224 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABE28_023250 312b43e074149c8548bc5c915d6e130e 357 Pfam PF00155 Aminotransferase class I and II 25 337 8.1E-35 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_020200 84bd990557d6455156ce464a733f01b0 323 SUPERFAMILY SSF51735 1 321 8.0E-98 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020200 84bd990557d6455156ce464a733f01b0 323 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 321 7.4E-134 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 ABE28_020200 84bd990557d6455156ce464a733f01b0 323 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 251 3.4E-58 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_020200 84bd990557d6455156ce464a733f01b0 323 Gene3D G3DSA:3.40.50.720 2 263 8.6E-125 T 11-10-2018 ABE28_020200 84bd990557d6455156ce464a733f01b0 323 Gene3D G3DSA:3.90.25.10 183 318 8.6E-125 T 11-10-2018 ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 16 98 5.5E-28 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 Gene3D G3DSA:3.40.50.720 112 265 2.3E-89 T 11-10-2018 ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 SUPERFAMILY SSF51735 111 291 5.25E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 SUPERFAMILY SSF53223 5 110 2.36E-33 T 11-10-2018 ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 Gene3D G3DSA:3.40.50.10860 15 281 2.3E-89 T 11-10-2018 ABE28_001845 f5c5731e8e0096c54386cb8913d8947d 294 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 11 293 32.04 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 ABE28_001350 cd1dff0616001766c1f3530d30179597 383 SMART SM00331 162 382 2.8E-25 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001350 cd1dff0616001766c1f3530d30179597 383 Gene3D G3DSA:3.60.40.10 130 380 8.4E-42 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001350 cd1dff0616001766c1f3530d30179597 383 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 189 379 1.5E-27 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001350 cd1dff0616001766c1f3530d30179597 383 SUPERFAMILY SSF81606 233 379 5.49E-5 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_019775 ae402e8fdbc2bcb1408f5f247bb5bc7f 162 Gene3D G3DSA:3.40.630.30 2 144 4.9E-10 T 11-10-2018 ABE28_019775 ae402e8fdbc2bcb1408f5f247bb5bc7f 162 SUPERFAMILY SSF55729 1 134 9.92E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_019775 ae402e8fdbc2bcb1408f5f247bb5bc7f 162 Pfam PF00583 Acetyltransferase (GNAT) family 38 134 5.6E-8 T 11-10-2018 IPR000182 GNAT domain ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 Gene3D G3DSA:1.10.287.950 113 428 2.5E-60 T 11-10-2018 ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 SMART SM00304 71 124 3.9E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 SMART SM00283 153 428 2.9E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 SUPERFAMILY SSF58104 100 427 2.09E-64 T 11-10-2018 ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 Pfam PF00672 HAMP domain 73 121 2.5E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_022900 25943a792467831a80c65f23daa1c8b6 429 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 229 381 7.6E-35 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_018225 f1cbd79eedbeadb8b0b95947a4131be4 386 Pfam PF12832 MFS_1 like family 6 357 6.2E-54 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain ABE28_018225 f1cbd79eedbeadb8b0b95947a4131be4 386 SUPERFAMILY SSF103473 4 376 2.22E-43 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018225 f1cbd79eedbeadb8b0b95947a4131be4 386 Gene3D G3DSA:1.20.1250.20 184 378 1.1E-37 T 11-10-2018 ABE28_018225 f1cbd79eedbeadb8b0b95947a4131be4 386 Gene3D G3DSA:1.20.1250.20 2 181 2.8E-26 T 11-10-2018 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 13 262 2.3E-77 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 SUPERFAMILY SSF69189 275 373 1.69E-14 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 Gene3D G3DSA:3.40.710.10 10 283 3.0E-87 T 11-10-2018 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 SMART SM00936 283 391 1.5E-13 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 391 1.4E-14 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 Gene3D G3DSA:2.60.410.10 285 391 1.2E-17 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 48 59 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 132 145 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 105 122 1.8E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_000025 81e2311cce4caa95265fd681847bd785 421 SUPERFAMILY SSF56601 18 282 5.79E-74 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 Hamap MF_01680 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase [mtnX]. 1 215 46.87 T 11-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 Pfam PF12710 haloacid dehalogenase-like hydrolase 5 176 8.9E-22 T 11-10-2018 ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 TIGRFAM TIGR03333 salvage_mtnX: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase 4 217 1.1E-96 T 11-10-2018 IPR017718 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase GO:0016791|GO:0071267 KEGG: 00270+3.1.3.87|MetaCyc: PWY-4361 ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 Gene3D G3DSA:3.90.1470.20 14 133 3.3E-68 T 11-10-2018 ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 Gene3D G3DSA:3.40.50.1000 5 208 3.3E-68 T 11-10-2018 IPR023214 HAD superfamily ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 SUPERFAMILY SSF56784 1 214 1.76E-52 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 178 3.2E-37 T 11-10-2018 ABE28_013140 aeabea1fc275bac2515c81246501cd81 219 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 2 185 1.8E-50 T 11-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Gene3D G3DSA:3.30.450.20 245 356 2.1E-10 T 11-10-2018 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SUPERFAMILY SSF55785 235 355 2.28E-9 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SMART SM00387 476 588 9.9E-40 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SUPERFAMILY SSF55874 420 584 4.71E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SMART SM00388 363 430 1.9E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Gene3D G3DSA:1.10.287.130 357 433 2.1E-27 T 11-10-2018 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Gene3D G3DSA:1.20.1480.50 148 244 6.5E-10 T 11-10-2018 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SMART SM00304 188 240 9.6E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SUPERFAMILY SSF158472 190 237 3.01E-7 T 11-10-2018 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 566 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 541 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 585 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 527 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Gene3D G3DSA:3.30.565.10 437 589 4.9E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Pfam PF00989 PAS fold 248 354 4.5E-6 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Pfam PF16736 Single Cache-like 33 149 1.3E-17 T 11-10-2018 IPR031967 PhoR, single Cache-like domain ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 SUPERFAMILY SSF47384 350 430 2.35E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 429 9.5E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 ABE28_016940 be8433f494017bd3b6cb41a7483fcf3e 592 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 585 6.0E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_002590 9ab17c169aba2f9a103c55cc7f574f5f 156 Gene3D G3DSA:3.40.50.960 2 154 3.0E-63 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002590 9ab17c169aba2f9a103c55cc7f574f5f 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 31.541 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002590 9ab17c169aba2f9a103c55cc7f574f5f 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 149 2.1E-59 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002590 9ab17c169aba2f9a103c55cc7f574f5f 156 SUPERFAMILY SSF52121 5 153 4.45E-62 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002590 9ab17c169aba2f9a103c55cc7f574f5f 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 150 1.2E-58 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_017760 090ccd15f5ac7d62d95d15d6c360bf28 379 Pfam PF14504 CAP-associated N-terminal 106 243 3.0E-35 T 11-10-2018 IPR029410 CAP-associated domain ABE28_017760 090ccd15f5ac7d62d95d15d6c360bf28 379 Pfam PF00188 Cysteine-rich secretory protein family 260 369 2.4E-12 T 11-10-2018 IPR014044 CAP domain ABE28_017760 090ccd15f5ac7d62d95d15d6c360bf28 379 Gene3D G3DSA:3.40.33.10 68 379 2.4E-70 T 11-10-2018 IPR035940 CAP superfamily ABE28_017760 090ccd15f5ac7d62d95d15d6c360bf28 379 SUPERFAMILY SSF55797 252 377 4.58E-21 T 11-10-2018 IPR035940 CAP superfamily ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.7E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 Pfam PF00106 short chain dehydrogenase 2 198 4.7E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 SUPERFAMILY SSF51735 2 244 1.0E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_012625 60ca29de4258744b57c3c208274be8d5 249 Gene3D G3DSA:3.40.50.720 1 247 1.4E-49 T 11-10-2018 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 Gene3D G3DSA:3.40.50.1390 1 133 1.1E-43 T 11-10-2018 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 Pfam PF13408 Recombinase zinc beta ribbon domain 282 336 7.4E-12 T 11-10-2018 IPR025827 Recombinase zinc beta ribbon domain ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 Gene3D G3DSA:1.10.10.2600 135 270 9.9E-24 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 Pfam PF00239 Resolvase, N terminal domain 4 151 4.7E-42 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 Pfam PF07508 Recombinase 172 269 8.0E-19 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 SUPERFAMILY SSF53041 1 151 1.44E-39 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 ABE28_003075 0ce12f6d11c584c33985cb71b91430c3 474 SMART SM00857 3 151 1.2E-57 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 Pfam PF02567 Phenazine biosynthesis-like protein 8 259 5.7E-58 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 225 3.7E-32 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 Gene3D G3DSA:3.10.310.10 119 251 2.3E-81 T 11-10-2018 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 PIRSF PIRSF016184 1 262 3.5E-49 T 11-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 Gene3D G3DSA:3.10.310.10 5 254 2.3E-81 T 11-10-2018 ABE28_010480 91be5f8e6f6820fe2a05d581ac0f8629 263 SUPERFAMILY SSF54506 1 261 5.58E-66 T 11-10-2018 ABE28_001630 fb168f1e8b200a1a3d8c9eae09b342f5 143 Gene3D G3DSA:3.10.180.10 9 142 2.6E-42 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_001630 fb168f1e8b200a1a3d8c9eae09b342f5 143 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 134 5.7E-9 T 11-10-2018 IPR028973 PhnB-like ABE28_001630 fb168f1e8b200a1a3d8c9eae09b342f5 143 SUPERFAMILY SSF54593 3 137 9.5E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_010510 7fdfc308c7acf047d869e15bf653b518 185 SUPERFAMILY SSF103473 8 177 8.37E-24 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010510 7fdfc308c7acf047d869e15bf653b518 185 Gene3D G3DSA:1.20.1250.20 2 181 5.5E-22 T 11-10-2018 ABE28_010510 7fdfc308c7acf047d869e15bf653b518 185 Pfam PF07690 Major Facilitator Superfamily 12 171 2.0E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_006485 0829066ec73b808503e4720cb30ec110 545 Pfam PF01740 STAS domain 431 529 3.0E-16 T 11-10-2018 IPR002645 STAS domain ABE28_006485 0829066ec73b808503e4720cb30ec110 545 SUPERFAMILY SSF52091 430 533 3.34E-18 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_006485 0829066ec73b808503e4720cb30ec110 545 Gene3D G3DSA:3.30.750.24 414 539 9.0E-26 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_006485 0829066ec73b808503e4720cb30ec110 545 ProSitePatterns PS01130 SLC26A transporters signature. 44 65 - T 11-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 ABE28_006485 0829066ec73b808503e4720cb30ec110 545 Pfam PF00916 Sulfate permease family 15 378 3.0E-97 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 ABE28_007970 91ad9b89c9bbecf819fd9fb370e65d6e 200 Gene3D G3DSA:1.25.60.10 129 200 6.2E-5 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily ABE28_007970 91ad9b89c9bbecf819fd9fb370e65d6e 200 Pfam PF03448 MgtE intracellular N domain 137 197 7.8E-7 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain ABE28_007970 91ad9b89c9bbecf819fd9fb370e65d6e 200 SUPERFAMILY SSF158791 135 191 2.22E-7 T 11-10-2018 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 Pfam PF01235 Sodium:alanine symporter family 54 448 5.4E-161 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 436 4.0E-155 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 90 105 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PIRSF PIRSF006060 51 260 9.8E-8 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PIRSF PIRSF006060 329 455 0.11 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PIRSF PIRSF006060 3 49 27.0 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 345 367 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 208 227 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 405 425 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 90 112 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 180 198 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_010615 7066ae50ad280489083e28bc61bea9ad 475 PRINTS PR00175 Sodium/alanine symporter signature 300 318 3.7E-62 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 ABE28_012765 ab37aaed28cc601cd9ccfcd57562aa22 602 Pfam PF05569 BlaR1 peptidase M56 8 309 2.2E-53 T 11-10-2018 IPR008756 Peptidase M56 ABE28_012765 ab37aaed28cc601cd9ccfcd57562aa22 602 Gene3D G3DSA:3.40.710.10 344 602 4.8E-90 T 11-10-2018 ABE28_012765 ab37aaed28cc601cd9ccfcd57562aa22 602 Pfam PF00905 Penicillin binding protein transpeptidase domain 388 588 1.9E-39 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_012765 ab37aaed28cc601cd9ccfcd57562aa22 602 SUPERFAMILY SSF56601 372 596 5.81E-38 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_008690 34c0135cd183513fe7caae8988715b8f 243 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 2 243 37.099 T 11-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 ABE28_008690 34c0135cd183513fe7caae8988715b8f 243 Pfam PF04794 YdjC-like protein 4 228 1.1E-54 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like ABE28_008690 34c0135cd183513fe7caae8988715b8f 243 SUPERFAMILY SSF88713 2 229 9.78E-65 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_008690 34c0135cd183513fe7caae8988715b8f 243 Gene3D G3DSA:3.20.20.370 2 232 3.5E-73 T 11-10-2018 ABE28_010195 7a5137a0e3c685ecdcddabcd6500a21f 97 SUPERFAMILY SSF54909 1 92 1.03E-25 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_010195 7a5137a0e3c685ecdcddabcd6500a21f 97 Gene3D G3DSA:3.30.70.100 1 94 2.1E-25 T 11-10-2018 ABE28_010195 7a5137a0e3c685ecdcddabcd6500a21f 97 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 7.7E-19 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_006425 a92a3b5c4d2460f71ea28cede9ec5bdf 373 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 338 1.5E-83 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABE28_006425 a92a3b5c4d2460f71ea28cede9ec5bdf 373 SUPERFAMILY SSF51395 5 340 2.82E-97 T 11-10-2018 ABE28_006425 a92a3b5c4d2460f71ea28cede9ec5bdf 373 Gene3D G3DSA:3.20.20.70 3 369 2.7E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_021280 5ba049221d20c91308fd1e67fa84d1bb 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 2 272 17.318 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABE28_021280 5ba049221d20c91308fd1e67fa84d1bb 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 7 265 1.1E-88 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABE28_021280 5ba049221d20c91308fd1e67fa84d1bb 273 Pfam PF02673 Bacitracin resistance protein BacA 7 267 3.7E-79 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABE28_024115 4fe6e1ba1dfb38b33d46bc5ffadcd73e 153 Pfam PF07366 SnoaL-like polyketide cyclase 21 146 2.7E-22 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABE28_024115 4fe6e1ba1dfb38b33d46bc5ffadcd73e 153 SUPERFAMILY SSF54427 13 146 2.94E-25 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_024115 4fe6e1ba1dfb38b33d46bc5ffadcd73e 153 Gene3D G3DSA:3.10.450.50 11 149 1.1E-23 T 11-10-2018 ABE28_021740 76af2f573fe409c58e36c3a3995cc94b 433 SUPERFAMILY SSF101960 16 432 1.7E-120 T 11-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily ABE28_021740 76af2f573fe409c58e36c3a3995cc94b 433 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 149 424 2.3E-78 T 11-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 ABE28_021740 76af2f573fe409c58e36c3a3995cc94b 433 Pfam PF01458 Uncharacterized protein family (UPF0051) 183 407 4.4E-65 T 11-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 ABE28_022325 0e8900cad006d901386a7fec31f0ff6b 177 Pfam PF04264 YceI-like domain 6 173 1.3E-46 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABE28_022325 0e8900cad006d901386a7fec31f0ff6b 177 SMART SM00867 5 174 1.4E-76 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like ABE28_022325 0e8900cad006d901386a7fec31f0ff6b 177 Gene3D G3DSA:2.40.128.110 5 177 1.2E-57 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABE28_022325 0e8900cad006d901386a7fec31f0ff6b 177 SUPERFAMILY SSF101874 5 175 5.75E-59 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 SUPERFAMILY SSF100950 11 218 3.86E-62 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 10 215 1.7E-86 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 Pfam PF01144 Coenzyme A transferase 13 205 2.9E-32 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 SMART SM00882 13 208 2.4E-62 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 51 59 - T 11-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 ABE28_008525 397f6de86f4dad8baca54178dc64f610 229 Gene3D G3DSA:3.40.1080.10 10 219 5.2E-83 T 11-10-2018 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 513 68.324 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 Pfam PF00171 Aldehyde dehydrogenase family 48 508 8.4E-158 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 Gene3D G3DSA:3.40.309.10 289 478 3.6E-189 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 312 323 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 284 291 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 4 513 1.3E-251 T 11-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 Gene3D G3DSA:3.40.605.10 8 507 3.6E-189 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_020995 5d29502e079df0981b87789e9d745b0c 513 SUPERFAMILY SSF53720 3 509 1.7E-156 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_010070 567944738716895465919a020c70a74f 135 Pfam PF00011 Hsp20/alpha crystallin family 40 134 5.6E-5 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain ABE28_010070 567944738716895465919a020c70a74f 135 SUPERFAMILY SSF49764 34 134 1.85E-12 T 11-10-2018 IPR008978 HSP20-like chaperone ABE28_010070 567944738716895465919a020c70a74f 135 Gene3D G3DSA:2.60.40.790 33 123 1.0E-12 T 11-10-2018 IPR008978 HSP20-like chaperone ABE28_023530 3978b65d7e6e8384a301e503a10ff8d2 306 SUPERFAMILY SSF53822 36 306 1.56E-90 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_023530 3978b65d7e6e8384a301e503a10ff8d2 306 Pfam PF13407 Periplasmic binding protein domain 41 291 2.9E-65 T 11-10-2018 IPR025997 Periplasmic binding protein ABE28_023530 3978b65d7e6e8384a301e503a10ff8d2 306 Gene3D G3DSA:3.40.50.2300 45 291 3.1E-94 T 11-10-2018 ABE28_023530 3978b65d7e6e8384a301e503a10ff8d2 306 Gene3D G3DSA:3.40.50.2300 139 272 3.1E-94 T 11-10-2018 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 6.0E-113 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 Gene3D G3DSA:3.20.20.70 1 285 7.0E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 1.2E-102 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 PIRSF PIRSF001359 1 285 7.0E-124 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 SUPERFAMILY SSF51569 1 285 2.78E-104 T 11-10-2018 ABE28_022970 256d519f1f4f54104253c482ab2a209b 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 2.3E-129 T 11-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 ABE28_002610 f005173efc85321862d1d700e81b8c13 295 SUPERFAMILY SSF53474 36 289 2.23E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_002610 f005173efc85321862d1d700e81b8c13 295 Gene3D G3DSA:3.40.50.1820 3 293 4.7E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_002610 f005173efc85321862d1d700e81b8c13 295 Pfam PF07859 alpha/beta hydrolase fold 62 267 1.1E-49 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABE28_013690 e5269506c2c63a4ee75487fb8b89dee3 429 PIRSF PIRSF006351 1 426 2.9E-152 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 ABE28_013690 e5269506c2c63a4ee75487fb8b89dee3 429 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 417 3.4E-125 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 ABE28_013690 e5269506c2c63a4ee75487fb8b89dee3 429 Pfam PF02378 Phosphotransferase system, EIIC 29 343 1.0E-55 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_007655 de6a06b3c0c606202b9624c835f21cde 573 Gene3D G3DSA:3.40.970.40 242 289 2.4E-16 T 11-10-2018 ABE28_007655 de6a06b3c0c606202b9624c835f21cde 573 Gene3D G3DSA:2.30.310.10 1 167 1.9E-67 T 11-10-2018 ABE28_007655 de6a06b3c0c606202b9624c835f21cde 573 Pfam PF05670 Domain of unknown function (DUF814) 456 538 4.7E-28 T 11-10-2018 IPR008532 Domain of unknown function DUF814 ABE28_007655 de6a06b3c0c606202b9624c835f21cde 573 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 443 9.7E-163 T 11-10-2018 ABE28_007655 de6a06b3c0c606202b9624c835f21cde 573 Gene3D G3DSA:1.10.8.50 168 236 1.2E-24 T 11-10-2018 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 89 169 8.1E-28 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 246 253 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 SUPERFAMILY SSF54719 169 283 2.49E-40 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 177 278 1.3E-34 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 SUPERFAMILY SSF46609 87 175 1.57E-31 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 PRINTS PR01703 Manganese superoxide dismutase signature 244 256 6.2E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 PRINTS PR01703 Manganese superoxide dismutase signature 114 127 6.2E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 PRINTS PR01703 Manganese superoxide dismutase signature 153 166 6.2E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 PRINTS PR01703 Manganese superoxide dismutase signature 206 214 6.2E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 PRINTS PR01703 Manganese superoxide dismutase signature 93 104 6.2E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 Gene3D G3DSA:2.40.500.20 171 290 4.5E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_014530 0b10017f41b127b52fc61195ef6c41ae 291 Gene3D G3DSA:1.10.287.990 107 170 5.9E-25 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 ABE28_015295 fe9ae9233a65dc3539e9ed08023a4fd3 194 Gene3D G3DSA:3.40.50.1000 52 186 5.6E-8 T 11-10-2018 IPR023214 HAD superfamily ABE28_015295 fe9ae9233a65dc3539e9ed08023a4fd3 194 SUPERFAMILY SSF56784 3 162 1.57E-15 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_015295 fe9ae9233a65dc3539e9ed08023a4fd3 194 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 7 180 9.4E-11 T 11-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 ABE28_015295 fe9ae9233a65dc3539e9ed08023a4fd3 194 PIRSF PIRSF021362 2 189 2.3E-62 T 11-10-2018 IPR009206 Nucleotidase, putative ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 Gene3D G3DSA:3.40.50.1580 1 234 4.5E-73 T 11-10-2018 ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 SUPERFAMILY SSF53167 2 232 1.06E-91 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 232 4.8E-108 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 233 47.584 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_013185 dcbf8a7bbd3be95cf63662b2212acd05 234 Pfam PF01048 Phosphorylase superfamily 16 225 5.3E-40 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABE28_021685 6b770b70b70cbda6b2c2cc6e706db369 316 Pfam PF01551 Peptidase family M23 192 290 1.0E-18 T 11-10-2018 IPR016047 Peptidase M23 ABE28_021685 6b770b70b70cbda6b2c2cc6e706db369 316 SUPERFAMILY SSF51261 108 303 9.94E-34 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_021685 6b770b70b70cbda6b2c2cc6e706db369 316 Gene3D G3DSA:2.70.70.10 114 315 8.1E-57 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_010585 50f329162086c13888aed9730d6e2f80 133 Pfam PF07485 Domain of Unknown Function (DUF1259) 10 124 7.8E-26 T 11-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO ABE28_005970 a04e93ac79e444fd1d27545e0b1bab0b 288 Gene3D G3DSA:3.40.50.10170 1 152 2.3E-47 T 11-10-2018 ABE28_005970 a04e93ac79e444fd1d27545e0b1bab0b 288 SUPERFAMILY SSF82549 1 283 1.83E-93 T 11-10-2018 ABE28_005970 a04e93ac79e444fd1d27545e0b1bab0b 288 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 3 280 4.2E-97 T 11-10-2018 IPR003797 DegV ABE28_005970 a04e93ac79e444fd1d27545e0b1bab0b 288 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 1.0E-87 T 11-10-2018 IPR003797 DegV ABE28_005970 a04e93ac79e444fd1d27545e0b1bab0b 288 Gene3D G3DSA:3.30.1180.10 156 284 4.8E-51 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 206 228 4.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 248 268 4.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 126 140 4.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 384 395 4.5E-30 T 11-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Gene3D G3DSA:3.40.50.720 222 385 1.8E-167 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 SUPERFAMILY SSF53223 18 209 1.73E-72 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 SMART SM00839 217 458 6.4E-96 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Gene3D G3DSA:1.10.285.10 18 394 1.8E-167 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 PIRSF PIRSF000185 30 460 3.7E-123 T 11-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Gene3D G3DSA:1.10.285.10 395 460 8.7E-10 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 215 458 5.8E-92 T 11-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Gene3D G3DSA:3.40.50.10860 67 202 1.8E-167 T 11-10-2018 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 69 197 5.6E-50 T 11-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 ABE28_023525 68f50240093f0bf2013e76d2ea6f26bf 460 SUPERFAMILY SSF51735 215 459 8.3E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_017875 59179d877c33a960067c38c52bc24ba9 171 Hamap MF_01256 Putative metal-dependent hydrolase . 1 171 36.588 T 11-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT ABE28_017875 59179d877c33a960067c38c52bc24ba9 171 Pfam PF12867 DinB superfamily 34 162 2.2E-19 T 11-10-2018 IPR024775 DinB-like domain ABE28_017875 59179d877c33a960067c38c52bc24ba9 171 Gene3D G3DSA:1.20.120.450 1 171 2.1E-46 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017875 59179d877c33a960067c38c52bc24ba9 171 SUPERFAMILY SSF109854 3 171 7.78E-47 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 6.9E-142 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 SUPERFAMILY SSF56042 169 339 1.5E-57 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 161 2.3E-16 T 11-10-2018 IPR016188 PurM-like, N-terminal domain ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 339 1.4E-36 T 11-10-2018 IPR010918 PurM-like, C-terminal domain ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 Gene3D G3DSA:3.90.650.10 168 341 3.0E-70 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 340 47.568 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 Gene3D G3DSA:3.30.1330.10 1 167 1.0E-69 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_001925 81bc44f26b52c9db1cb9d7c2e2cae5da 341 SUPERFAMILY SSF55326 3 167 8.97E-52 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 Pfam PF02219 Methylenetetrahydrofolate reductase 316 585 4.4E-28 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 Gene3D G3DSA:3.20.20.330 1 293 4.0E-83 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 Gene3D G3DSA:3.20.20.220 311 601 5.8E-50 T 11-10-2018 ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 Pfam PF02574 Homocysteine S-methyltransferase 12 281 9.6E-54 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 SUPERFAMILY SSF82282 1 359 7.32E-93 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 ABE28_012995 4a30dc613ce6165244615e2e4e44c6ea 615 SUPERFAMILY SSF51730 316 601 1.92E-65 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 SUPERFAMILY SSF51905 1 200 1.52E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 5.2E-11 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 5.2E-11 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.2E-11 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 Gene3D G3DSA:3.50.50.100 1 382 2.6E-82 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 SUPERFAMILY SSF51905 150 330 4.43E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 1.5E-7 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 180 1.5E-7 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 289 296 1.5E-7 T 11-10-2018 ABE28_018155 30d6864fdd41bcbabc06fd6d5be5b912 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 317 2.9E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 SUPERFAMILY SSF52949 14 173 7.06E-35 T 11-10-2018 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 PRINTS PR00481 Cytosol aminopeptidase signature 341 361 3.9E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 PRINTS PR00481 Cytosol aminopeptidase signature 369 384 3.9E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 PRINTS PR00481 Cytosol aminopeptidase signature 282 303 3.9E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 PRINTS PR00481 Cytosol aminopeptidase signature 260 277 3.9E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 PRINTS PR00481 Cytosol aminopeptidase signature 319 340 3.9E-52 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 345 352 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 146 1.4E-26 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 184 489 1.8E-115 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 SUPERFAMILY SSF53187 180 492 8.58E-110 T 11-10-2018 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 Gene3D G3DSA:3.40.220.10 8 157 8.6E-37 T 11-10-2018 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 Gene3D G3DSA:3.40.630.10 170 495 1.4E-124 T 11-10-2018 ABE28_021535 5f882976fddb2e59fa596948115b8759 499 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 498 34.479 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 ABE28_021890 70abe9387063650b5a747929b8f9b4e6 366 Pfam PF03845 Spore germination protein 11 328 2.7E-83 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_021890 70abe9387063650b5a747929b8f9b4e6 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 16 360 1.9E-53 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_001775 820f4e69e7b9b05d7578155c308d76d3 315 Gene3D G3DSA:3.40.50.1980 180 311 6.0E-38 T 11-10-2018 ABE28_001775 820f4e69e7b9b05d7578155c308d76d3 315 SUPERFAMILY SSF53807 42 311 3.92E-65 T 11-10-2018 ABE28_001775 820f4e69e7b9b05d7578155c308d76d3 315 Gene3D G3DSA:3.40.50.1980 46 179 7.8E-38 T 11-10-2018 ABE28_001775 820f4e69e7b9b05d7578155c308d76d3 315 Pfam PF01497 Periplasmic binding protein 63 289 3.3E-38 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 396 455 8.1E-8 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 254 327 1.4E-26 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Gene3D G3DSA:3.40.1010.10 1 117 7.9E-8 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 205 8.1E-19 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 PIRSF PIRSF002845 1 489 2.1E-213 T 11-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Gene3D G3DSA:1.10.287.1080 228 351 9.0E-42 T 11-10-2018 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 TIGRFAM TIGR00444 mazG: MazG family protein 238 486 3.2E-98 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 SUPERFAMILY SSF101386 230 332 2.13E-23 T 11-10-2018 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 SUPERFAMILY SSF53790 4 256 2.76E-28 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 Gene3D G3DSA:1.10.287.1080 358 489 2.1E-42 T 11-10-2018 ABE28_000290 da30c630cea6678456bb4fc6cbe4186c 490 SUPERFAMILY SSF101386 366 461 4.67E-22 T 11-10-2018 ABE28_013585 0410be089048e49215e42309f1a44b22 331 SMART SM01133 22 284 6.6E-26 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_013585 0410be089048e49215e42309f1a44b22 331 TIGRFAM TIGR01232 lacD: tagatose 1,6-diphosphate aldolase 4 326 9.9E-140 T 11-10-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 ABE28_013585 0410be089048e49215e42309f1a44b22 331 Pfam PF01791 DeoC/LacD family aldolase 24 283 7.9E-61 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_013585 0410be089048e49215e42309f1a44b22 331 Gene3D G3DSA:3.20.20.70 2 327 2.5E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_013585 0410be089048e49215e42309f1a44b22 331 SUPERFAMILY SSF51569 8 323 1.28E-63 T 11-10-2018 ABE28_013585 0410be089048e49215e42309f1a44b22 331 Hamap MF_00734 Tagatose 1,6-diphosphate aldolase [lacD]. 1 331 188.233 T 11-10-2018 IPR005927 Tagatose 1,6-diphosphate aldolase GO:0009024|GO:0019512 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 ABE28_005910 bcb7bb4e4cb0da2d59ea125340e197da 402 Pfam PF04235 Protein of unknown function (DUF418) 233 387 7.2E-45 T 11-10-2018 IPR007349 Domain of unknown function DUF418 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 3.3E-22 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 SUPERFAMILY SSF53850 88 294 2.95E-40 T 11-10-2018 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 Gene3D G3DSA:3.40.190.290 90 297 5.3E-51 T 11-10-2018 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 Pfam PF03466 LysR substrate binding domain 89 291 5.6E-44 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 Gene3D G3DSA:1.10.10.10 1 84 7.8E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020580 e0a3e50b1564b90e9a99c3a3bc872e15 300 SUPERFAMILY SSF46785 1 84 1.56E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017770 e7a9f810f5bfcb688f20bd4b4192878f 249 Pfam PF12146 Serine aminopeptidase, S33 16 225 2.9E-15 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ABE28_017770 e7a9f810f5bfcb688f20bd4b4192878f 249 Gene3D G3DSA:3.40.50.1820 1 246 5.2E-54 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_017770 e7a9f810f5bfcb688f20bd4b4192878f 249 PIRSF PIRSF017388 1 246 7.3E-80 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 ABE28_017770 e7a9f810f5bfcb688f20bd4b4192878f 249 SUPERFAMILY SSF53474 13 245 4.05E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004605 cd7ad5e8171fe079bd6f25832949b11f 389 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 10 380 3.0E-179 T 11-10-2018 IPR014230 Sporulation protein YhbH ABE28_004605 cd7ad5e8171fe079bd6f25832949b11f 389 Pfam PF04285 Protein of unknown function (DUF444) 194 383 4.4E-65 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 ABE28_004605 cd7ad5e8171fe079bd6f25832949b11f 389 Pfam PF04285 Protein of unknown function (DUF444) 12 184 1.4E-34 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 ABE28_012475 b3b2ea88517aee541529199792cd2fb7 501 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 112 499 2.5E-160 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ABE28_012475 b3b2ea88517aee541529199792cd2fb7 501 Pfam PF08666 SAF domain 12 86 3.0E-5 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_012475 b3b2ea88517aee541529199792cd2fb7 501 SMART SM00858 11 87 9.9E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_012475 b3b2ea88517aee541529199792cd2fb7 501 Gene3D G3DSA:3.90.1210.30 3 90 1.1E-22 T 11-10-2018 ABE28_014105 c91f8e7526badcd446eca7545860b896 225 SUPERFAMILY SSF48008 79 209 1.12E-15 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_014105 c91f8e7526badcd446eca7545860b896 225 Pfam PF07729 FCD domain 84 192 8.3E-18 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_014105 c91f8e7526badcd446eca7545860b896 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 72 4.0E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_014105 c91f8e7526badcd446eca7545860b896 225 SMART SM00345 14 72 6.7E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_014105 c91f8e7526badcd446eca7545860b896 225 SMART SM00895 82 208 4.1E-4 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_014105 c91f8e7526badcd446eca7545860b896 225 Gene3D G3DSA:1.10.10.10 1 73 7.5E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014105 c91f8e7526badcd446eca7545860b896 225 SUPERFAMILY SSF46785 1 76 9.89E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014105 c91f8e7526badcd446eca7545860b896 225 Gene3D G3DSA:1.20.120.530 76 217 1.1E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 Gene3D G3DSA:3.40.50.2020 74 274 1.9E-58 T 11-10-2018 ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 Pfam PF00156 Phosphoribosyl transferase domain 108 248 9.9E-23 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 72 2.0E-23 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 SUPERFAMILY SSF46785 2 72 1.5E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 Gene3D G3DSA:1.10.10.10 1 73 1.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 SUPERFAMILY SSF53271 93 254 1.56E-38 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 270 2.8E-117 T 11-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 ABE28_000210 78d583b0f04db19de09c456cf965b6c0 274 Pfam PF09182 Bacterial purine repressor, N-terminal 4 72 1.2E-31 T 11-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 Pfam PF01306 LacY proton/sugar symporter 2 386 3.7E-128 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 338 358 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 276 302 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 307 326 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 66 95 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 206 234 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 101 123 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 143 161 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 PRINTS PR00174 LacY proton/sugar symporter family signature 252 273 3.8E-79 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 SUPERFAMILY SSF103473 3 398 6.67E-45 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 Gene3D G3DSA:1.20.1250.20 1 195 1.0E-38 T 11-10-2018 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 Gene3D G3DSA:1.20.1250.20 196 393 5.0E-63 T 11-10-2018 ABE28_011630 c423a28f428fd3bb53d1bbc6558856c8 407 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 4 386 8.4E-128 T 11-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 Gene3D G3DSA:3.40.640.10 6 283 2.0E-96 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 SUPERFAMILY SSF55904 341 484 1.11E-39 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 Gene3D G3DSA:3.90.1150.10 313 415 5.1E-8 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 SUPERFAMILY SSF53383 6 386 7.07E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_007180 eb2644afe006f4fae0abcec145904750 485 Gene3D G3DSA:3.90.105.10 420 477 4.6E-19 T 11-10-2018 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 370 3.8E-113 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ABE28_007180 eb2644afe006f4fae0abcec145904750 485 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 378 460 3.4E-11 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 SUPERFAMILY SSF47648 2 66 1.44E-14 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 SUPERFAMILY SSF52418 74 335 5.23E-87 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 36.692 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 331 5.1E-116 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 Pfam PF02885 Glycosyl transferase family, helical bundle domain 2 63 6.7E-15 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 Gene3D G3DSA:1.20.970.10 3 67 5.5E-17 T 11-10-2018 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 Pfam PF00591 Glycosyl transferase family, a/b domain 73 323 1.9E-88 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_007205 888648f73dde2c36eb270fe87a8a4d16 340 Gene3D G3DSA:3.40.1030.10 70 338 3.3E-100 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 Gene3D G3DSA:3.40.50.300 2 289 1.4E-78 T 11-10-2018 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 Pfam PF12857 TOBE-like domain 285 342 2.5E-18 T 11-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 SUPERFAMILY SSF50331 239 346 1.28E-7 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 SUPERFAMILY SSF52540 3 246 2.15E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 241 7.5E-118 T 11-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 Pfam PF00005 ABC transporter 18 164 1.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006525 4f1756116ba727ee437f0ac09005aee0 354 SMART SM00382 27 214 2.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 SUPERFAMILY SSF55315 2 95 6.83E-24 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 Gene3D G3DSA:3.40.1280.10 97 250 2.7E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 SMART SM00967 31 99 3.7E-11 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 SUPERFAMILY SSF75217 102 249 4.71E-40 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 Gene3D G3DSA:3.30.1330.30 3 96 3.2E-25 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 95 1.2E-10 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 ABE28_016760 d187c4a527c015c32ca0af58b3cfce04 250 Pfam PF00588 SpoU rRNA Methylase family 109 246 7.0E-37 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 SUPERFAMILY SSF52440 1 113 7.19E-51 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 7.0E-239 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 SUPERFAMILY SSF51246 332 443 2.09E-46 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 1.2E-81 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 6.0E-44 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.0E-48 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Gene3D G3DSA:3.30.1490.20 131 202 1.0E-157 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 SUPERFAMILY SSF56059 83 349 1.57E-68 T 11-10-2018 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Gene3D G3DSA:3.40.50.20 2 85 7.6E-39 T 11-10-2018 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 SMART SM00878 337 443 5.6E-70 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_014960 438b19ae548274ce4aab4017e6876ee0 450 Gene3D G3DSA:3.30.470.20 87 443 1.0E-157 T 11-10-2018 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Gene3D G3DSA:3.90.1310.20 78 534 1.0E-211 T 11-10-2018 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 SUPERFAMILY SSF53955 72 280 1.86E-71 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Gene3D G3DSA:3.40.710.10 324 654 1.0E-211 T 11-10-2018 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Pfam PF00912 Transglycosylase 83 257 3.0E-61 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Pfam PF00905 Penicillin binding protein transpeptidase domain 352 639 3.0E-38 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Gene3D G3DSA:1.10.3810.10 93 285 1.0E-211 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 93 643 5.7E-172 T 11-10-2018 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 SUPERFAMILY SSF49265 702 785 1.78E-8 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 Gene3D G3DSA:2.60.40.10 680 791 4.5E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_014045 14166cb90018822ecc86c4bb6c5b26a6 911 SUPERFAMILY SSF56601 239 699 1.69E-105 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019700 d2bbafd81218c7fdf9a7d32375c0b825 165 Pfam PF04525 LURP-one-related 2 147 2.3E-13 T 11-10-2018 IPR007612 LURP-one-related ABE28_019700 d2bbafd81218c7fdf9a7d32375c0b825 165 Gene3D G3DSA:3.20.90.20 1 159 1.5E-6 T 11-10-2018 IPR038595 LURP-one-related superfamily ABE28_019700 d2bbafd81218c7fdf9a7d32375c0b825 165 SUPERFAMILY SSF54518 2 152 5.49E-31 T 11-10-2018 IPR025659 Tubby-like, C-terminal ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 Gene3D G3DSA:3.30.1320.10 1 90 4.8E-37 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 Pfam PF00886 Ribosomal protein S16 9 67 1.7E-25 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 SUPERFAMILY SSF54565 2 86 2.09E-34 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.42 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007830 b788808b7305c51c8de0b48cf001b604 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 3.3E-35 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_001530 5c7876a0a3b612274697357c222fce29 230 Gene3D G3DSA:3.30.420.40 95 189 2.0E-50 T 11-10-2018 ABE28_001530 5c7876a0a3b612274697357c222fce29 230 SUPERFAMILY SSF53067 108 214 2.33E-14 T 11-10-2018 ABE28_001530 5c7876a0a3b612274697357c222fce29 230 Gene3D G3DSA:3.30.420.40 3 216 2.0E-50 T 11-10-2018 ABE28_001530 5c7876a0a3b612274697357c222fce29 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 216 9.3E-52 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 ABE28_001530 5c7876a0a3b612274697357c222fce29 230 Pfam PF00814 Glycoprotease family 32 223 1.9E-33 T 11-10-2018 IPR000905 Gcp-like domain ABE28_001530 5c7876a0a3b612274697357c222fce29 230 SUPERFAMILY SSF53067 3 107 1.1E-27 T 11-10-2018 ABE28_004275 5bf1dc879a0af309a1a25c40b91172bb 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 1.6E-16 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 ABE28_004275 5bf1dc879a0af309a1a25c40b91172bb 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 391 8.3E-59 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 ABE28_004545 b9b4d9f86b949305e67235456eec5646 222 Gene3D G3DSA:3.50.40.10 69 214 2.6E-8 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 ABE28_004545 b9b4d9f86b949305e67235456eec5646 222 Pfam PF03483 B3/4 domain 64 182 1.7E-18 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABE28_004545 b9b4d9f86b949305e67235456eec5646 222 SMART SM00873 62 212 5.4E-10 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 ABE28_004545 b9b4d9f86b949305e67235456eec5646 222 SUPERFAMILY SSF56037 58 215 1.33E-29 T 11-10-2018 ABE28_016770 ec270c48a060284ce0967c7e9c6760d9 129 Pfam PF11181 Heat induced stress protein YflT 6 106 5.2E-10 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_020075 bdd3632b518aa26172c439e90d7633a4 444 Pfam PF05525 Branched-chain amino acid transport protein 10 432 5.5E-162 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABE28_020075 bdd3632b518aa26172c439e90d7633a4 444 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 1.1E-154 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 Gene3D G3DSA:3.30.1380.10 8 145 3.3E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 82 145 1.8E-15 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 SUPERFAMILY SSF47090 259 323 2.88E-12 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 Pfam PF01471 Putative peptidoglycan binding domain 273 321 4.0E-8 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 Gene3D G3DSA:1.10.101.10 258 325 5.6E-14 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_009075 d3836cf7aa42788fbd867118966ab5d1 325 SUPERFAMILY SSF55166 20 151 5.49E-25 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 Gene3D G3DSA:3.90.180.10 14 315 3.1E-99 T 11-10-2018 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 SMART SM00829 11 325 1.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 SUPERFAMILY SSF51735 134 295 2.13E-31 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 130 6.1E-35 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 Gene3D G3DSA:3.40.50.720 148 282 3.1E-99 T 11-10-2018 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 Pfam PF00107 Zinc-binding dehydrogenase 170 291 3.3E-14 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABE28_011120 b08b56da190b6a0605ee879b74e62a11 337 SUPERFAMILY SSF50129 1 169 3.35E-59 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Pfam PF12419 SNF2 Helicase protein 294 422 2.6E-35 T 11-10-2018 IPR022138 Helicase SWF/SNF-related ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Gene3D G3DSA:3.40.50.300 743 948 5.6E-88 T 11-10-2018 ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Pfam PF00271 Helicase conserved C-terminal domain 822 934 4.1E-21 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Gene3D G3DSA:1.20.120.850 757 983 5.6E-88 T 11-10-2018 ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Pfam PF00176 SNF2 family N-terminal domain 491 803 1.9E-59 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 Gene3D G3DSA:3.40.50.10810 447 732 4.2E-65 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 SUPERFAMILY SSF52540 737 987 1.35E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 SMART SM00487 473 702 1.2E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 SUPERFAMILY SSF52540 451 733 3.63E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022635 40be7b7fae70d5ab105f8b1107ba8587 990 SMART SM00490 851 934 1.8E-23 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_014760 dddd79c6fdbc42c2d844b63eb018cedd 331 Gene3D G3DSA:3.40.50.2300 151 323 1.2E-89 T 11-10-2018 ABE28_014760 dddd79c6fdbc42c2d844b63eb018cedd 331 SUPERFAMILY SSF53822 53 301 2.6E-14 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_014760 dddd79c6fdbc42c2d844b63eb018cedd 331 Gene3D G3DSA:3.40.50.2300 52 302 1.2E-89 T 11-10-2018 ABE28_014760 dddd79c6fdbc42c2d844b63eb018cedd 331 Pfam PF04392 ABC transporter substrate binding protein 42 330 3.0E-84 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 SUPERFAMILY SSF53850 8 273 4.11E-68 T 11-10-2018 ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 Gene3D G3DSA:3.40.190.10 142 238 7.4E-82 T 11-10-2018 ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 SMART SM00062 54 275 3.9E-77 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 SMART SM00079 54 275 1.9E-6 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 78 91 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 Gene3D G3DSA:3.40.190.10 55 272 7.4E-82 T 11-10-2018 ABE28_012230 fa26eb8e6f9a8eeb92a1bd9b992520c1 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 55 274 1.6E-58 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 SUPERFAMILY SSF51735 14 264 1.05E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 Gene3D G3DSA:3.40.50.720 5 266 7.5E-80 T 11-10-2018 ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 159 187 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 95 106 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 172 191 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 156 1.6E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 29 263 1.8E-57 T 11-10-2018 ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 95 106 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 193 210 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 142 158 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 191 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012685 b54fc10957927305b0d5f61db6b62acc 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 21 38 4.7E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 Hamap MF_00626 Germination protease [gpr]. 1 372 151.997 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 Pfam PF03418 Germination protease 17 371 2.5E-188 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 Gene3D G3DSA:3.40.50.1450 288 372 3.0E-17 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 Gene3D G3DSA:3.40.50.1450 1 279 5.3E-110 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 371 2.0E-141 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 PIRSF PIRSF019549 3 372 1.3E-180 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 SUPERFAMILY SSF53163 4 371 1.96E-127 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABE28_015545 9eba7716f520f502314c4d99f621cd4e 372 TIGRFAM TIGR01441 GPR: GPR endopeptidase 10 371 3.3E-178 T 11-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 ABE28_000110 210992615a802e93e8083174241159ec 484 SUPERFAMILY SSF55904 335 479 4.05E-19 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 ABE28_000110 210992615a802e93e8083174241159ec 484 Gene3D G3DSA:3.40.640.10 48 278 3.2E-111 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_000110 210992615a802e93e8083174241159ec 484 Gene3D G3DSA:3.90.1150.150 281 373 3.2E-111 T 11-10-2018 ABE28_000110 210992615a802e93e8083174241159ec 484 Gene3D G3DSA:3.90.100.10 396 481 6.3E-17 T 11-10-2018 ABE28_000110 210992615a802e93e8083174241159ec 484 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 413 473 1.1E-9 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 ABE28_000110 210992615a802e93e8083174241159ec 484 SUPERFAMILY SSF53383 6 356 1.99E-79 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_000110 210992615a802e93e8083174241159ec 484 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 304 1.6E-77 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 ABE28_001135 8e9c260c7b5419f609e79ef987b1fb67 335 Gene3D G3DSA:1.10.3470.10 5 334 2.6E-84 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_001135 8e9c260c7b5419f609e79ef987b1fb67 335 Pfam PF01032 FecCD transport family 18 327 5.4E-80 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_001135 8e9c260c7b5419f609e79ef987b1fb67 335 SUPERFAMILY SSF81345 7 327 6.02E-75 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_009975 881dcde130af5c89cf12db66c7aa5388 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 39 2.0E-5 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 ABE28_009975 881dcde130af5c89cf12db66c7aa5388 71 Hamap MF_00363 UPF0154 protein . 1 70 19.911 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 ABE28_009975 881dcde130af5c89cf12db66c7aa5388 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 9 67 2.2E-30 T 11-10-2018 IPR005359 Protein with unknown function UPF0154 ABE28_012335 3923b0146359bf1872a768087732dfd3 141 Pfam PF15428 Immunity protein 26 9 91 5.6E-6 T 11-10-2018 IPR029278 Immunity protein 26 ABE28_023140 d2098923b159126573980d65ac4cbb91 106 Pfam PF11181 Heat induced stress protein YflT 4 103 5.8E-29 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 5.1E-29 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 5.5E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 Gene3D G3DSA:3.40.50.300 4 333 7.4E-104 T 11-10-2018 ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 SMART SM00382 35 234 6.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 SUPERFAMILY SSF52540 6 255 6.88E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022685 c94e897ed6440f554bace6d44e03bb6c 335 Pfam PF00005 ABC transporter 27 184 2.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_015795 4b6be884c2afbcc11118867967e6adbe 139 SUPERFAMILY SSF46785 2 125 1.22E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015795 4b6be884c2afbcc11118867967e6adbe 139 Pfam PF02082 Transcriptional regulator 1 82 7.4E-29 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_015795 4b6be884c2afbcc11118867967e6adbe 139 Gene3D G3DSA:1.10.10.10 1 139 3.2E-53 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015795 4b6be884c2afbcc11118867967e6adbe 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_015795 4b6be884c2afbcc11118867967e6adbe 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 124 1.6E-35 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_008365 7ac6338354e70bdb96209486099a799b 347 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 8 346 9.2E-162 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 Gene3D G3DSA:3.40.50.720 158 292 2.4E-118 T 11-10-2018 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 SMART SM00829 17 345 1.5E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 SUPERFAMILY SSF51735 147 305 2.22E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008365 7ac6338354e70bdb96209486099a799b 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 139 8.6E-33 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 SUPERFAMILY SSF50129 5 178 8.52E-51 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_008365 7ac6338354e70bdb96209486099a799b 347 Gene3D G3DSA:3.90.180.10 22 336 2.4E-118 T 11-10-2018 ABE28_008365 7ac6338354e70bdb96209486099a799b 347 Pfam PF00107 Zinc-binding dehydrogenase 179 307 2.1E-30 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_005290 4a8519a7dcd57fb8dcacbbdf3a9b8ce2 214 SMART SM00530 13 68 4.8E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_005290 4a8519a7dcd57fb8dcacbbdf3a9b8ce2 214 Pfam PF06803 Protein of unknown function (DUF1232) 172 204 3.4E-11 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 ABE28_005290 4a8519a7dcd57fb8dcacbbdf3a9b8ce2 214 Gene3D G3DSA:1.10.260.40 1 71 1.3E-14 T 11-10-2018 ABE28_005290 4a8519a7dcd57fb8dcacbbdf3a9b8ce2 214 SUPERFAMILY SSF47413 7 73 2.62E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_005290 4a8519a7dcd57fb8dcacbbdf3a9b8ce2 214 Pfam PF01381 Helix-turn-helix 14 68 2.8E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 Gene3D G3DSA:1.10.1040.10 190 295 1.1E-22 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 Gene3D G3DSA:3.40.50.720 1 189 1.2E-55 T 11-10-2018 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 188 286 5.8E-19 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 SUPERFAMILY SSF48179 187 293 8.5E-20 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 PIRSF PIRSF000105 1 298 5.1E-86 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 182 5.2E-46 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_002795 df2e0ff9e5475d79fc8ef51e94f24a17 298 SUPERFAMILY SSF51735 1 185 7.9E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 SMART SM00866 94 230 1.4E-12 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 SUPERFAMILY SSF64288 61 236 1.08E-29 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 Gene3D G3DSA:3.40.1410.10 76 234 4.4E-24 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 SUPERFAMILY SSF46785 8 83 1.57E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 SMART SM00345 14 73 2.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.3E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 Pfam PF07702 UTRA domain 117 227 1.5E-20 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 Gene3D G3DSA:1.10.10.10 6 73 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_010895 817a44e846ef08a8654de1e6bbd4491d 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Pfam PF00013 KH domain 212 269 2.4E-6 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Pfam PF12072 Domain of unknown function (DUF3552) 5 204 5.1E-79 T 11-10-2018 IPR022711 Ribonuclease Y, N-terminal ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 2.2E-25 T 11-10-2018 IPR006675 HDIG domain ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 SUPERFAMILY SSF109604 315 466 6.73E-30 T 11-10-2018 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 SMART SM00471 331 437 3.4E-14 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 SUPERFAMILY SSF54791 207 303 1.66E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Gene3D G3DSA:1.10.3210.10 317 471 8.2E-19 T 11-10-2018 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Gene3D G3DSA:3.30.1370.10 207 309 5.4E-9 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Pfam PF01966 HD domain 336 427 1.0E-18 T 11-10-2018 IPR006674 HD domain ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 25.96 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 6.9E-247 T 11-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 ABE28_008335 2f5890db33b1e476f1627ad0583e8ff7 519 SMART SM00322 207 274 1.2E-6 T 11-10-2018 IPR004087 K Homology domain GO:0003676 ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 9.9E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 245 2.4E-74 T 11-10-2018 ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 SUPERFAMILY SSF51735 4 247 1.15E-95 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 3.1E-6 T 11-10-2018 ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 Gene3D G3DSA:3.40.50.720 2 247 2.7E-93 T 11-10-2018 ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 9.0E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_007790 704dd7295a7d279bc7576d4acbf6f2f5 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 246 9.3E-110 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABE28_012025 5325d796f848296b01cedd33a50f7b25 337 SUPERFAMILY SSF48208 12 324 1.36E-45 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ABE28_012025 5325d796f848296b01cedd33a50f7b25 337 Gene3D G3DSA:1.50.10.10 3 334 8.1E-32 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ABE28_012025 5325d796f848296b01cedd33a50f7b25 337 Pfam PF00723 Glycosyl hydrolases family 15 17 277 2.0E-17 T 11-10-2018 IPR011613 GH15-like domain Reactome: R-HSA-70221 ABE28_012225 539ae06dc33019c9c32bc3450c717904 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 11 103 2.6E-21 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_012225 539ae06dc33019c9c32bc3450c717904 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 209 1.6E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_012225 539ae06dc33019c9c32bc3450c717904 212 SUPERFAMILY SSF161098 13 194 1.07E-44 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012225 539ae06dc33019c9c32bc3450c717904 212 Gene3D G3DSA:1.10.3720.10 1 211 1.9E-53 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_014355 160db2348e4624c136789af83f882fa7 380 SUPERFAMILY SSF50249 7 109 3.28E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014355 160db2348e4624c136789af83f882fa7 380 Gene3D G3DSA:2.40.50.140 183 264 3.1E-28 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Gene3D G3DSA:2.40.50.140 267 351 1.7E-27 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 SUPERFAMILY SSF50249 186 273 7.86E-27 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014355 160db2348e4624c136789af83f882fa7 380 SUPERFAMILY SSF50249 254 361 9.29E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014355 160db2348e4624c136789af83f882fa7 380 SUPERFAMILY SSF50249 85 172 1.48E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014355 160db2348e4624c136789af83f882fa7 380 Gene3D G3DSA:2.40.50.140 95 180 5.3E-12 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Gene3D G3DSA:2.40.50.140 3 94 4.2E-16 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Pfam PF00575 S1 RNA binding domain 270 342 2.8E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Pfam PF00575 S1 RNA binding domain 98 167 8.6E-16 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Pfam PF00575 S1 RNA binding domain 14 83 2.2E-11 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_014355 160db2348e4624c136789af83f882fa7 380 Pfam PF00575 S1 RNA binding domain 186 256 7.6E-25 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 325 343 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 151 171 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 16 34 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 286 305 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 81 100 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 105 121 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 208 229 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 PRINTS PR00681 Ribosomal protein S1 signature 122 139 2.9E-48 T 11-10-2018 ABE28_014355 160db2348e4624c136789af83f882fa7 380 SMART SM00316 100 167 5.6E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_014355 160db2348e4624c136789af83f882fa7 380 SMART SM00316 186 256 7.2E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_014355 160db2348e4624c136789af83f882fa7 380 SMART SM00316 271 342 2.8E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_014355 160db2348e4624c136789af83f882fa7 380 SMART SM00316 14 84 1.6E-14 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 Gene3D G3DSA:3.40.1080.20 339 479 6.0E-41 T 11-10-2018 IPR038460 Acetyl-CoA hydrolase/transferase, C-terminal domain superfamily ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 Gene3D G3DSA:3.30.750.70 234 327 6.5E-6 T 11-10-2018 ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 SUPERFAMILY SSF100950 7 225 5.76E-67 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 Pfam PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain 322 466 2.1E-43 T 11-10-2018 IPR026888 Acetyl-CoA hydrolase/transferase C-terminal domain ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 Gene3D G3DSA:3.40.1080.10 6 177 1.5E-13 T 11-10-2018 ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 TIGRFAM TIGR03458 YgfH_subfam: succinate CoA transferase 16 499 1.6E-228 T 11-10-2018 IPR017821 Succinate CoA transferase GO:0006084|GO:0016740 ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 Pfam PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain 10 218 2.3E-28 T 11-10-2018 IPR003702 Acetyl-CoA hydrolase/transferase GO:0003824|GO:0006084 ABE28_002435 949e89201e1775e4dff6805ee2a772c9 508 SUPERFAMILY SSF100950 228 499 8.37E-84 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_011380 325960c9dce5505df4a0417ddca2c5e1 185 Pfam PF02669 K+-transporting ATPase, c chain 3 183 5.9E-71 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABE28_011380 325960c9dce5505df4a0417ddca2c5e1 185 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 184 31.521 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABE28_011380 325960c9dce5505df4a0417ddca2c5e1 185 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 184 2.3E-53 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABE28_011380 325960c9dce5505df4a0417ddca2c5e1 185 PIRSF PIRSF001296 1 185 7.1E-73 T 11-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 SMART SM00382 158 388 0.0027 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 SUPERFAMILY SSF52540 157 582 1.29E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 Pfam PF13087 AAA domain 399 585 3.0E-26 T 11-10-2018 ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 Gene3D G3DSA:3.40.50.300 105 391 1.6E-42 T 11-10-2018 ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 Gene3D G3DSA:3.40.50.300 409 621 1.2E-33 T 11-10-2018 ABE28_012140 b4298a48e1f90b554e5f56213b06f375 748 Pfam PF13086 AAA domain 147 366 4.0E-26 T 11-10-2018 ABE28_008555 516303b2cfe8591c1a30c75f84ea3faf 312 SMART SM00849 16 228 8.4E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008555 516303b2cfe8591c1a30c75f84ea3faf 312 Gene3D G3DSA:3.60.15.10 1 251 6.1E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008555 516303b2cfe8591c1a30c75f84ea3faf 312 Pfam PF00753 Metallo-beta-lactamase superfamily 16 228 1.5E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008555 516303b2cfe8591c1a30c75f84ea3faf 312 SUPERFAMILY SSF56281 3 301 6.81E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_001045 bc1a94f5d74b555bb0c6868abb117370 677 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 6 513 1.4E-100 T 11-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 ABE28_001045 bc1a94f5d74b555bb0c6868abb117370 677 Pfam PF00999 Sodium/hydrogen exchanger family 6 412 3.2E-59 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABE28_022015 8416fb57fae1a47c2559b337e7287120 308 Gene3D G3DSA:1.20.1530.20 153 306 5.1E-6 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ABE28_022015 8416fb57fae1a47c2559b337e7287120 308 Pfam PF03547 Membrane transport protein 155 300 4.1E-17 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 Gene3D G3DSA:1.10.20.140 94 166 6.4E-99 T 11-10-2018 ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 Pfam PF01715 IPP transferase 20 264 4.6E-87 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 SUPERFAMILY SSF52540 20 140 1.12E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 Gene3D G3DSA:3.40.50.300 2 268 6.4E-99 T 11-10-2018 ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 1 288 25.524 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABE28_008720 02bf372ed87444636d09f5e10ff4f1c9 306 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 1 272 1.8E-106 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 Pfam PF13476 AAA domain 4 233 1.3E-16 T 11-10-2018 IPR038729 Rad50/SbcC-type AAA domain ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 Gene3D G3DSA:3.40.50.300 272 563 3.6E-53 T 11-10-2018 ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 Gene3D G3DSA:3.40.50.300 1 271 1.4E-51 T 11-10-2018 ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 562 4.4E-188 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 PIRSF PIRSF003128 1 567 4.1E-184 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 SUPERFAMILY SSF52540 3 517 2.72E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014910 f8f2bbe03ba45ce908c2162e93a24eeb 571 SUPERFAMILY SSF52540 2 220 3.84E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 2 417 2.3E-88 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 Pfam PF07690 Major Facilitator Superfamily 4 395 5.7E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 Gene3D G3DSA:1.20.1720.10 1 208 3.6E-36 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 Gene3D G3DSA:1.20.1250.20 247 453 1.3E-18 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 SUPERFAMILY SSF103473 2 450 8.76E-54 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 124 148 1.3E-12 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 94 114 1.3E-12 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 288 312 1.3E-12 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 3 27 1.3E-12 T 11-10-2018 ABE28_019285 aa38fdb0bc08b0822c9ded3aca92dcc9 453 PRINTS PR01036 Tetracycline resistance protein TetB signature 386 405 1.3E-12 T 11-10-2018 ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 PIRSF PIRSF004749 2 179 8.1E-46 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 8 176 1.9E-46 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 PRINTS PR01576 Peptide deformylase signature 47 76 1.4E-30 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 PRINTS PR01576 Peptide deformylase signature 108 119 1.4E-30 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 PRINTS PR01576 Peptide deformylase signature 121 139 1.4E-30 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 PRINTS PR01576 Peptide deformylase signature 140 169 1.4E-30 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 26.03 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 Gene3D G3DSA:3.90.45.10 1 184 5.3E-63 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 SUPERFAMILY SSF56420 2 179 1.96E-56 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_007135 448c574027a1b033c0864f25ae7b9ab5 184 Pfam PF01327 Polypeptide deformylase 5 171 7.3E-45 T 11-10-2018 IPR023635 Peptide deformylase ABE28_015690 f98bd2fa718d9cfad289ea77c1e53322 229 Pfam PF07423 Protein of unknown function (DUF1510) 10 222 2.2E-62 T 11-10-2018 IPR009988 Protein of unknown function DUF1510 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 1.8E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 Gene3D G3DSA:1.10.10.10 148 238 6.4E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016945 049179ba9267600bc28105faa214dfb2 239 SMART SM00448 3 114 7.9E-49 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 SMART SM00862 157 233 3.6E-30 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 Gene3D G3DSA:3.40.50.12740 1 147 7.4E-49 T 11-10-2018 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 SUPERFAMILY SSF46894 132 234 1.98E-33 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 Pfam PF00072 Response regulator receiver domain 5 115 2.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_016945 049179ba9267600bc28105faa214dfb2 239 SUPERFAMILY SSF52172 2 126 5.55E-46 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_013670 49bcc111b369bc0a8df23c1d56bd1ace 361 SUPERFAMILY SSF50891 245 358 7.21E-40 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_013670 49bcc111b369bc0a8df23c1d56bd1ace 361 Gene3D G3DSA:2.40.100.10 243 359 1.6E-41 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_013670 49bcc111b369bc0a8df23c1d56bd1ace 361 SUPERFAMILY SSF51445 1 241 8.74E-93 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_013670 49bcc111b369bc0a8df23c1d56bd1ace 361 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 358 8.0E-144 T 11-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic ABE28_013670 49bcc111b369bc0a8df23c1d56bd1ace 361 Gene3D G3DSA:3.20.20.70 2 241 3.6E-90 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007855 608ccb646e6660829302f52038654730 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 2.2E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 Pfam PF01245 Ribosomal protein L19 3 112 2.9E-53 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_007855 608ccb646e6660829302f52038654730 115 PIRSF PIRSF002191 1 115 3.2E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 SUPERFAMILY SSF50104 1 114 2.11E-48 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABE28_007855 608ccb646e6660829302f52038654730 115 Gene3D G3DSA:2.30.30.790 4 115 9.0E-15 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007855 608ccb646e6660829302f52038654730 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 32.469 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_008245 a572a7f3451799937bffc841f9f8c0db 248 Gene3D G3DSA:3.90.226.10 36 221 8.3E-31 T 11-10-2018 ABE28_008245 a572a7f3451799937bffc841f9f8c0db 248 Pfam PF00574 Clp protease 43 219 3.3E-32 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_008245 a572a7f3451799937bffc841f9f8c0db 248 SUPERFAMILY SSF52096 28 228 3.17E-38 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_006970 efe81ddaef6050647ab0f0d7b582c2f5 209 SMART SM00382 22 205 7.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006970 efe81ddaef6050647ab0f0d7b582c2f5 209 Pfam PF00005 ABC transporter 17 156 3.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006970 efe81ddaef6050647ab0f0d7b582c2f5 209 SUPERFAMILY SSF52540 1 202 2.01E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006970 efe81ddaef6050647ab0f0d7b582c2f5 209 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006970 efe81ddaef6050647ab0f0d7b582c2f5 209 Gene3D G3DSA:3.40.50.300 4 209 1.4E-54 T 11-10-2018 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 SUPERFAMILY SSF51658 2 293 2.62E-98 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 3.4E-99 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 41.984 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 SMART SM00518 3 285 2.7E-124 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 Pfam PF01261 Xylose isomerase-like TIM barrel 22 237 1.5E-36 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 Gene3D G3DSA:3.20.20.150 1 297 1.0E-101 T 11-10-2018 ABE28_015320 63cea70c35134409c8c9708bd65dc04b 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 ABE28_022515 f420fbb0d66d55a01e2aab3d3eed4ed4 367 Gene3D G3DSA:3.40.50.2000 50 358 8.6E-68 T 11-10-2018 ABE28_022515 f420fbb0d66d55a01e2aab3d3eed4ed4 367 Pfam PF00534 Glycosyl transferases group 1 177 330 6.8E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_022515 f420fbb0d66d55a01e2aab3d3eed4ed4 367 Pfam PF13439 Glycosyltransferase Family 4 54 170 2.9E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_022515 f420fbb0d66d55a01e2aab3d3eed4ed4 367 SUPERFAMILY SSF53756 9 364 1.59E-74 T 11-10-2018 ABE28_022515 f420fbb0d66d55a01e2aab3d3eed4ed4 367 Gene3D G3DSA:3.40.50.2000 167 349 8.6E-68 T 11-10-2018 ABE28_021135 7d6fa5334721a249cedd6d5efc6b1f11 135 SUPERFAMILY SSF54593 11 135 2.15E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_021135 7d6fa5334721a249cedd6d5efc6b1f11 135 Gene3D G3DSA:3.10.180.10 6 135 1.8E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_021135 7d6fa5334721a249cedd6d5efc6b1f11 135 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 14 110 4.8E-12 T 11-10-2018 ABE28_016655 9d88376f190511a9de286fc0ee835f95 154 Pfam PF03061 Thioesterase superfamily 33 118 2.3E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_016655 9d88376f190511a9de286fc0ee835f95 154 SUPERFAMILY SSF54637 13 145 4.27E-36 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_016655 9d88376f190511a9de286fc0ee835f95 154 Gene3D G3DSA:3.10.129.10 6 148 3.8E-37 T 11-10-2018 ABE28_012245 bf4e7def0e4ee97b57dcfa7a5c27ccd7 300 Pfam PF03547 Membrane transport protein 158 295 3.4E-15 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABE28_012245 bf4e7def0e4ee97b57dcfa7a5c27ccd7 300 Pfam PF03547 Membrane transport protein 7 137 1.4E-6 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABE28_012245 bf4e7def0e4ee97b57dcfa7a5c27ccd7 300 Gene3D G3DSA:1.20.1530.20 150 300 2.4E-6 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 298 321 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 Gene3D G3DSA:1.10.3860.10 1 417 2.0E-133 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 357 377 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 1.1E-48 T 11-10-2018 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 38 53 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 SUPERFAMILY SSF118215 8 404 4.97E-125 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_001330 ec04d2b493196d26953258d9b51d3134 419 Pfam PF00375 Sodium:dicarboxylate symporter family 9 403 5.3E-121 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABE28_009365 ffd157bcfec03621e2724eb14ae96261 137 SUPERFAMILY SSF143100 3 69 1.7E-17 T 11-10-2018 IPR035069 TTHA1013/TTHA0281-like ABE28_009365 ffd157bcfec03621e2724eb14ae96261 137 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 7 105 4.6E-12 T 11-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system ABE28_009365 ffd157bcfec03621e2724eb14ae96261 137 Gene3D G3DSA:3.30.160.250 1 98 1.0E-21 T 11-10-2018 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 SUPERFAMILY SSF46589 1 113 1.41E-31 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 4.9E-31 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 2.6E-177 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 43.172 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 3.0E-33 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 Gene3D G3DSA:3.30.930.10 106 425 3.1E-125 T 11-10-2018 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 Gene3D G3DSA:1.10.287.40 1 105 7.1E-25 T 11-10-2018 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 6.1E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 6.1E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 6.1E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 6.1E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 6.1E-32 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 SUPERFAMILY SSF55681 117 420 4.97E-105 T 11-10-2018 ABE28_000030 e00a94365aaa8db159fc8a0319e1bba9 425 PIRSF PIRSF001529 1 425 3.1E-187 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 Pfam PF12728 Helix-turn-helix domain 7 53 2.5E-14 T 11-10-2018 ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 Gene3D G3DSA:1.10.1660.10 5 55 3.1E-8 T 11-10-2018 ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 SUPERFAMILY SSF53850 81 289 2.5E-13 T 11-10-2018 ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 Pfam PF12727 PBP superfamily domain 91 272 1.3E-58 T 11-10-2018 IPR024370 PBP domain ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 7 53 1.2E-15 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ABE28_020410 2168e3b4ec174570fa4e22521f5169c9 306 SUPERFAMILY SSF46955 7 53 6.23E-6 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 Gene3D G3DSA:3.90.1170.20 13 272 2.5E-99 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 272 7.4E-59 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 Gene3D G3DSA:3.20.20.70 123 265 2.5E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 1.5E-96 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 19 107 2.6E-23 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 SUPERFAMILY SSF54675 3 108 7.85E-27 T 11-10-2018 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 PIRSF PIRSF006250 1 278 5.2E-91 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 ABE28_016275 c6a6ded3f6e0a16a99ba4f9880e9d857 283 SUPERFAMILY SSF51690 109 274 1.45E-58 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABE28_022665 57162f407440e2d064c339c1163ed7f8 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 3.7E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_022665 57162f407440e2d064c339c1163ed7f8 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 74 8.4E-18 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABE28_022665 57162f407440e2d064c339c1163ed7f8 300 SUPERFAMILY SSF161098 93 285 3.92E-30 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022665 57162f407440e2d064c339c1163ed7f8 300 Gene3D G3DSA:1.10.3720.10 87 300 2.6E-24 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 SMART SM00481 3 70 3.1E-20 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 SUPERFAMILY SSF89550 3 254 1.26E-12 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 Gene3D G3DSA:1.10.10.1600 415 492 1.3E-21 T 11-10-2018 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 Pfam PF14579 Helix-hairpin-helix motif 778 865 5.8E-24 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 Gene3D G3DSA:3.20.20.140 1 260 4.5E-80 T 11-10-2018 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 2 992 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 704 2.1E-173 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_017020 f10906cdfbd50ea7d58daaea5b415349 1119 Pfam PF02811 PHP domain 4 163 1.5E-32 T 11-10-2018 IPR004013 PHP domain GO:0003824 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 SMART SM00382 52 183 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Gene3D G3DSA:1.10.10.10 258 332 1.7E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 6 236 3.3E-117 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 2.3E-146 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 3.9E-34 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 SUPERFAMILY SSF52540 21 255 2.56E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 SUPERFAMILY SSF46785 257 331 2.0E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 251 332 2.0E-35 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 332 172.947 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Gene3D G3DSA:3.40.50.300 19 182 3.3E-40 T 11-10-2018 ABE28_016220 a051dfd5994f223e94fd1d5642562a9f 332 Gene3D G3DSA:1.10.8.60 183 257 3.8E-30 T 11-10-2018 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 29 256 40.202 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 SUPERFAMILY SSF64005 27 250 3.01E-88 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 36 255 2.7E-85 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 Gene3D G3DSA:3.40.1180.10 11 257 1.2E-100 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 29 255 3.6E-88 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 ABE28_008115 0788725467b5a04b5ebfeefa65273f7b 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 201 218 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 ABE28_021565 5e148f08dd127530ecd4b65d9036e4f8 405 Gene3D G3DSA:3.50.50.100 1 405 7.1E-139 T 11-10-2018 ABE28_021565 5e148f08dd127530ecd4b65d9036e4f8 405 SUPERFAMILY SSF51905 6 341 3.67E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021565 5e148f08dd127530ecd4b65d9036e4f8 405 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 325 2.2E-45 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 Gene3D G3DSA:3.40.50.720 1 255 4.9E-81 T 11-10-2018 ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 SUPERFAMILY SSF51735 4 250 5.41E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.6E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 4.2E-65 T 11-10-2018 ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 2.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 2.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_011520 58b66d000b452e525f43163fd2b3d25d 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 2.9E-11 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_021150 d0ae35fa3cd242d9ef6773f380c8d389 392 SMART SM00833 257 372 1.3E-52 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_021150 d0ae35fa3cd242d9ef6773f380c8d389 392 Gene3D G3DSA:3.40.50.300 3 230 1.1E-71 T 11-10-2018 ABE28_021150 d0ae35fa3cd242d9ef6773f380c8d389 392 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 7 211 1.2E-56 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain ABE28_021150 d0ae35fa3cd242d9ef6773f380c8d389 392 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 257 372 5.5E-26 T 11-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal ABE28_021150 d0ae35fa3cd242d9ef6773f380c8d389 392 SUPERFAMILY SSF52540 3 301 2.74E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 Pfam PF02780 Transketolase, C-terminal domain 181 301 5.6E-32 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 SUPERFAMILY SSF52518 6 171 9.51E-49 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 Pfam PF02779 Transketolase, pyrimidine binding domain 8 165 1.1E-30 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 SUPERFAMILY SSF52922 177 310 1.96E-36 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 Gene3D G3DSA:3.40.50.970 2 179 2.0E-55 T 11-10-2018 ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 Gene3D G3DSA:3.40.50.920 181 314 2.3E-42 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_005015 6fb80502875683911737c1d1db5ec6e7 315 SMART SM00861 5 170 2.9E-43 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_022130 64cc3693a9f058df636589894d25b378 511 SUPERFAMILY SSF53649 4 509 6.41E-75 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_022130 64cc3693a9f058df636589894d25b378 511 Pfam PF01676 Metalloenzyme superfamily 5 499 3.5E-80 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 ABE28_022130 64cc3693a9f058df636589894d25b378 511 Gene3D G3DSA:3.40.1450.10 77 312 3.0E-233 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022130 64cc3693a9f058df636589894d25b378 511 SUPERFAMILY SSF64158 77 310 5.36E-92 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022130 64cc3693a9f058df636589894d25b378 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 509 5.3E-212 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022130 64cc3693a9f058df636589894d25b378 511 Gene3D G3DSA:3.40.720.10 5 509 3.0E-233 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABE28_022130 64cc3693a9f058df636589894d25b378 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 2.4E-84 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022130 64cc3693a9f058df636589894d25b378 511 PIRSF PIRSF001492 1 511 3.7E-205 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022130 64cc3693a9f058df636589894d25b378 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.846 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 SUPERFAMILY SSF56327 150 308 1.87E-52 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 150 308 3.7E-28 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 Gene3D G3DSA:3.90.110.10 149 309 9.7E-61 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 SUPERFAMILY SSF51735 3 146 1.58E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 6 146 1.7E-41 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 4 310 3.5E-158 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 Gene3D G3DSA:3.40.50.720 1 148 4.3E-59 T 11-10-2018 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 5.5E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 5.5E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 5.5E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PRINTS PR00086 L-lactate dehydrogenase signature 6 30 5.5E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PRINTS PR00086 L-lactate dehydrogenase signature 32 56 5.5E-30 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 PIRSF PIRSF000102 1 311 2.7E-102 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 ABE28_016950 443a4e9f2cdec877a8cbc142f2259cd5 311 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 311 46.508 T 11-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 SUPERFAMILY SSF52540 3 227 6.31E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 SMART SM00382 29 225 4.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 SMART SM00382 282 510 22.0 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 Pfam PF00005 ABC transporter 21 169 3.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 Gene3D G3DSA:3.40.50.300 252 495 2.2E-42 T 11-10-2018 ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 Gene3D G3DSA:3.40.50.300 1 236 9.3E-55 T 11-10-2018 ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 SUPERFAMILY SSF52540 255 490 7.48E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 Pfam PF00005 ABC transporter 274 429 4.8E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_008275 d11b3430e64a0067bee02610ebca8582 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_016185 9408c3d77e4f8d41123391cedeef4c46 520 Pfam PF01943 Polysaccharide biosynthesis protein 4 304 1.1E-56 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_016185 9408c3d77e4f8d41123391cedeef4c46 520 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 497 1.5E-16 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_016185 9408c3d77e4f8d41123391cedeef4c46 520 PIRSF PIRSF038958 1 514 1.1E-168 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_016185 9408c3d77e4f8d41123391cedeef4c46 520 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 4 491 2.2E-172 T 11-10-2018 IPR014249 Sporulation stage V protein B ABE28_020395 f30c2bfcd62a41260773fa7616931fae 165 Pfam PF04892 VanZ like family 14 147 6.8E-27 T 11-10-2018 IPR006976 VanZ-like ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Gene3D G3DSA:1.10.275.50 28 113 9.4E-10 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 SUPERFAMILY SSF48557 35 470 6.6E-97 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00145 Argininosuccinate lyase family signature 149 169 1.0E-25 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00145 Argininosuccinate lyase family signature 282 298 1.0E-25 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00145 Argininosuccinate lyase family signature 108 130 1.0E-25 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00145 Argininosuccinate lyase family signature 238 262 1.0E-25 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00145 Argininosuccinate lyase family signature 200 216 1.0E-25 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Gene3D G3DSA:1.10.40.30 370 447 7.5E-111 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Pfam PF00206 Lyase 57 307 2.4E-45 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 TIGRFAM TIGR00838 argH: argininosuccinate lyase 36 470 8.0E-101 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Pfam PF14698 Argininosuccinate lyase C-terminal 373 445 2.2E-12 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Hamap MF_00006 Argininosuccinate lyase [argH]. 9 468 29.19 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 Gene3D G3DSA:1.20.200.10 114 459 7.5E-111 T 11-10-2018 ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00149 Fumarate lyase superfamily signature 109 127 6.0E-13 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00149 Fumarate lyase superfamily signature 154 172 6.0E-13 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_002865 7c4bdf0ac9516857a15112385718514a 494 PRINTS PR00149 Fumarate lyase superfamily signature 282 298 6.0E-13 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_009360 314a33b910f6d7444410375891da5e65 178 Pfam PF01527 Transposase 3 52 7.7E-9 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ABE28_009360 314a33b910f6d7444410375891da5e65 178 SUPERFAMILY SSF46689 56 156 1.11E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_009360 314a33b910f6d7444410375891da5e65 178 SUPERFAMILY SSF46689 2 53 1.43E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_009360 314a33b910f6d7444410375891da5e65 178 Pfam PF13518 Helix-turn-helix domain 64 116 4.3E-9 T 11-10-2018 ABE28_014975 c2b6be9868584a8d3d18b6c38b36708b 222 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 32 222 3.3E-59 T 11-10-2018 IPR014195 Sporulation stage III, protein AG ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 Gene3D G3DSA:1.10.490.80 577 675 1.1E-29 T 11-10-2018 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 11-10-2018 IPR025505 FHIPEP conserved site ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 Gene3D G3DSA:3.40.30.60 342 485 3.2E-53 T 11-10-2018 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 7.9E-54 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 Gene3D G3DSA:1.10.8.540 486 575 2.0E-30 T 11-10-2018 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 Pfam PF00771 FHIPEP family 15 667 1.3E-271 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 5.9E-274 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 ABE28_008045 b1c472c070f967b52806d68463f1c5d7 678 PIRSF PIRSF005419 1 678 1.2E-255 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 ABE28_005880 7c0c14acd875e7d7d658f71d5325a7d2 135 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 118 5.0E-6 T 11-10-2018 IPR024496 Spore germination protein GerPE ABE28_005880 7c0c14acd875e7d7d658f71d5325a7d2 135 Pfam PF10970 Spore germination protein GerPE 5 119 8.0E-31 T 11-10-2018 IPR024496 Spore germination protein GerPE ABE28_013885 dc793d84a9e41e4c7e7ab474ce92ee1f 222 Gene3D G3DSA:3.30.420.10 69 213 1.7E-25 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_013885 dc793d84a9e41e4c7e7ab474ce92ee1f 222 Pfam PF13456 Reverse transcriptase-like 74 199 1.7E-14 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ABE28_013885 dc793d84a9e41e4c7e7ab474ce92ee1f 222 SUPERFAMILY SSF53098 69 204 1.01E-17 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 Gene3D G3DSA:3.30.1490.110 80 173 1.2E-34 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 SUPERFAMILY SSF53067 207 379 7.09E-31 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 Gene3D G3DSA:3.90.640.10 239 295 1.2E-34 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 Pfam PF14450 Cell division protein FtsA 211 347 2.1E-9 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 Gene3D G3DSA:3.30.420.40 8 200 1.2E-34 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 SMART SM00842 5 200 1.9E-41 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 Gene3D G3DSA:3.30.420.40 201 347 1.2E-34 T 11-10-2018 ABE28_017335 4b2527401451e7793b7054f5e884ac04 713 SUPERFAMILY SSF53067 6 196 1.94E-19 T 11-10-2018 ABE28_001315 93306f5c93169631e258df23d0da5163 297 SMART SM00046 5 131 1.9E-9 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_001315 93306f5c93169631e258df23d0da5163 297 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 127 2.9E-30 T 11-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 ABE28_001315 93306f5c93169631e258df23d0da5163 297 Gene3D G3DSA:2.60.200.40 126 281 9.7E-80 T 11-10-2018 ABE28_001315 93306f5c93169631e258df23d0da5163 297 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 296 1.8E-82 T 11-10-2018 IPR005218 Diacylglycerol/lipid kinase ABE28_001315 93306f5c93169631e258df23d0da5163 297 SUPERFAMILY SSF111331 2 296 1.14E-71 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_001315 93306f5c93169631e258df23d0da5163 297 Gene3D G3DSA:3.40.50.10330 7 125 9.7E-80 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_002805 4948fe5ee4d77a460ba75a167f076299 466 Pfam PF03606 C4-dicarboxylate anaerobic carrier 18 458 3.4E-112 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 SUPERFAMILY SSF52540 80 378 2.5E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023785 4a72193edf01f25665819ab33337c10a 461 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 461 3.6E-130 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 PRINTS PR00449 Transforming protein P21 ras signature 328 341 2.5E-5 T 11-10-2018 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 PRINTS PR00449 Transforming protein P21 ras signature 264 286 2.5E-5 T 11-10-2018 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 PRINTS PR00449 Transforming protein P21 ras signature 224 245 2.5E-5 T 11-10-2018 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Gene3D G3DSA:3.30.1360.120 1 126 1.4E-47 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 227 374 2.9E-28 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Gene3D G3DSA:1.20.120.430 127 461 6.3E-107 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 461 34.517 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Pfam PF12631 MnmE helical domain 129 458 1.8E-59 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Gene3D G3DSA:3.40.50.300 224 389 6.3E-107 T 11-10-2018 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 126 4.0E-41 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 ABE28_023785 4a72193edf01f25665819ab33337c10a 461 Pfam PF01926 50S ribosome-binding GTPase 227 338 1.6E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_004495 ef6ab7c392995aeddf7e2feb2e553ef3 389 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 218 382 5.6E-29 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_004495 ef6ab7c392995aeddf7e2feb2e553ef3 389 Gene3D G3DSA:3.30.300.210 234 385 3.3E-23 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_004495 ef6ab7c392995aeddf7e2feb2e553ef3 389 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 7 384 1.7E-65 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_007325 74af30d4358dccc2014ae1c44e279809 111 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 4 110 4.9E-47 T 11-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 ABE28_007325 74af30d4358dccc2014ae1c44e279809 111 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 30 102 1.7E-14 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ABE28_023330 6a91a678e7f6b8e930799a7ef0362adb 317 SUPERFAMILY SSF56059 85 284 5.77E-20 T 11-10-2018 ABE28_023330 6a91a678e7f6b8e930799a7ef0362adb 317 Pfam PF08443 RimK-like ATP-grasp domain 96 207 1.8E-5 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABE28_000045 5fb2e00ed4f713a980b600ca0f0e4ace 219 Pfam PF01712 Deoxynucleoside kinase 7 206 1.9E-48 T 11-10-2018 IPR031314 Deoxynucleoside kinase domain ABE28_000045 5fb2e00ed4f713a980b600ca0f0e4ace 219 SUPERFAMILY SSF52540 1 205 1.8E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000045 5fb2e00ed4f713a980b600ca0f0e4ace 219 Gene3D G3DSA:3.40.50.300 5 208 1.1E-49 T 11-10-2018 ABE28_000045 5fb2e00ed4f713a980b600ca0f0e4ace 219 PIRSF PIRSF000705 1 212 2.3E-58 T 11-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 Gene3D G3DSA:1.10.260.40 1 79 6.5E-20 T 11-10-2018 ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 SUPERFAMILY SSF47413 3 71 8.58E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 SMART SM00530 11 66 5.3E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 Gene3D G3DSA:2.60.120.10 91 184 1.3E-29 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 SUPERFAMILY SSF51182 59 183 8.09E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 Pfam PF01381 Helix-turn-helix 12 64 4.8E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_024015 b21525a76f84c737504aa99bfadfcdf4 184 Pfam PF07883 Cupin domain 110 176 1.8E-12 T 11-10-2018 IPR013096 Cupin 2, conserved barrel ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 Pfam PF00994 Probable molybdopterin binding domain 18 161 3.9E-37 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 Gene3D G3DSA:3.40.980.10 1 169 5.1E-51 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 SMART SM00852 17 162 1.3E-29 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 SUPERFAMILY SSF53218 13 167 4.97E-43 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 32 100 0.008 T 11-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 PIRSF PIRSF006443 1 170 3.2E-66 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 ABE28_017100 28ca4fdf21943e3d1c3168bea99760b0 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 157 2.9E-38 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_014720 68a0aa7df1d7d360b4ee82f4d2a87d0c 132 SUPERFAMILY SSF55136 21 132 5.75E-6 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_014720 68a0aa7df1d7d360b4ee82f4d2a87d0c 132 SMART SM00871 6 132 0.0042 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding ABE28_014720 68a0aa7df1d7d360b4ee82f4d2a87d0c 132 Gene3D G3DSA:3.20.80.10 4 132 6.9E-24 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_014720 68a0aa7df1d7d360b4ee82f4d2a87d0c 132 Pfam PF14526 Integron-associated effector binding protein 16 130 1.4E-10 T 11-10-2018 IPR029441 Integron-associated effector binding protein ABE28_015575 30265210b76fc3d21225adee64210bcb 207 Pfam PF12836 Helix-hairpin-helix motif 142 204 9.5E-23 T 11-10-2018 ABE28_015575 30265210b76fc3d21225adee64210bcb 207 Gene3D G3DSA:1.10.150.280 140 206 1.1E-22 T 11-10-2018 ABE28_015575 30265210b76fc3d21225adee64210bcb 207 Pfam PF10531 SLBB domain 65 119 1.7E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_015575 30265210b76fc3d21225adee64210bcb 207 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 144 205 3.5E-23 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain ABE28_015575 30265210b76fc3d21225adee64210bcb 207 SUPERFAMILY SSF47781 124 206 1.56E-28 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_015575 30265210b76fc3d21225adee64210bcb 207 SMART SM00278 154 173 0.059 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_015575 30265210b76fc3d21225adee64210bcb 207 SMART SM00278 184 203 4.3 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 ABE28_013330 f3243e1f5e4e94b1204fba24925e9189 280 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 58 250 2.7E-28 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_013330 f3243e1f5e4e94b1204fba24925e9189 280 Gene3D G3DSA:3.40.50.1110 23 257 9.4E-38 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_013330 f3243e1f5e4e94b1204fba24925e9189 280 SUPERFAMILY SSF52266 50 259 8.18E-38 T 11-10-2018 ABE28_001585 b10990a2db2d26adfde143ba15312a05 165 Pfam PF00583 Acetyltransferase (GNAT) family 19 139 9.8E-14 T 11-10-2018 IPR000182 GNAT domain ABE28_001585 b10990a2db2d26adfde143ba15312a05 165 Gene3D G3DSA:3.40.630.30 2 159 1.5E-36 T 11-10-2018 ABE28_001585 b10990a2db2d26adfde143ba15312a05 165 SUPERFAMILY SSF55729 1 155 1.55E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003010 e41add80ec2b84ea6d6a7ca24b183d6d 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 224 3.0E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_003010 e41add80ec2b84ea6d6a7ca24b183d6d 235 SUPERFAMILY SSF161098 15 213 9.42E-39 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003010 e41add80ec2b84ea6d6a7ca24b183d6d 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 118 1.6E-20 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_003010 e41add80ec2b84ea6d6a7ca24b183d6d 235 Gene3D G3DSA:1.10.3720.10 4 228 1.5E-47 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_008545 4c0ae4f217a7bc52c7bb9538300e1310 308 Pfam PF07859 alpha/beta hydrolase fold 76 285 3.2E-72 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 ABE28_008545 4c0ae4f217a7bc52c7bb9538300e1310 308 SUPERFAMILY SSF53474 42 306 6.04E-68 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_008545 4c0ae4f217a7bc52c7bb9538300e1310 308 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 148 160 - T 11-10-2018 IPR033140 Lipase, GDXG, putative serine active site ABE28_008545 4c0ae4f217a7bc52c7bb9538300e1310 308 Gene3D G3DSA:3.40.50.1820 3 308 1.0E-87 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_008545 4c0ae4f217a7bc52c7bb9538300e1310 308 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 - T 11-10-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0016787 Reactome: R-HSA-163560 ABE28_001425 34dee5b56b4e4f4260377cbb4819e9c0 157 SUPERFAMILY SSF55874 35 136 3.76E-13 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001425 34dee5b56b4e4f4260377cbb4819e9c0 157 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 157 39.254 T 11-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 ABE28_001425 34dee5b56b4e4f4260377cbb4819e9c0 157 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 153 5.5E-70 T 11-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 ABE28_001425 34dee5b56b4e4f4260377cbb4819e9c0 157 Gene3D G3DSA:3.30.565.10 6 154 1.3E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001425 34dee5b56b4e4f4260377cbb4819e9c0 157 Pfam PF13581 Histidine kinase-like ATPase domain 12 141 1.2E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_020700 230a8b82660a79b7dbbbd8722fbff559 80 SUPERFAMILY SSF88697 1 80 7.45E-30 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_020700 230a8b82660a79b7dbbbd8722fbff559 80 Gene3D G3DSA:2.40.240.20 1 77 1.6E-34 T 11-10-2018 ABE28_020700 230a8b82660a79b7dbbbd8722fbff559 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 3.0E-35 T 11-10-2018 IPR019699 Protein of unknown function DUF2584 ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 Pfam PF00854 POT family 96 463 3.8E-78 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 SUPERFAMILY SSF103473 20 486 1.06E-30 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 158 170 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 16 492 1.2E-131 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 Gene3D G3DSA:1.20.1250.20 1 496 7.7E-151 T 11-10-2018 ABE28_020485 d0e4a985bf5ed99e5c3ae7c4edd72e97 496 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 84 108 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 ABE28_018580 894d66390796083601cadca7290f9547 84 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 82 2.1E-31 T 11-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein ABE28_018580 894d66390796083601cadca7290f9547 84 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 83 3.0E-15 T 11-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein ABE28_008750 d2bbd0a1658bbd242932d488427a184f 134 ProSitePatterns PS00552 MerR-type HTH domain signature. 16 38 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_008750 d2bbd0a1658bbd242932d488427a184f 134 Gene3D G3DSA:1.10.1660.10 3 84 8.6E-26 T 11-10-2018 ABE28_008750 d2bbd0a1658bbd242932d488427a184f 134 SMART SM00422 13 81 4.1E-27 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_008750 d2bbd0a1658bbd242932d488427a184f 134 Pfam PF13411 MerR HTH family regulatory protein 13 78 7.6E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_008750 d2bbd0a1658bbd242932d488427a184f 134 SUPERFAMILY SSF46955 13 111 3.2E-20 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 182 7.1E-43 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 314 1.5E-25 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 SUPERFAMILY SSF53738 30 234 1.45E-47 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 448 1.8E-23 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 SUPERFAMILY SSF53738 304 454 5.89E-33 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 SUPERFAMILY SSF53738 210 315 1.41E-19 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 5.4E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 SUPERFAMILY SSF55957 447 573 7.85E-14 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Gene3D G3DSA:3.30.310.50 480 568 2.0E-8 T 11-10-2018 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Gene3D G3DSA:3.40.120.10 33 189 2.5E-47 T 11-10-2018 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Gene3D G3DSA:3.40.120.10 209 324 3.3E-23 T 11-10-2018 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 508 558 1.8E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 ABE28_020215 22ad8a1a9fc5dcaf67de33d519f710b6 579 Gene3D G3DSA:3.40.120.10 325 452 9.4E-38 T 11-10-2018 ABE28_021275 3cbd0dd9ddcb9533e18525bcd6c57681 437 PIRSF PIRSF006060 1 437 1.2E-85 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_021275 3cbd0dd9ddcb9533e18525bcd6c57681 437 Pfam PF13520 Amino acid permease 10 419 6.2E-65 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_021275 3cbd0dd9ddcb9533e18525bcd6c57681 437 Gene3D G3DSA:1.20.1740.10 4 437 5.1E-95 T 11-10-2018 ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Gene3D G3DSA:3.10.50.10 397 455 1.0E-76 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SMART SM00257 68 111 3.4E-15 T 11-10-2018 IPR018392 LysM domain ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SMART SM00257 116 159 1.4E-14 T 11-10-2018 IPR018392 LysM domain ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Gene3D G3DSA:3.20.20.80 209 489 1.0E-76 T 11-10-2018 ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SUPERFAMILY SSF51445 195 491 3.16E-42 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Pfam PF01476 LysM domain 117 159 3.5E-14 T 11-10-2018 IPR018392 LysM domain ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Pfam PF01476 LysM domain 69 111 1.5E-14 T 11-10-2018 IPR018392 LysM domain ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SMART SM00636 186 484 8.6E-12 T 11-10-2018 IPR011583 Chitinase II GO:0008061 ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SUPERFAMILY SSF54106 67 111 8.63E-11 T 11-10-2018 ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Pfam PF00704 Glycosyl hydrolases family 18 234 482 2.7E-28 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Gene3D G3DSA:3.10.350.10 114 164 8.1E-16 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 Gene3D G3DSA:3.10.350.10 57 113 1.1E-15 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_019920 c91972ac77eb540d5d28be957cc8dd94 495 SUPERFAMILY SSF54106 115 159 1.83E-10 T 11-10-2018 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 3.8E-118 T 11-10-2018 IPR008007 Peptidase M42 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 SUPERFAMILY SSF101821 73 182 1.14E-34 T 11-10-2018 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 Gene3D G3DSA:3.40.630.10 13 345 1.3E-136 T 11-10-2018 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 PIRSF PIRSF001123 4 361 2.8E-150 T 11-10-2018 IPR008007 Peptidase M42 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 SUPERFAMILY SSF53187 6 358 9.56E-70 T 11-10-2018 ABE28_016830 f694bcf1eff805af1dfec80eedaa50b9 361 Gene3D G3DSA:2.40.30.40 77 164 1.3E-136 T 11-10-2018 IPR023367 Peptidase M42, domain 2 ABE28_023185 6eb14c49ebc122f8b988f392745eae50 140 Gene3D G3DSA:1.10.10.10 1 140 2.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023185 6eb14c49ebc122f8b988f392745eae50 140 Pfam PF13463 Winged helix DNA-binding domain 34 96 1.2E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_023185 6eb14c49ebc122f8b988f392745eae50 140 SMART SM00347 24 123 4.9E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_023185 6eb14c49ebc122f8b988f392745eae50 140 SUPERFAMILY SSF46785 6 137 6.72E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010025 616cc4d249b58790029b7c3cfb9f74b7 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 9.5E-63 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 4.6E-95 T 11-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 Pfam PF00578 AhpC/TSA family 4 133 1.5E-37 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 2.8E-7 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 SUPERFAMILY SSF52833 1 186 6.35E-60 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 Gene3D G3DSA:3.40.30.10 1 186 2.1E-68 T 11-10-2018 ABE28_014525 37e5c90185abfb228a8b8a3798a0bca3 187 PIRSF PIRSF000239 1 187 5.9E-58 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 ABE28_023135 919d596fb56303b315c9b1ec98ef37d8 477 Gene3D G3DSA:3.30.870.10 289 448 1.7E-26 T 11-10-2018 ABE28_023135 919d596fb56303b315c9b1ec98ef37d8 477 SUPERFAMILY SSF56024 283 452 9.2E-18 T 11-10-2018 ABE28_023135 919d596fb56303b315c9b1ec98ef37d8 477 SUPERFAMILY SSF56024 63 257 3.02E-11 T 11-10-2018 ABE28_023135 919d596fb56303b315c9b1ec98ef37d8 477 Pfam PF13091 PLD-like domain 304 440 2.4E-25 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_013440 386bcea60b769b2d8fa0362051222e4f 214 Gene3D G3DSA:1.10.472.50 1 99 5.9E-30 T 11-10-2018 ABE28_013440 386bcea60b769b2d8fa0362051222e4f 214 SUPERFAMILY SSF109604 2 212 1.91E-65 T 11-10-2018 ABE28_013440 386bcea60b769b2d8fa0362051222e4f 214 Gene3D G3DSA:1.20.58.1910 100 214 5.7E-46 T 11-10-2018 ABE28_013440 386bcea60b769b2d8fa0362051222e4f 214 SMART SM00471 21 135 1.7E-7 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_013440 386bcea60b769b2d8fa0362051222e4f 214 Pfam PF01966 HD domain 28 125 1.5E-7 T 11-10-2018 IPR006674 HD domain ABE28_016420 df81f8ec1c3571d6f9c6b50e3de7bc2a 281 Pfam PF08443 RimK-like ATP-grasp domain 98 272 1.0E-16 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABE28_016420 df81f8ec1c3571d6f9c6b50e3de7bc2a 281 SUPERFAMILY SSF56059 90 274 2.79E-30 T 11-10-2018 ABE28_016420 df81f8ec1c3571d6f9c6b50e3de7bc2a 281 Gene3D G3DSA:3.40.50.20 24 114 1.4E-7 T 11-10-2018 ABE28_016420 df81f8ec1c3571d6f9c6b50e3de7bc2a 281 Gene3D G3DSA:3.30.470.80 171 280 2.4E-22 T 11-10-2018 ABE28_000750 712966a6d2ec4c6fd35d76235c890cdd 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 9.4E-48 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 ABE28_000750 712966a6d2ec4c6fd35d76235c890cdd 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 ABE28_000750 712966a6d2ec4c6fd35d76235c890cdd 130 Gene3D G3DSA:3.30.230.10 1 130 1.4E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000750 712966a6d2ec4c6fd35d76235c890cdd 130 SUPERFAMILY SSF54211 5 130 5.56E-51 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000750 712966a6d2ec4c6fd35d76235c890cdd 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.286 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid ABE28_003085 966e5d9fa2e7ff315bebcb7c703fd2b9 118 Gene3D G3DSA:1.10.260.40 4 117 7.2E-21 T 11-10-2018 ABE28_003085 966e5d9fa2e7ff315bebcb7c703fd2b9 118 Pfam PF01381 Helix-turn-helix 8 68 9.5E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_003085 966e5d9fa2e7ff315bebcb7c703fd2b9 118 SUPERFAMILY SSF47413 1 73 1.49E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_003085 966e5d9fa2e7ff315bebcb7c703fd2b9 118 SMART SM00530 7 68 1.7E-8 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SUPERFAMILY SSF50249 211 628 3.81E-150 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Pfam PF00575 S1 RNA binding domain 628 710 1.0E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 TIGRFAM TIGR02063 RNase_R: ribonuclease R 10 711 8.8E-288 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SMART SM00955 251 581 5.9E-185 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Gene3D G3DSA:2.40.50.140 632 738 1.6E-24 T 11-10-2018 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Hamap MF_01895 Ribonuclease R [rnr]. 27 711 61.489 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Gene3D G3DSA:2.40.50.140 61 138 1.5E-18 T 11-10-2018 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Gene3D G3DSA:2.40.50.140 140 206 1.2E-9 T 11-10-2018 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 60 711 1.1E-246 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Pfam PF00773 RNB domain 251 580 6.0E-116 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SUPERFAMILY SSF50249 57 138 7.28E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SUPERFAMILY SSF50249 129 228 4.99E-20 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Pfam PF08206 Ribonuclease B OB domain 150 204 1.3E-9 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 Pfam PF08206 Ribonuclease B OB domain 76 135 5.3E-22 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SMART SM00357 141 205 3.3E-8 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SMART SM00357 75 136 2.2E-11 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SMART SM00316 629 711 4.4E-19 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 SUPERFAMILY SSF50249 629 713 1.19E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022080 0d9a05d1d5c5a0a6118ec49dfa6cf29a 789 ProSitePatterns PS01175 Ribonuclease II family signature. 548 572 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site ABE28_014375 0651002f62ec95876589cc876d90a391 219 Gene3D G3DSA:2.40.10.220 99 210 1.1E-7 T 11-10-2018 ABE28_014375 0651002f62ec95876589cc876d90a391 219 Pfam PF12945 Flagellar protein YcgR 3 89 1.1E-15 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal ABE28_014375 0651002f62ec95876589cc876d90a391 219 SUPERFAMILY SSF141371 98 205 3.92E-7 T 11-10-2018 ABE28_014375 0651002f62ec95876589cc876d90a391 219 Pfam PF07238 PilZ domain 98 207 2.7E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 11-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 SUPERFAMILY SSF53335 3 274 4.48E-87 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 41.513 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 Gene3D G3DSA:2.30.140.10 2 52 5.6E-24 T 11-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 Pfam PF01564 Spermine/spermidine synthase domain 58 236 2.3E-69 T 11-10-2018 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 Gene3D G3DSA:3.40.50.150 53 274 2.4E-76 T 11-10-2018 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 4.2E-122 T 11-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ABE28_023055 5e24f914866ba4e04be1d297cb3a859b 275 Pfam PF17284 Spermidine synthase tetramerisation domain 3 54 4.5E-18 T 11-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 ABE28_021440 492379cbd3c8c88eddd2c3fb4ce3d4a9 128 SMART SM01298 16 128 7.5E-67 T 11-10-2018 IPR014916 Kinase associated protein B ABE28_021440 492379cbd3c8c88eddd2c3fb4ce3d4a9 128 SUPERFAMILY SSF141251 5 127 8.24E-51 T 11-10-2018 IPR038080 Kinase associated protein B superfamily ABE28_021440 492379cbd3c8c88eddd2c3fb4ce3d4a9 128 Gene3D G3DSA:2.30.30.430 1 127 2.3E-53 T 11-10-2018 IPR038080 Kinase associated protein B superfamily ABE28_021440 492379cbd3c8c88eddd2c3fb4ce3d4a9 128 Pfam PF08810 Kinase associated protein B 16 127 6.0E-48 T 11-10-2018 IPR014916 Kinase associated protein B ABE28_004170 aa1c62b0701ae12d6ea9431250361727 107 Pfam PF05145 Transition state regulatory protein AbrB 24 107 7.1E-10 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABE28_009225 158d1453703e69ed45c32b92530437c4 146 Pfam PF05119 Phage terminase, small subunit 20 109 2.9E-9 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 SMART SM00091 8 75 0.005 T 11-10-2018 IPR000014 PAS domain ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 SUPERFAMILY SSF55785 6 108 5.93E-10 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 363 372 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Gene3D G3DSA:1.10.10.60 421 464 3.9E-5 T 11-10-2018 ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 SUPERFAMILY SSF52540 149 393 1.05E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 62 1.7E-7 T 11-10-2018 IPR000014 PAS domain ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 SUPERFAMILY SSF46689 413 463 2.11E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Pfam PF00158 Sigma-54 interaction domain 150 318 2.0E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 SMART SM00382 170 314 2.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Pfam PF13426 PAS domain 20 115 7.6E-6 T 11-10-2018 IPR000014 PAS domain ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Gene3D G3DSA:3.30.450.20 2 136 2.8E-13 T 11-10-2018 ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Gene3D G3DSA:3.40.50.300 137 321 6.5E-68 T 11-10-2018 ABE28_003990 760c55011d0f6462b0813d5683706b5d 467 Gene3D G3DSA:1.10.8.60 322 399 2.8E-26 T 11-10-2018 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 SUPERFAMILY SSF63380 92 194 9.35E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_002580 3299c7af1808adad826d490b17307a4e 212 PIRSF PIRSF000498 1 206 9.7E-74 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 Gene3D G3DSA:2.40.30.20 1 88 6.6E-31 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 Pfam PF00677 Lumazine binding domain 3 86 2.9E-23 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 Pfam PF00677 Lumazine binding domain 99 183 7.3E-19 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 Gene3D G3DSA:2.40.30.20 101 200 7.4E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 ABE28_002580 3299c7af1808adad826d490b17307a4e 212 SUPERFAMILY SSF63380 1 89 9.35E-27 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_002580 3299c7af1808adad826d490b17307a4e 212 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 197 3.2E-75 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 SUPERFAMILY SSF53850 89 296 6.38E-24 T 11-10-2018 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 Gene3D G3DSA:1.10.10.10 1 91 1.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-20 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 Gene3D G3DSA:3.40.190.10 92 288 2.1E-26 T 11-10-2018 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.5E-21 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 Gene3D G3DSA:3.40.190.10 161 268 2.1E-26 T 11-10-2018 ABE28_023925 757d171efa5acf7f69a7aaff07cee386 302 SUPERFAMILY SSF46785 1 85 2.44E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 1.3E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 SUPERFAMILY SSF46785 10 87 2.73E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 Gene3D G3DSA:3.40.1410.10 79 243 1.8E-46 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 SMART SM00866 96 237 2.0E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 1.8E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 1.8E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 SMART SM00345 16 75 4.2E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 Gene3D G3DSA:1.10.10.10 10 78 6.7E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 SUPERFAMILY SSF64288 63 242 2.51E-49 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_013630 cc8cd256c5d01b5cb1febda8b171f46c 243 Pfam PF07702 UTRA domain 97 236 4.5E-37 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_021080 5b0ef93c24f43a8a626b5c9ba7c894e9 133 Pfam PF00856 SET domain 59 111 3.3E-10 T 11-10-2018 IPR001214 SET domain GO:0005515 ABE28_021080 5b0ef93c24f43a8a626b5c9ba7c894e9 133 SMART SM00317 2 117 3.6E-6 T 11-10-2018 IPR001214 SET domain GO:0005515 ABE28_021080 5b0ef93c24f43a8a626b5c9ba7c894e9 133 PIRSF PIRSF022536 1 131 7.9E-31 T 11-10-2018 IPR009207 Histone methyltransferase, PBCV type putative KEGG: 00310+2.1.1.43 ABE28_021080 5b0ef93c24f43a8a626b5c9ba7c894e9 133 SUPERFAMILY SSF82199 12 113 7.59E-23 T 11-10-2018 ABE28_021080 5b0ef93c24f43a8a626b5c9ba7c894e9 133 Gene3D G3DSA:2.170.270.10 1 114 2.4E-28 T 11-10-2018 ABE28_013155 bd83454eed05f3b68f89addba828b625 260 SUPERFAMILY SSF56317 3 260 9.81E-73 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_013155 bd83454eed05f3b68f89addba828b625 260 Gene3D G3DSA:3.60.110.10 1 260 2.0E-92 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_013155 bd83454eed05f3b68f89addba828b625 260 Pfam PF00795 Carbon-nitrogen hydrolase 4 246 1.4E-52 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABE28_020045 fbfccf0b25d24db25d723d67b0504581 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 264 1.7E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_020045 fbfccf0b25d24db25d723d67b0504581 276 Gene3D G3DSA:1.10.3720.10 1 268 4.9E-65 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_020045 fbfccf0b25d24db25d723d67b0504581 276 SUPERFAMILY SSF161098 2 276 2.88E-68 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013280 8b944718b187dd3efe59e2974d92ba0f 237 SMART SM00882 9 221 1.0E-62 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_013280 8b944718b187dd3efe59e2974d92ba0f 237 Gene3D G3DSA:3.40.1080.10 7 223 1.2E-68 T 11-10-2018 ABE28_013280 8b944718b187dd3efe59e2974d92ba0f 237 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 12 221 8.9E-57 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABE28_013280 8b944718b187dd3efe59e2974d92ba0f 237 SUPERFAMILY SSF100950 7 223 4.08E-67 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_013280 8b944718b187dd3efe59e2974d92ba0f 237 Pfam PF01144 Coenzyme A transferase 13 219 4.3E-58 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 120 5.5E-39 T 11-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 SUPERFAMILY SSF51445 68 502 1.82E-126 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 SUPERFAMILY SSF81296 1 114 1.54E-28 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 SMART SM00642 138 496 1.1E-125 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Gene3D G3DSA:3.20.20.80 132 498 1.5E-158 T 11-10-2018 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 SUPERFAMILY SSF51011 506 581 3.67E-9 T 11-10-2018 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Gene3D G3DSA:3.90.400.10 245 298 1.5E-158 T 11-10-2018 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Pfam PF00128 Alpha amylase, catalytic domain 172 468 1.8E-81 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Gene3D G3DSA:2.60.40.1180 506 583 1.7E-11 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Gene3D G3DSA:2.60.40.10 1 123 5.6E-39 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_005930 6f4b88540f68b9ac5912e382ba9c1379 583 Pfam PF16657 Maltogenic Amylase, C-terminal domain 506 578 2.8E-7 T 11-10-2018 IPR032091 Maltogenic Amylase, C-terminal ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 Gene3D G3DSA:3.30.465.40 5 237 1.1E-76 T 11-10-2018 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 SUPERFAMILY SSF55103 220 459 9.16E-65 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 9.7E-178 T 11-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 Gene3D G3DSA:1.10.45.10 418 458 1.0E-10 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 SUPERFAMILY SSF56176 8 217 4.58E-72 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 Pfam PF01565 FAD binding domain 41 180 2.5E-41 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 2.8E-70 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABE28_016795 da7ef1695b44ad6d7ef23d27f3d5a3bc 470 Gene3D G3DSA:3.30.70.2740 336 417 1.0E-13 T 11-10-2018 ABE28_020120 65c01ca1541326d3e3af64a3864f3d6b 273 Gene3D G3DSA:3.40.50.300 1 262 4.0E-61 T 11-10-2018 ABE28_020120 65c01ca1541326d3e3af64a3864f3d6b 273 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_020120 65c01ca1541326d3e3af64a3864f3d6b 273 SUPERFAMILY SSF52540 6 239 1.89E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020120 65c01ca1541326d3e3af64a3864f3d6b 273 Pfam PF00005 ABC transporter 23 176 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_020120 65c01ca1541326d3e3af64a3864f3d6b 273 SMART SM00382 32 226 1.3E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 SUPERFAMILY SSF51735 1 185 3.39E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 281 2.4E-31 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 183 1.6E-58 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 Gene3D G3DSA:3.40.50.720 1 188 6.9E-63 T 11-10-2018 ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 PIRSF PIRSF000105 1 289 5.0E-87 T 11-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 SUPERFAMILY SSF48179 185 287 7.65E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_005135 c56d8185cb5d7d8788bd8835d26f199b 290 Gene3D G3DSA:1.10.1040.10 189 290 3.9E-32 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Gene3D G3DSA:1.20.140.10 235 379 2.0E-56 T 11-10-2018 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 SUPERFAMILY SSF47203 227 378 8.05E-60 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 PIRSF PIRSF016578 2 367 1.4E-17 T 11-10-2018 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Gene3D G3DSA:1.10.540.10 1 120 4.6E-50 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Gene3D G3DSA:2.40.110.10 121 234 5.5E-46 T 11-10-2018 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.0E-45 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 5.6E-26 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 376 1.3E-50 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_023005 58fc7d5273ea6e4a7208bcf3ae378658 379 SUPERFAMILY SSF56645 2 242 9.56E-98 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_019430 302528db3457bca3f918d268a9ab6156 490 SUPERFAMILY SSF51556 98 386 8.17E-45 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_019430 302528db3457bca3f918d268a9ab6156 490 SUPERFAMILY SSF51338 4 461 2.16E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019430 302528db3457bca3f918d268a9ab6156 490 Gene3D G3DSA:2.30.40.10 20 437 3.2E-85 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019430 302528db3457bca3f918d268a9ab6156 490 Pfam PF01979 Amidohydrolase family 74 436 1.5E-27 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_019430 302528db3457bca3f918d268a9ab6156 490 Gene3D G3DSA:3.20.20.140 58 387 3.2E-85 T 11-10-2018 ABE28_019725 cdeb47bf1e17ff31c67a5e6f9f02b74e 198 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 10 197 6.3E-80 T 11-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 ABE28_019725 cdeb47bf1e17ff31c67a5e6f9f02b74e 198 Pfam PF00510 Cytochrome c oxidase subunit III 21 196 1.1E-17 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019725 cdeb47bf1e17ff31c67a5e6f9f02b74e 198 Gene3D G3DSA:1.20.120.80 13 197 3.7E-50 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019725 cdeb47bf1e17ff31c67a5e6f9f02b74e 198 SUPERFAMILY SSF81452 17 195 2.35E-50 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 1 215 1.7E-80 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 23 178 3.3E-58 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 Gene3D G3DSA:3.30.2350.10 1 236 9.9E-89 T 11-10-2018 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 SUPERFAMILY SSF55120 1 223 1.44E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 1 302 19.15 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_008180 467c9b05e98b0d08b66451d9f3453fd1 306 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 236 1.1E-9 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 ABE28_019140 cf752c48dc179b4b067d9b29e6fe6753 401 SUPERFAMILY SSF53383 6 387 6.05E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_019140 cf752c48dc179b4b067d9b29e6fe6753 401 Gene3D G3DSA:3.90.1150.10 27 384 2.1E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_019140 cf752c48dc179b4b067d9b29e6fe6753 401 Pfam PF00155 Aminotransferase class I and II 33 384 5.7E-68 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_019140 cf752c48dc179b4b067d9b29e6fe6753 401 Gene3D G3DSA:3.40.640.10 44 285 2.1E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 Pfam PF00491 Arginase family 35 305 7.1E-82 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 PIRSF PIRSF036979 14 313 5.7E-96 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 Gene3D G3DSA:3.40.800.10 2 315 5.4E-104 T 11-10-2018 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 PRINTS PR00116 Arginase signature 234 263 4.0E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 PRINTS PR00116 Arginase signature 121 136 4.0E-13 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 ProSitePatterns PS01053 Arginase family signature. 237 258 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 SUPERFAMILY SSF52768 13 310 2.88E-96 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_003995 bfc81770479fc85c0f3bd7fcce91bab5 332 TIGRFAM TIGR01230 agmatinase: agmatinase 30 307 7.4E-66 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Pfam PF00391 PEP-utilising enzyme, mobile domain 155 226 1.0E-23 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 PIRSF PIRSF000732 1 571 3.0E-229 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 1.1E-130 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Pfam PF05524 PEP-utilising enzyme, N-terminal 7 127 1.5E-32 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 SUPERFAMILY SSF51621 250 549 8.9E-116 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 185 196 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 SUPERFAMILY SSF47831 24 144 2.62E-37 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 564 2.1E-254 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Gene3D G3DSA:3.50.30.10 7 234 9.4E-81 T 11-10-2018 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Gene3D G3DSA:3.20.20.60 235 571 2.7E-129 T 11-10-2018 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 Gene3D G3DSA:1.10.274.10 24 147 9.4E-81 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 SUPERFAMILY SSF52009 126 245 2.22E-37 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 2.9E-32 T 11-10-2018 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 2.9E-32 T 11-10-2018 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 2.9E-32 T 11-10-2018 ABE28_006985 f3648dc75e864dd5acf2116a93fc3cee 571 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 2.9E-32 T 11-10-2018 ABE28_018265 16390bb038f22f4a7f9212e06653649a 473 Gene3D G3DSA:1.20.1740.10 17 467 2.0E-60 T 11-10-2018 ABE28_018265 16390bb038f22f4a7f9212e06653649a 473 PIRSF PIRSF006060 9 472 2.5E-69 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_018265 16390bb038f22f4a7f9212e06653649a 473 Pfam PF00324 Amino acid permease 27 441 2.9E-82 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_018265 16390bb038f22f4a7f9212e06653649a 473 ProSitePatterns PS00218 Amino acid permeases signature. 51 81 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_018885 af4f3e1f24b377eccbb6768bc48f4281 343 Pfam PF14072 DNA-sulfur modification-associated 31 341 6.5E-29 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB ABE28_008475 1812b1d97fcb307d395ad77caadf3869 163 SUPERFAMILY SSF109854 11 157 1.31E-14 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_008475 1812b1d97fcb307d395ad77caadf3869 163 Pfam PF12867 DinB superfamily 17 155 4.9E-12 T 11-10-2018 IPR024775 DinB-like domain ABE28_008475 1812b1d97fcb307d395ad77caadf3869 163 Gene3D G3DSA:1.20.120.450 2 162 3.2E-20 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_003490 044a54835be30914da5ec4cbf3995020 322 Gene3D G3DSA:1.20.1530.20 6 312 1.7E-53 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ABE28_003490 044a54835be30914da5ec4cbf3995020 322 Pfam PF01758 Sodium Bile acid symporter family 43 214 1.5E-15 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 Gene3D G3DSA:3.30.300.20 1 116 5.6E-40 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 2.0E-40 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 SUPERFAMILY SSF89919 2 110 1.44E-36 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 4.0E-37 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 27.923 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABE28_008175 c401a839f4ddf2e8a8da0efc85a5f48c 122 Pfam PF02033 Ribosome-binding factor A 4 107 3.2E-34 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 2.2E-21 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Pfam PF01842 ACT domain 351 413 6.4E-9 T 11-10-2018 IPR002912 ACT domain ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 PIRSF PIRSF000098 1 429 9.9E-169 T 11-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 SUPERFAMILY SSF51735 1 158 1.33E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 SUPERFAMILY SSF55347 137 302 1.44E-52 T 11-10-2018 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Gene3D G3DSA:3.30.70.260 344 417 1.0E-145 T 11-10-2018 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 355 412 0.002 T 11-10-2018 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Gene3D G3DSA:3.40.50.720 4 340 1.0E-145 T 11-10-2018 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Gene3D G3DSA:3.30.360.10 136 343 1.0E-145 T 11-10-2018 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 Pfam PF00742 Homoserine dehydrogenase 137 315 3.6E-65 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 ABE28_021620 bf6295c4c13aec3c4049892f41647965 432 SUPERFAMILY SSF55021 348 421 5.6E-12 T 11-10-2018 ABE28_011280 84e9e9689333c1b711b00abcc4d90a27 68 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 4 19 - T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 ABE28_011280 84e9e9689333c1b711b00abcc4d90a27 68 Pfam PF01679 Proteolipid membrane potential modulator 1 45 1.6E-11 T 11-10-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 ABE28_014380 9f8329fccd97916ecdcbd09d14cb75c7 451 Pfam PF14620 YpeB sporulation 14 373 8.4E-127 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 ABE28_014380 9f8329fccd97916ecdcbd09d14cb75c7 451 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 440 8.1E-138 T 11-10-2018 IPR014239 Spore germination YpeB GO:0009847 ABE28_014380 9f8329fccd97916ecdcbd09d14cb75c7 451 Pfam PF03413 Peptidase propeptide and YPEB domain 377 437 0.0012 T 11-10-2018 IPR025711 PepSY domain ABE28_016360 3a708493a93dff7644ed1ce7536ef143 147 Pfam PF00575 S1 RNA binding domain 4 72 2.7E-18 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_016360 3a708493a93dff7644ed1ce7536ef143 147 SMART SM00316 4 73 4.0E-24 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_016360 3a708493a93dff7644ed1ce7536ef143 147 SUPERFAMILY SSF50249 4 79 5.72E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_016360 3a708493a93dff7644ed1ce7536ef143 147 Gene3D G3DSA:2.40.50.140 1 83 2.0E-26 T 11-10-2018 ABE28_020765 5b7271f17eab52bc055cefe4c35e4538 79 Pfam PF01809 Haemolytic domain 3 69 2.8E-31 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABE28_020765 5b7271f17eab52bc055cefe4c35e4538 79 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 2 70 25.676 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABE28_020765 5b7271f17eab52bc055cefe4c35e4538 79 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 17 69 2.0E-20 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABE28_020765 5b7271f17eab52bc055cefe4c35e4538 79 SMART SM01234 2 69 4.4E-47 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABE28_020765 5b7271f17eab52bc055cefe4c35e4538 79 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 6 77 5.0E-34 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 66 2.6E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 Gene3D G3DSA:1.10.357.10 60 205 7.2E-14 T 11-10-2018 ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 SUPERFAMILY SSF48498 92 202 1.33E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 SUPERFAMILY SSF46689 16 92 4.54E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 Gene3D G3DSA:1.10.10.60 13 59 2.0E-15 T 11-10-2018 ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 2.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_023000 86baa57b6f65e9bd904f43d8b102952b 216 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 2.9E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 49 67 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 254 7.1E-89 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 SUPERFAMILY SSF51366 23 255 5.3E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 256 34.043 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 Gene3D G3DSA:3.20.20.70 1 257 6.9E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007210 c0b349819ac8cc1cacba59504d8e97f1 258 Hamap MF_00134_A Indole-3-glycerol phosphate synthase [trpC]. 30 252 29.348 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 ABE28_018065 ac0a389591660107cbce5e0618c8cb10 214 Gene3D G3DSA:1.10.3720.10 1 212 1.1E-60 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018065 ac0a389591660107cbce5e0618c8cb10 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 7 105 5.1E-31 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_018065 ac0a389591660107cbce5e0618c8cb10 214 SUPERFAMILY SSF161098 9 208 6.28E-50 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018065 ac0a389591660107cbce5e0618c8cb10 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 211 8.6E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 Gene3D G3DSA:3.60.20.10 3 184 6.9E-49 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 Pfam PF00733 Asparagine synthase 233 570 2.5E-46 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 SUPERFAMILY SSF52402 233 570 3.09E-46 T 11-10-2018 ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 SUPERFAMILY SSF56235 1 216 4.2E-48 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 PIRSF PIRSF001589 1 588 8.2E-103 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 Pfam PF13537 Glutamine amidotransferase domain 46 162 1.2E-33 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_020470 c408b5537f06263c4c2980c72b9206c5 591 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 500 6.7E-85 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_007305 7a63e6eabf4ea7dfe9ae128d680a11a9 312 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 28 311 18.373 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ABE28_007305 7a63e6eabf4ea7dfe9ae128d680a11a9 312 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 88 110 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site ABE28_007305 7a63e6eabf4ea7dfe9ae128d680a11a9 312 Pfam PF01040 UbiA prenyltransferase family 46 295 2.5E-59 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ABE28_007305 7a63e6eabf4ea7dfe9ae128d680a11a9 312 Gene3D G3DSA:1.10.357.140 40 197 5.3E-18 T 11-10-2018 ABE28_007305 7a63e6eabf4ea7dfe9ae128d680a11a9 312 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 30 309 8.8E-96 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 ABE28_012835 ddb0b13ce1b87f87024ca533c83dbb39 88 Pfam PF12652 CotJB protein 11 87 8.1E-27 T 11-10-2018 IPR024207 Spore coat assembly protein CotJB, domain ABE28_012835 ddb0b13ce1b87f87024ca533c83dbb39 88 PIRSF PIRSF010606 1 88 1.1E-37 T 11-10-2018 IPR016571 Spore coat assembly protein CotJB ABE28_002955 d66742bfeef4df565f3b12f88302c117 218 Gene3D G3DSA:1.10.3720.10 1 218 5.9E-49 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002955 d66742bfeef4df565f3b12f88302c117 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 24 215 5.4E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002955 d66742bfeef4df565f3b12f88302c117 218 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 215 1.2E-68 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ABE28_002955 d66742bfeef4df565f3b12f88302c117 218 SUPERFAMILY SSF161098 4 215 4.71E-46 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 Gene3D G3DSA:3.40.1190.20 1 310 5.0E-103 T 11-10-2018 IPR029056 Ribokinase-like ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 PIRSF PIRSF000535 1 310 7.2E-113 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 307 5.4E-90 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 248 261 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 SUPERFAMILY SSF53613 1 286 8.42E-63 T 11-10-2018 IPR029056 Ribokinase-like ABE28_013590 3752667b2e12d3fded3487a0cd8f9ac0 311 Pfam PF00294 pfkB family carbohydrate kinase 7 287 6.4E-54 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_022545 a2feb607f3adb81351cd00d37d8a84b2 265 Pfam PF01061 ABC-2 type transporter 18 222 3.7E-25 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 SMART SM00345 10 68 1.7E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 SMART SM00895 78 203 1.1E-4 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 3.6E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 1.2E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 1.2E-5 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 Gene3D G3DSA:1.20.120.530 73 207 5.1E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 SUPERFAMILY SSF46785 4 72 7.86E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 SUPERFAMILY SSF48008 74 203 1.33E-17 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 Pfam PF07729 FCD domain 79 202 8.3E-14 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_008420 6c380d3541a8ad22bf3b844c9569e397 219 Gene3D G3DSA:1.10.10.10 3 70 3.4E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 570 1.4E-49 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 Gene3D G3DSA:3.90.1310.30 50 232 3.7E-14 T 11-10-2018 ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 215 3.8E-7 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 SUPERFAMILY SSF56519 49 230 6.15E-23 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 SUPERFAMILY SSF56601 186 575 1.3E-60 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_015695 a55a5b3430181add1527cd5b5b179f8b 579 Gene3D G3DSA:3.40.710.10 235 579 6.3E-69 T 11-10-2018 ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 SUPERFAMILY SSF53639 8 198 4.91E-45 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 SMART SM01007 9 196 1.3E-39 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 196 6.7E-37 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 TIGRFAM TIGR03328 salvage_mtnB: methylthioribulose-1-phosphate dehydratase 11 197 4.0E-60 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 Hamap MF_01677 Methylthioribulose-1-phosphate dehydratase [mtnB]. 1 205 93.907 T 11-10-2018 IPR017714 Methylthioribulose-1-phosphate dehydratase GO:0005737|GO:0019509|GO:0046872 KEGG: 00270+4.2.1.109|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 ABE28_013135 56031fd2d5dca8b762e871e1c4882ff4 209 Gene3D G3DSA:3.40.225.10 5 206 4.1E-47 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 Gene3D G3DSA:3.40.50.150 85 450 7.4E-125 T 11-10-2018 ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 386 417 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 SUPERFAMILY SSF53335 72 454 1.24E-89 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 Gene3D G3DSA:3.40.1350.30 132 287 7.4E-125 T 11-10-2018 ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 SUPERFAMILY SSF50249 3 64 6.85E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 448 3.9E-166 T 11-10-2018 ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 Gene3D G3DSA:2.40.50.140 1 82 8.4E-18 T 11-10-2018 ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 93 454 2.3E-22 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 438 448 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site ABE28_002035 ad75ffb21ff44a0222e7429ff00fd4c9 457 Pfam PF01938 TRAM domain 12 62 7.7E-13 T 11-10-2018 IPR002792 TRAM domain ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 4.1E-28 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 SUPERFAMILY SSF54534 84 157 1.31E-21 T 11-10-2018 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 2.5E-31 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 SUPERFAMILY SSF46557 5 79 3.4E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 Gene3D G3DSA:1.10.287.180 5 78 2.8E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 PIRSF PIRSF006092 1 158 7.7E-53 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 32.877 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 6.4E-60 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 ABE28_015700 76fe8b146067267d7f6b2be2dab702cd 158 Gene3D G3DSA:3.10.50.30 80 158 2.2E-27 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 20.194 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 1.8E-21 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 SUPERFAMILY SSF55129 3 59 6.15E-22 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 Gene3D G3DSA:3.30.1390.20 1 59 3.0E-28 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 3.5E-27 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000675 a2525817bce3767c2f6c82058a3f3b87 60 PIRSF PIRSF002211 1 60 4.0E-30 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_009315 e447ece2de8de75702c574c22ada5a32 70 Pfam PF03796 DnaB-like helicase C terminal domain 2 61 1.2E-6 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ABE28_009315 e447ece2de8de75702c574c22ada5a32 70 Gene3D G3DSA:3.40.50.300 1 70 1.6E-7 T 11-10-2018 ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 SUPERFAMILY SSF103473 1 421 6.67E-69 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 Gene3D G3DSA:1.20.1250.20 6 431 4.2E-66 T 11-10-2018 ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 Pfam PF07690 Major Facilitator Superfamily 246 420 7.2E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 Pfam PF00083 Sugar (and other) transporter 11 211 5.8E-22 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABE28_018715 619f578cc316148705ae50860ee3fdbd 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 289 306 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 SUPERFAMILY SSF103473 1 421 6.67E-69 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 Gene3D G3DSA:1.20.1250.20 6 431 4.2E-66 T 11-10-2018 ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 Pfam PF07690 Major Facilitator Superfamily 246 420 7.2E-13 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 Pfam PF00083 Sugar (and other) transporter 11 211 5.8E-22 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABE28_018755 619f578cc316148705ae50860ee3fdbd 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 289 306 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 SUPERFAMILY SSF47729 15 104 1.28E-34 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 PRINTS PR01727 Prokaryotic integration host factor signature 88 102 5.3E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 PRINTS PR01727 Prokaryotic integration host factor signature 54 69 5.3E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 PRINTS PR01727 Prokaryotic integration host factor signature 72 85 5.3E-22 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 Gene3D G3DSA:4.10.520.10 15 104 1.4E-39 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 SMART SM00411 15 104 3.4E-51 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 60 79 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 ABE28_014295 585a761bef7848ba53a9970148b8229f 104 Pfam PF00216 Bacterial DNA-binding protein 15 104 4.1E-37 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 ABE28_017890 0e3c39d9d95eb539912907721c651fb9 381 Gene3D G3DSA:3.30.300.210 230 375 4.5E-17 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_017890 0e3c39d9d95eb539912907721c651fb9 381 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 374 7.4E-64 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_017890 0e3c39d9d95eb539912907721c651fb9 381 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 215 373 2.2E-23 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_008890 cefbad00ad6d3a1f4a091e8b3593875a 108 SUPERFAMILY SSF101386 1 97 1.89E-23 T 11-10-2018 ABE28_008890 cefbad00ad6d3a1f4a091e8b3593875a 108 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 24 97 1.3E-15 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_008890 cefbad00ad6d3a1f4a091e8b3593875a 108 Gene3D G3DSA:1.10.287.1080 1 94 9.3E-19 T 11-10-2018 ABE28_008890 cefbad00ad6d3a1f4a091e8b3593875a 108 PIRSF PIRSF006639 1 107 3.1E-34 T 11-10-2018 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 ABE28_005175 6dcab577dcf4769c4cadc4ac94949390 309 Pfam PF01545 Cation efflux family 26 218 5.3E-47 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_005175 6dcab577dcf4769c4cadc4ac94949390 309 SUPERFAMILY SSF161111 19 219 4.97E-57 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_005175 6dcab577dcf4769c4cadc4ac94949390 309 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 298 8.5E-94 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_005175 6dcab577dcf4769c4cadc4ac94949390 309 SUPERFAMILY SSF160240 222 295 3.92E-9 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_005175 6dcab577dcf4769c4cadc4ac94949390 309 Gene3D G3DSA:1.20.1510.10 22 218 8.9E-45 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_007255 ff04349ba5318c7dec70131dd46032ff 102 Pfam PF14036 YlaH-like protein 18 93 1.0E-30 T 11-10-2018 IPR025620 YlaH-like protein ABE28_013335 0659850e9479947b42bbec82e914cf9f 196 SUPERFAMILY SSF52833 34 193 6.42E-44 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_013335 0659850e9479947b42bbec82e914cf9f 196 Gene3D G3DSA:3.40.30.10 24 194 1.8E-56 T 11-10-2018 ABE28_013335 0659850e9479947b42bbec82e914cf9f 196 Pfam PF02630 SCO1/SenC 5 176 2.3E-43 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002280 60fc30c174dacec549596dbe65096df9 370 SUPERFAMILY SSF53822 51 330 2.69E-47 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_002280 60fc30c174dacec549596dbe65096df9 370 Gene3D G3DSA:3.40.50.2300 156 327 1.8E-70 T 11-10-2018 ABE28_002280 60fc30c174dacec549596dbe65096df9 370 Pfam PF13407 Periplasmic binding protein domain 61 313 1.1E-27 T 11-10-2018 IPR025997 Periplasmic binding protein ABE28_002280 60fc30c174dacec549596dbe65096df9 370 Gene3D G3DSA:3.40.50.2300 54 321 1.8E-70 T 11-10-2018 ABE28_007450 6343005789b5b3aea5095cb047f72398 206 Pfam PF13921 Myb-like DNA-binding domain 9 62 5.9E-6 T 11-10-2018 ABE28_007450 6343005789b5b3aea5095cb047f72398 206 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 75 1.2E-43 T 11-10-2018 IPR014243 Transcription factor, RsfA ABE28_010030 760089ade8aa965ef26eee601263189d 119 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_010030 760089ade8aa965ef26eee601263189d 119 SMART SM00448 2 114 5.8E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_010030 760089ade8aa965ef26eee601263189d 119 Gene3D G3DSA:3.40.50.12740 2 119 5.0E-38 T 11-10-2018 ABE28_010030 760089ade8aa965ef26eee601263189d 119 SUPERFAMILY SSF52172 1 118 1.57E-38 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_000055 f0589a9b6dcf9880048882322a344aa3 158 Pfam PF14437 MafB19-like deaminase 2 142 3.0E-41 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ABE28_000055 f0589a9b6dcf9880048882322a344aa3 158 Gene3D G3DSA:3.40.140.10 1 158 1.2E-60 T 11-10-2018 ABE28_000055 f0589a9b6dcf9880048882322a344aa3 158 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 46 83 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_000055 f0589a9b6dcf9880048882322a344aa3 158 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 1 142 46.076 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 ABE28_000055 f0589a9b6dcf9880048882322a344aa3 158 SUPERFAMILY SSF53927 1 146 9.7E-53 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_020785 efc4e51efe206025d1931d833dda71ba 231 Pfam PF00072 Response regulator receiver domain 7 118 5.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_020785 efc4e51efe206025d1931d833dda71ba 231 PIRSF PIRSF006171 3 231 8.6E-79 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 ABE28_020785 efc4e51efe206025d1931d833dda71ba 231 SUPERFAMILY SSF52172 4 135 9.39E-37 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_020785 efc4e51efe206025d1931d833dda71ba 231 Gene3D G3DSA:3.40.50.2300 2 141 3.0E-35 T 11-10-2018 ABE28_020785 efc4e51efe206025d1931d833dda71ba 231 SMART SM00448 5 118 5.7E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 45 353 4.6E-150 T 11-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 Gene3D G3DSA:3.40.190.10 53 322 1.1E-133 T 11-10-2018 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 Gene3D G3DSA:3.40.190.10 141 352 1.1E-133 T 11-10-2018 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 SUPERFAMILY SSF53850 48 355 7.46E-89 T 11-10-2018 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 Pfam PF13531 Bacterial extracellular solute-binding protein 55 307 9.4E-44 T 11-10-2018 ABE28_006510 ca9a0550ab194261afc3ea03989a4dbf 357 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 172 180 - T 11-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 Gene3D G3DSA:3.40.630.10 3 454 2.7E-166 T 11-10-2018 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 SUPERFAMILY SSF53187 6 455 2.73E-63 T 11-10-2018 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 Gene3D G3DSA:3.30.70.360 173 370 2.7E-166 T 11-10-2018 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 SUPERFAMILY SSF55031 173 366 1.28E-50 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 Pfam PF01546 Peptidase family M20/M25/M40 73 452 1.0E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 142 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 3 451 3.4E-169 T 11-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 ABE28_017475 a8ca16dbabf8fb1def65a3f4f14069c6 456 Gene3D G3DSA:3.30.70.360 194 281 2.7E-166 T 11-10-2018 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 Gene3D G3DSA:3.80.30.20 174 373 8.4E-18 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 Pfam PF13311 Protein of unknown function (DUF4080) 371 563 5.9E-46 T 11-10-2018 IPR025288 Domain of unknown function DUF4080 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 SMART SM00729 176 379 2.3E-19 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 Gene3D G3DSA:3.40.50.280 10 135 1.8E-12 T 11-10-2018 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 SUPERFAMILY SSF102114 171 380 2.35E-36 T 11-10-2018 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 SUPERFAMILY SSF52242 42 131 1.02E-6 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 Pfam PF04055 Radical SAM superfamily 180 344 7.1E-13 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_006890 9da07222e23dde6681b0fb6eb8ceb7d0 585 Pfam PF02310 B12 binding domain 9 122 1.7E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 Gene3D G3DSA:1.25.40.20 3 104 1.8E-13 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 Gene3D G3DSA:1.25.40.960 105 169 1.8E-9 T 11-10-2018 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 38 67 6.2 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 104 133 9.6E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 73 101 570.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 SUPERFAMILY SSF48403 10 163 1.18E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 Pfam PF13606 Ankyrin repeat 43 67 2.4E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018740 1a5ec05bf4ad571c3804589feaa26cbe 169 Pfam PF12796 Ankyrin repeats (3 copies) 76 134 2.1E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 Gene3D G3DSA:1.25.40.20 3 104 1.8E-13 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 Gene3D G3DSA:1.25.40.960 105 169 1.8E-9 T 11-10-2018 ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 38 67 6.2 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 104 133 9.6E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 SMART SM00248 73 101 570.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 SUPERFAMILY SSF48403 10 163 1.18E-23 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 Pfam PF13606 Ankyrin repeat 43 67 2.4E-4 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_018780 1a5ec05bf4ad571c3804589feaa26cbe 169 Pfam PF12796 Ankyrin repeats (3 copies) 76 134 2.1E-10 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_000215 16c776b8ba53e3e92008d396775a9d8d 124 SUPERFAMILY SSF55298 2 123 8.33E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABE28_000215 16c776b8ba53e3e92008d396775a9d8d 124 Gene3D G3DSA:3.30.1330.40 1 124 2.3E-54 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABE28_000215 16c776b8ba53e3e92008d396775a9d8d 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 1.1E-53 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 ABE28_000215 16c776b8ba53e3e92008d396775a9d8d 124 Pfam PF01042 Endoribonuclease L-PSP 7 122 2.9E-44 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 ABE28_000215 16c776b8ba53e3e92008d396775a9d8d 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 99 117 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 ABE28_011035 1aaf9339ff65f8c5452030ccac8eb946 59 Pfam PF13131 Protein of unknown function (DUF3951) 8 38 9.5E-8 T 11-10-2018 IPR025028 Protein of unknown function DUF3951 ABE28_000590 236ab4d3a29f55ba4f7b36294e07b9c3 207 SUPERFAMILY SSF52166 1 206 5.1E-85 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000590 236ab4d3a29f55ba4f7b36294e07b9c3 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.069 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000590 236ab4d3a29f55ba4f7b36294e07b9c3 207 Gene3D G3DSA:3.40.1370.10 2 207 1.5E-83 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000590 236ab4d3a29f55ba4f7b36294e07b9c3 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 1.6E-73 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 ABE28_000590 236ab4d3a29f55ba4f7b36294e07b9c3 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 7.1E-83 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_013635 ca03a1ad19e2506c426267967af0b6b7 410 Pfam PF07690 Major Facilitator Superfamily 10 354 1.8E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_013635 ca03a1ad19e2506c426267967af0b6b7 410 Gene3D G3DSA:1.20.1250.20 205 389 3.9E-32 T 11-10-2018 ABE28_013635 ca03a1ad19e2506c426267967af0b6b7 410 SUPERFAMILY SSF103473 4 385 1.05E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_013635 ca03a1ad19e2506c426267967af0b6b7 410 Gene3D G3DSA:1.20.1250.20 2 184 4.2E-22 T 11-10-2018 ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 TIGRFAM TIGR01814 kynureninase: kynureninase 12 410 1.8E-120 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 Pfam PF00266 Aminotransferase class-V 78 375 1.1E-23 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 Gene3D G3DSA:3.90.1150.10 14 410 2.8E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 PIRSF PIRSF038800 3 418 5.3E-156 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 SUPERFAMILY SSF53383 7 412 8.77E-82 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 Gene3D G3DSA:3.40.640.10 45 314 2.8E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_018260 4ecf821f23d7c9aeaf9a8735bbf3279f 426 Hamap MF_01970 Kynureninase [kynU]. 3 410 39.705 T 11-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 ABE28_000495 f0af444737140465be93918507ba455f 169 Pfam PF05991 YacP-like NYN domain 4 166 1.3E-55 T 11-10-2018 IPR010298 Protein of unknown function DUF901 ABE28_005595 8ee5f363179fdb6b120210c0a2d34f84 453 Pfam PF14398 YheC/D like ATP-grasp 196 446 3.3E-67 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D ABE28_005595 8ee5f363179fdb6b120210c0a2d34f84 453 Gene3D G3DSA:3.30.470.20 314 446 1.9E-9 T 11-10-2018 ABE28_005595 8ee5f363179fdb6b120210c0a2d34f84 453 SUPERFAMILY SSF56059 223 431 4.95E-15 T 11-10-2018 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 Gene3D G3DSA:3.30.70.360 184 301 5.6E-85 T 11-10-2018 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 Gene3D G3DSA:3.40.630.10 20 330 5.6E-85 T 11-10-2018 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 19 419 2.3E-87 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 SUPERFAMILY SSF53187 6 437 5.18E-60 T 11-10-2018 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 SUPERFAMILY SSF55031 188 292 4.06E-18 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 Pfam PF01546 Peptidase family M20/M25/M40 101 234 3.2E-6 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_009455 5da7f47b16593dddb296ab806ade4158 468 PIRSF PIRSF037227 1 468 1.9E-215 T 11-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B ABE28_015890 ca63b38ac03cb674efb48b2a42e95ee0 391 Pfam PF01757 Acyltransferase family 7 357 1.4E-32 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 SUPERFAMILY SSF46689 3 70 7.98E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 Gene3D G3DSA:1.10.357.10 1 166 8.0E-29 T 11-10-2018 ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 54 3.1E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 50 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 5.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018400 c3c87d19bdc09f54eed37bb4b45da778 298 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 5.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 11-10-2018 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000700 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 375 2.6E-103 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 Gene3D G3DSA:3.40.630.10 11 372 2.3E-133 T 11-10-2018 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 Pfam PF07687 Peptidase dimerisation domain 179 275 6.0E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 Gene3D G3DSA:3.30.70.360 179 293 2.3E-133 T 11-10-2018 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 Pfam PF01546 Peptidase family M20/M25/M40 71 383 8.3E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 SUPERFAMILY SSF53187 2 386 1.11E-78 T 11-10-2018 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 PIRSF PIRSF005962 1 390 1.7E-114 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_017375 45d46f0ebb87494a9fa223e07630f957 390 SUPERFAMILY SSF55031 182 294 9.12E-29 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_002230 50efe981e0b2787d2eb28c6a872ed17d 286 SUPERFAMILY SSF161098 49 272 1.01E-54 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002230 50efe981e0b2787d2eb28c6a872ed17d 286 SUPERFAMILY SSF160964 4 45 1.44E-5 T 11-10-2018 ABE28_002230 50efe981e0b2787d2eb28c6a872ed17d 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 282 2.5E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002230 50efe981e0b2787d2eb28c6a872ed17d 286 Gene3D G3DSA:1.10.3720.10 45 284 4.5E-61 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012815 050d0db87367ba560f2bd446c9f01e51 68 Pfam PF14169 Cold-inducible protein YdjO 1 60 1.2E-20 T 11-10-2018 IPR025916 Cold-inducible protein YdjO ABE28_008155 2ceddf70ef38fe925a5c2d6de609b5c8 91 Pfam PF04296 Protein of unknown function (DUF448) 10 82 4.7E-27 T 11-10-2018 IPR007393 Domain of unknown function DUF448 ABE28_008155 2ceddf70ef38fe925a5c2d6de609b5c8 91 Gene3D G3DSA:3.30.1230.10 1 91 9.8E-35 T 11-10-2018 IPR035931 YlxR-like superfamily ABE28_008155 2ceddf70ef38fe925a5c2d6de609b5c8 91 SUPERFAMILY SSF64376 5 88 2.62E-28 T 11-10-2018 IPR035931 YlxR-like superfamily ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 Gene3D G3DSA:3.40.50.300 210 439 1.0E-52 T 11-10-2018 ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 SMART SM00487 21 218 6.6E-66 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 Pfam PF00270 DEAD/DEAH box helicase 27 191 1.9E-48 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 SUPERFAMILY SSF52540 70 353 2.61E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 SMART SM00490 254 335 2.8E-34 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 2 498 44.702 T 11-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 Gene3D G3DSA:3.40.50.300 1 207 3.2E-76 T 11-10-2018 ABE28_001355 17bc0b5600f4deb52711281de45c2ce8 499 Pfam PF00271 Helicase conserved C-terminal domain 227 335 1.2E-28 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_012250 973c821dc0c3debc055e3609c673388e 155 Gene3D G3DSA:3.40.140.10 2 155 2.5E-58 T 11-10-2018 ABE28_012250 973c821dc0c3debc055e3609c673388e 155 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 52 89 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_012250 973c821dc0c3debc055e3609c673388e 155 SUPERFAMILY SSF53927 2 133 1.84E-42 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_012250 973c821dc0c3debc055e3609c673388e 155 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 100 2.1E-25 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_004200 f8221b908e88c21c7e8beb9af37e2b9d 391 SUPERFAMILY SSF103473 9 390 1.06E-49 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_004200 f8221b908e88c21c7e8beb9af37e2b9d 391 Gene3D G3DSA:1.20.1250.20 3 390 8.2E-45 T 11-10-2018 ABE28_004200 f8221b908e88c21c7e8beb9af37e2b9d 391 Pfam PF07690 Major Facilitator Superfamily 20 259 1.6E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_008315 6766440cda84999aee9d8a6f0c0b0d66 302 Gene3D G3DSA:1.10.260.40 1 99 3.8E-31 T 11-10-2018 ABE28_008315 6766440cda84999aee9d8a6f0c0b0d66 302 SMART SM00530 7 63 1.5E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008315 6766440cda84999aee9d8a6f0c0b0d66 302 Pfam PF13464 Domain of unknown function (DUF4115) 222 283 1.2E-6 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 ABE28_008315 6766440cda84999aee9d8a6f0c0b0d66 302 Pfam PF13413 Helix-turn-helix domain 7 68 8.2E-22 T 11-10-2018 ABE28_008315 6766440cda84999aee9d8a6f0c0b0d66 302 SUPERFAMILY SSF47413 2 73 4.56E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 175 41.206 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 175 2.3E-83 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 SUPERFAMILY SSF56235 1 174 2.24E-59 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 Pfam PF00227 Proteasome subunit 2 173 3.7E-26 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 PIRSF PIRSF039093 1 175 9.4E-83 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 ABE28_007915 fd22d5866224fa48067db4b91737bfc1 175 Gene3D G3DSA:3.60.20.10 1 175 9.2E-68 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_024155 d03e91c3f94154215e6586308689e3c9 247 Pfam PF04909 Amidohydrolase 5 246 8.7E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_024155 d03e91c3f94154215e6586308689e3c9 247 Gene3D G3DSA:3.20.20.140 1 247 1.6E-40 T 11-10-2018 ABE28_024155 d03e91c3f94154215e6586308689e3c9 247 SUPERFAMILY SSF51556 2 245 7.49E-41 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_017025 e150d14aafa1a21841d45f038a3ff41d 111 Pfam PF14034 Sporulation protein YtrH 9 106 2.5E-39 T 11-10-2018 IPR025689 Sporulation protein YtrH ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 Pfam PF08281 Sigma-70, region 4 104 155 9.0E-15 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 Gene3D G3DSA:1.10.10.10 98 162 2.6E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 SUPERFAMILY SSF88946 11 92 9.02E-15 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 SUPERFAMILY SSF88659 102 159 1.4E-15 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 14 157 8.3E-23 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 Gene3D G3DSA:1.10.1740.10 3 81 1.4E-16 T 11-10-2018 ABE28_020500 8d13540df7eecd2244db6196d06d20ef 171 Pfam PF04542 Sigma-70 region 2 18 79 3.6E-9 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 253 3.8E-42 T 11-10-2018 ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 SUPERFAMILY SSF51735 3 254 2.39E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.2E-26 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019105 0a1f3dbf8060573a792f8b9e3bbc6662 258 Gene3D G3DSA:3.40.50.720 3 258 1.2E-59 T 11-10-2018 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 2 390 1.4E-166 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 Gene3D G3DSA:3.20.20.140 58 343 1.2E-146 T 11-10-2018 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 SUPERFAMILY SSF51338 1 390 1.96E-17 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 Pfam PF01979 Amidohydrolase family 53 376 1.4E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 Gene3D G3DSA:2.30.40.10 4 390 1.2E-146 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_005370 b8e6711d658488826508bacd7fb80796 391 SUPERFAMILY SSF51556 57 347 1.53E-71 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_005370 b8e6711d658488826508bacd7fb80796 391 PIRSF PIRSF001238 1 391 1.5E-159 T 11-10-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 ABE28_003215 9cc77ae57ca85aef763b85e15192ff4b 133 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 10 94 1.9E-4 T 11-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component ABE28_002360 78455de8f88616efaeb39a684c213a75 311 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002360 78455de8f88616efaeb39a684c213a75 311 Pfam PF00005 ABC transporter 19 160 4.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002360 78455de8f88616efaeb39a684c213a75 311 Gene3D G3DSA:3.40.50.300 1 231 1.9E-72 T 11-10-2018 ABE28_002360 78455de8f88616efaeb39a684c213a75 311 SUPERFAMILY SSF52540 2 225 1.74E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002360 78455de8f88616efaeb39a684c213a75 311 SMART SM00382 26 208 8.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016305 728f2f8fbf19f0f7672912c330674995 286 Gene3D G3DSA:3.30.420.10 120 277 1.4E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_016305 728f2f8fbf19f0f7672912c330674995 286 Pfam PF13276 HTH-like domain 42 94 1.2E-7 T 11-10-2018 IPR025948 HTH-like domain ABE28_016305 728f2f8fbf19f0f7672912c330674995 286 Pfam PF00665 Integrase core domain 124 238 1.3E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_016305 728f2f8fbf19f0f7672912c330674995 286 SUPERFAMILY SSF53098 119 278 3.79E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_013995 7614ec74a62c15e07df1169926c999ce 88 Pfam PF11122 Inner spore coat protein D 16 78 9.1E-14 T 11-10-2018 IPR020108 Spore coat protein CotD ABE28_013995 7614ec74a62c15e07df1169926c999ce 88 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 15 76 2.0E-5 T 11-10-2018 IPR020108 Spore coat protein CotD ABE28_001990 c1a210a648c905ec74c162caff89f093 486 ProSitePatterns PS00571 Amidases signature. 152 183 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ABE28_001990 c1a210a648c905ec74c162caff89f093 486 SUPERFAMILY SSF75304 1 484 1.44E-169 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_001990 c1a210a648c905ec74c162caff89f093 486 Gene3D G3DSA:3.90.1300.10 2 486 1.5E-201 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_001990 c1a210a648c905ec74c162caff89f093 486 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 478 96.923 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_001990 c1a210a648c905ec74c162caff89f093 486 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 478 1.4E-205 T 11-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_001990 c1a210a648c905ec74c162caff89f093 486 Pfam PF01425 Amidase 24 466 3.3E-163 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_018205 b489cf8cb0d86a79d50b7c4f538b2781 449 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_018205 b489cf8cb0d86a79d50b7c4f538b2781 449 Gene3D G3DSA:1.20.1740.10 7 449 7.3E-69 T 11-10-2018 ABE28_018205 b489cf8cb0d86a79d50b7c4f538b2781 449 Pfam PF00324 Amino acid permease 16 441 2.4E-95 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_018205 b489cf8cb0d86a79d50b7c4f538b2781 449 PIRSF PIRSF006060 1 448 1.2E-74 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_014445 73589a691a4e02d5b4dd38b972d2f70a 354 PIRSF PIRSF021350 3 354 4.3E-95 T 11-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 ABE28_014445 73589a691a4e02d5b4dd38b972d2f70a 354 Pfam PF14493 Helix-turn-helix domain 259 348 4.6E-22 T 11-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 ABE28_014445 73589a691a4e02d5b4dd38b972d2f70a 354 SUPERFAMILY SSF46894 246 294 3.74E-5 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_001795 bf2439a7d471d50334706ba8bec073d2 732 SMART SM00460 480 553 1.9E-21 T 11-10-2018 IPR002931 Transglutaminase-like ABE28_001795 bf2439a7d471d50334706ba8bec073d2 732 SUPERFAMILY SSF54001 412 558 7.71E-37 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_001795 bf2439a7d471d50334706ba8bec073d2 732 Gene3D G3DSA:3.10.620.30 386 561 3.7E-21 T 11-10-2018 ABE28_001795 bf2439a7d471d50334706ba8bec073d2 732 Pfam PF01841 Transglutaminase-like superfamily 431 551 8.6E-25 T 11-10-2018 IPR002931 Transglutaminase-like ABE28_001795 bf2439a7d471d50334706ba8bec073d2 732 Pfam PF13559 Domain of unknown function (DUF4129) 661 724 4.4E-6 T 11-10-2018 IPR025403 Domain of unknown function DUF4129 ABE28_006905 f9c36d92d17c6f211df53a51b47705d3 74 Gene3D G3DSA:1.20.58.990 1 54 1.9E-11 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_006905 f9c36d92d17c6f211df53a51b47705d3 74 SUPERFAMILY SSF140500 3 48 6.28E-12 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_006905 f9c36d92d17c6f211df53a51b47705d3 74 Pfam PF09388 Spo0E like sporulation regulatory protein 5 42 6.9E-11 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 ABE28_000795 40e7701d789b0fc98b014f7ba5664e77 250 Pfam PF01522 Polysaccharide deacetylase 51 172 1.8E-22 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_000795 40e7701d789b0fc98b014f7ba5664e77 250 Gene3D G3DSA:3.20.20.370 48 249 1.1E-55 T 11-10-2018 ABE28_000795 40e7701d789b0fc98b014f7ba5664e77 250 SUPERFAMILY SSF88713 15 239 1.36E-48 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_000795 40e7701d789b0fc98b014f7ba5664e77 250 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 52 239 1.2E-77 T 11-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 Pfam PF00687 Ribosomal protein L1p/L10e family 32 220 6.2E-57 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 SUPERFAMILY SSF56808 6 226 1.19E-84 T 11-10-2018 IPR023674 Ribosomal protein L1-like ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 44.826 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 Gene3D G3DSA:3.30.190.20 21 225 1.7E-85 T 11-10-2018 ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 PIRSF PIRSF002155 1 227 2.6E-82 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 6.8E-107 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 ABE28_000525 8ea4cd92f97fd9b1bb4f02bca4d105b5 231 Gene3D G3DSA:3.40.50.790 68 159 1.7E-85 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Gene3D G3DSA:3.40.50.980 22 178 2.5E-48 T 11-10-2018 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Gene3D G3DSA:3.30.300.310 431 534 2.8E-31 T 11-10-2018 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Gene3D G3DSA:2.30.38.10 354 429 2.4E-31 T 11-10-2018 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Pfam PF00501 AMP-binding enzyme 32 435 7.2E-83 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Gene3D G3DSA:3.40.50.980 180 353 7.8E-60 T 11-10-2018 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 SUPERFAMILY SSF56801 10 532 1.15E-133 T 11-10-2018 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 6 526 3.3E-244 T 11-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 ABE28_001160 c83661925d9854f25176233f48e8cda5 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 444 519 6.2E-14 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 SUPERFAMILY SSF54106 184 228 1.09E-9 T 11-10-2018 ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 Pfam PF01476 LysM domain 186 228 4.5E-12 T 11-10-2018 IPR018392 LysM domain ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 SUPERFAMILY SSF53187 1 178 6.59E-52 T 11-10-2018 ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 Gene3D G3DSA:3.40.630.40 1 174 4.1E-53 T 11-10-2018 ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 Gene3D G3DSA:3.10.350.10 181 229 2.5E-13 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 SMART SM00646 64 172 1.1E-39 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 1.2E-43 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_009905 04f2cc917a3fdeb4a99b7720ed4d4d7e 229 SMART SM00257 185 229 2.8E-10 T 11-10-2018 IPR018392 LysM domain ABE28_006735 9aa74c57188733c7d3fc9cacc084085f 241 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 10 237 5.9E-49 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABE28_006735 9aa74c57188733c7d3fc9cacc084085f 241 SUPERFAMILY SSF51695 5 240 1.98E-75 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_006735 9aa74c57188733c7d3fc9cacc084085f 241 Gene3D G3DSA:3.20.20.190 1 241 6.2E-84 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_017635 96cec968e14cd7c4f9a8744de3e0b227 331 SUPERFAMILY SSF53850 29 274 1.31E-37 T 11-10-2018 ABE28_017635 96cec968e14cd7c4f9a8744de3e0b227 331 Pfam PF13343 Bacterial extracellular solute-binding protein 111 290 1.2E-19 T 11-10-2018 ABE28_017635 96cec968e14cd7c4f9a8744de3e0b227 331 Gene3D G3DSA:3.40.190.10 130 248 5.6E-37 T 11-10-2018 ABE28_017635 96cec968e14cd7c4f9a8744de3e0b227 331 Gene3D G3DSA:3.40.190.10 36 289 5.6E-37 T 11-10-2018 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 Gene3D G3DSA:3.30.70.360 183 297 6.4E-144 T 11-10-2018 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 SUPERFAMILY SSF53187 5 390 3.43E-84 T 11-10-2018 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 Pfam PF07687 Peptidase dimerisation domain 187 279 1.1E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 PIRSF PIRSF005962 1 392 9.4E-132 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 376 3.4E-120 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 Pfam PF01546 Peptidase family M20/M25/M40 74 381 3.0E-28 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 SUPERFAMILY SSF55031 183 302 2.88E-31 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_005770 34566405a2bf3e41f3b19cb0c358dd7b 403 Gene3D G3DSA:3.40.630.10 16 373 6.4E-144 T 11-10-2018 ABE28_004670 33cf0ecec29cbb63f61601b52195f771 238 SUPERFAMILY SSF89550 1 203 4.12E-14 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_004670 33cf0ecec29cbb63f61601b52195f771 238 Gene3D G3DSA:3.20.20.140 1 238 2.5E-91 T 11-10-2018 ABE28_004670 33cf0ecec29cbb63f61601b52195f771 238 PIRSF PIRSF016557 1 238 9.0E-94 T 11-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 SUPERFAMILY SSF89623 1 144 9.55E-60 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 2.1E-55 T 11-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 7.7E-62 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 Pfam PF02502 Ribose/Galactose Isomerase 3 140 2.9E-57 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 PIRSF PIRSF005384 1 147 3.9E-60 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABE28_022895 233abe3cdb25378b8cd07df0f8391470 148 Gene3D G3DSA:3.40.1400.10 1 148 1.2E-60 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 ABE28_012830 9b1964b1d2c532a3de05afd490f4b830 77 Pfam PF11007 Spore coat associated protein JA (CotJA) 33 68 9.4E-9 T 11-10-2018 IPR020256 Spore coat protein CotJA ABE28_012830 9b1964b1d2c532a3de05afd490f4b830 77 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 10 73 3.0E-23 T 11-10-2018 IPR020256 Spore coat protein CotJA ABE28_002095 e185de4baf6e2e061d419700675989f4 189 SUPERFAMILY SSF55469 1 188 1.96E-39 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_002095 e185de4baf6e2e061d419700675989f4 189 Gene3D G3DSA:3.40.109.10 1 187 2.1E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_002095 e185de4baf6e2e061d419700675989f4 189 Pfam PF00881 Nitroreductase family 7 167 5.6E-30 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_002095 e185de4baf6e2e061d419700675989f4 189 PIRSF PIRSF000232 1 189 2.4E-52 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 SMART SM00382 446 628 7.6E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 SMART SM00843 703 768 3.7E-40 T 11-10-2018 IPR018541 FtsK gamma domain ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 Gene3D G3DSA:3.30.980.40 303 406 4.7E-37 T 11-10-2018 ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 Gene3D G3DSA:3.40.50.300 408 693 2.9E-111 T 11-10-2018 ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 SUPERFAMILY SSF46785 704 769 3.22E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 Pfam PF01580 FtsK/SpoIIIE family 411 607 7.0E-66 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 Pfam PF09397 Ftsk gamma domain 706 765 1.2E-29 T 11-10-2018 IPR018541 FtsK gamma domain ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 SUPERFAMILY SSF52540 384 677 3.89E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008255 564cd4af98e27f4fef7d196645212e33 776 Gene3D G3DSA:1.10.10.10 707 770 4.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 SUPERFAMILY SSF52467 200 367 7.31E-60 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 207 342 8.8E-44 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Gene3D G3DSA:3.40.50.970 368 570 7.8E-71 T 11-10-2018 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 436 455 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 19 181 5.9E-56 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 SUPERFAMILY SSF52518 377 568 2.02E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 399 547 9.8E-52 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 SUPERFAMILY SSF52518 16 182 5.0E-61 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 568 1.3E-256 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Gene3D G3DSA:3.40.50.970 9 191 3.0E-70 T 11-10-2018 ABE28_016545 8fd8ea400a66ef8cf48579302d487adc 571 Gene3D G3DSA:3.40.50.1220 202 366 1.3E-58 T 11-10-2018 ABE28_005905 2b3c3cd6725252f414b86960dbf6750f 424 SUPERFAMILY SSF103473 4 412 1.44E-63 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_005905 2b3c3cd6725252f414b86960dbf6750f 424 Gene3D G3DSA:1.20.1250.20 2 412 3.5E-50 T 11-10-2018 ABE28_005905 2b3c3cd6725252f414b86960dbf6750f 424 Pfam PF07690 Major Facilitator Superfamily 15 299 3.0E-35 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_021760 cb9aeccf7138de6bfae5ff9afa31fb66 286 Pfam PF13276 HTH-like domain 42 94 7.1E-10 T 11-10-2018 IPR025948 HTH-like domain ABE28_021760 cb9aeccf7138de6bfae5ff9afa31fb66 286 Gene3D G3DSA:3.30.420.10 120 277 1.4E-7 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_021760 cb9aeccf7138de6bfae5ff9afa31fb66 286 Pfam PF00665 Integrase core domain 124 238 1.3E-20 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_021760 cb9aeccf7138de6bfae5ff9afa31fb66 286 SUPERFAMILY SSF53098 119 278 3.79E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_004420 b355e1f4d4d39788bd1e7cb9619dff4b 470 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 49 417 3.5E-22 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABE28_004420 b355e1f4d4d39788bd1e7cb9619dff4b 470 Gene3D G3DSA:1.10.4160.10 4 456 1.5E-42 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ABE28_017730 cd67e9351e7f6083975ab1fc1f98d4c0 342 Gene3D G3DSA:3.20.20.70 1 340 1.0E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_017730 cd67e9351e7f6083975ab1fc1f98d4c0 342 SUPERFAMILY SSF51395 1 341 2.9E-108 T 11-10-2018 ABE28_017730 cd67e9351e7f6083975ab1fc1f98d4c0 342 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 6.3E-74 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 SUPERFAMILY SSF52172 1 180 1.34E-43 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 Gene3D G3DSA:3.40.50.2300 1 126 1.2E-39 T 11-10-2018 ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 SMART SM00862 148 219 4.0E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 Pfam PF00072 Response regulator receiver domain 6 114 5.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 Gene3D G3DSA:1.10.10.10 127 221 8.4E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 SMART SM00448 4 114 1.3E-42 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_009575 cd68add96e27a0a4ed16497d262d8b14 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 219 3.1E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_022295 fcf302d7c56d0524a3c29622c208944a 366 Pfam PF13349 Putative adhesin 164 333 1.4E-17 T 11-10-2018 IPR025164 Putative adhesin ABE28_022295 fcf302d7c56d0524a3c29622c208944a 366 PIRSF PIRSF012569 1 366 2.0E-92 T 11-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 ABE28_021695 11c2ef81ac1ba924bfe225c129091db3 365 Gene3D G3DSA:1.10.3210.10 5 299 7.5E-77 T 11-10-2018 ABE28_021695 11c2ef81ac1ba924bfe225c129091db3 365 SMART SM00471 131 267 5.2E-9 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_021695 11c2ef81ac1ba924bfe225c129091db3 365 Pfam PF01966 HD domain 136 257 3.9E-16 T 11-10-2018 IPR006674 HD domain ABE28_021695 11c2ef81ac1ba924bfe225c129091db3 365 SUPERFAMILY SSF109604 122 295 3.81E-37 T 11-10-2018 ABE28_013665 6a76a4b99bf0d48fef117039b166772c 298 Gene3D G3DSA:3.30.420.40 4 293 1.7E-63 T 11-10-2018 ABE28_013665 6a76a4b99bf0d48fef117039b166772c 298 SUPERFAMILY SSF53067 111 297 1.66E-41 T 11-10-2018 ABE28_013665 6a76a4b99bf0d48fef117039b166772c 298 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 262 1.1E-23 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 ABE28_013665 6a76a4b99bf0d48fef117039b166772c 298 SUPERFAMILY SSF53067 1 106 2.92E-17 T 11-10-2018 ABE28_013665 6a76a4b99bf0d48fef117039b166772c 298 Gene3D G3DSA:3.30.420.40 110 281 1.7E-63 T 11-10-2018 ABE28_019635 69a68d05cd80ac1457b2eacc754bc56c 296 Pfam PF00892 EamA-like transporter family 7 133 6.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019635 69a68d05cd80ac1457b2eacc754bc56c 296 Pfam PF00892 EamA-like transporter family 148 279 1.6E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019635 69a68d05cd80ac1457b2eacc754bc56c 296 SUPERFAMILY SSF103481 38 135 8.89E-13 T 11-10-2018 ABE28_019635 69a68d05cd80ac1457b2eacc754bc56c 296 SUPERFAMILY SSF103481 181 279 1.44E-9 T 11-10-2018 ABE28_014325 9044522c7e6efcd7d7eab41484d0c201 445 Gene3D G3DSA:1.20.1740.10 5 436 5.3E-74 T 11-10-2018 ABE28_014325 9044522c7e6efcd7d7eab41484d0c201 445 PIRSF PIRSF006060 1 435 5.5E-73 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_014325 9044522c7e6efcd7d7eab41484d0c201 445 Pfam PF00324 Amino acid permease 16 419 1.1E-40 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 Pfam PF00232 Glycosyl hydrolase family 1 6 482 9.7E-130 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 Gene3D G3DSA:3.20.20.80 3 484 2.8E-150 T 11-10-2018 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 PRINTS PR00131 Glycosyl hydrolase family 1 signature 380 388 5.8E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 PRINTS PR00131 Glycosyl hydrolase family 1 signature 422 439 5.8E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 PRINTS PR00131 Glycosyl hydrolase family 1 signature 447 459 5.8E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 PRINTS PR00131 Glycosyl hydrolase family 1 signature 315 329 5.8E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 PRINTS PR00131 Glycosyl hydrolase family 1 signature 401 412 5.8E-16 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_004385 871105e5194f80882ff07df287b2e19b 485 SUPERFAMILY SSF51445 6 482 9.61E-158 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_004385 871105e5194f80882ff07df287b2e19b 485 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 379 1.1E-44 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Gene3D G3DSA:1.10.540.10 1 120 1.0E-33 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Gene3D G3DSA:2.40.110.10 121 236 5.2E-47 T 11-10-2018 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 219 6.1E-28 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 118 2.2E-31 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 SUPERFAMILY SSF47203 229 379 2.26E-46 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 338 357 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 Gene3D G3DSA:1.20.140.10 237 380 1.1E-46 T 11-10-2018 ABE28_003570 fe3fcb8d271c265e792ba8bc677b552e 381 SUPERFAMILY SSF56645 4 243 8.12E-88 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 SMART SM00363 1 60 1.1E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 SUPERFAMILY SSF55120 47 234 1.42E-44 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 Gene3D G3DSA:3.30.70.1560 129 212 1.9E-56 T 11-10-2018 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 Gene3D G3DSA:3.30.70.580 62 230 1.9E-56 T 11-10-2018 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 Gene3D G3DSA:3.10.290.10 1 57 2.0E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 5.5E-47 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 Pfam PF01479 S4 domain 1 43 2.8E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 SUPERFAMILY SSF55174 1 59 9.22E-12 T 11-10-2018 ABE28_017675 8e01a760be52c3c7bdf7795579c8c717 239 Pfam PF00849 RNA pseudouridylate synthase 62 195 2.1E-20 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 Gene3D G3DSA:3.40.309.10 259 449 4.3E-179 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 SUPERFAMILY SSF53720 5 482 3.27E-166 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 TIGRFAM TIGR02299 HpaE: 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase 9 492 9.9E-237 T 11-10-2018 IPR011985 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase GO:0018480|GO:1901023 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 Gene3D G3DSA:3.40.605.10 13 476 4.3E-179 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_014095 ea190b25a892183f5a0a063ddf7150b6 504 Pfam PF00171 Aldehyde dehydrogenase family 18 478 2.2E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 5.7E-37 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 2.4E-27 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Gene3D G3DSA:1.10.540.10 1 120 5.0E-44 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 5.0E-51 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Gene3D G3DSA:2.40.110.10 121 234 4.4E-41 T 11-10-2018 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 SUPERFAMILY SSF47203 229 378 3.74E-59 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 Gene3D G3DSA:1.20.140.10 235 379 7.6E-57 T 11-10-2018 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 PIRSF PIRSF016578 4 362 6.9E-22 T 11-10-2018 ABE28_010975 545036f7e8ed223b4df9b9f8f7c04913 380 SUPERFAMILY SSF56645 1 243 4.97E-85 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 Pfam PF00361 Proton-conducting membrane transporter 139 437 3.0E-67 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 145 164 3.2E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 342 361 3.2E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 175 199 3.2E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 254 278 3.2E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 394 420 3.2E-41 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022775 17cbf12a7337a7658dc16351ba07fe77 507 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 6 501 3.8E-138 T 11-10-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_019235 f7b99d1764eae1c685fc569b39431acf 207 Gene3D G3DSA:2.60.120.10 60 165 5.1E-11 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_019235 f7b99d1764eae1c685fc569b39431acf 207 SUPERFAMILY SSF51182 63 154 3.22E-15 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 SUPERFAMILY SSF103473 3 512 3.01E-76 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 Pfam PF07690 Major Facilitator Superfamily 17 410 2.7E-55 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 Gene3D G3DSA:1.20.1250.20 260 512 4.4E-20 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 Gene3D G3DSA:1.20.1720.10 13 222 1.6E-49 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 7.1E-9 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 161 185 7.1E-9 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 7.1E-9 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 7.1E-9 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 392 411 7.1E-9 T 11-10-2018 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 501 2.3E-93 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_004775 b0b2e2890f6622026c2587a71040ac7c 521 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.1E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.1E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.1E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.1E-24 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 69.259 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 SUPERFAMILY SSF46785 5 78 4.47E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014915 a8e39fbbee6770682227106d254ef562 149 SUPERFAMILY SSF55252 80 149 2.35E-21 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 148 2.0E-51 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 8.0E-18 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 Gene3D G3DSA:3.30.1360.40 68 149 1.4E-31 T 11-10-2018 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 Pfam PF02863 Arginine repressor, C-terminal domain 82 144 1.5E-26 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 ABE28_014915 a8e39fbbee6770682227106d254ef562 149 Gene3D G3DSA:1.10.10.10 4 67 1.4E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014915 a8e39fbbee6770682227106d254ef562 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 3.2E-30 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 Gene3D G3DSA:3.40.50.1260 169 383 8.5E-168 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 SUPERFAMILY SSF53748 1 393 2.24E-163 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 Pfam PF00162 Phosphoglycerate kinase 6 383 9.9E-167 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 1.7E-97 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 PIRSF PIRSF000724 1 394 7.9E-159 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 Gene3D G3DSA:3.40.50.1260 8 391 8.5E-168 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 393 43.147 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022140 0e918cd6aeb322ae39f367d388d2802d 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 SUPERFAMILY SSF47413 1 60 1.17E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 Gene3D G3DSA:3.40.50.2300 62 299 3.6E-55 T 11-10-2018 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 271 1.2E-28 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 SMART SM00354 1 71 6.4E-31 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 SUPERFAMILY SSF53822 58 312 9.03E-53 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 Gene3D G3DSA:3.40.50.2300 158 285 3.6E-55 T 11-10-2018 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_021870 b5f182f9e089e67124472a6bbafab154 320 Gene3D G3DSA:1.10.260.40 1 59 8.8E-20 T 11-10-2018 ABE28_004680 abc169fb1e495b5ba2b04e4fdc07d47c 498 SUPERFAMILY SSF46785 85 184 1.78E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004680 abc169fb1e495b5ba2b04e4fdc07d47c 498 Gene3D G3DSA:1.10.10.10 4 142 8.9E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004680 abc169fb1e495b5ba2b04e4fdc07d47c 498 Pfam PF05043 Mga helix-turn-helix domain 72 154 2.5E-18 T 11-10-2018 IPR007737 Mga helix-turn-helix domain ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 SMART SM00829 10 319 3.9E-28 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 Pfam PF00107 Zinc-binding dehydrogenase 151 259 9.9E-28 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 SUPERFAMILY SSF50129 1 149 1.17E-35 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 Gene3D G3DSA:3.40.50.720 123 265 1.5E-96 T 11-10-2018 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 3.6E-11 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 Gene3D G3DSA:3.90.180.10 9 318 1.5E-96 T 11-10-2018 ABE28_019850 b29bfb706b5d51160a6d3c5fe4411ddb 321 SUPERFAMILY SSF51735 111 275 4.18E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 SUPERFAMILY SSF48498 78 187 3.45E-21 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.0E-6 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 Gene3D G3DSA:1.10.357.10 1 189 3.0E-54 T 11-10-2018 ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 4.9E-14 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004005 9465ff20618653d51032eaa6bd04b94e 190 SUPERFAMILY SSF46689 7 72 1.3E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 SMART SM00346 1 93 1.6E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 SUPERFAMILY SSF55781 70 244 1.24E-34 T 11-10-2018 ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 Pfam PF01614 Bacterial transcriptional regulator 121 238 1.0E-18 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 SUPERFAMILY SSF46785 1 77 1.71E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 Pfam PF09339 IclR helix-turn-helix domain 3 55 2.1E-9 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 Gene3D G3DSA:3.30.450.40 75 245 2.6E-36 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_013745 4878cd02df239c1f1568f1074bccf6d1 246 Gene3D G3DSA:1.10.10.10 1 74 5.7E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005155 4e0e593003351ba92c7eb643c4de9527 170 SUPERFAMILY SSF51161 4 166 4.57E-47 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_005155 4e0e593003351ba92c7eb643c4de9527 170 Gene3D G3DSA:2.160.10.10 1 170 3.3E-61 T 11-10-2018 ABE28_005155 4e0e593003351ba92c7eb643c4de9527 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 121 4.5E-8 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_005155 4e0e593003351ba92c7eb643c4de9527 170 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 16 44 5.7E-4 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_005155 4e0e593003351ba92c7eb643c4de9527 170 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 56 85 0.052 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_013705 ed3cf485340d4a87adb3e3abe2b19b51 532 Gene3D G3DSA:3.20.20.70 66 250 4.6E-7 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_013705 ed3cf485340d4a87adb3e3abe2b19b51 532 Pfam PF02638 Glycosyl hydrolase-like 10 44 372 6.8E-102 T 11-10-2018 IPR003790 Glycosyl hydrolase-like 10 ABE28_013705 ed3cf485340d4a87adb3e3abe2b19b51 532 SUPERFAMILY SSF51445 72 338 2.9E-20 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_013705 ed3cf485340d4a87adb3e3abe2b19b51 532 Gene3D G3DSA:2.60.40.10 434 532 3.5E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_000995 3646534027d3c4d939c18ca37a163136 421 PIRSF PIRSF006809 1 420 4.8E-148 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Gene3D G3DSA:3.40.50.300 196 364 3.4E-37 T 11-10-2018 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 7 360 2.4E-137 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 199 219 3.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 273 291 3.0E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Pfam PF13167 GTP-binding GTPase N-terminal 22 110 7.3E-33 T 11-10-2018 IPR025121 GTPase HflX, N-terminal ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Pfam PF16360 GTP-binding GTPase Middle Region 112 191 2.5E-27 T 11-10-2018 IPR032305 GTP-binding protein, middle domain ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Pfam PF01926 50S ribosome-binding GTPase 199 324 3.0E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Gene3D G3DSA:3.40.50.11060 15 136 1.6E-40 T 11-10-2018 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 Hamap MF_00900 GTPase HflX [hflX]. 25 390 46.839 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 ABE28_000995 3646534027d3c4d939c18ca37a163136 421 SUPERFAMILY SSF52540 197 369 9.01E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 SUPERFAMILY SSF56801 40 403 3.14E-56 T 11-10-2018 ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 Pfam PF00501 AMP-binding enzyme 89 333 1.5E-10 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 Gene3D G3DSA:3.30.300.30 326 437 7.8E-30 T 11-10-2018 ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 PIRSF PIRSF006444 1 437 1.1E-193 T 11-10-2018 IPR011880 Phenylacetate-CoA ligase GO:0010124|GO:0047475 KEGG: 00360+6.2.1.30|MetaCyc: PWY-1341|MetaCyc: PWY-6318|MetaCyc: PWY-7716 ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 Gene3D G3DSA:3.40.50.12780 2 325 5.1E-128 T 11-10-2018 ABE28_005090 b6c08552d7bc49dee975e4c9462bc5a3 442 Pfam PF14535 AMP-binding enzyme C-terminal domain 334 435 1.8E-25 T 11-10-2018 IPR028154 AMP-dependent ligase, C-terminal ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Pfam PF00271 Helicase conserved C-terminal domain 229 337 4.7E-31 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.5E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 SUPERFAMILY SSF52540 71 355 1.58E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 76.402 T 11-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Pfam PF03880 DbpA RNA binding domain 407 477 1.6E-19 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 SMART SM00487 23 220 6.2E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 SMART SM00490 256 337 6.3E-36 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Gene3D G3DSA:3.40.50.300 211 382 1.1E-54 T 11-10-2018 ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Gene3D G3DSA:3.40.50.300 4 209 1.7E-73 T 11-10-2018 ABE28_023620 c4a691443ce03ea9496896617b53ceb3 482 Gene3D G3DSA:3.30.70.330 406 481 3.4E-28 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 SUPERFAMILY SSF46626 256 355 1.89E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 158 236 1.3E-12 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 34 248 1.4E-49 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 178 232 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 Gene3D G3DSA:1.10.287.90 30 115 2.4E-26 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 Gene3D G3DSA:2.60.40.2600 130 360 5.8E-64 T 11-10-2018 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 SUPERFAMILY SSF81464 17 117 1.28E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 SUPERFAMILY SSF49503 131 284 9.29E-38 T 11-10-2018 IPR008972 Cupredoxin ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 Pfam PF00034 Cytochrome c 264 356 3.3E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 98 118 6.8E-7 T 11-10-2018 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 86 98 6.8E-7 T 11-10-2018 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 PRINTS PR01166 Cytochrome c oxidase subunit II signature 221 238 6.8E-7 T 11-10-2018 ABE28_007310 489c5bb86a8e15711c9a99849eaa0761 360 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 51 109 9.1E-11 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_012210 3b1f15a96b30c2544a7047ad42b6b00c 106 Gene3D G3DSA:3.30.160.250 3 101 5.2E-8 T 11-10-2018 ABE28_012415 47d2adaea830f6ce810c0978bb0122e2 204 SUPERFAMILY SSF53098 12 178 4.15E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_012415 47d2adaea830f6ce810c0978bb0122e2 204 Gene3D G3DSA:3.30.420.10 2 176 5.7E-25 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_012415 47d2adaea830f6ce810c0978bb0122e2 204 SMART SM00479 12 181 9.0E-10 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_012415 47d2adaea830f6ce810c0978bb0122e2 204 Pfam PF00929 Exonuclease 12 172 1.2E-11 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_007005 0d29e3568106d52ea88ce20fb034f459 380 Gene3D G3DSA:3.90.1150.10 30 375 2.5E-129 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_007005 0d29e3568106d52ea88ce20fb034f459 380 Pfam PF00155 Aminotransferase class I and II 31 375 4.3E-63 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_007005 0d29e3568106d52ea88ce20fb034f459 380 Gene3D G3DSA:3.40.640.10 58 278 2.5E-129 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_007005 0d29e3568106d52ea88ce20fb034f459 380 SUPERFAMILY SSF53383 5 379 8.51E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_007005 0d29e3568106d52ea88ce20fb034f459 380 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 ABE28_002495 b56bee3d6c2c1a71b2cdd205b3377aba 226 Gene3D G3DSA:1.10.150.240 19 92 1.5E-34 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_002495 b56bee3d6c2c1a71b2cdd205b3377aba 226 Gene3D G3DSA:3.40.50.1000 8 205 1.5E-34 T 11-10-2018 IPR023214 HAD superfamily ABE28_002495 b56bee3d6c2c1a71b2cdd205b3377aba 226 SUPERFAMILY SSF56784 7 219 3.15E-38 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_002495 b56bee3d6c2c1a71b2cdd205b3377aba 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 9 188 1.6E-19 T 11-10-2018 ABE28_011475 fffdb12fa87d7780ad8ca2a7179211ee 415 Pfam PF01926 50S ribosome-binding GTPase 50 177 4.8E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 ABE28_011475 fffdb12fa87d7780ad8ca2a7179211ee 415 SUPERFAMILY SSF52540 31 197 4.53E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011475 fffdb12fa87d7780ad8ca2a7179211ee 415 Pfam PF05128 Domain of unknown function (DUF697) 277 399 8.9E-6 T 11-10-2018 IPR021147 Protein of unknown function DUF697 ABE28_011475 fffdb12fa87d7780ad8ca2a7179211ee 415 Gene3D G3DSA:3.40.50.300 7 280 1.3E-26 T 11-10-2018 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 Gene3D G3DSA:2.30.140.30 273 363 1.0E-26 T 11-10-2018 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 295 358 5.7E-7 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 61 72 1.3E-15 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 SUPERFAMILY SSF56601 9 273 3.01E-70 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 25 255 1.1E-74 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 ABE28_014515 9abc3a010fb66902b43bc5c64be83eee 386 Gene3D G3DSA:3.40.710.10 33 272 6.6E-90 T 11-10-2018 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.4E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 270 289 1.4E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00410 Phenol hydroxylase reductase family signature 364 372 1.4E-8 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 SUPERFAMILY SSF52343 263 398 4.58E-36 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Hamap MF_01252 Flavohemoprotein [hmp]. 1 402 53.179 T 11-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 5.5E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 364 372 5.5E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 289 5.5E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 234 243 5.5E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Gene3D G3DSA:2.40.30.10 152 260 8.8E-36 T 11-10-2018 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Pfam PF00042 Globin 7 102 5.1E-11 T 11-10-2018 IPR000971 Globin GO:0020037 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 SUPERFAMILY SSF63380 151 260 2.69E-29 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 SUPERFAMILY SSF46458 1 144 1.2E-41 T 11-10-2018 IPR009050 Globin-like superfamily ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Gene3D G3DSA:3.40.50.80 261 401 3.9E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Gene3D G3DSA:1.10.490.10 1 145 1.2E-57 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Pfam PF00970 Oxidoreductase FAD-binding domain 158 259 1.6E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 ABE28_013865 40caab8bd1dae7f259964aac0579e6ea 402 Pfam PF00175 Oxidoreductase NAD-binding domain 271 377 1.8E-14 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 ABE28_020000 626f0e96e2385f2918ed56a85d4f5209 338 Gene3D G3DSA:3.90.1200.10 122 321 3.0E-22 T 11-10-2018 ABE28_020000 626f0e96e2385f2918ed56a85d4f5209 338 Pfam PF01636 Phosphotransferase enzyme family 32 263 1.3E-23 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_020000 626f0e96e2385f2918ed56a85d4f5209 338 SUPERFAMILY SSF56112 19 309 9.19E-47 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 131 195 1.4E-6 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 SUPERFAMILY SSF55347 126 259 4.91E-24 T 11-10-2018 ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 Gene3D G3DSA:3.40.50.720 3 306 4.7E-73 T 11-10-2018 ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 SUPERFAMILY SSF51735 2 163 5.05E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 Gene3D G3DSA:3.30.360.10 126 325 4.7E-73 T 11-10-2018 ABE28_003935 e66293f150e1b9e1c438ac61dd65669c 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 111 6.0E-18 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_021385 c423ef5ba05a59de7b23a224e6967f79 166 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 12 98 7.5E-13 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 ABE28_021385 c423ef5ba05a59de7b23a224e6967f79 166 Gene3D G3DSA:2.30.110.10 5 166 3.6E-45 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABE28_021385 c423ef5ba05a59de7b23a224e6967f79 166 SUPERFAMILY SSF50475 11 151 4.44E-26 T 11-10-2018 ABE28_021385 c423ef5ba05a59de7b23a224e6967f79 166 PIRSF PIRSF004633 2 166 2.9E-41 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain ABE28_017855 988947c9e58a44ba690cc4d05d103248 221 ProDom PD210561 YWRJ 1 221 5.0E-61 T 11-10-2018 IPR020173 Uncharacterised protein family YwrJ ABE28_003820 6b01a37d5d5de2afde4c01d1a77f6831 121 Gene3D G3DSA:1.20.1290.10 2 117 4.1E-29 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABE28_003820 6b01a37d5d5de2afde4c01d1a77f6831 121 SUPERFAMILY SSF69118 9 117 3.01E-28 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 ABE28_003820 6b01a37d5d5de2afde4c01d1a77f6831 121 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 109 3.2E-19 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_003820 6b01a37d5d5de2afde4c01d1a77f6831 121 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 45 95 9.0E-9 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 Gene3D G3DSA:3.40.50.12780 2 392 3.4E-117 T 11-10-2018 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 SUPERFAMILY SSF56801 6 487 4.19E-136 T 11-10-2018 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 ProSitePatterns PS00455 Putative AMP-binding domain signature. 153 164 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 Gene3D G3DSA:3.30.300.310 393 493 7.7E-31 T 11-10-2018 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 6 488 46.803 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 31 485 5.6E-136 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 Pfam PF00501 AMP-binding enzyme 12 395 2.6E-86 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_020795 c6d912efe63c1ff7f5eacdd8f73eaf19 493 Pfam PF13193 AMP-binding enzyme C-terminal domain 404 479 2.9E-19 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 8 193 6.3E-44 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 SUPERFAMILY SSF52540 3 198 1.8E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 Gene3D G3DSA:3.40.50.300 1 212 1.3E-66 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 TIGRFAM TIGR00235 udk: uridine kinase 1 207 3.0E-92 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 81 96 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 36 47 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 6 23 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 137 147 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 173 186 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 PRINTS PR00988 Uridine kinase signature 151 162 4.5E-36 T 11-10-2018 ABE28_015705 a160fcb0bab2504ce011bfc5d987070f 212 Hamap MF_00551 Uridine kinase [udk]. 3 207 42.105 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 508 42.87 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 SUPERFAMILY SSF110921 395 498 1.7E-22 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Pfam PF00682 HMGL-like 3 272 5.6E-92 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 496 3.3E-225 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 SMART SM00917 368 499 1.5E-35 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Gene3D G3DSA:3.20.20.70 1 275 1.6E-111 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Gene3D G3DSA:1.10.238.260 279 392 2.4E-39 T 11-10-2018 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 2.9E-36 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 SUPERFAMILY SSF51569 2 290 1.61E-93 T 11-10-2018 ABE28_016530 dd9841f1650fcff59a0bbf78a7b11a39 511 Gene3D G3DSA:3.30.160.270 393 499 1.1E-12 T 11-10-2018 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 Pfam PF00664 ABC transporter transmembrane region 15 280 5.9E-48 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 SMART SM00382 359 543 3.6E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 Gene3D G3DSA:3.40.50.300 325 574 2.4E-83 T 11-10-2018 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 Gene3D G3DSA:1.20.1560.10 1 313 1.5E-91 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 Pfam PF00005 ABC transporter 350 499 1.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 SUPERFAMILY SSF52540 329 568 1.13E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002380 c1b530ed2451a70bb59ef23df52fb3e1 582 SUPERFAMILY SSF90123 2 315 7.19E-78 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 Pfam PF03176 MMPL family 40 392 4.3E-59 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 Pfam PF03176 MMPL family 490 719 1.5E-46 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 SUPERFAMILY SSF82866 527 717 9.55E-28 T 11-10-2018 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 Gene3D G3DSA:1.20.1640.10 188 351 2.7E-9 T 11-10-2018 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 SUPERFAMILY SSF82866 163 349 4.05E-30 T 11-10-2018 ABE28_022320 d09119db47b2cb21a4a5db298503544e 731 Gene3D G3DSA:1.20.1640.10 537 717 8.3E-6 T 11-10-2018 ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 248 2.7E-64 T 11-10-2018 ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 SUPERFAMILY SSF51735 5 251 6.63E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.9E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008650 193d11afec0c9a0ea31a26d8f8eb8d5c 268 Gene3D G3DSA:3.40.50.720 1 261 9.1E-78 T 11-10-2018 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 PRINTS PR00116 Arginase signature 116 131 1.6E-11 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 PRINTS PR00116 Arginase signature 229 258 1.6E-11 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 PIRSF PIRSF036979 9 307 2.0E-90 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 Gene3D G3DSA:3.40.800.10 2 308 5.8E-98 T 11-10-2018 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 SUPERFAMILY SSF52768 12 307 5.58E-89 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 ProSitePatterns PS01053 Arginase family signature. 232 253 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 Pfam PF00491 Arginase family 30 300 2.2E-81 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_013790 ef448b19ae29ea7da0ee7d9ad2f40427 322 TIGRFAM TIGR01230 agmatinase: agmatinase 19 299 3.1E-61 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 ABE28_015910 a86a31bbf71c972278fa00d921190d0f 330 Gene3D G3DSA:3.90.25.10 174 301 1.0E-94 T 11-10-2018 ABE28_015910 a86a31bbf71c972278fa00d921190d0f 330 SUPERFAMILY SSF51735 1 307 2.04E-86 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_015910 a86a31bbf71c972278fa00d921190d0f 330 Gene3D G3DSA:3.40.50.720 4 236 1.0E-94 T 11-10-2018 ABE28_015910 a86a31bbf71c972278fa00d921190d0f 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 235 2.0E-58 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 PIRSF PIRSF037847 7 177 3.2E-63 T 11-10-2018 IPR026043 Transcription repressor NadR ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 SUPERFAMILY SSF46785 9 66 1.27E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 SUPERFAMILY SSF75500 76 176 1.11E-33 T 11-10-2018 IPR035922 3H domain superfamily ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 Pfam PF08279 HTH domain 12 65 6.6E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 Gene3D G3DSA:3.30.1340.20 73 177 1.1E-34 T 11-10-2018 IPR035922 3H domain superfamily ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 83 153 3.0E-24 T 11-10-2018 IPR004173 3H domain GO:0036094 ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 Gene3D G3DSA:1.10.10.10 1 67 1.3E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016290 41d3b5c496431c58d196cb2f4f07c6c1 177 Pfam PF02829 3H domain 79 175 6.1E-33 T 11-10-2018 IPR004173 3H domain GO:0036094 ABE28_007995 a9242ad968adf58623cc0f740a6cb1d6 71 Pfam PF06289 Flagellar protein (FlbD) 2 58 2.7E-21 T 11-10-2018 IPR009384 Swarming motility protein SwrD-like ABE28_018390 572c0712f0a968ef97c7a4076c232e6c 222 Gene3D G3DSA:2.40.33.20 2 221 6.9E-67 T 11-10-2018 ABE28_018390 572c0712f0a968ef97c7a4076c232e6c 222 Pfam PF03475 3-alpha domain 173 204 3.4E-5 T 11-10-2018 IPR005163 3-alpha domain ABE28_018390 572c0712f0a968ef97c7a4076c232e6c 222 SUPERFAMILY SSF50800 5 218 2.62E-62 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_018390 572c0712f0a968ef97c7a4076c232e6c 222 Pfam PF03473 MOSC domain 53 163 1.1E-18 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 SUPERFAMILY SSF63520 171 274 6.54E-28 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Pfam PF00874 PRD domain 182 273 1.0E-20 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Pfam PF00874 PRD domain 75 160 3.1E-21 T 11-10-2018 IPR011608 PRD domain GO:0006355 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Gene3D G3DSA:1.10.1790.10 64 166 9.1E-35 T 11-10-2018 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 SMART SM01061 1 59 1.9E-23 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Gene3D G3DSA:2.30.24.10 1 54 4.3E-20 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Gene3D G3DSA:1.10.1790.10 169 277 2.6E-38 T 11-10-2018 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 SUPERFAMILY SSF50151 1 53 3.79E-15 T 11-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 SUPERFAMILY SSF63520 58 166 3.27E-28 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 ABE28_004395 fd916c44c4500a7f2ade65fd07a5c516 280 Pfam PF03123 CAT RNA binding domain 1 52 1.2E-19 T 11-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 Gene3D G3DSA:3.30.70.360 211 321 1.2E-183 T 11-10-2018 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 Pfam PF07687 Peptidase dimerisation domain 209 308 3.5E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 140 179 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 SUPERFAMILY SSF53187 3 405 5.24E-81 T 11-10-2018 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 Gene3D G3DSA:3.40.630.10 5 401 1.2E-183 T 11-10-2018 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 Hamap MF_00550 Peptidase T [pepT]. 2 406 59.087 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 SUPERFAMILY SSF55031 211 321 9.83E-41 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 PIRSF PIRSF037215 1 410 1.2E-192 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 410 5.6E-203 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 ABE28_023610 9e63ad01ed583fd3848fae0d1fc934ba 411 Pfam PF01546 Peptidase family M20/M25/M40 141 402 3.5E-14 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_020275 d1232e35bef07b63747854e8331910a2 104 Pfam PF00085 Thioredoxin 6 101 1.3E-14 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_020275 d1232e35bef07b63747854e8331910a2 104 SUPERFAMILY SSF52833 3 103 1.04E-20 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_020275 d1232e35bef07b63747854e8331910a2 104 Gene3D G3DSA:3.40.30.10 1 103 7.8E-21 T 11-10-2018 ABE28_010000 b5c55241039eb86eaa5f5d403a180f38 374 SUPERFAMILY SSF51395 1 350 3.02E-98 T 11-10-2018 ABE28_010000 b5c55241039eb86eaa5f5d403a180f38 374 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 8 340 2.8E-86 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 ABE28_010000 b5c55241039eb86eaa5f5d403a180f38 374 Gene3D G3DSA:3.20.20.70 3 369 3.3E-113 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 Pfam PF00202 Aminotransferase class-III 78 452 1.4E-104 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 Gene3D G3DSA:3.40.640.10 106 356 1.9E-180 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 SUPERFAMILY SSF53383 79 452 1.58E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 PIRSF PIRSF000521 171 208 0.14 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 PIRSF PIRSF000521 217 455 3.0E-42 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 PIRSF PIRSF000521 11 174 8.1E-5 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 271 308 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_014315 0ae61a152a5dbd137ec3ff8a722e998d 457 Gene3D G3DSA:3.90.1150.10 41 451 1.9E-180 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_003890 cb8b2bc3057985457287e61657b21f3c 151 SMART SM00850 48 145 3.2E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_003890 cb8b2bc3057985457287e61657b21f3c 151 Pfam PF04397 LytTr DNA-binding domain 52 144 7.6E-20 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_003890 cb8b2bc3057985457287e61657b21f3c 151 Gene3D G3DSA:2.40.50.1020 34 150 8.1E-8 T 11-10-2018 ABE28_010880 55466216d38e36c888be0a3b7ed12fd9 369 Pfam PF03841 L-seryl-tRNA selenium transferase 58 278 6.7E-12 T 11-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 ABE28_010880 55466216d38e36c888be0a3b7ed12fd9 369 SUPERFAMILY SSF53383 10 345 3.48E-34 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_010880 55466216d38e36c888be0a3b7ed12fd9 369 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 6 364 4.5E-162 T 11-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 ABE28_010880 55466216d38e36c888be0a3b7ed12fd9 369 Gene3D G3DSA:3.40.640.10 24 278 2.6E-49 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_003045 d6af95d13af1c526fa621fec8368140b 187 Pfam PF14595 Thioredoxin 12 138 1.1E-38 T 11-10-2018 ABE28_003045 d6af95d13af1c526fa621fec8368140b 187 SUPERFAMILY SSF52833 40 134 4.23E-9 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_003045 d6af95d13af1c526fa621fec8368140b 187 Gene3D G3DSA:3.40.30.10 1 166 1.5E-18 T 11-10-2018 ABE28_006630 7352f346aeda75dd01822dd4f0c03148 70 SUPERFAMILY SSF140500 16 55 1.57E-11 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_006630 7352f346aeda75dd01822dd4f0c03148 70 Gene3D G3DSA:1.20.58.990 10 69 3.6E-15 T 11-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 ABE28_006630 7352f346aeda75dd01822dd4f0c03148 70 Pfam PF09388 Spo0E like sporulation regulatory protein 16 51 9.9E-12 T 11-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 ABE28_016510 a2743e57086700a19272ee6ec45d9dd7 344 SUPERFAMILY SSF48452 19 115 8.47E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_016510 a2743e57086700a19272ee6ec45d9dd7 344 SUPERFAMILY SSF116965 86 309 1.31E-7 T 11-10-2018 ABE28_016510 a2743e57086700a19272ee6ec45d9dd7 344 Gene3D G3DSA:1.25.40.10 9 166 2.0E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 Gene3D G3DSA:3.40.190.290 93 299 7.5E-58 T 11-10-2018 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.1E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 SUPERFAMILY SSF46785 1 86 3.15E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 SUPERFAMILY SSF53850 90 292 6.15E-42 T 11-10-2018 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 Gene3D G3DSA:1.10.10.10 1 92 1.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018605 7cfa61e4046359b70f7b31f31b88a09b 307 Pfam PF03466 LysR substrate binding domain 90 290 1.4E-48 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_001175 15530390e1e10fd17aadde824efe2ff9 73 Gene3D G3DSA:3.90.820.10 1 69 5.4E-29 T 11-10-2018 ABE28_001175 15530390e1e10fd17aadde824efe2ff9 73 SUPERFAMILY SSF160582 1 65 1.44E-27 T 11-10-2018 IPR038020 MbtH-like domain superfamily ABE28_001175 15530390e1e10fd17aadde824efe2ff9 73 Pfam PF03621 MbtH-like protein 1 52 5.1E-25 T 11-10-2018 IPR005153 MbtH-like domain ABE28_001175 15530390e1e10fd17aadde824efe2ff9 73 SMART SM00923 3 53 3.1E-25 T 11-10-2018 IPR005153 MbtH-like domain ABE28_001850 ceb1f3bbefa4b41b89c0a7527a91e79f 402 Gene3D G3DSA:1.20.1250.20 1 191 5.0E-23 T 11-10-2018 ABE28_001850 ceb1f3bbefa4b41b89c0a7527a91e79f 402 Pfam PF07690 Major Facilitator Superfamily 13 293 1.5E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001850 ceb1f3bbefa4b41b89c0a7527a91e79f 402 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_001850 ceb1f3bbefa4b41b89c0a7527a91e79f 402 Gene3D G3DSA:1.20.1250.20 197 395 1.6E-17 T 11-10-2018 ABE28_001850 ceb1f3bbefa4b41b89c0a7527a91e79f 402 SUPERFAMILY SSF103473 2 397 5.36E-47 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_002905 ca9c4b56df9885e4365f7b80ea90450a 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 33.908 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002905 ca9c4b56df9885e4365f7b80ea90450a 161 SUPERFAMILY SSF55040 11 157 3.14E-56 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002905 ca9c4b56df9885e4365f7b80ea90450a 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 1.6E-57 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002905 ca9c4b56df9885e4365f7b80ea90450a 161 Pfam PF01967 MoaC family 15 152 3.8E-53 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002905 ca9c4b56df9885e4365f7b80ea90450a 161 Gene3D G3DSA:3.30.70.640 1 161 2.0E-66 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_008340 2ef701e9bb775d912927d2b03bc09128 265 PIRSF PIRSF004789 1 264 3.0E-102 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABE28_008340 2ef701e9bb775d912927d2b03bc09128 265 Pfam PF13277 YmdB-like protein 4 255 7.6E-108 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABE28_008340 2ef701e9bb775d912927d2b03bc09128 265 SUPERFAMILY SSF56300 1 257 6.96E-85 T 11-10-2018 ABE28_008340 2ef701e9bb775d912927d2b03bc09128 265 Gene3D G3DSA:3.60.21.10 1 265 1.3E-112 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_008340 2ef701e9bb775d912927d2b03bc09128 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 264 3.4E-106 T 11-10-2018 IPR005235 Metallophosphoesterase, YmdB-like ABE28_023335 8d10249f7a51baf85e879e3359bbbc43 270 Pfam PF13649 Methyltransferase domain 79 167 1.6E-8 T 11-10-2018 ABE28_023335 8d10249f7a51baf85e879e3359bbbc43 270 SUPERFAMILY SSF53335 60 252 1.28E-21 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023335 8d10249f7a51baf85e879e3359bbbc43 270 Gene3D G3DSA:3.40.50.150 54 258 6.8E-23 T 11-10-2018 ABE28_023895 38175e1ac5bf36a198b47a8aff26276f 228 SUPERFAMILY SSF81342 24 141 1.02E-5 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABE28_023895 38175e1ac5bf36a198b47a8aff26276f 228 Pfam PF14358 Domain of unknown function (DUF4405) 73 130 4.5E-11 T 11-10-2018 IPR025517 Domain of unknown function DUF4405 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 PIRSF PIRSF002070 1 163 6.1E-41 T 11-10-2018 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 176 1.7E-49 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 Gene3D G3DSA:2.40.50.140 1 112 4.9E-46 T 11-10-2018 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.348 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 Pfam PF00436 Single-strand binding protein family 2 103 3.3E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ABE28_023725 3dae65f0c6015179a2658e41750326c5 176 SUPERFAMILY SSF50249 1 176 2.84E-59 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 Pfam PF00700 Bacterial flagellin C-terminal helical region 310 395 4.1E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 Gene3D G3DSA:3.30.70.2120 169 293 2.0E-78 T 11-10-2018 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 SUPERFAMILY SSF64518 1 396 2.48E-97 T 11-10-2018 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 Gene3D G3DSA:1.20.1330.10 42 345 2.0E-78 T 11-10-2018 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 PRINTS PR00207 Flagellin signature 74 93 3.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 PRINTS PR00207 Flagellin signature 35 52 3.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 PRINTS PR00207 Flagellin signature 109 132 3.0E-24 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 Gene3D G3DSA:1.10.8.410 346 396 4.1E-25 T 11-10-2018 ABE28_022430 cf79a6731d60a04adca8bc2d8e30caf0 396 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 140 1.8E-44 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABE28_003750 2befa918bd2ce13d3cd7d5c07bb27b8b 296 Gene3D G3DSA:3.60.130.10 1 296 1.5E-85 T 11-10-2018 ABE28_003750 2befa918bd2ce13d3cd7d5c07bb27b8b 296 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 13 276 2.4E-52 T 11-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 ABE28_003750 2befa918bd2ce13d3cd7d5c07bb27b8b 296 SUPERFAMILY SSF51197 9 286 3.8E-80 T 11-10-2018 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 Gene3D G3DSA:1.10.1660.10 2 126 2.2E-24 T 11-10-2018 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 SMART SM00422 2 70 1.2E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 Pfam PF13411 MerR HTH family regulatory protein 2 68 1.7E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 SUPERFAMILY SSF46955 2 109 1.83E-22 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 3.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 3.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_006490 e47eed5d934e12a27ff040d2896e3520 138 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 3.7E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_018150 4eeb8950b9c6e76c599721fe48dd6508 166 SUPERFAMILY SSF46785 3 142 4.96E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018150 4eeb8950b9c6e76c599721fe48dd6508 166 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_018150 4eeb8950b9c6e76c599721fe48dd6508 166 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 139 3.4E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_018150 4eeb8950b9c6e76c599721fe48dd6508 166 Pfam PF02082 Transcriptional regulator 2 83 7.9E-25 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_018150 4eeb8950b9c6e76c599721fe48dd6508 166 Gene3D G3DSA:1.10.10.10 1 155 1.9E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009355 a3df6949482d217dadf69196fac20e31 261 Pfam PF00665 Integrase core domain 98 212 4.0E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_009355 a3df6949482d217dadf69196fac20e31 261 Gene3D G3DSA:3.30.420.10 92 247 1.7E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_009355 a3df6949482d217dadf69196fac20e31 261 Pfam PF13276 HTH-like domain 22 74 6.7E-19 T 11-10-2018 IPR025948 HTH-like domain ABE28_009355 a3df6949482d217dadf69196fac20e31 261 SUPERFAMILY SSF53098 93 252 1.01E-33 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 SUPERFAMILY SSF51230 83 159 4.58E-23 T 11-10-2018 IPR011053 Single hybrid motif ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 106 120 1.0E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 121 134 1.0E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 89 102 1.0E-16 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 Pfam PF00364 Biotin-requiring enzyme 86 157 4.7E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 Gene3D G3DSA:2.40.50.100 82 159 2.2E-29 T 11-10-2018 ABE28_014965 b494757baa05c21f1941b1d295da7b08 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 160 1.8E-53 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 ABE28_011955 641bebf6b2384bc6fa7f70e97308c690 141 Gene3D G3DSA:3.10.180.10 9 141 2.2E-42 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011955 641bebf6b2384bc6fa7f70e97308c690 141 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 135 7.0E-10 T 11-10-2018 IPR028973 PhnB-like ABE28_011955 641bebf6b2384bc6fa7f70e97308c690 141 SUPERFAMILY SSF54593 1 137 3.81E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_016805 47d11b9fd4c66bdb9994c8691097b594 563 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 15 554 6.2E-184 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABE28_016805 47d11b9fd4c66bdb9994c8691097b594 563 Pfam PF02652 L-lactate permease 16 554 7.6E-201 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABE28_014660 5361a46e1e625ca839512d0a4acde624 392 Gene3D G3DSA:3.20.20.140 1 252 1.5E-17 T 11-10-2018 ABE28_014660 5361a46e1e625ca839512d0a4acde624 392 Pfam PF13263 PHP-associated 195 243 4.4E-5 T 11-10-2018 ABE28_014660 5361a46e1e625ca839512d0a4acde624 392 SUPERFAMILY SSF47781 311 367 5.34E-6 T 11-10-2018 IPR010994 RuvA domain 2-like ABE28_014660 5361a46e1e625ca839512d0a4acde624 392 SUPERFAMILY SSF89550 3 245 2.94E-16 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 ABE28_024210 77f94f8d381c5bc9b007399cae3b5f60 161 Gene3D G3DSA:1.20.120.450 1 159 1.7E-43 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024210 77f94f8d381c5bc9b007399cae3b5f60 161 SUPERFAMILY SSF109854 2 139 8.42E-29 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024210 77f94f8d381c5bc9b007399cae3b5f60 161 Pfam PF05163 DinB family 3 149 6.5E-27 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 Pfam PF13509 S1 domain 7 67 5.6E-20 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 Gene3D G3DSA:1.10.10.10 225 285 1.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 SMART SM00316 72 138 14.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 SMART SM00316 155 217 7.9 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 SMART SM00316 5 67 1.2 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 Gene3D G3DSA:2.40.50.140 157 223 2.7E-16 T 11-10-2018 ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 Gene3D G3DSA:2.40.50.140 76 152 7.9E-32 T 11-10-2018 ABE28_012845 fee433e02119470f4e44b67cee3ac5b1 290 PIRSF PIRSF012524 2 288 1.2E-108 T 11-10-2018 IPR014464 Conserved virulence factor B ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 Pfam PF03308 ArgK protein 65 335 2.6E-100 T 11-10-2018 ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 Gene3D G3DSA:3.40.50.300 94 304 4.2E-76 T 11-10-2018 ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 SUPERFAMILY SSF52540 48 368 1.23E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 TIGRFAM TIGR00750 lao: LAO/AO transport system ATPase 60 361 5.2E-97 T 11-10-2018 IPR005129 SIMIBI class G3E GTPase, ArgK/MeaB GO:0003924|GO:0005525 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 Gene3D G3DSA:1.10.287.130 306 370 4.2E-15 T 11-10-2018 ABE28_014840 2a9ec13ecec08f9e90d9a64569f6c9f3 373 Gene3D G3DSA:1.20.5.170 44 93 2.1E-14 T 11-10-2018 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 9 206 3.0E-36 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 SUPERFAMILY SSF63848 106 210 1.16E-28 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 207 7.2E-28 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 Gene3D G3DSA:2.160.20.70 101 225 7.4E-36 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 211 21.202 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 ABE28_016370 7aebc938b3dff415f3953c59d7920ea7 227 Gene3D G3DSA:3.30.160.540 7 87 4.4E-30 T 11-10-2018 ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 PRINTS PR01438 Universal stress protein signature 152 174 2.3E-15 T 11-10-2018 IPR006015 Universal stress protein A ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 PRINTS PR01438 Universal stress protein signature 134 146 2.3E-15 T 11-10-2018 IPR006015 Universal stress protein A ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 PRINTS PR01438 Universal stress protein signature 4 22 2.3E-15 T 11-10-2018 IPR006015 Universal stress protein A ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 Pfam PF00582 Universal stress protein family 4 47 1.9E-8 T 11-10-2018 IPR006016 UspA ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 Pfam PF00582 Universal stress protein family 94 173 3.7E-17 T 11-10-2018 IPR006016 UspA ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 Gene3D G3DSA:3.40.50.620 2 174 3.0E-30 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_005355 fcb3133951fef28e70d5daf3e19b38ed 174 SUPERFAMILY SSF52402 4 174 4.01E-26 T 11-10-2018 ABE28_021645 4e9b9450eda8d23ec9f0d2cb80713e3c 109 SUPERFAMILY SSF46689 4 98 3.4E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_002550 4e9b9450eda8d23ec9f0d2cb80713e3c 109 SUPERFAMILY SSF46689 4 98 3.4E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_007425 4e9b9450eda8d23ec9f0d2cb80713e3c 109 SUPERFAMILY SSF46689 4 98 3.4E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 Pfam PF01580 FtsK/SpoIIIE family 567 706 2.8E-49 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 Gene3D G3DSA:3.30.980.40 461 563 1.1E-34 T 11-10-2018 ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 SMART SM00382 602 780 1.7E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 Gene3D G3DSA:1.10.10.10 849 915 9.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 SUPERFAMILY SSF46785 855 921 4.84E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 SUPERFAMILY SSF52540 542 832 2.52E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 Pfam PF09397 Ftsk gamma domain 855 917 1.9E-27 T 11-10-2018 IPR018541 FtsK gamma domain ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 SMART SM00843 854 919 1.8E-36 T 11-10-2018 IPR018541 FtsK gamma domain ABE28_017370 054ba6b6f4f3181ecc85bd2c41d501ef 927 Gene3D G3DSA:3.40.50.300 564 844 8.8E-113 T 11-10-2018 ABE28_024110 978ac99ad5de50a8d6983d7d4c353bbb 410 Gene3D G3DSA:1.20.1250.20 19 399 1.2E-43 T 11-10-2018 ABE28_024110 978ac99ad5de50a8d6983d7d4c353bbb 410 SUPERFAMILY SSF103473 20 407 9.02E-53 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_024110 978ac99ad5de50a8d6983d7d4c353bbb 410 Pfam PF07690 Major Facilitator Superfamily 30 277 8.9E-25 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_010550 677797aba88963ae4b98595dff519291 375 Gene3D G3DSA:3.50.50.60 4 362 1.0E-125 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010550 677797aba88963ae4b98595dff519291 375 SUPERFAMILY SSF54373 217 317 1.65E-20 T 11-10-2018 ABE28_010550 677797aba88963ae4b98595dff519291 375 Pfam PF01266 FAD dependent oxidoreductase 4 356 8.0E-49 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_010550 677797aba88963ae4b98595dff519291 375 SUPERFAMILY SSF51905 2 374 6.04E-49 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_010550 677797aba88963ae4b98595dff519291 375 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 255 271 7.7E-5 T 11-10-2018 ABE28_010550 677797aba88963ae4b98595dff519291 375 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 7.7E-5 T 11-10-2018 ABE28_010550 677797aba88963ae4b98595dff519291 375 Gene3D G3DSA:3.30.9.10 59 317 1.0E-125 T 11-10-2018 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 68 16.746 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 Pfam PF02416 mttA/Hcf106 family 5 54 6.5E-19 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 50 7.9E-17 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 1.7E-9 T 11-10-2018 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 1.7E-9 T 11-10-2018 ABE28_011225 cf2404b17edac20e2d5e63f98231295b 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 41 59 1.7E-9 T 11-10-2018 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 SUPERFAMILY SSF101904 500 817 1.16E-111 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 SMART SM00434 12 465 6.7E-296 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Gene3D G3DSA:2.120.10.90 497 809 5.3E-127 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 SUPERFAMILY SSF56719 31 487 2.62E-182 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Gene3D G3DSA:3.30.1360.40 237 333 3.4E-219 T 11-10-2018 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 811 25.101 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 807 0.0 T 11-10-2018 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Gene3D G3DSA:1.10.268.10 370 459 3.4E-219 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 6.0E-160 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 2.1E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 761 806 2.1E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 604 9.1E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 656 6.5E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 545 3.6E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 709 756 3.4E-14 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 ABE28_023835 28ae4f7c4495e8fe9753bee3a2318d1a 848 Gene3D G3DSA:3.90.199.10 33 486 3.4E-219 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 SUPERFAMILY SSF54849 136 204 6.41E-27 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 SUPERFAMILY SSF48592 5 518 4.12E-79 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 Gene3D G3DSA:3.50.7.10 190 370 1.0E-234 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 Gene3D G3DSA:1.10.560.10 7 518 1.0E-234 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 Gene3D G3DSA:3.30.260.10 135 408 1.0E-234 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 1.1E-102 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 PRINTS PR00298 60kDa chaperonin signature 82 109 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 PRINTS PR00298 60kDa chaperonin signature 396 417 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 PRINTS PR00298 60kDa chaperonin signature 26 52 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 PRINTS PR00298 60kDa chaperonin signature 348 373 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 PRINTS PR00298 60kDa chaperonin signature 266 289 4.5E-73 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 SUPERFAMILY SSF52029 183 374 9.87E-85 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 544 42.512 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_001575 3051aecbadefca0d4bfb9cca7ba7586e 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 523 1.1E-257 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 149 177 2.7E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 98 124 2.7E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 2.7E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 80 98 2.7E-37 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 ProSitePatterns PS01218 TatC family signature. 149 168 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 6 235 15.558 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 11 221 1.3E-56 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_010375 97ba26ed4aff67ceb65c7ce6a346a5bb 246 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 216 1.8E-57 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 Hamap MF_01494 DEAD-box ATP-dependent RNA helicase CshB [cshB]. 4 437 48.94 T 11-10-2018 IPR030881 DEAD-box ATP-dependent RNA helicase CshB GO:0004386|GO:0009409 ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 SUPERFAMILY SSF52540 72 361 5.94E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 SMART SM00490 260 341 2.5E-29 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 Gene3D G3DSA:3.40.50.300 2 219 2.6E-67 T 11-10-2018 ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 Gene3D G3DSA:3.40.50.300 220 437 2.6E-43 T 11-10-2018 ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 Pfam PF00271 Helicase conserved C-terminal domain 242 341 6.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 Pfam PF00270 DEAD/DEAH box helicase 28 196 3.2E-40 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 ABE28_015325 46b48b1d20b346d575721080c68e32a3 437 SMART SM00487 23 224 2.1E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain ABE28_020960 8a160e89ce642cdab0a3b15f33d8ebd2 301 SUPERFAMILY SSF103481 39 143 4.18E-16 T 11-10-2018 ABE28_020960 8a160e89ce642cdab0a3b15f33d8ebd2 301 Pfam PF00892 EamA-like transporter family 12 139 5.0E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_020960 8a160e89ce642cdab0a3b15f33d8ebd2 301 Pfam PF00892 EamA-like transporter family 151 285 1.2E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_020960 8a160e89ce642cdab0a3b15f33d8ebd2 301 SUPERFAMILY SSF103481 188 289 9.42E-15 T 11-10-2018 ABE28_000245 a81af5d9316494735659a7d5149183ce 390 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 9.1E-184 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABE28_000245 a81af5d9316494735659a7d5149183ce 390 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 377 77.33 T 11-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 ABE28_000245 a81af5d9316494735659a7d5149183ce 390 SUPERFAMILY SSF51679 1 347 1.83E-96 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_000245 a81af5d9316494735659a7d5149183ce 390 Gene3D G3DSA:3.20.20.30 1 360 4.9E-145 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_000245 a81af5d9316494735659a7d5149183ce 390 Pfam PF00296 Luciferase-like monooxygenase 1 323 1.4E-90 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 SUPERFAMILY SSF53383 2 427 8.7E-125 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_003705 838ed009946dd9eb4911157af58740fd 435 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 5 427 8.7E-169 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 93.271 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 Pfam PF00202 Aminotransferase class-III 36 398 1.6E-69 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 Gene3D G3DSA:3.40.640.10 72 320 2.1E-166 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 Gene3D G3DSA:3.90.1150.10 9 423 2.1E-166 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_003705 838ed009946dd9eb4911157af58740fd 435 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 Pfam PF00563 EAL domain 11 232 4.7E-27 T 11-10-2018 IPR001633 EAL domain ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 SMART SM00052 1 237 4.2E-11 T 11-10-2018 IPR001633 EAL domain ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 Gene3D G3DSA:3.20.20.450 1 225 6.8E-51 T 11-10-2018 IPR035919 EAL domain superfamily ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 Pfam PF10388 EAL-domain associated signalling protein domain 236 401 1.0E-68 T 11-10-2018 IPR018842 YkuI, C-terminal ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 SUPERFAMILY SSF103190 259 397 2.82E-43 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 Gene3D G3DSA:3.30.450.20 286 401 9.9E-48 T 11-10-2018 ABE28_007050 b9c81ee325f4a51ea4b32a33cafd6363 401 SUPERFAMILY SSF141868 11 242 5.1E-36 T 11-10-2018 IPR035919 EAL domain superfamily ABE28_019855 dd0c85233c4714dc953d961c559051fd 350 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 342 9.9E-49 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_019855 dd0c85233c4714dc953d961c559051fd 350 Gene3D G3DSA:3.30.300.210 211 347 7.3E-10 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_019855 dd0c85233c4714dc953d961c559051fd 350 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 342 3.3E-17 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 Gene3D G3DSA:3.50.50.100 1 392 6.3E-113 T 11-10-2018 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 2.1E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.7E-10 T 11-10-2018 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.7E-10 T 11-10-2018 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.7E-10 T 11-10-2018 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 3.7E-10 T 11-10-2018 ABE28_019895 84997b5fbe6f210cae6978783376804c 393 SUPERFAMILY SSF51905 2 326 1.04E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008695 84997b5fbe6f210cae6978783376804c 393 Gene3D G3DSA:3.50.50.100 1 392 6.3E-113 T 11-10-2018 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 319 2.1E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 3.7E-10 T 11-10-2018 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 3.7E-10 T 11-10-2018 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.7E-10 T 11-10-2018 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 3.7E-10 T 11-10-2018 ABE28_008695 84997b5fbe6f210cae6978783376804c 393 SUPERFAMILY SSF51905 2 326 1.04E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_018815 ee3ad226eee4a955d90f074f1295f18f 355 Pfam PF01032 FecCD transport family 22 348 2.4E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_018815 ee3ad226eee4a955d90f074f1295f18f 355 SUPERFAMILY SSF81345 10 348 3.79E-79 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_018815 ee3ad226eee4a955d90f074f1295f18f 355 Gene3D G3DSA:1.10.3470.10 9 354 4.7E-100 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_014130 cfee6434fed189118e49686869efeb02 127 SUPERFAMILY SSF50692 1 121 1.99E-49 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_014130 cfee6434fed189118e49686869efeb02 127 PIRSF PIRSF006246 1 126 7.8E-54 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABE28_014130 cfee6434fed189118e49686869efeb02 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 71.752 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABE28_014130 cfee6434fed189118e49686869efeb02 127 Pfam PF02261 Aspartate decarboxylase 1 114 3.1E-52 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABE28_014130 cfee6434fed189118e49686869efeb02 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 97 1.0E-37 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABE28_014130 cfee6434fed189118e49686869efeb02 127 Gene3D G3DSA:2.40.40.20 1 125 1.4E-53 T 11-10-2018 ABE28_014130 cfee6434fed189118e49686869efeb02 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.2E-57 T 11-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 ABE28_012980 c6e48fe2a021717df827e8ab9dcfa4f6 256 Gene3D G3DSA:3.40.830.10 1 256 6.1E-77 T 11-10-2018 ABE28_012980 c6e48fe2a021717df827e8ab9dcfa4f6 256 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 4 250 1.0E-35 T 11-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 ABE28_012980 c6e48fe2a021717df827e8ab9dcfa4f6 256 PIRSF PIRSF006157 1 256 1.0E-83 T 11-10-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 ABE28_012980 c6e48fe2a021717df827e8ab9dcfa4f6 256 SUPERFAMILY SSF53213 1 256 5.36E-80 T 11-10-2018 ABE28_000505 00816fa3e8c020f6dd98d9f6ac20c0cc 49 Pfam PF00471 Ribosomal protein L33 3 49 9.1E-19 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000505 00816fa3e8c020f6dd98d9f6ac20c0cc 49 SUPERFAMILY SSF57829 2 49 7.32E-15 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABE28_000505 00816fa3e8c020f6dd98d9f6ac20c0cc 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 4 49 2.6E-16 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000505 00816fa3e8c020f6dd98d9f6ac20c0cc 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 16.482 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000505 00816fa3e8c020f6dd98d9f6ac20c0cc 49 Gene3D G3DSA:2.20.28.120 1 49 5.4E-18 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_004155 b2cfedd94eefa03a9491948a14d558b0 222 Pfam PF00857 Isochorismatase family 6 170 1.6E-35 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABE28_004155 b2cfedd94eefa03a9491948a14d558b0 222 Gene3D G3DSA:3.40.50.850 2 210 9.4E-46 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_004155 b2cfedd94eefa03a9491948a14d558b0 222 SUPERFAMILY SSF52499 3 189 1.57E-44 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_019415 6dbac4a5b6ce7bf4690a361a416ea966 415 Pfam PF07969 Amidohydrolase family 174 383 4.4E-15 T 11-10-2018 IPR013108 Amidohydrolase 3 ABE28_019415 6dbac4a5b6ce7bf4690a361a416ea966 415 Gene3D G3DSA:2.30.40.10 28 401 8.0E-99 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019415 6dbac4a5b6ce7bf4690a361a416ea966 415 Gene3D G3DSA:3.20.20.140 68 362 8.0E-99 T 11-10-2018 ABE28_019415 6dbac4a5b6ce7bf4690a361a416ea966 415 SUPERFAMILY SSF51556 67 372 3.0E-69 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 Pfam PF01467 Cytidylyltransferase-like 6 134 1.1E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 Gene3D G3DSA:3.40.50.620 1 163 2.0E-58 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 63 3.5E-16 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.714 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.7E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.7E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.7E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.7E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.7E-51 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 3 67 6.0E-5 T 11-10-2018 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 SUPERFAMILY SSF52374 3 157 4.79E-44 T 11-10-2018 ABE28_007400 0cbc4da4dd792f628c3cef7d9aeaec3c 163 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.4E-61 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 ABE28_004710 8a52edc5923ac62592cb0895e009ad60 284 Pfam PF06800 Sugar transport protein 5 281 1.4E-109 T 11-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 ABE28_004710 8a52edc5923ac62592cb0895e009ad60 284 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 283 1.5E-112 T 11-10-2018 ABE28_004710 8a52edc5923ac62592cb0895e009ad60 284 SUPERFAMILY SSF103481 37 138 4.84E-8 T 11-10-2018 ABE28_004710 8a52edc5923ac62592cb0895e009ad60 284 SUPERFAMILY SSF103481 193 272 3.92E-7 T 11-10-2018 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 SMART SM00448 2 112 4.4E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 SMART SM00862 145 222 1.3E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 Gene3D G3DSA:3.40.50.2300 2 124 3.8E-36 T 11-10-2018 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 SUPERFAMILY SSF52172 2 174 6.12E-40 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 Pfam PF00072 Response regulator receiver domain 5 113 7.4E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 221 9.3E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_004930 0927d2aa3defab21b709cbbd1cd9c57c 225 Gene3D G3DSA:1.10.10.10 125 224 1.1E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 Gene3D G3DSA:2.60.120.200 13 155 5.7E-13 T 11-10-2018 ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 SUPERFAMILY SSF56300 163 417 2.28E-23 T 11-10-2018 ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 Gene3D G3DSA:3.60.21.10 164 408 7.7E-10 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 SUPERFAMILY SSF49899 23 137 1.27E-11 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 Pfam PF00149 Calcineurin-like phosphoesterase 166 321 1.9E-8 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_009655 d9ee7247f6c59abab55f570a60af26be 453 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 32 137 6.4E-12 T 11-10-2018 ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 Pfam PF05193 Peptidase M16 inactive domain 166 338 3.1E-38 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 Gene3D G3DSA:3.30.830.10 209 405 1.1E-53 T 11-10-2018 ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 5.5E-49 T 11-10-2018 IPR011765 Peptidase M16, N-terminal ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 SUPERFAMILY SSF63411 226 401 5.58E-43 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 SUPERFAMILY SSF63411 3 204 3.67E-63 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008205 ae02d9628b9b797e872fdf31989296cf 408 Gene3D G3DSA:3.30.830.10 1 208 5.7E-81 T 11-10-2018 ABE28_015625 1071ec5675af664de4f34d6743efcbd7 46 Gene3D G3DSA:1.10.287.1100 4 37 4.9E-19 T 11-10-2018 IPR036916 Sporulation inhibitor A superfamily ABE28_015625 1071ec5675af664de4f34d6743efcbd7 46 Pfam PF08970 Sporulation inhibitor A 1 43 2.2E-21 T 11-10-2018 IPR015064 Sporulation inhibitor A ABE28_015625 1071ec5675af664de4f34d6743efcbd7 46 SUPERFAMILY SSF100985 1 43 1.44E-14 T 11-10-2018 IPR036916 Sporulation inhibitor A superfamily ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Pfam PF01645 Conserved region in glutamate synthase 798 1166 1.0E-159 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Gene3D G3DSA:3.60.20.10 22 551 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 SUPERFAMILY SSF56235 22 441 3.93E-152 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 SUPERFAMILY SSF69336 1213 1476 9.42E-92 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Pfam PF00310 Glutamine amidotransferases class-II 22 438 1.4E-184 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Gene3D G3DSA:3.20.20.70 489 1182 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Gene3D G3DSA:3.20.20.70 443 797 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Gene3D G3DSA:2.160.20.60 1215 1487 8.9E-109 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 SUPERFAMILY SSF51395 459 1203 6.51E-259 T 11-10-2018 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Pfam PF04898 Glutamate synthase central domain 463 739 9.9E-114 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 ABE28_020575 87af03f1149a1ffc6bf22353d27de706 1513 Pfam PF01493 GXGXG motif 1244 1431 1.4E-81 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 212 227 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 Pfam PF02954 Bacterial regulatory protein, Fis family 394 431 1.7E-4 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 Pfam PF00158 Sigma-54 interaction domain 127 293 1.9E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 338 347 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 SUPERFAMILY SSF52540 126 369 4.92E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 Gene3D G3DSA:3.40.50.300 114 297 3.9E-63 T 11-10-2018 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 SMART SM00382 145 293 3.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 Gene3D G3DSA:1.10.8.60 298 371 4.9E-21 T 11-10-2018 ABE28_004410 82b4a207d3b3ce47ad4146455e593c12 609 SUPERFAMILY SSF46689 338 431 8.06E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 SMART SM00382 26 215 7.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 Gene3D G3DSA:3.40.50.300 1 256 7.1E-72 T 11-10-2018 ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 Pfam PF00005 ABC transporter 17 167 6.4E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 Pfam PF01955 Adenosylcobinamide amidohydrolase 286 475 2.0E-52 T 11-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023260 23b52ffd82c46cf4635b38db561b1397 490 SUPERFAMILY SSF52540 1 235 3.48E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_022450 356f5d251ade82425e018c166180d4cf 292 SUPERFAMILY SSF64518 1 292 2.62E-66 T 11-10-2018 ABE28_022450 356f5d251ade82425e018c166180d4cf 292 Pfam PF00700 Bacterial flagellin C-terminal helical region 209 291 3.6E-9 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABE28_022450 356f5d251ade82425e018c166180d4cf 292 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 140 5.0E-18 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 ABE28_022450 356f5d251ade82425e018c166180d4cf 292 Gene3D G3DSA:1.20.1330.10 40 237 8.5E-49 T 11-10-2018 ABE28_022450 356f5d251ade82425e018c166180d4cf 292 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 190 4.2E-53 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 ABE28_005765 69d09dfc561d2abd24cc05dfbdc32691 234 Pfam PF12787 EcsC protein family 7 232 1.9E-74 T 11-10-2018 IPR024787 EcsC protein ABE28_005765 69d09dfc561d2abd24cc05dfbdc32691 234 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 1 232 2.0E-66 T 11-10-2018 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 Gene3D G3DSA:1.10.443.10 112 294 1.2E-59 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 SUPERFAMILY SSF56349 7 293 5.89E-58 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 1.6E-22 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 Pfam PF00589 Phage integrase family 113 286 2.1E-50 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 300 1.2E-108 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 300 56.447 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ABE28_007910 f4745af02f5d85ac7af1a5839b2304f0 300 Gene3D G3DSA:1.10.150.130 4 99 7.4E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ABE28_012790 7fe6181bf1f3bb41b6f95601e22720fc 265 SUPERFAMILY SSF52266 55 259 1.69E-37 T 11-10-2018 ABE28_012790 7fe6181bf1f3bb41b6f95601e22720fc 265 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 61 249 5.7E-26 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_012790 7fe6181bf1f3bb41b6f95601e22720fc 265 Gene3D G3DSA:3.40.50.1110 32 259 2.9E-36 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_016115 e8f4d655dad737f706ffff8a95f194c0 394 Gene3D G3DSA:3.40.50.2300 43 367 5.9E-110 T 11-10-2018 ABE28_016115 e8f4d655dad737f706ffff8a95f194c0 394 Pfam PF13458 Periplasmic binding protein 41 385 1.8E-70 T 11-10-2018 IPR028081 Leucine-binding protein domain ABE28_016115 e8f4d655dad737f706ffff8a95f194c0 394 SUPERFAMILY SSF53822 40 387 9.13E-98 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_016115 e8f4d655dad737f706ffff8a95f194c0 394 Gene3D G3DSA:3.40.50.2300 163 293 5.9E-110 T 11-10-2018 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 280 1.3E-71 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 2.1E-86 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 1.3E-43 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 SUPERFAMILY SSF51735 122 278 1.0E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.443 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 Gene3D G3DSA:3.40.50.720 6 258 1.2E-117 T 11-10-2018 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 SUPERFAMILY SSF53223 1 121 4.32E-43 T 11-10-2018 ABE28_014945 c20d648f6546d158c711e65210ac71ef 291 Gene3D G3DSA:3.40.50.10860 8 276 1.2E-117 T 11-10-2018 ABE28_013815 a89ba15127ad5310a53670c8cc723957 290 Gene3D G3DSA:1.10.600.10 2 285 9.7E-90 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_013815 a89ba15127ad5310a53670c8cc723957 290 ProSitePatterns PS01045 Squalene and phytoene synthases signature 2. 163 189 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ABE28_013815 a89ba15127ad5310a53670c8cc723957 290 Pfam PF00494 Squalene/phytoene synthase 21 269 1.7E-64 T 11-10-2018 ABE28_013815 a89ba15127ad5310a53670c8cc723957 290 ProSitePatterns PS01044 Squalene and phytoene synthases signature 1. 132 147 - T 11-10-2018 IPR019845 Squalene/phytoene synthase, conserved site GO:0016765 Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 ABE28_013815 a89ba15127ad5310a53670c8cc723957 290 SUPERFAMILY SSF48576 12 277 1.75E-70 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily ABE28_017485 d2ba6f79d73e95bd888d02ade440e39f 161 Pfam PF09335 SNARE associated Golgi protein 29 155 7.3E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 SMART SM00878 336 441 3.6E-50 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 Gene3D G3DSA:3.30.470.130 1 448 8.2E-192 T 11-10-2018 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.6E-46 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 322 1.7E-77 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 2.8E-35 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 SUPERFAMILY SSF56059 83 348 2.12E-68 T 11-10-2018 ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 SUPERFAMILY SSF52440 1 113 6.12E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_010985 9735537f604605af8827f2d5dc0ad487 449 SUPERFAMILY SSF51246 332 444 6.8E-39 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 316 344 2.5E-5 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 99 107 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 7 360 9.1E-146 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 3 377 48.402 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 Gene3D G3DSA:2.160.10.10 270 384 5.9E-29 T 11-10-2018 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 12 31 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 SUPERFAMILY SSF53448 4 340 6.26E-83 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 Gene3D G3DSA:3.90.550.10 2 268 1.6E-84 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 SUPERFAMILY SSF51161 282 379 9.58E-19 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_012015 79ef1a26f5d29d0c830b0a951ef0e7d2 388 Pfam PF00483 Nucleotidyl transferase 8 261 6.1E-70 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 144 236 2.9E-24 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 369 388 - T 11-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 SUPERFAMILY SSF56645 23 259 2.36E-68 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 28 140 1.1E-22 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Gene3D G3DSA:1.10.540.10 41 142 7.5E-131 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Gene3D G3DSA:1.20.140.10 423 570 1.1E-24 T 11-10-2018 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Gene3D G3DSA:1.20.140.10 248 407 7.5E-131 T 11-10-2018 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 SUPERFAMILY SSF47203 247 413 3.22E-48 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Gene3D G3DSA:2.40.110.10 143 247 7.5E-131 T 11-10-2018 ABE28_004450 74b2024998945a74808dbf59aefad4fe 570 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 248 409 1.1E-41 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 ABE28_008765 82c6645c9bc3af26a98d6ec7a8c042f2 71 Gene3D G3DSA:1.10.260.40 10 69 3.3E-14 T 11-10-2018 ABE28_008765 82c6645c9bc3af26a98d6ec7a8c042f2 71 SMART SM00530 10 65 5.3E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008765 82c6645c9bc3af26a98d6ec7a8c042f2 71 Pfam PF01381 Helix-turn-helix 19 65 3.7E-10 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008765 82c6645c9bc3af26a98d6ec7a8c042f2 71 SUPERFAMILY SSF47413 10 68 5.63E-13 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_005895 b1896dc4ed29533f2f8565ab24f0b58f 70 Pfam PF10803 Spore germination GerPB 1 51 2.4E-27 T 11-10-2018 IPR024255 Spore germination GerPB ABE28_005895 b1896dc4ed29533f2f8565ab24f0b58f 70 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 66 1.0E-13 T 11-10-2018 IPR024255 Spore germination GerPB ABE28_015880 7c137a5a2c845c9f800bf7ed9b18397e 293 SUPERFAMILY SSF53448 5 268 1.23E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015880 7c137a5a2c845c9f800bf7ed9b18397e 293 Gene3D G3DSA:3.90.550.10 1 290 1.6E-94 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015880 7c137a5a2c845c9f800bf7ed9b18397e 293 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 263 2.2E-119 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ABE28_015880 7c137a5a2c845c9f800bf7ed9b18397e 293 Pfam PF00483 Nucleotidyl transferase 6 257 1.9E-36 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 Gene3D G3DSA:3.30.70.360 173 287 1.9E-116 T 11-10-2018 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 Pfam PF01546 Peptidase family M20/M25/M40 67 369 3.5E-25 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 SUPERFAMILY SSF55031 178 283 8.37E-28 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 8 361 2.7E-86 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 Gene3D G3DSA:3.40.630.10 8 358 1.9E-116 T 11-10-2018 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 SUPERFAMILY SSF53187 7 369 1.68E-64 T 11-10-2018 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 PIRSF PIRSF005962 5 376 1.3E-105 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 62.12 T 11-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 ABE28_007110 51b611ca652103fbc51505151f7ffd8f 376 Pfam PF07687 Peptidase dimerisation domain 180 271 6.8E-10 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 Gene3D G3DSA:3.10.20.70 2 107 4.6E-45 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 SMART SM01230 105 354 1.3E-142 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 1.7E-185 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 SUPERFAMILY SSF55931 105 442 2.84E-130 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 Gene3D G3DSA:3.30.590.10 108 444 4.0E-147 T 11-10-2018 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 98 2.9E-33 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 3.3E-141 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABE28_008755 dbd8f8363f168046ff979d4a22fc55ca 444 SUPERFAMILY SSF54368 5 104 1.57E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 ABE28_023220 da807eda25bad7333404d3d170a624bb 164 Pfam PF12822 ECF transporter, substrate-specific component 4 146 3.9E-10 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 ABE28_023220 da807eda25bad7333404d3d170a624bb 164 Gene3D G3DSA:1.10.1760.20 1 159 1.1E-17 T 11-10-2018 ABE28_006590 e7bfba9b02b1f5eee2b1f93101bb6580 495 Gene3D G3DSA:3.40.605.10 24 487 1.2E-203 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_006590 e7bfba9b02b1f5eee2b1f93101bb6580 495 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_006590 e7bfba9b02b1f5eee2b1f93101bb6580 495 Gene3D G3DSA:3.40.309.10 270 459 1.2E-203 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_006590 e7bfba9b02b1f5eee2b1f93101bb6580 495 Pfam PF00171 Aldehyde dehydrogenase family 28 489 5.2E-192 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_006590 e7bfba9b02b1f5eee2b1f93101bb6580 495 SUPERFAMILY SSF53720 14 492 1.7E-185 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Gene3D G3DSA:2.40.30.130 462 553 1.5E-11 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 1.0E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Pfam PF01411 tRNA synthetases class II (A) 8 557 5.9E-213 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Gene3D G3DSA:3.30.54.20 626 679 5.8E-52 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 6.0E-32 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Gene3D G3DSA:3.30.980.10 564 699 5.8E-52 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 SUPERFAMILY SSF101353 246 438 5.75E-70 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Gene3D G3DSA:3.30.930.10 4 242 2.6E-94 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 184.509 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Pfam PF02272 DHHA1 domain 737 874 1.7E-31 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 SUPERFAMILY SSF50447 455 552 1.41E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 Gene3D G3DSA:3.10.310.40 765 875 3.5E-37 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 SMART SM00863 655 698 1.1E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 SUPERFAMILY SSF55681 5 245 2.98E-88 T 11-10-2018 ABE28_015745 c9ef09d801207c2b7d7146c0c5ab07dc 878 SUPERFAMILY SSF55186 554 719 4.06E-52 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 ABE28_013695 667dbfe8d011895be1d93f9c4140025f 101 Gene3D G3DSA:3.40.50.2300 1 101 2.9E-26 T 11-10-2018 ABE28_013695 667dbfe8d011895be1d93f9c4140025f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.5E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_013695 667dbfe8d011895be1d93f9c4140025f 101 SUPERFAMILY SSF52794 1 101 1.6E-25 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_013875 2fab79c5de849619141f1637c16d7a47 305 Pfam PF01966 HD domain 89 212 2.5E-20 T 11-10-2018 IPR006674 HD domain ABE28_013875 2fab79c5de849619141f1637c16d7a47 305 SMART SM00471 85 221 4.5E-8 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_013875 2fab79c5de849619141f1637c16d7a47 305 SUPERFAMILY SSF109604 84 244 7.54E-32 T 11-10-2018 ABE28_013875 2fab79c5de849619141f1637c16d7a47 305 Gene3D G3DSA:1.10.3210.10 4 252 4.2E-64 T 11-10-2018 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 Pfam PF00312 Ribosomal protein S15 8 88 4.4E-38 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-35 T 11-10-2018 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 Gene3D G3DSA:1.10.287.10 2 89 1.0E-36 T 11-10-2018 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 8.5E-41 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 SMART SM01387 8 88 3.6E-52 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 SUPERFAMILY SSF47060 3 89 7.06E-37 T 11-10-2018 IPR009068 S15/NS1, RNA-binding ABE28_008190 c08f275e3dff1a01f19790e435a8bd5c 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.604 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 Gene3D G3DSA:3.40.50.300 1 240 3.3E-78 T 11-10-2018 ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 Pfam PF00005 ABC transporter 17 165 9.9E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 SUPERFAMILY SSF52540 1 234 4.52E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 PIRSF PIRSF039085 1 241 2.0E-115 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_012235 1fd2d5fe10beca377fb0c291f3867c56 242 SMART SM00382 26 213 2.8E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020705 7ffbafe1cb84e145b407b7eaec355f17 263 Gene3D G3DSA:3.40.50.1820 23 263 6.1E-38 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020705 7ffbafe1cb84e145b407b7eaec355f17 263 Pfam PF00326 Prolyl oligopeptidase family 68 261 8.4E-19 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ABE28_020705 7ffbafe1cb84e145b407b7eaec355f17 263 SUPERFAMILY SSF53474 12 259 9.51E-40 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_019930 071bec8cdd036828f35f4b19663c282e 67 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 5 67 5.9E-30 T 11-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon ABE28_012660 1fff48892571c63ce8a7d353be90336a 316 Gene3D G3DSA:3.10.180.10 7 300 3.0E-118 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012660 1fff48892571c63ce8a7d353be90336a 316 SUPERFAMILY SSF54593 5 291 2.03E-47 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012660 1fff48892571c63ce8a7d353be90336a 316 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 266 1.2E-29 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_012660 1fff48892571c63ce8a7d353be90336a 316 Gene3D G3DSA:3.10.180.10 67 210 3.0E-118 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_022850 f80afef8c1d4bd08429be3c80577d190 172 SUPERFAMILY SSF81573 75 133 8.89E-10 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily ABE28_022850 f80afef8c1d4bd08429be3c80577d190 172 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 22 167 2.2E-42 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 ABE28_022850 f80afef8c1d4bd08429be3c80577d190 172 Pfam PF00430 ATP synthase B/B' CF(0) 19 149 1.2E-38 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABE28_022850 f80afef8c1d4bd08429be3c80577d190 172 Hamap MF_01398 ATP synthase subunit b [atpF]. 12 150 13.544 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 ABE28_021420 c1c67a7b0737caabeec6c1efa55946aa 204 Pfam PF11724 YvbH-like oligomerisation region 144 204 2.5E-24 T 11-10-2018 IPR021722 Uncharacterised domain YvbH-like, oligomerisation domain ABE28_021420 c1c67a7b0737caabeec6c1efa55946aa 204 SUPERFAMILY SSF50729 14 203 3.81E-65 T 11-10-2018 ABE28_021420 c1c67a7b0737caabeec6c1efa55946aa 204 Gene3D G3DSA:1.10.287.210 116 204 1.5E-30 T 11-10-2018 ABE28_021420 c1c67a7b0737caabeec6c1efa55946aa 204 Pfam PF08000 Bacterial PH domain 10 132 1.2E-33 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain ABE28_021420 c1c67a7b0737caabeec6c1efa55946aa 204 Gene3D G3DSA:2.30.29.50 12 115 1.1E-45 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily ABE28_021970 61bb1f1db26c942fb0bb1a842ba4e5e0 162 Pfam PF12688 Tetratrico peptide repeat 37 153 5.5E-15 T 11-10-2018 ABE28_021970 61bb1f1db26c942fb0bb1a842ba4e5e0 162 SUPERFAMILY SSF48452 5 153 2.69E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_021970 61bb1f1db26c942fb0bb1a842ba4e5e0 162 Pfam PF13174 Tetratricopeptide repeat 6 32 0.098 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_021970 61bb1f1db26c942fb0bb1a842ba4e5e0 162 Gene3D G3DSA:1.25.40.10 45 153 4.0E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_021955 139d9c3788e1f6e6df1e6343289f14c8 89 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 14 88 1.0E-5 T 11-10-2018 ABE28_021955 139d9c3788e1f6e6df1e6343289f14c8 89 Pfam PF07293 Protein of unknown function (DUF1450) 15 88 8.3E-14 T 11-10-2018 IPR009910 Protein of unknown function DUF1450 ABE28_014575 57cd13ae8024d4f12e7d124007dda9ce 494 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 29 480 1.1E-147 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_014575 57cd13ae8024d4f12e7d124007dda9ce 494 PIRSF PIRSF005690 8 494 8.5E-131 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 463 1.2E-105 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 PRINTS PR00095 Anthranilate synthase component I signature 412 426 2.8E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 PRINTS PR00095 Anthranilate synthase component I signature 305 318 2.8E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 PRINTS PR00095 Anthranilate synthase component I signature 397 411 2.8E-5 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 SUPERFAMILY SSF56322 31 464 1.57E-95 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 Gene3D G3DSA:3.60.120.10 6 466 1.7E-106 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 Pfam PF00425 chorismate binding enzyme 202 455 4.3E-73 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_020815 19f4d7aac2b9122499550b2120b41dd2 469 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 465 28.366 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 SMART SM00866 92 231 9.6E-35 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 Gene3D G3DSA:3.40.1410.10 74 237 4.5E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 SUPERFAMILY SSF64288 58 237 1.46E-47 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 Gene3D G3DSA:1.10.10.10 6 73 6.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 6.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 6.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 70 5.9E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 SMART SM00345 11 70 2.2E-19 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 Pfam PF07702 UTRA domain 93 230 2.1E-36 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_008665 71fd539835a6af95303d0f9214ea599b 238 SUPERFAMILY SSF46785 4 79 3.85E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 3.0E-66 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 Gene3D G3DSA:1.10.3730.40 182 338 1.9E-69 T 11-10-2018 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 PIRSF PIRSF000116 202 332 1.5E-15 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 PIRSF PIRSF000116 1 206 8.9E-45 T 11-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 SUPERFAMILY SSF48179 183 330 4.25E-70 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 45.064 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 Gene3D G3DSA:3.40.50.720 1 181 4.6E-78 T 11-10-2018 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 16 177 1.3E-77 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 SUPERFAMILY SSF51735 3 182 6.9E-73 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016535 dc1b663216c68434dcd17928a6686f49 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 5.0E-145 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 Gene3D G3DSA:3.40.50.300 284 539 2.3E-44 T 11-10-2018 ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 SUPERFAMILY SSF52540 2 255 1.6E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 Gene3D G3DSA:3.40.50.300 1 278 7.3E-60 T 11-10-2018 ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 SUPERFAMILY SSF52540 297 529 1.7E-38 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 Pfam PF00005 ABC transporter 18 184 2.3E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 Pfam PF12848 ABC transporter 224 303 7.9E-20 T 11-10-2018 IPR032781 ABC-transporter extension domain ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 SMART SM00382 344 514 0.005 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 SMART SM00382 26 238 1.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012895 b998062b590db33d003a509e3bd0ab75 539 Pfam PF00005 ABC transporter 335 468 2.6E-15 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 14 174 5.4E-40 T 11-10-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Gene3D G3DSA:3.40.920.10 1 184 6.4E-27 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Gene3D G3DSA:3.40.50.970 185 386 1.6E-76 T 11-10-2018 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Gene3D G3DSA:3.40.50.920 468 581 1.6E-28 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 SUPERFAMILY SSF53323 1 221 2.35E-44 T 11-10-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 TIGRFAM TIGR03710 OAFO_sf: 2-oxoacid:acceptor oxidoreductase, alpha subunit 5 575 6.0E-213 T 11-10-2018 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit KEGG: 00020+1.2.7.3|KEGG: 00720+1.2.7.3|MetaCyc: PWY-5392|MetaCyc: PWY-6969 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 210 447 4.3E-63 T 11-10-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 SUPERFAMILY SSF52518 196 458 1.36E-72 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 SUPERFAMILY SSF52922 470 580 3.77E-23 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_008355 a8b969263196b0ee16d6e986fe9a51a1 585 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 477 571 5.5E-12 T 11-10-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II ABE28_009650 9ecbda4c8302b55068d0e90c24bb8ed9 128 Gene3D G3DSA:3.10.180.10 8 127 7.4E-30 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_009650 9ecbda4c8302b55068d0e90c24bb8ed9 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 6.9E-15 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_009650 9ecbda4c8302b55068d0e90c24bb8ed9 128 SUPERFAMILY SSF54593 2 127 2.15E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 PIRSF PIRSF036492 26 475 3.7E-89 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 244 251 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 Gene3D G3DSA:3.40.309.10 249 440 4.1E-167 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 Gene3D G3DSA:3.40.605.10 9 468 4.1E-167 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 SUPERFAMILY SSF53720 4 470 1.11E-154 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_013555 ca0fdca1c11835334bd5719bc19b01f5 475 Pfam PF00171 Aldehyde dehydrogenase family 13 470 4.9E-164 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_009960 6a8b9ed390eaff05925a6b5f3a59a2a0 77 Gene3D G3DSA:1.10.287.540 1 57 8.1E-22 T 11-10-2018 ABE28_009960 6a8b9ed390eaff05925a6b5f3a59a2a0 77 Hamap MF_01103 UPF0291 protein . 2 60 15.434 T 11-10-2018 IPR009242 Protein of unknown function DUF896 ABE28_009960 6a8b9ed390eaff05925a6b5f3a59a2a0 77 SUPERFAMILY SSF158221 1 42 2.09E-13 T 11-10-2018 ABE28_009960 6a8b9ed390eaff05925a6b5f3a59a2a0 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 5.7E-29 T 11-10-2018 IPR009242 Protein of unknown function DUF896 ABE28_019645 466bb3dd4cba93afd20849c3ed062745 503 SUPERFAMILY SSF56425 284 430 2.49E-25 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_019645 466bb3dd4cba93afd20849c3ed062745 503 Gene3D G3DSA:3.50.50.60 7 489 3.8E-120 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_019645 466bb3dd4cba93afd20849c3ed062745 503 Pfam PF00890 FAD binding domain 8 473 5.7E-52 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_019645 466bb3dd4cba93afd20849c3ed062745 503 Gene3D G3DSA:3.90.700.10 265 427 3.8E-120 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_019645 466bb3dd4cba93afd20849c3ed062745 503 SUPERFAMILY SSF51905 3 494 7.22E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 Gene3D G3DSA:3.40.50.1980 190 323 6.5E-47 T 11-10-2018 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 93 110 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 257 275 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 49 67 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 288 307 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 80 93 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00690 Adhesin family signature 204 225 3.1E-45 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 Gene3D G3DSA:3.40.50.1980 48 189 1.9E-46 T 11-10-2018 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 Pfam PF01297 Zinc-uptake complex component A periplasmic 52 321 2.3E-72 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 49 70 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 204 221 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 74 92 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 93 112 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 301 319 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 PRINTS PR00691 Adhesin B signature 280 298 1.5E-24 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_021865 a701e9d450875f012a862e4d36eaeb2a 323 SUPERFAMILY SSF53807 48 323 3.04E-80 T 11-10-2018 ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 Pfam PF17384 RimP C-terminal SH3 domain 87 156 8.4E-22 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 SUPERFAMILY SSF74942 85 156 4.58E-22 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 Gene3D G3DSA:3.30.300.70 1 81 2.3E-31 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 Pfam PF02576 RimP N-terminal domain 15 84 4.2E-30 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 Gene3D G3DSA:2.30.30.180 88 154 5.6E-24 T 11-10-2018 ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 SUPERFAMILY SSF75420 3 84 7.45E-27 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily ABE28_008145 cec7b02312c163f938451b9e5487ad45 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 24.961 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Gene3D G3DSA:3.30.450.20 3 120 1.5E-15 T 11-10-2018 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 SMART SM00382 178 321 1.7E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 370 379 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 SUPERFAMILY SSF55785 10 115 2.79E-13 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Gene3D G3DSA:1.10.8.60 328 394 6.9E-20 T 11-10-2018 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 SUPERFAMILY SSF52540 160 400 3.79E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 10 130 2.0E-10 T 11-10-2018 IPR000014 PAS domain ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 182 195 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Gene3D G3DSA:3.40.50.300 144 327 3.0E-58 T 11-10-2018 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Pfam PF08448 PAS fold 17 119 1.7E-6 T 11-10-2018 IPR013656 PAS fold-4 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 SUPERFAMILY SSF46689 370 459 2.69E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Pfam PF02954 Bacterial regulatory protein, Fis family 421 459 2.8E-10 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 SMART SM00091 11 79 3.0E-4 T 11-10-2018 IPR000014 PAS domain ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 243 258 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Gene3D G3DSA:1.10.10.60 395 460 3.8E-13 T 11-10-2018 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 442 3.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 442 460 3.0E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_013260 34cf7524f679dc56cfc6eb8d0d9137a1 460 Pfam PF00158 Sigma-54 interaction domain 159 322 1.8E-59 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_017545 99e55a0bb3f6ca286a1926fe99831c86 151 Pfam PF02082 Transcriptional regulator 14 89 1.0E-18 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_017545 99e55a0bb3f6ca286a1926fe99831c86 151 SUPERFAMILY SSF46785 14 137 2.06E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017545 99e55a0bb3f6ca286a1926fe99831c86 151 Gene3D G3DSA:1.10.10.10 7 149 1.5E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017545 99e55a0bb3f6ca286a1926fe99831c86 151 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 55 73 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_017545 99e55a0bb3f6ca286a1926fe99831c86 151 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 17 138 2.9E-21 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_018200 9a4e6114eb531117d180918e0ed93023 218 Pfam PF01569 PAP2 superfamily 79 202 9.0E-9 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_018200 9a4e6114eb531117d180918e0ed93023 218 Gene3D G3DSA:1.20.144.10 123 217 2.0E-6 T 11-10-2018 ABE28_018200 9a4e6114eb531117d180918e0ed93023 218 SUPERFAMILY SSF48317 8 203 1.44E-6 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 SUPERFAMILY SSF53850 88 283 1.11E-31 T 11-10-2018 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 7.4E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 Gene3D G3DSA:3.40.190.290 85 283 2.9E-74 T 11-10-2018 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 Pfam PF03466 LysR substrate binding domain 89 284 6.3E-36 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 Gene3D G3DSA:1.10.10.10 2 84 1.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019650 31d01d5dd7bd13a41c59a86c6c04fde4 286 SUPERFAMILY SSF46785 1 111 1.04E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014890 9236827d2c0935ad99bfce5e3e6e5d30 243 SUPERFAMILY SSF51695 1 238 1.28E-74 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_014890 9236827d2c0935ad99bfce5e3e6e5d30 243 Gene3D G3DSA:3.20.20.190 1 240 7.2E-80 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_014890 9236827d2c0935ad99bfce5e3e6e5d30 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 232 7.5E-49 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 Pfam PF00793 DAHP synthetase I family 116 353 6.8E-81 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 Gene3D G3DSA:1.20.59.10 4 91 1.9E-22 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 100 355 7.4E-119 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 Pfam PF01817 Chorismate mutase type II 12 88 1.5E-16 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 Gene3D G3DSA:3.20.20.70 95 362 2.4E-97 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 SUPERFAMILY SSF48600 6 89 6.87E-18 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 SUPERFAMILY SSF51569 94 355 5.04E-96 T 11-10-2018 ABE28_019110 40f3d441ceabbe45d2b83494caa706dd 368 SMART SM00830 11 90 1.6E-19 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 Gene3D G3DSA:3.30.230.10 1 158 6.5E-61 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 SUPERFAMILY SSF55060 161 281 6.12E-31 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 286 4.0E-107 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 35.637 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 2.0E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 SUPERFAMILY SSF54211 5 158 2.35E-47 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 PIRSF PIRSF010376 2 288 1.3E-97 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 Pfam PF08544 GHMP kinases C terminal 197 270 3.3E-9 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain ABE28_000205 8dd2b295e3dda006a925615186e203d7 289 Gene3D G3DSA:3.30.70.890 162 284 4.3E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily ABE28_019175 b76a26926a8f167a8b4b72fe705d9a46 156 Gene3D G3DSA:3.40.630.30 1 154 5.6E-21 T 11-10-2018 ABE28_019175 b76a26926a8f167a8b4b72fe705d9a46 156 SUPERFAMILY SSF55729 1 155 2.87E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_019175 b76a26926a8f167a8b4b72fe705d9a46 156 Pfam PF00583 Acetyltransferase (GNAT) family 34 135 2.3E-15 T 11-10-2018 IPR000182 GNAT domain ABE28_022790 8a2bd1e50272cd2ed73495a619fd8fdd 172 Gene3D G3DSA:1.20.120.1200 8 165 5.1E-43 T 11-10-2018 ABE28_022790 8a2bd1e50272cd2ed73495a619fd8fdd 172 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 21 161 5.6E-38 T 11-10-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 282 38.432 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 SUPERFAMILY SSF52096 29 284 2.42E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 Pfam PF01039 Carboxyl transferase domain 64 244 1.7E-20 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 Gene3D G3DSA:3.90.226.10 29 282 1.0E-87 T 11-10-2018 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 1.1E-37 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_017005 f4e8e314b299eae88427c4225543aab5 287 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 20 282 3.3E-123 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 ABE28_001420 a514bb49170e6f5c5defc2cdc91f4715 110 SUPERFAMILY SSF52091 4 108 7.26E-27 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_001420 a514bb49170e6f5c5defc2cdc91f4715 110 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 5.1E-34 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 ABE28_001420 a514bb49170e6f5c5defc2cdc91f4715 110 Pfam PF01740 STAS domain 6 100 1.8E-20 T 11-10-2018 IPR002645 STAS domain ABE28_001420 a514bb49170e6f5c5defc2cdc91f4715 110 Gene3D G3DSA:3.30.750.24 1 110 4.5E-28 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_002485 4eaed6dbe59c820438513cda9ce954ae 164 Pfam PF03703 Bacterial PH domain 81 154 1.7E-13 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_008055 5e0d7b150f7d3158c8de996883f08754 288 PIRSF PIRSF003092 1 288 3.0E-80 T 11-10-2018 IPR025501 ATP binding protein MinD ABE28_008055 5e0d7b150f7d3158c8de996883f08754 288 Pfam PF13614 AAA domain 22 185 2.2E-17 T 11-10-2018 IPR025669 AAA domain ABE28_008055 5e0d7b150f7d3158c8de996883f08754 288 SUPERFAMILY SSF52540 20 265 2.38E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008055 5e0d7b150f7d3158c8de996883f08754 288 Gene3D G3DSA:3.40.50.300 21 263 1.2E-54 T 11-10-2018 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 TIGRFAM TIGR02313 HpaI-NOT-DapA: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase 9 300 7.7E-142 T 11-10-2018 IPR012691 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase variant GO:0005737|GO:0008840|GO:0019877 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 SUPERFAMILY SSF51569 9 297 4.19E-100 T 11-10-2018 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 110 126 1.1E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 42 63 1.1E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 78 96 1.1E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 PRINTS PR00146 Dihydrodipicolinate synthase signature 135 152 1.1E-26 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 8 295 56.735 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 SMART SM01130 8 297 1.1E-130 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 12 295 3.3E-94 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 Pfam PF00701 Dihydrodipicolinate synthetase family 9 294 8.8E-89 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 PIRSF PIRSF001365 6 304 1.1E-91 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 Gene3D G3DSA:3.20.20.70 1 299 3.0E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_014100 a390ac35ee7bd28b0a4d398603b5aa8e 305 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 140 171 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ABE28_006685 3a6c19b7247fedc1a8ed6bf1ed62d5b1 299 SUPERFAMILY SSF161098 88 281 4.06E-20 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006685 3a6c19b7247fedc1a8ed6bf1ed62d5b1 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 297 1.2E-25 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_006685 3a6c19b7247fedc1a8ed6bf1ed62d5b1 299 Gene3D G3DSA:1.10.3720.10 84 294 1.6E-17 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 Pfam PF00072 Response regulator receiver domain 6 111 2.4E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 Gene3D G3DSA:3.40.50.2300 2 141 7.4E-34 T 11-10-2018 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 365 37.441 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 PIRSF PIRSF000876 1 365 3.2E-134 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 Pfam PF01339 CheB methylesterase 181 361 2.7E-55 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 Gene3D G3DSA:3.40.50.180 174 363 2.4E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 SMART SM00448 4 127 1.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 SUPERFAMILY SSF52738 177 364 6.93E-60 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal ABE28_008060 cee8e68bfcaf4b84242f03323f754490 365 SUPERFAMILY SSF52172 1 110 3.27E-30 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 Gene3D G3DSA:3.40.50.2300 1 123 2.1E-40 T 11-10-2018 ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 SMART SM00448 3 113 1.2E-46 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 SUPERFAMILY SSF52172 3 188 8.6E-43 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 Gene3D G3DSA:1.10.10.10 125 235 5.8E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 Pfam PF00072 Response regulator receiver domain 5 113 9.0E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 1.3E-29 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_004325 5d29be7a682b8c41e08f1a61417f84bc 237 SMART SM00862 155 231 5.2E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 4.0E-129 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 SUPERFAMILY SSF52096 5 267 2.99E-77 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 Gene3D G3DSA:1.10.12.10 210 260 1.7E-28 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 54.914 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 Gene3D G3DSA:3.90.226.10 1 209 1.5E-75 T 11-10-2018 ABE28_020800 a792946a9459ee1a6e631912ed91723a 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 1.2E-88 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_017040 094b1cec0491e9fd63f39f5dc5c2c180 100 Pfam PF14007 YtpI-like protein 5 90 9.1E-32 T 11-10-2018 IPR025618 YtpI-like protein ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 10 336 1.8E-140 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 Gene3D G3DSA:1.20.120.420 3 148 3.0E-49 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 SUPERFAMILY SSF100950 5 342 1.59E-118 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 39.468 T 11-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 Gene3D G3DSA:3.40.50.10470 149 348 6.8E-69 T 11-10-2018 ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 337 3.3E-127 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 ABE28_013165 e81b976ec7532c28a784ee1c9dfb2285 348 Pfam PF01008 Initiation factor 2 subunit family 49 337 1.3E-87 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 SUPERFAMILY SSF52021 1 145 2.62E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 SUPERFAMILY SSF52317 141 353 6.79E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 356 49.726 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 353 2.2E-149 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 1.0E-11 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.0E-11 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 1.0E-11 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 8.1E-37 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 8.1E-37 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 8.1E-37 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 8.1E-37 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 8.1E-37 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 Gene3D G3DSA:3.50.30.20 1 148 2.7E-57 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 SMART SM01097 1 131 1.9E-90 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 Gene3D G3DSA:3.40.50.880 164 360 3.4E-37 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 Pfam PF00117 Glutamine amidotransferase class-I 174 350 3.9E-47 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.7E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00097 Anthranilate synthase component II signature 327 340 1.8E-6 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.8E-6 T 11-10-2018 ABE28_007625 0ad9bd49c065ca8f3c339c3ea2d35714 368 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.8E-6 T 11-10-2018 ABE28_021710 12d2f296ade392e538ab75fa38f8ae4b 275 Pfam PF01925 Sulfite exporter TauE/SafE 7 268 3.1E-56 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABE28_003650 71646e116bb67cbdf6c6feb6cba546f7 84 Pfam PF14182 YgaB-like protein 3 78 3.2E-27 T 11-10-2018 IPR025572 YgaB-like protein ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 Gene3D G3DSA:1.20.1250.20 218 403 3.6E-27 T 11-10-2018 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 Pfam PF07690 Major Facilitator Superfamily 15 276 7.1E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 Gene3D G3DSA:1.20.1250.20 5 197 4.7E-35 T 11-10-2018 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 PRINTS PR01035 Tetracycline resistance protein signature 82 106 1.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 PRINTS PR01035 Tetracycline resistance protein signature 51 70 1.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 PRINTS PR01035 Tetracycline resistance protein signature 109 130 1.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 PRINTS PR01035 Tetracycline resistance protein signature 343 366 1.9E-7 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_005250 8fed204e955e3e95ed7f6f209cbc9546 403 SUPERFAMILY SSF103473 1 397 1.83E-68 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006600 7f3b0d64448d2072f922bc835cd04c78 210 SUPERFAMILY SSF51391 6 207 6.8E-64 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006600 7f3b0d64448d2072f922bc835cd04c78 210 Gene3D G3DSA:3.20.20.70 1 210 4.3E-70 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_006600 7f3b0d64448d2072f922bc835cd04c78 210 Pfam PF02581 Thiamine monophosphate synthase 10 189 7.1E-62 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006600 7f3b0d64448d2072f922bc835cd04c78 210 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 9 201 4.0E-65 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_006600 7f3b0d64448d2072f922bc835cd04c78 210 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 8 207 27.57 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_014650 1d36bc5339a215d0147a59a8bb650914 215 Pfam PF01944 Stage II sporulation protein M 26 203 3.0E-26 T 11-10-2018 IPR002798 Stage II sporulation protein M-like ABE28_014650 1d36bc5339a215d0147a59a8bb650914 215 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 207 2.3E-73 T 11-10-2018 IPR014196 Stage II sporulation protein M ABE28_014650 1d36bc5339a215d0147a59a8bb650914 215 PIRSF PIRSF038973 1 213 2.8E-73 T 11-10-2018 IPR014196 Stage II sporulation protein M ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SUPERFAMILY SSF81301 185 398 9.32E-67 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Pfam PF13328 HD domain 31 180 7.9E-53 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Gene3D G3DSA:3.10.20.30 387 459 1.0E-33 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Gene3D G3DSA:3.30.70.260 653 732 3.3E-18 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Gene3D G3DSA:1.10.3210.10 1 196 1.2E-88 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SMART SM00954 240 350 2.1E-69 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 2.6E-39 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 729 4.7E-261 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SUPERFAMILY SSF109604 10 196 2.7E-77 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Pfam PF13291 ACT domain 653 729 1.7E-21 T 11-10-2018 IPR002912 ACT domain ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Gene3D G3DSA:3.30.460.10 198 330 1.4E-54 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SUPERFAMILY SSF55021 655 732 6.66E-13 T 11-10-2018 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 Pfam PF02824 TGS domain 394 453 2.2E-23 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SUPERFAMILY SSF81271 381 453 1.18E-23 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 ABE28_016160 b363579a87907d2ba7ccba699716113c 732 SMART SM00471 46 158 6.3E-10 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 SUPERFAMILY SSF51905 1 497 3.37E-68 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 5 499 2.6E-133 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 Pfam PF01593 Flavin containing amine oxidoreductase 12 495 4.4E-34 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 PRINTS PR00419 Adrenodoxin reductase family signature 27 40 6.2E-6 T 11-10-2018 ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 PRINTS PR00419 Adrenodoxin reductase family signature 4 26 6.2E-6 T 11-10-2018 ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 Gene3D G3DSA:3.50.50.60 203 329 1.7E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002635 aaf8d8368ec04160a5dfd0f797adac55 508 Gene3D G3DSA:3.50.50.60 2 115 6.0E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_015045 1664ea7fee93127fd4465d7d2d79223b 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 341 1.0E-153 T 11-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 ABE28_015045 1664ea7fee93127fd4465d7d2d79223b 341 SUPERFAMILY SSF102114 84 231 4.32E-5 T 11-10-2018 ABE28_015045 1664ea7fee93127fd4465d7d2d79223b 341 Gene3D G3DSA:3.80.30.30 115 341 1.4E-90 T 11-10-2018 ABE28_015045 1664ea7fee93127fd4465d7d2d79223b 341 Gene3D G3DSA:3.40.50.12110 2 114 7.1E-47 T 11-10-2018 ABE28_001685 d63e27c0b61e8dc072c803afac469e8a 333 Gene3D G3DSA:3.40.50.1980 42 178 1.1E-25 T 11-10-2018 ABE28_001685 d63e27c0b61e8dc072c803afac469e8a 333 Gene3D G3DSA:3.40.50.1980 179 333 9.7E-38 T 11-10-2018 ABE28_001685 d63e27c0b61e8dc072c803afac469e8a 333 SUPERFAMILY SSF53807 56 327 1.73E-53 T 11-10-2018 ABE28_001685 d63e27c0b61e8dc072c803afac469e8a 333 Pfam PF01497 Periplasmic binding protein 119 304 2.2E-27 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_014285 096f306e1919b757fd109d04f994536c 82 Gene3D G3DSA:2.60.40.50 1 77 3.2E-40 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily ABE28_014285 096f306e1919b757fd109d04f994536c 82 Pfam PF02081 Tryptophan RNA-binding attenuator protein 8 74 1.8E-38 T 11-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain ABE28_014285 096f306e1919b757fd109d04f994536c 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 10 27 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 ABE28_014285 096f306e1919b757fd109d04f994536c 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 59 75 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 ABE28_014285 096f306e1919b757fd109d04f994536c 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 43 59 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 ABE28_014285 096f306e1919b757fd109d04f994536c 82 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 27 43 3.7E-34 T 11-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 ABE28_014285 096f306e1919b757fd109d04f994536c 82 SUPERFAMILY SSF51219 8 75 4.71E-33 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily ABE28_005820 4707d5abd5f1ab8b53f665c1d7cb637a 175 SUPERFAMILY SSF109604 14 137 2.47E-21 T 11-10-2018 ABE28_005820 4707d5abd5f1ab8b53f665c1d7cb637a 175 TIGRFAM TIGR00277 HDIG: HDIG domain 22 90 1.7E-7 T 11-10-2018 IPR006675 HDIG domain ABE28_005820 4707d5abd5f1ab8b53f665c1d7cb637a 175 Pfam PF01966 HD domain 24 135 7.3E-14 T 11-10-2018 IPR006674 HD domain ABE28_005820 4707d5abd5f1ab8b53f665c1d7cb637a 175 Gene3D G3DSA:1.10.3210.10 6 162 6.3E-16 T 11-10-2018 ABE28_005820 4707d5abd5f1ab8b53f665c1d7cb637a 175 SMART SM00471 19 148 3.9E-7 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 PIRSF PIRSF001357 1 221 1.7E-76 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 218 37.586 T 11-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 SUPERFAMILY SSF51569 3 217 3.14E-84 T 11-10-2018 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 214 1.2E-92 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 Gene3D G3DSA:3.20.20.70 1 221 4.7E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 Pfam PF01791 DeoC/LacD family aldolase 8 213 2.6E-17 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_015485 4ef6a248ddb5a7832cfb81cd0265a91e 223 SMART SM01133 4 216 1.4E-101 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 1.2E-55 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 SUPERFAMILY SSF53335 1 237 1.46E-49 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 26 215 3.8E-50 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 Gene3D G3DSA:3.40.50.150 1 238 1.6E-89 T 11-10-2018 ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 PIRSF PIRSF003078 1 220 4.2E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABE28_023775 068d5f464f284d4932ffdb66896fbd8c 238 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.016 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 SUPERFAMILY SSF75217 3 155 2.29E-43 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 Pfam PF00588 SpoU rRNA Methylase family 3 145 2.1E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 PIRSF PIRSF029256 2 157 3.3E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 2 156 1.7E-67 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 34.633 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 ABE28_004560 b2be8e29c2bda6882d6b68c36ed825d2 162 Gene3D G3DSA:3.40.1280.10 1 161 1.7E-68 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 Pfam PF08245 Mur ligase middle domain 37 216 9.1E-9 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 Gene3D G3DSA:3.40.1190.10 29 238 1.8E-16 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 4 383 5.4E-171 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 1.7E-96 T 11-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 ABE28_017825 3b34362c8fa231ad0dc62142d59173ab 393 SUPERFAMILY SSF53623 33 235 8.5E-17 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_021580 dd4b50a7e68c58a591d838950d590c68 120 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 5 109 4.2E-36 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 ABE28_021580 dd4b50a7e68c58a591d838950d590c68 120 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 91 108 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 ABE28_021580 dd4b50a7e68c58a591d838950d590c68 120 SUPERFAMILY SSF89360 4 98 7.46E-28 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_021580 dd4b50a7e68c58a591d838950d590c68 120 Gene3D G3DSA:2.60.300.12 4 113 5.9E-35 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_021580 dd4b50a7e68c58a591d838950d590c68 120 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 105 1.1E-19 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 ABE28_021985 c293b740188a88ab352a6f802cc792c3 182 Pfam PF03413 Peptidase propeptide and YPEB domain 46 102 2.8E-5 T 11-10-2018 IPR025711 PepSY domain ABE28_021985 c293b740188a88ab352a6f802cc792c3 182 Pfam PF03413 Peptidase propeptide and YPEB domain 121 179 3.3E-15 T 11-10-2018 IPR025711 PepSY domain ABE28_021985 c293b740188a88ab352a6f802cc792c3 182 Gene3D G3DSA:3.10.450.40 40 105 9.9E-9 T 11-10-2018 ABE28_021985 c293b740188a88ab352a6f802cc792c3 182 Gene3D G3DSA:3.10.450.40 112 182 3.5E-22 T 11-10-2018 ABE28_024240 5ac54ba7f22f352642c725dfd2c44800 268 Gene3D G3DSA:3.40.50.150 74 257 5.3E-42 T 11-10-2018 ABE28_024240 5ac54ba7f22f352642c725dfd2c44800 268 SUPERFAMILY SSF53335 53 231 1.66E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024240 5ac54ba7f22f352642c725dfd2c44800 268 TIGRFAM TIGR03704 PrmC_rel_meth: putative protein-(glutamine-N5) methyltransferase, unknown substrate-specific 17 264 3.5E-123 T 11-10-2018 IPR022446 Conserved hypothetical protein CHP03704, protein-(glutamine-N5) methyltransferase ABE28_024240 5ac54ba7f22f352642c725dfd2c44800 268 Pfam PF05175 Methyltransferase small domain 74 186 2.6E-10 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABE28_024240 5ac54ba7f22f352642c725dfd2c44800 268 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 44 243 1.7E-41 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ABE28_017645 0e902b000bb389cad87725ed68dec4a7 250 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_017645 0e902b000bb389cad87725ed68dec4a7 250 Gene3D G3DSA:3.40.50.300 1 233 4.5E-72 T 11-10-2018 ABE28_017645 0e902b000bb389cad87725ed68dec4a7 250 Pfam PF00005 ABC transporter 17 157 3.1E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_017645 0e902b000bb389cad87725ed68dec4a7 250 SMART SM00382 26 207 2.4E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_017645 0e902b000bb389cad87725ed68dec4a7 250 SUPERFAMILY SSF52540 1 230 8.35E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 Gene3D G3DSA:1.20.1050.90 119 311 6.8E-111 T 11-10-2018 ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 SUPERFAMILY SSF52540 1 350 3.56E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 344 6.1E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 104.785 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 366 3.5E-135 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 ABE28_023820 4f97a5f65e03be43d7af78dc64e37c90 372 Gene3D G3DSA:3.40.50.300 6 344 6.8E-111 T 11-10-2018 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 Gene3D G3DSA:3.30.70.260 1 80 2.7E-32 T 11-10-2018 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 SUPERFAMILY SSF55021 80 161 1.99E-26 T 11-10-2018 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 1.0E-21 T 11-10-2018 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 Gene3D G3DSA:3.30.70.1150 84 163 1.9E-28 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 SUPERFAMILY SSF55021 4 77 1.07E-21 T 11-10-2018 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 Pfam PF01842 ACT domain 4 68 2.5E-17 T 11-10-2018 IPR002912 ACT domain ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 8.6E-64 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABE28_016540 f374f6ffc79fc31d11af8ee6149e72b0 170 Pfam PF10369 Small subunit of acetolactate synthase 85 158 3.6E-28 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 ABE28_021250 e0da426371af45a3758526a10e3ef71b 385 Pfam PF00872 Transposase, Mutator family 1 377 4.1E-131 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ABE28_013740 060e2948fa7fd861c1affa858961b9b3 295 Pfam PF02274 Amidinotransferase 71 283 6.9E-37 T 11-10-2018 ABE28_013740 060e2948fa7fd861c1affa858961b9b3 295 Gene3D G3DSA:3.75.10.10 1 284 2.1E-59 T 11-10-2018 ABE28_013740 060e2948fa7fd861c1affa858961b9b3 295 SUPERFAMILY SSF55909 2 284 3.53E-51 T 11-10-2018 ABE28_017385 c23258f4155532757ed2a7fec885481f 103 SUPERFAMILY SSF52833 7 102 9.84E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_017385 c23258f4155532757ed2a7fec885481f 103 Pfam PF00085 Thioredoxin 11 101 3.9E-18 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_017385 c23258f4155532757ed2a7fec885481f 103 Gene3D G3DSA:3.40.30.10 1 102 1.6E-25 T 11-10-2018 ABE28_015770 678d38ac4c40c4d6b43fff06fa3a595e 188 Pfam PF04011 LemA family 7 184 8.6E-75 T 11-10-2018 IPR007156 LemA ABE28_015770 678d38ac4c40c4d6b43fff06fa3a595e 188 SUPERFAMILY SSF140478 26 173 1.06E-57 T 11-10-2018 IPR023353 LemA-like domain superfamily ABE28_015770 678d38ac4c40c4d6b43fff06fa3a595e 188 Gene3D G3DSA:1.20.1440.20 17 184 1.2E-72 T 11-10-2018 IPR023353 LemA-like domain superfamily ABE28_018925 8612dcaf5b9500e70465e6c0c310c6c4 105 Gene3D G3DSA:3.90.1210.30 6 89 9.7E-24 T 11-10-2018 ABE28_018925 8612dcaf5b9500e70465e6c0c310c6c4 105 Pfam PF08666 SAF domain 14 87 6.4E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_018925 8612dcaf5b9500e70465e6c0c310c6c4 105 SMART SM00858 14 87 3.5E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 ABE28_020565 62a4039876c49f2dd741d078a7895ba8 183 Pfam PF14417 MEDS: MEthanogen/methylotroph, DcmR Sensory domain 9 162 8.6E-18 T 11-10-2018 IPR025847 MEDS domain ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 Gene3D G3DSA:1.10.1370.30 5 504 8.5E-210 T 11-10-2018 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 248 267 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 382 399 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 450 468 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 231 247 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 268 287 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 151 171 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 405 426 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 295 311 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 336 355 2.2E-80 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 SUPERFAMILY SSF55486 11 498 7.51E-120 T 11-10-2018 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 PIRSF PIRSF006615 7 504 1.0E-197 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_013950 8e49ee7dca67e8308470f10c35bda761 505 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 6 498 1.0E-221 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 258 365 3.4E-17 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Pfam PF11798 IMS family HHH motif 179 211 5.2E-8 T 11-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 SUPERFAMILY SSF100879 258 358 4.51E-15 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Gene3D G3DSA:2.30.40.20 31 83 1.9E-31 T 11-10-2018 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Gene3D G3DSA:1.10.150.20 191 243 7.7E-16 T 11-10-2018 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Gene3D G3DSA:3.30.70.270 12 168 1.9E-31 T 11-10-2018 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Gene3D G3DSA:3.30.1490.100 258 367 1.5E-16 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 SUPERFAMILY SSF56672 12 247 3.65E-54 T 11-10-2018 ABE28_014705 668e90b9fdd7a8301d051a27f4144393 420 Pfam PF00817 impB/mucB/samB family 15 164 9.9E-29 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 ABE28_011925 bbb645e80c6c2e4dfd6d147d6e61f068 305 Gene3D G3DSA:3.40.190.120 139 243 4.1E-96 T 11-10-2018 ABE28_011925 bbb645e80c6c2e4dfd6d147d6e61f068 305 SUPERFAMILY SSF53850 35 303 3.96E-65 T 11-10-2018 ABE28_011925 bbb645e80c6c2e4dfd6d147d6e61f068 305 Gene3D G3DSA:3.40.190.10 37 299 4.1E-96 T 11-10-2018 ABE28_011925 bbb645e80c6c2e4dfd6d147d6e61f068 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 35 300 2.3E-55 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 ABE28_016110 682387e129af2a3446d7f4ef07e62139 392 SUPERFAMILY SSF53822 38 386 7.07E-94 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_016110 682387e129af2a3446d7f4ef07e62139 392 Gene3D G3DSA:3.40.50.2300 160 290 4.3E-106 T 11-10-2018 ABE28_016110 682387e129af2a3446d7f4ef07e62139 392 Gene3D G3DSA:3.40.50.2300 40 366 4.3E-106 T 11-10-2018 ABE28_016110 682387e129af2a3446d7f4ef07e62139 392 Pfam PF13458 Periplasmic binding protein 38 382 1.2E-65 T 11-10-2018 IPR028081 Leucine-binding protein domain ABE28_016800 b549a6fcf4562f9b5681876340117ab8 370 Pfam PF13556 PucR C-terminal helix-turn-helix domain 306 364 2.1E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_016800 b549a6fcf4562f9b5681876340117ab8 370 Gene3D G3DSA:1.10.10.2840 246 368 1.7E-21 T 11-10-2018 ABE28_016800 b549a6fcf4562f9b5681876340117ab8 370 Pfam PF05651 Putative sugar diacid recognition 6 135 5.5E-45 T 11-10-2018 IPR008599 Putative sugar diacid recognition ABE28_005500 f73340d7df55400324486f2268934a98 672 Gene3D G3DSA:3.40.50.300 424 668 4.8E-84 T 11-10-2018 ABE28_005500 f73340d7df55400324486f2268934a98 672 SMART SM00382 453 639 1.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005500 f73340d7df55400324486f2268934a98 672 Gene3D G3DSA:1.20.1560.10 129 412 2.4E-64 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_005500 f73340d7df55400324486f2268934a98 672 Pfam PF00005 ABC transporter 444 593 7.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_005500 f73340d7df55400324486f2268934a98 672 Pfam PF00664 ABC transporter transmembrane region 146 379 1.6E-43 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_005500 f73340d7df55400324486f2268934a98 672 SUPERFAMILY SSF52540 421 663 1.96E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005500 f73340d7df55400324486f2268934a98 672 ProSitePatterns PS00211 ABC transporters family signature. 565 579 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_005500 f73340d7df55400324486f2268934a98 672 SUPERFAMILY SSF90123 5 411 4.05E-68 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 3 322 8.6E-127 T 11-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 Gene3D G3DSA:3.30.930.10 3 242 3.3E-80 T 11-10-2018 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 SUPERFAMILY SSF55681 4 242 4.19E-80 T 11-10-2018 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 49 150 4.1E-10 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 Gene3D G3DSA:3.30.390.50 243 329 8.7E-34 T 11-10-2018 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 SUPERFAMILY SSF82649 243 329 2.35E-28 T 11-10-2018 ABE28_005810 8bb1e5f245cb47771dce6c175f421927 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 328 3.1E-32 T 11-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 ABE28_017535 e44a5dbc708f9f444ecae3688c74c650 524 Pfam PF02652 L-lactate permease 14 518 1.3E-158 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABE28_017535 e44a5dbc708f9f444ecae3688c74c650 524 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 519 2.1E-155 T 11-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 SUPERFAMILY SSF53774 1 316 3.4E-86 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 Pfam PF00710 Asparaginase, N-terminal 3 192 2.2E-51 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 PIRSF PIRSF500176 1 321 1.7E-87 T 11-10-2018 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 Gene3D G3DSA:3.40.50.40 208 319 7.8E-27 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 PIRSF PIRSF001220 1 321 9.5E-95 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.5E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 1.5E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.5E-18 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 SMART SM00870 3 318 2.4E-107 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_014395 599f31c7c907c49cd2ec092a5e880382 321 Gene3D G3DSA:3.40.50.1170 1 207 3.3E-60 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Gene3D G3DSA:3.20.20.80 145 544 1.0E-155 T 11-10-2018 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 SMART SM00642 172 518 2.2E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Gene3D G3DSA:2.60.40.10 17 142 8.1E-49 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Pfam PF00128 Alpha amylase, catalytic domain 197 269 2.2E-11 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 SUPERFAMILY SSF51011 546 648 1.98E-30 T 11-10-2018 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 PIRSF PIRSF000463 7 658 2.6E-272 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 550 647 6.2E-19 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 46 128 6.8E-23 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 SUPERFAMILY SSF51445 101 539 6.72E-105 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Gene3D G3DSA:2.60.40.1180 545 651 7.2E-34 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 21 649 41.551 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 SUPERFAMILY SSF81296 58 128 1.23E-10 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_012020 cb9a42764f7124df2f27274561464eb2 659 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 30 645 1.9E-262 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 ABE28_000175 5505441b62200b0230946494b5bc2893 397 Pfam PF03990 Domain of unknown function (DUF348) 101 137 3.6E-12 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ABE28_000175 5505441b62200b0230946494b5bc2893 397 Pfam PF03990 Domain of unknown function (DUF348) 155 193 5.6E-13 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ABE28_000175 5505441b62200b0230946494b5bc2893 397 Pfam PF03990 Domain of unknown function (DUF348) 40 78 4.7E-11 T 11-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 ABE28_000175 5505441b62200b0230946494b5bc2893 397 Pfam PF07501 G5 domain 212 284 6.7E-19 T 11-10-2018 IPR011098 G5 domain ABE28_000175 5505441b62200b0230946494b5bc2893 397 Gene3D G3DSA:2.20.230.10 158 285 8.5E-17 T 11-10-2018 ABE28_000175 5505441b62200b0230946494b5bc2893 397 SUPERFAMILY SSF50685 338 385 1.08E-8 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_000175 5505441b62200b0230946494b5bc2893 397 SMART SM01208 207 285 4.0E-25 T 11-10-2018 IPR011098 G5 domain ABE28_000175 5505441b62200b0230946494b5bc2893 397 Pfam PF06725 3D domain 337 396 1.2E-21 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABE28_013595 62126b2e0a44673620dc030db642e816 388 Gene3D G3DSA:3.40.50.10490 205 381 6.2E-63 T 11-10-2018 ABE28_013595 62126b2e0a44673620dc030db642e816 388 Gene3D G3DSA:3.40.50.10490 2 204 2.5E-55 T 11-10-2018 ABE28_013595 62126b2e0a44673620dc030db642e816 388 SUPERFAMILY SSF53697 17 378 1.06E-45 T 11-10-2018 ABE28_013595 62126b2e0a44673620dc030db642e816 388 Pfam PF01380 SIS domain 230 310 7.5E-7 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_013595 62126b2e0a44673620dc030db642e816 388 Pfam PF01380 SIS domain 57 190 2.4E-7 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_003470 bd763c2ae293c3ba6115d03060d4e832 352 Pfam PF09925 Predicted membrane protein (DUF2157) 24 153 1.0E-28 T 11-10-2018 IPR018677 Domain of unknown function DUF2157 ABE28_024085 1769fa76f497d9701371c417dd4f5c9f 140 Pfam PF13789 Domain of unknown function (DUF4181) 18 128 1.5E-28 T 11-10-2018 IPR025441 Protein of unknown function DUF4181 ABE28_005580 e327c5d5c7e72b17d98f6a6e479d56ea 398 Gene3D G3DSA:3.30.470.20 269 385 8.7E-7 T 11-10-2018 ABE28_005580 e327c5d5c7e72b17d98f6a6e479d56ea 398 Pfam PF14398 YheC/D like ATP-grasp 153 378 2.3E-52 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D ABE28_005580 e327c5d5c7e72b17d98f6a6e479d56ea 398 SUPERFAMILY SSF56059 180 367 1.14E-12 T 11-10-2018 ABE28_013390 bb19bd7d8b8d16329ad432dbd9772c56 257 Pfam PF03741 Integral membrane protein TerC family 36 219 2.2E-53 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABE28_013390 bb19bd7d8b8d16329ad432dbd9772c56 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 33 246 4.2E-77 T 11-10-2018 IPR022493 Integral membrane YkoY ABE28_012950 fcdb05aecf62580ad1ea33059a4f4d60 123 SUPERFAMILY SSF54593 6 121 9.63E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012950 fcdb05aecf62580ad1ea33059a4f4d60 123 Gene3D G3DSA:3.10.180.10 9 121 1.7E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Gene3D G3DSA:3.40.50.140 1 134 1.2E-53 T 11-10-2018 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Pfam PF01751 Toprim domain 5 113 8.8E-30 T 11-10-2018 IPR006171 TOPRIM domain ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Gene3D G3DSA:1.10.460.10 135 550 3.5E-168 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 SMART SM00493 3 103 3.8E-32 T 11-10-2018 IPR006171 TOPRIM domain ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Gene3D G3DSA:1.10.290.10 250 385 3.5E-168 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 SMART SM00437 242 510 7.7E-125 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 613 5.1E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 687 0.015 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 1.1E-11 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Gene3D G3DSA:2.70.20.10 184 457 3.5E-168 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Pfam PF01131 DNA topoisomerase 128 548 3.5E-135 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 2.0E-261 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 6.4E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 55.44 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 SUPERFAMILY SSF56712 4 623 2.35E-196 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 SMART SM00436 104 192 4.2E-53 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 SUPERFAMILY SSF57783 576 613 3.23E-13 T 11-10-2018 ABE28_007900 85fc85bb45e7198be2fa68bbfbae3900 691 Gene3D G3DSA:3.30.65.10 559 617 1.8E-14 T 11-10-2018 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 SMART SM00283 232 507 4.3E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 Gene3D G3DSA:1.10.287.950 177 510 5.7E-50 T 11-10-2018 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 304 454 1.3E-34 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 330 357 3.4E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 249 278 3.4E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 359 388 3.4E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_002815 7048e6b9956db084e7e35c54058fd096 512 SUPERFAMILY SSF58104 260 503 7.98E-48 T 11-10-2018 ABE28_002720 9023ca2c9fc2e7cf584b101c24efbecb 279 PIRSF PIRSF035875 2 277 1.3E-84 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_002720 9023ca2c9fc2e7cf584b101c24efbecb 279 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 11 272 3.6E-66 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_002720 9023ca2c9fc2e7cf584b101c24efbecb 279 Pfam PF03631 Virulence factor BrkB 23 273 3.5E-73 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_020455 ced7b42450cb4078b9efe425cc1ceed5 425 SUPERFAMILY SSF103473 17 411 3.53E-31 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_020455 ced7b42450cb4078b9efe425cc1ceed5 425 Gene3D G3DSA:1.20.1250.20 223 418 3.9E-5 T 11-10-2018 ABE28_020455 ced7b42450cb4078b9efe425cc1ceed5 425 Pfam PF07690 Major Facilitator Superfamily 25 366 4.3E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_020455 ced7b42450cb4078b9efe425cc1ceed5 425 Gene3D G3DSA:1.20.1250.20 17 205 3.3E-16 T 11-10-2018 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 SUPERFAMILY SSF53659 2 423 3.96E-143 T 11-10-2018 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 1.2E-123 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 SMART SM01329 21 418 4.8E-189 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 422 1.8E-219 T 11-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 ABE28_016955 4375a9a745c62d3a723d41a5d479054d 423 Gene3D G3DSA:3.40.718.10 1 423 6.6E-182 T 11-10-2018 ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 PIRSF PIRSF037260 1 90 1.4E-36 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 3 89 3.0E-24 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 Pfam PF05256 Uncharacterised protein family (UPF0223) 2 84 9.9E-36 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 Hamap MF_01041 UPF0223 protein . 1 89 24.885 T 11-10-2018 IPR007920 Protein of unknown function UPF0223 ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 SUPERFAMILY SSF158504 4 84 4.97E-32 T 11-10-2018 IPR023324 BH2638-like superfamily ABE28_007190 f4767f7c3060870d17b905b9c832f30a 90 Gene3D G3DSA:1.10.220.80 12 89 4.2E-28 T 11-10-2018 IPR023324 BH2638-like superfamily ABE28_011440 5637736fafb09664ef25d548e43003b3 155 SUPERFAMILY SSF109854 5 152 1.81E-22 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_011440 5637736fafb09664ef25d548e43003b3 155 Pfam PF05163 DinB family 7 151 7.5E-13 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB ABE28_011440 5637736fafb09664ef25d548e43003b3 155 Gene3D G3DSA:1.20.120.450 4 152 2.6E-25 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017470 108ecf21dd5a07559a2fd0dceddaee33 284 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 3 276 8.6E-116 T 11-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 ABE28_017470 108ecf21dd5a07559a2fd0dceddaee33 284 Pfam PF01063 Amino-transferase class IV 30 249 5.2E-45 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABE28_017470 108ecf21dd5a07559a2fd0dceddaee33 284 Gene3D G3DSA:3.30.470.10 1 119 1.8E-34 T 11-10-2018 ABE28_017470 108ecf21dd5a07559a2fd0dceddaee33 284 SUPERFAMILY SSF56752 3 276 4.32E-79 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABE28_017470 108ecf21dd5a07559a2fd0dceddaee33 284 Gene3D G3DSA:3.20.10.10 120 282 9.5E-56 T 11-10-2018 ABE28_009790 48ae45c03022d01e9348e7c456c7067f 212 Pfam PF02525 Flavodoxin-like fold 3 207 1.5E-43 T 11-10-2018 IPR003680 Flavodoxin-like fold ABE28_009790 48ae45c03022d01e9348e7c456c7067f 212 Gene3D G3DSA:3.40.50.360 1 212 2.1E-60 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_009790 48ae45c03022d01e9348e7c456c7067f 212 SUPERFAMILY SSF52218 1 212 8.38E-50 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_009790 48ae45c03022d01e9348e7c456c7067f 212 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 212 27.993 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ABE28_002785 504e5bfbfeae6f5250cb521121c9be53 333 Gene3D G3DSA:3.20.20.70 20 255 2.0E-61 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_002785 504e5bfbfeae6f5250cb521121c9be53 333 SUPERFAMILY SSF51395 20 324 2.43E-59 T 11-10-2018 ABE28_002785 504e5bfbfeae6f5250cb521121c9be53 333 PIRSF PIRSF006621 8 331 1.3E-81 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_002785 504e5bfbfeae6f5250cb521121c9be53 333 Pfam PF01207 Dihydrouridine synthase (Dus) 22 324 3.4E-49 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_002785 504e5bfbfeae6f5250cb521121c9be53 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 106 124 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 ABE28_016670 4487328e552226faad23a380bfd9fcfb 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 5 202 8.5E-53 T 11-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit ABE28_016670 4487328e552226faad23a380bfd9fcfb 202 Gene3D G3DSA:1.20.1300.10 2 202 2.6E-46 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016670 4487328e552226faad23a380bfd9fcfb 202 SUPERFAMILY SSF81343 4 201 1.03E-59 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016670 4487328e552226faad23a380bfd9fcfb 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 191 3.3E-13 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016670 4487328e552226faad23a380bfd9fcfb 202 PIRSF PIRSF000170 1 202 6.0E-93 T 11-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute ABE28_013945 eae933cf9ea995c541a244020934e57d 199 Gene3D G3DSA:3.40.50.2020 3 188 4.1E-53 T 11-10-2018 ABE28_013945 eae933cf9ea995c541a244020934e57d 199 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 191 5.2E-81 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 ABE28_013945 eae933cf9ea995c541a244020934e57d 199 SUPERFAMILY SSF53271 1 181 1.42E-45 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_013945 eae933cf9ea995c541a244020934e57d 199 Pfam PF00156 Phosphoribosyl transferase domain 32 156 4.6E-11 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_013945 eae933cf9ea995c541a244020934e57d 199 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.223 T 11-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 ABE28_019420 00ac25bdc05b387bd3c881be8cc442d3 415 SUPERFAMILY SSF51338 32 76 2.87E-5 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019420 00ac25bdc05b387bd3c881be8cc442d3 415 Gene3D G3DSA:3.20.20.140 69 363 4.7E-104 T 11-10-2018 ABE28_019420 00ac25bdc05b387bd3c881be8cc442d3 415 SUPERFAMILY SSF51556 69 374 1.83E-68 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_019420 00ac25bdc05b387bd3c881be8cc442d3 415 Pfam PF07969 Amidohydrolase family 119 403 6.4E-17 T 11-10-2018 IPR013108 Amidohydrolase 3 ABE28_019420 00ac25bdc05b387bd3c881be8cc442d3 415 Gene3D G3DSA:2.30.40.10 31 403 4.7E-104 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 9 306 5.3E-129 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 SUPERFAMILY SSF52540 5 306 1.54E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 PIRSF PIRSF000545 1 307 1.2E-141 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 Gene3D G3DSA:3.40.50.300 1 307 1.5E-92 T 11-10-2018 ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 85 223 4.1E-16 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ABE28_008395 ece097fe89315c528650dc8bf99fc08d 307 Hamap MF_00215 Pantothenate kinase [coaA]. 1 307 157.013 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 SMART SM00788 3 422 1.8E-288 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 209.682 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 Gene3D G3DSA:3.90.170.10 265 429 1.4E-69 T 11-10-2018 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 Gene3D G3DSA:1.10.300.10 100 199 2.7E-105 T 11-10-2018 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 Gene3D G3DSA:3.40.440.10 5 252 2.7E-105 T 11-10-2018 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 SUPERFAMILY SSF52540 1 427 6.16E-175 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 3.3E-184 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_023695 d499598c6055293ba36f1b147d8f0d36 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 4.0E-192 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 SUPERFAMILY SSF56059 91 296 1.59E-41 T 11-10-2018 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 Pfam PF08443 RimK-like ATP-grasp domain 100 292 1.0E-44 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 30 293 3.9E-64 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 Gene3D G3DSA:3.30.1490.20 131 189 5.7E-6 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 Gene3D G3DSA:3.30.470.80 190 297 2.2E-35 T 11-10-2018 ABE28_016415 e9e0b9a30d116af6f5ce44508a194f61 313 Gene3D G3DSA:3.40.50.20 16 115 1.1E-16 T 11-10-2018 ABE28_004085 f090edb28f81cd476686f217b0d8dfa2 421 Pfam PF05977 Transmembrane secretion effector 4 420 1.7E-30 T 11-10-2018 IPR010290 Transmembrane secretion effector ABE28_004085 f090edb28f81cd476686f217b0d8dfa2 421 SUPERFAMILY SSF103473 12 410 8.63E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_004085 f090edb28f81cd476686f217b0d8dfa2 421 Gene3D G3DSA:1.20.1250.20 8 406 1.2E-42 T 11-10-2018 ABE28_012795 3f86f185f8634767a5b58fa6523f5abf 387 Gene3D G3DSA:1.20.1250.20 185 385 3.5E-36 T 11-10-2018 ABE28_012795 3f86f185f8634767a5b58fa6523f5abf 387 Pfam PF12832 MFS_1 like family 2 354 2.0E-45 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain ABE28_012795 3f86f185f8634767a5b58fa6523f5abf 387 SUPERFAMILY SSF103473 3 378 4.05E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_012795 3f86f185f8634767a5b58fa6523f5abf 387 PIRSF PIRSF004925 1 384 4.3E-63 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter ABE28_012795 3f86f185f8634767a5b58fa6523f5abf 387 Gene3D G3DSA:1.20.1250.20 1 183 4.2E-28 T 11-10-2018 ABE28_006190 5b8f6dd0a020e2fca824465306d50a99 192 Pfam PF01928 CYTH domain 5 186 4.1E-31 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ABE28_006190 5b8f6dd0a020e2fca824465306d50a99 192 Gene3D G3DSA:2.40.320.10 1 191 9.8E-57 T 11-10-2018 ABE28_006190 5b8f6dd0a020e2fca824465306d50a99 192 PIRSF PIRSF012526 1 192 5.3E-69 T 11-10-2018 IPR009195 Uncharacterised protein family YjbK ABE28_006190 5b8f6dd0a020e2fca824465306d50a99 192 SMART SM01118 4 192 1.6E-21 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 ABE28_006190 5b8f6dd0a020e2fca824465306d50a99 192 SUPERFAMILY SSF55154 4 189 7.19E-33 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 SUPERFAMILY SSF52402 231 575 9.02E-73 T 11-10-2018 ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 534 1.2E-165 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 Gene3D G3DSA:3.60.20.10 2 184 7.0E-63 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 Pfam PF00733 Asparagine synthase 242 587 2.0E-93 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 PIRSF PIRSF001589 1 609 1.1E-145 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 Pfam PF13537 Glutamine amidotransferase domain 48 169 2.1E-46 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain ABE28_005925 1bae61b0df6f85182c44214c447c9702 615 SUPERFAMILY SSF56235 1 226 6.95E-65 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_022225 e0c94ce35a38b975a03d94e2e162ed60 244 SUPERFAMILY SSF51366 5 240 6.53E-68 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_022225 e0c94ce35a38b975a03d94e2e162ed60 244 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 35.206 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABE28_022225 e0c94ce35a38b975a03d94e2e162ed60 244 Pfam PF00977 Histidine biosynthesis protein 6 234 5.7E-73 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABE28_022225 e0c94ce35a38b975a03d94e2e162ed60 244 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 237 5.5E-78 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 ABE28_022225 e0c94ce35a38b975a03d94e2e162ed60 244 Gene3D G3DSA:3.20.20.70 1 243 1.3E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_003755 9cce33cd38818595ca3360f867599b28 329 SUPERFAMILY SSF53850 39 270 8.08E-46 T 11-10-2018 ABE28_003755 9cce33cd38818595ca3360f867599b28 329 SMART SM00062 39 270 1.7E-9 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003755 9cce33cd38818595ca3360f867599b28 329 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 47 323 4.3E-67 T 11-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 ABE28_003755 9cce33cd38818595ca3360f867599b28 329 Gene3D G3DSA:3.40.190.10 48 313 1.3E-76 T 11-10-2018 ABE28_003755 9cce33cd38818595ca3360f867599b28 329 Gene3D G3DSA:3.40.190.10 120 219 1.3E-76 T 11-10-2018 ABE28_003755 9cce33cd38818595ca3360f867599b28 329 Pfam PF09084 NMT1/THI5 like 47 259 3.5E-23 T 11-10-2018 IPR015168 SsuA/THI5-like ABE28_014430 8bf27ed3c8ddf8e9523ae94ea76ebf43 261 SMART SM00257 212 258 9.1E-9 T 11-10-2018 IPR018392 LysM domain ABE28_014430 8bf27ed3c8ddf8e9523ae94ea76ebf43 261 SUPERFAMILY SSF54106 211 258 3.79E-7 T 11-10-2018 ABE28_014430 8bf27ed3c8ddf8e9523ae94ea76ebf43 261 Pfam PF01476 LysM domain 213 258 2.2E-7 T 11-10-2018 IPR018392 LysM domain ABE28_014430 8bf27ed3c8ddf8e9523ae94ea76ebf43 261 Gene3D G3DSA:3.10.350.10 196 261 6.3E-11 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_005125 e88ddceb096e2a97813162dd71c71e30 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 255 1.8E-60 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_005125 e88ddceb096e2a97813162dd71c71e30 257 SUPERFAMILY SSF52096 1 254 2.13E-81 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_005125 e88ddceb096e2a97813162dd71c71e30 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_005125 e88ddceb096e2a97813162dd71c71e30 257 Gene3D G3DSA:1.10.12.10 200 256 3.5E-21 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal ABE28_005125 e88ddceb096e2a97813162dd71c71e30 257 Gene3D G3DSA:3.90.226.10 1 199 3.9E-70 T 11-10-2018 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 Gene3D G3DSA:3.20.20.80 1 478 2.6E-184 T 11-10-2018 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 Pfam PF00232 Glycosyl hydrolase family 1 7 475 3.1E-176 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 4.7E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 4.7E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 4.7E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 4.7E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 4.7E-18 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site ABE28_011600 b6f355c61e48d8ffd8ba9b0dfad17f14 489 SUPERFAMILY SSF51445 8 476 2.73E-170 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_004315 f4742da542c5f3f518cd8c4b44b066fc 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 46 1.8E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_004315 f4742da542c5f3f518cd8c4b44b066fc 207 Gene3D G3DSA:1.10.357.10 1 171 9.5E-19 T 11-10-2018 ABE28_004315 f4742da542c5f3f518cd8c4b44b066fc 207 SUPERFAMILY SSF46689 3 59 8.72E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 10 430 1.4E-158 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 SUPERFAMILY SSF50621 277 431 1.13E-53 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 1.7E-16 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 41 296 3.0E-72 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 Gene3D G3DSA:2.40.37.10 17 427 2.0E-157 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 SUPERFAMILY SSF51419 30 299 7.56E-78 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 234 250 - T 11-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 1.7E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 1.7E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 1.7E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 1.7E-31 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 4.4E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 4.4E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 4.4E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 4.4E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 4.4E-18 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 Gene3D G3DSA:3.20.20.10 38 297 2.0E-157 T 11-10-2018 IPR029066 PLP-binding barrel ABE28_014570 7ce03308126c67c88dcb20c0ccf01382 442 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 41.371 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_013650 77da313612eaf52c7c5c6afdb91983ab 249 PIRSF PIRSF005426 1 248 1.3E-80 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 ABE28_013650 77da313612eaf52c7c5c6afdb91983ab 249 SUPERFAMILY SSF55469 1 246 2.88E-62 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_013650 77da313612eaf52c7c5c6afdb91983ab 249 Pfam PF00881 Nitroreductase family 8 164 2.8E-21 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_013650 77da313612eaf52c7c5c6afdb91983ab 249 Gene3D G3DSA:3.40.109.10 1 248 8.1E-68 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 49.88 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 1.8E-116 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 Gene3D G3DSA:3.30.930.10 8 344 1.8E-128 T 11-10-2018 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 3.9E-110 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 21 88 1.3E-25 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 SUPERFAMILY SSF46589 13 100 2.14E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 ABE28_016755 15f24d9f7209e177f49ddb39c1ff54c7 346 SUPERFAMILY SSF55681 93 342 1.65E-84 T 11-10-2018 ABE28_021930 eec35bbb6b8a8d683cad0ab87d7b2b53 655 Pfam PF00884 Sulfatase 253 545 3.2E-38 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 ABE28_021930 eec35bbb6b8a8d683cad0ab87d7b2b53 655 SUPERFAMILY SSF53649 251 643 6.21E-77 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_021930 eec35bbb6b8a8d683cad0ab87d7b2b53 655 PIRSF PIRSF005091 1 629 3.1E-192 T 11-10-2018 IPR012160 Lipoteichoic acid synthase-like ABE28_021930 eec35bbb6b8a8d683cad0ab87d7b2b53 655 Gene3D G3DSA:3.40.720.10 245 555 3.6E-77 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 ABE28_018135 524b237cc4e418f00987f5df6faee550 157 Pfam PF10901 Protein of unknown function (DUF2690) 37 143 1.7E-30 T 11-10-2018 IPR021224 Protein of unknown function DUF2690 ABE28_003910 e5ce07de87e2399ff1a1c1ddf5a154a2 467 Pfam PF02614 Glucuronate isomerase 1 464 1.5E-206 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 ABE28_003910 e5ce07de87e2399ff1a1c1ddf5a154a2 467 Hamap MF_00675 Uronate isomerase [uxaC]. 2 466 46.673 T 11-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 ABE28_003910 e5ce07de87e2399ff1a1c1ddf5a154a2 467 Gene3D G3DSA:1.10.2020.10 46 136 5.3E-191 T 11-10-2018 ABE28_003910 e5ce07de87e2399ff1a1c1ddf5a154a2 467 Gene3D G3DSA:3.20.20.140 7 464 5.3E-191 T 11-10-2018 ABE28_003910 e5ce07de87e2399ff1a1c1ddf5a154a2 467 SUPERFAMILY SSF51556 2 464 1.08E-169 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 SUPERFAMILY SSF88723 21 173 3.08E-46 T 11-10-2018 IPR029060 PIN-like domain superfamily ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 SMART SM00475 19 281 2.2E-114 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 Gene3D G3DSA:3.40.50.1010 23 296 9.1E-87 T 11-10-2018 ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 SMART SM00279 193 228 1.8E-15 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 191 281 8.9E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 SUPERFAMILY SSF47807 191 302 2.39E-30 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 22 171 6.0E-52 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 ABE28_013905 03a116f64528ec2c56b436a4fa6efa8c 303 Gene3D G3DSA:1.10.150.20 194 266 9.1E-87 T 11-10-2018 ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 88 99 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 7 122 4.6E-35 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 Pfam PF12838 4Fe-4S dicluster domain 45 102 2.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 131 22.809 T 11-10-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 SUPERFAMILY SSF54862 24 126 3.22E-25 T 11-10-2018 ABE28_022795 b8bfb7d8795ae46fab359e81e01baf38 139 Gene3D G3DSA:3.30.70.3270 24 139 3.1E-32 T 11-10-2018 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 SUPERFAMILY SSF51338 1 433 1.54E-28 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 Gene3D G3DSA:2.30.40.10 11 427 6.1E-144 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 Gene3D G3DSA:3.20.20.140 60 353 6.1E-144 T 11-10-2018 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 Pfam PF01979 Amidohydrolase family 56 409 6.0E-71 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 435 42.176 T 11-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 ABE28_019180 8374f01428f1b7b32d780b9284e9d76e 436 SUPERFAMILY SSF51556 59 358 7.49E-92 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Gene3D G3DSA:2.170.120.30 40 143 2.9E-25 T 11-10-2018 ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Gene3D G3DSA:2.170.120.40 144 231 3.6E-8 T 11-10-2018 ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Gene3D G3DSA:2.170.120.40 234 326 3.9E-17 T 11-10-2018 ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Pfam PF07949 YbbR-like protein 53 135 3.0E-10 T 11-10-2018 IPR012505 YbbR-like ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Pfam PF07949 YbbR-like protein 144 227 1.6E-11 T 11-10-2018 IPR012505 YbbR-like ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Pfam PF07949 YbbR-like protein 237 314 8.8E-11 T 11-10-2018 IPR012505 YbbR-like ABE28_000890 f2749de2021f927cd81f4137d5e94ccb 450 Gene3D G3DSA:2.170.120.30 359 449 2.4E-16 T 11-10-2018 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 131 181 1.3E-6 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 SUPERFAMILY SSF51998 131 831 1.98E-145 T 11-10-2018 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 263 282 9.9E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 574 597 9.9E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 639 666 9.9E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 546 568 9.9E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 PRINTS PR01183 Ribonucleotide reductase large chain signature 508 531 9.9E-37 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 Pfam PF02867 Ribonucleotide reductase, barrel domain 188 767 2.8E-123 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 Gene3D G3DSA:3.20.70.20 115 337 1.8E-42 T 11-10-2018 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 Gene3D G3DSA:3.20.70.20 359 782 3.0E-120 T 11-10-2018 ABE28_015055 c03e5ca3032e3a6eaebd3496ebe840c0 856 TIGRFAM TIGR02504 NrdJ_Z: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent 130 777 4.5E-180 T 11-10-2018 IPR013344 Ribonucleotide reductase, adenosylcobalamin-dependent GO:0000166|GO:0004748|GO:0031419|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 Gene3D G3DSA:1.10.10.60 213 271 8.5E-13 T 11-10-2018 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 Gene3D G3DSA:1.10.10.60 272 327 1.7E-15 T 11-10-2018 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 SMART SM00342 239 323 4.4E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 SUPERFAMILY SSF46689 276 326 8.51E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 SUPERFAMILY SSF46689 228 272 3.32E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 Pfam PF12833 Helix-turn-helix domain 245 324 1.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 323 1.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 292 307 1.0E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 SUPERFAMILY SSF51215 60 133 5.89E-14 T 11-10-2018 IPR037923 Transcription regulator HTH-like ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 Gene3D G3DSA:2.60.120.10 50 118 9.0E-8 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_003920 c3267f0b3d11ef242490afa3e8c49899 332 Pfam PF02311 AraC-like ligand binding domain 60 134 1.1E-11 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Pfam PF01709 Transcriptional regulator 4 235 6.3E-82 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Gene3D G3DSA:3.30.70.980 83 234 4.8E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 5.1E-71 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Gene3D G3DSA:3.30.70.980 131 201 4.8E-45 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.513 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 SUPERFAMILY SSF75625 1 236 2.22E-79 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Gene3D G3DSA:1.10.10.200 2 79 1.8E-24 T 11-10-2018 IPR017856 Integrase-like, N-terminal ABE28_020510 15303a809c7f881b7154f26f98ccd64e 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.534 T 11-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN ABE28_019290 79b953b747df07dd043be23b1c039a4b 51 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 47 4.1E-15 T 11-10-2018 IPR011437 Domain of unknown function DUF1540 ABE28_020220 f45b1c2a95d0e6afe4b4508be362a0f1 213 Gene3D G3DSA:3.40.50.720 1 211 3.8E-56 T 11-10-2018 ABE28_020220 f45b1c2a95d0e6afe4b4508be362a0f1 213 Pfam PF13460 NAD(P)H-binding 7 195 3.3E-25 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_020220 f45b1c2a95d0e6afe4b4508be362a0f1 213 SUPERFAMILY SSF51735 1 211 6.16E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018825 4f35d2fa352dcb9dd6d3de97fe33d5f1 220 SUPERFAMILY SSF161098 11 206 5.36E-36 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018825 4f35d2fa352dcb9dd6d3de97fe33d5f1 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 51 220 5.8E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_018825 4f35d2fa352dcb9dd6d3de97fe33d5f1 220 Gene3D G3DSA:1.10.3720.10 8 220 3.8E-39 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_020185 f0c8cf70d2dba550dcfc59ca83ca22dc 277 SUPERFAMILY SSF52091 166 275 4.91E-14 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_020185 f0c8cf70d2dba550dcfc59ca83ca22dc 277 Gene3D G3DSA:3.30.750.24 163 277 2.3E-29 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_020185 f0c8cf70d2dba550dcfc59ca83ca22dc 277 Pfam PF01740 STAS domain 175 272 8.4E-12 T 11-10-2018 IPR002645 STAS domain ABE28_014585 95152cefd1a4deddcb7b481d9d943991 140 Pfam PF13782 Stage V sporulation protein AB 27 135 1.0E-34 T 11-10-2018 IPR020144 Stage V sporulation protein AB ABE28_014585 95152cefd1a4deddcb7b481d9d943991 140 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 27 138 9.0E-34 T 11-10-2018 IPR020144 Stage V sporulation protein AB ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 Gene3D G3DSA:2.40.50.140 1 66 6.7E-31 T 11-10-2018 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 PIRSF PIRSF002599 1 66 4.2E-26 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 SUPERFAMILY SSF50249 1 64 1.1E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 24 33 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 39 57 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 PRINTS PR00050 Cold shock protein signature 4 19 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 8.2E-32 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_012295 8fa187ad6ba0d42503c2d847f1a5e74b 66 SMART SM00357 3 66 6.9E-33 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_008075 c932e3b84d88bc552f4fd5eeadbdf31b 212 SUPERFAMILY SSF103039 5 207 3.66E-49 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008075 c932e3b84d88bc552f4fd5eeadbdf31b 212 Gene3D G3DSA:3.40.1550.10 5 209 9.0E-56 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008075 c932e3b84d88bc552f4fd5eeadbdf31b 212 Pfam PF04509 CheC-like family 11 44 4.9E-15 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 ABE28_008075 c932e3b84d88bc552f4fd5eeadbdf31b 212 Pfam PF04509 CheC-like family 112 148 5.1E-10 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 ABE28_006955 b3915d34285889f2df967e131795c076 164 SUPERFAMILY SSF88659 107 160 2.8E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_006955 b3915d34285889f2df967e131795c076 164 Pfam PF04542 Sigma-70 region 2 10 73 2.1E-7 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_006955 b3915d34285889f2df967e131795c076 164 Pfam PF04545 Sigma-70, region 4 111 157 8.3E-7 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 ABE28_006955 b3915d34285889f2df967e131795c076 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 159 3.6E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_006955 b3915d34285889f2df967e131795c076 164 SUPERFAMILY SSF88946 5 72 1.57E-9 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_006955 b3915d34285889f2df967e131795c076 164 Gene3D G3DSA:1.10.10.10 70 161 6.3E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006955 b3915d34285889f2df967e131795c076 164 Gene3D G3DSA:1.10.1740.10 2 69 8.9E-6 T 11-10-2018 ABE28_019500 bb94acbb044cb5028c9edc75e10aabba 344 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 8 332 6.5E-119 T 11-10-2018 IPR014225 Sporulation stage II, protein D firmicutes ABE28_019500 bb94acbb044cb5028c9edc75e10aabba 344 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 71 331 3.2E-69 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 ABE28_019500 bb94acbb044cb5028c9edc75e10aabba 344 Pfam PF08486 Stage II sporulation protein 68 172 7.9E-23 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_015005 53f510bf522aab9e78f5eb952406b47e 310 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 285 8.5E-114 T 11-10-2018 IPR014217 Sporulation stage III, protein AA ABE28_015005 53f510bf522aab9e78f5eb952406b47e 310 SMART SM00382 135 279 1.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_015005 53f510bf522aab9e78f5eb952406b47e 310 Gene3D G3DSA:3.40.50.300 117 282 2.9E-23 T 11-10-2018 ABE28_015005 53f510bf522aab9e78f5eb952406b47e 310 SUPERFAMILY SSF52540 35 261 1.19E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021160 20dc5e46ad25830307a31d3de160aa55 214 Gene3D G3DSA:2.60.40.1240 78 211 2.4E-8 T 11-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily ABE28_021160 20dc5e46ad25830307a31d3de160aa55 214 Pfam PF11611 Domain of unknown function (DUF4352) 78 186 2.0E-7 T 11-10-2018 IPR029051 Domain of unknown function DUF4352 ABE28_015070 f31eab59069cbcbb028e7a110fe2f6f6 485 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 59.725 T 11-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 ABE28_015070 f31eab59069cbcbb028e7a110fe2f6f6 485 SUPERFAMILY SSF53383 22 483 1.75E-115 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_015070 f31eab59069cbcbb028e7a110fe2f6f6 485 Gene3D G3DSA:3.40.640.10 86 327 3.0E-60 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_015070 f31eab59069cbcbb028e7a110fe2f6f6 485 Gene3D G3DSA:3.90.1150.10 338 470 4.4E-48 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_015070 f31eab59069cbcbb028e7a110fe2f6f6 485 Pfam PF02347 Glycine cleavage system P-protein 44 309 6.3E-12 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 ABE28_003965 9a3ec84436d9b5e7c2c416bc408d80d7 368 Pfam PF03845 Spore germination protein 5 316 7.5E-59 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_003965 9a3ec84436d9b5e7c2c416bc408d80d7 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 361 1.3E-67 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 TIGRFAM TIGR04181 NHT_00031: aminotransferase, LLPSF_NHT_00031 family 6 370 1.0E-140 T 11-10-2018 IPR026385 Aminotransferase, LLPSF_NHT_00031 family ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 PIRSF PIRSF000390 1 392 3.4E-95 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 Gene3D G3DSA:3.40.640.10 1 265 9.1E-85 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 SUPERFAMILY SSF53383 5 388 2.86E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 385 1.5E-92 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase ABE28_016020 91cc7c3a193b1eff3ee69be9c81aa210 397 Gene3D G3DSA:3.90.1150.10 266 388 3.0E-20 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_022740 42a32725c66e359dc516c6a4b7f9c051 299 Pfam PF01551 Peptidase family M23 115 213 1.6E-22 T 11-10-2018 IPR016047 Peptidase M23 ABE28_022740 42a32725c66e359dc516c6a4b7f9c051 299 SUPERFAMILY SSF51261 99 216 1.78E-24 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_022740 42a32725c66e359dc516c6a4b7f9c051 299 Gene3D G3DSA:2.70.70.10 72 229 6.1E-46 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_023085 4fabae6d585d3c7e06c3f82017a21b28 435 Gene3D G3DSA:1.20.1250.30 235 413 4.8E-168 T 11-10-2018 ABE28_023085 4fabae6d585d3c7e06c3f82017a21b28 435 Gene3D G3DSA:1.10.3210.10 11 402 4.8E-168 T 11-10-2018 ABE28_023085 4fabae6d585d3c7e06c3f82017a21b28 435 SMART SM00471 57 187 6.8E-11 T 11-10-2018 IPR003607 HD/PDEase domain ABE28_023085 4fabae6d585d3c7e06c3f82017a21b28 435 SUPERFAMILY SSF109604 7 415 1.01E-121 T 11-10-2018 ABE28_023085 4fabae6d585d3c7e06c3f82017a21b28 435 Pfam PF01966 HD domain 61 181 3.6E-16 T 11-10-2018 IPR006674 HD domain ABE28_022575 c29687144b9ec60366c984c4ed43f080 308 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 228 1.0E-49 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_022575 c29687144b9ec60366c984c4ed43f080 308 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 6.7E-49 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_022575 c29687144b9ec60366c984c4ed43f080 308 Gene3D G3DSA:1.10.260.150 49 308 4.8E-89 T 11-10-2018 ABE28_022575 c29687144b9ec60366c984c4ed43f080 308 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 11 308 45.097 T 11-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU ABE28_017660 593b05d33a032be8cec9706459960d63 74 SUPERFAMILY SSF57884 1 34 2.22E-7 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_017660 593b05d33a032be8cec9706459960d63 74 Gene3D G3DSA:3.40.10.10 1 25 1.4E-6 T 11-10-2018 IPR035451 Ada-like domain superfamily ABE28_017660 593b05d33a032be8cec9706459960d63 74 Pfam PF02805 Metal binding domain of Ada 1 24 4.6E-7 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 ABE28_017660 593b05d33a032be8cec9706459960d63 74 Gene3D G3DSA:1.10.10.60 30 73 2.3E-5 T 11-10-2018 ABE28_017170 7e677ae57ff52944d60944ffd74fffbe 266 Gene3D G3DSA:3.40.50.10330 31 266 1.6E-73 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_017170 7e677ae57ff52944d60944ffd74fffbe 266 Pfam PF01513 ATP-NAD kinase 31 251 4.1E-19 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_017170 7e677ae57ff52944d60944ffd74fffbe 266 Hamap MF_00361 NAD kinase [nadK]. 4 266 20.16 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_017170 7e677ae57ff52944d60944ffd74fffbe 266 Gene3D G3DSA:2.60.200.30 108 244 1.6E-73 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_017170 7e677ae57ff52944d60944ffd74fffbe 266 SUPERFAMILY SSF111331 10 265 1.19E-55 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_007705 6339126d09e4701f5da2f27259dab011 450 Pfam PF01029 NusB family 8 130 1.0E-28 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 ABE28_007705 6339126d09e4701f5da2f27259dab011 450 Gene3D G3DSA:3.40.50.150 147 447 3.1E-81 T 11-10-2018 ABE28_007705 6339126d09e4701f5da2f27259dab011 450 SUPERFAMILY SSF53335 140 448 5.37E-69 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 Gene3D G3DSA:1.10.940.10 2 145 6.4E-39 T 11-10-2018 IPR035926 NusB-like superfamily ABE28_007705 6339126d09e4701f5da2f27259dab011 450 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 9 448 2.3E-146 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 ABE28_007705 6339126d09e4701f5da2f27259dab011 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 248 446 7.4E-60 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 ABE28_007705 6339126d09e4701f5da2f27259dab011 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 376 392 2.0E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 430 447 2.0E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 229 243 2.0E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 258 268 2.0E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 326 338 2.0E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase ABE28_007705 6339126d09e4701f5da2f27259dab011 450 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 325 336 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 ABE28_007705 6339126d09e4701f5da2f27259dab011 450 SUPERFAMILY SSF48013 4 132 2.75E-34 T 11-10-2018 IPR035926 NusB-like superfamily ABE28_004460 90d625d0fce94c20544926baff297c6a 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 3 483 69.293 T 11-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 Gene3D G3DSA:3.40.309.10 254 452 4.2E-145 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 483 5.2E-178 T 11-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 SUPERFAMILY SSF53720 4 483 4.71E-142 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 Gene3D G3DSA:3.40.605.10 25 460 4.2E-145 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_004460 90d625d0fce94c20544926baff297c6a 484 Pfam PF00171 Aldehyde dehydrogenase family 17 479 6.4E-143 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_017985 266cbde16081f7b15381f128fded580c 397 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 224 261 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_017985 266cbde16081f7b15381f128fded580c 397 Pfam PF00202 Aminotransferase class-III 16 396 1.0E-127 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_017985 266cbde16081f7b15381f128fded580c 397 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 5 396 1.2E-161 T 11-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 ABE28_017985 266cbde16081f7b15381f128fded580c 397 SUPERFAMILY SSF53383 3 396 1.73E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_017985 266cbde16081f7b15381f128fded580c 397 PIRSF PIRSF000521 176 397 1.9E-30 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_017985 266cbde16081f7b15381f128fded580c 397 PIRSF PIRSF000521 3 160 4.2E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_017985 266cbde16081f7b15381f128fded580c 397 Gene3D G3DSA:3.90.1150.10 24 386 3.0E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_017985 266cbde16081f7b15381f128fded580c 397 Gene3D G3DSA:3.40.640.10 59 307 3.0E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_017985 266cbde16081f7b15381f128fded580c 397 Hamap MF_01689 Ornithine aminotransferase [rocD]. 5 397 65.822 T 11-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 ABE28_005450 5509d3d439e2d91cd06740ad2b5dc737 556 Pfam PF03109 ABC1 family 112 230 1.0E-33 T 11-10-2018 IPR004147 UbiB domain ABE28_005450 5509d3d439e2d91cd06740ad2b5dc737 556 SUPERFAMILY SSF56112 94 428 3.26E-26 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_011025 b231a1ed8b192ddada3883cba932ed26 276 Pfam PF02540 NAD synthase 24 266 1.2E-65 T 11-10-2018 IPR022310 NAD/GMP synthase ABE28_011025 b231a1ed8b192ddada3883cba932ed26 276 SUPERFAMILY SSF52402 5 275 7.91E-79 T 11-10-2018 ABE28_011025 b231a1ed8b192ddada3883cba932ed26 276 TIGRFAM TIGR00552 nadE: NAD+ synthetase 28 276 4.7E-70 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 ABE28_011025 b231a1ed8b192ddada3883cba932ed26 276 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 19 270 45.59 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 ABE28_011025 b231a1ed8b192ddada3883cba932ed26 276 Gene3D G3DSA:3.40.50.620 3 276 1.3E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_011575 a1e65d2a40860e9a87b37f3ac8d77633 111 PIRSF PIRSF000699 1 106 8.6E-36 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_011575 a1e65d2a40860e9a87b37f3ac8d77633 111 Gene3D G3DSA:1.20.58.280 1 105 2.1E-35 T 11-10-2018 ABE28_011575 a1e65d2a40860e9a87b37f3ac8d77633 111 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 2.6E-34 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_011575 a1e65d2a40860e9a87b37f3ac8d77633 111 SUPERFAMILY SSF46973 1 99 3.14E-33 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 ABE28_002995 7f29d8a61d699dae33b23ad7eb0a3795 92 SUPERFAMILY SSF52833 4 87 1.6E-14 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_002995 7f29d8a61d699dae33b23ad7eb0a3795 92 Gene3D G3DSA:3.40.30.10 4 89 5.8E-17 T 11-10-2018 ABE28_002995 7f29d8a61d699dae33b23ad7eb0a3795 92 Pfam PF00462 Glutaredoxin 7 62 8.3E-14 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 Pfam PF02629 CoA binding domain 84 180 1.8E-27 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 8.1E-20 T 11-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 SMART SM00881 81 182 6.3E-21 T 11-10-2018 IPR003781 CoA-binding GO:0048037 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 Gene3D G3DSA:1.10.10.10 1 82 6.0E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 Gene3D G3DSA:3.40.50.720 83 217 9.3E-46 T 11-10-2018 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 SUPERFAMILY SSF46785 9 80 5.9E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 211 38.644 T 11-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 ABE28_001555 c9a9bdb9df45a02095c1cec50491a2ce 220 SUPERFAMILY SSF51735 84 209 5.42E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 SUPERFAMILY SSF51735 6 251 4.78E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 7.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 7.9E-14 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 Gene3D G3DSA:3.40.50.720 1 261 2.0E-85 T 11-10-2018 ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.6E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003035 e0140e028fce99437c2dbcd1eb8e7c07 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 4.3E-68 T 11-10-2018 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 Pfam PF12833 Helix-turn-helix domain 150 229 5.2E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 Pfam PF00072 Response regulator receiver domain 3 114 6.5E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 Gene3D G3DSA:3.40.50.2300 1 128 1.1E-29 T 11-10-2018 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 SUPERFAMILY SSF46689 180 230 5.38E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 SMART SM00448 1 114 3.9E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 SUPERFAMILY SSF46689 128 178 2.78E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 SUPERFAMILY SSF52172 1 133 3.56E-30 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_019470 6e03bf36b73be0e833470454611becc7 232 Gene3D G3DSA:1.10.10.60 177 231 9.0E-20 T 11-10-2018 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 Gene3D G3DSA:1.10.10.60 129 176 2.0E-18 T 11-10-2018 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 181 224 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 SMART SM00342 144 228 1.1E-33 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 197 212 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_019470 6e03bf36b73be0e833470454611becc7 232 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 212 228 6.2E-7 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 ABE28_002600 52c83087b91479545866399c43c26135 287 Pfam PF03631 Virulence factor BrkB 17 269 4.2E-74 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_002600 52c83087b91479545866399c43c26135 287 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 7 268 7.8E-55 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_002600 52c83087b91479545866399c43c26135 287 PIRSF PIRSF035875 1 282 1.3E-89 T 11-10-2018 IPR017039 Virulence factor BrkB ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 26.443 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 SMART SM00883 1 93 3.2E-55 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 9.5E-37 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 SUPERFAMILY SSF50129 2 93 3.48E-35 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 PRINTS PR00297 10kDa chaperonin signature 59 71 4.8E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 PRINTS PR00297 10kDa chaperonin signature 2 17 4.8E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 PRINTS PR00297 10kDa chaperonin signature 80 93 4.8E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 PRINTS PR00297 10kDa chaperonin signature 24 45 4.8E-32 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 ABE28_001570 696ff03072928cc04fd1b08c354f1719 94 Gene3D G3DSA:2.30.33.40 1 93 5.3E-38 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 ABE28_021225 748b6612b082723a9eab177a86f8f1a8 153 SUPERFAMILY SSF109854 3 137 2.56E-27 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_021225 748b6612b082723a9eab177a86f8f1a8 153 Gene3D G3DSA:1.20.120.450 1 153 7.3E-41 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_021225 748b6612b082723a9eab177a86f8f1a8 153 Pfam PF05163 DinB family 3 146 4.5E-29 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB ABE28_017305 8160742189ab1a2c5bf6c8bcd9561fb4 210 Pfam PF00583 Acetyltransferase (GNAT) family 34 118 9.8E-7 T 11-10-2018 IPR000182 GNAT domain ABE28_017305 8160742189ab1a2c5bf6c8bcd9561fb4 210 Gene3D G3DSA:3.40.630.30 1 210 1.9E-83 T 11-10-2018 ABE28_017305 8160742189ab1a2c5bf6c8bcd9561fb4 210 SUPERFAMILY SSF55729 43 122 4.56E-8 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_017305 8160742189ab1a2c5bf6c8bcd9561fb4 210 PIRSF PIRSF021278 3 210 2.6E-87 T 11-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 Pfam PF07690 Major Facilitator Superfamily 12 351 8.0E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 SUPERFAMILY SSF103473 1 388 5.23E-69 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 Gene3D G3DSA:1.20.1250.20 1 387 3.6E-69 T 11-10-2018 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 335 358 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 161 181 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 247 267 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 133 155 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 275 296 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 18 34 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010855 57ece80b4a24dba33664c0aad0bb57d1 394 PRINTS PR01035 Tetracycline resistance protein signature 75 99 2.4E-20 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_020710 1733b96f5b8bc19264b832d5b2a585bb 161 Pfam PF09084 NMT1/THI5 like 42 96 1.7E-8 T 11-10-2018 IPR015168 SsuA/THI5-like ABE28_020710 1733b96f5b8bc19264b832d5b2a585bb 161 SUPERFAMILY SSF53850 27 97 8.07E-10 T 11-10-2018 ABE28_020710 1733b96f5b8bc19264b832d5b2a585bb 161 Gene3D G3DSA:3.40.190.10 36 105 8.5E-14 T 11-10-2018 ABE28_013000 1861aec58a8d4f05a081c575453a3185 216 Pfam PF03473 MOSC domain 52 161 1.3E-19 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ABE28_013000 1861aec58a8d4f05a081c575453a3185 216 SUPERFAMILY SSF50800 5 212 8.89E-56 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_013000 1861aec58a8d4f05a081c575453a3185 216 Gene3D G3DSA:2.40.33.20 1 216 1.1E-60 T 11-10-2018 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 8.0E-55 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 3 232 14.965 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.8E-35 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_013350 1f26b3f5f8f1fde2010d761cc612cf69 248 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 1.3E-53 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 82 144 3.9E-16 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 SUPERFAMILY SSF47090 236 300 2.62E-15 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_018490 083d977f675a038a74781dad1bba8d47 302 Gene3D G3DSA:3.30.1380.10 7 144 3.5E-36 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 Gene3D G3DSA:1.10.101.10 237 302 1.5E-14 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 SUPERFAMILY SSF55166 20 150 4.97E-26 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 Gene3D G3DSA:1.10.101.10 165 236 1.4E-8 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_018490 083d977f675a038a74781dad1bba8d47 302 Pfam PF01471 Putative peptidoglycan binding domain 251 300 2.1E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_018490 083d977f675a038a74781dad1bba8d47 302 SUPERFAMILY SSF47090 164 236 3.14E-6 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_002165 eab9adeec90a504853f142fbd3432e9a 95 ProDom PD061728 YWQI YWQIA COIL COILED 4 86 4.0E-21 T 11-10-2018 IPR020299 Uncharacterised protein family YwqI ABE28_002165 eab9adeec90a504853f142fbd3432e9a 95 Pfam PF17279 Family of unknown function (DUF5344) 1 87 3.4E-21 T 11-10-2018 ABE28_003485 0892fece8b0b39e7bbdb8d9e0083c535 264 Pfam PF13349 Putative adhesin 45 262 7.9E-18 T 11-10-2018 IPR025164 Putative adhesin ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 Pfam PF02872 5'-nucleotidase, C-terminal domain 291 421 1.9E-12 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 Gene3D G3DSA:3.90.780.10 279 461 2.2E-14 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 Gene3D G3DSA:3.60.21.10 2 269 2.0E-51 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 SUPERFAMILY SSF55816 283 459 3.01E-26 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 Pfam PF00149 Calcineurin-like phosphoesterase 7 205 1.9E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PRINTS PR01607 Apyrase family signature 216 236 8.5E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PRINTS PR01607 Apyrase family signature 3 21 8.5E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PRINTS PR01607 Apyrase family signature 188 211 8.5E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PRINTS PR01607 Apyrase family signature 328 351 8.5E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PRINTS PR01607 Apyrase family signature 169 186 8.5E-17 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 SUPERFAMILY SSF56300 5 287 9.7E-60 T 11-10-2018 ABE28_021705 c54ef863317b54d577a1f94ec2c2536d 461 PIRSF PIRSF036361 1 459 4.1E-172 T 11-10-2018 IPR011240 Phosphoesterase-related protein YunD ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 SMART SM00631 25 303 5.8E-13 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 Gene3D G3DSA:3.40.630.10 19 322 5.1E-58 T 11-10-2018 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 SUPERFAMILY SSF53187 24 315 4.63E-48 T 11-10-2018 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 Pfam PF00246 Zinc carboxypeptidase 33 306 1.5E-35 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 ProSitePatterns PS00132 Zinc carboxypeptidases, zinc-binding region 1 signature. 67 89 - T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 48 60 5.2E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 164 172 5.2E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_004870 5e4ef4422dbfa09e207f42cc70a2b129 322 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 67 81 5.2E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_007330 cfd75caf21412f311a26902db9b710c1 300 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 3 282 5.9E-117 T 11-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG ABE28_007330 cfd75caf21412f311a26902db9b710c1 300 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 25 280 1.2E-58 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 PIRSF PIRSF000089 1 323 1.2E-111 T 11-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 Gene3D G3DSA:3.40.50.1220 195 325 8.6E-57 T 11-10-2018 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 SUPERFAMILY SSF52402 4 191 1.67E-47 T 11-10-2018 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 Gene3D G3DSA:3.40.50.620 2 194 1.4E-51 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 11-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 Pfam PF01012 Electron transfer flavoprotein domain 6 179 2.7E-42 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 4.8E-35 T 11-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 SMART SM00893 5 190 5.3E-41 T 11-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 ABE28_016695 9daa0e1eccc631eb2da30fc41b558aab 325 SUPERFAMILY SSF52467 198 317 3.96E-48 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_005195 a6ef78dd619baf0182d9158c1d0b0cdf 217 SUPERFAMILY SSF161098 3 215 6.15E-47 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_005195 a6ef78dd619baf0182d9158c1d0b0cdf 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 216 1.9E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_005195 a6ef78dd619baf0182d9158c1d0b0cdf 217 Gene3D G3DSA:1.10.3720.10 1 217 5.6E-51 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_005195 a6ef78dd619baf0182d9158c1d0b0cdf 217 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 216 6.2E-69 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 ABE28_022820 21299f4b6d194195ac7284a5797b713c 124 Gene3D G3DSA:1.20.58.1610 3 124 1.8E-42 T 11-10-2018 IPR038430 NADH:ubiquinone oxidoreductase, subunit 3 superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022820 21299f4b6d194195ac7284a5797b713c 124 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 7 124 19.54 T 11-10-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 ABE28_022820 21299f4b6d194195ac7284a5797b713c 124 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 26 123 6.0E-37 T 11-10-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_006415 6737039431a226af5255ef24d497e481 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 1.4E-26 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_006415 6737039431a226af5255ef24d497e481 328 Gene3D G3DSA:3.30.360.10 134 327 2.1E-62 T 11-10-2018 ABE28_006415 6737039431a226af5255ef24d497e481 328 SUPERFAMILY SSF55347 126 291 9.97E-27 T 11-10-2018 ABE28_006415 6737039431a226af5255ef24d497e481 328 SUPERFAMILY SSF51735 2 152 5.52E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006415 6737039431a226af5255ef24d497e481 328 Gene3D G3DSA:3.40.50.720 1 133 1.4E-38 T 11-10-2018 ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 Pfam PF01479 S4 domain 182 226 3.8E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 SMART SM00363 181 238 4.5E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 Gene3D G3DSA:3.30.70.330 80 166 1.5E-30 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 Gene3D G3DSA:3.30.1370.160 2 79 6.0E-31 T 11-10-2018 ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 Gene3D G3DSA:3.10.290.10 176 231 7.6E-9 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_007580 291aad4961b24e3555d775c05d8c8325 257 SUPERFAMILY SSF55174 35 251 4.0E-32 T 11-10-2018 ABE28_015995 8319e0f604fc34fa68774312efeb7808 413 Pfam PF00534 Glycosyl transferases group 1 222 372 8.6E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_015995 8319e0f604fc34fa68774312efeb7808 413 SUPERFAMILY SSF53756 96 407 2.69E-25 T 11-10-2018 ABE28_015995 8319e0f604fc34fa68774312efeb7808 413 Gene3D G3DSA:3.40.50.2000 213 378 1.4E-17 T 11-10-2018 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 Pfam PF00488 MutS domain V 326 507 6.1E-34 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 PIRSF PIRSF005814 522 633 3.1 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 PIRSF PIRSF005814 1 538 2.9E-204 T 11-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 Gene3D G3DSA:3.40.50.300 288 565 1.4E-69 T 11-10-2018 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 SUPERFAMILY SSF48334 21 285 4.58E-24 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 Gene3D G3DSA:1.10.1420.10 21 277 1.8E-8 T 11-10-2018 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 SMART SM00533 9 311 1.7E-15 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 SMART SM00534 323 508 9.3E-59 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 Gene3D G3DSA:1.10.1420.10 113 222 1.8E-8 T 11-10-2018 ABE28_019310 035f71a7d906c7914044f5f8eb57df29 634 SUPERFAMILY SSF52540 289 509 2.04E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 Pfam PF00266 Aminotransferase class-V 6 340 4.4E-47 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 SUPERFAMILY SSF53383 3 357 2.22E-116 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 187 206 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 Gene3D G3DSA:3.90.1150.10 257 359 1.2E-37 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 358 7.5E-159 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 PIRSF PIRSF000525 1 360 2.2E-155 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 Gene3D G3DSA:3.40.640.10 17 254 8.4E-92 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_005745 0333820f45b9b2d8a5d19f96c89a75e8 367 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 49.529 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 ABE28_021800 427ff053ec370e9ed778cc99f3d8408d 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 117 3.9E-33 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABE28_021800 427ff053ec370e9ed778cc99f3d8408d 118 SUPERFAMILY SSF52833 3 117 1.42E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_021800 427ff053ec370e9ed778cc99f3d8408d 118 Gene3D G3DSA:3.40.30.10 1 116 3.6E-45 T 11-10-2018 ABE28_021800 427ff053ec370e9ed778cc99f3d8408d 118 Pfam PF03960 ArsC family 6 115 2.6E-17 T 11-10-2018 IPR006660 Arsenate reductase-like ABE28_003440 16e23b85c02133143a0c6481d30a6f35 179 Gene3D G3DSA:3.40.30.10 3 172 3.1E-42 T 11-10-2018 ABE28_003440 16e23b85c02133143a0c6481d30a6f35 179 Pfam PF08534 Redoxin 24 165 8.6E-21 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 ABE28_003440 16e23b85c02133143a0c6481d30a6f35 179 SUPERFAMILY SSF52833 9 166 1.27E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_017690 d99d4c071b3b3026a55e7da3a35a132f 84 SUPERFAMILY SSF46767 1 65 9.03E-15 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 ABE28_017690 d99d4c071b3b3026a55e7da3a35a132f 84 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 1 64 1.0E-16 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 ABE28_017690 d99d4c071b3b3026a55e7da3a35a132f 84 Gene3D G3DSA:1.10.10.10 1 83 4.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016255 b802173f0ce441fd496cd0b61e1a32cb 746 SUPERFAMILY SSF54106 2 48 5.49E-11 T 11-10-2018 ABE28_016255 b802173f0ce441fd496cd0b61e1a32cb 746 SMART SM00257 3 48 1.3E-16 T 11-10-2018 IPR018392 LysM domain ABE28_016255 b802173f0ce441fd496cd0b61e1a32cb 746 Pfam PF01476 LysM domain 4 48 7.3E-14 T 11-10-2018 IPR018392 LysM domain ABE28_016255 b802173f0ce441fd496cd0b61e1a32cb 746 Gene3D G3DSA:3.10.350.10 1 54 4.7E-16 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_016255 b802173f0ce441fd496cd0b61e1a32cb 746 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 48 1.3E-25 T 11-10-2018 IPR014248 Spore coat assembly protein SafA ABE28_001615 4b9fc838d4d03c6ad32c7053d72f5af7 210 Pfam PF01965 DJ-1/PfpI family 4 176 1.5E-33 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_001615 4b9fc838d4d03c6ad32c7053d72f5af7 210 SUPERFAMILY SSF52317 4 178 6.62E-31 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_001615 4b9fc838d4d03c6ad32c7053d72f5af7 210 Gene3D G3DSA:3.40.50.880 1 210 6.0E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_022410 1835f55dff3088de7a67f49ad225aebd 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 1.4E-45 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABE28_022410 1835f55dff3088de7a67f49ad225aebd 133 Gene3D G3DSA:1.20.120.340 1 122 4.0E-44 T 11-10-2018 ABE28_022410 1835f55dff3088de7a67f49ad225aebd 133 SUPERFAMILY SSF101116 4 123 2.09E-41 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 ABE28_022410 1835f55dff3088de7a67f49ad225aebd 133 PIRSF PIRSF039090 1 129 4.8E-39 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABE28_022410 1835f55dff3088de7a67f49ad225aebd 133 Pfam PF02561 Flagellar protein FliS 7 118 2.7E-42 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 SUPERFAMILY SSF82866 828 1032 4.32E-29 T 11-10-2018 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 Pfam PF03176 MMPL family 49 362 1.0E-60 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 Pfam PF03176 MMPL family 738 1033 5.1E-41 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 SUPERFAMILY SSF58104 509 732 7.85E-6 T 11-10-2018 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 Gene3D G3DSA:1.20.1640.10 139 339 9.3E-13 T 11-10-2018 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 Gene3D G3DSA:1.10.287.950 453 603 3.3E-5 T 11-10-2018 ABE28_001095 527d8e99357792a99dba6a348eb087cd 1038 SUPERFAMILY SSF82866 151 337 6.41E-32 T 11-10-2018 ABE28_008725 dd7ccadb7d66fa0daa2c43d6890d1742 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 29.456 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABE28_008725 dd7ccadb7d66fa0daa2c43d6890d1742 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 4.5E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABE28_008725 dd7ccadb7d66fa0daa2c43d6890d1742 77 Gene3D G3DSA:2.30.30.100 1 74 1.0E-33 T 11-10-2018 ABE28_008725 dd7ccadb7d66fa0daa2c43d6890d1742 77 Pfam PF17209 Hfq protein 7 69 6.8E-32 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 ABE28_008725 dd7ccadb7d66fa0daa2c43d6890d1742 77 SUPERFAMILY SSF50182 6 64 2.86E-23 T 11-10-2018 IPR010920 LSM domain superfamily ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 Pfam PF00550 Phosphopantetheine attachment site 234 293 1.5E-9 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 Gene3D G3DSA:1.10.1200.10 229 301 3.7E-24 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 SUPERFAMILY SSF52499 1 213 3.66E-62 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 2 14 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 112 134 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 80 99 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 63 80 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 168 186 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PRINTS PR01398 Isochorismatase signature 186 203 2.5E-50 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 Pfam PF00857 Isochorismatase family 32 203 5.8E-37 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 SUPERFAMILY SSF47336 230 300 1.83E-10 T 11-10-2018 IPR036736 ACP-like superfamily ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 Gene3D G3DSA:3.40.50.850 1 211 2.3E-76 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_001165 c845e293d5b5f234eb2b4cc711581b50 304 PIRSF PIRSF001111 1 304 6.2E-132 T 11-10-2018 IPR016291 Isochorismatase GO:0008908 ABE28_009740 3a8036ef31ec389414dfce5f4001f1ae 362 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 358 3.5E-138 T 11-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic ABE28_009740 3a8036ef31ec389414dfce5f4001f1ae 362 Gene3D G3DSA:3.20.20.70 1 241 3.4E-92 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_009740 3a8036ef31ec389414dfce5f4001f1ae 362 SUPERFAMILY SSF50891 246 359 3.11E-35 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_009740 3a8036ef31ec389414dfce5f4001f1ae 362 Gene3D G3DSA:2.40.100.10 242 360 3.4E-39 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_009740 3a8036ef31ec389414dfce5f4001f1ae 362 SUPERFAMILY SSF51445 1 241 3.37E-90 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_022125 53b66981ab073d688218a36a94c440ae 431 SUPERFAMILY SSF54826 3 138 4.42E-59 T 11-10-2018 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 141 426 8.9E-141 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 Pfam PF03952 Enolase, N-terminal domain 4 134 7.7E-62 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 SMART SM01192 139 428 1.5E-224 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 Gene3D G3DSA:3.20.20.120 128 431 4.1E-137 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_022125 53b66981ab073d688218a36a94c440ae 431 SMART SM01193 4 134 1.1E-98 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PIRSF PIRSF001400 1 428 1.6E-194 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 9.3E-216 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 Gene3D G3DSA:3.30.390.10 1 127 5.8E-58 T 11-10-2018 IPR029017 Enolase-like, N-terminal ABE28_022125 53b66981ab073d688218a36a94c440ae 431 ProSitePatterns PS00164 Enolase signature. 337 350 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 SUPERFAMILY SSF51604 138 429 1.02E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_022125 53b66981ab073d688218a36a94c440ae 431 Hamap MF_00318 Enolase [eno]. 2 414 45.82 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 107 123 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 314 325 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 366 383 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 337 351 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 37 51 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_022125 53b66981ab073d688218a36a94c440ae 431 PRINTS PR00148 Enolase signature 161 174 1.3E-46 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 ABE28_008090 d3b4a3d80ce88d2c382b858855946181 211 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 17 208 4.0E-9 T 11-10-2018 ABE28_019810 7e50f4eab7e4a4a07350728ad4e665e8 115 SUPERFAMILY SSF54593 6 114 3.16E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_019810 7e50f4eab7e4a4a07350728ad4e665e8 115 Gene3D G3DSA:3.10.180.10 8 115 2.1E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020055 14e7143f3c0eb3002a6f0f61e68826c1 423 Gene3D G3DSA:3.40.190.10 23 421 1.2E-87 T 11-10-2018 ABE28_020055 14e7143f3c0eb3002a6f0f61e68826c1 423 Pfam PF13416 Bacterial extracellular solute-binding protein 58 362 9.1E-38 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_020055 14e7143f3c0eb3002a6f0f61e68826c1 423 SUPERFAMILY SSF53850 40 417 2.79E-77 T 11-10-2018 ABE28_010925 d7b0ea374f2b8ab9f831388e041bbdff 363 Pfam PF03845 Spore germination protein 11 324 2.1E-78 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_010925 d7b0ea374f2b8ab9f831388e041bbdff 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 12 361 2.0E-55 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_014075 bc6dc47366fe9b340d994f2e7036215e 262 Gene3D G3DSA:3.90.850.10 38 249 2.3E-75 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_014075 bc6dc47366fe9b340d994f2e7036215e 262 SUPERFAMILY SSF56529 37 246 2.09E-72 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_014075 bc6dc47366fe9b340d994f2e7036215e 262 TIGRFAM TIGR02303 HpaG-C-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit 2 245 2.7E-121 T 11-10-2018 IPR012684 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, C-terminal subunit GO:0008704|GO:0018800|GO:1901023 KEGG: 00350+5.3.3.10+4.1.1.68 ABE28_014075 bc6dc47366fe9b340d994f2e7036215e 262 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 46 243 6.4E-60 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_016015 735fa1bb37ec359b5b676f3841e0a499 400 Gene3D G3DSA:3.40.50.2000 197 387 1.1E-30 T 11-10-2018 ABE28_016015 735fa1bb37ec359b5b676f3841e0a499 400 Gene3D G3DSA:3.40.50.2000 23 394 1.1E-30 T 11-10-2018 ABE28_016015 735fa1bb37ec359b5b676f3841e0a499 400 SUPERFAMILY SSF53756 21 398 2.35E-32 T 11-10-2018 ABE28_016015 735fa1bb37ec359b5b676f3841e0a499 400 Pfam PF00534 Glycosyl transferases group 1 210 381 6.6E-14 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 41.702 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 1.5E-126 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 SUPERFAMILY SSF53697 8 249 2.67E-69 T 11-10-2018 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 Gene3D G3DSA:1.10.8.1080 221 298 9.1E-28 T 11-10-2018 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 Pfam PF13580 SIS domain 44 168 2.0E-9 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_010810 c519c252928dc1085c6935df8d78a1be 302 Gene3D G3DSA:3.40.50.10490 2 220 1.3E-76 T 11-10-2018 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 SUPERFAMILY SSF55681 110 424 4.77E-97 T 11-10-2018 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 41.951 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 2 429 3.7E-167 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 1.1E-15 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 Gene3D G3DSA:3.30.930.10 101 430 7.9E-118 T 11-10-2018 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 1.5E-15 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 SUPERFAMILY SSF50249 9 102 1.09E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 2.7E-85 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 ABE28_014065 d1bb34cd557eaa7b08bd8e4d72391c0c 430 Gene3D G3DSA:2.40.50.140 2 99 3.5E-23 T 11-10-2018 ABE28_018460 67e97124ff6597ff0b846cd822414842 287 Pfam PF00583 Acetyltransferase (GNAT) family 150 235 1.3E-4 T 11-10-2018 IPR000182 GNAT domain ABE28_018460 67e97124ff6597ff0b846cd822414842 287 Gene3D G3DSA:3.40.630.30 133 287 1.7E-10 T 11-10-2018 ABE28_018460 67e97124ff6597ff0b846cd822414842 287 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 21 284 1.0E-86 T 11-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 ABE28_018460 67e97124ff6597ff0b846cd822414842 287 SUPERFAMILY SSF55729 131 284 2.38E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 SUPERFAMILY SSF51064 141 196 4.84E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 Pfam PF01025 GrpE 34 196 1.8E-52 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 Gene3D G3DSA:2.30.22.10 140 195 6.0E-24 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 PRINTS PR00773 GrpE protein signature 175 194 1.5E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 PRINTS PR00773 GrpE protein signature 148 163 1.5E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 PRINTS PR00773 GrpE protein signature 94 109 1.5E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 PRINTS PR00773 GrpE protein signature 66 82 1.5E-27 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 Hamap MF_01151 Protein GrpE [grpE]. 7 196 20.511 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 ProSitePatterns PS01071 grpE protein signature. 151 194 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 SUPERFAMILY SSF58014 45 140 2.62E-24 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABE28_015515 aa57e891a7e87a8f7565c7bb40446411 196 Gene3D G3DSA:3.90.20.20 39 138 2.5E-22 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 Gene3D G3DSA:1.20.1250.20 248 448 1.1E-56 T 11-10-2018 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 425 9.7E-149 T 11-10-2018 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 445 1.8E-217 T 11-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 SUPERFAMILY SSF103473 13 443 6.93E-80 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 PIRSF PIRSF002808 5 452 5.2E-161 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 11-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 Pfam PF07690 Major Facilitator Superfamily 34 408 1.2E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_003050 9c0b647b8b9e78be51b03931d5dd58ae 453 Gene3D G3DSA:1.20.1250.20 18 234 2.3E-53 T 11-10-2018 ABE28_016365 e1aba3d6209b485bb61061bdb33488fa 267 PIRSF PIRSF003092 1 267 2.1E-86 T 11-10-2018 IPR025501 ATP binding protein MinD ABE28_016365 e1aba3d6209b485bb61061bdb33488fa 267 Gene3D G3DSA:3.40.50.300 3 247 3.3E-68 T 11-10-2018 ABE28_016365 e1aba3d6209b485bb61061bdb33488fa 267 Pfam PF13614 AAA domain 4 162 1.6E-26 T 11-10-2018 IPR025669 AAA domain ABE28_016365 e1aba3d6209b485bb61061bdb33488fa 267 SUPERFAMILY SSF52540 5 264 2.06E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016365 e1aba3d6209b485bb61061bdb33488fa 267 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 5.7E-116 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 Gene3D G3DSA:3.90.1150.10 246 278 1.8E-6 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 SUPERFAMILY SSF53383 16 363 3.86E-102 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 Gene3D G3DSA:3.90.1150.10 279 369 1.6E-24 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 5 361 3.4E-132 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 PIRSF PIRSF001434 1 365 3.7E-121 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 188 202 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 ABE28_005515 79dce198ee3910da1f4182da8f9eb3f2 370 Gene3D G3DSA:3.40.640.10 3 245 1.0E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_021330 93436e4b5d3c3612b2de7da810a61ef9 134 Gene3D G3DSA:2.40.50.140 2 88 1.8E-32 T 11-10-2018 ABE28_021330 93436e4b5d3c3612b2de7da810a61ef9 134 Pfam PF00575 S1 RNA binding domain 4 77 1.4E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_021330 93436e4b5d3c3612b2de7da810a61ef9 134 SMART SM00316 6 77 5.1E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_021330 93436e4b5d3c3612b2de7da810a61ef9 134 SUPERFAMILY SSF50249 5 88 3.65E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_002500 587a202ba235895f4b52502f30a8844a 190 Gene3D G3DSA:3.40.50.300 1 189 3.2E-41 T 11-10-2018 ABE28_002500 587a202ba235895f4b52502f30a8844a 190 PRINTS PR00988 Uridine kinase signature 45 56 3.4E-7 T 11-10-2018 ABE28_002500 587a202ba235895f4b52502f30a8844a 190 PRINTS PR00988 Uridine kinase signature 143 153 3.4E-7 T 11-10-2018 ABE28_002500 587a202ba235895f4b52502f30a8844a 190 PRINTS PR00988 Uridine kinase signature 17 34 3.4E-7 T 11-10-2018 ABE28_002500 587a202ba235895f4b52502f30a8844a 190 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 74 155 4.3E-6 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 ABE28_002500 587a202ba235895f4b52502f30a8844a 190 SUPERFAMILY SSF52540 15 176 1.51E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 Pfam PF13394 4Fe-4S single cluster domain 26 111 3.0E-11 T 11-10-2018 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 4 239 36.283 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 PIRSF PIRSF000370 2 242 1.3E-51 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 Pfam PF04055 Radical SAM superfamily 28 175 2.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 SUPERFAMILY SSF102114 26 190 4.97E-13 T 11-10-2018 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 Gene3D G3DSA:3.20.20.70 4 212 3.9E-29 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_017800 fd2d8d21461b7cc2c28695f1e9d24ec4 242 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 3 242 1.1E-116 T 11-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 ABE28_012810 49af68aadc9f6c6761c5a8ef0f881bcb 64 Pfam PF14169 Cold-inducible protein YdjO 2 58 9.5E-27 T 11-10-2018 IPR025916 Cold-inducible protein YdjO ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 SUPERFAMILY SSF50037 283 325 5.04E-5 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Gene3D G3DSA:2.30.30.100 280 326 1.1E-7 T 11-10-2018 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 SUPERFAMILY SSF55681 72 277 1.56E-59 T 11-10-2018 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 326 37.525 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Pfam PF08279 HTH domain 6 60 5.1E-18 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Pfam PF02237 Biotin protein ligase C terminal domain 280 324 2.7E-7 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 324 6.3E-70 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 SUPERFAMILY SSF46785 2 61 6.28E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Gene3D G3DSA:1.10.10.10 1 65 8.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 2.1E-17 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABE28_014145 a4a0ea5c43ec53ad429a58f659fa5d3f 326 Gene3D G3DSA:3.30.930.10 68 277 1.2E-67 T 11-10-2018 ABE28_015380 e21613b9ed4f7ebf05429d7dd05434b0 269 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 266 59.564 T 11-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein ABE28_015380 e21613b9ed4f7ebf05429d7dd05434b0 269 Pfam PF03618 Kinase/pyrophosphorylase 6 261 3.3E-97 T 11-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 ABE28_015380 e21613b9ed4f7ebf05429d7dd05434b0 269 Gene3D G3DSA:3.40.50.300 174 269 2.4E-5 T 11-10-2018 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 PIRSF PIRSF000148 6 348 6.0E-133 T 11-10-2018 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 SMART SM00859 8 123 9.7E-45 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 122 1.3E-34 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 329 7.5E-59 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 SUPERFAMILY SSF51735 7 159 1.36E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 343 38.947 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 8 344 1.8E-162 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 Gene3D G3DSA:3.40.50.720 9 340 6.9E-144 T 11-10-2018 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 SUPERFAMILY SSF55347 131 330 1.42E-73 T 11-10-2018 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 Gene3D G3DSA:3.30.360.10 130 326 6.9E-144 T 11-10-2018 ABE28_008225 1a8675c68e54cb4be24114d9c231f14a 351 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_012840 8e41bb5a64faf3b045dfc3b028499e67 189 Gene3D G3DSA:1.20.1260.10 1 184 9.1E-66 T 11-10-2018 IPR012347 Ferritin-like ABE28_012840 8e41bb5a64faf3b045dfc3b028499e67 189 SUPERFAMILY SSF47240 1 185 2.39E-69 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_012840 8e41bb5a64faf3b045dfc3b028499e67 189 Pfam PF05067 Manganese containing catalase 1 183 1.5E-78 T 11-10-2018 IPR007760 Manganese catalase ABE28_011390 d5100c0ce19a426c94f2bd5caf789a9d 599 Gene3D G3DSA:3.40.50.1820 333 598 6.3E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_011390 d5100c0ce19a426c94f2bd5caf789a9d 599 Gene3D G3DSA:2.120.10.30 13 204 5.4E-14 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_011390 d5100c0ce19a426c94f2bd5caf789a9d 599 SUPERFAMILY SSF53474 342 591 2.28E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_011390 d5100c0ce19a426c94f2bd5caf789a9d 599 SUPERFAMILY SSF69304 23 285 2.09E-20 T 11-10-2018 ABE28_011390 d5100c0ce19a426c94f2bd5caf789a9d 599 Pfam PF00326 Prolyl oligopeptidase family 387 594 4.9E-42 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 Gene3D G3DSA:3.30.70.260 147 220 3.7E-16 T 11-10-2018 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 Pfam PF03315 Serine dehydratase beta chain 5 71 4.1E-11 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 1.1E-94 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 PIRSF PIRSF036692 1 220 2.6E-104 T 11-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 Pfam PF01842 ACT domain 149 210 2.7E-10 T 11-10-2018 IPR002912 ACT domain ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 SUPERFAMILY SSF143548 19 137 1.7E-31 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 SUPERFAMILY SSF55021 137 218 2.15E-17 T 11-10-2018 ABE28_007760 00385220dfdb1d3f8e03759fd9e8c97a 220 Gene3D G3DSA:3.30.1330.90 13 80 1.9E-17 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 ABE28_008220 56c43962eeee68d5a995e783826a23d2 200 Gene3D G3DSA:3.40.50.1950 1 199 1.3E-58 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABE28_008220 56c43962eeee68d5a995e783826a23d2 200 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 6 192 1.0E-98 T 11-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B ABE28_008220 56c43962eeee68d5a995e783826a23d2 200 Pfam PF02441 Flavoprotein 6 134 9.6E-18 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 ABE28_008220 56c43962eeee68d5a995e783826a23d2 200 PIRSF PIRSF001390 1 195 4.6E-81 T 11-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B ABE28_008220 56c43962eeee68d5a995e783826a23d2 200 SUPERFAMILY SSF52507 6 192 2.88E-30 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 ABE28_006175 8911ed693e695b63c3d5ca862a53f481 288 Pfam PF13743 Thioredoxin 21 213 3.0E-73 T 11-10-2018 ABE28_006175 8911ed693e695b63c3d5ca862a53f481 288 Gene3D G3DSA:3.40.30.10 23 211 7.9E-35 T 11-10-2018 ABE28_006175 8911ed693e695b63c3d5ca862a53f481 288 SUPERFAMILY SSF52833 16 220 4.8E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_006175 8911ed693e695b63c3d5ca862a53f481 288 Gene3D G3DSA:1.10.472.60 58 182 7.9E-35 T 11-10-2018 ABE28_002025 8c343acdc1704f3e88c2878835052ade 192 Pfam PF00583 Acetyltransferase (GNAT) family 54 166 9.5E-17 T 11-10-2018 IPR000182 GNAT domain ABE28_002025 8c343acdc1704f3e88c2878835052ade 192 SUPERFAMILY SSF55729 1 178 1.58E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_002025 8c343acdc1704f3e88c2878835052ade 192 Gene3D G3DSA:3.40.630.30 2 189 8.9E-49 T 11-10-2018 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 394 411 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 SUPERFAMILY SSF55604 384 454 2.62E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 Pfam PF02378 Phosphotransferase system, EIIC 9 293 4.1E-77 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 Gene3D G3DSA:2.70.70.10 476 635 1.2E-59 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 550 562 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 SUPERFAMILY SSF51261 487 627 7.15E-52 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 490 608 8.1E-45 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 352 441 7.9E-19 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 Pfam PF00367 phosphotransferase system, EIIB 386 416 1.0E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 452 8.8E-193 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 488 610 7.0E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_001120 7a5542cc98a8958e79460025c41de2f6 636 Gene3D G3DSA:3.30.1360.60 381 456 8.2E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_011470 9b6d146fe844013fb17f52ca4264bfd8 253 Pfam PF03551 Transcriptional regulator PadR-like family 158 222 2.9E-8 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_011470 9b6d146fe844013fb17f52ca4264bfd8 253 Gene3D G3DSA:1.10.10.10 17 120 3.8E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011470 9b6d146fe844013fb17f52ca4264bfd8 253 Gene3D G3DSA:1.10.10.10 142 244 5.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011470 9b6d146fe844013fb17f52ca4264bfd8 253 SUPERFAMILY SSF46785 146 240 2.21E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011470 9b6d146fe844013fb17f52ca4264bfd8 253 SUPERFAMILY SSF46785 19 101 2.84E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001785 4bb1a3f7089c802e6dbe8220cd4f2333 318 Gene3D G3DSA:3.40.50.300 21 187 1.4E-44 T 11-10-2018 ABE28_001785 4bb1a3f7089c802e6dbe8220cd4f2333 318 Gene3D G3DSA:1.10.8.300 201 309 1.7E-34 T 11-10-2018 ABE28_001785 4bb1a3f7089c802e6dbe8220cd4f2333 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 40 170 5.3E-64 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 ABE28_001785 4bb1a3f7089c802e6dbe8220cd4f2333 318 SUPERFAMILY SSF52540 8 284 4.03E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001785 4bb1a3f7089c802e6dbe8220cd4f2333 318 PIRSF PIRSF002849 1 314 4.4E-133 T 11-10-2018 ABE28_005600 213b70a14175862ffb8ebf7caedb9a64 118 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 4 107 3.1E-24 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_005600 213b70a14175862ffb8ebf7caedb9a64 118 Gene3D G3DSA:1.20.1500.10 1 112 4.1E-39 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_005600 213b70a14175862ffb8ebf7caedb9a64 118 Hamap MF_01526 UPF0342 protein . 1 112 19.044 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_005600 213b70a14175862ffb8ebf7caedb9a64 118 SUPERFAMILY SSF158622 3 112 5.62E-37 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 SUPERFAMILY SSF55174 2 200 5.63E-71 T 11-10-2018 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 Gene3D G3DSA:3.10.290.10 91 185 6.1E-77 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.67 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 SMART SM00363 92 155 8.5E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 SMART SM01390 3 91 7.1E-48 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 Pfam PF01479 S4 domain 93 139 7.5E-20 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 1.8E-30 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 Gene3D G3DSA:1.10.1050.10 6 200 6.1E-77 T 11-10-2018 ABE28_017265 029c9f32d4185b958a5c2ae51d42af50 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 2.7E-86 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 ABE28_013340 b9276516f8479297ffaf3c7fecfa181e 280 SUPERFAMILY SSF82549 1 279 1.83E-89 T 11-10-2018 ABE28_013340 b9276516f8479297ffaf3c7fecfa181e 280 Gene3D G3DSA:3.30.1180.10 153 278 7.3E-36 T 11-10-2018 ABE28_013340 b9276516f8479297ffaf3c7fecfa181e 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 278 8.4E-91 T 11-10-2018 IPR003797 DegV ABE28_013340 b9276516f8479297ffaf3c7fecfa181e 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 2.6E-97 T 11-10-2018 IPR003797 DegV ABE28_013340 b9276516f8479297ffaf3c7fecfa181e 280 Gene3D G3DSA:3.40.50.10170 1 152 5.5E-54 T 11-10-2018 ABE28_011725 e63eaf256e8329d3a374b882f0abd8f9 180 Pfam PF04308 Ribonuclease H-like 24 178 7.5E-48 T 11-10-2018 IPR007405 Bacteriophage KVP40, Orf299 ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 5.2E-42 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 Pfam PF13242 HAD-hyrolase-like 179 250 3.3E-22 T 11-10-2018 ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 Gene3D G3DSA:3.40.50.1000 6 246 7.0E-87 T 11-10-2018 IPR023214 HAD superfamily ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 PIRSF PIRSF000915 1 116 1.3E-27 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 PIRSF PIRSF000915 111 252 8.7E-33 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 3.9E-123 T 11-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 1.6E-27 T 11-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 Gene3D G3DSA:3.40.50.1000 72 180 7.0E-87 T 11-10-2018 IPR023214 HAD superfamily ABE28_021650 0a55ed99b096fc0016959acad2bc3d8f 255 SUPERFAMILY SSF56784 4 249 3.69E-71 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 Gene3D G3DSA:3.40.50.720 1 254 5.7E-76 T 11-10-2018 ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 21 251 9.2E-56 T 11-10-2018 ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 SUPERFAMILY SSF51735 9 251 5.2E-74 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 8.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 8.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 8.7E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_003945 5afb947f56fcc1d9b2fe8db94d983a9e 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 2.4E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 SUPERFAMILY SSF51905 9 376 3.24E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 4.2E-10 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 305 4.2E-10 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.2E-10 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 339 355 4.2E-10 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 Gene3D G3DSA:3.30.9.30 41 362 2.6E-119 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 SUPERFAMILY SSF54373 182 283 4.71E-13 T 11-10-2018 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 Pfam PF01494 FAD binding domain 10 350 9.0E-16 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ABE28_008485 242cb6675f5b27c6b7e7b7dd8c43a569 402 Gene3D G3DSA:3.50.50.60 10 355 2.6E-119 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 8 466 8.7E-216 T 11-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 Gene3D G3DSA:3.30.1360.60 1 77 8.0E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 Pfam PF00367 phosphotransferase system, EIIB 11 42 6.2E-15 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 5.1E-17 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 SUPERFAMILY SSF55604 8 82 9.42E-21 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_009860 1e749ccbaff305e8425b3ebd18a3ecb7 483 Pfam PF02378 Phosphotransferase system, EIIC 111 408 2.4E-38 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 Gene3D G3DSA:3.40.50.12780 14 451 6.8E-134 T 11-10-2018 ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 Gene3D G3DSA:3.30.300.310 456 560 2.3E-33 T 11-10-2018 ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 SUPERFAMILY SSF56801 14 555 2.88E-161 T 11-10-2018 ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 544 3.7E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_016715 1346765d618988cfd1ebb3f48d3ba949 565 Pfam PF00501 AMP-binding enzyme 30 459 1.3E-115 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 SUPERFAMILY SSF48498 78 192 4.45E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 1.2E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 Gene3D G3DSA:1.10.357.10 1 196 2.2E-51 T 11-10-2018 ABE28_010345 c23dc6383dd7b74715ce0a7f16e637f7 198 SUPERFAMILY SSF46689 5 82 9.23E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_023100 e9128ce778c308b59876a779cbb0f14b 282 Gene3D G3DSA:3.30.930.10 6 281 1.1E-77 T 11-10-2018 ABE28_023100 e9128ce778c308b59876a779cbb0f14b 282 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 184 5.8E-14 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABE28_023100 e9128ce778c308b59876a779cbb0f14b 282 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 278 49.937 T 11-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 ABE28_023100 e9128ce778c308b59876a779cbb0f14b 282 SUPERFAMILY SSF55681 9 277 7.79E-69 T 11-10-2018 ABE28_001410 fe8ec05684108f3a49ea9d4adb047635 133 SUPERFAMILY SSF55874 21 128 9.94E-16 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001410 fe8ec05684108f3a49ea9d4adb047635 133 Gene3D G3DSA:3.30.565.10 6 131 1.0E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_001410 fe8ec05684108f3a49ea9d4adb047635 133 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 129 9.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_001410 fe8ec05684108f3a49ea9d4adb047635 133 SMART SM00387 34 133 5.9E-4 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 51 64 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 23 199 4.5E-25 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 Pfam PF08281 Sigma-70, region 4 153 195 9.1E-8 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 SUPERFAMILY SSF88659 114 201 9.29E-9 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 PIRSF PIRSF002939 1 206 5.2E-89 T 11-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 Pfam PF04542 Sigma-70 region 2 27 96 1.3E-13 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_006330 62ea730e3e55849e5841b7360d5d4daa 206 SUPERFAMILY SSF88946 9 96 5.36E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 Gene3D G3DSA:3.90.550.10 2 227 4.7E-78 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 221 5.6E-74 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 222 9.9E-74 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 99 106 - T 11-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 4 221 42.517 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 ABE28_000460 fb6cb41e0c9fc33e5eec394c65528783 227 SUPERFAMILY SSF53448 5 221 2.19E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012565 1ebe10436db012ea0934f9b276476f88 299 SUPERFAMILY SSF51735 1 296 3.78E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012565 1ebe10436db012ea0934f9b276476f88 299 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 229 2.1E-39 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_012565 1ebe10436db012ea0934f9b276476f88 299 Gene3D G3DSA:3.90.25.10 170 288 5.8E-60 T 11-10-2018 ABE28_012565 1ebe10436db012ea0934f9b276476f88 299 Gene3D G3DSA:3.40.50.720 8 281 5.8E-60 T 11-10-2018 ABE28_003435 c345c75c07c862af0a132bf797047638 119 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 3 119 1.1E-37 T 11-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_003435 c345c75c07c862af0a132bf797047638 119 Gene3D G3DSA:2.60.40.180 2 119 2.5E-38 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_003435 c345c75c07c862af0a132bf797047638 119 SUPERFAMILY SSF49472 3 119 1.96E-37 T 11-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_003435 c345c75c07c862af0a132bf797047638 119 ProSitePatterns PS00768 Transthyretin signature 1. 8 23 - T 11-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_003435 c345c75c07c862af0a132bf797047638 119 Pfam PF00576 HIUase/Transthyretin family 5 118 4.6E-34 T 11-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_003435 c345c75c07c862af0a132bf797047638 119 ProSitePatterns PS00769 Transthyretin signature 2. 102 114 - T 11-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 ABE28_011100 5e093a56fbe9df4d59bda2de43b8b78f 424 Gene3D G3DSA:1.20.1250.20 14 198 1.5E-12 T 11-10-2018 ABE28_011100 5e093a56fbe9df4d59bda2de43b8b78f 424 Pfam PF07690 Major Facilitator Superfamily 235 410 1.0E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_011100 5e093a56fbe9df4d59bda2de43b8b78f 424 Pfam PF07690 Major Facilitator Superfamily 20 190 9.4E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_011100 5e093a56fbe9df4d59bda2de43b8b78f 424 SUPERFAMILY SSF103473 12 403 5.62E-48 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011100 5e093a56fbe9df4d59bda2de43b8b78f 424 Gene3D G3DSA:1.20.1250.20 220 414 1.6E-22 T 11-10-2018 ABE28_010700 4bcdf8bef9aca0b1fe0929170ff17f35 50 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 1 50 2.6E-22 T 11-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 ABE28_010700 4bcdf8bef9aca0b1fe0929170ff17f35 50 Pfam PF08175 Small acid-soluble spore protein O family 2 50 6.3E-21 T 11-10-2018 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 29.91 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 Pfam PF00453 Ribosomal protein L20 3 109 7.2E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 20 70 8.0E-13 T 11-10-2018 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 Gene3D G3DSA:1.10.720.90 2 55 9.2E-26 T 11-10-2018 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 Gene3D G3DSA:1.10.1900.20 56 118 1.2E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 4.4E-50 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 SUPERFAMILY SSF74731 2 117 3.01E-49 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016855 7c71ab4bd90f13e0033302d689efdc38 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 5.5E-41 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_013235 5d5d4f55e957d63812b8d0523aacd212 100 SUPERFAMILY SSF46689 8 90 1.79E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_001000 5d5d4f55e957d63812b8d0523aacd212 100 SUPERFAMILY SSF46689 8 90 1.79E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_002660 e4149b367e30a44b2f3347c3eb964c84 187 Gene3D G3DSA:1.10.443.10 8 173 5.3E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_002660 e4149b367e30a44b2f3347c3eb964c84 187 SUPERFAMILY SSF56349 8 179 2.83E-29 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_002660 e4149b367e30a44b2f3347c3eb964c84 187 Pfam PF00589 Phage integrase family 11 172 3.6E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 Gene3D G3DSA:3.40.50.720 23 306 2.0E-84 T 11-10-2018 ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 SUPERFAMILY SSF51735 67 304 4.67E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 77 304 1.3E-59 T 11-10-2018 ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 237 254 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 269 289 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 69 86 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 155 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 206 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 235 1.0E-34 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 216 235 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 155 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017700 76f3743e444d83436d8f7309bd355de4 309 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 196 204 1.4E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 PIRSF PIRSF005917 3 293 1.6E-99 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 16 289 2.3E-77 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 Gene3D G3DSA:3.30.950.10 123 237 2.1E-41 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 214 8.1E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 93 104 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 15 233 36.356 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 Gene3D G3DSA:3.40.1010.10 2 122 1.1E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 ABE28_000155 1cae6819ec7bb565553992ffb0a5bc75 295 SUPERFAMILY SSF53790 14 231 3.14E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 ABE28_013275 60f86e47bcc3c7d24f1f2b7035e2e4ed 221 Gene3D G3DSA:3.40.1080.10 4 217 4.4E-86 T 11-10-2018 ABE28_013275 60f86e47bcc3c7d24f1f2b7035e2e4ed 221 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 212 4.0E-88 T 11-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 ABE28_013275 60f86e47bcc3c7d24f1f2b7035e2e4ed 221 SMART SM00882 9 205 4.2E-56 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_013275 60f86e47bcc3c7d24f1f2b7035e2e4ed 221 Pfam PF01144 Coenzyme A transferase 11 189 6.9E-35 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_013275 60f86e47bcc3c7d24f1f2b7035e2e4ed 221 SUPERFAMILY SSF100950 7 219 1.3E-66 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 SUPERFAMILY SSF53795 132 299 9.77E-41 T 11-10-2018 ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.673 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 SUPERFAMILY SSF75138 3 131 7.59E-38 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 Pfam PF02603 HPr Serine kinase N terminus 4 127 8.0E-37 T 11-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 Gene3D G3DSA:3.40.1390.20 3 130 1.9E-40 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 Gene3D G3DSA:3.40.50.300 131 310 5.2E-76 T 11-10-2018 ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 6 302 6.5E-117 T 11-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 ABE28_022285 81ec0e96f17e774eb66af1e7a6fa0fe0 311 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 1.2E-77 T 11-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 ABE28_017455 ddd9236288f3cac8a3392e6bd229c456 189 Gene3D G3DSA:3.90.1140.10 8 189 5.8E-39 T 11-10-2018 ABE28_017455 ddd9236288f3cac8a3392e6bd229c456 189 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 7 187 22.108 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 ABE28_017455 ddd9236288f3cac8a3392e6bd229c456 189 SUPERFAMILY SSF55144 8 187 8.89E-36 T 11-10-2018 IPR009097 Cyclic phosphodiesterase ABE28_017455 ddd9236288f3cac8a3392e6bd229c456 189 Pfam PF13563 2'-5' RNA ligase superfamily 43 171 3.5E-16 T 11-10-2018 ABE28_017455 ddd9236288f3cac8a3392e6bd229c456 189 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 8 187 6.6E-41 T 11-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 ABE28_005900 a3061f5af3a952833fe97e5c2c660b57 73 Pfam PF10676 Spore germination protein gerPA/gerPF 2 72 1.7E-27 T 11-10-2018 IPR019618 Spore germination protein GerPA/GerPF ABE28_012545 496c1a430bcb4ef7c38aebd064c3cfad 238 Gene3D G3DSA:3.90.550.10 1 237 2.9E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012545 496c1a430bcb4ef7c38aebd064c3cfad 238 SUPERFAMILY SSF53448 3 217 5.43E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_012545 496c1a430bcb4ef7c38aebd064c3cfad 238 Pfam PF00535 Glycosyl transferase family 2 5 162 2.7E-28 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_002825 99fc4507efc815da3887988bdda43901 258 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 258 1.2E-69 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_002825 99fc4507efc815da3887988bdda43901 258 Gene3D G3DSA:3.40.190.10 41 255 7.8E-76 T 11-10-2018 ABE28_002825 99fc4507efc815da3887988bdda43901 258 SUPERFAMILY SSF53850 1 257 3.48E-77 T 11-10-2018 ABE28_002825 99fc4507efc815da3887988bdda43901 258 Gene3D G3DSA:3.40.190.10 121 217 7.8E-76 T 11-10-2018 ABE28_002825 99fc4507efc815da3887988bdda43901 258 SMART SM00062 37 258 6.7E-71 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_002825 99fc4507efc815da3887988bdda43901 258 SMART SM00079 37 258 3.2E-7 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 46 61 7.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 7.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 90 103 7.7E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 SUPERFAMILY SSF53474 2 264 1.06E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 Pfam PF12697 Alpha/beta hydrolase family 23 257 1.8E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_023500 4acf62aafa78b1ae4aee2458e1ab771e 273 Gene3D G3DSA:3.40.50.1820 1 266 4.5E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_017460 97717f4d304e9e586eef450080a6191a 412 Pfam PF01566 Natural resistance-associated macrophage protein 37 384 1.0E-116 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 410 36.207 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 15 378 5.5E-118 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 123 142 8.8E-30 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 300 319 8.8E-30 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 95 121 8.8E-30 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 148 169 8.8E-30 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_017460 97717f4d304e9e586eef450080a6191a 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 198 221 8.8E-30 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_018600 6f01f0ffc82fd585b1f91716edea5666 427 Pfam PF02447 GntP family permease 4 244 1.2E-14 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_009970 51aff1df6f4e9c455d257be1ef186666 146 Gene3D G3DSA:3.30.310.250 1 146 8.7E-50 T 11-10-2018 IPR038449 SirA superfamily ABE28_009970 51aff1df6f4e9c455d257be1ef186666 146 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 141 5.6E-41 T 11-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA ABE28_001700 7bed4fa444808c3d19f337b74a3b4ae4 149 Gene3D G3DSA:3.40.1510.10 1 149 1.8E-63 T 11-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily ABE28_001700 7bed4fa444808c3d19f337b74a3b4ae4 149 Pfam PF09021 HutP 9 147 1.1E-36 T 11-10-2018 IPR015111 Hut operon regulatory protein HutP ABE28_001700 7bed4fa444808c3d19f337b74a3b4ae4 149 SUPERFAMILY SSF111064 7 149 3.01E-53 T 11-10-2018 IPR036482 Hut operon regulatory protein HutP superfamily ABE28_016380 21739ff099b1b10c8d03c3c2ba1cb6b2 289 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 276 7.7E-62 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABE28_016380 21739ff099b1b10c8d03c3c2ba1cb6b2 289 Pfam PF04085 rod shape-determining protein MreC 122 272 2.8E-44 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABE28_016380 21739ff099b1b10c8d03c3c2ba1cb6b2 289 Gene3D G3DSA:2.40.10.340 112 184 9.8E-22 T 11-10-2018 ABE28_016380 21739ff099b1b10c8d03c3c2ba1cb6b2 289 Gene3D G3DSA:2.40.10.350 185 259 3.1E-29 T 11-10-2018 ABE28_016380 21739ff099b1b10c8d03c3c2ba1cb6b2 289 PIRSF PIRSF038471 1 285 7.4E-62 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 ABE28_019245 841b0dff05683fd8e16117255e310db6 389 Gene3D G3DSA:1.20.1090.10 184 383 1.5E-59 T 11-10-2018 ABE28_019245 841b0dff05683fd8e16117255e310db6 389 SUPERFAMILY SSF56796 4 386 1.07E-111 T 11-10-2018 ABE28_019245 841b0dff05683fd8e16117255e310db6 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 375 2.1E-108 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABE28_019245 841b0dff05683fd8e16117255e310db6 389 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABE28_019245 841b0dff05683fd8e16117255e310db6 389 Gene3D G3DSA:3.40.50.1970 1 183 3.7E-52 T 11-10-2018 ABE28_001905 448719702eda02807093c608648e845a 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 1.6E-32 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001905 448719702eda02807093c608648e845a 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 1.0E-28 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001905 448719702eda02807093c608648e845a 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 3 80 1.3E-35 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001905 448719702eda02807093c608648e845a 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 21.146 T 11-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 ABE28_001905 448719702eda02807093c608648e845a 84 Gene3D G3DSA:3.30.1280.10 1 84 2.2E-36 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_001905 448719702eda02807093c608648e845a 84 SUPERFAMILY SSF82697 1 80 6.28E-29 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 ABE28_006915 0400e24c5f09517f06e29ec492022aaa 407 ProSitePatterns PS00216 Sugar transport proteins signature 1. 278 294 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_006915 0400e24c5f09517f06e29ec492022aaa 407 Gene3D G3DSA:1.20.1250.20 221 398 4.8E-21 T 11-10-2018 ABE28_006915 0400e24c5f09517f06e29ec492022aaa 407 SUPERFAMILY SSF103473 14 394 1.01E-51 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006915 0400e24c5f09517f06e29ec492022aaa 407 Gene3D G3DSA:1.20.1250.20 6 198 6.2E-21 T 11-10-2018 ABE28_006915 0400e24c5f09517f06e29ec492022aaa 407 Pfam PF07690 Major Facilitator Superfamily 24 361 3.0E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_016065 cb7a12c4330f9bcdee1f3760c553ecf3 282 Gene3D G3DSA:3.40.50.1110 83 280 2.8E-21 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_016065 cb7a12c4330f9bcdee1f3760c553ecf3 282 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 91 267 1.5E-10 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_016065 cb7a12c4330f9bcdee1f3760c553ecf3 282 SUPERFAMILY SSF52266 85 279 8.66E-21 T 11-10-2018 ABE28_004050 641d85c4e80419cf201826242ce8924b 138 SUPERFAMILY SSF46785 18 133 8.09E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004050 641d85c4e80419cf201826242ce8924b 138 Pfam PF03965 Penicillinase repressor 18 131 8.0E-27 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ABE28_004050 641d85c4e80419cf201826242ce8924b 138 PIRSF PIRSF019455 14 138 7.7E-24 T 11-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 ABE28_004050 641d85c4e80419cf201826242ce8924b 138 Gene3D G3DSA:1.10.10.10 17 92 8.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 202 1.8E-66 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 SUPERFAMILY SSF52317 2 204 6.16E-54 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 35.663 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 Pfam PF00117 Glutamine amidotransferase class-I 18 199 4.7E-16 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 Gene3D G3DSA:3.40.50.880 1 210 5.3E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_022230 212a64b32410da2ee6245cd3377f1bf3 210 PIRSF PIRSF000495 1 206 2.2E-72 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 SUPERFAMILY SSF54593 169 281 2.69E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 278 1.2E-4 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 15 125 7.2E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 SUPERFAMILY SSF54593 5 161 5.91E-38 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 Gene3D G3DSA:3.10.180.10 168 282 3.2E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 ProSitePatterns PS00934 Glyoxalase I signature 1. 172 193 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 ABE28_018010 0c96f3b71f3f7823932d317d4271f00d 282 Gene3D G3DSA:3.10.180.10 10 136 6.4E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_015415 954244e3d9e1dc4bd79154ad1ac2c9fb 121 Gene3D G3DSA:3.40.140.10 1 121 7.3E-54 T 11-10-2018 ABE28_015415 954244e3d9e1dc4bd79154ad1ac2c9fb 121 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 2 119 7.1E-45 T 11-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 ABE28_015415 954244e3d9e1dc4bd79154ad1ac2c9fb 121 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 42 82 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 ABE28_015415 954244e3d9e1dc4bd79154ad1ac2c9fb 121 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 91 3.4E-14 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain ABE28_015415 954244e3d9e1dc4bd79154ad1ac2c9fb 121 SUPERFAMILY SSF53927 2 119 1.58E-45 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 ABE28_009560 c97ed868739ebe6c5cade234e86f6838 478 Pfam PF02687 FtsX-like permease family 341 470 1.7E-9 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 Gene3D G3DSA:1.10.10.10 1 121 3.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 51 1.7E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 67 1.7E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 84 99 1.7E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.7E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 Pfam PF01022 Bacterial regulatory protein, arsR family 41 87 5.2E-13 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 SMART SM00418 34 113 5.9E-26 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 SUPERFAMILY SSF46785 18 113 3.72E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_000975 41ec39d41590b5bf8d12254af3d00f15 122 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 58 76 - T 11-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 ABE28_012585 e9095aba9ec5beedb99bb34331501ccc 302 SUPERFAMILY SSF51735 1 299 2.41E-88 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012585 e9095aba9ec5beedb99bb34331501ccc 302 Gene3D G3DSA:3.40.50.720 4 234 1.7E-100 T 11-10-2018 ABE28_012585 e9095aba9ec5beedb99bb34331501ccc 302 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 297 1.9E-60 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_012585 e9095aba9ec5beedb99bb34331501ccc 302 Gene3D G3DSA:3.90.25.10 172 298 1.7E-100 T 11-10-2018 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 1.6E-58 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 45.931 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 4.2E-124 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 PIRSF PIRSF036480 17 299 4.3E-109 T 11-10-2018 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 Gene3D G3DSA:3.40.50.170 104 299 4.5E-71 T 11-10-2018 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 Pfam PF01842 ACT domain 22 76 4.1E-8 T 11-10-2018 IPR002912 ACT domain ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 SUPERFAMILY SSF53328 104 299 1.02E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 SUPERFAMILY SSF55021 21 101 2.37E-14 T 11-10-2018 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 Pfam PF00551 Formyl transferase 104 281 1.3E-40 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 ABE28_023380 e660df39cb2f9e7ea8aebd2a41f91df4 299 Gene3D G3DSA:3.30.70.260 19 101 4.9E-22 T 11-10-2018 ABE28_015235 145087574cfe90bbbea815bbb2286197 275 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_015235 145087574cfe90bbbea815bbb2286197 275 Gene3D G3DSA:3.40.50.300 30 271 5.4E-62 T 11-10-2018 ABE28_015235 145087574cfe90bbbea815bbb2286197 275 SMART SM00382 53 262 2.9E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_015235 145087574cfe90bbbea815bbb2286197 275 SUPERFAMILY SSF52540 29 270 1.18E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015235 145087574cfe90bbbea815bbb2286197 275 Pfam PF00005 ABC transporter 44 200 1.1E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_015235 145087574cfe90bbbea815bbb2286197 275 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 30 275 7.5E-126 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 4 104 1.8E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 SUPERFAMILY SSF82607 10 104 2.35E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 98 23.416 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 Pfam PF02575 YbaB/EbfC DNA-binding family 10 100 1.2E-35 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 Gene3D G3DSA:3.30.1310.10 1 105 3.2E-40 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily ABE28_000070 c2734755c5c20566ef8190f90d05a86b 105 PIRSF PIRSF004555 2 105 8.8E-41 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family ABE28_005310 38cf71c0284b45d35cc0dbe2c8e9b7c1 347 Pfam PF01594 AI-2E family transporter 12 338 3.2E-46 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_005310 38cf71c0284b45d35cc0dbe2c8e9b7c1 347 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 15 341 3.6E-91 T 11-10-2018 IPR014227 Putative transport protein YtvI-like ABE28_001780 95c26f0adb8d24a2b3054310d9509850 164 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 56 150 1.0E-36 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_001780 95c26f0adb8d24a2b3054310d9509850 164 Pfam PF01923 Cobalamin adenosyltransferase 13 140 3.3E-10 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_001780 95c26f0adb8d24a2b3054310d9509850 164 Gene3D G3DSA:1.20.1200.10 8 163 1.7E-18 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_001780 95c26f0adb8d24a2b3054310d9509850 164 SUPERFAMILY SSF89028 4 153 1.14E-29 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_023730 7b737b6b212c641d605748a921e25093 94 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.398 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_023730 7b737b6b212c641d605748a921e25093 94 Gene3D G3DSA:3.30.70.60 1 94 2.4E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 ABE28_023730 7b737b6b212c641d605748a921e25093 94 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 92 1.6E-30 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023730 7b737b6b212c641d605748a921e25093 94 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 ABE28_023730 7b737b6b212c641d605748a921e25093 94 SUPERFAMILY SSF54995 1 92 1.31E-31 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023730 7b737b6b212c641d605748a921e25093 94 Pfam PF01250 Ribosomal protein S6 3 91 9.4E-29 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_004175 5cb54fcca1191e05c522865813fb590c 182 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 39 176 1.4E-49 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 ABE28_004175 5cb54fcca1191e05c522865813fb590c 182 Pfam PF06866 Protein of unknown function (DUF1256) 28 175 1.5E-56 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 ABE28_004175 5cb54fcca1191e05c522865813fb590c 182 SUPERFAMILY SSF53163 20 179 2.09E-36 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABE28_015240 7610250db056a9ff6c353f3329f01291 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 284 1.3E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_015240 7610250db056a9ff6c353f3329f01291 292 SUPERFAMILY SSF161098 29 277 2.43E-40 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_015240 7610250db056a9ff6c353f3329f01291 292 Gene3D G3DSA:1.10.3720.10 60 291 1.8E-34 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_015240 7610250db056a9ff6c353f3329f01291 292 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 22 289 1.4E-86 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 ABE28_005630 cb09d2a8c711cf7f8ed468a8c7388258 538 Gene3D G3DSA:3.30.300.310 431 537 3.8E-33 T 11-10-2018 ABE28_005630 cb09d2a8c711cf7f8ed468a8c7388258 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 521 1.3E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_005630 cb09d2a8c711cf7f8ed468a8c7388258 538 Pfam PF00501 AMP-binding enzyme 14 435 5.9E-94 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_005630 cb09d2a8c711cf7f8ed468a8c7388258 538 SUPERFAMILY SSF56801 6 534 3.14E-137 T 11-10-2018 ABE28_005630 cb09d2a8c711cf7f8ed468a8c7388258 538 Gene3D G3DSA:3.40.50.12780 1 430 8.8E-126 T 11-10-2018 ABE28_015590 ac2d7c2560819a65031fb057a2078190 118 Pfam PF02410 Ribosomal silencing factor during starvation 11 104 5.9E-26 T 11-10-2018 ABE28_015590 ac2d7c2560819a65031fb057a2078190 118 Gene3D G3DSA:3.30.460.10 1 108 2.0E-38 T 11-10-2018 ABE28_015590 ac2d7c2560819a65031fb057a2078190 118 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 2 105 25.048 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABE28_015590 ac2d7c2560819a65031fb057a2078190 118 SUPERFAMILY SSF81301 1 114 1.37E-39 T 11-10-2018 ABE28_015590 ac2d7c2560819a65031fb057a2078190 118 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 9 104 1.5E-35 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS ABE28_010800 4626977363172e762192453902223373 133 PRINTS PR01483 Fatty acid synthase signature 23 45 4.3E-5 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ABE28_010800 4626977363172e762192453902223373 133 PRINTS PR01483 Fatty acid synthase signature 45 66 4.3E-5 T 11-10-2018 IPR003965 Fatty acid synthase GO:0004312|GO:0005835|GO:0006633|GO:0055114 ABE28_010800 4626977363172e762192453902223373 133 SUPERFAMILY SSF54637 5 132 3.03E-27 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_010800 4626977363172e762192453902223373 133 Gene3D G3DSA:3.10.129.10 5 131 3.1E-29 T 11-10-2018 ABE28_010800 4626977363172e762192453902223373 133 Pfam PF01575 MaoC like domain 17 116 2.0E-21 T 11-10-2018 IPR002539 MaoC-like dehydratase domain ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 SUPERFAMILY SSF52025 112 221 4.97E-26 T 11-10-2018 ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 SUPERFAMILY SSF53187 39 438 2.72E-60 T 11-10-2018 ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 Pfam PF02225 PA domain 130 213 1.9E-19 T 11-10-2018 IPR003137 PA domain ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 Gene3D G3DSA:3.40.630.10 63 429 2.9E-133 T 11-10-2018 ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 Pfam PF04389 Peptidase family M28 241 433 9.0E-43 T 11-10-2018 IPR007484 Peptidase M28 ABE28_002155 d2d466d2a3569007b5ff5dc779562153 465 Gene3D G3DSA:3.50.30.30 103 231 2.9E-133 T 11-10-2018 ABE28_007555 09b44b24c3ce8420676bb66b3bd7e491 89 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 75 4.9E-28 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH ABE28_007555 09b44b24c3ce8420676bb66b3bd7e491 89 Gene3D G3DSA:2.30.30.240 1 77 2.1E-12 T 11-10-2018 ABE28_007555 09b44b24c3ce8420676bb66b3bd7e491 89 SUPERFAMILY SSF50346 1 75 1.37E-14 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ABE28_007555 09b44b24c3ce8420676bb66b3bd7e491 89 Pfam PF05239 PRC-barrel domain 3 75 1.2E-13 T 11-10-2018 IPR027275 PRC-barrel domain ABE28_016705 e4f77ebb19d1048db74e0245cd7ee151 257 SUPERFAMILY SSF52096 2 257 4.58E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_016705 e4f77ebb19d1048db74e0245cd7ee151 257 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 ABE28_016705 e4f77ebb19d1048db74e0245cd7ee151 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 256 7.5E-64 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 ABE28_016705 e4f77ebb19d1048db74e0245cd7ee151 257 Gene3D G3DSA:3.90.226.10 1 257 3.7E-91 T 11-10-2018 ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 Pfam PF07848 PaaX-like protein 1 66 3.5E-28 T 11-10-2018 IPR012906 PaaX-like, N-terminal ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 TIGRFAM TIGR02277 PaaX_trns_reg: phenylacetic acid degradation operon negative regulatory protein PaaX 1 282 2.3E-101 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 Pfam PF08223 PaaX-like protein C-terminal domain 162 260 9.5E-33 T 11-10-2018 IPR013225 PaaX-like, C-terminal ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 Gene3D G3DSA:3.30.70.2650 80 168 1.6E-6 T 11-10-2018 ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 Gene3D G3DSA:1.10.10.10 1 78 1.5E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 SUPERFAMILY SSF46785 9 81 1.39E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_005150 a0dfd11a441c536f887ea9466e140e24 286 PIRSF PIRSF020623 1 285 7.6E-104 T 11-10-2018 IPR011965 Phenylacetic acid degradation operon negative regulatory protein PaaX GO:0006351 ABE28_006720 17d2f5f43cbec1c113e478eb39f83c4b 261 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 244 29.437 T 11-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 ABE28_006720 17d2f5f43cbec1c113e478eb39f83c4b 261 Pfam PF02096 60Kd inner membrane protein 53 241 2.3E-48 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABE28_006720 17d2f5f43cbec1c113e478eb39f83c4b 261 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 52 241 1.2E-53 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_016440 75867b74f7bcf83446b801fe864be97e 465 TIGRFAM TIGR02907 spore_VI_D: stage VI sporulation protein D 9 458 1.6E-60 T 11-10-2018 IPR014256 Sporulation stage VI, protein D ABE28_016440 75867b74f7bcf83446b801fe864be97e 465 Gene3D G3DSA:3.10.350.10 405 464 7.9E-11 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_016440 75867b74f7bcf83446b801fe864be97e 465 Pfam PF01476 LysM domain 416 458 8.5E-9 T 11-10-2018 IPR018392 LysM domain ABE28_016440 75867b74f7bcf83446b801fe864be97e 465 SMART SM00257 414 458 1.3E-7 T 11-10-2018 IPR018392 LysM domain ABE28_016440 75867b74f7bcf83446b801fe864be97e 465 SUPERFAMILY SSF54106 414 458 1.1E-7 T 11-10-2018 ABE28_022280 ca9febb169ed2e54c23623e7786ee629 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABE28_022280 ca9febb169ed2e54c23623e7786ee629 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 256 9.0E-80 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABE28_022280 ca9febb169ed2e54c23623e7786ee629 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 18.038 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABE28_022280 ca9febb169ed2e54c23623e7786ee629 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 261 2.5E-86 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 ABE28_018690 8bced91ea75ce83c10637a4fa342bed6 137 SUPERFAMILY SSF55811 2 131 2.44E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_018690 8bced91ea75ce83c10637a4fa342bed6 137 Gene3D G3DSA:3.90.79.10 1 135 3.8E-30 T 11-10-2018 ABE28_018690 8bced91ea75ce83c10637a4fa342bed6 137 Pfam PF00293 NUDIX domain 6 121 1.4E-13 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_005210 bca01249a8be097042e66acbf63d26b0 145 Gene3D G3DSA:3.40.50.360 9 143 1.7E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_005210 bca01249a8be097042e66acbf63d26b0 145 SUPERFAMILY SSF52218 10 132 1.01E-29 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_005210 bca01249a8be097042e66acbf63d26b0 145 ProSitePatterns PS00201 Flavodoxin signature. 13 29 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 ABE28_005210 bca01249a8be097042e66acbf63d26b0 145 Pfam PF00258 Flavodoxin 13 115 2.6E-21 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABE28_015925 b3ade9e81255e30999e02fdbaf14f4e5 267 Pfam PF00535 Glycosyl transferase family 2 13 122 5.7E-37 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_015925 b3ade9e81255e30999e02fdbaf14f4e5 267 Gene3D G3DSA:3.90.550.10 2 255 8.2E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_015925 b3ade9e81255e30999e02fdbaf14f4e5 267 SUPERFAMILY SSF53448 10 229 1.59E-59 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_021960 ac2dcfa0dbd852699d14675d0fdfa337 556 Pfam PF00246 Zinc carboxypeptidase 85 200 4.4E-19 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021960 ac2dcfa0dbd852699d14675d0fdfa337 556 Gene3D G3DSA:3.40.630.10 61 358 9.9E-35 T 11-10-2018 ABE28_021960 ac2dcfa0dbd852699d14675d0fdfa337 556 SMART SM00631 76 280 4.8E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021960 ac2dcfa0dbd852699d14675d0fdfa337 556 SUPERFAMILY SSF53187 76 336 2.51E-38 T 11-10-2018 ABE28_003065 aaeef3ebf1897240eb0701541466240c 465 PIRSF PIRSF006060 1 464 3.1E-67 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_003065 aaeef3ebf1897240eb0701541466240c 465 Pfam PF00324 Amino acid permease 14 424 3.7E-102 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_003065 aaeef3ebf1897240eb0701541466240c 465 Gene3D G3DSA:1.20.1740.10 5 458 1.4E-59 T 11-10-2018 ABE28_003065 aaeef3ebf1897240eb0701541466240c 465 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_010940 093e598f6742b80644e800a0492174a5 364 Pfam PF03845 Spore germination protein 11 326 1.0E-78 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_010940 093e598f6742b80644e800a0492174a5 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 360 1.2E-78 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_022085 cf066bdfc0456683d814336fe181a0dc 248 PIRSF PIRSF017388 1 246 1.6E-92 T 11-10-2018 IPR012354 Esterase/lipase GO:0052689 ABE28_022085 cf066bdfc0456683d814336fe181a0dc 248 Gene3D G3DSA:3.40.50.1820 1 246 2.3E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_022085 cf066bdfc0456683d814336fe181a0dc 248 SUPERFAMILY SSF53474 12 244 2.56E-39 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_022085 cf066bdfc0456683d814336fe181a0dc 248 Pfam PF12146 Serine aminopeptidase, S33 15 229 1.1E-18 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ABE28_010675 52780f04e12d5596da4e0e4aa96ec3dd 67 Gene3D G3DSA:3.10.20.30 3 67 2.1E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_010675 52780f04e12d5596da4e0e4aa96ec3dd 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 67 5.6E-19 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis ABE28_010675 52780f04e12d5596da4e0e4aa96ec3dd 67 Pfam PF02597 ThiS family 6 67 1.2E-13 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABE28_010675 52780f04e12d5596da4e0e4aa96ec3dd 67 SUPERFAMILY SSF54285 3 66 3.93E-18 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 2 350 2.0E-128 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 Pfam PF04055 Radical SAM superfamily 106 275 2.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 Gene3D G3DSA:3.20.20.70 66 335 7.1E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 Pfam PF13394 4Fe-4S single cluster domain 111 213 1.3E-7 T 11-10-2018 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 SUPERFAMILY SSF102114 97 309 1.88E-14 T 11-10-2018 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 Gene3D G3DSA:1.10.150.530 3 64 1.7E-17 T 11-10-2018 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 PIRSF PIRSF006004 1 355 6.8E-129 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ABE28_023630 5e46c5c9fde8123fce2bba54dcfb1b9b 355 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 350 68.871 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 SMART SM00418 9 90 3.2E-18 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 Pfam PF12840 Helix-turn-helix domain 9 67 5.4E-11 T 11-10-2018 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 SUPERFAMILY SSF46785 8 94 7.33E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 4.1E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 4.1E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 4.1E-9 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_020260 7e2f4dea7825e5af2ece63be12bea7d0 115 Gene3D G3DSA:1.10.10.10 1 110 4.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004630 58c47dd781526cfbf3ba9dd9a3b39cb6 225 Pfam PF02397 Bacterial sugar transferase 31 219 3.2E-70 T 11-10-2018 IPR003362 Bacterial sugar transferase ABE28_004300 03716dba4fd281d9feaba37553c0aa85 150 Pfam PF01381 Helix-turn-helix 7 61 2.0E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_004300 03716dba4fd281d9feaba37553c0aa85 150 SUPERFAMILY SSF47413 1 67 4.1E-20 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_004300 03716dba4fd281d9feaba37553c0aa85 150 SMART SM00530 6 61 2.9E-18 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_004300 03716dba4fd281d9feaba37553c0aa85 150 Gene3D G3DSA:1.10.260.40 1 64 1.1E-23 T 11-10-2018 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 5.5E-29 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 SUPERFAMILY SSF51735 2 163 5.66E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 Gene3D G3DSA:1.10.1040.10 166 294 3.3E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 161 1.8E-41 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 Gene3D G3DSA:3.40.50.720 1 164 3.3E-48 T 11-10-2018 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 11-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 PIRSF PIRSF000103 1 293 6.4E-68 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 ABE28_004455 203ba6ab203c1cbc8e9e2df81a261ec4 295 SUPERFAMILY SSF48179 167 290 4.76E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 SUPERFAMILY SSF46785 8 73 1.31E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 SUPERFAMILY SSF53067 80 375 1.3E-42 T 11-10-2018 ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 Pfam PF00480 ROK family 83 373 2.6E-54 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 Gene3D G3DSA:1.10.10.10 10 76 2.4E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 Gene3D G3DSA:3.30.420.40 203 355 4.3E-83 T 11-10-2018 ABE28_003905 1e514ed0af20fdb0435e4b76e8767364 393 Gene3D G3DSA:3.30.420.40 81 375 4.3E-83 T 11-10-2018 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 Gene3D G3DSA:3.20.20.70 2 295 4.0E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 SUPERFAMILY SSF51569 1 292 6.38E-75 T 11-10-2018 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 SMART SM01130 2 296 3.1E-85 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 2.0E-20 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 2.0E-20 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.0E-20 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 2.0E-20 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 165 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 Pfam PF00701 Dihydrodipicolinate synthetase family 2 293 1.5E-68 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_018945 3cecce29de26d27404e40cdc84cf960c 303 PIRSF PIRSF001365 1 302 1.5E-75 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_021390 6a371991054a872331158d1933d04d32 87 Pfam PF04892 VanZ like family 1 70 5.7E-17 T 11-10-2018 IPR006976 VanZ-like ABE28_013510 12cc6b7b234b8943a7b695bc8a5e257c 190 Gene3D G3DSA:3.40.50.10490 6 190 7.2E-44 T 11-10-2018 ABE28_013510 12cc6b7b234b8943a7b695bc8a5e257c 190 SUPERFAMILY SSF53697 8 189 3.34E-30 T 11-10-2018 ABE28_013510 12cc6b7b234b8943a7b695bc8a5e257c 190 Pfam PF01380 SIS domain 38 160 5.2E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_022865 a4fdb68d45b865c1e4d43a49f4cb72b5 122 Pfam PF03899 ATP synthase I chain 10 105 3.1E-12 T 11-10-2018 IPR005598 ATP synthase protein I ABE28_022865 a4fdb68d45b865c1e4d43a49f4cb72b5 122 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 121 5.0E-25 T 11-10-2018 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Gene3D G3DSA:2.70.98.40 3 242 6.9E-60 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 PIRSF PIRSF036289 1 742 9.0E-212 T 11-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Gene3D G3DSA:1.50.10.10 292 664 7.7E-127 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 6 238 3.5E-52 T 11-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Gene3D G3DSA:2.60.420.10 665 737 7.3E-19 T 11-10-2018 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 299 677 4.2E-132 T 11-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 SUPERFAMILY SSF48208 246 728 2.89E-109 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 SUPERFAMILY SSF74650 4 240 1.66E-51 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABE28_006470 ea02ef5f22c43d14613c7aa86842688f 742 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 681 729 1.8E-13 T 11-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal ABE28_023815 ed71f591e90d1edaa4eaa778db7d7590 70 SUPERFAMILY SSF55174 3 67 4.0E-18 T 11-10-2018 ABE28_023815 ed71f591e90d1edaa4eaa778db7d7590 70 Pfam PF13275 S4 domain 4 67 4.8E-28 T 11-10-2018 ABE28_023815 ed71f591e90d1edaa4eaa778db7d7590 70 Gene3D G3DSA:3.10.290.10 1 68 7.3E-24 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_023815 ed71f591e90d1edaa4eaa778db7d7590 70 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 62 1.5E-30 T 11-10-2018 IPR014330 RNA-binding S4-related,YaaA ABE28_023165 0a890970dd71bb9317fc39904979f6cf 273 Pfam PF08543 Phosphomethylpyrimidine kinase 11 258 1.7E-88 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 ABE28_023165 0a890970dd71bb9317fc39904979f6cf 273 SUPERFAMILY SSF53613 1 263 1.87E-74 T 11-10-2018 IPR029056 Ribokinase-like ABE28_023165 0a890970dd71bb9317fc39904979f6cf 273 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 4 259 9.1E-84 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 ABE28_023165 0a890970dd71bb9317fc39904979f6cf 273 Gene3D G3DSA:3.40.1190.20 1 270 1.1E-91 T 11-10-2018 IPR029056 Ribokinase-like ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 Gene3D G3DSA:3.10.450.50 228 366 1.0E-22 T 11-10-2018 ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 Gene3D G3DSA:3.10.450.50 51 195 4.8E-21 T 11-10-2018 ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 SUPERFAMILY SSF54427 48 190 9.03E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 SUPERFAMILY SSF54427 231 365 6.59E-24 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 Pfam PF07366 SnoaL-like polyketide cyclase 234 362 2.2E-16 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABE28_019220 97546bce17c2487071cc6e6c7779c553 378 Pfam PF07366 SnoaL-like polyketide cyclase 54 179 2.0E-7 T 11-10-2018 IPR009959 Polyketide cyclase SnoaL-like GO:0030638 MetaCyc: PWY-7352|MetaCyc: PWY-7354 ABE28_016410 e1650bc488a12e45993acd4409356761 427 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 422 1.2E-117 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 PIRSF PIRSF001563 1 427 8.4E-144 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 Pfam PF02875 Mur ligase family, glutamate ligase domain 294 364 9.0E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 ABE28_016410 e1650bc488a12e45993acd4409356761 427 SUPERFAMILY SSF53623 3 294 3.32E-88 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 SUPERFAMILY SSF53244 296 423 1.83E-25 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 142 157 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 Pfam PF08245 Mur ligase middle domain 47 273 2.2E-14 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 ABE28_016410 e1650bc488a12e45993acd4409356761 427 Gene3D G3DSA:3.90.190.20 296 426 3.5E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 ABE28_016410 e1650bc488a12e45993acd4409356761 427 Gene3D G3DSA:3.40.1190.10 1 294 1.5E-95 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 SUPERFAMILY SSF51366 19 270 6.12E-70 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.614 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 Gene3D G3DSA:3.20.20.70 2 295 1.9E-144 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 Pfam PF01680 SOR/SNZ family 8 213 1.1E-105 T 11-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 5.9E-153 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_012110 ffb5fe559733dfdaf1c6a667d0d85685 295 PIRSF PIRSF029271 2 295 1.9E-150 T 11-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 258 1.3E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 SUPERFAMILY SSF52540 283 492 6.39E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 Gene3D G3DSA:3.40.50.300 281 502 9.5E-49 T 11-10-2018 ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 Pfam PF00005 ABC transporter 297 440 9.4E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 SUPERFAMILY SSF161098 59 244 2.88E-20 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 Gene3D G3DSA:1.10.3720.10 53 262 3.5E-16 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_004235 1e3d2f1cd9b42d08b727522f185992e1 504 SMART SM00382 305 489 4.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 Pfam PF06445 GyrI-like small molecule binding domain 171 273 3.2E-8 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 Gene3D G3DSA:3.20.80.10 142 274 7.8E-9 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 SUPERFAMILY SSF46955 10 123 6.59E-25 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 SUPERFAMILY SSF55136 149 273 1.41E-20 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 SMART SM00422 10 79 4.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 Gene3D G3DSA:1.10.1660.10 8 141 5.1E-28 T 11-10-2018 ABE28_020140 d5fe324740ad89bb25c0b89b14b63fbb 274 Pfam PF13411 MerR HTH family regulatory protein 10 74 4.7E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_021500 a0060f02bef110239cf62bd7370aa88e 239 Pfam PF03473 MOSC domain 121 235 4.4E-16 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 ABE28_021500 a0060f02bef110239cf62bd7370aa88e 239 Pfam PF03476 MOSC N-terminal beta barrel domain 4 82 3.8E-12 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 ABE28_021500 a0060f02bef110239cf62bd7370aa88e 239 SUPERFAMILY SSF50800 3 235 6.17E-24 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily ABE28_021500 a0060f02bef110239cf62bd7370aa88e 239 Gene3D G3DSA:2.40.33.20 116 239 2.7E-10 T 11-10-2018 ABE28_011370 a775b67c6e932ecf57a91a1de9b10aff 557 PIRSF PIRSF001294 1 557 1.5E-239 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABE28_011370 a775b67c6e932ecf57a91a1de9b10aff 557 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 3 555 3.0E-208 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABE28_011370 a775b67c6e932ecf57a91a1de9b10aff 557 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 1 556 32.434 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABE28_011370 a775b67c6e932ecf57a91a1de9b10aff 557 Pfam PF03814 Potassium-transporting ATPase A subunit 8 554 2.0E-237 T 11-10-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 ABE28_011965 7454bea2b8fb0047dbd4e88ab22dbf16 225 Gene3D G3DSA:3.40.50.720 1 224 7.2E-56 T 11-10-2018 ABE28_011965 7454bea2b8fb0047dbd4e88ab22dbf16 225 SUPERFAMILY SSF51735 1 208 4.69E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011965 7454bea2b8fb0047dbd4e88ab22dbf16 225 Pfam PF13460 NAD(P)H-binding 11 122 4.5E-8 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 Pfam PF00467 KOW motif 5 36 3.0E-9 T 11-10-2018 IPR005824 KOW ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 Gene3D G3DSA:2.30.30.30 1 100 3.0E-42 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 5.6E-29 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 22.666 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 SMART SM00739 2 29 2.2E-6 T 11-10-2018 IPR005824 KOW ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 5.0E-41 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 SUPERFAMILY SSF50104 1 99 2.26E-38 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily ABE28_000640 f2b36322cb6c82b7be7c4d7d0264ec14 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_016915 a958ba223f92c9ba64597556c92deefe 210 Pfam PF02659 Putative manganese efflux pump 118 207 1.4E-10 T 11-10-2018 IPR003810 Putative manganese efflux pump ABE28_016915 a958ba223f92c9ba64597556c92deefe 210 Pfam PF02659 Putative manganese efflux pump 2 80 2.3E-10 T 11-10-2018 IPR003810 Putative manganese efflux pump ABE28_016915 a958ba223f92c9ba64597556c92deefe 210 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 4 210 1.2E-71 T 11-10-2018 IPR014205 Sporulation protein YtaF ABE28_005815 038638b867b0d38ad465773b066d8330 514 ProSitePatterns PS00455 Putative AMP-binding domain signature. 173 184 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_005815 038638b867b0d38ad465773b066d8330 514 Gene3D G3DSA:3.40.50.12780 1 411 1.3E-126 T 11-10-2018 ABE28_005815 038638b867b0d38ad465773b066d8330 514 Gene3D G3DSA:3.30.300.310 414 514 2.3E-34 T 11-10-2018 ABE28_005815 038638b867b0d38ad465773b066d8330 514 SUPERFAMILY SSF56801 4 511 3.01E-164 T 11-10-2018 ABE28_005815 038638b867b0d38ad465773b066d8330 514 PRINTS PR00154 AMP-binding signature 168 179 6.6E-5 T 11-10-2018 IPR020459 AMP-binding ABE28_005815 038638b867b0d38ad465773b066d8330 514 PRINTS PR00154 AMP-binding signature 180 188 6.6E-5 T 11-10-2018 IPR020459 AMP-binding ABE28_005815 038638b867b0d38ad465773b066d8330 514 Pfam PF13193 AMP-binding enzyme C-terminal domain 427 501 8.0E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_005815 038638b867b0d38ad465773b066d8330 514 Pfam PF00501 AMP-binding enzyme 9 418 1.5E-115 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_006390 3c0e02ad82ceebec8192786e6d7d4e8a 317 Pfam PF01170 Putative RNA methylase family UPF0020 158 260 1.2E-7 T 11-10-2018 IPR000241 Putative RNA methylase domain ABE28_006390 3c0e02ad82ceebec8192786e6d7d4e8a 317 SUPERFAMILY SSF53335 160 268 1.22E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_006390 3c0e02ad82ceebec8192786e6d7d4e8a 317 Gene3D G3DSA:3.40.50.150 155 317 7.2E-20 T 11-10-2018 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 Pfam PF00245 Alkaline phosphatase 10 431 2.6E-92 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 SMART SM00098 10 433 6.0E-79 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 PRINTS PR00113 Alkaline phosphatase signature 141 151 1.7E-38 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 PRINTS PR00113 Alkaline phosphatase signature 59 74 1.7E-38 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 PRINTS PR00113 Alkaline phosphatase signature 96 116 1.7E-38 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 PRINTS PR00113 Alkaline phosphatase signature 214 243 1.7E-38 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 PRINTS PR00113 Alkaline phosphatase signature 9 29 1.7E-38 T 11-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 ABE28_022600 123d75b71f185ebb61ca04cac6cf5456 445 SUPERFAMILY SSF53649 4 432 3.27E-110 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 ABE28_017600 fb3208d029d1f2207be571bdc951e9bb 648 Pfam PF02687 FtsX-like permease family 85 178 9.1E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_017600 fb3208d029d1f2207be571bdc951e9bb 648 PIRSF PIRSF018968 1 648 8.5E-148 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 ABE28_021855 1cdf56bb532da2120e9672fd89ae3f7a 307 Gene3D G3DSA:1.10.3470.10 35 278 3.3E-10 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021855 1cdf56bb532da2120e9672fd89ae3f7a 307 SUPERFAMILY SSF81345 16 272 4.32E-31 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021855 1cdf56bb532da2120e9672fd89ae3f7a 307 Pfam PF00950 ABC 3 transport family 11 274 7.1E-72 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ABE28_016570 40aa48523428df741d9d451e7fa323bf 118 Gene3D G3DSA:3.40.1440.10 16 118 3.0E-18 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_016570 40aa48523428df741d9d451e7fa323bf 118 SUPERFAMILY SSF82771 18 115 1.31E-7 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_016570 40aa48523428df741d9d451e7fa323bf 118 Pfam PF01541 GIY-YIG catalytic domain 18 113 2.9E-5 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_005915 011b1f79285c363bf3ddbaf9eb18bee0 115 Pfam PF07457 Protein of unknown function (DUF1516) 3 104 9.1E-32 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 ABE28_005915 011b1f79285c363bf3ddbaf9eb18bee0 115 Hamap MF_01536 UPF0344 protein . 2 114 14.996 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 ABE28_005915 011b1f79285c363bf3ddbaf9eb18bee0 115 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 4 114 7.0E-23 T 11-10-2018 IPR010899 Protein of unknown function UPF0344 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 Gene3D G3DSA:3.90.180.10 11 318 2.4E-109 T 11-10-2018 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 Gene3D G3DSA:3.40.50.720 123 268 2.4E-109 T 11-10-2018 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 Pfam PF00107 Zinc-binding dehydrogenase 151 273 5.0E-36 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 140 161 - T 11-10-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 SUPERFAMILY SSF50129 1 149 6.7E-39 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 87 1.8E-12 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 SUPERFAMILY SSF51735 112 270 7.34E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006880 887a392b374e123ded8ecf1cb9a66401 325 SMART SM00829 10 322 9.3E-57 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 308 322 2.1E-7 T 11-10-2018 IPR003004 GspF/PilC family ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 106 134 2.1E-7 T 11-10-2018 IPR003004 GspF/PilC family ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 PRINTS PR00812 Bacterial general secretion pathway protein F signature 324 343 2.1E-7 T 11-10-2018 IPR003004 GspF/PilC family ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 Gene3D G3DSA:1.20.81.30 197 307 2.3E-13 T 11-10-2018 ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 106 134 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 Gene3D G3DSA:1.20.81.30 1 111 2.7E-14 T 11-10-2018 ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 Pfam PF00482 Type II secretion system (T2SS), protein F 14 134 2.0E-15 T 11-10-2018 IPR018076 Type II secretion system F domain ABE28_015125 2b8a7710b4b4877eaba3bedfc2138b1c 343 Pfam PF00482 Type II secretion system (T2SS), protein F 213 335 3.0E-18 T 11-10-2018 IPR018076 Type II secretion system F domain ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 Gene3D G3DSA:2.10.109.10 89 210 1.9E-30 T 11-10-2018 ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 SMART SM00530 6 61 1.5E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 Pfam PF01381 Helix-turn-helix 7 60 6.2E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 Pfam PF00717 Peptidase S24-like 124 180 8.0E-12 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 SUPERFAMILY SSF51306 84 208 2.09E-24 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 SUPERFAMILY SSF47413 1 66 3.58E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_009915 c7d0cae028975cb826bba8428b1e6a08 212 Gene3D G3DSA:1.10.260.40 1 85 8.5E-18 T 11-10-2018 ABE28_012665 7630701ebea552d145b13b248c00d53f 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 107 1.6E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_012665 7630701ebea552d145b13b248c00d53f 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 156 279 2.7E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_012665 7630701ebea552d145b13b248c00d53f 325 Gene3D G3DSA:3.10.180.10 4 318 2.1E-117 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012665 7630701ebea552d145b13b248c00d53f 325 Gene3D G3DSA:3.10.180.10 65 223 2.1E-117 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_012665 7630701ebea552d145b13b248c00d53f 325 SUPERFAMILY SSF54593 1 295 9.42E-50 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SUPERFAMILY SSF54637 335 437 1.25E-20 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Pfam PF00571 CBS domain 253 307 1.1E-6 T 11-10-2018 IPR000644 CBS domain ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Pfam PF00571 CBS domain 219 244 5.1E-5 T 11-10-2018 IPR000644 CBS domain ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SUPERFAMILY SSF75138 72 185 8.37E-28 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SUPERFAMILY SSF46785 5 54 1.4E-6 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Pfam PF07085 DRTGG domain 76 178 2.4E-29 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Gene3D G3DSA:3.40.1390.20 71 178 7.5E-25 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SMART SM00116 200 248 0.94 T 11-10-2018 IPR000644 CBS domain ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SMART SM00116 259 307 0.0012 T 11-10-2018 IPR000644 CBS domain ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Pfam PF03061 Thioesterase superfamily 353 425 7.5E-11 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Gene3D G3DSA:3.10.580.10 185 314 1.1E-21 T 11-10-2018 ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Gene3D G3DSA:3.10.129.10 321 438 2.8E-12 T 11-10-2018 ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Gene3D G3DSA:1.10.10.10 4 70 1.3E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 SUPERFAMILY SSF54631 182 306 4.67E-29 T 11-10-2018 ABE28_017045 8c76415ecbed19c264353d2e58f8beb4 439 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 58 1.0E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_016720 a68f736adf0d335dd6e0bbd04886ee56 135 Pfam PF03994 Domain of Unknown Function (DUF350) 18 68 1.6E-13 T 11-10-2018 IPR007140 Protein of unknown function DUF350 ABE28_016720 a68f736adf0d335dd6e0bbd04886ee56 135 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 3.1E-15 T 11-10-2018 IPR007140 Protein of unknown function DUF350 ABE28_003480 eea11a88f7716b4e1ae0290c761ccd3d 183 Pfam PF08006 Protein of unknown function (DUF1700) 1 179 1.7E-53 T 11-10-2018 IPR012963 Protein of unknown function DUF1700 ABE28_007020 d9a2a533a46858e6e550ec97a3ad4276 167 Pfam PF14177 YkyB-like protein 15 143 2.0E-53 T 11-10-2018 IPR025552 YkyB-like protein ABE28_021400 7085109f8a2c48b25902b4923775e178 223 SMART SM00382 29 222 2.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_021400 7085109f8a2c48b25902b4923775e178 223 SUPERFAMILY SSF52540 4 216 6.19E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021400 7085109f8a2c48b25902b4923775e178 223 Gene3D G3DSA:3.40.50.300 2 219 1.0E-53 T 11-10-2018 ABE28_021400 7085109f8a2c48b25902b4923775e178 223 Pfam PF00005 ABC transporter 20 166 3.1E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_021400 7085109f8a2c48b25902b4923775e178 223 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 309 1.7E-137 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 220 309 8.1E-37 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 309 72.639 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 4.0E-31 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 Gene3D G3DSA:3.40.47.10 1 311 2.7E-136 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_006095 eeb3962b8f59df2f4a760fc939712dec 311 SUPERFAMILY SSF53901 3 309 3.89E-74 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 Gene3D G3DSA:3.40.1160.10 1 289 1.4E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 Pfam PF00696 Amino acid kinase family 2 276 2.3E-38 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 Gene3D G3DSA:3.30.2130.10 290 448 1.1E-55 T 11-10-2018 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 SUPERFAMILY SSF55021 370 448 3.87E-21 T 11-10-2018 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 SUPERFAMILY SSF55021 296 358 4.58E-9 T 11-10-2018 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 1.4E-78 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 Pfam PF13840 ACT domain 380 444 1.7E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 PIRSF PIRSF000726 1 448 3.7E-74 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_002345 0c8a645ad6678346e8c287372a9c09d4 448 SUPERFAMILY SSF53633 1 289 2.49E-63 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_018170 bb66c1ac3d8baf35f4520f8cbdbf4d19 152 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 124 8.5E-9 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_018170 bb66c1ac3d8baf35f4520f8cbdbf4d19 152 Gene3D G3DSA:3.10.180.10 1 137 2.3E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_018170 bb66c1ac3d8baf35f4520f8cbdbf4d19 152 SUPERFAMILY SSF54593 1 130 5.5E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_010475 5ea66a171a1ffdaf331d0cb5a8da7401 73 Pfam PF01337 Barstar (barnase inhibitor) 45 73 7.8E-6 T 11-10-2018 IPR000468 Barstar (barnase inhibitor) ABE28_008620 176da29eab6c8285a0472cc0085c799b 108 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 45 99 3.3E-5 T 11-10-2018 IPR008792 Coenzyme PQQ synthesis D ABE28_019450 8fa8f7b34e22cc46a7f8dd8c7ba2c770 306 Gene3D G3DSA:1.10.3720.10 87 302 2.2E-26 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019450 8fa8f7b34e22cc46a7f8dd8c7ba2c770 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 303 2.9E-42 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019450 8fa8f7b34e22cc46a7f8dd8c7ba2c770 306 SUPERFAMILY SSF161098 91 292 1.23E-22 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017915 cde3c8bc458b200a16e9d5fefa85979d 113 Pfam PF00893 Small Multidrug Resistance protein 4 92 1.2E-21 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABE28_017915 cde3c8bc458b200a16e9d5fefa85979d 113 Gene3D G3DSA:1.10.3730.20 3 107 5.9E-23 T 11-10-2018 ABE28_017915 cde3c8bc458b200a16e9d5fefa85979d 113 SUPERFAMILY SSF103481 8 100 1.7E-13 T 11-10-2018 ABE28_009875 736bfa334801f1411e10aceb068ba4d8 115 Pfam PF00893 Small Multidrug Resistance protein 4 94 5.4E-28 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABE28_009875 736bfa334801f1411e10aceb068ba4d8 115 Gene3D G3DSA:1.10.3730.20 1 109 1.0E-35 T 11-10-2018 ABE28_009875 736bfa334801f1411e10aceb068ba4d8 115 SUPERFAMILY SSF103481 7 105 1.06E-20 T 11-10-2018 ABE28_005975 a055c4a0c0ce5c0874bece1fca6638af 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 3.2E-19 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_005975 a055c4a0c0ce5c0874bece1fca6638af 280 PIRSF PIRSF006483 1 280 1.1E-95 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_005975 a055c4a0c0ce5c0874bece1fca6638af 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 1.3E-61 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_005975 a055c4a0c0ce5c0874bece1fca6638af 280 Gene3D G3DSA:3.30.70.120 191 267 3.7E-21 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_012635 7d3fdcd58b8d33787fd0f774343ba95d 87 Gene3D G3DSA:1.20.58.1000 2 86 4.7E-24 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ABE28_012635 7d3fdcd58b8d33787fd0f774343ba95d 87 Pfam PF02583 Metal-sensitive transcriptional repressor 4 83 2.1E-25 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 Gene3D G3DSA:3.40.50.2300 76 324 7.2E-76 T 11-10-2018 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 Gene3D G3DSA:1.10.260.40 1 60 9.3E-23 T 11-10-2018 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 Gene3D G3DSA:3.40.50.2300 167 296 7.2E-76 T 11-10-2018 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 SUPERFAMILY SSF47413 3 60 8.7E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 SUPERFAMILY SSF53822 62 336 3.43E-72 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 SMART SM00354 2 72 3.7E-30 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.2E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_005950 146cdb7ce6392d059e4737d0fee19483 348 Pfam PF13377 Periplasmic binding protein-like domain 175 335 5.1E-34 T 11-10-2018 ABE28_012595 53550e5aa261dba3f48e4b0c61c07f32 328 Pfam PF02719 Polysaccharide biosynthesis protein 7 279 3.2E-102 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_012595 53550e5aa261dba3f48e4b0c61c07f32 328 Gene3D G3DSA:3.40.50.720 4 307 4.2E-118 T 11-10-2018 ABE28_012595 53550e5aa261dba3f48e4b0c61c07f32 328 Gene3D G3DSA:3.90.25.30 165 309 4.2E-118 T 11-10-2018 ABE28_012595 53550e5aa261dba3f48e4b0c61c07f32 328 SUPERFAMILY SSF51735 5 260 4.25E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012890 f1b3a82508b9216f211320a47c4a0c3f 244 SUPERFAMILY SSF57997 64 222 4.32E-5 T 11-10-2018 ABE28_012890 f1b3a82508b9216f211320a47c4a0c3f 244 Gene3D G3DSA:1.20.5.170 70 121 4.4E-6 T 11-10-2018 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 Gene3D G3DSA:3.30.70.1450 332 403 6.5E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 SUPERFAMILY SSF116726 230 307 1.7E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 Pfam PF02080 TrkA-C domain 333 399 1.7E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 Pfam PF02080 TrkA-C domain 232 307 7.5E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 Gene3D G3DSA:3.30.70.1450 219 307 1.2E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 Pfam PF03600 Citrate transporter 16 565 4.2E-54 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABE28_007045 beff3f04103af85fc57aace2ccb769ca 618 SUPERFAMILY SSF116726 322 403 4.71E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_001070 1828d6b8497ec8d6f54dd6a4cafabfe0 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 258 2.4E-16 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_001070 1828d6b8497ec8d6f54dd6a4cafabfe0 267 Gene3D G3DSA:1.10.3720.10 8 262 9.3E-42 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_001070 1828d6b8497ec8d6f54dd6a4cafabfe0 267 SUPERFAMILY SSF161098 8 254 8.5E-50 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 Pfam PF00672 HAMP domain 202 253 6.3E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 171 3.9E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 SMART SM00304 202 256 2.2E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 383 410 1.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 412 441 1.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 1 13 1.9E-19 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 Gene3D G3DSA:1.20.1480.50 164 260 7.3E-10 T 11-10-2018 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 SUPERFAMILY SSF58104 224 560 1.27E-67 T 11-10-2018 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 SMART SM00283 285 560 4.7E-79 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 Gene3D G3DSA:1.10.287.950 298 560 6.3E-60 T 11-10-2018 ABE28_018665 03b6e3e4cb389a6f4be33f1d9cbddb6d 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 330 510 3.8E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 SUPERFAMILY SSF50465 303 395 3.17E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 394 3.0E-233 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 8.9E-18 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 SUPERFAMILY SSF52540 9 226 6.85E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 146 6.7E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.7E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.338 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Gene3D G3DSA:2.40.30.10 206 335 1.7E-53 T 11-10-2018 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 SUPERFAMILY SSF50447 203 302 1.2E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Gene3D G3DSA:3.40.50.300 2 203 8.2E-71 T 11-10-2018 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 3.4E-60 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Gene3D G3DSA:2.40.30.10 339 393 5.1E-27 T 11-10-2018 ABE28_000575 434b97086c617a4cedbbf764c6cbb840 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 6.5E-34 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal ABE28_005805 2713ac4f0a71ea4e0b2c892b6194092e 244 Pfam PF12706 Beta-lactamase superfamily domain 30 211 4.2E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_005805 2713ac4f0a71ea4e0b2c892b6194092e 244 Gene3D G3DSA:3.60.15.10 1 243 4.6E-85 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005805 2713ac4f0a71ea4e0b2c892b6194092e 244 SUPERFAMILY SSF56281 1 243 2.62E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005805 2713ac4f0a71ea4e0b2c892b6194092e 244 SMART SM00849 18 211 1.3E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 TIGRFAM TIGR00109 hemH: ferrochelatase 1 308 1.7E-97 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 Gene3D G3DSA:3.40.50.1400 148 289 8.0E-105 T 11-10-2018 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 Hamap MF_00323 Ferrochelatase [hemH]. 4 308 31.654 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 Pfam PF00762 Ferrochelatase 5 307 4.9E-80 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 SUPERFAMILY SSF53800 3 308 8.99E-87 T 11-10-2018 ABE28_005790 46e3fc4b30e22ed5074c44c2da43d910 311 Gene3D G3DSA:3.40.50.1400 8 304 8.0E-105 T 11-10-2018 ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 SMART SM00382 33 242 1.6E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 Pfam PF00005 ABC transporter 25 184 3.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 SUPERFAMILY SSF52540 32 320 1.5E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 4.7E-20 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 Gene3D G3DSA:3.40.50.300 1 335 1.5E-103 T 11-10-2018 ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_012315 77fbc3eb40f4b04decaa1c2132a8650e 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 2.0E-27 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_015435 f6f24a12048d14c9b560fb89227dc385 320 Pfam PF02562 PhoH-like protein 113 316 3.0E-97 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 ABE28_015435 f6f24a12048d14c9b560fb89227dc385 320 Gene3D G3DSA:3.40.50.300 109 316 1.4E-77 T 11-10-2018 ABE28_015435 f6f24a12048d14c9b560fb89227dc385 320 SUPERFAMILY SSF52540 112 291 4.62E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023225 59c267c77c8e9cf54a05f51622e348ea 194 Gene3D G3DSA:1.20.1200.10 12 194 1.4E-64 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_023225 59c267c77c8e9cf54a05f51622e348ea 194 SUPERFAMILY SSF89028 1 179 3.34E-62 T 11-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_023225 59c267c77c8e9cf54a05f51622e348ea 194 Pfam PF01923 Cobalamin adenosyltransferase 3 167 5.5E-57 T 11-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_023225 59c267c77c8e9cf54a05f51622e348ea 194 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 2.4E-60 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_023225 59c267c77c8e9cf54a05f51622e348ea 194 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 180 3.0E-59 T 11-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 ABE28_016675 4061341f7024c625d6b4cd2ea9194176 151 Pfam PF10702 Protein of unknown function (DUF2507) 22 144 1.0E-46 T 11-10-2018 IPR019642 Protein of unknown function DUF2507 ABE28_016675 4061341f7024c625d6b4cd2ea9194176 151 SUPERFAMILY SSF111126 11 130 1.05E-22 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily ABE28_016675 4061341f7024c625d6b4cd2ea9194176 151 Gene3D G3DSA:3.30.1380.20 1 151 1.0E-54 T 11-10-2018 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Hamap MF_00577 Urocanate hydratase [hutU]. 5 552 50.522 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 TIGRFAM TIGR01228 hutU: urocanate hydratase 11 550 5.3E-298 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Gene3D G3DSA:3.40.50.10730 138 345 7.2E-256 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Gene3D G3DSA:3.40.1770.10 16 538 7.2E-256 T 11-10-2018 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 SUPERFAMILY SSF111326 5 552 3.14E-258 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Pfam PF01175 Urocanase Rossmann-like domain 137 345 5.5E-89 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Pfam PF17391 Urocanase N-terminal domain 11 134 1.8E-61 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 PIRSF PIRSF001423 1 557 3.1E-295 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_010525 fbcba515e37f9754fa18a392e0a73783 558 Pfam PF17392 Urocanase C-terminal domain 348 542 3.7E-95 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 Gene3D G3DSA:4.10.640.10 3 78 5.5E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 SUPERFAMILY SSF46911 4 77 6.67E-30 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 4.4E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 11 77 1.5E-36 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 26 77 5.0E-21 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 Pfam PF01084 Ribosomal protein S18 23 73 7.2E-27 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023720 25bc980f70b8b49214e85679636aef2e 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.155 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_003535 df5d7e96195597b77227b0b54af5e507 218 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 1.5E-26 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_003535 df5d7e96195597b77227b0b54af5e507 218 SUPERFAMILY SSF161098 13 201 7.06E-48 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003535 df5d7e96195597b77227b0b54af5e507 218 Gene3D G3DSA:1.10.3720.10 1 217 2.0E-60 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003535 df5d7e96195597b77227b0b54af5e507 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 216 1.3E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 SUPERFAMILY SSF56796 2 385 5.63E-116 T 11-10-2018 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 365 2.4E-101 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 Gene3D G3DSA:3.40.50.1970 1 184 5.9E-56 T 11-10-2018 ABE28_021320 63e68057ddab5018a768d8a12b4a80e6 387 Gene3D G3DSA:1.20.1090.10 185 386 3.8E-45 T 11-10-2018 ABE28_013305 776249712b6e43f9020f95989db8fbf4 354 SUPERFAMILY SSF52266 40 218 3.05E-23 T 11-10-2018 ABE28_013305 776249712b6e43f9020f95989db8fbf4 354 Gene3D G3DSA:2.60.120.260 252 331 3.6E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily ABE28_013305 776249712b6e43f9020f95989db8fbf4 354 Gene3D G3DSA:3.40.50.1110 42 221 6.2E-21 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_013305 776249712b6e43f9020f95989db8fbf4 354 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 45 205 1.6E-13 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 248 6.9E-98 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 184 200 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 Gene3D G3DSA:3.60.10.10 1 249 1.9E-93 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 4.6E-21 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 248 2.6E-96 T 11-10-2018 ABE28_011995 11ad2dff7ff219056cc241a617854d31 251 SUPERFAMILY SSF56219 1 248 3.27E-80 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABE28_018870 c328895f15453c04ab1aa1c32896fd90 779 SUPERFAMILY SSF52540 202 767 2.5E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018870 c328895f15453c04ab1aa1c32896fd90 779 Pfam PF13361 UvrD-like helicase C-terminal domain 605 692 2.4E-7 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 ABE28_018870 c328895f15453c04ab1aa1c32896fd90 779 Gene3D G3DSA:3.40.50.300 608 777 6.1E-58 T 11-10-2018 ABE28_018870 c328895f15453c04ab1aa1c32896fd90 779 Pfam PF13538 UvrD-like helicase C-terminal domain 714 754 9.1E-8 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain ABE28_018870 c328895f15453c04ab1aa1c32896fd90 779 Pfam PF13245 AAA domain 214 582 1.3E-10 T 11-10-2018 ABE28_023405 c523e485c1a6ed97261642927c5d76b5 221 SUPERFAMILY SSF161098 16 202 7.85E-48 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_023405 c523e485c1a6ed97261642927c5d76b5 221 Gene3D G3DSA:1.10.3720.10 6 219 4.6E-57 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_023405 c523e485c1a6ed97261642927c5d76b5 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 17 111 2.1E-27 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_023405 c523e485c1a6ed97261642927c5d76b5 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 217 6.2E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 SMART SM01130 3 290 2.1E-128 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 6.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 6.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 6.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 6.0E-33 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 7 288 2.5E-105 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 1.4E-105 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 Gene3D G3DSA:3.20.20.70 1 289 2.7E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 PIRSF PIRSF001365 1 290 1.1E-96 T 11-10-2018 IPR002220 DapA-like GO:0016829 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 SUPERFAMILY SSF51569 1 288 5.44E-99 T 11-10-2018 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 40 57 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_008235 9a30c79553cb590448202ea0d60bac42 290 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 3 289 61.797 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 ABE28_003560 582a1ba1d9176c8be960c6f3ef0dd4f3 144 Pfam PF13411 MerR HTH family regulatory protein 2 66 2.5E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_003560 582a1ba1d9176c8be960c6f3ef0dd4f3 144 SUPERFAMILY SSF46955 2 116 1.1E-24 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_003560 582a1ba1d9176c8be960c6f3ef0dd4f3 144 Gene3D G3DSA:1.10.1660.10 1 136 8.9E-30 T 11-10-2018 ABE28_003560 582a1ba1d9176c8be960c6f3ef0dd4f3 144 SMART SM00422 2 70 5.7E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_002595 f398470b8d818d2739736b81de541994 388 Gene3D G3DSA:3.10.310.30 248 301 3.1E-10 T 11-10-2018 ABE28_002595 f398470b8d818d2739736b81de541994 388 Pfam PF02272 DHHA1 domain 256 299 8.7E-6 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_002595 f398470b8d818d2739736b81de541994 388 SUPERFAMILY SSF64182 4 298 6.54E-29 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_012085 b7082ea03aa03128439097f7980b4356 382 Pfam PF14306 PUA-like domain 6 154 2.2E-46 T 11-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012085 b7082ea03aa03128439097f7980b4356 382 Pfam PF01747 ATP-sulfurylase 165 373 1.6E-93 T 11-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012085 b7082ea03aa03128439097f7980b4356 382 SUPERFAMILY SSF88697 5 158 4.28E-45 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_012085 b7082ea03aa03128439097f7980b4356 382 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 6 373 2.9E-134 T 11-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 ABE28_012085 b7082ea03aa03128439097f7980b4356 382 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 21 377 49.474 T 11-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 ABE28_012085 b7082ea03aa03128439097f7980b4356 382 Gene3D G3DSA:3.10.400.10 4 154 1.3E-43 T 11-10-2018 ABE28_012085 b7082ea03aa03128439097f7980b4356 382 Gene3D G3DSA:3.40.50.620 165 375 7.5E-96 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_012085 b7082ea03aa03128439097f7980b4356 382 SUPERFAMILY SSF52374 165 375 1.31E-86 T 11-10-2018 ABE28_010340 8e775f13930ec3f948ec191fce67cb0f 383 Pfam PF01098 Cell cycle protein 14 376 1.1E-93 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_010340 8e775f13930ec3f948ec191fce67cb0f 383 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_014070 87d1f77fc3279f17aa920690dc599c6c 264 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 49 252 2.4E-46 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_014070 87d1f77fc3279f17aa920690dc599c6c 264 TIGRFAM TIGR02305 HpaG-N-term: 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit 47 252 3.1E-82 T 11-10-2018 IPR012686 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase, N-terminal subunit GO:0008704|GO:0018800 KEGG: 00350+5.3.3.10+4.1.1.68 ABE28_014070 87d1f77fc3279f17aa920690dc599c6c 264 Gene3D G3DSA:3.90.850.10 45 259 7.7E-52 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_014070 87d1f77fc3279f17aa920690dc599c6c 264 SUPERFAMILY SSF56529 47 256 1.7E-52 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_018045 24c0611d65bca52bc60c280c6e882d9b 317 Gene3D G3DSA:1.10.3720.10 87 303 9.8E-30 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018045 24c0611d65bca52bc60c280c6e882d9b 317 SUPERFAMILY SSF161098 93 291 3.53E-22 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_018045 24c0611d65bca52bc60c280c6e882d9b 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 307 4.7E-44 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_001145 5d27dbbc79117289cc8a3feb435542a2 289 Gene3D G3DSA:3.40.50.1820 25 281 7.4E-74 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_001145 5d27dbbc79117289cc8a3feb435542a2 289 Pfam PF00756 Putative esterase 33 241 1.2E-20 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 ABE28_001145 5d27dbbc79117289cc8a3feb435542a2 289 SUPERFAMILY SSF53474 20 281 6.24E-58 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 Gene3D G3DSA:3.40.50.12780 67 523 1.1E-68 T 11-10-2018 ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 41 97 3.9E-13 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 SUPERFAMILY SSF56801 41 632 2.22E-126 T 11-10-2018 ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 Pfam PF00501 AMP-binding enzyme 100 529 2.8E-53 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 ProSitePatterns PS00455 Putative AMP-binding domain signature. 271 282 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 Pfam PF13193 AMP-binding enzyme C-terminal domain 544 616 2.4E-7 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 8 654 8.9E-260 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 ABE28_011490 22b39a6594804e6a89a2d4025fa69b28 662 Gene3D G3DSA:3.30.300.30 526 648 1.9E-13 T 11-10-2018 ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 Pfam PF09318 Glycosyl transferase 1 domain A 13 198 1.8E-27 T 11-10-2018 IPR015397 Glycosyl transferase 1, domain A ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 Gene3D G3DSA:3.40.50.2000 186 331 4.9E-32 T 11-10-2018 ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 Gene3D G3DSA:3.40.50.2000 5 173 3.3E-24 T 11-10-2018 ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 Pfam PF00534 Glycosyl transferases group 1 328 486 1.6E-37 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 SUPERFAMILY SSF53756 224 511 2.46E-48 T 11-10-2018 ABE28_020715 b773b7ddafdaf704f47bb1983a2ff611 522 Gene3D G3DSA:3.40.50.2000 332 493 4.5E-43 T 11-10-2018 ABE28_013710 d9383b143efb0b25638cb2369cd868b5 385 Gene3D G3DSA:3.30.420.40 8 374 9.3E-133 T 11-10-2018 ABE28_013710 d9383b143efb0b25638cb2369cd868b5 385 SUPERFAMILY SSF53067 1 329 1.18E-20 T 11-10-2018 ABE28_013710 d9383b143efb0b25638cb2369cd868b5 385 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 1 377 1.2E-108 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ABE28_013710 d9383b143efb0b25638cb2369cd868b5 385 Gene3D G3DSA:3.30.420.40 149 339 9.3E-133 T 11-10-2018 ABE28_013710 d9383b143efb0b25638cb2369cd868b5 385 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 1 379 38.265 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 ABE28_021555 f439e3c4fecf9cbb454470f488f43e56 105 Pfam PF14068 Putative membrane protein 6 105 2.4E-41 T 11-10-2018 IPR025917 Putative membrane protein YuiB ABE28_015585 e097d6dbb7b35391d26e0912ed43e42f 247 Gene3D G3DSA:3.40.50.150 5 245 2.2E-83 T 11-10-2018 ABE28_015585 e097d6dbb7b35391d26e0912ed43e42f 247 Gene3D G3DSA:2.20.25.110 143 206 2.2E-83 T 11-10-2018 ABE28_015585 e097d6dbb7b35391d26e0912ed43e42f 247 Pfam PF13649 Methyltransferase domain 40 135 1.4E-19 T 11-10-2018 ABE28_015585 e097d6dbb7b35391d26e0912ed43e42f 247 SUPERFAMILY SSF53335 3 247 1.94E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 16 295 5.6E-130 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 18 258 3.8E-54 T 11-10-2018 ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 296 48.309 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 SUPERFAMILY SSF51621 12 294 2.02E-98 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_000955 2ef71f41aa16288db0e4d7e0e3b5fa85 302 Gene3D G3DSA:3.20.20.60 1 302 1.8E-111 T 11-10-2018 ABE28_013465 eac3f151870ad92cd41e7131278f0235 231 SUPERFAMILY SSF51219 28 226 5.75E-56 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily ABE28_013465 eac3f151870ad92cd41e7131278f0235 231 Gene3D G3DSA:3.60.160.10 12 228 1.7E-31 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily ABE28_013465 eac3f151870ad92cd41e7131278f0235 231 Pfam PF01987 Mitochondrial biogenesis AIM24 27 220 6.0E-37 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 SMART SM00895 99 226 1.1E-18 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 SUPERFAMILY SSF46785 4 78 3.91E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 SMART SM00345 15 74 8.0E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.1E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 1.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 1.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 Gene3D G3DSA:1.10.10.10 1 74 1.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 SUPERFAMILY SSF48008 95 231 4.97E-24 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 Gene3D G3DSA:1.20.120.530 94 243 9.7E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_016810 de03593ab6dce557dffb729d8a34015d 243 Pfam PF07729 FCD domain 100 225 9.8E-21 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_015750 3977a413a3014987c23ed722e78e5533 358 Pfam PF01594 AI-2E family transporter 13 344 2.3E-73 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_020145 e373dbe19f1eb039f4701f6f19cdc747 149 SUPERFAMILY SSF55729 1 142 1.1E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_020145 e373dbe19f1eb039f4701f6f19cdc747 149 Gene3D G3DSA:3.40.630.30 44 148 3.8E-26 T 11-10-2018 ABE28_020145 e373dbe19f1eb039f4701f6f19cdc747 149 Pfam PF00583 Acetyltransferase (GNAT) family 46 131 1.4E-18 T 11-10-2018 IPR000182 GNAT domain ABE28_020145 e373dbe19f1eb039f4701f6f19cdc747 149 Gene3D G3DSA:1.10.287.900 1 40 7.0E-7 T 11-10-2018 IPR027455 Spermine/spermidine acetyltransferase, N-terminal KEGG: 00330+2.3.1.57|MetaCyc: PWY-0|MetaCyc: PWY-6117|MetaCyc: PWY-6922 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SUPERFAMILY SSF51055 453 493 5.36E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SUPERFAMILY SSF81296 31 207 3.36E-52 T 11-10-2018 IPR014756 Immunoglobulin E-set ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Gene3D G3DSA:2.60.40.10 216 302 3.5E-19 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Gene3D G3DSA:2.60.40.10 310 396 2.6E-21 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 31 205 2.1E-35 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Gene3D G3DSA:2.70.50.50 31 208 1.8E-72 T 11-10-2018 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SUPERFAMILY SSF51055 406 448 1.7E-13 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Pfam PF02839 Carbohydrate binding domain 422 444 6.7E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SMART SM00495 451 493 1.1E-13 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SMART SM00495 405 447 2.4E-12 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Gene3D G3DSA:2.10.10.20 403 450 2.4E-14 T 11-10-2018 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SMART SM00060 218 292 3.2E-4 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SMART SM00060 312 386 1.8E-8 T 11-10-2018 IPR003961 Fibronectin type III GO:0005515 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 SUPERFAMILY SSF49265 217 398 1.64E-22 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABE28_010640 396c54a422f9c3ecf46dc59a9d96359b 495 Gene3D G3DSA:2.10.10.20 451 491 4.6E-14 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 Pfam PF00117 Glutamine amidotransferase class-I 3 185 7.5E-52 T 11-10-2018 IPR017926 Glutamine amidotransferase ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 165 178 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.9E-33 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 SUPERFAMILY SSF52317 1 192 2.72E-50 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 2.6E-13 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 2.6E-13 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00096 Glutamine amidotransferase superfamily signature 165 178 2.6E-13 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 185 5.4E-70 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.8E-7 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.8E-7 T 11-10-2018 ABE28_007200 40c10e648380fb0a4976fbe086116d28 201 Gene3D G3DSA:3.40.50.880 1 190 5.5E-60 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 Pfam PF02445 Quinolinate synthetase A protein 34 366 2.7E-105 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 Gene3D G3DSA:3.40.50.10800 112 366 3.9E-81 T 11-10-2018 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 Gene3D G3DSA:3.40.50.10800 230 317 3.9E-81 T 11-10-2018 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 Gene3D G3DSA:3.40.50.10800 39 348 3.9E-81 T 11-10-2018 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 Hamap MF_00569 Quinolinate synthase A [nadA]. 22 367 54.73 T 11-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 SUPERFAMILY SSF142754 35 366 2.22E-95 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABE28_016270 113d3166d945ad390b0faa788f79c56a 368 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 21 366 1.1E-114 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABE28_009770 5bcc703ef8d51098cd03e038111b46ba 370 Pfam PF00676 Dehydrogenase E1 component 52 342 4.5E-105 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_009770 5bcc703ef8d51098cd03e038111b46ba 370 Gene3D G3DSA:3.40.50.970 5 370 1.2E-126 T 11-10-2018 ABE28_009770 5bcc703ef8d51098cd03e038111b46ba 370 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 363 2.2E-144 T 11-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 ABE28_009770 5bcc703ef8d51098cd03e038111b46ba 370 SUPERFAMILY SSF52518 19 365 2.68E-105 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_007435 aed5ef641ec9bd0d90bf6171b7a3874c 173 Pfam PF02620 Uncharacterized ACR, COG1399 56 166 5.7E-25 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD ABE28_019050 17f60604525ad6ca195151bdc63198ef 76 Pfam PF13129 Protein of unknown function (DUF3953) 34 71 1.2E-5 T 11-10-2018 IPR025018 Protein of unknown function DUF3953 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 6.3E-21 T 11-10-2018 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 6.1E-8 T 11-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 Gene3D G3DSA:3.30.70.20 2 82 1.2E-33 T 11-10-2018 ABE28_014450 0475adaf7a1ca2b34ad725a67e93b52d 82 SUPERFAMILY SSF54862 4 72 2.31E-13 T 11-10-2018 ABE28_017345 11e02ecac1c45707916678f07d65c471 108 SUPERFAMILY SSF52833 4 94 1.94E-7 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_017345 11e02ecac1c45707916678f07d65c471 108 Gene3D G3DSA:3.40.30.10 1 107 1.1E-36 T 11-10-2018 ABE28_017345 11e02ecac1c45707916678f07d65c471 108 Pfam PF11009 Protein of unknown function (DUF2847) 5 102 5.9E-35 T 11-10-2018 IPR022551 Protein of unknown function DUF2847 ABE28_017345 11e02ecac1c45707916678f07d65c471 108 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 5 103 2.4E-36 T 11-10-2018 IPR022551 Protein of unknown function DUF2847 ABE28_001370 5d97204c638d3805cd6e425f47b9ffa3 196 Pfam PF01694 Rhomboid family 54 194 3.1E-34 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 ABE28_001370 5d97204c638d3805cd6e425f47b9ffa3 196 Gene3D G3DSA:1.20.1540.10 9 195 8.1E-40 T 11-10-2018 IPR035952 Rhomboid-like superfamily ABE28_001370 5d97204c638d3805cd6e425f47b9ffa3 196 SUPERFAMILY SSF144091 15 196 1.83E-40 T 11-10-2018 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 4.5E-31 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Gene3D G3DSA:3.40.980.10 184 337 7.1E-115 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 SUPERFAMILY SSF63867 338 413 3.01E-17 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Gene3D G3DSA:2.170.190.11 50 150 7.1E-115 T 11-10-2018 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 10 176 2.6E-37 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 SUPERFAMILY SSF53218 186 327 9.95E-38 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Pfam PF03454 MoeA C-terminal region (domain IV) 341 411 1.7E-18 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 SMART SM00852 189 327 6.1E-36 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 SUPERFAMILY SSF63882 8 185 1.96E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Gene3D G3DSA:3.90.105.10 26 183 7.1E-115 T 11-10-2018 ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Pfam PF00994 Probable molybdopterin binding domain 189 326 1.5E-23 T 11-10-2018 IPR001453 MoaB/Mog domain ABE28_002915 8f71d87fd238706828f04abef5d6aff9 430 Gene3D G3DSA:2.40.340.10 338 406 7.1E-115 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 ABE28_009490 e6003a5cdfb024dffcf9b21c9d6cefa7 211 Gene3D G3DSA:3.40.630.30 1 209 3.1E-41 T 11-10-2018 ABE28_009490 e6003a5cdfb024dffcf9b21c9d6cefa7 211 Pfam PF13302 Acetyltransferase (GNAT) domain 13 167 1.5E-13 T 11-10-2018 IPR000182 GNAT domain ABE28_009490 e6003a5cdfb024dffcf9b21c9d6cefa7 211 SUPERFAMILY SSF55729 2 193 5.31E-32 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_014195 dfc51bfbc87c850945c79fad939a087a 198 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 6.9E-58 T 11-10-2018 IPR009845 Protein of unknown function DUF1405 ABE28_022370 a4c9ac240e3652724928c3d03d835e99 113 SUPERFAMILY SSF46626 6 111 5.16E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_022370 a4c9ac240e3652724928c3d03d835e99 113 PIRSF PIRSF000025 1 113 5.0E-32 T 11-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 ABE28_022370 a4c9ac240e3652724928c3d03d835e99 113 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 44 108 3.2E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_022370 a4c9ac240e3652724928c3d03d835e99 113 Gene3D G3DSA:1.10.760.10 44 113 1.8E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_013025 6e9ad829bca943fd2c18d474f3076bb4 191 SMART SM00947 26 182 2.4E-34 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABE28_013025 6e9ad829bca943fd2c18d474f3076bb4 191 Gene3D G3DSA:3.40.1050.10 2 183 1.5E-43 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABE28_013025 6e9ad829bca943fd2c18d474f3076bb4 191 SUPERFAMILY SSF53056 4 181 8.76E-38 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 ABE28_013025 6e9ad829bca943fd2c18d474f3076bb4 191 Pfam PF00484 Carbonic anhydrase 33 117 7.1E-14 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 ABE28_010795 5e7ff8fedcf7e736d4ed89625a84d7f6 150 PIRSF PIRSF018072 1 145 4.9E-34 T 11-10-2018 IPR016709 Uncharacterised protein family UPF0336 ABE28_010795 5e7ff8fedcf7e736d4ed89625a84d7f6 150 Pfam PF13452 N-terminal half of MaoC dehydratase 6 131 7.0E-36 T 11-10-2018 IPR039569 N-terminal of MaoC-like dehydratase Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241|Reactome: R-HSA-9033500 ABE28_010795 5e7ff8fedcf7e736d4ed89625a84d7f6 150 SUPERFAMILY SSF54637 6 139 1.08E-24 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_010795 5e7ff8fedcf7e736d4ed89625a84d7f6 150 Gene3D G3DSA:3.10.129.10 3 146 3.5E-31 T 11-10-2018 ABE28_015635 5fd41cabd996f54bef2991f7da9f96fa 179 Gene3D G3DSA:1.20.120.1760 4 177 1.6E-11 T 11-10-2018 ABE28_015635 5fd41cabd996f54bef2991f7da9f96fa 179 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 23 173 3.1E-37 T 11-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 ABE28_015635 5fd41cabd996f54bef2991f7da9f96fa 179 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 59 81 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABE28_015635 5fd41cabd996f54bef2991f7da9f96fa 179 Pfam PF01066 CDP-alcohol phosphatidyltransferase 18 81 2.8E-15 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 103 282 1.9E-40 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 41 314 2.9E-19 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 SUPERFAMILY SSF51735 94 283 1.32E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 Gene3D G3DSA:3.40.50.720 92 286 4.7E-73 T 11-10-2018 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 Gene3D G3DSA:3.30.70.260 316 399 6.9E-14 T 11-10-2018 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 SUPERFAMILY SSF52283 35 112 7.56E-20 T 11-10-2018 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 Gene3D G3DSA:3.40.50.720 39 311 4.7E-73 T 11-10-2018 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 ABE28_018905 ad603e91dd6f66f5ba4d8e6f42f0388a 399 SUPERFAMILY SSF55021 316 399 4.04E-10 T 11-10-2018 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 1.3E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 1.3E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 1.3E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 SMART SM00347 29 129 7.2E-26 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 Pfam PF01047 MarR family 36 93 7.6E-16 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 Gene3D G3DSA:1.10.10.10 1 141 2.5E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_006925 eb1d89c2f00381d071f879ae77b7512b 145 SUPERFAMILY SSF46785 7 140 5.0E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010105 5ec8f42ec51f0e737aef32c0af621391 134 Gene3D G3DSA:3.10.129.10 6 134 2.2E-37 T 11-10-2018 ABE28_010105 5ec8f42ec51f0e737aef32c0af621391 134 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 17 126 9.0E-21 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABE28_010105 5ec8f42ec51f0e737aef32c0af621391 134 SUPERFAMILY SSF54637 12 133 2.03E-30 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_010105 5ec8f42ec51f0e737aef32c0af621391 134 Pfam PF03061 Thioesterase superfamily 47 120 1.8E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 SUPERFAMILY SSF51735 276 540 2.22E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 SUPERFAMILY SSF53335 103 307 6.98E-15 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 Gene3D G3DSA:3.40.50.720 274 603 2.9E-119 T 11-10-2018 ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 Pfam PF02719 Polysaccharide biosynthesis protein 279 560 1.1E-125 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 Pfam PF13727 CoA-binding domain 70 234 2.1E-18 T 11-10-2018 ABE28_016040 bb69a600a4c783c03e324680c98220ea 606 Gene3D G3DSA:3.40.50.720 134 260 4.1E-36 T 11-10-2018 ABE28_007840 ade0e24eadc2465e3272097011eab0e5 128 Pfam PF11068 YlqD protein 1 128 3.0E-33 T 11-10-2018 IPR021297 YlqD protein ABE28_004280 9764a129a72283a0f167dfe4210cc16f 309 SUPERFAMILY SSF53590 4 308 4.45E-100 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_004280 9764a129a72283a0f167dfe4210cc16f 309 Gene3D G3DSA:3.90.245.10 1 309 2.2E-115 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_004280 9764a129a72283a0f167dfe4210cc16f 309 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 300 3.8E-90 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_006550 aa8728ce031e4349c5b73a5af4c10d0d 462 Gene3D G3DSA:1.20.1740.10 1 462 4.4E-58 T 11-10-2018 ABE28_006550 aa8728ce031e4349c5b73a5af4c10d0d 462 Pfam PF13520 Amino acid permease 9 429 3.4E-47 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_006550 aa8728ce031e4349c5b73a5af4c10d0d 462 PIRSF PIRSF006060 2 462 3.9E-50 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_000650 13f92debd7fd73ab7cd5871f833292f6 61 Gene3D G3DSA:4.10.830.10 1 61 7.9E-30 T 11-10-2018 ABE28_000650 13f92debd7fd73ab7cd5871f833292f6 61 SUPERFAMILY SSF57716 3 61 8.55E-22 T 11-10-2018 ABE28_000650 13f92debd7fd73ab7cd5871f833292f6 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 7.1E-24 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000650 13f92debd7fd73ab7cd5871f833292f6 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.822 T 11-10-2018 IPR023053 Ribosomal protein S14, type Z ABE28_000650 13f92debd7fd73ab7cd5871f833292f6 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_011155 cfb210786c49d0e9ef368f7d3457bae7 379 Gene3D G3DSA:2.60.40.10 215 290 1.3E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_011155 cfb210786c49d0e9ef368f7d3457bae7 379 Gene3D G3DSA:2.60.40.10 297 373 3.7E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_011155 cfb210786c49d0e9ef368f7d3457bae7 379 Gene3D G3DSA:2.60.120.380 80 208 6.4E-7 T 11-10-2018 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 Pfam PF07690 Major Facilitator Superfamily 23 366 1.8E-50 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 SUPERFAMILY SSF103473 11 397 6.67E-59 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 PRINTS PR01035 Tetracycline resistance protein signature 173 193 1.3E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 PRINTS PR01035 Tetracycline resistance protein signature 288 309 1.3E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 PRINTS PR01035 Tetracycline resistance protein signature 23 39 1.3E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 PRINTS PR01035 Tetracycline resistance protein signature 145 167 1.3E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 Gene3D G3DSA:1.20.1250.20 4 401 6.3E-63 T 11-10-2018 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 ProSitePatterns PS00217 Sugar transport proteins signature 2. 322 347 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_018410 a97c8790ad01f9e391f4dcebe2f69199 408 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 121 135 1.7E-7 T 11-10-2018 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 217 241 1.7E-7 T 11-10-2018 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 Gene3D G3DSA:3.40.50.150 87 328 7.7E-56 T 11-10-2018 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 Pfam PF02384 N-6 DNA Methylase 97 310 3.7E-16 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 Gene3D G3DSA:1.10.150.470 1 85 2.5E-25 T 11-10-2018 ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 PIRSF PIRSF026567 1 328 1.8E-137 T 11-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted ABE28_017115 a51e4bcbea436dc9247540df17676b6a 328 SUPERFAMILY SSF53335 23 309 1.63E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.322 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 Gene3D G3DSA:3.100.10.10 66 146 3.8E-26 T 11-10-2018 ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.2E-53 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 SUPERFAMILY SSF52080 4 143 5.89E-49 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily ABE28_000680 0cf030ef34df303ccc99015745ed721e 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 9.3E-38 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 Pfam PF02599 Global regulator protein family 1 53 1.3E-27 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 4.0E-16 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 Gene3D G3DSA:3.30.70.1680 1 63 6.9E-30 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 69 1.4E-31 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 SUPERFAMILY SSF117130 1 55 4.05E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 ABE28_022435 f79f0626e5e68541f8b7075b0daaf35a 77 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 65 18.092 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 ABE28_024275 5366eb5b03887e61865dbd61a1b31e43 94 SUPERFAMILY SSF46689 6 91 4.54E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_024275 5366eb5b03887e61865dbd61a1b31e43 94 Gene3D G3DSA:1.10.10.60 10 89 2.1E-8 T 11-10-2018 ABE28_024275 5366eb5b03887e61865dbd61a1b31e43 94 Pfam PF01527 Transposase 4 74 5.6E-17 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ABE28_012205 5ef1ed45bfac0fdcc5d1432ad0554d78 141 SUPERFAMILY SSF52309 4 96 5.49E-7 T 11-10-2018 ABE28_012205 5ef1ed45bfac0fdcc5d1432ad0554d78 141 Gene3D G3DSA:3.40.50.450 2 127 1.3E-8 T 11-10-2018 ABE28_012205 5ef1ed45bfac0fdcc5d1432ad0554d78 141 Pfam PF05014 Nucleoside 2-deoxyribosyltransferase 7 97 6.0E-9 T 11-10-2018 IPR007710 Nucleoside 2-deoxyribosyltransferase Reactome: R-HSA-74259 ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 32.134 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 Pfam PF02545 Maf-like protein 4 183 5.8E-58 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 SUPERFAMILY SSF52972 2 182 1.77E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 Gene3D G3DSA:3.90.950.10 1 187 2.3E-72 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.1E-57 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ABE28_016395 e5a6fa2fd0aa07deebdddb329995c588 189 PIRSF PIRSF006305 1 188 1.7E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 ABE28_006420 d8528c3ee555666c4000ce5d021480e7 103 SUPERFAMILY SSF89360 4 93 5.3E-9 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_006420 d8528c3ee555666c4000ce5d021480e7 103 Gene3D G3DSA:2.60.300.12 1 98 2.5E-8 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 9.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 9.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 9.9E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 SUPERFAMILY SSF46785 8 114 1.39E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 SMART SM00347 30 125 7.2E-21 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 Pfam PF01047 MarR family 38 95 2.5E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_014680 a513ec0321c43d2ab0f7e0e9188c20da 145 Gene3D G3DSA:1.10.10.10 2 144 5.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019380 2922d17c07006839e8e5881789831742 280 Gene3D G3DSA:3.40.50.10490 95 276 2.7E-43 T 11-10-2018 ABE28_019380 2922d17c07006839e8e5881789831742 280 Pfam PF01418 Helix-turn-helix domain, rpiR family 10 76 8.5E-21 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 ABE28_019380 2922d17c07006839e8e5881789831742 280 SUPERFAMILY SSF53697 96 271 3.67E-37 T 11-10-2018 ABE28_019380 2922d17c07006839e8e5881789831742 280 Pfam PF01380 SIS domain 127 232 2.7E-21 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 ABE28_019380 2922d17c07006839e8e5881789831742 280 SUPERFAMILY SSF46689 7 77 1.2E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_019380 2922d17c07006839e8e5881789831742 280 Gene3D G3DSA:1.10.10.10 4 80 2.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 Gene3D G3DSA:3.40.1410.10 76 230 9.7E-32 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 2.5E-90 T 11-10-2018 IPR012770 Trehalose operon transcriptional repressor ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 SMART SM00866 89 228 2.4E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 67 2.9E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 1.2E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 1.2E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 SMART SM00345 8 67 1.6E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 SUPERFAMILY SSF46785 3 71 1.93E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 Pfam PF07702 UTRA domain 91 228 1.7E-30 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 SUPERFAMILY SSF64288 73 233 8.32E-42 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_009870 fadb350fdcdaf21109aa09e254d69bcb 237 Gene3D G3DSA:1.10.10.10 2 67 2.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 Gene3D G3DSA:1.10.150.240 15 83 5.9E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 Gene3D G3DSA:3.40.50.1000 3 198 5.9E-52 T 11-10-2018 IPR023214 HAD superfamily ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 72 183 3.1E-15 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 SUPERFAMILY SSF56784 1 214 9.61E-49 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 127 143 6.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 145 165 6.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.6E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_019985 0b2e533a74f9977fee1deea1a7b2a2c8 217 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 7.6E-40 T 11-10-2018 ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 Pfam PF01327 Polypeptide deformylase 4 148 2.1E-47 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 6 156 6.9E-50 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 PIRSF PIRSF004749 1 160 2.0E-48 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 PRINTS PR01576 Peptide deformylase signature 33 62 5.0E-33 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 PRINTS PR01576 Peptide deformylase signature 88 99 5.0E-33 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 PRINTS PR01576 Peptide deformylase signature 119 148 5.0E-33 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 PRINTS PR01576 Peptide deformylase signature 100 118 5.0E-33 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 Gene3D G3DSA:3.90.45.10 1 156 2.4E-57 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 Hamap MF_00163 Peptide deformylase [def]. 2 161 27.394 T 11-10-2018 IPR023635 Peptide deformylase ABE28_007695 9e2c310b431fc0b64af7fbb034f3ff64 161 SUPERFAMILY SSF56420 2 152 6.28E-52 T 11-10-2018 IPR036821 Peptide deformylase superfamily ABE28_010535 1353a020ad32195bf14062535b01e774 443 Gene3D G3DSA:1.20.1250.20 228 429 3.7E-32 T 11-10-2018 ABE28_010535 1353a020ad32195bf14062535b01e774 443 SUPERFAMILY SSF103473 4 430 4.45E-72 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010535 1353a020ad32195bf14062535b01e774 443 Gene3D G3DSA:1.20.1250.20 3 205 6.1E-34 T 11-10-2018 ABE28_010535 1353a020ad32195bf14062535b01e774 443 Pfam PF07690 Major Facilitator Superfamily 15 390 7.1E-46 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_003460 55ce4e4d7d39f21833f3640383c77c8d 159 Gene3D G3DSA:3.90.1720.10 30 159 3.8E-39 T 11-10-2018 ABE28_003460 55ce4e4d7d39f21833f3640383c77c8d 159 SUPERFAMILY SSF54001 37 158 6.87E-37 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_003460 55ce4e4d7d39f21833f3640383c77c8d 159 Pfam PF00877 NlpC/P60 family 50 155 1.0E-26 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_009020 48b257fab559c2fb0f72876ebb4c6958 116 Gene3D G3DSA:2.40.50.230 20 112 6.7E-7 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily ABE28_000250 d8133ff743ef41bb1f64d17a339ae302 261 SUPERFAMILY SSF161098 61 241 1.57E-35 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_000250 d8133ff743ef41bb1f64d17a339ae302 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 252 7.5E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_000250 d8133ff743ef41bb1f64d17a339ae302 261 Gene3D G3DSA:1.10.3720.10 61 252 2.0E-27 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_021305 2a34e41ec1b4964c7d9e6c42a6ac603e 134 Gene3D G3DSA:3.30.310.100 4 106 5.5E-30 T 11-10-2018 IPR036491 YugN-like superfamily ABE28_021305 2a34e41ec1b4964c7d9e6c42a6ac603e 134 Pfam PF08868 YugN-like family 4 131 5.9E-53 T 11-10-2018 IPR014967 Uncharacterised protein family, YugN-like ABE28_021305 2a34e41ec1b4964c7d9e6c42a6ac603e 134 SUPERFAMILY SSF160755 1 132 3.53E-37 T 11-10-2018 IPR036491 YugN-like superfamily ABE28_010155 cefeaf2174dd47cb4e30e44649bcd5d3 98 Gene3D G3DSA:3.40.250.10 1 98 1.2E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_010155 cefeaf2174dd47cb4e30e44649bcd5d3 98 SUPERFAMILY SSF52821 3 96 1.7E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_010155 cefeaf2174dd47cb4e30e44649bcd5d3 98 SMART SM00450 4 98 3.3E-17 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_010155 cefeaf2174dd47cb4e30e44649bcd5d3 98 Pfam PF00581 Rhodanese-like domain 7 95 1.7E-15 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_003060 23eed72de5151ea71aa25767811227fd 319 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 240 1.3E-26 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_003060 23eed72de5151ea71aa25767811227fd 319 SUPERFAMILY SSF51735 1 307 3.28E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003060 23eed72de5151ea71aa25767811227fd 319 Gene3D G3DSA:3.40.50.720 1 311 4.1E-106 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Gene3D G3DSA:2.20.25.90 4 69 1.3E-16 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Gene3D G3DSA:3.30.2070.10 433 521 5.8E-150 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 3.2E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 SUPERFAMILY SSF53706 12 557 8.64E-165 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 SMART SM00926 9 64 1.9E-18 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 SUPERFAMILY SSF50692 527 679 3.84E-29 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Gene3D G3DSA:3.40.50.740 78 478 5.8E-150 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Pfam PF01568 Molydopterin dinucleotide binding domain 565 665 1.8E-17 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Gene3D G3DSA:2.40.40.20 546 681 9.2E-26 T 11-10-2018 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Pfam PF00384 Molybdopterin oxidoreductase 67 472 1.4E-62 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_002530 4d0cee4ce95706723148bbc089c9c44d 681 Gene3D G3DSA:3.40.228.10 145 543 5.8E-150 T 11-10-2018 ABE28_011180 5599c04c239b50f2b28e622f1e96be80 250 Pfam PF00005 ABC transporter 20 164 5.9E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_011180 5599c04c239b50f2b28e622f1e96be80 250 SMART SM00382 26 213 1.4E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_011180 5599c04c239b50f2b28e622f1e96be80 250 SUPERFAMILY SSF52540 2 226 4.22E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_011180 5599c04c239b50f2b28e622f1e96be80 250 Gene3D G3DSA:3.40.50.300 1 243 1.9E-58 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00646 477 585 4.9E-22 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SUPERFAMILY SSF53187 416 588 1.44E-46 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00287 30 92 5.0E-13 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00287 260 322 3.2E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00287 104 166 2.2E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00287 334 398 9.8E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 SMART SM00287 186 248 1.1E-5 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:3.40.630.40 413 589 3.2E-51 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:2.30.30.40 187 253 5.4E-16 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 PIRSF PIRSF037846 1 262 1.9E-55 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 PIRSF PIRSF037846 325 589 1.2E-91 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 PIRSF PIRSF037846 252 332 7.7E-12 T 11-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Pfam PF08239 Bacterial SH3 domain 345 392 1.6E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Pfam PF08239 Bacterial SH3 domain 39 89 3.2E-9 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Pfam PF08239 Bacterial SH3 domain 112 163 1.6E-12 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Pfam PF08239 Bacterial SH3 domain 196 245 2.6E-11 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 418 585 6.1E-42 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:2.30.30.40 26 94 2.1E-15 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:2.30.30.40 254 323 1.1E-13 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:2.30.30.40 95 166 5.3E-17 T 11-10-2018 ABE28_016150 c73b8ccebedf95ff589a7ada45caf4fa 589 Gene3D G3DSA:2.30.30.40 330 398 3.5E-10 T 11-10-2018 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 SUPERFAMILY SSF53067 124 253 9.07E-41 T 11-10-2018 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 Gene3D G3DSA:3.30.420.40 1 88 1.2E-34 T 11-10-2018 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 SUPERFAMILY SSF53067 1 122 1.5E-38 T 11-10-2018 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 Pfam PF03309 Type III pantothenate kinase 3 206 1.2E-74 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 4 249 1.4E-83 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 Gene3D G3DSA:3.30.420.40 89 259 6.9E-63 T 11-10-2018 ABE28_000360 dcba663097bfaadfa67aa1fe4d4d9744 259 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 254 37.654 T 11-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 Gene3D G3DSA:3.40.1410.10 88 248 3.9E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 77 1.2E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 Pfam PF07702 UTRA domain 100 241 6.2E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 SMART SM00345 19 78 3.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 7.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 7.5E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 SUPERFAMILY SSF64288 66 247 9.42E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 SUPERFAMILY SSF46785 7 77 1.47E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 SMART SM00866 100 241 2.6E-21 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_008530 ca7d3a42a199c4f08ff5a7867edc30ac 248 Gene3D G3DSA:1.10.10.10 3 77 2.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_017905 7d15e0b208786f426dcb6f178bfe7ea4 94 SUPERFAMILY SSF89447 1 52 7.46E-17 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily ABE28_017905 7d15e0b208786f426dcb6f178bfe7ea4 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 2.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_017905 7d15e0b208786f426dcb6f178bfe7ea4 94 SMART SM00966 8 51 7.5E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_017905 7d15e0b208786f426dcb6f178bfe7ea4 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 3.3E-11 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_017905 7d15e0b208786f426dcb6f178bfe7ea4 94 Gene3D G3DSA:2.10.260.10 1 53 1.1E-25 T 11-10-2018 ABE28_004370 a9a92ad5b554bdeb2043d84c7477b0e5 491 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 18 466 1.5E-149 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_004370 a9a92ad5b554bdeb2043d84c7477b0e5 491 PIRSF PIRSF005690 1 482 2.6E-140 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_015060 4c7ce132b3f619c64c17e06f779c9305 278 SUPERFAMILY SSF55681 5 276 5.47E-67 T 11-10-2018 ABE28_015060 4c7ce132b3f619c64c17e06f779c9305 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 9.3E-26 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABE28_015060 4c7ce132b3f619c64c17e06f779c9305 278 Gene3D G3DSA:3.30.930.10 5 278 1.2E-66 T 11-10-2018 ABE28_015060 4c7ce132b3f619c64c17e06f779c9305 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 65.288 T 11-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 SUPERFAMILY SSF110710 12 188 1.36E-75 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 17 187 1.6E-78 T 11-10-2018 IPR006340 Protein of unknown function DUF436 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 Pfam PF04260 Protein of unknown function (DUF436) 18 187 8.3E-77 T 11-10-2018 IPR006340 Protein of unknown function DUF436 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 Hamap MF_00800 UPF0340 protein . 1 197 89.511 T 11-10-2018 IPR006340 Protein of unknown function DUF436 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 22 187 5.0E-63 T 11-10-2018 IPR006340 Protein of unknown function DUF436 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 PIRSF PIRSF007510 10 190 4.1E-79 T 11-10-2018 IPR006340 Protein of unknown function DUF436 ABE28_022890 380c7e5809f8ab4bf4ff01325a66c9d1 197 Gene3D G3DSA:3.40.50.10360 11 196 4.7E-79 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like ABE28_011590 fdd3570a1b6e0328854b0ddfa2c5446b 448 Pfam PF02378 Phosphotransferase system, EIIC 32 364 4.5E-45 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_011590 fdd3570a1b6e0328854b0ddfa2c5446b 448 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 436 3.7E-106 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 ABE28_011590 fdd3570a1b6e0328854b0ddfa2c5446b 448 PIRSF PIRSF006351 4 445 2.6E-131 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 37.309 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 SUPERFAMILY SSF53178 1 185 1.7E-69 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 3.7E-71 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 Gene3D G3DSA:3.40.50.1470 1 186 5.6E-72 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 ABE28_000265 1d36b27e55a99aaa12d4866f086f6bfe 186 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 2.0E-60 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 Gene3D G3DSA:3.40.50.720 138 263 7.0E-99 T 11-10-2018 ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 Pfam PF00107 Zinc-binding dehydrogenase 155 273 5.0E-15 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 Gene3D G3DSA:3.90.180.10 11 314 7.0E-99 T 11-10-2018 ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 SUPERFAMILY SSF50129 6 147 1.83E-32 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 89 2.7E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 SUPERFAMILY SSF51735 117 291 3.74E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019185 42d25dedf2ef84c722372e5c2b623196 329 SMART SM00829 12 327 6.1E-8 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_011105 23278d4bc9cb8daf0037ba9573e6b573 469 SUPERFAMILY SSF52794 369 456 1.2E-15 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_011105 23278d4bc9cb8daf0037ba9573e6b573 469 Gene3D G3DSA:3.40.50.2300 357 460 1.6E-24 T 11-10-2018 ABE28_011105 23278d4bc9cb8daf0037ba9573e6b573 469 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 370 448 1.5E-6 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 Gene3D G3DSA:3.40.1550.10 46 232 9.3E-62 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 Gene3D G3DSA:2.30.330.10 240 329 6.6E-10 T 11-10-2018 IPR036429 SpoA-like superfamily ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 1.0E-114 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 2.0E-76 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 PIRSF PIRSF002888 2 332 2.4E-116 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 SUPERFAMILY SSF103039 47 231 5.49E-32 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 1.9E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 1.9E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 1.9E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 1.9E-29 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 324 4.1E-21 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) ABE28_008005 e5362cb23348df44c65c0dba303a9ca3 332 SUPERFAMILY SSF101801 253 328 4.32E-17 T 11-10-2018 IPR036429 SpoA-like superfamily ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 Gene3D G3DSA:3.40.50.720 1 260 1.1E-69 T 11-10-2018 ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 257 2.5E-52 T 11-10-2018 ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 6.3E-32 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 SUPERFAMILY SSF51735 7 257 4.31E-72 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006990 a9d63d790c7390277d2852d9ff14a93d 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.8E-7 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_000510 3007cb483faffca4e6c5c56d27dd42eb 60 Hamap MF_00422 Protein translocase subunit SecE [secE]. 2 57 12.982 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000510 3007cb483faffca4e6c5c56d27dd42eb 60 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 6 57 1.2E-21 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000510 3007cb483faffca4e6c5c56d27dd42eb 60 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 4 59 5.6E-22 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 ABE28_000510 3007cb483faffca4e6c5c56d27dd42eb 60 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 7 35 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 ABE28_000510 3007cb483faffca4e6c5c56d27dd42eb 60 Gene3D G3DSA:1.20.5.1030 1 58 1.4E-18 T 11-10-2018 IPR038379 SecE superfamily ABE28_015155 83b4449e05e737d4b3e8c00a31cbe359 208 Gene3D G3DSA:3.60.15.10 1 208 1.0E-66 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015155 83b4449e05e737d4b3e8c00a31cbe359 208 SMART SM00849 12 191 1.6E-46 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_015155 83b4449e05e737d4b3e8c00a31cbe359 208 SUPERFAMILY SSF56281 1 208 2.03E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_015155 83b4449e05e737d4b3e8c00a31cbe359 208 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 1.6E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_000080 f5d5e6e66f5c53f0e1e31a08acf4e6b3 72 Pfam PF10704 Protein of unknown function (DUF2508) 2 69 1.8E-24 T 11-10-2018 IPR019644 Protein of unknown function DUF2508 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SMART SM00028 237 270 8.5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SMART SM00028 271 304 64.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SMART SM00028 170 205 13.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SMART SM00028 32 65 240.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SMART SM00028 134 167 21.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SUPERFAMILY SSF48452 204 408 1.2E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 Gene3D G3DSA:1.25.40.10 201 418 2.5E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 Gene3D G3DSA:1.25.40.10 5 200 2.6E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 SUPERFAMILY SSF48452 31 198 1.71E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 Pfam PF13424 Tetratricopeptide repeat 139 198 7.9E-9 T 11-10-2018 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 Pfam PF14559 Tetratricopeptide repeat 48 101 3.6E-6 T 11-10-2018 ABE28_014225 edaa8964bb17ff1232f25302e5645afe 423 Pfam PF14559 Tetratricopeptide repeat 282 340 1.6E-5 T 11-10-2018 ABE28_008535 cd3f89aec3fdead9fc8e547bfc21fedf 448 Pfam PF07690 Major Facilitator Superfamily 27 304 6.8E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_008535 cd3f89aec3fdead9fc8e547bfc21fedf 448 SUPERFAMILY SSF103473 14 431 2.75E-82 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_008535 cd3f89aec3fdead9fc8e547bfc21fedf 448 Gene3D G3DSA:1.20.1250.20 19 437 5.0E-76 T 11-10-2018 ABE28_019080 ac52e6ba9e545e2420f10740e45cc40a 139 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABE28_019080 ac52e6ba9e545e2420f10740e45cc40a 139 SUPERFAMILY SSF55811 6 121 1.12E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_019080 ac52e6ba9e545e2420f10740e45cc40a 139 Pfam PF00293 NUDIX domain 11 120 1.1E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_019080 ac52e6ba9e545e2420f10740e45cc40a 139 Gene3D G3DSA:3.90.79.10 4 134 9.4E-16 T 11-10-2018 ABE28_011235 9c0d6b6a89f49eb4ac585beac90935c5 451 SUPERFAMILY SSF103473 13 429 3.79E-82 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011235 9c0d6b6a89f49eb4ac585beac90935c5 451 Gene3D G3DSA:1.20.1250.20 19 435 7.9E-72 T 11-10-2018 ABE28_011235 9c0d6b6a89f49eb4ac585beac90935c5 451 Pfam PF07690 Major Facilitator Superfamily 27 315 2.4E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 1.0E-7 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 1.0E-7 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 SUPERFAMILY SSF52788 1 142 2.62E-34 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 Gene3D G3DSA:3.40.50.2300 1 147 3.0E-49 T 11-10-2018 ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 SMART SM00226 2 144 7.9E-26 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABE28_022905 7ca01c6869c6da4aefd71b71ddddd8e1 147 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 140 1.1E-26 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 Gene3D G3DSA:3.40.250.10 1 149 8.7E-41 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 SMART SM00450 154 272 3.1E-16 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 SMART SM00450 5 131 2.2E-19 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 Gene3D G3DSA:3.40.250.10 162 275 5.9E-33 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 SUPERFAMILY SSF52821 165 275 1.44E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 SUPERFAMILY SSF52821 3 149 7.6E-37 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 ProSitePatterns PS00380 Rhodanese signature 1. 38 49 - T 11-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 Pfam PF00581 Rhodanese-like domain 14 128 1.1E-16 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_013910 8b8d6f53f5de98bc0103d9ec62fb9a41 275 Pfam PF00581 Rhodanese-like domain 165 267 9.5E-14 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 Gene3D G3DSA:3.40.190.10 199 501 3.4E-152 T 11-10-2018 ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 Gene3D G3DSA:3.90.76.10 50 198 3.4E-152 T 11-10-2018 ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 Gene3D G3DSA:3.10.105.10 273 492 3.4E-152 T 11-10-2018 ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 PIRSF PIRSF002741 4 516 1.2E-134 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 84 435 1.3E-103 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 90 111 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site ABE28_019440 3339aff95a787a2d360cbcf8c19053a9 518 SUPERFAMILY SSF53850 36 517 7.0E-152 T 11-10-2018 ABE28_012260 5363e5b252429764bde15360f3973214 350 SUPERFAMILY SSF51004 14 349 3.27E-46 T 11-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily ABE28_012260 5363e5b252429764bde15360f3973214 350 Pfam PF10282 Lactonase, 7-bladed beta-propeller 10 349 1.4E-125 T 11-10-2018 IPR019405 Lactonase, 7-bladed beta propeller ABE28_012260 5363e5b252429764bde15360f3973214 350 Gene3D G3DSA:2.130.10.10 7 350 7.5E-121 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 ABE28_013830 8a792c06086687bad363e57f787a0b32 158 Gene3D G3DSA:1.10.8.1150 93 158 9.7E-11 T 11-10-2018 ABE28_013830 8a792c06086687bad363e57f787a0b32 158 Pfam PF02618 YceG-like family 97 156 2.1E-7 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ABE28_016070 639c3acdc2643beda411862e7eda5eea 63 Gene3D G3DSA:2.10.230.20 17 59 3.8E-5 T 11-10-2018 ABE28_016070 639c3acdc2643beda411862e7eda5eea 63 SUPERFAMILY SSF57938 21 50 8.76E-5 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 Gene3D G3DSA:1.10.1660.10 3 77 3.6E-22 T 11-10-2018 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 Pfam PF13411 MerR HTH family regulatory protein 11 74 2.2E-17 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 Gene3D G3DSA:3.40.50.280 180 297 2.0E-11 T 11-10-2018 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 Pfam PF02607 B12 binding domain 125 167 2.2E-5 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 SUPERFAMILY SSF52242 184 276 1.07E-5 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 Gene3D G3DSA:1.10.1240.10 103 174 5.2E-8 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 SMART SM00422 9 78 2.1E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_013825 601fbb8dd737d79d02d9e8f941a77e6f 302 SUPERFAMILY SSF46955 9 76 2.06E-17 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_002670 902186f4c4fc60fb2dc58b10416299fc 365 PIRSF PIRSF038991 2 361 4.3E-88 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABE28_002670 902186f4c4fc60fb2dc58b10416299fc 365 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 198 352 3.3E-31 T 11-10-2018 IPR017516 AbrB duplication ABE28_002670 902186f4c4fc60fb2dc58b10416299fc 365 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 15 168 1.0E-38 T 11-10-2018 IPR017516 AbrB duplication ABE28_002670 902186f4c4fc60fb2dc58b10416299fc 365 Pfam PF05145 Transition state regulatory protein AbrB 36 352 4.7E-80 T 11-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 SUPERFAMILY SSF51569 31 354 2.75E-102 T 11-10-2018 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 Pfam PF01817 Chorismate mutase type II 10 87 1.2E-17 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 Pfam PF00793 DAHP synthetase I family 111 353 3.5E-82 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 Gene3D G3DSA:1.20.59.10 8 92 2.0E-25 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 SMART SM00830 10 89 2.6E-20 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 102 1.8E-38 T 11-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 Gene3D G3DSA:3.20.20.70 93 357 4.5E-102 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_017330 0e3007b325a863e8e00db2068dd07f96 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 8.0E-120 T 11-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 ABE28_020350 dee94d74e498ae058dea9ecad3d27b74 228 Pfam PF00005 ABC transporter 17 151 2.8E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_020350 dee94d74e498ae058dea9ecad3d27b74 228 SMART SM00382 26 200 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_020350 dee94d74e498ae058dea9ecad3d27b74 228 Gene3D G3DSA:3.40.50.300 1 227 3.1E-49 T 11-10-2018 ABE28_020350 dee94d74e498ae058dea9ecad3d27b74 228 SUPERFAMILY SSF52540 1 213 6.8E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004705 945ac2d57f386e8a8d5204fb0eee92a4 608 Pfam PF13520 Amino acid permease 29 445 7.6E-30 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_004705 945ac2d57f386e8a8d5204fb0eee92a4 608 Gene3D G3DSA:1.20.1740.10 48 463 3.8E-21 T 11-10-2018 ABE28_009465 a35c33eb1c73616aa2dd476a5aa7312b 509 Pfam PF03806 AbgT putative transporter family 15 506 2.1E-185 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 ABE28_015315 fe3b9be8ac217b08d867d1d0a4ee2e3a 86 Pfam PF11116 Protein of unknown function (DUF2624) 2 82 1.4E-22 T 11-10-2018 IPR020277 Protein of unknown function DUF2624 ABE28_015315 fe3b9be8ac217b08d867d1d0a4ee2e3a 86 ProDom PD060869 YQFT IG BH1387 1 68 7.0E-9 T 11-10-2018 IPR020277 Protein of unknown function DUF2624 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 1.7E-5 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.7E-5 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 1.7E-5 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 1.0E-11 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.0E-11 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 1.0E-11 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 1.0E-11 T 11-10-2018 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 318 9.2E-40 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 SUPERFAMILY SSF51905 1 337 8.1E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009780 51b3aeda208c7048bf7b9b1bd7dea95c 392 Gene3D G3DSA:3.50.50.100 1 391 2.0E-111 T 11-10-2018 ABE28_023375 8d270fea822704b68ed2f2905fb31ff0 213 Pfam PF04402 Protein of unknown function (DUF541) 15 211 8.2E-46 T 11-10-2018 IPR007497 Protein of unknown function DUF541 ABE28_023375 8d270fea822704b68ed2f2905fb31ff0 213 Gene3D G3DSA:3.30.110.170 16 211 8.7E-58 T 11-10-2018 ABE28_023375 8d270fea822704b68ed2f2905fb31ff0 213 Gene3D G3DSA:3.30.70.2970 26 132 8.7E-58 T 11-10-2018 ABE28_019640 c6bc05e428840695860f9bccb1e9b6cc 301 Pfam PF00892 EamA-like transporter family 6 139 6.5E-22 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019640 c6bc05e428840695860f9bccb1e9b6cc 301 Pfam PF00892 EamA-like transporter family 150 287 1.8E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019640 c6bc05e428840695860f9bccb1e9b6cc 301 SUPERFAMILY SSF103481 41 139 4.32E-11 T 11-10-2018 ABE28_019640 c6bc05e428840695860f9bccb1e9b6cc 301 SUPERFAMILY SSF103481 186 290 1.11E-17 T 11-10-2018 ABE28_022560 2fd2c13aaecb5a840a9d8d375d521e47 132 Gene3D G3DSA:3.40.50.620 1 127 2.4E-39 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_022560 2fd2c13aaecb5a840a9d8d375d521e47 132 Pfam PF01467 Cytidylyltransferase-like 5 120 1.4E-21 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_022560 2fd2c13aaecb5a840a9d8d375d521e47 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 1.9E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_022560 2fd2c13aaecb5a840a9d8d375d521e47 132 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 2.2E-60 T 11-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 ABE28_022560 2fd2c13aaecb5a840a9d8d375d521e47 132 SUPERFAMILY SSF52374 1 124 1.71E-32 T 11-10-2018 ABE28_010405 04f9d41ece3b1a7986957ad0e27c2d87 249 SUPERFAMILY SSF102588 4 214 2.35E-52 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_010405 04f9d41ece3b1a7986957ad0e27c2d87 249 Gene3D G3DSA:3.40.50.10320 1 231 1.4E-52 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_010405 04f9d41ece3b1a7986957ad0e27c2d87 249 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 4.1E-31 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ABE28_023200 64605b8a65a0c12d33bb7f39dfae8217 372 Gene3D G3DSA:3.40.50.300 212 251 3.6E-5 T 11-10-2018 ABE28_023200 64605b8a65a0c12d33bb7f39dfae8217 372 SUPERFAMILY SSF52540 29 66 5.94E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023200 64605b8a65a0c12d33bb7f39dfae8217 372 SUPERFAMILY SSF52540 216 356 2.38E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013925 3feec119557a9001feba1c46ea47093d 176 Gene3D G3DSA:1.20.120.1630 1 170 2.3E-18 T 11-10-2018 ABE28_013925 3feec119557a9001feba1c46ea47093d 176 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 73 164 1.2E-28 T 11-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Gene3D G3DSA:1.10.10.60 630 690 7.0E-6 T 11-10-2018 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SMART SM00382 401 545 2.8E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Gene3D G3DSA:3.40.50.300 370 552 1.6E-64 T 11-10-2018 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SMART SM00091 245 313 30.0 T 11-10-2018 IPR000014 PAS domain ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SMART SM00091 127 193 0.36 T 11-10-2018 IPR000014 PAS domain ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Gene3D G3DSA:3.30.450.20 129 230 1.6E-10 T 11-10-2018 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SUPERFAMILY SSF46689 594 687 1.61E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Gene3D G3DSA:3.30.450.20 231 369 1.1E-11 T 11-10-2018 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SUPERFAMILY SSF52540 381 624 3.1E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Pfam PF13426 PAS domain 258 353 0.0038 T 11-10-2018 IPR000014 PAS domain ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Pfam PF13426 PAS domain 137 227 6.8E-5 T 11-10-2018 IPR000014 PAS domain ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 SUPERFAMILY SSF55785 123 224 3.24E-7 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Gene3D G3DSA:1.10.8.60 553 627 7.1E-25 T 11-10-2018 ABE28_014320 78bd49b69d7f1546ffb53d58402820e2 701 Pfam PF00158 Sigma-54 interaction domain 382 549 5.3E-69 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_003690 4429ece384e0e41393d8a701ed0416c3 137 Gene3D G3DSA:1.10.10.10 1 133 1.2E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003690 4429ece384e0e41393d8a701ed0416c3 137 Pfam PF01047 MarR family 23 80 9.5E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_003690 4429ece384e0e41393d8a701ed0416c3 137 SMART SM00347 16 116 2.1E-27 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_003690 4429ece384e0e41393d8a701ed0416c3 137 SUPERFAMILY SSF46785 2 131 8.32E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_002225 8a969a7c0854893054de6c90056cfdf9 430 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 142 159 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 ABE28_002225 8a969a7c0854893054de6c90056cfdf9 430 SUPERFAMILY SSF53850 22 427 6.99E-55 T 11-10-2018 ABE28_002225 8a969a7c0854893054de6c90056cfdf9 430 Gene3D G3DSA:3.40.190.10 147 419 5.6E-66 T 11-10-2018 ABE28_002225 8a969a7c0854893054de6c90056cfdf9 430 Gene3D G3DSA:3.40.190.10 53 385 5.6E-66 T 11-10-2018 ABE28_002225 8a969a7c0854893054de6c90056cfdf9 430 Pfam PF13416 Bacterial extracellular solute-binding protein 55 360 1.2E-36 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_011860 5e221f6b6930ad0344d1b36e8235c363 164 Pfam PF13798 Protein of unknown function with PCYCGC motif 10 163 8.8E-66 T 11-10-2018 IPR025673 Protein of unknown function with PCYCGC motif ABE28_007420 10745b0fadca5186e4c1ff652fd645d4 287 SUPERFAMILY SSF53098 119 281 8.35E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_007420 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF00665 Integrase core domain 125 239 6.8E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_007420 10745b0fadca5186e4c1ff652fd645d4 287 Gene3D G3DSA:3.30.420.10 121 275 1.4E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_007420 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF13276 HTH-like domain 52 102 7.6E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_021640 10745b0fadca5186e4c1ff652fd645d4 287 SUPERFAMILY SSF53098 119 281 8.35E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_021640 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF00665 Integrase core domain 125 239 6.8E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_021640 10745b0fadca5186e4c1ff652fd645d4 287 Gene3D G3DSA:3.30.420.10 121 275 1.4E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_021640 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF13276 HTH-like domain 52 102 7.6E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_002545 10745b0fadca5186e4c1ff652fd645d4 287 SUPERFAMILY SSF53098 119 281 8.35E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_002545 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF00665 Integrase core domain 125 239 6.8E-28 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_002545 10745b0fadca5186e4c1ff652fd645d4 287 Gene3D G3DSA:3.30.420.10 121 275 1.4E-18 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_002545 10745b0fadca5186e4c1ff652fd645d4 287 Pfam PF13276 HTH-like domain 52 102 7.6E-11 T 11-10-2018 IPR025948 HTH-like domain ABE28_003040 afdc683b2291e778d7070d2e2b854a85 283 SUPERFAMILY SSF103481 37 138 2.09E-9 T 11-10-2018 ABE28_003040 afdc683b2291e778d7070d2e2b854a85 283 Pfam PF06800 Sugar transport protein 5 280 2.2E-99 T 11-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 ABE28_003040 afdc683b2291e778d7070d2e2b854a85 283 SUPERFAMILY SSF103481 186 280 2.75E-7 T 11-10-2018 ABE28_006555 6b8501f679678563efccbae87ad6c069 55 Pfam PF10055 Uncharacterized small protein (DUF2292) 9 44 4.2E-16 T 11-10-2018 IPR018743 Protein of unknown function DUF2292 ABE28_015895 85b8fec632e6f0e7a9e8bc3f0286d629 247 Pfam PF02706 Chain length determinant protein 7 90 7.4E-10 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 SMART SM00421 9 66 2.6E-24 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 Gene3D G3DSA:1.10.10.10 1 74 7.2E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 SUPERFAMILY SSF46894 8 71 1.77E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 3.4E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_016650 0a0da7da3c25d8b13108f477303497a1 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 1.2E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_006365 3cf832acb3f3ff24e57cf39af1301bcf 395 SUPERFAMILY SSF89796 3 395 1.83E-143 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ABE28_006365 3cf832acb3f3ff24e57cf39af1301bcf 395 Gene3D G3DSA:3.30.1540.10 231 323 4.1E-143 T 11-10-2018 ABE28_006365 3cf832acb3f3ff24e57cf39af1301bcf 395 Pfam PF02515 CoA-transferase family III 5 372 2.5E-136 T 11-10-2018 IPR003673 CoA-transferase family III GO:0003824 ABE28_006365 3cf832acb3f3ff24e57cf39af1301bcf 395 Gene3D G3DSA:3.40.50.10540 5 388 4.1E-143 T 11-10-2018 IPR023606 CoA-transferase family III domain superfamily ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 6 315 1.7E-91 T 11-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 Pfam PF01544 CorA-like Mg2+ transporter protein 28 310 8.4E-80 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 SUPERFAMILY SSF143865 22 249 2.62E-59 T 11-10-2018 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 Gene3D G3DSA:1.20.58.340 239 315 9.0E-31 T 11-10-2018 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 SUPERFAMILY SSF144083 250 312 7.85E-21 T 11-10-2018 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 Gene3D G3DSA:1.20.58.340 125 237 1.4E-27 T 11-10-2018 ABE28_007010 d48d59967bb58e114fc379738dc3a918 324 Gene3D G3DSA:3.30.460.20 3 124 1.4E-29 T 11-10-2018 ABE28_006245 87b2cc0c8a28d10f3dc195bc4c4ab8dd 153 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 23 118 3.4E-6 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_014970 cd6cefb0878882780e613a044e42ae3b 197 Pfam PF12685 SpoIIIAH-like protein 6 191 1.5E-31 T 11-10-2018 IPR024232 Stage III sporulation protein AH-like ABE28_014970 cd6cefb0878882780e613a044e42ae3b 197 Gene3D G3DSA:3.30.300.270 82 197 2.7E-32 T 11-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily ABE28_011245 f609fc9c3db09a5369e6998f673f553d 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.8E-42 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ABE28_011245 f609fc9c3db09a5369e6998f673f553d 108 SUPERFAMILY SSF103481 8 107 3.53E-11 T 11-10-2018 ABE28_011245 f609fc9c3db09a5369e6998f673f553d 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 22.286 T 11-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 ABE28_021270 0b83fb5feb278adf3486472e822f21ce 397 SUPERFAMILY SSF103473 8 390 1.31E-57 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_021270 0b83fb5feb278adf3486472e822f21ce 397 ProSitePatterns PS00216 Sugar transport proteins signature 1. 272 288 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_021270 0b83fb5feb278adf3486472e822f21ce 397 Pfam PF07690 Major Facilitator Superfamily 18 235 5.3E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_021270 0b83fb5feb278adf3486472e822f21ce 397 Gene3D G3DSA:1.20.1250.20 9 394 6.7E-53 T 11-10-2018 ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 SMART SM00470 25 114 1.1E-36 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 SUPERFAMILY SSF110849 24 162 9.42E-35 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 Gene3D G3DSA:3.90.1530.30 38 100 6.2E-27 T 11-10-2018 ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 24 194 2.0E-63 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 Pfam PF02195 ParB-like nuclease domain 26 113 1.5E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin ABE28_023760 b9f5055a778e5d8b62988401f038a788 286 Gene3D G3DSA:1.10.10.2830 101 215 5.9E-37 T 11-10-2018 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 SUPERFAMILY SSF52172 1 133 1.18E-33 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 SUPERFAMILY SSF81606 178 378 1.12E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 Gene3D G3DSA:3.60.40.10 135 379 1.5E-46 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 190 379 6.7E-33 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 Pfam PF00072 Response regulator receiver domain 3 123 2.3E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 SMART SM00448 1 122 2.9E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 SMART SM00331 163 379 1.5E-18 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_001260 4b64144ce735deb5e7211d8d1e1f8782 380 Gene3D G3DSA:3.40.50.2300 1 128 8.5E-35 T 11-10-2018 ABE28_006745 4f2764ce7b1e076b58232ebb23de6212 138 Gene3D G3DSA:2.20.25.10 1 44 2.0E-19 T 11-10-2018 ABE28_006745 4f2764ce7b1e076b58232ebb23de6212 138 SUPERFAMILY SSF82784 4 137 3.14E-42 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ABE28_006745 4f2764ce7b1e076b58232ebb23de6212 138 Gene3D G3DSA:3.30.300.20 45 137 4.9E-35 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_006745 4f2764ce7b1e076b58232ebb23de6212 138 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 1.1E-55 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 ABE28_006745 4f2764ce7b1e076b58232ebb23de6212 138 Pfam PF02566 OsmC-like protein 41 135 1.9E-20 T 11-10-2018 IPR003718 OsmC/Ohr family ABE28_003335 8c31602561b6c8c8cbe905de154d0b3b 109 Pfam PF14278 Transcriptional regulator C-terminal region 6 79 8.0E-13 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type ABE28_003335 8c31602561b6c8c8cbe905de154d0b3b 109 Gene3D G3DSA:1.10.357.10 1 105 1.7E-12 T 11-10-2018 ABE28_006865 64058402c4c799eb3d79824d10509e4e 260 Pfam PF04029 2-phosphosulpholactate phosphatase 13 240 2.9E-58 T 11-10-2018 IPR005238 ComB-like GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 ABE28_006865 64058402c4c799eb3d79824d10509e4e 260 Gene3D G3DSA:3.90.1560.10 1 244 2.5E-63 T 11-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 ABE28_006865 64058402c4c799eb3d79824d10509e4e 260 SUPERFAMILY SSF142823 24 243 2.75E-50 T 11-10-2018 IPR036702 ComB-like superfamily GO:0000287|GO:0050532 KEGG: 00680+3.1.3.71 ABE28_001065 15bea5a437acd508171acf54bb16533a 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 259 3.0E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_001065 15bea5a437acd508171acf54bb16533a 267 SUPERFAMILY SSF161098 5 259 7.2E-46 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_001065 15bea5a437acd508171acf54bb16533a 267 Gene3D G3DSA:1.10.3720.10 5 265 3.9E-42 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 Gene3D G3DSA:3.90.470.10 1 113 1.5E-51 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.6E-38 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 30.963 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.6E-51 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000610 4f7d3fd3782294fab917b939933e1d2a 113 SUPERFAMILY SSF54843 1 112 3.79E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 ABE28_008845 021f84234ed48899c447474816e085ab 271 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 5 125 1.4E-47 T 11-10-2018 IPR010056 Phage replisome organiser, N-terminal domain ABE28_008845 021f84234ed48899c447474816e085ab 271 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 5 125 6.8E-42 T 11-10-2018 IPR010056 Phage replisome organiser, N-terminal domain ABE28_012220 edde1897df5ba63f0eba610165840117 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 212 9.5E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_012220 edde1897df5ba63f0eba610165840117 216 SUPERFAMILY SSF161098 15 201 4.45E-43 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012220 edde1897df5ba63f0eba610165840117 216 Gene3D G3DSA:1.10.3720.10 7 216 3.3E-52 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012220 edde1897df5ba63f0eba610165840117 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 1.4E-28 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 Gene3D G3DSA:1.10.287.90 24 110 8.3E-22 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 SUPERFAMILY SSF49503 122 266 3.0E-37 T 11-10-2018 IPR008972 Cupredoxin ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 SUPERFAMILY SSF81464 26 108 2.94E-15 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 11 236 9.9E-76 T 11-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 Gene3D G3DSA:2.60.40.420 111 266 1.9E-35 T 11-10-2018 IPR008972 Cupredoxin ABE28_019735 781f26ea91d95d8223987701fb3547d8 300 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 32 105 1.9E-4 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_018030 666dbcf172a9a2187126f5811431887f 254 SMART SM00382 29 232 5.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018030 666dbcf172a9a2187126f5811431887f 254 Pfam PF00005 ABC transporter 20 177 2.3E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018030 666dbcf172a9a2187126f5811431887f 254 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_018030 666dbcf172a9a2187126f5811431887f 254 SUPERFAMILY SSF52540 3 249 1.57E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018030 666dbcf172a9a2187126f5811431887f 254 Gene3D G3DSA:3.40.50.300 1 253 1.2E-73 T 11-10-2018 ABE28_008070 a07c26630d71f9cc8f37ba600a29fe2b 151 SMART SM00260 2 139 7.7E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_008070 a07c26630d71f9cc8f37ba600a29fe2b 151 Pfam PF01584 CheW-like domain 7 139 1.1E-32 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 ABE28_008070 a07c26630d71f9cc8f37ba600a29fe2b 151 SUPERFAMILY SSF50341 3 140 2.22E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 ABE28_008070 a07c26630d71f9cc8f37ba600a29fe2b 151 Gene3D G3DSA:2.40.50.180 25 134 3.8E-40 T 11-10-2018 ABE28_008070 a07c26630d71f9cc8f37ba600a29fe2b 151 Gene3D G3DSA:2.30.30.40 8 133 3.8E-40 T 11-10-2018 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 SUPERFAMILY SSF53067 4 249 5.02E-69 T 11-10-2018 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 Gene3D G3DSA:3.30.420.40 250 512 3.2E-89 T 11-10-2018 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 248 3.1E-73 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 PIRSF PIRSF000538 2 504 4.0E-146 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 508 2.6E-234 T 11-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 SUPERFAMILY SSF53067 251 496 1.47E-66 T 11-10-2018 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 133 145 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 365 385 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 Gene3D G3DSA:3.30.420.40 2 248 6.1E-82 T 11-10-2018 ABE28_023210 87cd2aca2349a12eaf245070b6471b78 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 452 1.6E-35 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ABE28_007410 dd67d44401fc761e83f33fa716241922 279 Pfam PF01734 Patatin-like phospholipase 22 178 4.2E-22 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 ABE28_007410 dd67d44401fc761e83f33fa716241922 279 Gene3D G3DSA:3.40.1090.10 112 232 4.6E-21 T 11-10-2018 ABE28_007410 dd67d44401fc761e83f33fa716241922 279 Gene3D G3DSA:3.40.1090.10 6 111 1.1E-27 T 11-10-2018 ABE28_007410 dd67d44401fc761e83f33fa716241922 279 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 25 57 - T 11-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 ABE28_007410 dd67d44401fc761e83f33fa716241922 279 SUPERFAMILY SSF52151 15 268 2.62E-58 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase ABE28_014505 1f11d5738888ebc200e1b30d94503a78 175 Pfam PF07670 Nucleoside recognition 44 143 6.3E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABE28_016100 5d98fb1ba7f462e60f20e7b812dc41c8 320 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 288 3.8E-46 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_004810 bb477fb4bf007397b982475e6c067bd5 206 Gene3D G3DSA:1.20.58.220 10 206 8.8E-54 T 11-10-2018 IPR038078 PhoU-like domain superfamily ABE28_004810 bb477fb4bf007397b982475e6c067bd5 206 Pfam PF01865 Protein of unknown function DUF47 20 203 5.6E-24 T 11-10-2018 IPR018445 Putative phosphate transport regulator ABE28_004810 bb477fb4bf007397b982475e6c067bd5 206 SUPERFAMILY SSF109755 105 198 4.71E-5 T 11-10-2018 ABE28_007515 3d3431f113581caac6295595a8c6ef0c 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 1.8E-178 T 11-10-2018 IPR013438 Sporulation stage V, protein E ABE28_007515 3d3431f113581caac6295595a8c6ef0c 366 Pfam PF01098 Cell cycle protein 12 365 3.6E-127 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007515 3d3431f113581caac6295595a8c6ef0c 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007515 3d3431f113581caac6295595a8c6ef0c 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 363 2.2E-131 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 Pfam PF13638 PIN domain 6 148 4.2E-34 T 11-10-2018 IPR002716 PIN domain ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 Gene3D G3DSA:3.40.50.1010 1 151 2.4E-23 T 11-10-2018 ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 SMART SM00670 4 136 4.2E-25 T 11-10-2018 IPR002716 PIN domain ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 SUPERFAMILY SSF52540 24 421 5.31E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 Pfam PF02562 PhoH-like protein 234 436 1.2E-54 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 ABE28_007280 4f0659878ffd6990ebc42a2b1488f486 443 Gene3D G3DSA:3.40.50.300 232 442 6.4E-69 T 11-10-2018 ABE28_004285 51df213c446f196444ea1d389b418b6c 439 PIRSF PIRSF005690 1 437 3.0E-99 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_004285 51df213c446f196444ea1d389b418b6c 439 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 8 430 3.8E-94 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 Gene3D G3DSA:3.40.50.720 1 279 4.2E-78 T 11-10-2018 ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.3E-22 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 SUPERFAMILY SSF51735 1 251 6.59E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 Pfam PF00106 short chain dehydrogenase 4 202 6.8E-36 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 4.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 4.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019040 fc73e51d222b3b24eefebeecf9a83d31 280 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.5E-6 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Pfam PF00326 Prolyl oligopeptidase family 449 657 1.3E-52 T 11-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Gene3D G3DSA:3.40.50.1820 404 657 4.2E-70 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Pfam PF07676 WD40-like Beta Propeller Repeat 58 91 2.1E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Pfam PF07676 WD40-like Beta Propeller Repeat 230 252 0.011 T 11-10-2018 IPR011659 WD40-like Beta Propeller ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Gene3D G3DSA:2.120.10.30 1 157 9.6E-27 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 Gene3D G3DSA:2.120.10.30 158 294 1.8E-16 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 SUPERFAMILY SSF53474 402 657 2.03E-64 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_012740 fd158de4eea597da2396dd85412ce7e7 657 SUPERFAMILY SSF82171 12 394 4.32E-42 T 11-10-2018 ABE28_005105 3266ff2c6adc25e57d1a068b6b790c42 266 TIGRFAM TIGR02158 PA_CoA_Oxy3: phenylacetate-CoA oxygenase, PaaI subunit 18 266 1.1E-66 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ABE28_005105 3266ff2c6adc25e57d1a068b6b790c42 266 PIRSF PIRSF037834 2 266 3.1E-84 T 11-10-2018 IPR011882 1,2-phenylacetyl-CoA epoxidase, subunit C GO:0010124 ABE28_005105 3266ff2c6adc25e57d1a068b6b790c42 266 Pfam PF05138 Phenylacetic acid catabolic protein 8 266 1.2E-60 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ABE28_005105 3266ff2c6adc25e57d1a068b6b790c42 266 SUPERFAMILY SSF47240 11 259 6.49E-55 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_005105 3266ff2c6adc25e57d1a068b6b790c42 266 Gene3D G3DSA:1.20.1260.10 2 266 4.9E-80 T 11-10-2018 IPR012347 Ferritin-like ABE28_000540 b77ea58dc61c4e9fd88941b5330c53d9 201 Gene3D G3DSA:3.40.50.150 6 201 3.1E-45 T 11-10-2018 ABE28_000540 b77ea58dc61c4e9fd88941b5330c53d9 201 Pfam PF05175 Methyltransferase small domain 28 196 5.3E-50 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABE28_000540 b77ea58dc61c4e9fd88941b5330c53d9 201 SUPERFAMILY SSF53335 7 199 3.32E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 246 3.8E-61 T 11-10-2018 ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 Gene3D G3DSA:3.40.50.1000 2 246 9.7E-84 T 11-10-2018 IPR023214 HAD superfamily ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 ProSitePatterns PS01229 Hypothetical cof family signature 2. 203 225 - T 11-10-2018 ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 247 1.9E-63 T 11-10-2018 IPR000150 Cof family GO:0016787 ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 222 4.4E-24 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 SUPERFAMILY SSF56784 2 253 4.32E-70 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_007130 988373cb51f49a6ab78f0f0186b22c88 255 Gene3D G3DSA:3.30.1240.10 79 178 9.7E-84 T 11-10-2018 ABE28_001240 8fb20072af46c9e1faa52e672d88c210 123 SUPERFAMILY SSF46955 2 94 6.59E-18 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily ABE28_001240 8fb20072af46c9e1faa52e672d88c210 123 SMART SM00422 1 61 1.8E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_001240 8fb20072af46c9e1faa52e672d88c210 123 Pfam PF13411 MerR HTH family regulatory protein 2 60 8.6E-14 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 ABE28_001240 8fb20072af46c9e1faa52e672d88c210 123 Gene3D G3DSA:1.10.1660.10 1 118 6.7E-21 T 11-10-2018 ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 2.1E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 94 1.0E-29 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 Gene3D G3DSA:3.30.160.100 1 97 1.8E-34 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 127 181 2.0E-28 T 11-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 185 25.352 T 11-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 Gene3D G3DSA:3.30.505.50 139 185 7.3E-27 T 11-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily ABE28_022400 0f5aca42d7e213695c215b7e7e44e26f 185 SUPERFAMILY SSF69754 1 103 5.23E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like ABE28_013545 e07aa70172e360e71c1d908c25dc9536 211 Gene3D G3DSA:2.60.120.620 16 208 1.8E-62 T 11-10-2018 ABE28_013545 e07aa70172e360e71c1d908c25dc9536 211 Pfam PF13640 2OG-Fe(II) oxygenase superfamily 112 207 1.1E-17 T 11-10-2018 IPR005123 Oxoglutarate/iron-dependent dioxygenase GO:0016491|GO:0055114 ABE28_013545 e07aa70172e360e71c1d908c25dc9536 211 SMART SM00702 35 207 2.3E-40 T 11-10-2018 IPR006620 Prolyl 4-hydroxylase, alpha subunit GO:0005506|GO:0016705|GO:0031418|GO:0055114 ABE28_018305 b2a3a8588e33681f2745f93470350565 179 Gene3D G3DSA:1.10.101.10 31 112 4.3E-25 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_018305 b2a3a8588e33681f2745f93470350565 179 SUPERFAMILY SSF47090 38 104 2.41E-19 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_018305 b2a3a8588e33681f2745f93470350565 179 Pfam PF01471 Putative peptidoglycan binding domain 51 102 6.8E-13 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 SUPERFAMILY SSF63411 15 219 5.41E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 SUPERFAMILY SSF63411 248 427 8.5E-19 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 Gene3D G3DSA:3.30.830.10 238 427 2.7E-42 T 11-10-2018 ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 Gene3D G3DSA:3.30.830.10 7 237 5.2E-58 T 11-10-2018 ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 Pfam PF00675 Insulinase (Peptidase family M16) 63 174 6.6E-16 T 11-10-2018 IPR011765 Peptidase M16, N-terminal ABE28_008295 83a8610a167e4c999fced38dc941d3d6 428 Pfam PF05193 Peptidase M16 inactive domain 181 362 9.2E-20 T 11-10-2018 IPR007863 Peptidase M16, C-terminal ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 Pfam PF13484 4Fe-4S double cluster binding domain 187 250 1.1E-16 T 11-10-2018 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 Gene3D G3DSA:1.25.10.10 265 375 9.6E-10 T 11-10-2018 IPR011989 Armadillo-like helical ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 1.1E-16 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 SMART SM00567 E-Z type HEAT repeats 330 359 1.6 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 SMART SM00567 E-Z type HEAT repeats 298 327 99.0 T 11-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 SUPERFAMILY SSF54862 164 253 6.7E-16 T 11-10-2018 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 SUPERFAMILY SSF48371 266 372 3.53E-12 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 13 342 3.0E-126 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 ABE28_004550 89679f59cedd2a2c753918cb94d305a3 379 Pfam PF13646 HEAT repeats 300 372 6.4E-12 T 11-10-2018 ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 SUPERFAMILY SSF52172 1 180 3.98E-41 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 SMART SM00448 2 112 5.8E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 149 224 4.2E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 Gene3D G3DSA:1.10.10.10 127 229 4.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 SMART SM00862 148 224 8.8E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 Pfam PF00072 Response regulator receiver domain 4 112 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_005180 c35a9a0307758a4376d47caf32899de0 229 Gene3D G3DSA:3.40.50.2300 1 126 2.9E-36 T 11-10-2018 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 126 143 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 230 245 - T 11-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 Pfam PF00248 Aldo/keto reductase family 20 262 4.5E-57 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 SUPERFAMILY SSF51430 8 267 4.19E-100 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 Gene3D G3DSA:3.20.20.100 1 275 4.0E-128 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PRINTS PR00069 Aldo-keto reductase signature 40 64 1.9E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PRINTS PR00069 Aldo-keto reductase signature 96 114 1.9E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PRINTS PR00069 Aldo-keto reductase signature 197 221 1.9E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PRINTS PR00069 Aldo-keto reductase signature 160 189 1.9E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PRINTS PR00069 Aldo-keto reductase signature 126 143 1.9E-53 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004820 0a3c58bcc89ec541d4f800422a9ac169 276 PIRSF PIRSF000097 3 273 6.3E-99 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_019995 397d58052818060904f7ab6ee613009a 59 Gene3D G3DSA:3.10.180.10 2 54 9.8E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_019995 397d58052818060904f7ab6ee613009a 59 SUPERFAMILY SSF54593 7 47 3.66E-8 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_022805 b4341268cfb372dc083e3b5947228bb9 365 Gene3D G3DSA:1.10.645.20 4 365 3.1E-152 T 11-10-2018 IPR038290 NADH-quinone oxidoreductase, subunit D superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022805 b4341268cfb372dc083e3b5947228bb9 365 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 1 365 46.318 T 11-10-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022805 b4341268cfb372dc083e3b5947228bb9 365 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 291 364 4.6E-25 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022805 b4341268cfb372dc083e3b5947228bb9 365 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 120 290 5.3E-68 T 11-10-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022805 b4341268cfb372dc083e3b5947228bb9 365 SUPERFAMILY SSF56762 16 364 5.1E-119 T 11-10-2018 IPR029014 [NiFe]-hydrogenase, large subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_014370 ffad069f79ebe65cc23bcf6b56d5e510 61 Pfam PF17313 Family of unknown function (DUF5359) 1 56 4.1E-22 T 11-10-2018 IPR035281 Protein of unknown function DUF5359 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 55 70 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 123 135 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 71 90 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 40 55 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 90 107 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PRINTS PR01034 Ribosomal protein S12 signature 107 123 2.4E-59 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 Pfam PF00164 Ribosomal protein S12/S23 32 136 2.1E-38 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 Gene3D G3DSA:2.40.50.140 1 140 9.2E-63 T 11-10-2018 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 SUPERFAMILY SSF50249 2 136 3.34E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.775 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 5.5E-69 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000560 4237afcc4707376aedb86cf3eaffb80d 140 PIRSF PIRSF002133 1 137 2.4E-49 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 Pfam PF00582 Universal stress protein family 5 141 3.2E-29 T 11-10-2018 IPR006016 UspA ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 PRINTS PR01438 Universal stress protein signature 119 141 8.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 PRINTS PR01438 Universal stress protein signature 3 21 8.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 PRINTS PR01438 Universal stress protein signature 102 114 8.6E-17 T 11-10-2018 IPR006015 Universal stress protein A ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 SUPERFAMILY SSF52402 5 141 2.68E-32 T 11-10-2018 ABE28_003555 48aa24747605d58b136ba49c274e20c6 141 Gene3D G3DSA:3.40.50.620 3 141 1.5E-32 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 799 0.0 T 11-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 Pfam PF13244 Domain of unknown function (DUF4040) 636 699 2.1E-20 T 11-10-2018 IPR025383 Domain of unknown function DUF4040 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 116 5.3E-11 T 11-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 Pfam PF00361 Proton-conducting membrane transporter 129 421 5.1E-68 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 436 455 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 3.4E-44 T 11-10-2018 ABE28_021465 e519f15f0d8fd65a4d5972695b2146a7 801 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 3.4E-44 T 11-10-2018 ABE28_005650 7da654128b335c437044dc10a16f4279 402 SUPERFAMILY SSF56300 5 279 1.14E-53 T 11-10-2018 ABE28_005650 7da654128b335c437044dc10a16f4279 402 Gene3D G3DSA:3.60.21.10 2 250 4.1E-59 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_005650 7da654128b335c437044dc10a16f4279 402 PIRSF PIRSF033091 1 402 3.9E-128 T 11-10-2018 IPR014576 Predicted phosphoesterase, YhaO type ABE28_005650 7da654128b335c437044dc10a16f4279 402 Pfam PF00149 Calcineurin-like phosphoesterase 5 201 1.2E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_008560 2a2d04a4577a850798f029001cba41c6 317 Pfam PF00892 EamA-like transporter family 11 156 5.3E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_008560 2a2d04a4577a850798f029001cba41c6 317 Pfam PF00892 EamA-like transporter family 170 309 1.1E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_008560 2a2d04a4577a850798f029001cba41c6 317 SUPERFAMILY SSF103481 228 311 1.07E-7 T 11-10-2018 ABE28_008560 2a2d04a4577a850798f029001cba41c6 317 SUPERFAMILY SSF103481 78 159 1.7E-11 T 11-10-2018 ABE28_011770 32464a305bbc2da61f04425cf99137b5 312 Gene3D G3DSA:3.60.15.10 4 254 1.7E-59 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011770 32464a305bbc2da61f04425cf99137b5 312 Pfam PF00753 Metallo-beta-lactamase superfamily 21 227 1.1E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_011770 32464a305bbc2da61f04425cf99137b5 312 SUPERFAMILY SSF56281 11 310 1.97E-56 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011770 32464a305bbc2da61f04425cf99137b5 312 SMART SM00849 20 227 3.2E-24 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_011770 32464a305bbc2da61f04425cf99137b5 312 Gene3D G3DSA:1.10.10.10 258 306 2.4E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019680 23f67525580a3bcb2a771830fc2743c0 327 Gene3D G3DSA:3.90.550.10 1 199 3.0E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_019680 23f67525580a3bcb2a771830fc2743c0 327 SUPERFAMILY SSF53448 3 209 9.72E-46 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_019680 23f67525580a3bcb2a771830fc2743c0 327 Pfam PF00535 Glycosyl transferase family 2 6 135 9.1E-32 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 SUPERFAMILY SSF54680 331 432 2.09E-27 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 SUPERFAMILY SSF52418 69 329 3.14E-91 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 PIRSF PIRSF000478 1 433 6.7E-167 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 417 2.1E-23 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 2.2E-177 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Gene3D G3DSA:1.20.970.10 1 67 3.8E-31 T 11-10-2018 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 SUPERFAMILY SSF47648 1 69 1.44E-23 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Gene3D G3DSA:3.90.1170.30 331 419 5.4E-150 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 SMART SM00941 345 418 5.1E-29 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 1.3E-23 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 2.3E-45 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_014620 448424ac65c4a9233e92fe3d1ec3b8fc 434 Gene3D G3DSA:3.40.1030.10 77 330 5.4E-150 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 1.4E-88 T 11-10-2018 IPR014213 Sporulation stage V, protein T ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 11-10-2018 ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 PIRSF PIRSF026579 1 178 4.7E-93 T 11-10-2018 IPR014213 Sporulation stage V, protein T ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 SMART SM00966 8 52 1.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 11-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 1.2E-45 T 11-10-2018 IPR039472 Sporulation stage V protein T, GAF domain ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 11-10-2018 IPR037914 SpoVT-AbrB domain superfamily ABE28_000280 9a41e9ee8580c68dd4ec32e3fca071f7 178 Gene3D G3DSA:3.30.450.40 56 178 3.9E-46 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 Gene3D G3DSA:3.40.630.10 5 336 1.4E-86 T 11-10-2018 ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 SUPERFAMILY SSF55031 161 257 1.41E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 Pfam PF01546 Peptidase family M20/M25/M40 63 348 7.7E-25 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 Gene3D G3DSA:3.30.70.360 160 269 1.4E-86 T 11-10-2018 ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 SUPERFAMILY SSF53187 3 351 4.86E-52 T 11-10-2018 ABE28_002465 19ae3fb0c89d77cc06d26ee8838c239f 354 Pfam PF07687 Peptidase dimerisation domain 159 257 1.5E-19 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 Gene3D G3DSA:1.20.1560.10 10 346 2.5E-97 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 Pfam PF00005 ABC transporter 377 525 5.9E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 Gene3D G3DSA:3.40.50.300 352 602 5.3E-92 T 11-10-2018 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 SUPERFAMILY SSF90123 37 343 2.75E-86 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 SUPERFAMILY SSF52540 352 596 7.28E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 ProSitePatterns PS00211 ABC transporters family signature. 497 511 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 Pfam PF00664 ABC transporter transmembrane region 44 314 9.5E-61 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_006645 50954b6011d223cb9f9f51e29bd06c31 603 SMART SM00382 385 571 1.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_017565 f5497ebeeb9aa128a02a06cdcf1361ee 344 Pfam PF03773 Predicted permease 49 335 7.7E-64 T 11-10-2018 IPR005524 Predicted permease DUF318 ABE28_023455 d26a734f86192c00b100ca310957df3a 246 SMART SM00382 34 227 3.2E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023455 d26a734f86192c00b100ca310957df3a 246 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_023455 d26a734f86192c00b100ca310957df3a 246 SUPERFAMILY SSF52540 5 226 5.58E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023455 d26a734f86192c00b100ca310957df3a 246 Pfam PF00005 ABC transporter 25 173 3.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023455 d26a734f86192c00b100ca310957df3a 246 Gene3D G3DSA:3.40.50.300 3 240 2.3E-71 T 11-10-2018 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 PRINTS PR00956 Flagellar motor switch protein FliN signature 370 385 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 PRINTS PR00956 Flagellar motor switch protein FliN signature 324 340 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 PRINTS PR00956 Flagellar motor switch protein FliN signature 357 370 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 PRINTS PR00956 Flagellar motor switch protein FliN signature 341 357 4.1E-30 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 324 394 3.1E-25 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 SUPERFAMILY SSF103039 33 223 1.66E-48 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 Gene3D G3DSA:2.30.330.10 312 404 1.3E-36 T 11-10-2018 IPR036429 SpoA-like superfamily ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 SUPERFAMILY SSF101801 321 402 3.79E-25 T 11-10-2018 IPR036429 SpoA-like superfamily ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 Gene3D G3DSA:3.40.1550.10 33 229 2.2E-51 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 Pfam PF04509 CheC-like family 135 170 4.9E-15 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 Pfam PF04509 CheC-like family 38 74 2.9E-16 T 11-10-2018 IPR007597 CheC-like protein GO:0016787 ABE28_008010 22458ceed7ff96de2b1114f3d8955d39 404 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 321 396 1.7E-32 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 ABE28_022675 287b049629f910e7543269862e620ff1 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 456 1.1E-113 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_022675 287b049629f910e7543269862e620ff1 537 Gene3D G3DSA:3.40.190.10 212 524 1.8E-177 T 11-10-2018 ABE28_022675 287b049629f910e7543269862e620ff1 537 PIRSF PIRSF002741 1 537 1.4E-150 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_022675 287b049629f910e7543269862e620ff1 537 SUPERFAMILY SSF53850 38 532 2.27E-159 T 11-10-2018 ABE28_022675 287b049629f910e7543269862e620ff1 537 Gene3D G3DSA:3.90.76.10 57 211 1.8E-177 T 11-10-2018 ABE28_022675 287b049629f910e7543269862e620ff1 537 Gene3D G3DSA:3.10.105.10 294 511 1.8E-177 T 11-10-2018 ABE28_013575 d770bd0fa9d74e98fa503b8b02f1d113 432 Gene3D G3DSA:3.40.190.10 28 432 4.4E-81 T 11-10-2018 ABE28_013575 d770bd0fa9d74e98fa503b8b02f1d113 432 SUPERFAMILY SSF53850 34 424 6.73E-72 T 11-10-2018 ABE28_013575 d770bd0fa9d74e98fa503b8b02f1d113 432 Pfam PF13416 Bacterial extracellular solute-binding protein 59 368 1.5E-35 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_013575 d770bd0fa9d74e98fa503b8b02f1d113 432 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 146 163 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 ABE28_010560 3828f59f36a1f4dee34c1f231a944901 409 Pfam PF01566 Natural resistance-associated macrophage protein 57 377 1.1E-19 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 ABE28_003115 2f9ef1883f41c0fc9bba6fba5455a760 245 SUPERFAMILY SSF56281 1 239 3.58E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_003115 2f9ef1883f41c0fc9bba6fba5455a760 245 Pfam PF12706 Beta-lactamase superfamily domain 24 210 6.3E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_003115 2f9ef1883f41c0fc9bba6fba5455a760 245 Gene3D G3DSA:3.60.15.10 7 242 2.2E-39 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_003115 2f9ef1883f41c0fc9bba6fba5455a760 245 SMART SM00849 11 183 5.5E-10 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 Gene3D G3DSA:3.40.605.10 29 482 7.1E-166 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 Gene3D G3DSA:3.40.309.10 258 452 7.1E-166 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 SUPERFAMILY SSF53720 9 487 1.44E-157 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_011525 ca950713f200f0fb56372a536c76e3ec 489 Pfam PF00171 Aldehyde dehydrogenase family 18 484 7.9E-168 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_001005 eb51ec8b4625bef934f6996c55f3e463 288 Gene3D G3DSA:3.30.420.10 129 271 1.7E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_001005 eb51ec8b4625bef934f6996c55f3e463 288 Pfam PF13276 HTH-like domain 54 106 3.4E-17 T 11-10-2018 IPR025948 HTH-like domain ABE28_001005 eb51ec8b4625bef934f6996c55f3e463 288 Pfam PF00665 Integrase core domain 132 241 3.7E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_001005 eb51ec8b4625bef934f6996c55f3e463 288 SUPERFAMILY SSF53098 122 281 6.98E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_013230 eb51ec8b4625bef934f6996c55f3e463 288 Gene3D G3DSA:3.30.420.10 129 271 1.7E-8 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_013230 eb51ec8b4625bef934f6996c55f3e463 288 Pfam PF13276 HTH-like domain 54 106 3.4E-17 T 11-10-2018 IPR025948 HTH-like domain ABE28_013230 eb51ec8b4625bef934f6996c55f3e463 288 Pfam PF00665 Integrase core domain 132 241 3.7E-23 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_013230 eb51ec8b4625bef934f6996c55f3e463 288 SUPERFAMILY SSF53098 122 281 6.98E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_000370 837301c018882ad6c236b6569ede8e14 298 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 185 206 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 ABE28_000370 837301c018882ad6c236b6569ede8e14 298 SUPERFAMILY SSF109998 39 187 1.92E-22 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily ABE28_000370 837301c018882ad6c236b6569ede8e14 298 Pfam PF13145 PPIC-type PPIASE domain 140 262 9.0E-19 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 ABE28_000370 837301c018882ad6c236b6569ede8e14 298 Gene3D G3DSA:1.10.4030.30 59 253 5.0E-31 T 11-10-2018 ABE28_000370 837301c018882ad6c236b6569ede8e14 298 Gene3D G3DSA:3.10.50.40 157 250 5.0E-31 T 11-10-2018 ABE28_000370 837301c018882ad6c236b6569ede8e14 298 SUPERFAMILY SSF54534 153 250 2.9E-19 T 11-10-2018 ABE28_000370 837301c018882ad6c236b6569ede8e14 298 Pfam PF13624 SurA N-terminal domain 36 124 9.2E-7 T 11-10-2018 ABE28_011350 888b3513a17b1dbaf3716c3540714bc6 77 Pfam PF11755 Protein of unknown function (DUF3311) 18 71 3.5E-18 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 Gene3D G3DSA:1.20.810.10 13 171 2.2E-26 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 PIRSF PIRSF036636 1 255 1.8E-142 T 11-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 SUPERFAMILY SSF81648 16 156 7.59E-31 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 Gene3D G3DSA:1.10.760.10 182 251 4.3E-14 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 159 1.0E-10 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 SUPERFAMILY SSF46626 136 253 5.53E-13 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 ABE28_014200 7be30a345e8c7ff2d4045084c9ff5bea 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 249 2.1E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_011780 c28ad7d34d48c67d4e12f178d240ad3a 372 Gene3D G3DSA:3.50.50.60 5 351 1.1E-80 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011780 c28ad7d34d48c67d4e12f178d240ad3a 372 SUPERFAMILY SSF51905 2 367 1.94E-46 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011780 c28ad7d34d48c67d4e12f178d240ad3a 372 Pfam PF01266 FAD dependent oxidoreductase 3 351 1.8E-53 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 ABE28_011780 c28ad7d34d48c67d4e12f178d240ad3a 372 SUPERFAMILY SSF54373 224 312 1.44E-11 T 11-10-2018 ABE28_011780 c28ad7d34d48c67d4e12f178d240ad3a 372 Gene3D G3DSA:3.30.9.10 88 311 1.1E-80 T 11-10-2018 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 Gene3D G3DSA:1.10.10.10 3 141 4.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 SUPERFAMILY SSF46785 29 140 3.79E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 SMART SM00347 25 125 3.2E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010425 075202d7743b7b7af8421b8aa021835e 141 Pfam PF01047 MarR family 37 90 6.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 Pfam PF00849 RNA pseudouridylate synthase 88 242 9.7E-39 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 SUPERFAMILY SSF55120 74 301 4.93E-80 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 SMART SM00363 15 72 8.4E-6 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 301 9.4E-104 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 Gene3D G3DSA:3.10.290.10 4 71 1.1E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 SUPERFAMILY SSF55174 14 101 1.26E-13 T 11-10-2018 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 Gene3D G3DSA:3.30.2350.10 81 304 1.8E-77 T 11-10-2018 ABE28_007600 2e65fbffdead82c6cc23ee1345e90b88 305 Pfam PF01479 S4 domain 15 60 1.1E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_021790 39a0373f3afb507f75f4e1acb97c3d21 116 SUPERFAMILY SSF110455 6 111 3.4E-30 T 11-10-2018 ABE28_021790 39a0373f3afb507f75f4e1acb97c3d21 116 SMART SM00493 7 81 1.3E-7 T 11-10-2018 IPR006171 TOPRIM domain ABE28_021790 39a0373f3afb507f75f4e1acb97c3d21 116 Pfam PF01751 Toprim domain 9 75 1.3E-5 T 11-10-2018 IPR006171 TOPRIM domain ABE28_021790 39a0373f3afb507f75f4e1acb97c3d21 116 Gene3D G3DSA:3.40.1360.20 5 116 6.3E-42 T 11-10-2018 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 PRINTS PR01100 Shikimate kinase family signature 37 50 1.7E-14 T 11-10-2018 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 PRINTS PR01100 Shikimate kinase family signature 65 73 1.7E-14 T 11-10-2018 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 PRINTS PR01100 Shikimate kinase family signature 83 92 1.7E-14 T 11-10-2018 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 PRINTS PR01100 Shikimate kinase family signature 13 28 1.7E-14 T 11-10-2018 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 ProSitePatterns PS01128 Shikimate kinase signature. 66 91 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 Pfam PF01202 Shikimate kinase 19 174 7.4E-41 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 Hamap MF_00109 Shikimate kinase [aroK]. 10 175 23.079 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 SUPERFAMILY SSF52540 13 171 2.33E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001860 4fdf6d158c0139539757ad9aa51b7471 185 Gene3D G3DSA:3.40.50.300 8 180 3.6E-42 T 11-10-2018 ABE28_003005 58bc9413ff48cbf47994331158b6167b 274 SUPERFAMILY SSF53850 42 270 6.99E-48 T 11-10-2018 ABE28_003005 58bc9413ff48cbf47994331158b6167b 274 SMART SM00062 42 269 1.0E-61 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003005 58bc9413ff48cbf47994331158b6167b 274 Gene3D G3DSA:3.40.190.10 111 231 1.5E-75 T 11-10-2018 ABE28_003005 58bc9413ff48cbf47994331158b6167b 274 Gene3D G3DSA:3.40.190.10 45 267 1.5E-75 T 11-10-2018 ABE28_003005 58bc9413ff48cbf47994331158b6167b 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 267 4.0E-50 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_009920 f74c8460138597e0f100596daa760aa6 74 Gene3D G3DSA:1.10.260.40 2 73 9.9E-11 T 11-10-2018 ABE28_009920 f74c8460138597e0f100596daa760aa6 74 SUPERFAMILY SSF47413 4 69 1.21E-12 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_009920 f74c8460138597e0f100596daa760aa6 74 Pfam PF01381 Helix-turn-helix 8 61 5.7E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_009920 f74c8460138597e0f100596daa760aa6 74 SMART SM00530 7 62 1.4E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_002620 fee4f2817db1a6e8bfe25cfc448c722f 502 Pfam PF01593 Flavin containing amine oxidoreductase 17 494 8.4E-24 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_002620 fee4f2817db1a6e8bfe25cfc448c722f 502 SUPERFAMILY SSF51905 6 496 3.24E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002620 fee4f2817db1a6e8bfe25cfc448c722f 502 Gene3D G3DSA:3.50.50.60 7 118 1.0E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002620 fee4f2817db1a6e8bfe25cfc448c722f 502 Gene3D G3DSA:3.50.50.60 207 333 4.8E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_002620 fee4f2817db1a6e8bfe25cfc448c722f 502 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 10 497 2.0E-112 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 ABE28_005920 fadacff2ced3e0340be850b3d5490873 188 ProDom PD106196 YISN IG BH1722 5 178 3.0E-32 T 11-10-2018 IPR024488 Protein of unknown function DUF2777 ABE28_005920 fadacff2ced3e0340be850b3d5490873 188 Pfam PF10949 Protein of unknown function (DUF2777) 4 183 5.8E-65 T 11-10-2018 IPR024488 Protein of unknown function DUF2777 ABE28_016965 0746f578a1f04ca5968077766f4452df 153 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 1.0E-39 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABE28_016965 0746f578a1f04ca5968077766f4452df 153 Pfam PF04284 Protein of unknown function (DUF441) 8 146 1.8E-47 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABE28_016965 0746f578a1f04ca5968077766f4452df 153 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 18.352 T 11-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 32 501 3.4E-142 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 SMART SM00155 414 441 6.2E-8 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 SMART SM00155 237 264 2.1E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Pfam PF13091 PLD-like domain 343 464 2.5E-25 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Pfam PF13091 PLD-like domain 154 276 5.9E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Hamap MF_01916 Cardiolipin synthase. 34 501 38.828 T 11-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 SUPERFAMILY SSF56024 115 331 8.48E-50 T 11-10-2018 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 SUPERFAMILY SSF56024 289 484 4.93E-43 T 11-10-2018 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Gene3D G3DSA:3.30.870.10 328 472 9.2E-26 T 11-10-2018 ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Pfam PF13396 Phospholipase_D-nuclease N-terminal 38 82 6.0E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ABE28_012000 7382642367c53cae366d69d2f7b8fe37 501 Gene3D G3DSA:3.30.870.10 131 320 6.6E-43 T 11-10-2018 ABE28_018165 54d24f752d72e872e2882312f4b598bd 274 SUPERFAMILY SSF141571 50 266 3.4E-21 T 11-10-2018 ABE28_018165 54d24f752d72e872e2882312f4b598bd 274 Gene3D G3DSA:2.160.20.80 149 265 6.4E-18 T 11-10-2018 ABE28_018165 54d24f752d72e872e2882312f4b598bd 274 Pfam PF00805 Pentapeptide repeats (8 copies) 188 221 1.0E-8 T 11-10-2018 IPR001646 Pentapeptide repeat ABE28_013385 c8d82667d9c15b0368d171e6d65bb89a 176 SUPERFAMILY SSF53597 6 174 2.23E-29 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_013385 c8d82667d9c15b0368d171e6d65bb89a 176 Gene3D G3DSA:3.40.430.10 3 176 2.6E-40 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_013385 c8d82667d9c15b0368d171e6d65bb89a 176 Pfam PF01872 RibD C-terminal domain 6 167 3.9E-17 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ABE28_015830 29543aac69678125df8f8a19d0b9d47e 125 Gene3D G3DSA:1.10.10.10 8 125 3.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015830 29543aac69678125df8f8a19d0b9d47e 125 SUPERFAMILY SSF46785 4 78 1.85E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015830 29543aac69678125df8f8a19d0b9d47e 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 7.0E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_015830 29543aac69678125df8f8a19d0b9d47e 125 SMART SM00345 15 74 2.9E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 PIRSF PIRSF006232 25 279 6.6E-69 T 11-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 SUPERFAMILY SSF51182 33 279 1.11E-64 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 Gene3D G3DSA:2.60.120.10 142 249 3.5E-75 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 Gene3D G3DSA:2.60.120.10 36 276 3.5E-75 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 Pfam PF05726 Pirin C-terminal cupin domain 173 279 3.2E-28 T 11-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 ABE28_020555 7ab96804022b342cbd43a8cf778fe55c 279 Pfam PF02678 Pirin 48 120 4.3E-22 T 11-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 Gene3D G3DSA:3.90.640.10 178 251 3.6E-126 T 11-10-2018 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 Gene3D G3DSA:3.30.420.40 146 309 3.6E-126 T 11-10-2018 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 3.0E-58 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 Pfam PF06723 MreB/Mbl protein 4 327 1.5E-150 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 2.1E-136 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 SUPERFAMILY SSF53067 3 140 5.7E-39 T 11-10-2018 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 Gene3D G3DSA:3.30.420.40 6 319 3.6E-126 T 11-10-2018 ABE28_022730 9a7edf3f7ed7de8f351b1aca4922261d 333 SUPERFAMILY SSF53067 142 325 8.43E-49 T 11-10-2018 ABE28_012675 69cda39ffc99347f609853b20e6bfc79 323 SUPERFAMILY SSF53474 20 299 3.08E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_012675 69cda39ffc99347f609853b20e6bfc79 323 Pfam PF00561 alpha/beta hydrolase fold 46 299 1.1E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004575 91c66f7b97320f0a94a66432abe74ce5 306 Pfam PF01497 Periplasmic binding protein 63 281 1.5E-28 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_004575 91c66f7b97320f0a94a66432abe74ce5 306 SUPERFAMILY SSF53807 40 299 4.32E-48 T 11-10-2018 ABE28_004575 91c66f7b97320f0a94a66432abe74ce5 306 Gene3D G3DSA:3.40.50.1980 138 306 4.4E-58 T 11-10-2018 ABE28_004575 91c66f7b97320f0a94a66432abe74ce5 306 Gene3D G3DSA:3.40.50.1980 51 137 2.4E-22 T 11-10-2018 ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 257 1.0E-67 T 11-10-2018 ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 185 202 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 138 154 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 183 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 3.9E-42 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 151 179 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 SUPERFAMILY SSF51735 14 258 4.56E-90 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 Gene3D G3DSA:3.40.50.720 4 258 4.0E-89 T 11-10-2018 ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 91 102 4.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 164 183 4.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_019250 d54629a2bead772fa532c242ee0d8d26 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 144 152 4.1E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 Gene3D G3DSA:3.40.50.12780 1 423 2.5E-110 T 11-10-2018 ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 Pfam PF00501 AMP-binding enzyme 13 428 6.0E-100 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 Gene3D G3DSA:3.30.300.310 424 526 2.1E-35 T 11-10-2018 ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 SUPERFAMILY SSF56801 5 523 6.15E-145 T 11-10-2018 ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 ProSitePatterns PS00455 Putative AMP-binding domain signature. 171 182 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_010865 bbbbee0aa1b915253717088e0de5de33 530 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 512 3.6E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_017975 2acb64393c50e43daea6b0183c1ec91d 84 Gene3D G3DSA:2.40.50.100 6 77 4.1E-5 T 11-10-2018 ABE28_017975 2acb64393c50e43daea6b0183c1ec91d 84 SUPERFAMILY SSF51230 5 74 4.32E-5 T 11-10-2018 IPR011053 Single hybrid motif ABE28_000775 d24938e04dc6aea3e86d55cd3acbd58c 238 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 4.6E-46 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_000775 d24938e04dc6aea3e86d55cd3acbd58c 238 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 9.7E-81 T 11-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 ABE28_000775 d24938e04dc6aea3e86d55cd3acbd58c 238 SMART SM00646 115 226 1.2E-31 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 ABE28_000775 d24938e04dc6aea3e86d55cd3acbd58c 238 SUPERFAMILY SSF53187 41 230 3.45E-50 T 11-10-2018 ABE28_000775 d24938e04dc6aea3e86d55cd3acbd58c 238 Gene3D G3DSA:3.40.630.40 39 234 1.2E-54 T 11-10-2018 ABE28_012320 75fda4c5a3b3ec32cf47794d8954ccf8 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 31 83 5.0E-19 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain ABE28_012320 75fda4c5a3b3ec32cf47794d8954ccf8 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 124 309 5.1E-32 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_012320 75fda4c5a3b3ec32cf47794d8954ccf8 309 SUPERFAMILY SSF161098 102 288 1.16E-26 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012320 75fda4c5a3b3ec32cf47794d8954ccf8 309 Gene3D G3DSA:1.10.3720.10 96 309 6.2E-23 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_021115 917a794757529441d6cc6a37154e31db 146 Gene3D G3DSA:2.40.100.10 1 146 1.4E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021115 917a794757529441d6cc6a37154e31db 146 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 138 3.0E-40 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 SUPERFAMILY SSF50891 14 138 1.08E-45 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021115 917a794757529441d6cc6a37154e31db 146 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 3.3E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 3.3E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 3.3E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 3.3E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 3.3E-24 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 ABE28_021115 917a794757529441d6cc6a37154e31db 146 PIRSF PIRSF001467 6 145 2.2E-40 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 ABE28_003360 09cc63c5c39087222ef72d4181caea9e 119 SUPERFAMILY SSF159121 28 119 4.19E-29 T 11-10-2018 IPR036166 YxeA-like superfamily ABE28_003360 09cc63c5c39087222ef72d4181caea9e 119 Pfam PF06486 Protein of unknown function (DUF1093) 29 107 1.2E-22 T 11-10-2018 IPR006542 Protein of unknown function DUF1093 ABE28_003360 09cc63c5c39087222ef72d4181caea9e 119 Gene3D G3DSA:2.40.50.480 25 119 1.6E-31 T 11-10-2018 IPR036166 YxeA-like superfamily ABE28_003360 09cc63c5c39087222ef72d4181caea9e 119 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 7 118 9.1E-21 T 11-10-2018 IPR006542 Protein of unknown function DUF1093 ABE28_006195 7d19a3c3ad266c8743ef0e8a99fb6cd3 206 SMART SM00954 43 164 1.3E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ABE28_006195 7d19a3c3ad266c8743ef0e8a99fb6cd3 206 Pfam PF04607 Region found in RelA / SpoT proteins 43 161 3.1E-35 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 ABE28_006195 7d19a3c3ad266c8743ef0e8a99fb6cd3 206 SUPERFAMILY SSF81301 4 197 9.97E-57 T 11-10-2018 ABE28_006195 7d19a3c3ad266c8743ef0e8a99fb6cd3 206 Gene3D G3DSA:1.10.287.860 147 206 3.7E-27 T 11-10-2018 ABE28_006195 7d19a3c3ad266c8743ef0e8a99fb6cd3 206 Gene3D G3DSA:3.30.460.10 1 146 7.5E-50 T 11-10-2018 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 Gene3D G3DSA:3.40.605.10 18 463 4.7E-182 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 274 285 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 22 466 3.6E-197 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 Gene3D G3DSA:3.40.309.10 253 440 4.7E-182 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 SUPERFAMILY SSF53720 2 469 7.85E-169 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 PIRSF PIRSF036492 23 469 3.6E-86 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABE28_002445 aacfc01b1cc419be5a76d7bf503529cc 472 Pfam PF00171 Aldehyde dehydrogenase family 18 467 6.9E-172 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_009555 eaa16ca7af39f36f13329b8a40846f9f 465 SUPERFAMILY SSF51695 44 355 7.85E-53 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_009555 eaa16ca7af39f36f13329b8a40846f9f 465 SMART SM00148 52 204 7.9E-10 T 11-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain ABE28_009555 eaa16ca7af39f36f13329b8a40846f9f 465 Pfam PF00388 Phosphatidylinositol-specific phospholipase C, X domain 82 202 1.4E-10 T 11-10-2018 IPR000909 Phosphatidylinositol-specific phospholipase C, X domain ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 SMART SM00283 289 564 5.6E-78 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 SUPERFAMILY SSF58104 233 563 1.44E-69 T 11-10-2018 ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 167 6.5E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 SMART SM00304 207 260 1.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 355 517 6.8E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 Gene3D G3DSA:1.10.287.950 243 564 2.5E-69 T 11-10-2018 ABE28_017815 f29e8d7e2754ca0bff0fcbb3eca66a60 565 Pfam PF00672 HAMP domain 208 257 6.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-19 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.7E-30 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 SUPERFAMILY SSF55594 3 83 2.88E-27 T 11-10-2018 IPR035895 HPr-like superfamily ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 4.5E-30 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like ABE28_022175 1c3150bdea6c95cef73ece9a33966c39 85 Gene3D G3DSA:3.30.1340.10 1 84 6.1E-35 T 11-10-2018 IPR035895 HPr-like superfamily ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 PIRSF PIRSF000521 2 410 4.9E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 Pfam PF00202 Aminotransferase class-III 26 448 1.8E-103 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 251 289 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 SUPERFAMILY SSF53383 7 450 5.01E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 Gene3D G3DSA:3.90.1150.10 14 447 9.6E-150 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_010400 96a767bd7fd33f872ad101ff7e1dd676 452 Gene3D G3DSA:3.40.640.10 66 341 9.6E-150 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_008710 75e5efb90f2a2edae6e663ea4ee72a20 150 SMART SM00860 8 143 1.5E-7 T 11-10-2018 IPR018958 Knr4/Smi1-like domain ABE28_008710 75e5efb90f2a2edae6e663ea4ee72a20 150 SUPERFAMILY SSF160631 6 144 3.01E-20 T 11-10-2018 ABE28_008710 75e5efb90f2a2edae6e663ea4ee72a20 150 Gene3D G3DSA:3.40.1580.10 2 147 1.0E-21 T 11-10-2018 IPR037883 Knr4/Smi1-like domain superfamily ABE28_008710 75e5efb90f2a2edae6e663ea4ee72a20 150 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 8 142 4.0E-16 T 11-10-2018 IPR018958 Knr4/Smi1-like domain ABE28_019875 4d5e3431b96309810122febcf9398e5b 265 Gene3D G3DSA:3.30.750.24 147 262 1.0E-31 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_019875 4d5e3431b96309810122febcf9398e5b 265 SUPERFAMILY SSF52091 154 259 1.79E-10 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_019980 b57628f8fcbbbb7c7eaced7dc3fd00bd 310 Pfam PF00005 ABC transporter 21 163 1.9E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_019980 b57628f8fcbbbb7c7eaced7dc3fd00bd 310 SMART SM00382 30 254 3.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019980 b57628f8fcbbbb7c7eaced7dc3fd00bd 310 Gene3D G3DSA:3.40.50.300 1 238 3.3E-57 T 11-10-2018 ABE28_019980 b57628f8fcbbbb7c7eaced7dc3fd00bd 310 SUPERFAMILY SSF52540 3 216 2.02E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_019980 b57628f8fcbbbb7c7eaced7dc3fd00bd 310 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022925 659ad962588ea029eefb07033330f219 284 Gene3D G3DSA:3.40.50.150 84 283 3.4E-52 T 11-10-2018 ABE28_022925 659ad962588ea029eefb07033330f219 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 283 38.429 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ABE28_022925 659ad962588ea029eefb07033330f219 284 Gene3D G3DSA:1.10.8.10 2 83 1.2E-18 T 11-10-2018 ABE28_022925 659ad962588ea029eefb07033330f219 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 279 1.2E-77 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 ABE28_022925 659ad962588ea029eefb07033330f219 284 Pfam PF05175 Methyltransferase small domain 114 192 1.0E-11 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 ABE28_022925 659ad962588ea029eefb07033330f219 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 186 192 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 ABE28_022925 659ad962588ea029eefb07033330f219 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 282 2.2E-70 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 ABE28_022925 659ad962588ea029eefb07033330f219 284 SUPERFAMILY SSF53335 3 270 1.15E-41 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 ProSitePatterns PS00449 ATP synthase a subunit signature. 167 176 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 PRINTS PR00123 ATP synthase A subunit signature 164 186 4.5E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 PRINTS PR00123 ATP synthase A subunit signature 80 96 4.5E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 PRINTS PR00123 ATP synthase A subunit signature 148 163 4.5E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 PRINTS PR00123 ATP synthase A subunit signature 217 232 4.5E-19 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 Hamap MF_01393 ATP synthase subunit a [atpB]. 15 237 13.811 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 16 233 3.2E-48 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 Pfam PF00119 ATP synthase A chain 22 231 6.5E-57 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 Gene3D G3DSA:1.20.120.220 73 238 7.8E-41 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022860 2d2cda9830b723794b138f6546be4d41 238 SUPERFAMILY SSF81336 74 231 5.89E-40 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_007035 0f496b754604429f4938ae0ff8156d60 120 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 120 16.614 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABE28_007035 0f496b754604429f4938ae0ff8156d60 120 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 115 9.8E-23 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABE28_007035 0f496b754604429f4938ae0ff8156d60 120 TIGRFAM TIGR00494 crcB: protein CrcB 5 118 4.8E-31 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABE28_018370 8acb9442602f1892a487c3cf997f00d6 208 Gene3D G3DSA:1.10.357.10 7 200 1.6E-45 T 11-10-2018 ABE28_018370 8acb9442602f1892a487c3cf997f00d6 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 65 3.5E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018370 8acb9442602f1892a487c3cf997f00d6 208 Pfam PF14278 Transcriptional regulator C-terminal region 96 169 3.9E-12 T 11-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type ABE28_018370 8acb9442602f1892a487c3cf997f00d6 208 SUPERFAMILY SSF46689 9 73 1.13E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_001645 762ec60dbf631d0ad88b564b544b1d90 428 SUPERFAMILY SSF142764 3 424 1.03E-85 T 11-10-2018 ABE28_001645 762ec60dbf631d0ad88b564b544b1d90 428 Gene3D G3DSA:3.40.50.10840 2 229 4.3E-62 T 11-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily ABE28_001645 762ec60dbf631d0ad88b564b544b1d90 428 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 245 416 1.4E-29 T 11-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain ABE28_001645 762ec60dbf631d0ad88b564b544b1d90 428 Gene3D G3DSA:3.40.980.20 230 426 4.2E-13 T 11-10-2018 ABE28_001645 762ec60dbf631d0ad88b564b544b1d90 428 Pfam PF07005 Putative sugar-binding N-terminal domain 3 228 2.4E-54 T 11-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain ABE28_018320 5104aa7ab2d5ad19d1e3b31a141a1274 222 Gene3D G3DSA:2.60.120.10 23 180 1.7E-35 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_018320 5104aa7ab2d5ad19d1e3b31a141a1274 222 Pfam PF00190 Cupin 41 164 4.4E-14 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 ABE28_018320 5104aa7ab2d5ad19d1e3b31a141a1274 222 SMART SM00835 20 166 2.5E-26 T 11-10-2018 IPR006045 Cupin 1 GO:0045735 ABE28_018320 5104aa7ab2d5ad19d1e3b31a141a1274 222 SUPERFAMILY SSF51182 39 182 9.41E-28 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 3.2E-15 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 3.4E-21 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 1.0E-7 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 Gene3D G3DSA:1.20.5.1150 16 56 1.1E-17 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.466 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_015470 ed933f2174a72e270b309daca64b0bdc 57 Pfam PF01165 Ribosomal protein S21 5 57 6.8E-21 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 PIRSF PIRSF000292 1 308 3.6E-99 T 11-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 10 236 1.6E-83 T 11-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 Gene3D G3DSA:1.10.287.90 25 110 3.0E-26 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 SUPERFAMILY SSF81464 15 111 2.29E-21 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 42 107 6.3E-8 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 Gene3D G3DSA:2.60.40.420 111 267 1.1E-37 T 11-10-2018 IPR008972 Cupredoxin ABE28_002330 bf8fb7927077cb36d89edd43a51f2d98 308 SUPERFAMILY SSF49503 123 268 6.54E-39 T 11-10-2018 IPR008972 Cupredoxin ABE28_023495 da8f01426e7e4d2ed4fcf8c705ab9d74 318 SUPERFAMILY SSF49265 235 315 8.29E-7 T 11-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 ABE28_023495 da8f01426e7e4d2ed4fcf8c705ab9d74 318 Pfam PF04203 Sortase family 85 223 2.0E-21 T 11-10-2018 IPR005754 Sortase family ABE28_023495 da8f01426e7e4d2ed4fcf8c705ab9d74 318 Gene3D G3DSA:2.40.260.10 22 236 5.2E-34 T 11-10-2018 IPR023365 Sortase domain superfamily ABE28_023495 da8f01426e7e4d2ed4fcf8c705ab9d74 318 SUPERFAMILY SSF63817 81 224 1.44E-19 T 11-10-2018 IPR023365 Sortase domain superfamily ABE28_023495 da8f01426e7e4d2ed4fcf8c705ab9d74 318 Gene3D G3DSA:2.60.40.10 237 318 6.6E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_008270 86bee6d5a22ae1a6060de08ff0f3fba3 363 Gene3D G3DSA:3.40.50.2300 150 348 1.0E-107 T 11-10-2018 ABE28_008270 86bee6d5a22ae1a6060de08ff0f3fba3 363 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 44 354 1.7E-86 T 11-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 ABE28_008270 86bee6d5a22ae1a6060de08ff0f3fba3 363 Gene3D G3DSA:3.40.50.2300 46 316 1.0E-107 T 11-10-2018 ABE28_023115 e167f6d9d76fcb5b98df4cec9962e329 175 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 82 163 2.2E-43 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_023115 e167f6d9d76fcb5b98df4cec9962e329 175 PIRSF PIRSF038931 3 175 3.7E-55 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_023115 e167f6d9d76fcb5b98df4cec9962e329 175 SUPERFAMILY SSF81995 6 84 1.49E-5 T 11-10-2018 ABE28_023115 e167f6d9d76fcb5b98df4cec9962e329 175 Pfam PF09671 Spore coat protein (Spore_GerQ) 84 159 1.3E-41 T 11-10-2018 IPR014099 Spore coat protein GerQ ABE28_013090 b66068c4553e4339aa1c8f76fa470309 247 SUPERFAMILY SSF55797 124 244 4.84E-28 T 11-10-2018 IPR035940 CAP superfamily ABE28_013090 b66068c4553e4339aa1c8f76fa470309 247 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 124 246 7.8E-63 T 11-10-2018 IPR014258 CAP domain, YkwD-like ABE28_013090 b66068c4553e4339aa1c8f76fa470309 247 Pfam PF00188 Cysteine-rich secretory protein family 132 244 2.1E-23 T 11-10-2018 IPR014044 CAP domain ABE28_013090 b66068c4553e4339aa1c8f76fa470309 247 Gene3D G3DSA:3.40.33.10 4 245 8.9E-68 T 11-10-2018 IPR035940 CAP superfamily ABE28_009565 eacb1eeccc6374bbfdb954ab4b619836 230 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_009565 eacb1eeccc6374bbfdb954ab4b619836 230 Gene3D G3DSA:3.40.50.300 1 230 1.8E-64 T 11-10-2018 ABE28_009565 eacb1eeccc6374bbfdb954ab4b619836 230 Pfam PF00005 ABC transporter 24 170 5.5E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_009565 eacb1eeccc6374bbfdb954ab4b619836 230 SMART SM00382 33 219 5.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_009565 eacb1eeccc6374bbfdb954ab4b619836 230 SUPERFAMILY SSF52540 3 221 6.05E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018785 88479b27482816b8891bc8f1993755d5 618 Pfam PF04740 LXG domain of WXG superfamily 6 199 1.2E-39 T 11-10-2018 IPR006829 LXG domain ABE28_022420 c65a1c0553b535de9d09325ba7b8b849 119 Gene3D G3DSA:3.30.160.170 19 115 5.5E-32 T 11-10-2018 IPR035924 FlaG-like superfamily ABE28_022420 c65a1c0553b535de9d09325ba7b8b849 119 SUPERFAMILY SSF160214 34 119 2.88E-27 T 11-10-2018 IPR035924 FlaG-like superfamily ABE28_022420 c65a1c0553b535de9d09325ba7b8b849 119 Pfam PF03646 FlaG protein 30 117 3.5E-27 T 11-10-2018 IPR005186 FlaG protein ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 Pfam PF01047 MarR family 36 93 2.6E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 SUPERFAMILY SSF46785 34 146 1.21E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 Gene3D G3DSA:1.10.10.10 1 143 1.4E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 SMART SM00347 29 129 1.4E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 53 69 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_001090 96e217aecd4d94cf3f8c214d226a741c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 2.3E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_024050 f3d85b855ea0ce71769d60d4dd38a0c0 441 Pfam PF05139 Erythromycin esterase 89 434 1.7E-30 T 11-10-2018 IPR007815 Erythromycin esterase GO:0046677 ABE28_024050 f3d85b855ea0ce71769d60d4dd38a0c0 441 SUPERFAMILY SSF159501 29 439 2.01E-61 T 11-10-2018 ABE28_024050 f3d85b855ea0ce71769d60d4dd38a0c0 441 Gene3D G3DSA:1.20.1440.30 164 297 4.5E-42 T 11-10-2018 ABE28_024050 f3d85b855ea0ce71769d60d4dd38a0c0 441 Gene3D G3DSA:3.30.1870.10 91 163 4.5E-42 T 11-10-2018 ABE28_024050 f3d85b855ea0ce71769d60d4dd38a0c0 441 Gene3D G3DSA:3.40.1660.10 47 434 4.5E-42 T 11-10-2018 ABE28_010280 39f79cec51b84230c9212d9f0bf823f9 78 Pfam PF01527 Transposase 1 58 6.6E-11 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ABE28_010280 39f79cec51b84230c9212d9f0bf823f9 78 Gene3D G3DSA:1.10.10.60 1 73 1.1E-5 T 11-10-2018 ABE28_010280 39f79cec51b84230c9212d9f0bf823f9 78 SUPERFAMILY SSF46689 2 75 9.56E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_015960 39f79cec51b84230c9212d9f0bf823f9 78 Pfam PF01527 Transposase 1 58 6.6E-11 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 ABE28_015960 39f79cec51b84230c9212d9f0bf823f9 78 Gene3D G3DSA:1.10.10.60 1 73 1.1E-5 T 11-10-2018 ABE28_015960 39f79cec51b84230c9212d9f0bf823f9 78 SUPERFAMILY SSF46689 2 75 9.56E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_015740 3d554768b8a448eba77a6cfb262bf20d 89 PIRSF PIRSF037258 1 88 1.7E-45 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 ABE28_015740 3d554768b8a448eba77a6cfb262bf20d 89 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 4.0E-37 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 ABE28_015740 3d554768b8a448eba77a6cfb262bf20d 89 Hamap MF_01507 UPF0297 protein . 1 85 28.507 T 11-10-2018 IPR009309 Uncharacterised protein family UPF0297 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 63 401 1.3E-119 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 SUPERFAMILY SSF55021 327 404 1.24E-22 T 11-10-2018 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 SUPERFAMILY SSF55021 248 324 1.22E-13 T 11-10-2018 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 Gene3D G3DSA:3.30.70.260 260 337 4.3E-48 T 11-10-2018 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 Pfam PF13840 ACT domain 335 398 9.2E-15 T 11-10-2018 IPR027795 CASTOR, ACT domain ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 Gene3D G3DSA:3.40.1160.10 1 253 2.5E-89 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 PIRSF PIRSF000726 57 408 1.0E-133 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 PIRSF PIRSF000726 1 60 6.2E-21 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 401 2.3E-147 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 Gene3D G3DSA:3.30.70.260 254 402 4.3E-48 T 11-10-2018 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 SUPERFAMILY SSF53633 3 242 1.57E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 Pfam PF00696 Amino acid kinase family 3 229 1.4E-50 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 ABE28_016680 92baa5f6a672b759250756b01e6c14b8 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 SUPERFAMILY SSF51735 5 250 3.33E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 249 1.6E-70 T 11-10-2018 ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 4.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 4.5E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 Gene3D G3DSA:3.40.50.720 1 250 1.8E-88 T 11-10-2018 ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_009600 f2e48857e535ecfde9b7adefa609e472 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.1E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012060 e61cb1f9e459db56f2b94cdb4d3aa065 253 SUPERFAMILY SSF53800 1 242 2.62E-49 T 11-10-2018 ABE28_012060 e61cb1f9e459db56f2b94cdb4d3aa065 253 Pfam PF01903 CbiX 134 237 2.7E-20 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 ABE28_012060 e61cb1f9e459db56f2b94cdb4d3aa065 253 Pfam PF01903 CbiX 9 113 2.7E-26 T 11-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 ABE28_012060 e61cb1f9e459db56f2b94cdb4d3aa065 253 Gene3D G3DSA:3.40.50.1400 124 244 3.7E-22 T 11-10-2018 ABE28_012060 e61cb1f9e459db56f2b94cdb4d3aa065 253 Gene3D G3DSA:3.40.50.1400 1 123 6.6E-25 T 11-10-2018 ABE28_002940 94734ab0c051148a66dc17eb029e8bd3 136 Pfam PF06146 Phosphate-starvation-inducible E 54 119 1.7E-13 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like ABE28_002940 94734ab0c051148a66dc17eb029e8bd3 136 PIRSF PIRSF029598 3 133 1.1E-30 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 ABE28_001885 1465b304818217c705983079c885407e 162 Pfam PF00731 AIR carboxylase 4 152 5.6E-65 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABE28_001885 1465b304818217c705983079c885407e 162 SMART SM01001 3 154 1.6E-104 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABE28_001885 1465b304818217c705983079c885407e 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.551 T 11-10-2018 IPR033747 Class I PurE ABE28_001885 1465b304818217c705983079c885407e 162 Gene3D G3DSA:3.40.50.7700 1 162 7.7E-73 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABE28_001885 1465b304818217c705983079c885407e 162 PIRSF PIRSF001338 1 162 9.9E-70 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 ABE28_001885 1465b304818217c705983079c885407e 162 SUPERFAMILY SSF52255 4 161 2.75E-68 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 ABE28_001885 1465b304818217c705983079c885407e 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 5 161 1.5E-67 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 ABE28_021485 f730cd4d0e8988f9d4b3fdc92c45aabe 158 PIRSF PIRSF019239 1 158 3.2E-47 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ABE28_021485 f730cd4d0e8988f9d4b3fdc92c45aabe 158 Pfam PF01899 Na+/H+ ion antiporter subunit 9 156 2.6E-44 T 11-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 ABE28_013395 bf0c4eaa36b7fd2374d465efe491c6bd 205 Pfam PF14005 YpjP-like protein 67 198 5.1E-57 T 11-10-2018 IPR025616 YpjP-like protein ABE28_002320 be08466d7bf158a6a92625af9da4e6f2 198 Pfam PF00510 Cytochrome c oxidase subunit III 21 196 3.5E-14 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002320 be08466d7bf158a6a92625af9da4e6f2 198 SUPERFAMILY SSF81452 17 196 2.22E-48 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_002320 be08466d7bf158a6a92625af9da4e6f2 198 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 10 198 2.2E-75 T 11-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 ABE28_002320 be08466d7bf158a6a92625af9da4e6f2 198 Gene3D G3DSA:1.20.120.80 13 198 1.4E-48 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 Pfam PF07690 Major Facilitator Superfamily 11 347 2.6E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 SUPERFAMILY SSF103473 10 372 7.46E-29 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 Gene3D G3DSA:1.20.1250.20 6 375 1.8E-23 T 11-10-2018 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 133 154 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 286 309 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 210 232 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 247 264 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 160 177 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 94 112 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 45 63 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 71 89 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 349 372 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019135 e7eccabb5464b3d13d6a4e059d294ae0 390 PRINTS PR01988 Putative bacilysin exporter bacE signature 10 32 4.1E-104 T 11-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 248 4.3E-28 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 276 1.2E-47 T 11-10-2018 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 276 8.5E-49 T 11-10-2018 IPR000150 Cof family GO:0016787 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 ProSitePatterns PS01229 Hypothetical cof family signature 2. 229 251 - T 11-10-2018 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 SUPERFAMILY SSF56784 1 280 1.89E-53 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 Gene3D G3DSA:3.30.1240.10 82 204 2.3E-54 T 11-10-2018 ABE28_019260 0e5e71ea3585b3b74c2cfc420f9f53ce 281 Gene3D G3DSA:3.40.50.1000 6 271 2.3E-54 T 11-10-2018 IPR023214 HAD superfamily ABE28_002650 f1e6bad45e5614b99b81cca0445ec7fc 408 Pfam PF00999 Sodium/hydrogen exchanger family 12 377 3.2E-61 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 ABE28_002650 f1e6bad45e5614b99b81cca0445ec7fc 408 Gene3D G3DSA:1.20.1530.20 2 385 4.0E-65 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ABE28_015540 ab4a57111c9619374c49df279e1719d7 399 SUPERFAMILY SSF53187 260 382 2.67E-8 T 11-10-2018 ABE28_015540 ab4a57111c9619374c49df279e1719d7 399 Gene3D G3DSA:3.40.630.40 214 391 1.9E-5 T 11-10-2018 ABE28_015540 ab4a57111c9619374c49df279e1719d7 399 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 380 9.8E-76 T 11-10-2018 IPR010897 Sporulation stage II, protein P ABE28_015540 ab4a57111c9619374c49df279e1719d7 399 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 181 384 3.4E-73 T 11-10-2018 IPR010897 Sporulation stage II, protein P ABE28_024120 78fae8701199f2957de7d5609a291a78 193 Gene3D G3DSA:1.10.357.10 68 193 1.1E-18 T 11-10-2018 ABE28_024120 78fae8701199f2957de7d5609a291a78 193 SUPERFAMILY SSF48498 79 192 6.85E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_024120 78fae8701199f2957de7d5609a291a78 193 SUPERFAMILY SSF46689 2 80 7.18E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_024120 78fae8701199f2957de7d5609a291a78 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 54 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_024120 78fae8701199f2957de7d5609a291a78 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 9.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_024120 78fae8701199f2957de7d5609a291a78 193 Gene3D G3DSA:1.10.10.60 1 65 5.5E-26 T 11-10-2018 ABE28_003585 74c9afa543c5dca6e4f020c6a786ea09 59 ProDom PD053407 YFHD 1 44 5.0E-11 T 11-10-2018 ABE28_003585 74c9afa543c5dca6e4f020c6a786ea09 59 Pfam PF14151 YfhD-like protein 1 59 1.8E-29 T 11-10-2018 IPR025435 YfhD-like protein ABE28_004475 6116f3b03d1ac752d9d8aee7e2f3b712 137 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 16 129 4.1E-7 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_004475 6116f3b03d1ac752d9d8aee7e2f3b712 137 Gene3D G3DSA:3.10.180.10 4 137 1.6E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_004475 6116f3b03d1ac752d9d8aee7e2f3b712 137 SUPERFAMILY SSF54593 6 134 1.75E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_021155 17d97386c9888f6b05afbabe6461b21f 124 Gene3D G3DSA:3.40.1440.10 36 122 3.2E-14 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_021155 17d97386c9888f6b05afbabe6461b21f 124 Pfam PF01541 GIY-YIG catalytic domain 44 117 4.5E-8 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_021155 17d97386c9888f6b05afbabe6461b21f 124 PIRSF PIRSF026568 1 124 4.1E-60 T 11-10-2018 IPR014527 Excinuclease GIY-YIG catalytic domain-containing uncharacterised conserved protein ABE28_021155 17d97386c9888f6b05afbabe6461b21f 124 SMART SM00465 43 122 5.4E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease ABE28_021155 17d97386c9888f6b05afbabe6461b21f 124 SUPERFAMILY SSF82771 43 120 3.14E-13 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 ABE28_005775 aff5dd73faf012694d56c04f05de1f38 153 Gene3D G3DSA:1.20.144.10 65 153 4.6E-19 T 11-10-2018 ABE28_005775 aff5dd73faf012694d56c04f05de1f38 153 Gene3D G3DSA:1.20.144.10 1 64 1.2E-6 T 11-10-2018 ABE28_005775 aff5dd73faf012694d56c04f05de1f38 153 SMART SM00014 34 145 3.3E-23 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_005775 aff5dd73faf012694d56c04f05de1f38 153 SUPERFAMILY SSF48317 10 149 2.09E-25 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_005775 aff5dd73faf012694d56c04f05de1f38 153 Pfam PF01569 PAP2 superfamily 36 148 2.2E-16 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_003330 cfe06f5e7554496b4424469743e60471 59 Gene3D G3DSA:3.40.50.720 7 58 2.4E-8 T 11-10-2018 ABE28_003330 cfe06f5e7554496b4424469743e60471 59 SUPERFAMILY SSF51735 13 55 2.89E-7 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 Pfam PF01565 FAD binding domain 39 176 5.6E-42 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 SUPERFAMILY SSF56176 2 213 1.26E-67 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 Pfam PF02913 FAD linked oxidases, C-terminal domain 212 452 9.8E-57 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 Gene3D G3DSA:3.30.465.40 1 232 5.8E-73 T 11-10-2018 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 Gene3D G3DSA:3.30.70.2740 332 413 4.4E-11 T 11-10-2018 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 SUPERFAMILY SSF55103 217 454 3.27E-60 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABE28_004785 e421bb47f42fa6b8daefee5712fa85d5 455 Gene3D G3DSA:1.10.45.10 414 453 4.6E-9 T 11-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 ABE28_003955 faf4904c3a496dc3b5100ce9a3f81ce8 384 Gene3D G3DSA:3.30.300.210 219 372 1.5E-30 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_003955 faf4904c3a496dc3b5100ce9a3f81ce8 384 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 205 368 5.1E-33 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_003955 faf4904c3a496dc3b5100ce9a3f81ce8 384 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 370 1.8E-81 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 3 248 1.7E-64 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 SUPERFAMILY SSF75217 72 248 5.52E-57 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 Gene3D G3DSA:3.40.1280.10 1 250 2.9E-90 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 Pfam PF04452 RNA methyltransferase 16 244 1.9E-74 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 SUPERFAMILY SSF88697 2 68 2.06E-13 T 11-10-2018 IPR015947 PUA-like superfamily ABE28_015495 50f51b7d89f69430c032ac5ba36f034f 250 PIRSF PIRSF015601 1 248 5.5E-65 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 ABE28_004960 44f89eed06a7b815360320ef7c60a3cc 183 Pfam PF02417 Chromate transporter 10 175 5.3E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ABE28_018940 795fecb80369d882a60035285b8cb0d5 316 Pfam PF01136 Peptidase family U32 131 221 9.9E-7 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABE28_019020 fcbd296f6cbc96fb6f7902823258f27e 92 Pfam PF04542 Sigma-70 region 2 22 76 2.1E-6 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_019020 fcbd296f6cbc96fb6f7902823258f27e 92 SUPERFAMILY SSF88946 3 81 3.73E-10 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 ABE28_019020 fcbd296f6cbc96fb6f7902823258f27e 92 Gene3D G3DSA:1.10.1740.10 1 92 3.0E-9 T 11-10-2018 ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 Pfam PF10150 Ribonuclease E/G family 122 385 1.1E-74 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 SUPERFAMILY SSF50249 38 115 7.64E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 SMART SM00316 36 116 1.8E-5 T 11-10-2018 IPR022967 RNA-binding domain, S1 ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 Pfam PF00575 S1 RNA binding domain 37 91 1.1E-4 T 11-10-2018 IPR003029 S1 domain GO:0003676 ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 Gene3D G3DSA:2.40.50.140 30 121 8.5E-25 T 11-10-2018 ABE28_016345 24761fb2226da67d455303ac5a2022d1 490 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 418 1.8E-111 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 ABE28_004845 c8e92f22bf9f1642471176b92f3f8fb5 156 Gene3D G3DSA:3.40.30.10 48 151 1.6E-15 T 11-10-2018 ABE28_004845 c8e92f22bf9f1642471176b92f3f8fb5 156 SUPERFAMILY SSF52833 46 151 1.4E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_004845 c8e92f22bf9f1642471176b92f3f8fb5 156 Pfam PF00085 Thioredoxin 60 151 1.8E-8 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 ABE28_012265 95e824f887ce91744b59b144f081b64c 263 SUPERFAMILY SSF54060 119 257 3.3E-39 T 11-10-2018 ABE28_012265 95e824f887ce91744b59b144f081b64c 263 Pfam PF04231 Endonuclease I 58 257 5.7E-34 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 ABE28_010035 0cf78b7f3181a087d581397e0790ef46 153 PIRSF PIRSF021441 1 152 9.3E-63 T 11-10-2018 IPR031306 CcdC protein ABE28_010035 0cf78b7f3181a087d581397e0790ef46 153 Pfam PF07301 Protein of unknown function (DUF1453) 4 147 1.4E-56 T 11-10-2018 IPR009916 Protein of unknown function DUF1453 ABE28_015840 b2039baff71d0a8c6843719792d03815 309 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 85 226 1.0E-50 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_015840 b2039baff71d0a8c6843719792d03815 309 Gene3D G3DSA:1.10.260.150 50 309 3.2E-93 T 11-10-2018 ABE28_015840 b2039baff71d0a8c6843719792d03815 309 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 10 308 49.822 T 11-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU ABE28_015840 b2039baff71d0a8c6843719792d03815 309 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 84 227 1.1E-51 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_013720 37afec3b3b01859eee00836126691c49 393 PIRSF PIRSF005962 2 392 3.8E-125 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_013720 37afec3b3b01859eee00836126691c49 393 SUPERFAMILY SSF53187 4 391 1.71E-76 T 11-10-2018 ABE28_013720 37afec3b3b01859eee00836126691c49 393 SUPERFAMILY SSF55031 184 302 1.03E-30 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_013720 37afec3b3b01859eee00836126691c49 393 Pfam PF01546 Peptidase family M20/M25/M40 75 387 1.2E-27 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_013720 37afec3b3b01859eee00836126691c49 393 Gene3D G3DSA:3.30.70.360 184 298 9.5E-131 T 11-10-2018 ABE28_013720 37afec3b3b01859eee00836126691c49 393 Gene3D G3DSA:3.40.630.10 13 376 9.5E-131 T 11-10-2018 ABE28_013720 37afec3b3b01859eee00836126691c49 393 Pfam PF07687 Peptidase dimerisation domain 188 284 5.8E-11 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_013720 37afec3b3b01859eee00836126691c49 393 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 14 378 4.9E-112 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_010285 173bddcf69fd03e9696045b85df6b4df 403 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 165 174 - T 11-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 ABE28_010285 173bddcf69fd03e9696045b85df6b4df 403 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 42 350 2.0E-25 T 11-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 ABE28_010285 173bddcf69fd03e9696045b85df6b4df 403 Gene3D G3DSA:3.20.20.80 21 367 5.8E-52 T 11-10-2018 ABE28_010285 173bddcf69fd03e9696045b85df6b4df 403 SUPERFAMILY SSF51445 27 371 7.97E-49 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 252 272 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 128 141 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 199 227 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 177 192 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 310 326 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PRINTS PR00143 Citrate synthase signature 330 344 3.1E-35 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 1.9E-110 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 SUPERFAMILY SSF48256 6 368 1.83E-120 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 Gene3D G3DSA:1.10.580.10 32 357 3.6E-109 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 PIRSF PIRSF001369 1 375 2.2E-136 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 Gene3D G3DSA:1.10.230.10 225 324 3.6E-109 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain ABE28_000945 7e7a0bf0c806ae9ebd7def71a74ea191 375 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 ABE28_015375 4b2561e7656798f9b5c4e0e6309040b1 151 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 5 148 29.136 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 ABE28_015375 4b2561e7656798f9b5c4e0e6309040b1 151 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 20 146 6.6E-41 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 ABE28_009715 b0c2395ff19e71163cdf009e694cb03f 555 PIRSF PIRSF006060 13 548 6.8E-18 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_009715 b0c2395ff19e71163cdf009e694cb03f 555 Gene3D G3DSA:1.20.1740.10 31 538 4.5E-6 T 11-10-2018 ABE28_009715 b0c2395ff19e71163cdf009e694cb03f 555 Pfam PF13520 Amino acid permease 44 506 6.6E-23 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_003445 16e43cafe92b57774a7260c3a22c8aea 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 39 242 1.9E-44 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain ABE28_003445 16e43cafe92b57774a7260c3a22c8aea 246 Gene3D G3DSA:3.10.200.10 31 246 3.1E-66 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily ABE28_003445 16e43cafe92b57774a7260c3a22c8aea 246 SUPERFAMILY SSF51069 39 244 3.14E-61 T 11-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily ABE28_003445 16e43cafe92b57774a7260c3a22c8aea 246 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 116 132 - T 11-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 ABE28_003445 16e43cafe92b57774a7260c3a22c8aea 246 SMART SM01057 37 245 1.9E-77 T 11-10-2018 IPR001148 Alpha carbonic anhydrase domain ABE28_014245 5b1b4f42297b58c301918990de812bed 120 PIRSF PIRSF005965 1 120 1.1E-45 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_014245 5b1b4f42297b58c301918990de812bed 120 Gene3D G3DSA:3.30.1330.40 1 120 1.7E-46 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABE28_014245 5b1b4f42297b58c301918990de812bed 120 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 8 119 4.0E-31 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_014245 5b1b4f42297b58c301918990de812bed 120 Pfam PF07736 Chorismate mutase type I 2 118 2.5E-44 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_014245 5b1b4f42297b58c301918990de812bed 120 SUPERFAMILY SSF55298 2 118 2.35E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 ABE28_014245 5b1b4f42297b58c301918990de812bed 120 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 118 1.6E-43 T 11-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PIRSF PIRSF016599 2 487 8.8E-179 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 Gene3D G3DSA:3.40.630.10 368 486 8.4E-19 T 11-10-2018 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 Pfam PF01546 Peptidase family M20/M25/M40 74 480 2.3E-16 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 SUPERFAMILY SSF53187 13 484 3.71E-52 T 11-10-2018 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 10 484 4.7E-173 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 Pfam PF07687 Peptidase dimerisation domain 208 292 6.1E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 102 120 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 430 446 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 365 383 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 136 153 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 81 100 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 207 224 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 160 178 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 252 271 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 PRINTS PR00934 X-His dipeptidase (M25) signature 452 474 1.7E-51 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 ABE28_020130 1e2004b8e9106d6172bb58c78886aadd 487 Gene3D G3DSA:3.40.630.10 2 235 9.8E-56 T 11-10-2018 ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 Gene3D G3DSA:3.30.390.10 8 115 5.2E-103 T 11-10-2018 IPR029017 Enolase-like, N-terminal ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 SMART SM00922 140 238 1.8E-25 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 Gene3D G3DSA:3.20.20.120 116 349 5.2E-103 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 6 124 1.1E-13 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 Pfam PF13378 Enolase C-terminal domain-like 143 349 1.0E-46 T 11-10-2018 IPR029065 Enolase C-terminal domain-like ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 SUPERFAMILY SSF51604 116 349 1.57E-62 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily ABE28_001600 fb4554a2dc17b36c0ce37a457285864e 351 SUPERFAMILY SSF54826 3 124 2.95E-23 T 11-10-2018 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 4.3E-24 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 PRINTS PR00072 Malic enzyme signature 77 99 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 PRINTS PR00072 Malic enzyme signature 156 172 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 PRINTS PR00072 Malic enzyme signature 187 203 1.0E-8 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 SUPERFAMILY SSF53223 6 158 4.6E-58 T 11-10-2018 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 SMART SM00919 160 384 3.1E-132 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 PIRSF PIRSF000106 41 410 9.6E-86 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 Gene3D G3DSA:3.40.50.720 158 412 1.8E-87 T 11-10-2018 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 SMART SM01274 15 148 2.8E-86 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 Pfam PF00390 Malic enzyme, N-terminal domain 15 148 2.3E-30 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 Gene3D G3DSA:3.40.50.10380 1 157 1.8E-75 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 ABE28_017015 ff831361a0f0d7814a80efde7930879c 413 SUPERFAMILY SSF51735 160 405 6.88E-83 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_019195 9aff5c53d015550ecf3c6bd3e69fc3d3 446 SUPERFAMILY SSF75304 3 432 2.62E-125 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_019195 9aff5c53d015550ecf3c6bd3e69fc3d3 446 Pfam PF01425 Amidase 13 422 1.0E-106 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_019195 9aff5c53d015550ecf3c6bd3e69fc3d3 446 ProSitePatterns PS00571 Amidases signature. 140 171 - T 11-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 ABE28_019195 9aff5c53d015550ecf3c6bd3e69fc3d3 446 Gene3D G3DSA:3.90.1300.10 1 433 4.0E-130 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 ABE28_015865 15db9bb05e9b028254a0879d20bcc75c 468 Pfam PF01943 Polysaccharide biosynthesis protein 7 282 3.2E-20 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_015865 15db9bb05e9b028254a0879d20bcc75c 468 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 346 461 6.7E-7 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_006060 9aa44622b1b916c72e7cf7dc7b24b122 315 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 104 309 1.5E-70 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_006060 9aa44622b1b916c72e7cf7dc7b24b122 315 Gene3D G3DSA:3.90.850.10 99 314 2.1E-84 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_006060 9aa44622b1b916c72e7cf7dc7b24b122 315 SUPERFAMILY SSF56529 91 310 6.28E-81 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_015940 6e36ff540d6d6eb85c38446a4b8d1f9f 306 SUPERFAMILY SSF51126 3 240 6.28E-10 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 182 205 4.6 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 89 112 7.3 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 159 180 5.2 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 228 251 6.5 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 20 42 340.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 113 136 0.5 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 43 65 50.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 66 88 21.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00369 207 227 35.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 159 178 1.2 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 205 224 16.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 182 201 130.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 228 247 92.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 138 155 98.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 113 132 110.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SMART SM00364 43 62 130.0 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Gene3D G3DSA:3.80.10.10 1 93 6.8E-22 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 SUPERFAMILY SSF52058 3 271 5.1E-56 T 11-10-2018 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Pfam PF12799 Leucine Rich repeats (2 copies) 161 199 1.5E-6 T 11-10-2018 IPR025875 Leucine rich repeat 4 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Gene3D G3DSA:3.80.10.10 94 282 1.8E-45 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Pfam PF13855 Leucine rich repeat 207 263 1.1E-8 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Pfam PF13855 Leucine rich repeat 23 79 2.2E-9 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 ABE28_019570 685a0b9dbd761113a3a8b2bcd93435e9 283 Pfam PF13855 Leucine rich repeat 95 149 4.2E-8 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 ABE28_004590 66bb5c691d892c1503a100d8a344749f 631 PIRSF PIRSF000549 1 631 7.3E-260 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 ABE28_004590 66bb5c691d892c1503a100d8a344749f 631 SMART SM00763 21 371 6.3E-192 T 11-10-2018 IPR013153 PrkA AAA domain ABE28_004590 66bb5c691d892c1503a100d8a344749f 631 SUPERFAMILY SSF52540 68 458 4.0E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004590 66bb5c691d892c1503a100d8a344749f 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 5.7E-93 T 11-10-2018 IPR010650 PrkA C-terminal domain ABE28_004590 66bb5c691d892c1503a100d8a344749f 631 Pfam PF08298 PrkA AAA domain 22 370 2.9E-147 T 11-10-2018 IPR013153 PrkA AAA domain ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 Gene3D G3DSA:3.40.640.10 58 294 1.0E-138 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 Pfam PF00155 Aminotransferase class I and II 43 383 1.2E-63 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 SUPERFAMILY SSF53383 7 394 5.57E-110 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 Gene3D G3DSA:3.90.1150.10 38 387 1.0E-138 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_003055 d37da73b1dc36b19d3a645f80d43b80b 396 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 10 396 2.9E-191 T 11-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 SMART SM00382 30 218 5.9E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 SUPERFAMILY SSF52540 1 240 4.76E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 Gene3D G3DSA:3.40.50.300 1 232 4.3E-75 T 11-10-2018 ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 Pfam PF09383 NIL domain 260 332 6.2E-19 T 11-10-2018 IPR018449 NIL domain ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 Gene3D G3DSA:3.30.70.260 233 336 8.8E-26 T 11-10-2018 ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 SMART SM00930 258 333 2.0E-23 T 11-10-2018 IPR018449 NIL domain ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 Pfam PF00005 ABC transporter 21 169 6.8E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_005555 bd5e1f0845e4bf37bb2f581f3843ab89 338 SUPERFAMILY SSF55021 248 336 1.49E-20 T 11-10-2018 ABE28_004805 dc13041baa40bfb3a2b277157884ab21 332 Pfam PF01384 Phosphate transporter family 22 321 2.5E-91 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ABE28_012505 26c28f5b36315c5c0dfa93ba46986f69 206 SUPERFAMILY SSF51569 3 204 1.21E-62 T 11-10-2018 ABE28_012505 26c28f5b36315c5c0dfa93ba46986f69 206 Gene3D G3DSA:3.20.20.70 1 206 1.3E-72 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_012505 26c28f5b36315c5c0dfa93ba46986f69 206 Pfam PF01081 KDPG and KHG aldolase 6 184 4.7E-45 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABE28_012505 26c28f5b36315c5c0dfa93ba46986f69 206 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 8 203 1.5E-56 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABE28_014550 b32e009c68c88b1aff6d781a48edac0c 255 Hamap MF_01805 Segregation and condensation protein A [scpA]. 3 247 26.177 T 11-10-2018 IPR003768 Segregation and condensation protein A ABE28_014550 b32e009c68c88b1aff6d781a48edac0c 255 Pfam PF02616 Segregation and condensation protein ScpA 20 243 9.9E-59 T 11-10-2018 IPR003768 Segregation and condensation protein A ABE28_019535 f113d36e4b5ba21201956cad064270d0 127 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 7.6E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_019535 f113d36e4b5ba21201956cad064270d0 127 Gene3D G3DSA:1.10.10.10 10 126 1.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_019535 f113d36e4b5ba21201956cad064270d0 127 SUPERFAMILY SSF46785 6 78 2.84E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_019535 f113d36e4b5ba21201956cad064270d0 127 SMART SM00345 17 76 3.3E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_020980 08c32b54525b7b49729530958766d86b 131 Gene3D G3DSA:3.10.180.10 3 128 6.5E-27 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020980 08c32b54525b7b49729530958766d86b 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 47 5.1E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_020980 08c32b54525b7b49729530958766d86b 131 SUPERFAMILY SSF54593 3 126 3.89E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_017900 ffebff9ea00d662232830d11fe063be4 146 SUPERFAMILY SSF55729 1 141 4.56E-33 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_017900 ffebff9ea00d662232830d11fe063be4 146 Pfam PF00583 Acetyltransferase (GNAT) family 26 133 5.3E-19 T 11-10-2018 IPR000182 GNAT domain ABE28_017900 ffebff9ea00d662232830d11fe063be4 146 Gene3D G3DSA:3.40.630.30 2 139 3.9E-37 T 11-10-2018 ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 Gene3D G3DSA:3.20.20.140 82 325 3.1E-79 T 11-10-2018 ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 Gene3D G3DSA:2.30.40.10 21 362 3.1E-79 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 Pfam PF01979 Amidohydrolase family 78 362 3.1E-17 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 SUPERFAMILY SSF51338 23 369 2.09E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 SUPERFAMILY SSF51556 82 326 3.12E-9 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_001950 f18432e7d0c1cb1c4c267a3bf4da93b6 581 Pfam PF13382 Adenine deaminase C-terminal domain 411 572 2.4E-36 T 11-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 ABE28_007430 00ceba40b7ff9e659319ce734076fd64 402 Hamap MF_01539 UPF0348 protein . 2 401 39.392 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 ABE28_007430 00ceba40b7ff9e659319ce734076fd64 402 SUPERFAMILY SSF52374 10 237 1.16E-17 T 11-10-2018 ABE28_007430 00ceba40b7ff9e659319ce734076fd64 402 Pfam PF05636 HIGH Nucleotidyl Transferase 1 383 1.2E-135 T 11-10-2018 IPR008513 Uncharacterised protein family UPF0348 ABE28_007430 00ceba40b7ff9e659319ce734076fd64 402 Gene3D G3DSA:3.40.50.620 1 244 5.9E-38 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_023970 b8316eb875fdd5a43e5003720f76b4e7 249 Pfam PF00005 ABC transporter 19 157 3.7E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_023970 b8316eb875fdd5a43e5003720f76b4e7 249 Gene3D G3DSA:3.40.50.300 1 239 9.9E-50 T 11-10-2018 ABE28_023970 b8316eb875fdd5a43e5003720f76b4e7 249 SMART SM00382 27 219 5.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_023970 b8316eb875fdd5a43e5003720f76b4e7 249 SUPERFAMILY SSF52540 2 222 6.51E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 Gene3D G3DSA:3.30.465.50 95 444 3.3E-87 T 11-10-2018 ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 Gene3D G3DSA:3.30.43.10 8 87 1.3E-20 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 Pfam PF08031 Berberine and berberine like 400 444 1.8E-18 T 11-10-2018 IPR012951 Berberine/berberine-like GO:0016491|GO:0050660|GO:0055114 ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 SUPERFAMILY SSF56176 8 202 2.2E-44 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 Gene3D G3DSA:3.40.462.20 204 398 3.3E-87 T 11-10-2018 ABE28_004830 e1ed3d58896efc04c7bdb4c155151221 447 Pfam PF01565 FAD binding domain 33 167 4.6E-28 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_006710 5da449277fc4b0f7ce5b0201fcfdb5b5 271 PIRSF PIRSF032067 2 269 9.1E-57 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 ABE28_006710 5da449277fc4b0f7ce5b0201fcfdb5b5 271 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 6 255 2.0E-69 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 ABE28_006710 5da449277fc4b0f7ce5b0201fcfdb5b5 271 Gene3D G3DSA:3.40.50.880 2 267 1.5E-70 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_006710 5da449277fc4b0f7ce5b0201fcfdb5b5 271 SUPERFAMILY SSF52317 9 220 6.54E-23 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_006710 5da449277fc4b0f7ce5b0201fcfdb5b5 271 Pfam PF03575 Peptidase family S51 6 209 1.0E-25 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_005670 68f6ac85652b947545eb72b0882de0f3 155 Pfam PF07681 DoxX 10 103 6.1E-8 T 11-10-2018 IPR032808 DoxX family ABE28_018990 4933fb13f7bec3ea851c1e34bab1779e 209 PIRSF PIRSF022704 12 208 1.4E-58 T 11-10-2018 IPR015987 Uncharacterised conserved protein UCP022704 ABE28_018990 4933fb13f7bec3ea851c1e34bab1779e 209 SUPERFAMILY SSF49899 6 201 5.54E-39 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily ABE28_018990 4933fb13f7bec3ea851c1e34bab1779e 209 Gene3D G3DSA:2.60.120.200 17 207 3.9E-60 T 11-10-2018 ABE28_018990 4933fb13f7bec3ea851c1e34bab1779e 209 Pfam PF07081 Protein of unknown function (DUF1349) 22 201 1.0E-62 T 11-10-2018 IPR009784 Protein of unknown function DUF1349 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 Gene3D G3DSA:1.10.8.420 1 53 1.0E-21 T 11-10-2018 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 TIGRFAM TIGR00615 recR: recombination protein RecR 2 196 8.6E-91 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 Gene3D G3DSA:3.40.1360.10 77 198 1.1E-48 T 11-10-2018 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 SUPERFAMILY SSF111304 1 198 3.01E-79 T 11-10-2018 IPR023627 Recombination protein RecR ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 SMART SM00493 80 165 1.1E-16 T 11-10-2018 IPR006171 TOPRIM domain ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.472 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 Pfam PF02132 RecR protein 40 78 6.6E-17 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger ABE28_000075 1c5713de7ba1971184244368f3ba3554 198 Pfam PF13662 Toprim domain 81 171 2.3E-25 T 11-10-2018 IPR006171 TOPRIM domain ABE28_020530 04d8b8f3137bfa3ba1205135f68dd98e 638 SMART SM00327 443 634 1.7E-11 T 11-10-2018 IPR002035 von Willebrand factor, type A ABE28_020530 04d8b8f3137bfa3ba1205135f68dd98e 638 SUPERFAMILY SSF53300 447 632 8.9E-14 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABE28_020530 04d8b8f3137bfa3ba1205135f68dd98e 638 Gene3D G3DSA:3.40.50.410 438 634 7.9E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily ABE28_003405 4f7069428526ffd153bcac0bd23ec371 301 SUPERFAMILY SSF51735 1 294 4.97E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003405 4f7069428526ffd153bcac0bd23ec371 301 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 123 1.1E-10 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_003405 4f7069428526ffd153bcac0bd23ec371 301 Pfam PF08338 Domain of unknown function (DUF1731) 248 292 1.6E-11 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 ABE28_003405 4f7069428526ffd153bcac0bd23ec371 301 Gene3D G3DSA:3.40.50.720 2 283 4.3E-62 T 11-10-2018 ABE28_003405 4f7069428526ffd153bcac0bd23ec371 301 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 5 289 4.0E-81 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 ABE28_002655 ba5d0f595c265092043f54116cee5582 165 SUPERFAMILY SSF116726 70 156 2.22E-16 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_002655 ba5d0f595c265092043f54116cee5582 165 Gene3D G3DSA:3.30.70.1450 83 163 4.4E-18 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_002655 ba5d0f595c265092043f54116cee5582 165 PIRSF PIRSF005028 1 162 3.8E-51 T 11-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT ABE28_002655 ba5d0f595c265092043f54116cee5582 165 Pfam PF02080 TrkA-C domain 89 158 2.6E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABE28_013870 89a012001a1e398a9131bc4383fd618d 154 SUPERFAMILY SSF46785 2 133 7.93E-38 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013870 89a012001a1e398a9131bc4383fd618d 154 Gene3D G3DSA:1.10.10.10 1 141 7.0E-41 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013870 89a012001a1e398a9131bc4383fd618d 154 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 3.8E-40 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_013870 89a012001a1e398a9131bc4383fd618d 154 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_013870 89a012001a1e398a9131bc4383fd618d 154 Pfam PF02082 Transcriptional regulator 1 82 5.6E-27 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 351 2.0E-158 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 SUPERFAMILY SSF53659 2 354 2.3E-122 T 11-10-2018 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 SMART SM01329 4 352 8.8E-194 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 4 352 6.4E-138 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 Gene3D G3DSA:3.40.718.10 2 370 4.3E-151 T 11-10-2018 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 49.329 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 ABE28_016525 79402620a124f9108e15ffc96eaf53b5 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 ABE28_006225 096f143ec82c1593c177a653d69b9f5f 303 SUPERFAMILY SSF53807 35 297 5.49E-50 T 11-10-2018 ABE28_006225 096f143ec82c1593c177a653d69b9f5f 303 Pfam PF01497 Periplasmic binding protein 59 277 1.1E-28 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_006225 096f143ec82c1593c177a653d69b9f5f 303 Gene3D G3DSA:3.40.50.1980 136 303 4.7E-58 T 11-10-2018 ABE28_006225 096f143ec82c1593c177a653d69b9f5f 303 Gene3D G3DSA:3.40.50.1980 47 135 1.9E-24 T 11-10-2018 ABE28_000130 9109b0c1a2c8aced5223d81d9fcd2779 332 Gene3D G3DSA:3.40.50.300 7 171 3.8E-54 T 11-10-2018 ABE28_000130 9109b0c1a2c8aced5223d81d9fcd2779 332 Pfam PF13177 DNA polymerase III, delta subunit 12 172 2.6E-58 T 11-10-2018 ABE28_000130 9109b0c1a2c8aced5223d81d9fcd2779 332 SUPERFAMILY SSF52540 11 199 2.58E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000130 9109b0c1a2c8aced5223d81d9fcd2779 332 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 16 199 2.2E-64 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 329 33.43 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 PIRSF PIRSF005485 1 340 1.3E-122 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 SUPERFAMILY SSF46785 1 82 1.36E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 Pfam PF01628 HrcA protein C terminal domain 104 322 3.0E-64 T 11-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 Gene3D G3DSA:3.30.390.60 128 229 6.9E-59 T 11-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 Gene3D G3DSA:3.30.450.40 104 334 6.9E-59 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 Gene3D G3DSA:1.10.10.10 1 83 3.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 2.2E-111 T 11-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 ABE28_015520 125e07fde491b7b98e5c2152077d071b 342 SUPERFAMILY SSF55781 71 339 3.73E-70 T 11-10-2018 ABE28_018485 31aed10015eca28f29d9da2112fdd01f 174 Pfam PF13302 Acetyltransferase (GNAT) domain 10 144 2.3E-20 T 11-10-2018 IPR000182 GNAT domain ABE28_018485 31aed10015eca28f29d9da2112fdd01f 174 Gene3D G3DSA:3.40.630.30 4 165 2.0E-24 T 11-10-2018 ABE28_018485 31aed10015eca28f29d9da2112fdd01f 174 SUPERFAMILY SSF55729 10 147 3.78E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_010085 a621a8f7aac89b08f57416b11383f40d 424 Gene3D G3DSA:1.20.1250.20 205 414 1.5E-20 T 11-10-2018 ABE28_010085 a621a8f7aac89b08f57416b11383f40d 424 Gene3D G3DSA:1.20.1250.20 1 193 2.5E-37 T 11-10-2018 ABE28_010085 a621a8f7aac89b08f57416b11383f40d 424 Pfam PF07690 Major Facilitator Superfamily 9 337 4.8E-43 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_010085 a621a8f7aac89b08f57416b11383f40d 424 SUPERFAMILY SSF103473 2 413 1.7E-67 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_013645 2a46c145dc9fdc3bed5b0cc92f9e7c19 162 Gene3D G3DSA:1.10.10.10 1 156 8.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013645 2a46c145dc9fdc3bed5b0cc92f9e7c19 162 SUPERFAMILY SSF46785 39 154 2.62E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013645 2a46c145dc9fdc3bed5b0cc92f9e7c19 162 Pfam PF13463 Winged helix DNA-binding domain 51 112 9.1E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_013645 2a46c145dc9fdc3bed5b0cc92f9e7c19 162 SMART SM00347 38 142 0.0011 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 13 308 8.5E-32 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 Gene3D G3DSA:3.30.70.1350 231 308 3.6E-9 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 Gene3D G3DSA:1.20.1510.10 12 226 3.0E-21 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 SUPERFAMILY SSF161111 10 229 4.84E-27 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 Pfam PF16916 Dimerisation domain of Zinc Transporter 235 305 7.9E-11 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 SUPERFAMILY SSF160240 233 307 3.14E-13 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 ABE28_012435 2172a94303be7017fdd993c0dfd03ed7 331 Pfam PF01545 Cation efflux family 17 224 3.9E-23 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 ABE28_009675 b8fbcd3872516406eb9960cb9d17ce45 182 Pfam PF01872 RibD C-terminal domain 4 174 6.8E-16 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ABE28_009675 b8fbcd3872516406eb9960cb9d17ce45 182 Gene3D G3DSA:3.40.430.10 2 180 4.3E-35 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_009675 b8fbcd3872516406eb9960cb9d17ce45 182 SUPERFAMILY SSF53597 4 179 2.36E-30 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_020680 3cc1d04721ea02236ca1987e73763653 378 SUPERFAMILY SSF53756 5 370 5.5E-132 T 11-10-2018 ABE28_020680 3cc1d04721ea02236ca1987e73763653 378 Gene3D G3DSA:3.40.50.2000 193 353 2.8E-147 T 11-10-2018 ABE28_020680 3cc1d04721ea02236ca1987e73763653 378 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 6 369 5.5E-155 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABE28_020680 3cc1d04721ea02236ca1987e73763653 378 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 366 1.2E-115 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_020680 3cc1d04721ea02236ca1987e73763653 378 Gene3D G3DSA:3.40.50.2000 8 364 2.8E-147 T 11-10-2018 ABE28_008925 5d2ca554b2d4ca5012427ad872c8af8d 424 Gene3D G3DSA:3.40.50.300 11 235 1.3E-52 T 11-10-2018 ABE28_008925 5d2ca554b2d4ca5012427ad872c8af8d 424 Pfam PF04466 Phage terminase large subunit 30 232 2.2E-46 T 11-10-2018 IPR035412 Phage terminase large subunit, N-terminal ABE28_008925 5d2ca554b2d4ca5012427ad872c8af8d 424 Gene3D G3DSA:3.30.420.280 238 418 1.2E-52 T 11-10-2018 ABE28_008925 5d2ca554b2d4ca5012427ad872c8af8d 424 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 30 410 1.1E-51 T 11-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 ABE28_008925 5d2ca554b2d4ca5012427ad872c8af8d 424 Pfam PF17288 Terminase RNAseH like domain 265 408 7.8E-19 T 11-10-2018 IPR035413 Phage terminase large subunit, C-terminal ABE28_004925 58b74f4e4b4034c360fed626c130fa17 182 Pfam PF09335 SNARE associated Golgi protein 32 147 3.3E-21 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_016870 4d5a18d3c75da27dbad9dab0403267f3 164 Gene3D G3DSA:3.40.630.30 1 164 2.2E-34 T 11-10-2018 ABE28_016870 4d5a18d3c75da27dbad9dab0403267f3 164 SUPERFAMILY SSF55729 1 164 1.06E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_016870 4d5a18d3c75da27dbad9dab0403267f3 164 Pfam PF13420 Acetyltransferase (GNAT) domain 3 157 3.6E-13 T 11-10-2018 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 18 360 72.684 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 Gene3D G3DSA:3.20.20.70 82 345 7.0E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 PIRSF PIRSF006004 11 364 1.5E-135 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 Pfam PF04055 Radical SAM superfamily 121 295 5.5E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 Pfam PF13394 4Fe-4S single cluster domain 126 232 7.2E-7 T 11-10-2018 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 Gene3D G3DSA:1.10.150.530 2 78 1.2E-20 T 11-10-2018 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 16 364 4.9E-160 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 ABE28_007710 4f7077cf9b07181938677fce95ae881b 364 SUPERFAMILY SSF102114 101 328 3.92E-15 T 11-10-2018 ABE28_006965 3b027de08be1ee7f566aa82396b7ef7f 276 SMART SM00318 64 198 1.4E-42 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 ABE28_006965 3b027de08be1ee7f566aa82396b7ef7f 276 Pfam PF00565 Staphylococcal nuclease homologue 90 197 2.1E-31 T 11-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 ABE28_006965 3b027de08be1ee7f566aa82396b7ef7f 276 Gene3D G3DSA:2.40.50.90 58 204 1.5E-51 T 11-10-2018 IPR035437 SNase-like, OB-fold superfamily ABE28_006965 3b027de08be1ee7f566aa82396b7ef7f 276 SUPERFAMILY SSF50199 62 201 5.89E-39 T 11-10-2018 ABE28_006965 3b027de08be1ee7f566aa82396b7ef7f 276 ProSitePatterns PS01123 Thermonuclease family signature 1. 75 100 - T 11-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 ABE28_022010 3c7c3859952dd8311f4a8cdb5d080968 373 SUPERFAMILY SSF55874 250 367 3.01E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_022010 3c7c3859952dd8311f4a8cdb5d080968 373 SMART SM00387 278 369 0.0091 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_022010 3c7c3859952dd8311f4a8cdb5d080968 373 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 283 367 1.6E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_022010 3c7c3859952dd8311f4a8cdb5d080968 373 Pfam PF07730 Histidine kinase 179 244 2.5E-21 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ABE28_022010 3c7c3859952dd8311f4a8cdb5d080968 373 Gene3D G3DSA:3.30.565.10 243 369 1.2E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 SUPERFAMILY SSF52518 314 503 6.31E-54 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 SUPERFAMILY SSF52922 490 620 2.75E-32 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 621 5.6E-288 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Gene3D G3DSA:3.40.50.920 493 626 1.9E-38 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Pfam PF02780 Transketolase, C-terminal domain 493 613 5.8E-31 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.678 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Gene3D G3DSA:3.40.50.970 315 490 5.5E-64 T 11-10-2018 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 9.5E-115 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 Pfam PF02779 Transketolase, pyrimidine binding domain 315 477 1.6E-39 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 SMART SM00861 316 481 1.3E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_014925 c36c4a68fc6851b76b6c5a2b84d0dcf3 630 SUPERFAMILY SSF52518 7 378 2.44E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 TIGRFAM TIGR00238 TIGR00238: KamA family protein 17 345 2.9E-142 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 Gene3D G3DSA:2.40.50.600 352 416 4.3E-19 T 11-10-2018 ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 Pfam PF12544 Lysine-2,3-aminomutase 324 449 2.1E-59 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 Gene3D G3DSA:3.20.20.70 66 351 2.2E-119 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 PIRSF PIRSF004911 423 469 670.0 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 PIRSF PIRSF004911 4 404 2.6E-161 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 SUPERFAMILY SSF102114 117 362 1.83E-30 T 11-10-2018 ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 Pfam PF13353 4Fe-4S single cluster domain 130 202 1.4E-4 T 11-10-2018 ABE28_018470 93ace8d5ea5cc4781a751d29ad3fd86a 478 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 24 429 1.4E-191 T 11-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 SUPERFAMILY SSF47413 3 58 2.16E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 SUPERFAMILY SSF53822 82 344 7.43E-60 T 11-10-2018 IPR028082 Periplasmic binding protein-like I ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 Gene3D G3DSA:3.40.50.2300 169 304 1.2E-64 T 11-10-2018 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 SMART SM00354 1 80 1.1E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 50 8.0E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 Gene3D G3DSA:3.40.50.2300 83 336 1.2E-64 T 11-10-2018 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 Pfam PF13377 Periplasmic binding protein-like domain 177 344 7.4E-41 T 11-10-2018 ABE28_013625 b3ebd8ae683ba75c5980f40f02dd69c0 349 Gene3D G3DSA:1.10.260.40 1 61 1.1E-21 T 11-10-2018 ABE28_023275 d30ad1222f3b76f58c1089175140a461 304 Pfam PF01522 Polysaccharide deacetylase 140 262 5.6E-36 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_023275 d30ad1222f3b76f58c1089175140a461 304 Gene3D G3DSA:3.20.20.370 79 299 7.9E-66 T 11-10-2018 ABE28_023275 d30ad1222f3b76f58c1089175140a461 304 SUPERFAMILY SSF88713 102 276 8.9E-43 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 SUPERFAMILY SSF81338 2 234 2.88E-72 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 136 154 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 44 68 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 81 100 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 166 188 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 2 21 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 PRINTS PR00783 Major intrinsic protein family signature 213 233 8.1E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 Gene3D G3DSA:1.20.1080.10 1 241 1.8E-75 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 230 8.0E-64 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 ProSitePatterns PS00221 MIP family signature. 62 70 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 ABE28_021025 9d26f67c309e583810575e89ed29b72b 274 Pfam PF00230 Major intrinsic protein 6 230 1.3E-48 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 ABE28_016555 75348fd54f91d3f5c104bd9ce1ed961c 164 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 74 135 9.7E-13 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ABE28_016555 75348fd54f91d3f5c104bd9ce1ed961c 164 Gene3D G3DSA:3.30.1380.10 7 135 2.1E-30 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_016555 75348fd54f91d3f5c104bd9ce1ed961c 164 SUPERFAMILY SSF55166 20 137 4.19E-24 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_016635 4a442d138da1c6e00b04682f979be15c 357 Pfam PF10646 Sporulation and spore germination 76 183 1.7E-18 T 11-10-2018 IPR019606 GerMN domain ABE28_016635 4a442d138da1c6e00b04682f979be15c 357 Pfam PF10646 Sporulation and spore germination 221 331 1.3E-12 T 11-10-2018 IPR019606 GerMN domain ABE28_016635 4a442d138da1c6e00b04682f979be15c 357 SMART SM00909 99 188 1.6E-18 T 11-10-2018 IPR019606 GerMN domain ABE28_016635 4a442d138da1c6e00b04682f979be15c 357 SMART SM00909 249 337 7.6E-12 T 11-10-2018 IPR019606 GerMN domain ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 Gene3D G3DSA:3.40.630.30 136 273 8.0E-24 T 11-10-2018 ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 Pfam PF00583 Acetyltransferase (GNAT) family 153 260 3.0E-15 T 11-10-2018 IPR000182 GNAT domain ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 SUPERFAMILY SSF55729 5 114 2.49E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 Gene3D G3DSA:3.40.630.30 2 115 4.0E-10 T 11-10-2018 ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 SUPERFAMILY SSF55729 139 271 4.9E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_021230 17082fe1a3a54dcc77e2588a54ae01b0 275 Pfam PF13673 Acetyltransferase (GNAT) domain 42 102 4.4E-7 T 11-10-2018 IPR000182 GNAT domain ABE28_008775 8772b25bc83fd22082a14780fffd5671 64 Pfam PF12728 Helix-turn-helix domain 10 60 4.9E-7 T 11-10-2018 ABE28_006295 5230cdaf521d88b0ef0a59d2824f0073 171 Hamap MF_01444 Putative phosphoesterase . 1 169 38.173 T 11-10-2018 IPR022932 Putative phosphoesterase YjcG ABE28_006295 5230cdaf521d88b0ef0a59d2824f0073 171 SUPERFAMILY SSF55144 1 168 1.24E-28 T 11-10-2018 IPR009097 Cyclic phosphodiesterase ABE28_006295 5230cdaf521d88b0ef0a59d2824f0073 171 Gene3D G3DSA:3.90.1140.10 1 171 6.9E-41 T 11-10-2018 ABE28_006295 5230cdaf521d88b0ef0a59d2824f0073 171 Pfam PF13563 2'-5' RNA ligase superfamily 13 154 9.4E-23 T 11-10-2018 ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 Gene3D G3DSA:1.20.1250.20 8 385 1.9E-51 T 11-10-2018 ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 SUPERFAMILY SSF103473 2 389 2.09E-62 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 Pfam PF07690 Major Facilitator Superfamily 246 390 5.0E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 Pfam PF07690 Major Facilitator Superfamily 19 238 1.6E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 ProSitePatterns PS00216 Sugar transport proteins signature 1. 67 83 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_020335 a22d22b58def17e44cb2304bcd7fe39c 399 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_022055 bade04034e6476b32cb0649a1cff1b9d 253 Pfam PF00005 ABC transporter 21 162 4.3E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_022055 bade04034e6476b32cb0649a1cff1b9d 253 Gene3D G3DSA:3.40.50.300 1 236 3.5E-65 T 11-10-2018 ABE28_022055 bade04034e6476b32cb0649a1cff1b9d 253 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_022055 bade04034e6476b32cb0649a1cff1b9d 253 SMART SM00382 30 219 5.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022055 bade04034e6476b32cb0649a1cff1b9d 253 SUPERFAMILY SSF52540 6 223 1.41E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004980 2ee3963537bc7bca3b6445043696d965 305 SUPERFAMILY SSF51569 12 294 5.13E-73 T 11-10-2018 ABE28_004980 2ee3963537bc7bca3b6445043696d965 305 Gene3D G3DSA:3.20.20.70 10 299 8.2E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_004980 2ee3963537bc7bca3b6445043696d965 305 PIRSF PIRSF001359 8 301 7.3E-83 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_004980 2ee3963537bc7bca3b6445043696d965 305 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 11 295 1.5E-75 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_004980 2ee3963537bc7bca3b6445043696d965 305 Pfam PF01116 Fructose-bisphosphate aldolase class-II 13 294 7.4E-84 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 SUPERFAMILY SSF56176 26 206 1.87E-35 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 SUPERFAMILY SSF55103 182 462 1.11E-19 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 Pfam PF04030 D-arabinono-1,4-lactone oxidase 293 472 9.7E-5 T 11-10-2018 IPR007173 D-arabinono-1,4-lactone oxidase GO:0003885|GO:0016020|GO:0055114 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 Gene3D G3DSA:3.30.43.10 53 461 1.0E-28 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 Pfam PF01565 FAD binding domain 49 177 4.2E-23 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 Gene3D G3DSA:3.40.462.10 212 434 1.0E-28 T 11-10-2018 IPR016170 Cytokinin dehydrogenase, C-terminal domain superfamily KEGG: 00908+1.5.99.12 ABE28_010515 0f6167b58a0fddfcd40f4aa9106b8253 476 Gene3D G3DSA:3.30.465.10 90 211 1.0E-28 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 ABE28_020635 8338cc580e848409f44ff0f9613971fe 190 Gene3D G3DSA:3.40.50.150 1 190 1.2E-70 T 11-10-2018 ABE28_020635 8338cc580e848409f44ff0f9613971fe 190 SUPERFAMILY SSF53335 11 151 5.17E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_020635 8338cc580e848409f44ff0f9613971fe 190 Pfam PF06962 Putative rRNA methylase 48 188 3.2E-52 T 11-10-2018 IPR010719 Putative rRNA methylase ABE28_018975 f3b3fb0dd9c2007230071e04b7041e3c 136 Pfam PF14436 Bacterial EndoU nuclease 65 135 2.4E-6 T 11-10-2018 IPR029501 Bacterial EndoU nuclease ABE28_013355 51bc21343215df8b087c63f127f1c8bc 63 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.3E-18 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_013355 51bc21343215df8b087c63f127f1c8bc 63 Pfam PF02416 mttA/Hcf106 family 4 54 1.0E-20 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABE28_013355 51bc21343215df8b087c63f127f1c8bc 63 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 63 17.7 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_013355 51bc21343215df8b087c63f127f1c8bc 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.6E-6 T 11-10-2018 ABE28_013355 51bc21343215df8b087c63f127f1c8bc 63 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.6E-6 T 11-10-2018 ABE28_022220 b65005012c5defc36e839a34052b905f 252 SUPERFAMILY SSF51366 1 252 2.43E-81 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_022220 b65005012c5defc36e839a34052b905f 252 Gene3D G3DSA:3.20.20.70 1 252 1.4E-105 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_022220 b65005012c5defc36e839a34052b905f 252 Pfam PF00977 Histidine biosynthesis protein 5 235 2.6E-88 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 ABE28_022220 b65005012c5defc36e839a34052b905f 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 1.6E-118 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABE28_022220 b65005012c5defc36e839a34052b905f 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 48.95 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 Pfam PF02153 Prephenate dehydrogenase 17 274 5.3E-74 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 Gene3D G3DSA:1.10.3660.10 182 296 2.9E-36 T 11-10-2018 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 Gene3D G3DSA:3.30.70.260 299 357 8.2E-6 T 11-10-2018 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 SUPERFAMILY SSF55021 291 347 4.2E-7 T 11-10-2018 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 SUPERFAMILY SSF51735 4 171 3.36E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 Pfam PF01842 ACT domain 298 350 2.1E-6 T 11-10-2018 IPR002912 ACT domain ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 SUPERFAMILY SSF48179 176 284 3.06E-33 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_014235 5687bef271f83d3fdb949e9edf44001b 367 Gene3D G3DSA:3.40.50.720 2 181 2.0E-46 T 11-10-2018 ABE28_002880 650741011c08ca981676d68bbc2991ec 445 Pfam PF00324 Amino acid permease 14 442 7.8E-105 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_002880 650741011c08ca981676d68bbc2991ec 445 PIRSF PIRSF006060 1 445 7.3E-63 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_002880 650741011c08ca981676d68bbc2991ec 445 Gene3D G3DSA:1.20.1740.10 4 445 4.4E-60 T 11-10-2018 ABE28_002880 650741011c08ca981676d68bbc2991ec 445 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_009665 218d08cfca07005e56879aa91063b55c 108 SUPERFAMILY SSF54909 1 106 6.56E-32 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_009665 218d08cfca07005e56879aa91063b55c 108 Gene3D G3DSA:3.30.70.100 9 102 7.4E-37 T 11-10-2018 ABE28_009665 218d08cfca07005e56879aa91063b55c 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 36 85 1.3E-5 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_014995 72f45d5f821ba7f835bb907424e7da95 67 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 1.9E-17 T 11-10-2018 IPR025664 Stage III sporulation protein AC/AD family ABE28_014995 72f45d5f821ba7f835bb907424e7da95 67 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 1.4E-30 T 11-10-2018 IPR009570 Stage III sporulation protein AC ABE28_012455 21131cdb7858e68d05b6266032630ae0 256 Pfam PF10127 Predicted nucleotidyltransferase 1 248 9.0E-89 T 11-10-2018 IPR018775 Nucleotidyltransferase, predicted ABE28_007570 fab8df6ed44f82b4c3468b573f2b1b89 153 Hamap MF_01197 Cell division protein SepF [sepF]. 1 143 20.798 T 11-10-2018 IPR023052 Cell division protein SepF GO:0090529 ABE28_007570 fab8df6ed44f82b4c3468b573f2b1b89 153 Pfam PF04472 Cell division protein SepF 64 135 4.8E-30 T 11-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 ABE28_007570 fab8df6ed44f82b4c3468b573f2b1b89 153 Gene3D G3DSA:3.30.110.150 57 152 2.2E-34 T 11-10-2018 IPR038594 SepF-like superfamily ABE28_013820 7319329cfae2911e690582aeca7b4708 512 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 7 502 9.6E-132 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 ABE28_013820 7319329cfae2911e690582aeca7b4708 512 Gene3D G3DSA:3.50.50.60 206 326 1.1E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013820 7319329cfae2911e690582aeca7b4708 512 Gene3D G3DSA:3.50.50.60 4 95 4.7E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013820 7319329cfae2911e690582aeca7b4708 512 PRINTS PR00419 Adrenodoxin reductase family signature 6 28 8.0E-6 T 11-10-2018 ABE28_013820 7319329cfae2911e690582aeca7b4708 512 PRINTS PR00419 Adrenodoxin reductase family signature 29 42 8.0E-6 T 11-10-2018 ABE28_013820 7319329cfae2911e690582aeca7b4708 512 Pfam PF01593 Flavin containing amine oxidoreductase 14 496 3.0E-27 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_013820 7319329cfae2911e690582aeca7b4708 512 SUPERFAMILY SSF51905 2 497 1.17E-66 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_004580 674e0147d969c620b8fd3304675c6db9 336 SUPERFAMILY SSF81345 7 330 9.29E-78 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_004580 674e0147d969c620b8fd3304675c6db9 336 Gene3D G3DSA:1.10.3470.10 8 334 1.7E-86 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_004580 674e0147d969c620b8fd3304675c6db9 336 Pfam PF01032 FecCD transport family 22 330 5.7E-86 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_008375 fd5e09c495f2a45a47cb86e89a504c49 142 SUPERFAMILY SSF158622 4 118 6.67E-33 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_008375 fd5e09c495f2a45a47cb86e89a504c49 142 PIRSF PIRSF021287 1 123 1.5E-48 T 11-10-2018 IPR016783 Biofilm formation YmcA ABE28_008375 fd5e09c495f2a45a47cb86e89a504c49 142 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 1.1E-22 T 11-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA ABE28_008375 fd5e09c495f2a45a47cb86e89a504c49 142 Gene3D G3DSA:1.20.1500.10 1 123 1.1E-33 T 11-10-2018 IPR023378 YheA/YmcA-like domain superfamily ABE28_007560 ba924be98dec7fe12ade06a068836aba 275 SUPERFAMILY SSF64438 17 272 2.01E-76 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic ABE28_007560 ba924be98dec7fe12ade06a068836aba 275 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 30 268 1.3E-68 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABE28_007560 ba924be98dec7fe12ade06a068836aba 275 Gene3D G3DSA:3.60.140.10 4 275 1.3E-85 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily ABE28_007560 ba924be98dec7fe12ade06a068836aba 275 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 269 1.6E-56 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase ABE28_004505 b414d088a9c6c59e83e188672d073997 245 SUPERFAMILY SSF53474 47 210 7.56E-20 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004505 b414d088a9c6c59e83e188672d073997 245 Pfam PF12695 Alpha/beta hydrolase family 65 228 4.4E-55 T 11-10-2018 IPR029059 Alpha/beta hydrolase fold-5 ABE28_004505 b414d088a9c6c59e83e188672d073997 245 Gene3D G3DSA:3.40.50.1820 27 244 5.3E-18 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 Pfam PF13500 AAA domain 3 209 7.3E-34 T 11-10-2018 ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 174 5.0E-34 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 SUPERFAMILY SSF52540 1 221 6.44E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 Gene3D G3DSA:3.40.50.300 3 218 9.7E-50 T 11-10-2018 ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 205 23.656 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABE28_020430 eeff4be98532e606caa403b8b75ef7ac 235 PIRSF PIRSF006755 1 228 1.1E-48 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Gene3D G3DSA:1.10.287.380 562 639 2.2E-9 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Gene3D G3DSA:3.40.50.300 292 557 1.2E-59 T 11-10-2018 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Pfam PF00005 ABC transporter 347 476 4.1E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 SMART SM00382 355 521 2.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 SMART SM00382 28 240 1.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Pfam PF00005 ABC transporter 19 195 3.3E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 ProSitePatterns PS00211 ABC transporters family signature. 448 462 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Pfam PF12848 ABC transporter 234 318 1.1E-23 T 11-10-2018 IPR032781 ABC-transporter extension domain ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 SUPERFAMILY SSF52540 4 248 3.36E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Gene3D G3DSA:3.40.50.300 1 289 2.3E-68 T 11-10-2018 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 Pfam PF16326 ABC transporter C-terminal domain 571 639 5.2E-16 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_001545 e8bfb6318f275069f2a33ff64e02f26f 639 SUPERFAMILY SSF52540 313 535 5.96E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_024185 489c9bec8e780513924d75a7b8653350 165 SUPERFAMILY SSF109854 6 156 1.01E-24 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024185 489c9bec8e780513924d75a7b8653350 165 Gene3D G3DSA:1.20.120.450 2 162 6.3E-33 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024185 489c9bec8e780513924d75a7b8653350 165 Pfam PF05163 DinB family 6 161 2.6E-33 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB ABE28_008505 dc6ac8cfad44e429bda81eeb2ecc61a1 135 SUPERFAMILY SSF50249 11 118 5.31E-30 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_008505 dc6ac8cfad44e429bda81eeb2ecc61a1 135 Pfam PF12172 Rubredoxin-like zinc ribbon domain (DUF35_N) 22 56 2.7E-13 T 11-10-2018 IPR022002 Domain of unknown function DUF35, rubredoxin-like zinc ribbon domain, N-terminal ABE28_008505 dc6ac8cfad44e429bda81eeb2ecc61a1 135 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 59 116 1.9E-15 T 11-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 Pfam PF00406 Adenylate kinase 5 190 6.8E-61 T 11-10-2018 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 Gene3D G3DSA:3.40.50.300 1 211 3.8E-84 T 11-10-2018 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 1.8E-17 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 SUPERFAMILY SSF52540 4 212 1.17E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.074 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 PRINTS PR00094 Adenylate kinase signature 160 175 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 PRINTS PR00094 Adenylate kinase signature 32 46 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 PRINTS PR00094 Adenylate kinase signature 4 17 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 PRINTS PR00094 Adenylate kinase signature 177 191 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 PRINTS PR00094 Adenylate kinase signature 81 97 3.0E-34 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 210 3.1E-80 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 ABE28_000690 1d0bfe8ec3b326e3adc9857ba406ba4e 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 ABE28_021290 0c7a09e38fa3decba911267fba1cb50a 69 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_021290 0c7a09e38fa3decba911267fba1cb50a 69 Gene3D G3DSA:1.10.8.910 8 68 2.5E-31 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily ABE28_021290 0c7a09e38fa3decba911267fba1cb50a 69 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 1.2E-22 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_021290 0c7a09e38fa3decba911267fba1cb50a 69 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_022025 57aa7b0551b072c3de9cec73d0bf5948 120 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 111 1.8E-34 T 11-10-2018 IPR018745 Domain of unknown function DUF2294 ABE28_019005 49476ea1932f740abffde6c4daff8600 68 Gene3D G3DSA:1.10.150.20 7 66 8.5E-12 T 11-10-2018 ABE28_019005 49476ea1932f740abffde6c4daff8600 68 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 11 65 0.008 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 ABE28_019005 49476ea1932f740abffde6c4daff8600 68 SUPERFAMILY SSF47789 11 65 2.75E-9 T 11-10-2018 ABE28_014750 875b4da8167f7ad543738f305b4345be 264 ProSitePatterns PS00211 ABC transporters family signature. 149 163 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_014750 875b4da8167f7ad543738f305b4345be 264 SUPERFAMILY SSF52540 2 230 1.97E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014750 875b4da8167f7ad543738f305b4345be 264 Pfam PF00005 ABC transporter 24 177 5.8E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_014750 875b4da8167f7ad543738f305b4345be 264 SMART SM00382 31 235 2.5E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_014750 875b4da8167f7ad543738f305b4345be 264 Gene3D G3DSA:3.40.50.300 1 261 9.7E-57 T 11-10-2018 ABE28_001210 998b78b6f5b2decb2c3bc5d851a029db 233 Gene3D G3DSA:3.40.50.1110 1 225 7.7E-40 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_001210 998b78b6f5b2decb2c3bc5d851a029db 233 SUPERFAMILY SSF52266 1 225 3.05E-35 T 11-10-2018 ABE28_001210 998b78b6f5b2decb2c3bc5d851a029db 233 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 211 1.2E-19 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain ABE28_023740 a74e42edd5a77d3e746dacee752a08d4 65 PIRSF PIRSF037263 1 65 2.5E-34 T 11-10-2018 IPR009296 Protein of unknown function DUF951 ABE28_023740 a74e42edd5a77d3e746dacee752a08d4 65 Pfam PF06107 Bacterial protein of unknown function (DUF951) 6 59 1.6E-29 T 11-10-2018 IPR009296 Protein of unknown function DUF951 ABE28_019160 f44a1801e67f4380a941394a2b7c8246 290 Gene3D G3DSA:3.40.190.10 37 261 1.8E-90 T 11-10-2018 ABE28_019160 f44a1801e67f4380a941394a2b7c8246 290 PIRSF PIRSF002854 1 271 7.4E-95 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_019160 f44a1801e67f4380a941394a2b7c8246 290 Pfam PF03180 NLPA lipoprotein 36 269 4.3E-87 T 11-10-2018 IPR004872 Lipoprotein NlpA family ABE28_019160 f44a1801e67f4380a941394a2b7c8246 290 Gene3D G3DSA:3.40.190.10 113 221 1.8E-90 T 11-10-2018 ABE28_019160 f44a1801e67f4380a941394a2b7c8246 290 SUPERFAMILY SSF53850 35 274 4.02E-81 T 11-10-2018 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Gene3D G3DSA:3.40.50.10490 1 57 3.4E-17 T 11-10-2018 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 1.8E-28 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Gene3D G3DSA:3.40.50.10490 227 417 8.1E-148 T 11-10-2018 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Gene3D G3DSA:3.40.50.10490 58 226 8.1E-148 T 11-10-2018 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Pfam PF00342 Phosphoglucose isomerase 76 296 5.3E-18 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Pfam PF00342 Phosphoglucose isomerase 375 426 3.9E-5 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.503 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 ABE28_021315 c299bb259770016075d02d2fc9db9a2c 448 SUPERFAMILY SSF53697 4 447 8.51E-145 T 11-10-2018 ABE28_013245 fb54b3d9d4a6156b42354658cddcffaf 80 Gene3D G3DSA:1.10.150.260 1 70 6.4E-28 T 11-10-2018 IPR036806 YozE SAM-like superfamily ABE28_013245 fb54b3d9d4a6156b42354658cddcffaf 80 SUPERFAMILY SSF140652 2 69 4.19E-28 T 11-10-2018 IPR036806 YozE SAM-like superfamily ABE28_013245 fb54b3d9d4a6156b42354658cddcffaf 80 Pfam PF06855 YozE SAM-like fold 4 68 1.7E-26 T 11-10-2018 IPR023089 YozE SAM-like domain ABE28_013245 fb54b3d9d4a6156b42354658cddcffaf 80 Hamap MF_01538 UPF0346 protein . 1 70 22.283 T 11-10-2018 IPR010673 Protein of unknown function UPF0346 ABE28_013245 fb54b3d9d4a6156b42354658cddcffaf 80 PIRSF PIRSF037262 1 72 1.1E-33 T 11-10-2018 IPR010673 Protein of unknown function UPF0346 ABE28_020620 ea260baf595506fe214576d4de200c3a 87 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 7.7E-28 T 11-10-2018 IPR019668 Uncharacterised protein family YtzC ABE28_000435 2eb5b18ef30d78243857d1e3a4cb6e67 358 ProSitePatterns PS00112 Phosphagen kinase active site signature. 168 174 - T 11-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 ABE28_000435 2eb5b18ef30d78243857d1e3a4cb6e67 358 SUPERFAMILY SSF55931 4 269 2.21E-86 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 ABE28_000435 2eb5b18ef30d78243857d1e3a4cb6e67 358 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 55 254 3.2E-73 T 11-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 ABE28_000435 2eb5b18ef30d78243857d1e3a4cb6e67 358 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 351 39.614 T 11-10-2018 IPR023660 Protein arginine kinase GO:0016775 ABE28_000435 2eb5b18ef30d78243857d1e3a4cb6e67 358 Gene3D G3DSA:3.30.590.10 9 262 1.4E-73 T 11-10-2018 ABE28_008515 97968e3d2443453a1ba5775179ebded4 316 SMART SM00849 17 222 5.7E-20 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008515 97968e3d2443453a1ba5775179ebded4 316 Pfam PF00753 Metallo-beta-lactamase superfamily 17 222 5.6E-19 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008515 97968e3d2443453a1ba5775179ebded4 316 SUPERFAMILY SSF56281 14 224 2.62E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_008515 97968e3d2443453a1ba5775179ebded4 316 Gene3D G3DSA:3.60.15.10 6 269 5.6E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_020820 887517e6934ddeec2c63886fbb787d23 306 PIRSF PIRSF005355 9 305 2.5E-91 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 ABE28_020820 887517e6934ddeec2c63886fbb787d23 306 Pfam PF01040 UbiA prenyltransferase family 30 260 5.7E-36 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 ABE28_020820 887517e6934ddeec2c63886fbb787d23 306 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 22 298 7.0E-39 T 11-10-2018 ABE28_020820 887517e6934ddeec2c63886fbb787d23 306 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 13 300 19.765 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABE28_004220 b267e825573ba9db7892304af4d72504 209 SUPERFAMILY SSF52317 22 197 2.14E-6 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_018450 8b699d05b45237e5d9edc7e19e989500 230 Pfam PF01144 Coenzyme A transferase 11 218 1.1E-60 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018450 8b699d05b45237e5d9edc7e19e989500 230 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 9 220 1.1E-68 T 11-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 ABE28_018450 8b699d05b45237e5d9edc7e19e989500 230 Gene3D G3DSA:3.40.1080.10 5 222 5.2E-75 T 11-10-2018 ABE28_018450 8b699d05b45237e5d9edc7e19e989500 230 SMART SM00882 9 220 2.9E-68 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 ABE28_018450 8b699d05b45237e5d9edc7e19e989500 230 SUPERFAMILY SSF100950 4 222 4.43E-75 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_021495 748f953f1fc9c1a4539936b8dc507200 112 Pfam PF03334 Na+/H+ antiporter subunit 12 93 6.2E-27 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ABE28_021495 748f953f1fc9c1a4539936b8dc507200 112 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 12 107 3.8E-30 T 11-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 ABE28_019600 50ff6fabe08b12d4b554d32bf7ff4dc4 303 Pfam PF13791 Sigma factor regulator C-terminal 163 291 5.2E-19 T 11-10-2018 IPR025672 Sigma factor regulator C-terminal domain ABE28_019600 50ff6fabe08b12d4b554d32bf7ff4dc4 303 Pfam PF13800 Sigma factor regulator N-terminal 6 93 7.9E-28 T 11-10-2018 IPR029101 Sigma factor regulator, N-terminal ABE28_013890 7fa3dc09cf83953819bb08c929389a20 137 Pfam PF13456 Reverse transcriptase-like 7 123 2.7E-16 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 ABE28_013890 7fa3dc09cf83953819bb08c929389a20 137 SUPERFAMILY SSF53098 1 128 2.28E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_013890 7fa3dc09cf83953819bb08c929389a20 137 Gene3D G3DSA:3.30.420.10 1 137 2.8E-27 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_014625 de6f795b020a98651746337822b926b8 270 SUPERFAMILY SSF53167 2 270 1.18E-102 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 ABE28_014625 de6f795b020a98651746337822b926b8 270 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 21 267 3.3E-121 T 11-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 ABE28_014625 de6f795b020a98651746337822b926b8 270 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 21 268 4.9E-116 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 ABE28_014625 de6f795b020a98651746337822b926b8 270 Gene3D G3DSA:3.40.50.1580 1 269 2.0E-119 T 11-10-2018 ABE28_014625 de6f795b020a98651746337822b926b8 270 Pfam PF01048 Phosphorylase superfamily 22 267 2.2E-56 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 ABE28_014625 de6f795b020a98651746337822b926b8 270 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 74 115 - T 11-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 ABE28_014625 de6f795b020a98651746337822b926b8 270 PIRSF PIRSF000477 1 270 1.2E-122 T 11-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 ABE28_003195 d5dfd97fd261ffb5f7ea9186cf67fd52 241 Gene3D G3DSA:3.90.226.10 4 200 8.1E-42 T 11-10-2018 ABE28_003195 d5dfd97fd261ffb5f7ea9186cf67fd52 241 SUPERFAMILY SSF52096 13 186 5.91E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_003195 d5dfd97fd261ffb5f7ea9186cf67fd52 241 Pfam PF00574 Clp protease 55 183 1.2E-27 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA ABE28_018550 77c86805ea574be1619af82273537f78 130 Pfam PF04134 Protein of unknown function, DUF393 5 113 8.4E-35 T 11-10-2018 IPR007263 Protein of unknown function DUF393 ABE28_020295 ff7178c6a20b9f417db6ffc997ce9702 232 Gene3D G3DSA:3.10.180.10 1 230 3.5E-58 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_020295 ff7178c6a20b9f417db6ffc997ce9702 232 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 113 1.5E-5 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_020295 ff7178c6a20b9f417db6ffc997ce9702 232 SUPERFAMILY SSF54593 1 118 1.79E-16 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_005435 f654d7779a5bbb18149084f2ffd2e28b 104 SUPERFAMILY SSF117782 1 104 7.72E-39 T 11-10-2018 IPR035439 UPF0145 domain superfamily ABE28_005435 f654d7779a5bbb18149084f2ffd2e28b 104 Gene3D G3DSA:3.30.110.70 1 104 6.7E-34 T 11-10-2018 ABE28_005435 f654d7779a5bbb18149084f2ffd2e28b 104 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 103 25.292 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 ABE28_005435 f654d7779a5bbb18149084f2ffd2e28b 104 Pfam PF01906 Putative heavy-metal-binding 1 103 2.5E-40 T 11-10-2018 IPR002765 Uncharacterised protein family UPF0145 ABE28_013445 c1dbb4cf47a4b7bc950a9d096e709d58 281 SUPERFAMILY SSF82549 1 279 2.25E-71 T 11-10-2018 ABE28_013445 c1dbb4cf47a4b7bc950a9d096e709d58 281 Gene3D G3DSA:3.40.50.10170 1 150 2.9E-40 T 11-10-2018 ABE28_013445 c1dbb4cf47a4b7bc950a9d096e709d58 281 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 279 4.7E-69 T 11-10-2018 IPR003797 DegV ABE28_013445 c1dbb4cf47a4b7bc950a9d096e709d58 281 Gene3D G3DSA:3.30.1180.10 152 279 3.9E-29 T 11-10-2018 ABE28_013445 c1dbb4cf47a4b7bc950a9d096e709d58 281 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 277 8.4E-76 T 11-10-2018 IPR003797 DegV ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 SUPERFAMILY SSF51261 273 470 9.42E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 SMART SM01208 265 343 1.9E-15 T 11-10-2018 IPR011098 G5 domain ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 Gene3D G3DSA:2.20.230.10 265 337 1.4E-13 T 11-10-2018 ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 Pfam PF01551 Peptidase family M23 372 466 5.0E-31 T 11-10-2018 IPR016047 Peptidase M23 ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 Pfam PF07501 G5 domain 268 342 7.7E-15 T 11-10-2018 IPR011098 G5 domain ABE28_023670 73f063bffdf8b66d3f92063b6d54dbcd 472 Gene3D G3DSA:2.70.70.10 338 471 1.1E-40 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 5.8E-134 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 Pfam PF16199 Radical_SAM C-terminal domain 220 303 8.4E-25 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 Gene3D G3DSA:3.80.30.20 50 247 2.5E-12 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 SMART SM00729 32 259 1.3E-41 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 SUPERFAMILY SSF102114 7 314 9.94E-54 T 11-10-2018 ABE28_020630 2c1fd49a00e17fec2514d493c100b63a 322 Pfam PF04055 Radical SAM superfamily 52 214 1.5E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_008865 d7dea25819f32845ba4e0184609ef6c8 166 Gene3D G3DSA:3.30.40.60 13 164 2.9E-5 T 11-10-2018 ABE28_008865 d7dea25819f32845ba4e0184609ef6c8 166 Pfam PF01844 HNH endonuclease 65 104 8.5E-5 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ABE28_008865 d7dea25819f32845ba4e0184609ef6c8 166 SMART SM00507 52 101 0.0038 T 11-10-2018 IPR003615 HNH nuclease ABE28_003185 921e97592f8ca2c25718d6fdf7988542 550 Gene3D G3DSA:3.40.50.300 22 240 1.0E-19 T 11-10-2018 ABE28_003185 921e97592f8ca2c25718d6fdf7988542 550 Pfam PF03354 Phage Terminase 66 533 4.3E-43 T 11-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type ABE28_018790 10de9ae5003bc203c5e4fd3b71398d6b 399 SUPERFAMILY SSF103473 5 393 6.02E-55 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_018790 10de9ae5003bc203c5e4fd3b71398d6b 399 Pfam PF07690 Major Facilitator Superfamily 18 315 2.9E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018790 10de9ae5003bc203c5e4fd3b71398d6b 399 Gene3D G3DSA:1.20.1250.20 5 385 9.0E-43 T 11-10-2018 ABE28_012655 c8cb741c426244089f65e2999c844285 202 Gene3D G3DSA:3.40.50.1820 1 200 7.6E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_012655 c8cb741c426244089f65e2999c844285 202 Pfam PF01738 Dienelactone hydrolase family 75 183 1.1E-10 T 11-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 ABE28_012655 c8cb741c426244089f65e2999c844285 202 SUPERFAMILY SSF53474 2 200 2.14E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_009765 335fbeb81a6f43a8cc5cf631bdc30c05 167 Gene3D G3DSA:1.10.10.10 1 154 2.3E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009765 335fbeb81a6f43a8cc5cf631bdc30c05 167 SUPERFAMILY SSF46785 3 144 1.43E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009765 335fbeb81a6f43a8cc5cf631bdc30c05 167 Pfam PF02082 Transcriptional regulator 1 83 9.6E-26 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_009765 335fbeb81a6f43a8cc5cf631bdc30c05 167 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 141 5.4E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_009765 335fbeb81a6f43a8cc5cf631bdc30c05 167 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site ABE28_006250 14e7a413d0b744062f4688f5500a4da6 156 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 30 147 1.2E-37 T 11-10-2018 IPR005562 SpoVA ABE28_006250 14e7a413d0b744062f4688f5500a4da6 156 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 13 150 6.6E-60 T 11-10-2018 IPR014203 Sporulation stage V, protein AC ABE28_015440 a07158267ea10f1c227fd7d91a6bba14 395 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 386 5.9E-129 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD ABE28_015440 a07158267ea10f1c227fd7d91a6bba14 395 Pfam PF06898 Putative stage IV sporulation protein YqfD 7 385 1.8E-121 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD ABE28_015440 a07158267ea10f1c227fd7d91a6bba14 395 PIRSF PIRSF029895 1 395 7.0E-157 T 11-10-2018 IPR010690 Putative stage IV sporulation YqfD ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 Pfam PF00155 Aminotransferase class I and II 37 377 6.0E-64 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 Gene3D G3DSA:3.40.640.10 52 286 1.2E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 SUPERFAMILY SSF53383 4 382 8.34E-113 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 16 378 1.1E-144 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 ABE28_020420 c89a985bf312b0ea400dea8db6eba640 396 Gene3D G3DSA:3.90.1150.10 33 375 1.2E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 Pfam PF13193 AMP-binding enzyme C-terminal domain 437 512 4.9E-20 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 Pfam PF00501 AMP-binding enzyme 27 428 3.1E-103 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 SUPERFAMILY SSF56801 15 523 2.62E-149 T 11-10-2018 ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 ProSitePatterns PS00455 Putative AMP-binding domain signature. 177 188 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 Gene3D G3DSA:3.40.50.12780 19 419 5.0E-117 T 11-10-2018 ABE28_010110 6768086962e3752bbca231e2ee86a49c 531 Gene3D G3DSA:3.30.300.310 424 528 2.8E-32 T 11-10-2018 ABE28_022520 85822b48661fa7a3033b71a7a92bad4c 247 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 57 233 1.6E-58 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ABE28_022520 85822b48661fa7a3033b71a7a92bad4c 247 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 62 227 9.1E-61 T 11-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 ABE28_022520 85822b48661fa7a3033b71a7a92bad4c 247 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 4 242 60.193 T 11-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 ABE28_024010 7282b35a87231ef1299401b381dcace6 319 Gene3D G3DSA:3.40.50.1100 47 155 7.5E-101 T 11-10-2018 ABE28_024010 7282b35a87231ef1299401b381dcace6 319 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 12 306 2.0E-60 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme ABE28_024010 7282b35a87231ef1299401b381dcace6 319 Gene3D G3DSA:3.40.50.1100 10 314 7.5E-101 T 11-10-2018 ABE28_024010 7282b35a87231ef1299401b381dcace6 319 SUPERFAMILY SSF53686 6 317 5.76E-84 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme ABE28_011910 e6edf43af8bc10b081ad12c5af317ae0 340 Pfam PF03601 Conserved hypothetical protein 698 16 318 1.1E-83 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ABE28_003925 cdbf66610decf4256e7d8633d257d644 299 Pfam PF01261 Xylose isomerase-like TIM barrel 22 221 1.8E-19 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_003925 cdbf66610decf4256e7d8633d257d644 299 Gene3D G3DSA:3.20.20.150 3 264 2.0E-38 T 11-10-2018 ABE28_003925 cdbf66610decf4256e7d8633d257d644 299 SUPERFAMILY SSF51658 18 250 6.29E-32 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_021690 ae7b7c2e98749bbe5b99fb0697923586 248 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 18 234 3.3E-50 T 11-10-2018 IPR014197 Sporulation protein YunB ABE28_021690 ae7b7c2e98749bbe5b99fb0697923586 248 PIRSF PIRSF021383 3 245 3.5E-57 T 11-10-2018 IPR014197 Sporulation protein YunB ABE28_021690 ae7b7c2e98749bbe5b99fb0697923586 248 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 142 231 3.3E-29 T 11-10-2018 IPR014197 Sporulation protein YunB ABE28_023045 f7d510a71ec52e73454ef2948a52aa16 146 Pfam PF09148 Domain of unknown function (DUF1934) 13 140 1.7E-27 T 11-10-2018 IPR015231 Protein of unknown function DUF1934 ABE28_023045 f7d510a71ec52e73454ef2948a52aa16 146 Gene3D G3DSA:2.40.128.20 4 146 1.8E-39 T 11-10-2018 IPR012674 Calycin ABE28_023045 f7d510a71ec52e73454ef2948a52aa16 146 SUPERFAMILY SSF50814 8 144 3.43E-30 T 11-10-2018 IPR012674 Calycin ABE28_011015 86a70dbc52c1a0988b2a472949a34403 184 SUPERFAMILY SSF52499 2 182 2.22E-47 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_011015 86a70dbc52c1a0988b2a472949a34403 184 Pfam PF00857 Isochorismatase family 5 179 3.1E-34 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABE28_011015 86a70dbc52c1a0988b2a472949a34403 184 Gene3D G3DSA:3.40.50.850 3 184 9.6E-49 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_005030 bace8327c01544e4b87b81d2c25180af 312 Gene3D G3DSA:3.20.20.150 8 306 4.0E-34 T 11-10-2018 ABE28_005030 bace8327c01544e4b87b81d2c25180af 312 SUPERFAMILY SSF51658 8 278 4.15E-27 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_005030 bace8327c01544e4b87b81d2c25180af 312 Pfam PF01261 Xylose isomerase-like TIM barrel 52 224 6.4E-17 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_014165 7b764fae060c47bbfad13239c7568133 141 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.41 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ABE28_014165 7b764fae060c47bbfad13239c7568133 141 SUPERFAMILY SSF52335 1 133 7.06E-50 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_014165 7b764fae060c47bbfad13239c7568133 141 PIRSF PIRSF006614 1 140 6.6E-61 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ABE28_014165 7b764fae060c47bbfad13239c7568133 141 Gene3D G3DSA:3.40.50.1380 1 140 2.3E-55 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily ABE28_014165 7b764fae060c47bbfad13239c7568133 141 Pfam PF02142 MGS-like domain 15 107 1.5E-17 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_014165 7b764fae060c47bbfad13239c7568133 141 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 61 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ABE28_014165 7b764fae060c47bbfad13239c7568133 141 SMART SM00851 14 107 3.8E-22 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain ABE28_014165 7b764fae060c47bbfad13239c7568133 141 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 121 6.0E-57 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 ABE28_017555 0b5619b832372cfa976945364d86336f 444 Pfam PF00171 Aldehyde dehydrogenase family 5 437 1.0E-94 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 213 220 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 Gene3D G3DSA:3.40.309.10 217 419 3.7E-155 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 PIRSF PIRSF036492 1 444 9.1E-165 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 241 252 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 Gene3D G3DSA:3.40.605.10 24 439 3.7E-155 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_017555 0b5619b832372cfa976945364d86336f 444 SUPERFAMILY SSF53720 5 441 4.32E-118 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_013725 7116f06f23e7077b815d744f8e0cc17f 484 Pfam PF03606 C4-dicarboxylate anaerobic carrier 35 477 1.7E-104 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 ABE28_000595 af6dfdbd0379ee1d9b9dda3d23313d6a 94 ProSitePatterns PS00050 Ribosomal protein L23 signature. 76 91 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000595 af6dfdbd0379ee1d9b9dda3d23313d6a 94 Pfam PF00276 Ribosomal protein L23 5 87 9.5E-32 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABE28_000595 af6dfdbd0379ee1d9b9dda3d23313d6a 94 Gene3D G3DSA:3.30.70.330 1 94 1.9E-31 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily ABE28_000595 af6dfdbd0379ee1d9b9dda3d23313d6a 94 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 4 94 20.987 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 ABE28_000595 af6dfdbd0379ee1d9b9dda3d23313d6a 94 SUPERFAMILY SSF54189 1 89 3.31E-30 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_008500 98c375de1d98e88e53d703d7117d045d 387 SUPERFAMILY SSF53901 233 373 6.87E-20 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_008500 98c375de1d98e88e53d703d7117d045d 387 Gene3D G3DSA:3.40.47.10 1 387 1.3E-100 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_008500 98c375de1d98e88e53d703d7117d045d 387 SUPERFAMILY SSF53901 7 227 5.5E-23 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_008500 98c375de1d98e88e53d703d7117d045d 387 PIRSF PIRSF000429 1 383 1.8E-23 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_004380 9bc3da320fcdb76e11f7fa11bd13fbfd 359 Gene3D G3DSA:3.30.300.210 213 359 7.0E-16 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_004380 9bc3da320fcdb76e11f7fa11bd13fbfd 359 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 3 357 3.8E-71 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_004380 9bc3da320fcdb76e11f7fa11bd13fbfd 359 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 355 3.3E-27 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 SUPERFAMILY SSF64288 61 240 4.24E-52 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 SUPERFAMILY SSF46785 1 85 5.69E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 5.3E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 Pfam PF07702 UTRA domain 94 233 2.2E-40 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 SMART SM00866 94 233 3.0E-41 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 SMART SM00345 14 73 1.2E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.7E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.7E-8 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 Gene3D G3DSA:1.10.10.10 8 75 2.5E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013655 1cfb09e0708733b76f3918c3e95e6d7f 243 Gene3D G3DSA:3.40.1410.10 76 242 1.9E-52 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 Gene3D G3DSA:3.40.50.720 1 256 4.8E-60 T 11-10-2018 ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 SUPERFAMILY SSF51735 6 256 2.38E-67 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 PIRSF PIRSF000094 2 257 3.3E-103 T 11-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 1.2E-85 T 11-10-2018 ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 6.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 6.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 6.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_006220 84c7b967e481c4d5363a40813f11bd79 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 6.8E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_022045 c46794bdf628dff80325342eb0ad5dda 549 Pfam PF00890 FAD binding domain 4 532 1.9E-106 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_022045 c46794bdf628dff80325342eb0ad5dda 549 SUPERFAMILY SSF51905 2 548 6.79E-38 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_022045 c46794bdf628dff80325342eb0ad5dda 549 PIRSF PIRSF036654 1 549 8.5E-297 T 11-10-2018 IPR014614 Uncharacterised conserved protein UCP036654 GO:0016627|GO:0055114 ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 Gene3D G3DSA:3.40.1700.10 102 255 7.8E-62 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 SUPERFAMILY SSF143597 40 240 1.83E-70 T 11-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.334 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 4 254 9.8E-94 T 11-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 4.9E-43 T 11-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal ABE28_000885 a1c9fab22b73762198163d85bce3beb4 274 PIRSF PIRSF004793 3 269 2.2E-93 T 11-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 ABE28_014815 ef86a71b839a73c59688677ba4079c0e 329 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 309 3.6E-54 T 11-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal ABE28_014815 ef86a71b839a73c59688677ba4079c0e 329 Gene3D G3DSA:1.20.120.940 141 314 7.0E-54 T 11-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily ABE28_014815 ef86a71b839a73c59688677ba4079c0e 329 Pfam PF06081 Aromatic acid exporter family member 1 2 142 2.3E-50 T 11-10-2018 IPR010343 Aromatic acid exporter family member 1 ABE28_021940 454606e4a6fc13f7b4cbc361a095900e 252 Gene3D G3DSA:3.40.50.300 1 251 2.0E-69 T 11-10-2018 ABE28_021940 454606e4a6fc13f7b4cbc361a095900e 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_021940 454606e4a6fc13f7b4cbc361a095900e 252 SUPERFAMILY SSF52540 2 226 7.68E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_021940 454606e4a6fc13f7b4cbc361a095900e 252 Pfam PF00005 ABC transporter 18 164 2.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_021940 454606e4a6fc13f7b4cbc361a095900e 252 SMART SM00382 26 213 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_012735 b099ce5a2d0800ad5e8e568dde6c77f5 106 Pfam PF10925 Protein of unknown function (DUF2680) 36 92 1.8E-17 T 11-10-2018 IPR024485 Protein of unknown function DUF2680 ABE28_012735 b099ce5a2d0800ad5e8e568dde6c77f5 106 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 23 100 4.0E-11 T 11-10-2018 IPR024485 Protein of unknown function DUF2680 ABE28_011515 ffda12cab59a7427e3581122ab01c2cf 304 Gene3D G3DSA:3.90.850.10 82 303 1.5E-82 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_011515 ffda12cab59a7427e3581122ab01c2cf 304 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 87 293 3.7E-68 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_011515 ffda12cab59a7427e3581122ab01c2cf 304 SUPERFAMILY SSF56529 78 294 4.06E-75 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_005955 fe33d780bad4cc5b0a51e6f5092b0972 262 SUPERFAMILY SSF56281 27 225 1.54E-36 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_005955 fe33d780bad4cc5b0a51e6f5092b0972 262 SMART SM00849 29 220 2.6E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_005955 fe33d780bad4cc5b0a51e6f5092b0972 262 Pfam PF00753 Metallo-beta-lactamase superfamily 30 185 1.0E-15 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_014655 0b966bc23af0e7b85ec4dae75a9fde9a 187 Pfam PF13302 Acetyltransferase (GNAT) domain 16 159 4.7E-25 T 11-10-2018 IPR000182 GNAT domain ABE28_014655 0b966bc23af0e7b85ec4dae75a9fde9a 187 Gene3D G3DSA:3.40.630.30 5 184 7.9E-41 T 11-10-2018 ABE28_014655 0b966bc23af0e7b85ec4dae75a9fde9a 187 SUPERFAMILY SSF55729 9 171 1.65E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 507 4.9E-279 T 11-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 451 5.5E-35 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 PIRSF PIRSF000538 2 504 1.8E-134 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 1.5E-77 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 SUPERFAMILY SSF53067 4 248 4.99E-63 T 11-10-2018 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 Gene3D G3DSA:3.30.420.40 248 513 5.3E-87 T 11-10-2018 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 SUPERFAMILY SSF53067 249 498 5.65E-65 T 11-10-2018 ABE28_001660 a06a92cba9a706c6d44f682b91d97666 514 Gene3D G3DSA:3.30.420.40 1 247 2.3E-76 T 11-10-2018 ABE28_022585 bb597e0021ffd5df04b205d86d8cab9a 158 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 38 155 1.4E-33 T 11-10-2018 IPR030910 SLAP domain, Bacillus-type ABE28_000920 1207676dde77991d72566346ef44ffb3 236 Gene3D G3DSA:3.40.50.620 11 135 1.0E-20 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_000920 1207676dde77991d72566346ef44ffb3 236 TIGRFAM TIGR00290 MJ0570_dom: MJ0570-related uncharacterized domain 15 230 8.4E-45 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 ABE28_000920 1207676dde77991d72566346ef44ffb3 236 Pfam PF01902 Diphthamide synthase 15 226 1.5E-45 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 ABE28_000920 1207676dde77991d72566346ef44ffb3 236 SUPERFAMILY SSF52402 15 227 1.28E-61 T 11-10-2018 ABE28_000920 1207676dde77991d72566346ef44ffb3 236 Gene3D G3DSA:3.90.1490.10 136 230 8.7E-18 T 11-10-2018 ABE28_021260 2e79bdf76b727eb2ba772855b36bc898 287 Gene3D G3DSA:3.30.750.24 162 281 5.0E-28 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_021260 2e79bdf76b727eb2ba772855b36bc898 287 SUPERFAMILY SSF52091 167 276 2.55E-11 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_004840 85f1ebb436feb54847ebf9a737a59771 139 Pfam PF17326 Family of unknown function (DUF5365) 1 118 2.4E-34 T 11-10-2018 IPR020355 Uncharacterised protein family YhcU ABE28_004840 85f1ebb436feb54847ebf9a737a59771 139 ProDom PD081567 YHCU 1 115 1.0E-14 T 11-10-2018 IPR020355 Uncharacterised protein family YhcU ABE28_006595 2fee0f79c3ac2f79d13ce75c114a8781 401 SUPERFAMILY SSF103473 9 397 1.29E-86 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_006595 2fee0f79c3ac2f79d13ce75c114a8781 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 272 287 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_006595 2fee0f79c3ac2f79d13ce75c114a8781 401 Pfam PF07690 Major Facilitator Superfamily 22 268 2.4E-39 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_006595 2fee0f79c3ac2f79d13ce75c114a8781 401 Gene3D G3DSA:1.20.1250.20 10 401 1.3E-92 T 11-10-2018 ABE28_006595 2fee0f79c3ac2f79d13ce75c114a8781 401 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_006810 1062d207afe751373f4eb4a3fcce9ff4 63 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 6 60 1.7E-21 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_006810 1062d207afe751373f4eb4a3fcce9ff4 63 Gene3D G3DSA:1.10.8.910 6 63 1.2E-29 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily ABE28_006810 1062d207afe751373f4eb4a3fcce9ff4 63 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 39 53 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_006810 1062d207afe751373f4eb4a3fcce9ff4 63 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 21 30 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_004210 b7d085e6a69550d3d6144641b1d9f9a8 187 SUPERFAMILY SSF52499 3 152 7.2E-42 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_004210 b7d085e6a69550d3d6144641b1d9f9a8 187 Pfam PF00857 Isochorismatase family 4 142 4.7E-36 T 11-10-2018 IPR000868 Isochorismatase-like GO:0003824 ABE28_004210 b7d085e6a69550d3d6144641b1d9f9a8 187 Gene3D G3DSA:3.40.50.850 2 163 9.0E-45 T 11-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 ABE28_021475 ca9f4dd948e8812b37fe7a14d266b9ad 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 8.6E-33 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABE28_001230 d77df4343e9568ffa9b47676b03673a6 428 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 15 427 5.6E-164 T 11-10-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 ABE28_001230 d77df4343e9568ffa9b47676b03673a6 428 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 66 417 1.7E-91 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABE28_001230 d77df4343e9568ffa9b47676b03673a6 428 Pfam PF04261 Dyp-type peroxidase family 66 417 1.6E-106 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 ABE28_001230 d77df4343e9568ffa9b47676b03673a6 428 SUPERFAMILY SSF54909 61 421 1.07E-88 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_008015 f924df547f3ae132dbde55963a62a0ec 120 Pfam PF00072 Response regulator receiver domain 5 116 1.7E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008015 f924df547f3ae132dbde55963a62a0ec 120 Gene3D G3DSA:3.40.50.2300 2 120 3.8E-41 T 11-10-2018 ABE28_008015 f924df547f3ae132dbde55963a62a0ec 120 SMART SM00448 3 115 9.1E-41 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_008015 f924df547f3ae132dbde55963a62a0ec 120 SUPERFAMILY SSF52172 4 120 1.71E-41 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_020425 a12d3e32189ec2e564dcd5973738a4a5 194 Pfam PF02632 BioY family 27 173 7.5E-37 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_020425 a12d3e32189ec2e564dcd5973738a4a5 194 Gene3D G3DSA:1.10.1760.20 1 180 6.0E-49 T 11-10-2018 ABE28_020425 a12d3e32189ec2e564dcd5973738a4a5 194 PIRSF PIRSF016661 1 182 6.2E-51 T 11-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 ABE28_023625 a59b42922824b7d0d8c05fb3c160adda 110 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 78 6.4E-12 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_023625 a59b42922824b7d0d8c05fb3c160adda 110 Gene3D G3DSA:3.30.70.100 1 106 2.2E-32 T 11-10-2018 ABE28_023625 a59b42922824b7d0d8c05fb3c160adda 110 SUPERFAMILY SSF54909 1 103 2.22E-23 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_019055 456182fffe4805798b77187eb6acad5e 151 Gene3D G3DSA:3.90.79.10 4 148 5.4E-26 T 11-10-2018 ABE28_019055 456182fffe4805798b77187eb6acad5e 151 PRINTS PR00502 NUDIX hydrolase family signature 45 60 4.9E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_019055 456182fffe4805798b77187eb6acad5e 151 PRINTS PR00502 NUDIX hydrolase family signature 31 45 4.9E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_019055 456182fffe4805798b77187eb6acad5e 151 Pfam PF00293 NUDIX domain 8 112 9.9E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_019055 456182fffe4805798b77187eb6acad5e 151 SUPERFAMILY SSF55811 7 121 5.28E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_019055 456182fffe4805798b77187eb6acad5e 151 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABE28_014730 65feaca2c632617b4ddf2b9c31eb2e56 322 SMART SM00849 21 234 2.7E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_014730 65feaca2c632617b4ddf2b9c31eb2e56 322 Pfam PF00753 Metallo-beta-lactamase superfamily 20 234 2.1E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_014730 65feaca2c632617b4ddf2b9c31eb2e56 322 SUPERFAMILY SSF56281 2 309 2.92E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014730 65feaca2c632617b4ddf2b9c31eb2e56 322 Gene3D G3DSA:3.60.15.10 5 262 1.2E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_011005 6d4b5e2d46f9043af9c6f66dfe276488 509 SUPERFAMILY SSF52096 4 247 1.42E-66 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_011005 6d4b5e2d46f9043af9c6f66dfe276488 509 SUPERFAMILY SSF52096 211 489 2.91E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_011005 6d4b5e2d46f9043af9c6f66dfe276488 509 Gene3D G3DSA:3.90.226.10 246 508 2.8E-82 T 11-10-2018 ABE28_011005 6d4b5e2d46f9043af9c6f66dfe276488 509 Pfam PF01039 Carboxyl transferase domain 26 506 2.6E-162 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 ABE28_011005 6d4b5e2d46f9043af9c6f66dfe276488 509 Gene3D G3DSA:3.90.226.10 2 245 1.7E-78 T 11-10-2018 ABE28_002430 32749562f271d1ce251b8d5b9812188c 216 Gene3D G3DSA:2.20.25.10 179 216 8.6E-20 T 11-10-2018 ABE28_002430 32749562f271d1ce251b8d5b9812188c 216 Pfam PF04397 LytTr DNA-binding domain 119 214 3.4E-26 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_002430 32749562f271d1ce251b8d5b9812188c 216 Gene3D G3DSA:2.40.50.40 108 178 2.3E-25 T 11-10-2018 ABE28_002430 32749562f271d1ce251b8d5b9812188c 216 SMART SM00850 118 215 1.2E-30 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 Gene3D G3DSA:3.10.310.30 319 444 1.2E-34 T 11-10-2018 ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 569 771 5.9E-60 T 11-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 563 5.5E-176 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 Gene3D G3DSA:3.90.1640.30 57 318 3.0E-92 T 11-10-2018 ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 SUPERFAMILY SSF64182 57 452 5.49E-121 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 Pfam PF02272 DHHA1 domain 308 439 4.9E-20 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_016170 71ce4cd22cd59194ff863269841d1e5d 790 Pfam PF01368 DHH family 82 225 6.5E-9 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 TIGRFAM TIGR00105 L31: ribosomal protein bL31 2 81 5.2E-20 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 Gene3D G3DSA:2.30.170.50 1 82 3.4E-24 T 11-10-2018 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.357 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 PRINTS PR01249 Ribosomal protein L31 signature 2 19 7.4E-19 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 PRINTS PR01249 Ribosomal protein L31 signature 60 78 7.4E-19 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 PRINTS PR01249 Ribosomal protein L31 signature 45 60 7.4E-19 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 Pfam PF01197 Ribosomal protein L31 2 79 5.2E-27 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_005505 500ab8c5d6864762697e26f2b7b70d9d 82 SUPERFAMILY SSF143800 2 80 9.02E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 SUPERFAMILY SSF117457 332 503 4.97E-53 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 Pfam PF05683 Fumarase C-terminus 295 504 2.4E-62 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 341 503 5.8E-53 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 7 282 3.8E-60 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 Pfam PF05681 Fumarate hydratase (Fumerase) 8 284 1.0E-69 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 PIRSF PIRSF001394 1 521 2.4E-189 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 ABE28_002755 73faad532ae454f4781fe6683e047d79 522 Gene3D G3DSA:3.20.130.10 320 504 6.1E-67 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 ABE28_018475 bd8a0b0e03304cb0f7f705ab7f7d673c 189 Pfam PF13302 Acetyltransferase (GNAT) domain 11 152 6.4E-25 T 11-10-2018 IPR000182 GNAT domain ABE28_018475 bd8a0b0e03304cb0f7f705ab7f7d673c 189 SUPERFAMILY SSF55729 6 176 1.98E-45 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_018475 bd8a0b0e03304cb0f7f705ab7f7d673c 189 Gene3D G3DSA:3.40.630.30 2 179 2.4E-48 T 11-10-2018 ABE28_004640 31be790d4976b3f76aca1f51fee61493 228 Pfam PF02706 Chain length determinant protein 3 90 6.1E-11 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 ABE28_023935 f18537d9e2b7dcfbb7b551c36bdd8619 173 Gene3D G3DSA:2.40.50.140 91 172 1.1E-30 T 11-10-2018 ABE28_012910 f18537d9e2b7dcfbb7b551c36bdd8619 173 Gene3D G3DSA:2.40.50.140 91 172 1.1E-30 T 11-10-2018 ABE28_004025 55e79971c1052a76628bbd2f3cb013b1 173 Gene3D G3DSA:3.40.50.300 1 168 1.9E-11 T 11-10-2018 ABE28_004025 55e79971c1052a76628bbd2f3cb013b1 173 SUPERFAMILY SSF52540 4 112 1.1E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 Gene3D G3DSA:1.10.1040.10 170 293 1.5E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 290 1.9E-58 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 173 288 5.3E-25 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 Gene3D G3DSA:3.40.50.720 1 168 4.1E-50 T 11-10-2018 ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 SUPERFAMILY SSF48179 171 290 1.22E-20 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 147 5.5E-22 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ABE28_007460 63f74300b7bbb26c5451643327d073dc 294 SUPERFAMILY SSF51735 1 160 4.68E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010385 3e8896b678f1a838b8d7fe26a35584c7 470 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_010385 3e8896b678f1a838b8d7fe26a35584c7 470 PIRSF PIRSF006060 2 468 1.6E-74 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_010385 3e8896b678f1a838b8d7fe26a35584c7 470 Gene3D G3DSA:1.20.1740.10 9 467 3.0E-70 T 11-10-2018 ABE28_010385 3e8896b678f1a838b8d7fe26a35584c7 470 Pfam PF00324 Amino acid permease 16 446 1.7E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_003025 0db3e56d6e6ea68f4c8d7d168bcb301f 169 SUPERFAMILY SSF55729 6 154 9.47E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003025 0db3e56d6e6ea68f4c8d7d168bcb301f 169 Pfam PF00583 Acetyltransferase (GNAT) family 19 147 3.1E-13 T 11-10-2018 IPR000182 GNAT domain ABE28_003025 0db3e56d6e6ea68f4c8d7d168bcb301f 169 Gene3D G3DSA:3.40.630.30 4 166 9.9E-26 T 11-10-2018 ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 235 255 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 1.2E-27 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 4.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 4.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 4.2E-8 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 SUPERFAMILY SSF51735 10 274 4.24E-63 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 Gene3D G3DSA:3.40.50.720 3 278 2.0E-72 T 11-10-2018 ABE28_012495 4c083950b8b7f5cf34e38e4748437cbc 278 Pfam PF00106 short chain dehydrogenase 12 215 2.3E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_017610 846e8abc039149e4c5fa48103f598595 354 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 37.145 T 11-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 297 6.2E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 2.5E-16 T 11-10-2018 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 2.5E-16 T 11-10-2018 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 2.5E-16 T 11-10-2018 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 2.5E-16 T 11-10-2018 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 2.5E-16 T 11-10-2018 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 SUPERFAMILY SSF51905 1 319 5.96E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 8.5E-23 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 8.5E-23 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 8.5E-23 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 8.5E-23 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 8.5E-23 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_017610 846e8abc039149e4c5fa48103f598595 354 Gene3D G3DSA:3.50.50.60 127 248 2.3E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017610 846e8abc039149e4c5fa48103f598595 354 Gene3D G3DSA:3.50.50.60 7 309 2.3E-82 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009395 1c1989023434b9521f17a7e8e8cc2ec2 104 SUPERFAMILY SSF89957 1 103 9.94E-33 T 11-10-2018 IPR029756 MTH1187/YkoF-like ABE28_009395 1c1989023434b9521f17a7e8e8cc2ec2 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 5.1E-36 T 11-10-2018 IPR002767 Thiamine-binding protein ABE28_009395 1c1989023434b9521f17a7e8e8cc2ec2 104 Gene3D G3DSA:3.30.70.930 1 104 1.3E-38 T 11-10-2018 IPR029756 MTH1187/YkoF-like ABE28_009395 1c1989023434b9521f17a7e8e8cc2ec2 104 Pfam PF01910 Thiamine-binding protein 4 99 9.7E-35 T 11-10-2018 IPR002767 Thiamine-binding protein ABE28_014690 9202cc503eccbfbfcf735a9ebae0f001 303 Pfam PF12146 Serine aminopeptidase, S33 81 192 7.0E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 ABE28_014690 9202cc503eccbfbfcf735a9ebae0f001 303 Gene3D G3DSA:3.40.50.1820 57 303 1.2E-45 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_014690 9202cc503eccbfbfcf735a9ebae0f001 303 SUPERFAMILY SSF53474 40 301 2.13E-46 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_012770 f0342ce93e72387d8068c407575885a5 143 Pfam PF00571 CBS domain 69 118 6.9E-9 T 11-10-2018 IPR000644 CBS domain ABE28_012770 f0342ce93e72387d8068c407575885a5 143 Pfam PF00571 CBS domain 5 54 1.4E-12 T 11-10-2018 IPR000644 CBS domain ABE28_012770 f0342ce93e72387d8068c407575885a5 143 SMART SM00116 11 58 7.1E-6 T 11-10-2018 IPR000644 CBS domain ABE28_012770 f0342ce93e72387d8068c407575885a5 143 SMART SM00116 75 122 4.7E-7 T 11-10-2018 IPR000644 CBS domain ABE28_012770 f0342ce93e72387d8068c407575885a5 143 SUPERFAMILY SSF54631 3 117 2.27E-31 T 11-10-2018 ABE28_012770 f0342ce93e72387d8068c407575885a5 143 Gene3D G3DSA:3.10.580.10 1 123 4.8E-34 T 11-10-2018 ABE28_023565 c3bf891e1aa04f78e1a27ce84997b187 442 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 7 345 8.1E-122 T 11-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase ABE28_023565 c3bf891e1aa04f78e1a27ce84997b187 442 SUPERFAMILY SSF51905 5 274 2.71E-18 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_023565 c3bf891e1aa04f78e1a27ce84997b187 442 Gene3D G3DSA:3.50.50.60 1 427 2.6E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 111 8.5E-50 T 11-10-2018 IPR004624 PhnA protein ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 Gene3D G3DSA:2.20.25.10 1 42 2.9E-20 T 11-10-2018 ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 SUPERFAMILY SSF82057 41 112 3.8E-29 T 11-10-2018 ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 SUPERFAMILY SSF57783 3 36 3.91E-14 T 11-10-2018 ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 Pfam PF08274 PhnA Zinc-Ribbon 4 32 2.1E-16 T 11-10-2018 IPR013987 PhnA protein, N-terminal ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 Gene3D G3DSA:2.30.30.40 43 112 1.0E-35 T 11-10-2018 ABE28_017580 c7728520421b39db1fe8f88bcef0a98c 112 Pfam PF03831 PhnA domain 45 112 2.3E-34 T 11-10-2018 IPR013988 PhnA protein, C-terminal ABE28_015305 5c07f999134aa5ab6c052e48d2511466 277 Pfam PF00950 ABC 3 transport family 7 271 1.3E-67 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 ABE28_015305 5c07f999134aa5ab6c052e48d2511466 277 SUPERFAMILY SSF81345 6 268 7.19E-39 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_015305 5c07f999134aa5ab6c052e48d2511466 277 Gene3D G3DSA:1.10.3470.10 73 275 1.9E-10 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_020135 3cad12c593be86518c5a036dba3f4672 203 Pfam PF04892 VanZ like family 79 189 4.6E-17 T 11-10-2018 IPR006976 VanZ-like ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 Pfam PF01476 LysM domain 27 69 1.2E-11 T 11-10-2018 IPR018392 LysM domain ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 Pfam PF07486 Cell Wall Hydrolase 90 187 1.8E-25 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 SUPERFAMILY SSF54106 26 69 2.88E-9 T 11-10-2018 ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 SMART SM00257 26 69 1.6E-10 T 11-10-2018 IPR018392 LysM domain ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 Gene3D G3DSA:3.10.350.10 13 76 2.0E-13 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 Gene3D G3DSA:1.10.10.2520 77 154 1.6E-29 T 11-10-2018 ABE28_012935 27ac46fd1f89cc06ff56529d898436fd 189 Gene3D G3DSA:2.40.10.420 156 188 2.6E-10 T 11-10-2018 ABE28_022750 c00f4202aec653359aa85b4ff034fb6f 339 Pfam PF08486 Stage II sporulation protein 62 166 1.7E-27 T 11-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal ABE28_022750 c00f4202aec653359aa85b4ff034fb6f 339 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 2 327 8.5E-126 T 11-10-2018 IPR014225 Sporulation stage II, protein D firmicutes ABE28_022750 c00f4202aec653359aa85b4ff034fb6f 339 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 66 326 8.9E-75 T 11-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 ABE28_010320 d376d77f9473a509e9a2d7dbd8c19143 179 SUPERFAMILY SSF46785 4 124 3.87E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010320 d376d77f9473a509e9a2d7dbd8c19143 179 Gene3D G3DSA:1.10.10.10 1 82 1.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010320 d376d77f9473a509e9a2d7dbd8c19143 179 Pfam PF12840 Helix-turn-helix domain 5 64 4.6E-10 T 11-10-2018 ABE28_010320 d376d77f9473a509e9a2d7dbd8c19143 179 Gene3D G3DSA:1.20.1270.400 87 178 6.3E-8 T 11-10-2018 ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 Gene3D G3DSA:3.40.710.10 260 664 1.0E-114 T 11-10-2018 ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 SUPERFAMILY SSF56601 219 661 1.09E-115 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 SUPERFAMILY SSF53955 50 259 6.47E-74 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 Gene3D G3DSA:1.10.3810.10 64 259 8.3E-75 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 Pfam PF00912 Transglycosylase 62 237 6.1E-64 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 Pfam PF00905 Penicillin binding protein transpeptidase domain 328 597 2.8E-35 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_023060 1d59e6438b6f74421c6923d90fff9df0 689 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 608 2.3E-179 T 11-10-2018 ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 Gene3D G3DSA:3.40.50.300 1 304 5.7E-87 T 11-10-2018 ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 SMART SM00382 39 239 1.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 SUPERFAMILY SSF52540 3 253 1.73E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 Pfam PF00005 ABC transporter 31 181 1.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_006675 a03e85be2cca9dcbd1122a8762cb6ac1 308 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 273 3.0E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 4.7E-64 T 11-10-2018 ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 SUPERFAMILY SSF51735 44 287 3.51E-85 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 Gene3D G3DSA:3.40.50.720 2 286 1.2E-94 T 11-10-2018 ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 6.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 6.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 6.8E-10 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 4.0E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_005960 0c33eb321330c1ff3d08991d068fe6c6 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_010755 d6333e31e30ff7707bf1f846e60d3985 196 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 1.1E-65 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABE28_010755 d6333e31e30ff7707bf1f846e60d3985 196 SMART SM01207 8 186 3.4E-82 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABE28_010755 d6333e31e30ff7707bf1f846e60d3985 196 Pfam PF02660 Glycerol-3-phosphate acyltransferase 10 185 3.5E-52 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABE28_010755 d6333e31e30ff7707bf1f846e60d3985 196 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 194 20.172 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 ABE28_013955 cd1416c2beaac7b1d709a4ec15f5f40c 637 Gene3D G3DSA:3.40.50.300 36 317 9.7E-29 T 11-10-2018 ABE28_013955 cd1416c2beaac7b1d709a4ec15f5f40c 637 SMART SM00491 493 623 6.2E-10 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ABE28_013955 cd1416c2beaac7b1d709a4ec15f5f40c 637 Pfam PF13307 Helicase C-terminal domain 484 633 8.1E-23 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 ABE28_013955 cd1416c2beaac7b1d709a4ec15f5f40c 637 SUPERFAMILY SSF52540 51 620 3.1E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_013955 cd1416c2beaac7b1d709a4ec15f5f40c 637 Gene3D G3DSA:3.40.50.300 471 632 2.1E-23 T 11-10-2018 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 Pfam PF00246 Zinc carboxypeptidase 115 360 8.5E-25 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 SMART SM00631 102 376 9.2E-14 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 SUPERFAMILY SSF53187 98 384 1.23E-52 T 11-10-2018 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 Gene3D G3DSA:3.40.630.10 98 388 1.1E-48 T 11-10-2018 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 145 159 4.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 241 249 4.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_015180 fb1d1949f8df1b0cc6b90a1fd4b325cf 388 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 126 138 4.1E-5 T 11-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 ABE28_021525 735662bf9e387db02e293b9ba68091a4 249 Gene3D G3DSA:3.40.50.10990 65 220 7.6E-53 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABE28_021525 735662bf9e387db02e293b9ba68091a4 249 SUPERFAMILY SSF142695 75 219 3.27E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABE28_021525 735662bf9e387db02e293b9ba68091a4 249 Pfam PF00925 GTP cyclohydrolase II 75 216 1.3E-46 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 ABE28_022340 3ee4f10613c5e30dff65b4c35832ceb7 329 Gene3D G3DSA:3.40.50.1980 39 146 1.6E-33 T 11-10-2018 ABE28_022340 3ee4f10613c5e30dff65b4c35832ceb7 329 SUPERFAMILY SSF53807 44 322 1.12E-66 T 11-10-2018 ABE28_022340 3ee4f10613c5e30dff65b4c35832ceb7 329 Pfam PF01497 Periplasmic binding protein 61 298 9.3E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_022340 3ee4f10613c5e30dff65b4c35832ceb7 329 Gene3D G3DSA:3.40.50.1980 148 329 1.5E-59 T 11-10-2018 ABE28_023795 d3102f73843eb45f3c6cc8a3703b6fde 262 PRINTS PR01900 YidC translocation/secretion protein signature 200 224 2.0E-5 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABE28_023795 d3102f73843eb45f3c6cc8a3703b6fde 262 PRINTS PR01900 YidC translocation/secretion protein signature 175 190 2.0E-5 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABE28_023795 d3102f73843eb45f3c6cc8a3703b6fde 262 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 58 244 1.6E-67 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_023795 d3102f73843eb45f3c6cc8a3703b6fde 262 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 249 32.649 T 11-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 ABE28_023795 d3102f73843eb45f3c6cc8a3703b6fde 262 Pfam PF02096 60Kd inner membrane protein 59 244 3.6E-62 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 ABE28_005280 61f76674a9f4ab1f6b641df325b02aba 187 Gene3D G3DSA:1.20.144.10 85 175 3.7E-18 T 11-10-2018 ABE28_005280 61f76674a9f4ab1f6b641df325b02aba 187 Pfam PF01569 PAP2 superfamily 54 162 2.6E-18 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_005280 61f76674a9f4ab1f6b641df325b02aba 187 SMART SM00014 52 160 2.4E-28 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase ABE28_005280 61f76674a9f4ab1f6b641df325b02aba 187 SUPERFAMILY SSF48317 2 167 2.22E-37 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 Gene3D G3DSA:1.20.1250.20 14 405 8.5E-68 T 11-10-2018 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 SUPERFAMILY SSF103473 14 403 2.62E-64 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 91 115 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 265 285 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 176 196 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 30 46 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 60 79 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 118 139 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 148 170 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 PRINTS PR01035 Tetracycline resistance protein signature 357 380 2.2E-40 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 ABE28_010260 f929f878310e116e3f6aa7f1c33574f5 411 Pfam PF07690 Major Facilitator Superfamily 25 238 4.2E-34 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 SUPERFAMILY SSF53955 1414 1512 2.44E-6 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 Pfam PF10145 Phage-related minor tail protein 321 584 4.2E-49 T 11-10-2018 IPR010090 Phage tail tape measure protein ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 281 487 1.9E-38 T 11-10-2018 IPR010090 Phage tail tape measure protein ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 545 689 6.9E-18 T 11-10-2018 IPR010090 Phage tail tape measure protein ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 SUPERFAMILY SSF57997 163 256 3.17E-5 T 11-10-2018 ABE28_003235 e1eb030eeee3ed7162493a59acbd0bd8 1645 Pfam PF01464 Transglycosylase SLT domain 1442 1539 1.1E-4 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 Hamap MF_00158 Pantothenate synthetase [panC]. 2 279 37.196 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 Gene3D G3DSA:3.40.50.620 2 177 1.7E-69 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 SUPERFAMILY SSF52374 1 280 8.45E-100 T 11-10-2018 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 Gene3D G3DSA:3.30.1300.10 178 277 2.6E-31 T 11-10-2018 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 1.6E-96 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.1E-105 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 ABE28_014135 c9f2b4b24e331c6131e2ada0971d92f2 282 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 74 3.5E-7 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 ABE28_005215 b62d6021d0a878db59f654dbd97eef46 350 SUPERFAMILY SSF47240 25 350 1.71E-78 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_005215 b62d6021d0a878db59f654dbd97eef46 350 Pfam PF00268 Ribonucleotide reductase, small chain 33 311 1.4E-70 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_005215 b62d6021d0a878db59f654dbd97eef46 350 Gene3D G3DSA:1.10.620.20 7 340 1.1E-85 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ABE28_005215 b62d6021d0a878db59f654dbd97eef46 350 PIRSF PIRSF000355 1 350 6.3E-94 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_003765 8fdcee3ad032cbf6dc3a2f7dee4261eb 276 Gene3D G3DSA:1.10.3720.10 74 265 4.8E-24 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003765 8fdcee3ad032cbf6dc3a2f7dee4261eb 276 SUPERFAMILY SSF161098 74 254 7.06E-32 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003765 8fdcee3ad032cbf6dc3a2f7dee4261eb 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 266 4.6E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_005535 3dd4736ccf9bda7fcb979b29fc917b34 295 SUPERFAMILY SSF46689 226 270 2.02E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_005535 3dd4736ccf9bda7fcb979b29fc917b34 295 Gene3D G3DSA:1.10.10.2840 172 295 9.3E-19 T 11-10-2018 ABE28_005535 3dd4736ccf9bda7fcb979b29fc917b34 295 Pfam PF13556 PucR C-terminal helix-turn-helix domain 235 291 1.4E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 144 160 4.8E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 160 175 4.8E-6 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 Gene3D G3DSA:1.10.10.10 115 202 1.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 SMART SM00419 138 186 5.2E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 Pfam PF13545 Crp-like helix-turn-helix domain 123 192 4.5E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 SUPERFAMILY SSF46785 118 203 1.68E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 Pfam PF00027 Cyclic nucleotide-binding domain 2 86 3.1E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 SUPERFAMILY SSF51206 2 115 1.02E-23 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like ABE28_006015 e42e38244f8b150ca1683fdb25671ab9 207 Gene3D G3DSA:2.60.120.10 1 114 1.1E-25 T 11-10-2018 IPR014710 RmlC-like jelly roll fold ABE28_001895 84901de5992474c240e9769f00de773c 430 Gene3D G3DSA:1.10.40.30 349 430 2.1E-35 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 SMART SM00998 349 429 4.5E-40 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001895 84901de5992474c240e9769f00de773c 430 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 ABE28_001895 84901de5992474c240e9769f00de773c 430 Gene3D G3DSA:1.10.275.10 1 92 7.9E-39 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 5.3E-9 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 5.3E-9 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 5.3E-9 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 5.3E-9 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 SUPERFAMILY SSF48557 3 427 2.98E-141 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 ABE28_001895 84901de5992474c240e9769f00de773c 430 Gene3D G3DSA:1.20.200.10 93 348 4.1E-104 T 11-10-2018 ABE28_001895 84901de5992474c240e9769f00de773c 430 Pfam PF00206 Lyase 6 286 2.0E-78 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal ABE28_001895 84901de5992474c240e9769f00de773c 430 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 3.1E-26 T 11-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 4.0E-26 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 4.0E-26 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 4.0E-26 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_001895 84901de5992474c240e9769f00de773c 430 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 4.0E-26 T 11-10-2018 IPR000362 Fumarate lyase family ABE28_001895 84901de5992474c240e9769f00de773c 430 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.3E-183 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 SUPERFAMILY SSF144052 4 409 6.93E-152 T 11-10-2018 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 2.3E-73 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 Gene3D G3DSA:3.40.1830.10 1 180 4.4E-70 T 11-10-2018 IPR035097 Peptidase M29, N-terminal ABE28_006585 db5c440f159a9040bb7473fdbc341a9f 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 5.8E-179 T 11-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 ABE28_003785 e9e79c2dc9c7b23fa4898a57ffd9cfeb 320 Gene3D G3DSA:2.40.128.540 180 320 3.6E-62 T 11-10-2018 ABE28_003785 e9e79c2dc9c7b23fa4898a57ffd9cfeb 320 Gene3D G3DSA:2.40.128.540 48 179 5.0E-57 T 11-10-2018 ABE28_003785 e9e79c2dc9c7b23fa4898a57ffd9cfeb 320 Pfam PF16103 Domain of unknown function (DUF4822) 56 175 2.7E-52 T 11-10-2018 IPR032247 Domain of unknown function DUF4822 ABE28_003785 e9e79c2dc9c7b23fa4898a57ffd9cfeb 320 Pfam PF16103 Domain of unknown function (DUF4822) 196 318 1.4E-52 T 11-10-2018 IPR032247 Domain of unknown function DUF4822 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 SUPERFAMILY SSF53187 3 376 5.78E-49 T 11-10-2018 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 Pfam PF01546 Peptidase family M20/M25/M40 76 373 4.6E-26 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 Gene3D G3DSA:3.40.630.10 15 364 1.5E-120 T 11-10-2018 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 PIRSF PIRSF037238 2 376 7.1E-134 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 Gene3D G3DSA:3.30.70.360 180 289 1.5E-120 T 11-10-2018 ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 Pfam PF07687 Peptidase dimerisation domain 177 276 1.7E-18 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_016125 0fb2ef3f5d34611fb36452599ecc3008 385 SUPERFAMILY SSF55031 180 288 8.07E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_018995 16a3b01829fead122b7c05088fd973c6 127 Pfam PF08818 Domain of unknown function (DU1801) 22 111 1.4E-14 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 ABE28_018995 16a3b01829fead122b7c05088fd973c6 127 SUPERFAMILY SSF159888 7 119 7.72E-37 T 11-10-2018 ABE28_018995 16a3b01829fead122b7c05088fd973c6 127 Gene3D G3DSA:1.10.10.810 5 116 3.0E-34 T 11-10-2018 ABE28_023825 1b9abcf72264de692b93c5f6e68e6453 89 Pfam PF04025 Domain of unknown function (DUF370) 3 73 1.2E-9 T 11-10-2018 IPR007169 Extracellular matrix regulatory protein A ABE28_004795 d622938bb05baec07bd22a37b0c3e1af 273 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 10 265 3.0E-81 T 11-10-2018 ABE28_004795 d622938bb05baec07bd22a37b0c3e1af 273 Pfam PF12787 EcsC protein family 10 262 4.5E-75 T 11-10-2018 IPR024787 EcsC protein ABE28_000910 c3bfba0ac9ec779b9a03a373b617ba9f 292 Pfam PF02517 CAAX protease self-immunity 124 209 4.6E-16 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ABE28_010995 5476b3cfc03c71b3174c5188e52adb18 299 Pfam PF00682 HMGL-like 6 277 1.3E-49 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 ABE28_010995 5476b3cfc03c71b3174c5188e52adb18 299 SUPERFAMILY SSF51569 2 297 1.68E-69 T 11-10-2018 ABE28_010995 5476b3cfc03c71b3174c5188e52adb18 299 Gene3D G3DSA:3.20.20.70 1 299 6.9E-125 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_008960 c5279e0c88a89e5efe57117d00232fe9 340 Gene3D G3DSA:3.30.1930.10 153 273 1.6E-15 T 11-10-2018 ABE28_008960 c5279e0c88a89e5efe57117d00232fe9 340 Gene3D G3DSA:3.15.30.10 37 280 1.6E-15 T 11-10-2018 ABE28_008960 c5279e0c88a89e5efe57117d00232fe9 340 Pfam PF03864 Phage major capsid protein E 8 338 5.2E-48 T 11-10-2018 IPR005564 Major capsid protein GpE ABE28_006650 ec79ce8a2ecc5e78e1683ab052f0be73 160 SUPERFAMILY SSF109854 5 159 2.75E-25 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_006650 ec79ce8a2ecc5e78e1683ab052f0be73 160 Pfam PF12867 DinB superfamily 5 153 1.4E-22 T 11-10-2018 IPR024775 DinB-like domain ABE28_006650 ec79ce8a2ecc5e78e1683ab052f0be73 160 Gene3D G3DSA:1.20.120.450 2 159 9.8E-41 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_006290 d0072838551c6e02282a42457730f431 142 SUPERFAMILY SSF55729 3 141 1.56E-37 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_006290 d0072838551c6e02282a42457730f431 142 Pfam PF13673 Acetyltransferase (GNAT) domain 15 140 5.7E-19 T 11-10-2018 IPR000182 GNAT domain ABE28_006290 d0072838551c6e02282a42457730f431 142 Gene3D G3DSA:3.40.630.30 1 140 6.9E-41 T 11-10-2018 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 63 469 6.9E-118 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 37 489 9.1E-132 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 Gene3D G3DSA:3.50.80.20 105 188 5.9E-19 T 11-10-2018 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 Gene3D G3DSA:3.40.710.10 281 490 1.4E-57 T 11-10-2018 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 76 95 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 307 329 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 364 378 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 379 393 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 446 459 3.5E-31 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 Gene3D G3DSA:3.40.710.10 38 104 5.6E-7 T 11-10-2018 ABE28_002490 d1608971cdaa3b6dc9580a093d6fd0ab 498 SUPERFAMILY SSF56601 45 489 8.32E-93 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 Gene3D G3DSA:3.90.340.10 4 351 4.4E-153 T 11-10-2018 ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 Gene3D G3DSA:3.90.440.10 80 189 4.4E-153 T 11-10-2018 ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 PIRSF PIRSF037219 1 359 2.9E-180 T 11-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 Gene3D G3DSA:3.90.1230.10 190 296 4.4E-153 T 11-10-2018 ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 Pfam PF02898 Nitric oxide synthase, oxygenase domain 3 359 6.8E-171 T 11-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 ABE28_012715 03c79f24695e54249f937b5bea88e08b 359 SUPERFAMILY SSF56512 3 358 1.83E-166 T 11-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 ABE28_011540 c0952806f014782e55b3629d5498e5cc 161 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 21 148 2.1E-29 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ ABE28_018430 9b30ec3bd352f7efc59eac110ac292b2 228 Pfam PF03575 Peptidase family S51 6 192 1.7E-22 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_018430 9b30ec3bd352f7efc59eac110ac292b2 228 SUPERFAMILY SSF52317 4 203 5.72E-17 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_018430 9b30ec3bd352f7efc59eac110ac292b2 228 Gene3D G3DSA:3.40.50.880 3 211 9.9E-33 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_009640 6c6268775cef9b7f93bf3f0e3cc1a5d5 119 Pfam PF13027 Protein of unknown function (DUF3888) 32 116 2.4E-20 T 11-10-2018 IPR024984 Protein of unknown function DUF3888 ABE28_021010 0a5c7872cbc2e99623def48bcb576aaf 235 SUPERFAMILY SSF56281 13 223 4.46E-37 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_021010 0a5c7872cbc2e99623def48bcb576aaf 235 SMART SM00849 20 212 4.2E-25 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_021010 0a5c7872cbc2e99623def48bcb576aaf 235 Gene3D G3DSA:3.60.15.10 4 234 3.6E-35 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_021010 0a5c7872cbc2e99623def48bcb576aaf 235 Pfam PF00753 Metallo-beta-lactamase superfamily 18 212 4.4E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_000880 a3b2f6d53e6fa47b41dc2eabc353889a 207 Pfam PF13490 Putative zinc-finger 3 38 1.7E-8 T 11-10-2018 IPR027383 Putative zinc-finger ABE28_000880 a3b2f6d53e6fa47b41dc2eabc353889a 207 Gene3D G3DSA:1.10.10.1320 3 94 1.2E-7 T 11-10-2018 ABE28_023655 c62eccbcf0dfd5f36b69c92dcaec60bd 445 Pfam PF07435 YycH protein 4 434 2.3E-101 T 11-10-2018 IPR009996 Regulatory protein YycH ABE28_023655 c62eccbcf0dfd5f36b69c92dcaec60bd 445 Gene3D G3DSA:3.10.450.310 203 405 1.5E-52 T 11-10-2018 ABE28_023655 c62eccbcf0dfd5f36b69c92dcaec60bd 445 Gene3D G3DSA:3.30.310.160 223 364 1.5E-52 T 11-10-2018 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 SUPERFAMILY SSF51905 8 351 6.64E-60 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 8 30 3.4E-15 T 11-10-2018 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 284 299 3.4E-15 T 11-10-2018 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 299 315 3.4E-15 T 11-10-2018 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 3.4E-15 T 11-10-2018 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 Pfam PF01494 FAD binding domain 9 341 8.9E-28 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 ABE28_008540 6ac0a94be024a3214bf8a8d6ef885bc9 365 Gene3D G3DSA:3.50.50.60 8 361 1.9E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_011200 90cabfeb0019118b87d513ad50ec1a82 147 SUPERFAMILY SSF53098 47 146 6.22E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_011200 90cabfeb0019118b87d513ad50ec1a82 147 Pfam PF00665 Integrase core domain 55 144 3.0E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 ABE28_011200 90cabfeb0019118b87d513ad50ec1a82 147 Gene3D G3DSA:3.30.420.10 55 147 2.1E-6 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_022550 88b94e30b43f9ba837063effce52fe4f 396 SUPERFAMILY SSF53756 150 390 1.88E-17 T 11-10-2018 ABE28_022550 88b94e30b43f9ba837063effce52fe4f 396 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 25 391 3.6E-130 T 11-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 ABE28_022550 88b94e30b43f9ba837063effce52fe4f 396 Gene3D G3DSA:3.40.50.11820 28 385 1.9E-146 T 11-10-2018 ABE28_022550 88b94e30b43f9ba837063effce52fe4f 396 Gene3D G3DSA:3.40.50.12580 199 378 1.9E-146 T 11-10-2018 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 Gene3D G3DSA:1.20.1250.20 246 437 5.3E-26 T 11-10-2018 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 SUPERFAMILY SSF103473 12 431 2.09E-77 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 Gene3D G3DSA:1.20.1250.20 14 224 1.4E-43 T 11-10-2018 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 Pfam PF07690 Major Facilitator Superfamily 29 394 9.3E-44 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 2.1E-8 T 11-10-2018 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 173 197 2.1E-8 T 11-10-2018 ABE28_001190 0bebd0d682dc3293f4527e27703bf82d 455 PRINTS PR01036 Tetracycline resistance protein TetB signature 118 138 2.1E-8 T 11-10-2018 ABE28_009515 7f4ef9f5da1179ae2e71a6a2512e9767 159 SUPERFAMILY SSF46785 12 133 1.39E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_009515 7f4ef9f5da1179ae2e71a6a2512e9767 159 Pfam PF02082 Transcriptional regulator 3 83 4.2E-15 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_009515 7f4ef9f5da1179ae2e71a6a2512e9767 159 Gene3D G3DSA:1.10.10.10 1 149 6.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009515 7f4ef9f5da1179ae2e71a6a2512e9767 159 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 3 133 4.7E-23 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_003415 0152be1c001a263cb59a0b42e40974cc 394 Pfam PF07905 Purine catabolism regulatory protein-like family 8 120 1.1E-32 T 11-10-2018 IPR012914 Purine catabolism PurC-like domain ABE28_003415 0152be1c001a263cb59a0b42e40974cc 394 Gene3D G3DSA:1.10.10.2840 263 393 2.5E-19 T 11-10-2018 ABE28_003415 0152be1c001a263cb59a0b42e40974cc 394 Pfam PF13556 PucR C-terminal helix-turn-helix domain 330 388 2.0E-19 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_009835 d0c25c82abbe85149ce19ad6aafa78fa 465 Pfam PF13347 MFS/sugar transport protein 26 446 3.5E-100 T 11-10-2018 ABE28_009835 d0c25c82abbe85149ce19ad6aafa78fa 465 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 24 459 4.1E-151 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ABE28_009835 d0c25c82abbe85149ce19ad6aafa78fa 465 SUPERFAMILY SSF103473 25 444 2.62E-39 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_009835 d0c25c82abbe85149ce19ad6aafa78fa 465 Gene3D G3DSA:1.20.1250.20 32 444 6.4E-24 T 11-10-2018 ABE28_007975 9d10e73fc0edf43e92842988b2df4a23 436 Gene3D G3DSA:3.30.750.140 289 415 1.8E-13 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily ABE28_007975 9d10e73fc0edf43e92842988b2df4a23 436 Pfam PF02120 Flagellar hook-length control protein FliK 313 387 1.7E-16 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal ABE28_011020 111fae42c613211c133873644a6e19bd 489 Gene3D G3DSA:3.20.20.70 153 320 6.9E-204 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_011020 111fae42c613211c133873644a6e19bd 489 PIRSF PIRSF000484 2 482 1.4E-151 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ABE28_011020 111fae42c613211c133873644a6e19bd 489 Gene3D G3DSA:3.20.140.10 12 472 6.9E-204 T 11-10-2018 ABE28_011020 111fae42c613211c133873644a6e19bd 489 SUPERFAMILY SSF51690 141 480 7.95E-131 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 ABE28_011020 111fae42c613211c133873644a6e19bd 489 SUPERFAMILY SSF54675 6 140 1.83E-49 T 11-10-2018 ABE28_011020 111fae42c613211c133873644a6e19bd 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 358 7.5E-10 T 11-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 ABE28_011020 111fae42c613211c133873644a6e19bd 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 467 7.0E-180 T 11-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 ABE28_021885 9805854e01f0dafa096e73719dceb6af 360 Gene3D G3DSA:3.30.300.210 219 360 4.9E-14 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_021885 9805854e01f0dafa096e73719dceb6af 360 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 359 3.3E-72 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_021885 9805854e01f0dafa096e73719dceb6af 360 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 357 5.0E-27 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_020400 0e3e72ebf13b82a8f455a23e75c30ef4 189 Pfam PF01872 RibD C-terminal domain 9 180 3.4E-25 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 ABE28_020400 0e3e72ebf13b82a8f455a23e75c30ef4 189 Gene3D G3DSA:3.40.430.10 8 184 1.2E-53 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_020400 0e3e72ebf13b82a8f455a23e75c30ef4 189 SUPERFAMILY SSF53597 8 185 1.26E-35 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 3 305 2.6E-116 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 133 153 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 SUPERFAMILY SSF51905 1 304 8.1E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009785 9e88cb062693dee741df05d131aadddb 317 Gene3D G3DSA:3.50.50.60 4 304 7.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009785 9e88cb062693dee741df05d131aadddb 317 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 294 5.7E-52 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 104 112 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 57 67 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 126 138 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 36 51 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 193 209 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 233 254 7.2E-73 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 Gene3D G3DSA:3.50.50.60 120 244 7.1E-118 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.3E-37 T 11-10-2018 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 1.3E-37 T 11-10-2018 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 231 247 1.3E-37 T 11-10-2018 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 1.3E-37 T 11-10-2018 ABE28_009785 9e88cb062693dee741df05d131aadddb 317 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.3E-37 T 11-10-2018 ABE28_024000 2bc044a9934122124433e9336f82336c 145 SUPERFAMILY SSF55729 2 137 1.08E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_024000 2bc044a9934122124433e9336f82336c 145 Gene3D G3DSA:3.40.630.30 9 134 1.2E-26 T 11-10-2018 ABE28_024000 2bc044a9934122124433e9336f82336c 145 Pfam PF13673 Acetyltransferase (GNAT) domain 42 135 4.0E-16 T 11-10-2018 IPR000182 GNAT domain ABE28_018375 058de8fa27b32f7966c968bed5dc262e 263 Pfam PF12746 GNAT acetyltransferase 22 259 2.8E-44 T 11-10-2018 IPR027365 GNAT acetyltransferase YdfB-like ABE28_018375 058de8fa27b32f7966c968bed5dc262e 263 Gene3D G3DSA:3.40.630.30 118 250 1.4E-32 T 11-10-2018 ABE28_018375 058de8fa27b32f7966c968bed5dc262e 263 SUPERFAMILY SSF55729 144 252 9.04E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 20 509 9.7E-160 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 Gene3D G3DSA:1.20.1720.10 20 225 1.3E-42 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 SUPERFAMILY SSF103473 11 522 6.8E-73 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 2.4E-11 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 114 134 2.4E-11 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 362 382 2.4E-11 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 308 332 2.4E-11 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 PRINTS PR01036 Tetracycline resistance protein TetB signature 144 168 2.4E-11 T 11-10-2018 ABE28_003680 91fe5ea44f7b2f4b054f099ccd3f0990 539 Pfam PF07690 Major Facilitator Superfamily 24 415 6.7E-52 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_018610 360c934713d327c6c80e5eb42a5081cf 194 SUPERFAMILY SSF50129 16 106 5.73E-18 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_018610 360c934713d327c6c80e5eb42a5081cf 194 Gene3D G3DSA:3.40.50.720 92 143 6.1E-44 T 11-10-2018 ABE28_018610 360c934713d327c6c80e5eb42a5081cf 194 SMART SM00829 1 187 4.8E-4 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_018610 360c934713d327c6c80e5eb42a5081cf 194 Gene3D G3DSA:3.90.180.10 8 91 6.1E-44 T 11-10-2018 ABE28_018610 360c934713d327c6c80e5eb42a5081cf 194 SUPERFAMILY SSF51735 74 143 8.66E-16 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_023265 3f6a1df0dcf5bb83a0ab4dc8ccfab156 348 SUPERFAMILY SSF81345 4 339 7.59E-81 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_023265 3f6a1df0dcf5bb83a0ab4dc8ccfab156 348 Pfam PF01032 FecCD transport family 18 339 3.5E-92 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_023265 3f6a1df0dcf5bb83a0ab4dc8ccfab156 348 Gene3D G3DSA:1.10.3470.10 4 346 1.8E-100 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 42.188 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 SUPERFAMILY SSF51621 6 263 2.63E-104 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 3 263 9.3E-112 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 Gene3D G3DSA:3.20.20.60 4 274 9.2E-113 T 11-10-2018 ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 Pfam PF02548 Ketopantoate hydroxymethyltransferase 6 258 1.2E-109 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABE28_014140 1d4cea8e53b6f2c8c0ed1bb9750f4f66 278 PIRSF PIRSF000388 1 266 2.2E-108 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 ABE28_009950 e0dd49d51eaf491f595c17ce1ceb863b 103 SMART SM00257 39 89 3.0E-4 T 11-10-2018 IPR018392 LysM domain ABE28_009950 e0dd49d51eaf491f595c17ce1ceb863b 103 Gene3D G3DSA:3.10.350.10 30 98 8.7E-11 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_009950 e0dd49d51eaf491f595c17ce1ceb863b 103 SUPERFAMILY SSF54106 39 90 4.71E-6 T 11-10-2018 ABE28_009950 e0dd49d51eaf491f595c17ce1ceb863b 103 Pfam PF01476 LysM domain 41 89 4.1E-9 T 11-10-2018 IPR018392 LysM domain ABE28_018335 97bacd9652eee1fde8771427016c1983 449 Gene3D G3DSA:3.40.50.150 236 449 1.3E-53 T 11-10-2018 ABE28_018335 97bacd9652eee1fde8771427016c1983 449 TIGRFAM TIGR04074 bacter_Hen1: 3' terminal RNA ribose 2'-O-methyltransferase Hen1 3 445 3.4E-108 T 11-10-2018 IPR024026 3'-RNA ribose 2'-O-methyltransferase, Hen1, bacterial ABE28_018335 97bacd9652eee1fde8771427016c1983 449 Gene3D G3DSA:3.30.1610.20 1 228 1.2E-68 T 11-10-2018 IPR038546 Hen1, N-terminal domain superfamily ABE28_018335 97bacd9652eee1fde8771427016c1983 449 SUPERFAMILY SSF53335 254 413 5.23E-10 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_018335 97bacd9652eee1fde8771427016c1983 449 Pfam PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 1 231 2.8E-62 T 11-10-2018 IPR024740 Hen1, N-terminal ABE28_023340 a8f0eb66ada16fb666f042d3bdd2c766 302 SUPERFAMILY SSF56112 20 271 3.84E-30 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_023340 a8f0eb66ada16fb666f042d3bdd2c766 302 Gene3D G3DSA:3.30.200.20 13 103 3.7E-27 T 11-10-2018 ABE28_023340 a8f0eb66ada16fb666f042d3bdd2c766 302 Pfam PF01636 Phosphotransferase enzyme family 31 267 3.5E-28 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_023340 a8f0eb66ada16fb666f042d3bdd2c766 302 Gene3D G3DSA:3.90.1200.10 113 298 2.5E-32 T 11-10-2018 ABE28_008770 5fecd1b92ad3be576bc3e73f829c1b21 126 SMART SM00530 6 61 1.7E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008770 5fecd1b92ad3be576bc3e73f829c1b21 126 Pfam PF01381 Helix-turn-helix 10 61 9.1E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_008770 5fecd1b92ad3be576bc3e73f829c1b21 126 SUPERFAMILY SSF47413 2 68 8.85E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_008770 5fecd1b92ad3be576bc3e73f829c1b21 126 Gene3D G3DSA:1.10.260.40 3 122 1.4E-16 T 11-10-2018 ABE28_012195 54922d7902475ff219950eae0bb6e7f2 150 Gene3D G3DSA:3.30.1330.30 1 134 5.0E-45 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_012195 54922d7902475ff219950eae0bb6e7f2 150 SUPERFAMILY SSF160515 5 123 9.81E-39 T 11-10-2018 ABE28_012195 54922d7902475ff219950eae0bb6e7f2 150 PIRSF PIRSF034303 2 148 5.2E-44 T 11-10-2018 IPR012543 Protein of unknown function DUF1694 ABE28_012195 54922d7902475ff219950eae0bb6e7f2 150 Pfam PF07997 Protein of unknown function (DUF1694) 5 119 1.5E-40 T 11-10-2018 IPR012543 Protein of unknown function DUF1694 ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 Pfam PF01471 Putative peptidoglycan binding domain 189 245 1.2E-16 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 SUPERFAMILY SSF141523 27 150 1.31E-31 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 SUPERFAMILY SSF47090 178 246 2.04E-20 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 Pfam PF03734 L,D-transpeptidase catalytic domain 28 149 4.3E-23 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 Gene3D G3DSA:2.40.440.10 21 151 1.1E-36 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_012200 d105976a680639acb92bd5ae61cb49f4 248 Gene3D G3DSA:1.10.101.10 175 248 2.1E-24 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_011415 a280194c863ec590c288a3f61736f312 215 Pfam PF13702 Lysozyme-like 48 200 1.8E-50 T 11-10-2018 ABE28_011415 a280194c863ec590c288a3f61736f312 215 Gene3D G3DSA:1.10.530.10 46 201 1.5E-48 T 11-10-2018 ABE28_011415 a280194c863ec590c288a3f61736f312 215 SUPERFAMILY SSF53955 51 157 2.33E-11 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily ABE28_019075 53301a45241d071835c8bbe24479f406 193 Gene3D G3DSA:3.40.50.450 1 192 2.3E-76 T 11-10-2018 ABE28_019075 53301a45241d071835c8bbe24479f406 193 SUPERFAMILY SSF102405 3 176 1.51E-58 T 11-10-2018 ABE28_019075 53301a45241d071835c8bbe24479f406 193 Pfam PF03641 Possible lysine decarboxylase 46 174 6.6E-43 T 11-10-2018 IPR031100 LOG family ABE28_019075 53301a45241d071835c8bbe24479f406 193 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 6.7E-59 T 11-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG ABE28_004105 8376aa4eb625c2bef75d38545dd06dd8 465 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 428 5.5E-90 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABE28_004105 8376aa4eb625c2bef75d38545dd06dd8 465 PIRSF PIRSF002744 1 448 9.5E-129 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 ABE28_004105 8376aa4eb625c2bef75d38545dd06dd8 465 Gene3D G3DSA:1.10.4160.10 4 458 3.7E-47 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ABE28_018050 59ff93949790f46d06d05f127accec87 509 Gene3D G3DSA:3.40.190.10 51 257 1.4E-140 T 11-10-2018 ABE28_018050 59ff93949790f46d06d05f127accec87 509 PIRSF PIRSF002741 3 509 3.6E-74 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 ABE28_018050 59ff93949790f46d06d05f127accec87 509 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 75 426 3.7E-72 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain ABE28_018050 59ff93949790f46d06d05f127accec87 509 SUPERFAMILY SSF53850 41 503 3.62E-95 T 11-10-2018 ABE28_018050 59ff93949790f46d06d05f127accec87 509 Gene3D G3DSA:3.10.105.10 258 463 1.4E-140 T 11-10-2018 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 171 189 - T 11-10-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 Pfam PF01270 Glycosyl hydrolases family 8 71 420 3.1E-29 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 SUPERFAMILY SSF48208 40 428 7.94E-87 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 238 255 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 106 119 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 281 292 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 409 423 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 311 320 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 PRINTS PR00735 Glycosyl hydrolase family 8 signature 171 189 1.2E-23 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 ABE28_020285 bca4a4e0bda4e675e563a88a58c4ad11 429 Gene3D G3DSA:1.50.10.10 58 423 3.8E-130 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 ABE28_007395 ca1cf108be5c99ea23d7bcd5fe3e994b 191 PIRSF PIRSF004553 1 184 4.1E-52 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABE28_007395 ca1cf108be5c99ea23d7bcd5fe3e994b 191 Pfam PF03602 Conserved hypothetical protein 95 1 181 1.1E-60 T 11-10-2018 ABE28_007395 ca1cf108be5c99ea23d7bcd5fe3e994b 191 SUPERFAMILY SSF53335 1 181 1.01E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_007395 ca1cf108be5c99ea23d7bcd5fe3e994b 191 Gene3D G3DSA:3.40.50.150 1 182 8.7E-59 T 11-10-2018 ABE28_007395 ca1cf108be5c99ea23d7bcd5fe3e994b 191 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 6.1E-58 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 ABE28_013315 5f0a66746fa7ce0c6975e27597661e5c 163 Pfam PF01625 Peptide methionine sulfoxide reductase 3 141 2.1E-52 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_013315 5f0a66746fa7ce0c6975e27597661e5c 163 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 2 140 6.3E-55 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_013315 5f0a66746fa7ce0c6975e27597661e5c 163 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 147 27.766 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_013315 5f0a66746fa7ce0c6975e27597661e5c 163 Gene3D G3DSA:3.30.1060.10 1 150 1.5E-55 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_013315 5f0a66746fa7ce0c6975e27597661e5c 163 SUPERFAMILY SSF55068 3 152 1.11E-59 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 ABE28_010565 a6466c02703112e22a6b124dc0466803 263 Hamap MF_01830 Putative hydro-lyase . 8 262 53.197 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 ABE28_010565 a6466c02703112e22a6b124dc0466803 263 Gene3D G3DSA:3.40.1640.10 19 250 7.2E-96 T 11-10-2018 ABE28_010565 a6466c02703112e22a6b124dc0466803 263 PIRSF PIRSF029755 1 263 5.6E-124 T 11-10-2018 IPR016938 Uncharacterised protein family UPF0317 ABE28_010565 a6466c02703112e22a6b124dc0466803 263 SUPERFAMILY SSF160920 3 255 5.1E-113 T 11-10-2018 IPR038021 Putative hydro-lyase ABE28_010565 a6466c02703112e22a6b124dc0466803 263 Pfam PF07286 Protein of unknown function (DUF1445) 112 254 1.6E-66 T 11-10-2018 IPR009906 D-glutamate cyclase ABE28_010565 a6466c02703112e22a6b124dc0466803 263 Gene3D G3DSA:3.30.2040.10 122 234 7.2E-96 T 11-10-2018 ABE28_004375 d159fb707e63eed5712f35ea048cf7cf 364 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 10 356 7.7E-53 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_004375 d159fb707e63eed5712f35ea048cf7cf 364 Gene3D G3DSA:1.20.1740.10 6 362 7.4E-10 T 11-10-2018 ABE28_004375 d159fb707e63eed5712f35ea048cf7cf 364 Pfam PF03845 Spore germination protein 10 327 4.4E-77 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 Pfam PF08439 Oligopeptidase F 114 182 1.5E-16 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain ABE28_012145 5dc52837c4af03213c329c8157c204db 598 Gene3D G3DSA:1.10.287.830 180 225 6.1E-15 T 11-10-2018 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 Pfam PF01432 Peptidase family M3 203 583 1.1E-66 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 SUPERFAMILY SSF55486 5 578 1.71E-112 T 11-10-2018 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 594 1.3E-185 T 11-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 Gene3D G3DSA:1.20.140.70 24 178 3.0E-40 T 11-10-2018 ABE28_012145 5dc52837c4af03213c329c8157c204db 598 Gene3D G3DSA:1.10.1370.20 227 598 3.7E-133 T 11-10-2018 ABE28_022390 842d65ed00137133fc26679779d6836a 106 SUPERFAMILY SSF47413 1 65 8.73E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_022390 842d65ed00137133fc26679779d6836a 106 SMART SM00530 5 61 7.7E-16 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_022390 842d65ed00137133fc26679779d6836a 106 SUPERFAMILY SSF47406 71 104 1.57E-12 T 11-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 ABE28_022390 842d65ed00137133fc26679779d6836a 106 Pfam PF08671 Anti-repressor SinI 71 98 2.5E-11 T 11-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 ABE28_022390 842d65ed00137133fc26679779d6836a 106 Pfam PF01381 Helix-turn-helix 6 60 6.6E-17 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_022390 842d65ed00137133fc26679779d6836a 106 Gene3D G3DSA:1.10.260.40 1 106 7.5E-31 T 11-10-2018 ABE28_009880 bc4ba90bc71727ca286fd8146a81cceb 90 Pfam PF00893 Small Multidrug Resistance protein 1 75 3.1E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABE28_009880 bc4ba90bc71727ca286fd8146a81cceb 90 Gene3D G3DSA:1.10.3730.20 1 89 1.7E-30 T 11-10-2018 ABE28_009880 bc4ba90bc71727ca286fd8146a81cceb 90 SUPERFAMILY SSF103481 2 85 4.05E-19 T 11-10-2018 ABE28_018465 c42ce976baefeaa03aa6737cace17c3b 88 Pfam PF14122 YokU-like protein, putative antitoxin 2 79 4.2E-14 T 11-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU ABE28_018465 c42ce976baefeaa03aa6737cace17c3b 88 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 3 45 9.6E-5 T 11-10-2018 IPR022453 Zinc finger, MqsA-type ABE28_002050 d0eb23d45fcc38b2ec8a6ee50ba01f2e 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 5.6E-13 T 11-10-2018 IPR012452 Protein of unknown function DUF1657 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 SUPERFAMILY SSF50249 2 66 3.26E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 PRINTS PR00050 Cold shock protein signature 25 34 5.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 PRINTS PR00050 Cold shock protein signature 40 58 5.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 PRINTS PR00050 Cold shock protein signature 5 20 5.5E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 SMART SM00357 4 67 1.6E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 Gene3D G3DSA:2.40.50.140 2 66 1.6E-29 T 11-10-2018 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 ProSitePatterns PS00352 'Cold-shock' domain signature. 16 34 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.6E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_006765 6db4e1a0c3641c95ee65a848c1c7409a 67 PIRSF PIRSF002599 1 67 8.0E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 SMART SM00382 28 224 3.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 Gene3D G3DSA:3.40.50.300 1 263 2.7E-77 T 11-10-2018 ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 SUPERFAMILY SSF52540 4 246 2.1E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 226 258 9.4E-7 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 Pfam PF00005 ABC transporter 19 174 4.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018035 bd4ac4b5176641bf5eeae71bb480d3a5 265 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 SUPERFAMILY SSF46992 3 86 1.29E-27 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 68 6.0E-9 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.4E-26 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 Pfam PF01649 Ribosomal protein S20 2 84 4.0E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.519 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_015550 23d63cd1caff6034a7773a062aa0216c 88 Gene3D G3DSA:1.20.58.110 1 87 7.3E-28 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_012485 48bc8ce5a6e46bda6c0d84998378971c 413 PIRSF PIRSF002808 1 411 7.4E-34 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 ABE28_012485 48bc8ce5a6e46bda6c0d84998378971c 413 Gene3D G3DSA:1.20.1250.20 210 409 1.2E-29 T 11-10-2018 ABE28_012485 48bc8ce5a6e46bda6c0d84998378971c 413 Pfam PF07690 Major Facilitator Superfamily 13 371 8.7E-56 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_012485 48bc8ce5a6e46bda6c0d84998378971c 413 SUPERFAMILY SSF103473 6 409 3.79E-80 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_012485 48bc8ce5a6e46bda6c0d84998378971c 413 Gene3D G3DSA:1.20.1250.20 2 194 2.9E-48 T 11-10-2018 ABE28_010015 841d171a2091868cb15f593fd561caa5 86 Pfam PF13799 Domain of unknown function (DUF4183) 15 82 1.0E-20 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 ABE28_008345 6beab40e7b4080b26cb542df4a28db67 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 7.2E-40 T 11-10-2018 IPR007347 Sporulation stage V, protein S ABE28_008345 6beab40e7b4080b26cb542df4a28db67 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 6.0E-32 T 11-10-2018 IPR007347 Sporulation stage V, protein S ABE28_008345 6beab40e7b4080b26cb542df4a28db67 86 Gene3D G3DSA:3.30.110.20 1 86 6.8E-36 T 11-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 ABE28_016335 e219f6393de8e0cc5c4f188393a1bd1d 110 SUPERFAMILY SSF118010 1 108 3.79E-31 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily ABE28_016335 e219f6393de8e0cc5c4f188393a1bd1d 110 Pfam PF04327 Cysteine protease Prp 1 105 2.6E-27 T 11-10-2018 IPR007422 Cysteine protease Prp ABE28_016335 e219f6393de8e0cc5c4f188393a1bd1d 110 Gene3D G3DSA:3.30.70.1490 1 110 7.7E-34 T 11-10-2018 IPR036764 Cysteine protease Prp superfamily ABE28_011445 ec2b81e5f58842a4ab00866436409484 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 88 3.4E-4 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_011445 ec2b81e5f58842a4ab00866436409484 125 SUPERFAMILY SSF54593 1 124 1.88E-14 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011445 ec2b81e5f58842a4ab00866436409484 125 Gene3D G3DSA:3.10.180.10 1 124 1.1E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_004570 9566b7272b31b08404bdaf8761c09fd7 282 Gene3D G3DSA:3.40.50.300 2 257 1.7E-65 T 11-10-2018 ABE28_004570 9566b7272b31b08404bdaf8761c09fd7 282 SUPERFAMILY SSF52540 4 231 3.86E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004570 9566b7272b31b08404bdaf8761c09fd7 282 SMART SM00382 28 217 5.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_004570 9566b7272b31b08404bdaf8761c09fd7 282 Pfam PF00005 ABC transporter 20 167 3.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_004570 9566b7272b31b08404bdaf8761c09fd7 282 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_011545 84677e67b3075698a268b8f4ad3fd966 334 Gene3D G3DSA:3.40.190.170 25 329 3.0E-84 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily ABE28_011545 84677e67b3075698a268b8f4ad3fd966 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 37 292 3.1E-54 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABE28_011545 84677e67b3075698a268b8f4ad3fd966 334 PIRSF PIRSF006470 2 330 1.6E-69 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 ABE28_011545 84677e67b3075698a268b8f4ad3fd966 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 314 1.2E-67 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 ABE28_009810 0c6f28af15c0409dc5ad94416fe66085 446 SUPERFAMILY SSF50443 313 442 2.48E-5 T 11-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal ABE28_009810 0c6f28af15c0409dc5ad94416fe66085 446 SUPERFAMILY SSF53743 9 304 1.29E-38 T 11-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 ABE28_003780 968480dbb161d4979429ed65f9462990 379 SUPERFAMILY SSF51735 157 341 1.83E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_003780 968480dbb161d4979429ed65f9462990 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 143 1.3E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 ABE28_003780 968480dbb161d4979429ed65f9462990 379 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 4.1E-10 T 11-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated ABE28_003780 968480dbb161d4979429ed65f9462990 379 Pfam PF00107 Zinc-binding dehydrogenase 190 257 4.7E-10 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_003780 968480dbb161d4979429ed65f9462990 379 SUPERFAMILY SSF50129 1 178 1.98E-61 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_003780 968480dbb161d4979429ed65f9462990 379 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 ABE28_003780 968480dbb161d4979429ed65f9462990 379 Gene3D G3DSA:3.40.50.720 170 339 4.5E-131 T 11-10-2018 ABE28_003780 968480dbb161d4979429ed65f9462990 379 Gene3D G3DSA:3.90.180.10 4 366 4.5E-131 T 11-10-2018 ABE28_022040 2ae1d996e510047e189d9546a69e0cd2 322 Pfam PF08378 Nuclease-related domain 41 155 7.2E-17 T 11-10-2018 IPR011528 Nuclease-related domain, NERD ABE28_009005 4055aa487e0c2d57dc02b3f61c15b4b1 184 SUPERFAMILY SSF54106 139 183 7.72E-9 T 11-10-2018 ABE28_009005 4055aa487e0c2d57dc02b3f61c15b4b1 184 Gene3D G3DSA:3.10.350.10 137 184 2.8E-10 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_009005 4055aa487e0c2d57dc02b3f61c15b4b1 184 SMART SM00257 141 184 4.5E-6 T 11-10-2018 IPR018392 LysM domain ABE28_009005 4055aa487e0c2d57dc02b3f61c15b4b1 184 Pfam PF01476 LysM domain 142 183 3.1E-7 T 11-10-2018 IPR018392 LysM domain ABE28_024230 be1ce4e47e8b70d6a99c10852c2094c3 169 Gene3D G3DSA:1.20.120.450 23 168 5.1E-28 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024230 be1ce4e47e8b70d6a99c10852c2094c3 169 SUPERFAMILY SSF109854 8 164 1.36E-32 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_024230 be1ce4e47e8b70d6a99c10852c2094c3 169 Pfam PF12867 DinB superfamily 33 163 3.1E-17 T 11-10-2018 IPR024775 DinB-like domain ABE28_005470 f141d0d82d103fbb1c7f91cdfba9fedd 263 TIGRFAM TIGR00266 TIGR00266: TIGR00266 family protein 8 227 2.4E-35 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 ABE28_005470 f141d0d82d103fbb1c7f91cdfba9fedd 263 Pfam PF01987 Mitochondrial biogenesis AIM24 8 226 2.1E-67 T 11-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 ABE28_005470 f141d0d82d103fbb1c7f91cdfba9fedd 263 Gene3D G3DSA:3.60.160.10 1 251 2.3E-101 T 11-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily ABE28_005470 f141d0d82d103fbb1c7f91cdfba9fedd 263 SUPERFAMILY SSF51219 6 246 8.89E-84 T 11-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily ABE28_023065 bc2044a7445c3f3b6564a10a6f678bfb 169 Pfam PF08741 YwhD family 6 167 4.9E-82 T 11-10-2018 IPR014852 Uncharacterised protein YwhD ABE28_011075 84df92de88d85d381be4bb74774790ca 221 Pfam PF05901 Excalibur calcium-binding domain 185 220 3.5E-10 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ABE28_011075 84df92de88d85d381be4bb74774790ca 221 Gene3D G3DSA:1.20.5.340 55 178 2.7E-5 T 11-10-2018 ABE28_011075 84df92de88d85d381be4bb74774790ca 221 SMART SM00894 184 220 2.3E-11 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ABE28_007540 30ecbec665e900d56946eb15375883e6 308 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 2 299 2.8E-79 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 ABE28_007540 30ecbec665e900d56946eb15375883e6 308 PIRSF PIRSF018571 1 301 1.1E-77 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 ABE28_007540 30ecbec665e900d56946eb15375883e6 308 Pfam PF03419 Sporulation factor SpoIIGA 2 298 2.3E-78 T 11-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 356 534 4.7E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 262 3.6E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 Gene3D G3DSA:1.10.3720.10 6 268 8.5E-41 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 Gene3D G3DSA:1.10.3720.10 292 535 1.9E-27 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 SUPERFAMILY SSF161098 295 531 7.38E-33 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017640 d92999bc25dc9e34c2fea76f33a523df 538 SUPERFAMILY SSF161098 7 265 1.96E-39 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013985 cbfecce2e915b29c86a518a8bbec2775 103 PIRSF PIRSF029938 1 103 1.1E-41 T 11-10-2018 IPR011229 Cell cycle protein GpsB ABE28_013985 cbfecce2e915b29c86a518a8bbec2775 103 Pfam PF05103 DivIVA protein 8 67 6.2E-16 T 11-10-2018 IPR007793 DivIVA family ABE28_013985 cbfecce2e915b29c86a518a8bbec2775 103 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 4.2E-16 T 11-10-2018 IPR019933 DivIVA domain ABE28_013985 cbfecce2e915b29c86a518a8bbec2775 103 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 99 23.818 T 11-10-2018 IPR011229 Cell cycle protein GpsB ABE28_010860 a98ee843b62244368bc11727766dbe08 148 Pfam PF01047 MarR family 33 91 3.2E-12 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010860 a98ee843b62244368bc11727766dbe08 148 SUPERFAMILY SSF46785 8 142 3.12E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010860 a98ee843b62244368bc11727766dbe08 148 SMART SM00347 26 126 5.2E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010860 a98ee843b62244368bc11727766dbe08 148 Gene3D G3DSA:1.10.10.10 4 145 3.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 SMART SM00079 51 269 0.0062 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 74 87 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 SMART SM00062 51 270 2.3E-82 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 Gene3D G3DSA:3.40.190.10 50 262 1.5E-74 T 11-10-2018 ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 SUPERFAMILY SSF53850 1 270 1.11E-70 T 11-10-2018 ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 Gene3D G3DSA:3.40.190.10 134 231 1.5E-74 T 11-10-2018 ABE28_003385 ffc95766d13b940c8e15f818272e4798 274 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 269 5.9E-66 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.283 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 SMART SM01403 7 101 1.3E-60 T 11-10-2018 IPR027486 Ribosomal protein S10 domain ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 Gene3D G3DSA:3.30.70.600 1 62 4.2E-21 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 Gene3D G3DSA:3.30.70.600 65 102 1.3E-14 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 7.3E-47 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 9.5E-37 T 11-10-2018 IPR027486 Ribosomal protein S10 domain ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 5.9E-20 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 SUPERFAMILY SSF54999 5 102 9.55E-39 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily ABE28_000580 5a63d7f29dd0ed848f2ba99209762822 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 ABE28_007335 cd821ab2e317a07b771d8e06f6e553b4 153 Pfam PF04238 Protein of unknown function (DUF420) 6 134 3.5E-38 T 11-10-2018 IPR007352 Protein of unknown function DUF420 ABE28_007335 cd821ab2e317a07b771d8e06f6e553b4 153 Gene3D G3DSA:1.20.120.80 1 137 3.5E-6 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 ABE28_008490 7bb45b65c10e19624b0be491452f361d 346 Pfam PF02126 Phosphotriesterase family 22 327 3.0E-39 T 11-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 ABE28_008490 7bb45b65c10e19624b0be491452f361d 346 SUPERFAMILY SSF51556 23 327 1.65E-38 T 11-10-2018 IPR032466 Metal-dependent hydrolase ABE28_008490 7bb45b65c10e19624b0be491452f361d 346 Gene3D G3DSA:3.20.20.140 11 332 1.0E-72 T 11-10-2018 ABE28_016245 038bbcc49bbb4ce3d9ebacc34f185abc 201 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 17 193 6.6E-22 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_022465 335ce27e13827a75195931745c8bc44a 87 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 85 1.8E-16 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 ABE28_022465 335ce27e13827a75195931745c8bc44a 87 SUPERFAMILY SSF101498 1 85 2.88E-19 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily ABE28_022465 335ce27e13827a75195931745c8bc44a 87 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 83 3.0E-13 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal ABE28_019870 43758651b1a5498025ca462ed8864509 175 Gene3D G3DSA:3.40.630.30 3 174 8.6E-47 T 11-10-2018 ABE28_019870 43758651b1a5498025ca462ed8864509 175 Pfam PF13302 Acetyltransferase (GNAT) domain 9 148 6.0E-29 T 11-10-2018 IPR000182 GNAT domain ABE28_019870 43758651b1a5498025ca462ed8864509 175 SUPERFAMILY SSF55729 1 173 9.3E-50 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 Gene3D G3DSA:3.40.1190.20 1 306 5.0E-111 T 11-10-2018 IPR029056 Ribokinase-like ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 SUPERFAMILY SSF53613 1 300 1.71E-71 T 11-10-2018 IPR029056 Ribokinase-like ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 8.1E-114 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 Pfam PF00294 pfkB family carbohydrate kinase 11 284 2.3E-61 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 PIRSF PIRSF000535 1 303 2.5E-98 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_012960 c15109505aaf4d89578223bacd68ecc2 306 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 2.9E-112 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 ABE28_004095 2bc41990e855954341d202a271628cfd 304 Gene3D G3DSA:3.40.50.1980 136 304 3.6E-54 T 11-10-2018 ABE28_004095 2bc41990e855954341d202a271628cfd 304 SUPERFAMILY SSF53807 38 297 3.45E-48 T 11-10-2018 ABE28_004095 2bc41990e855954341d202a271628cfd 304 Gene3D G3DSA:3.40.50.1980 48 135 1.1E-22 T 11-10-2018 ABE28_004095 2bc41990e855954341d202a271628cfd 304 Pfam PF01497 Periplasmic binding protein 69 280 1.5E-26 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_010540 1cdee62cbd21abb5ec77c5e607824df0 462 SUPERFAMILY SSF103473 8 436 2.62E-76 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010540 1cdee62cbd21abb5ec77c5e607824df0 462 ProSitePatterns PS00217 Sugar transport proteins signature 2. 116 141 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_010540 1cdee62cbd21abb5ec77c5e607824df0 462 Gene3D G3DSA:1.10.286.90 201 230 3.7E-7 T 11-10-2018 ABE28_010540 1cdee62cbd21abb5ec77c5e607824df0 462 Pfam PF00083 Sugar (and other) transporter 25 436 1.3E-56 T 11-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 ABE28_003090 ab2088a14b95ed227cf5a557f0425924 74 Gene3D G3DSA:1.10.260.40 2 70 2.5E-6 T 11-10-2018 ABE28_003090 ab2088a14b95ed227cf5a557f0425924 74 Pfam PF01381 Helix-turn-helix 18 73 3.6E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_003090 ab2088a14b95ed227cf5a557f0425924 74 SMART SM00530 17 73 2.9E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_003090 ab2088a14b95ed227cf5a557f0425924 74 SUPERFAMILY SSF47413 12 73 2.96E-8 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 Gene3D G3DSA:3.30.360.110 1 62 1.1E-25 T 11-10-2018 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 SUPERFAMILY SSF56276 2 113 1.84E-39 T 11-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 31.754 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 7.9E-41 T 11-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 Gene3D G3DSA:3.30.160.750 63 124 6.1E-18 T 11-10-2018 ABE28_016900 fc42b52702552d805df1f28e267c5b45 126 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 6.1E-37 T 11-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1163 60.758 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 308 694 1.1E-6 T 11-10-2018 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Gene3D G3DSA:3.40.50.300 276 421 1.2E-27 T 11-10-2018 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Gene3D G3DSA:3.40.50.300 551 695 3.3E-39 T 11-10-2018 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 SUPERFAMILY SSF52540 305 748 7.22E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Pfam PF12705 PD-(D/E)XK nuclease superfamily 789 1132 1.5E-58 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1162 0.0 T 11-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 ABE28_005865 f7d92fbc5e3943241e46d3fbb7601cb2 1165 Gene3D G3DSA:3.40.50.300 1 151 2.7E-34 T 11-10-2018 ABE28_023420 29f5a8565cf0669c294f7934dfcd2555 286 SUPERFAMILY SSF52091 168 275 4.51E-16 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_023420 29f5a8565cf0669c294f7934dfcd2555 286 Gene3D G3DSA:3.30.750.24 166 280 1.8E-33 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_023420 29f5a8565cf0669c294f7934dfcd2555 286 Pfam PF01740 STAS domain 173 273 3.7E-13 T 11-10-2018 IPR002645 STAS domain ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 Gene3D G3DSA:3.20.20.20 5 278 1.0E-113 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 58 71 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 24 273 2.1E-99 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 SUPERFAMILY SSF51717 10 275 2.75E-100 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 Pfam PF00809 Pterin binding enzyme 25 258 2.1E-84 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_000380 5c91c49a4f71d8c9591566580224485d 281 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 24 39 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 ABE28_009525 1c276edbca7550b4c51e82ef06203335 126 SUPERFAMILY SSF47240 7 125 8.13E-12 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_009525 1c276edbca7550b4c51e82ef06203335 126 Gene3D G3DSA:1.20.1260.10 1 126 1.8E-24 T 11-10-2018 IPR012347 Ferritin-like ABE28_009525 1c276edbca7550b4c51e82ef06203335 126 Pfam PF09537 Domain of unknown function (DUF2383) 1 84 4.4E-13 T 11-10-2018 IPR019052 Domain of unknown function DUF2383 ABE28_022275 e2311b8d9edb36a7a484927b1bb5af1d 315 Pfam PF07670 Nucleoside recognition 177 264 5.1E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABE28_022275 e2311b8d9edb36a7a484927b1bb5af1d 315 Pfam PF07670 Nucleoside recognition 19 100 5.6E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABE28_010240 99a8f518d34a0e62f454746f4d1d5300 466 Pfam PF07690 Major Facilitator Superfamily 29 358 1.1E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_010240 99a8f518d34a0e62f454746f4d1d5300 466 ProSitePatterns PS00217 Sugar transport proteins signature 2. 130 155 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_010240 99a8f518d34a0e62f454746f4d1d5300 466 SUPERFAMILY SSF103473 12 434 1.03E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_010240 99a8f518d34a0e62f454746f4d1d5300 466 Gene3D G3DSA:1.20.1250.20 17 437 1.7E-65 T 11-10-2018 ABE28_007985 a5ce6788a996fbb1b93112ac17b0535a 127 Pfam PF12611 Putative flagellar 103 125 1.2E-9 T 11-10-2018 IPR013367 Flagellar, putative ABE28_007985 a5ce6788a996fbb1b93112ac17b0535a 127 TIGRFAM TIGR02530 flg_new: flagellar operon protein 31 126 5.8E-33 T 11-10-2018 IPR013367 Flagellar, putative ABE28_011130 f1d9be52fdd605455d88d50b03272ca2 175 Pfam PF12867 DinB superfamily 10 151 4.9E-11 T 11-10-2018 IPR024775 DinB-like domain ABE28_011130 f1d9be52fdd605455d88d50b03272ca2 175 SUPERFAMILY SSF109854 6 151 1.81E-13 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_011130 f1d9be52fdd605455d88d50b03272ca2 175 Gene3D G3DSA:1.20.120.450 2 162 2.8E-15 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_007300 df13e945247e3f735592a2e89e52f83c 328 Pfam PF02628 Cytochrome oxidase assembly protein 55 287 3.6E-27 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 ABE28_007300 df13e945247e3f735592a2e89e52f83c 328 Hamap MF_01664 Heme A synthase [ctaA]. 1 302 29.207 T 11-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 ABE28_018770 7f129cabd7b1d6d3415577eb540043f6 70 Gene3D G3DSA:1.10.1200.20 3 70 1.1E-5 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily ABE28_018770 7f129cabd7b1d6d3415577eb540043f6 70 SUPERFAMILY SSF47345 6 63 3.14E-7 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily ABE28_018770 7f129cabd7b1d6d3415577eb540043f6 70 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 6 62 1.2E-6 T 11-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 ABE28_018730 7f129cabd7b1d6d3415577eb540043f6 70 Gene3D G3DSA:1.10.1200.20 3 70 1.1E-5 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily ABE28_018730 7f129cabd7b1d6d3415577eb540043f6 70 SUPERFAMILY SSF47345 6 63 3.14E-7 T 11-10-2018 IPR035900 Colicin E immunity protein superfamily ABE28_018730 7f129cabd7b1d6d3415577eb540043f6 70 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 6 62 1.2E-6 T 11-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 ABE28_013300 912a6c9be0138145d7dbd85b4293d328 51 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 27 50 5.3E-12 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_013300 912a6c9be0138145d7dbd85b4293d328 51 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 25 50 2.0E-14 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_009245 c32f8de616874a0f1c6aa3fa93c3bbbb 326 Pfam PF13884 Chaperone of endosialidase 214 263 2.9E-7 T 11-10-2018 IPR030392 Intramolecular chaperone auto-processing domain ABE28_005740 99678f357dddbbc5efb31cc069fbc027 172 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 168 6.0E-39 T 11-10-2018 ABE28_005740 99678f357dddbbc5efb31cc069fbc027 172 Pfam PF17099 Tryptophan transporter TrpP 2 164 6.0E-52 T 11-10-2018 IPR031360 Tryptophan transporter TrpP ABE28_008950 a9c389f9e4a3cb2bd8754a026b8d3ac3 199 Pfam PF14265 Domain of unknown function (DUF4355) 46 162 1.8E-21 T 11-10-2018 IPR025580 Protein of unknown function DUF4355 ABE28_005610 b8c4b4884f01ee6bbab7cc03b9a80b3a 84 Pfam PF11132 Transcriptional regulator protein (SplA) 6 76 3.0E-33 T 11-10-2018 IPR022608 Transcription regulator SplA ABE28_005610 b8c4b4884f01ee6bbab7cc03b9a80b3a 84 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 10 79 2.0E-13 T 11-10-2018 ABE28_008435 a731988efa03ebe2eceb5a38d6296b48 218 Gene3D G3DSA:3.50.30.100 2 198 2.1E-64 T 11-10-2018 ABE28_008435 a731988efa03ebe2eceb5a38d6296b48 218 Pfam PF03737 Aldolase/RraA 16 175 3.3E-37 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABE28_008435 a731988efa03ebe2eceb5a38d6296b48 218 SUPERFAMILY SSF89562 13 186 2.88E-41 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABE28_010990 4da467c139145e1cb670467f21643970 70 Gene3D G3DSA:2.40.50.100 4 70 7.0E-25 T 11-10-2018 ABE28_010990 4da467c139145e1cb670467f21643970 70 Pfam PF00364 Biotin-requiring enzyme 4 69 5.1E-19 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_010990 4da467c139145e1cb670467f21643970 70 SUPERFAMILY SSF51230 4 70 3.01E-21 T 11-10-2018 IPR011053 Single hybrid motif ABE28_008310 2d2fe33f6f55a2b6771f69acf3937b3d 263 PIRSF PIRSF021288 1 262 1.2E-142 T 11-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain ABE28_008310 2d2fe33f6f55a2b6771f69acf3937b3d 263 SUPERFAMILY SSF55021 6 75 1.42E-7 T 11-10-2018 ABE28_008310 2d2fe33f6f55a2b6771f69acf3937b3d 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 4.0E-106 T 11-10-2018 IPR024514 Domain of unknown function DUF3388 ABE28_011950 e5195aff2bceb1cc10d7e060e62a54c9 258 Gene3D G3DSA:1.10.287.110 194 257 2.2E-7 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ABE28_011950 e5195aff2bceb1cc10d7e060e62a54c9 258 SUPERFAMILY SSF46565 200 255 2.09E-8 T 11-10-2018 IPR036869 Chaperone J-domain superfamily ABE28_020520 de33b61120627de885b5cea0ae31606a 280 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 66 157 0.002 T 11-10-2018 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 Pfam PF07687 Peptidase dimerisation domain 217 309 3.0E-15 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 Pfam PF01546 Peptidase family M20/M25/M40 100 413 5.4E-22 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 Gene3D G3DSA:3.40.630.10 2 285 3.1E-80 T 11-10-2018 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 Gene3D G3DSA:3.40.630.10 288 419 4.8E-12 T 11-10-2018 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 PIRSF PIRSF005962 2 419 1.5E-105 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 SUPERFAMILY SSF53187 3 418 1.69E-60 T 11-10-2018 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 3 404 1.0E-89 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_009460 0357a62ce0058b0f91b2cf9bf5a639bd 419 SUPERFAMILY SSF55031 213 321 3.79E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_015820 cc5ba1c11ac4be3ccd0dfdec7fa115aa 430 Gene3D G3DSA:2.60.120.380 26 134 8.5E-12 T 11-10-2018 ABE28_015820 cc5ba1c11ac4be3ccd0dfdec7fa115aa 430 SUPERFAMILY SSF89260 140 232 7.98E-10 T 11-10-2018 ABE28_015820 cc5ba1c11ac4be3ccd0dfdec7fa115aa 430 Gene3D G3DSA:2.60.120.380 135 249 4.4E-17 T 11-10-2018 ABE28_007355 7b4bd6759a23f4cfd861c2786921d0a3 142 Pfam PF14071 Putative coat protein 12 142 4.0E-35 T 11-10-2018 IPR025953 Putative coat protein YlbD ABE28_006520 1eeb8bbfdc79dcfaf52a8e5c504c9692 294 Gene3D G3DSA:1.10.3720.10 29 287 4.5E-60 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006520 1eeb8bbfdc79dcfaf52a8e5c504c9692 294 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 25 284 1.9E-94 T 11-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 ABE28_006520 1eeb8bbfdc79dcfaf52a8e5c504c9692 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 281 2.4E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_006520 1eeb8bbfdc79dcfaf52a8e5c504c9692 294 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 28 286 6.1E-123 T 11-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 ABE28_006520 1eeb8bbfdc79dcfaf52a8e5c504c9692 294 SUPERFAMILY SSF161098 27 279 1.57E-52 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022345 89ab40f5cc00368ef962c8dc90abde1f 388 Gene3D G3DSA:2.30.42.10 272 362 4.0E-11 T 11-10-2018 ABE28_022345 89ab40f5cc00368ef962c8dc90abde1f 388 SMART SM00228 286 354 9.4E-7 T 11-10-2018 IPR001478 PDZ domain GO:0005515 ABE28_022345 89ab40f5cc00368ef962c8dc90abde1f 388 SUPERFAMILY SSF50156 288 358 1.97E-12 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 SUPERFAMILY SSF48179 162 267 9.01E-36 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 Gene3D G3DSA:1.10.3730.10 165 268 9.6E-39 T 11-10-2018 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 SUPERFAMILY SSF51735 3 159 2.35E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004780 d0c874baaf12761231d7d501fba39464 268 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 264 3.1E-82 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 26.564 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 98 2.7E-16 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal ABE28_004780 d0c874baaf12761231d7d501fba39464 268 PIRSF PIRSF000193 2 268 5.8E-82 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 5.4E-38 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 ABE28_004780 d0c874baaf12761231d7d501fba39464 268 Gene3D G3DSA:3.40.50.720 1 164 4.0E-48 T 11-10-2018 ABE28_001750 24033e37a4fd6844178b04e14689b6a5 436 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 8 382 1.7E-122 T 11-10-2018 IPR018778 Type VII secretion system EssB ABE28_001750 24033e37a4fd6844178b04e14689b6a5 436 Gene3D G3DSA:1.25.40.680 240 399 3.0E-55 T 11-10-2018 ABE28_001750 24033e37a4fd6844178b04e14689b6a5 436 Gene3D G3DSA:1.10.510.10 2 218 2.9E-80 T 11-10-2018 ABE28_001750 24033e37a4fd6844178b04e14689b6a5 436 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 28 382 1.2E-120 T 11-10-2018 IPR018778 Type VII secretion system EssB ABE28_001735 30135bfeefdff0b96e0d07d6c5aa17e0 308 SUPERFAMILY SSF53590 1 305 3.92E-93 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_001735 30135bfeefdff0b96e0d07d6c5aa17e0 308 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 299 6.2E-91 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_001735 30135bfeefdff0b96e0d07d6c5aa17e0 308 Gene3D G3DSA:3.90.245.10 1 308 1.3E-107 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_010045 b4611b0572e2ea69eaced0c27d55441a 75 Pfam PF01206 Sulfurtransferase TusA 4 73 1.4E-19 T 11-10-2018 IPR001455 TusA-like domain ABE28_010045 b4611b0572e2ea69eaced0c27d55441a 75 Gene3D G3DSA:3.30.110.40 1 73 2.4E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_010045 b4611b0572e2ea69eaced0c27d55441a 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 5 29 - T 11-10-2018 IPR001455 TusA-like domain ABE28_010045 b4611b0572e2ea69eaced0c27d55441a 75 SUPERFAMILY SSF64307 3 74 3.01E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_011185 cc055cda3090114772c3ed08ad2a4110 162 SUPERFAMILY SSF56349 2 124 2.35E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_011185 cc055cda3090114772c3ed08ad2a4110 162 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 8 84 7.2E-11 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABE28_011185 cc055cda3090114772c3ed08ad2a4110 162 Gene3D G3DSA:1.10.150.130 1 106 6.6E-16 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ABE28_000180 cefee8be241802f196f4b649359d80be 191 Hamap MF_01469 Ribonuclease M5 [rnmV]. 8 183 31.766 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 ABE28_000180 cefee8be241802f196f4b649359d80be 191 Pfam PF13662 Toprim domain 9 77 1.1E-6 T 11-10-2018 IPR006171 TOPRIM domain ABE28_000180 cefee8be241802f196f4b649359d80be 191 Gene3D G3DSA:3.40.1360.20 5 123 1.1E-22 T 11-10-2018 ABE28_000180 cefee8be241802f196f4b649359d80be 191 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 7 179 8.2E-59 T 11-10-2018 IPR004466 Ribonuclease M5 GO:0043822 ABE28_000180 cefee8be241802f196f4b649359d80be 191 Pfam PF13331 Domain of unknown function (DUF4093) 98 181 1.1E-29 T 11-10-2018 IPR025156 Ribonuclease M5, C-terminal domain ABE28_000180 cefee8be241802f196f4b649359d80be 191 SUPERFAMILY SSF110455 5 119 6.8E-34 T 11-10-2018 ABE28_000180 cefee8be241802f196f4b649359d80be 191 SMART SM00493 9 82 1.6E-6 T 11-10-2018 IPR006171 TOPRIM domain ABE28_010945 de23ba3476a6f6743aa5d01069d8221e 370 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 365 1.0E-88 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_010945 de23ba3476a6f6743aa5d01069d8221e 370 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 199 364 1.8E-31 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_010945 de23ba3476a6f6743aa5d01069d8221e 370 Gene3D G3DSA:3.30.300.210 215 367 4.0E-39 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_018745 a5dee409f4109c5a8fd78e86e2fde84f 629 Pfam PF04740 LXG domain of WXG superfamily 17 210 1.3E-39 T 11-10-2018 IPR006829 LXG domain ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 SUPERFAMILY SSF52768 12 290 4.86E-85 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 Pfam PF00491 Arginase family 23 285 9.6E-79 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 Gene3D G3DSA:3.40.800.10 16 291 2.2E-93 T 11-10-2018 ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 PIRSF PIRSF036979 1 291 8.5E-97 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 ABE28_023050 0ba5aec499096fd76da31015c7cb3579 292 TIGRFAM TIGR01230 agmatinase: agmatinase 11 286 1.4E-117 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 ABE28_004160 566bfc4657914cffe42f8b2da02267bc 465 Gene3D G3DSA:1.10.4160.10 3 435 2.0E-50 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ABE28_004160 566bfc4657914cffe42f8b2da02267bc 465 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 10 428 3.6E-85 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABE28_004160 566bfc4657914cffe42f8b2da02267bc 465 PIRSF PIRSF002744 1 451 1.1E-132 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 ABE28_022735 11accc826d42b513e29821b5ac062efe 90 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ABE28_022735 11accc826d42b513e29821b5ac062efe 90 Gene3D G3DSA:1.10.10.60 1 90 1.2E-41 T 11-10-2018 ABE28_022735 11accc826d42b513e29821b5ac062efe 90 Pfam PF12116 Stage III sporulation protein D 2 81 1.8E-40 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID ABE28_022735 11accc826d42b513e29821b5ac062efe 90 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 80 8.0E-46 T 11-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID ABE28_017105 04858cefe42f5237032d6db3517486d7 279 Pfam PF12787 EcsC protein family 9 272 2.0E-55 T 11-10-2018 IPR024787 EcsC protein ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 197 321 8.2E-23 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 383 529 3.4E-22 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 SUPERFAMILY SSF52518 4 175 3.25E-39 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Gene3D G3DSA:3.40.50.1220 186 343 1.7E-44 T 11-10-2018 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Gene3D G3DSA:3.40.50.970 1 178 6.8E-65 T 11-10-2018 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 PIRSF PIRSF036565 1 554 2.7E-178 T 11-10-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 SUPERFAMILY SSF52467 186 331 2.1E-29 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 174 3.7E-34 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 Gene3D G3DSA:3.40.50.970 348 546 3.1E-58 T 11-10-2018 ABE28_004740 094a621b219aac1c8629b0c86bf4af34 554 SUPERFAMILY SSF52518 354 544 3.5E-45 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_013775 f19d91c4879ddb4d7803d426421464de 128 Gene3D G3DSA:3.40.50.510 1 128 9.5E-30 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 ABE28_013775 f19d91c4879ddb4d7803d426421464de 128 Pfam PF03610 PTS system fructose IIA component 5 105 3.2E-16 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 ABE28_013775 f19d91c4879ddb4d7803d426421464de 128 SUPERFAMILY SSF53062 3 117 1.57E-25 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 ABE28_014545 9d33683dd066249921d97fd564ade224 197 Gene3D G3DSA:1.10.10.10 2 83 9.2E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014545 9d33683dd066249921d97fd564ade224 197 Pfam PF04079 Segregation and condensation complex subunit ScpB 9 168 3.2E-59 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABE28_014545 9d33683dd066249921d97fd564ade224 197 Gene3D G3DSA:1.10.10.10 84 179 8.5E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014545 9d33683dd066249921d97fd564ade224 197 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 5 190 7.6E-58 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABE28_014545 9d33683dd066249921d97fd564ade224 197 PIRSF PIRSF019345 1 193 8.1E-58 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABE28_014545 9d33683dd066249921d97fd564ade224 197 Hamap MF_01804 Segregation and condensation protein B [scpB]. 4 184 35.606 T 11-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 ABE28_014545 9d33683dd066249921d97fd564ade224 197 SUPERFAMILY SSF46785 3 81 2.99E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_014545 9d33683dd066249921d97fd564ade224 197 SUPERFAMILY SSF46785 86 159 1.04E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013810 4487aba552fd67a24994525dfd13aa74 501 Gene3D G3DSA:3.50.50.60 205 329 2.9E-13 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013810 4487aba552fd67a24994525dfd13aa74 501 Gene3D G3DSA:3.50.50.60 5 100 2.2E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013810 4487aba552fd67a24994525dfd13aa74 501 TIGRFAM TIGR02734 crtI_fam: phytoene desaturase 8 498 1.0E-106 T 11-10-2018 IPR014105 Carotenoid/retinoid oxidoreductase GO:0016117|GO:0055114 ABE28_013810 4487aba552fd67a24994525dfd13aa74 501 SUPERFAMILY SSF51905 1 494 1.44E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_013810 4487aba552fd67a24994525dfd13aa74 501 Pfam PF01593 Flavin containing amine oxidoreductase 15 488 1.5E-19 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 ABE28_009260 9292b11fc4fb0a934c0f2831946bd764 96 Gene3D G3DSA:3.90.20.10 5 94 2.7E-5 T 11-10-2018 ABE28_019975 a95f771ebb480448fcf48a6dfebdb3f4 319 Pfam PF12679 ABC-2 family transporter protein 4 317 1.1E-22 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 ABE28_003840 e90373382390a59671871ceb27478164 255 SUPERFAMILY SSF54001 10 254 4.17E-54 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_003840 e90373382390a59671871ceb27478164 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.6E-9 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 ABE28_003840 e90373382390a59671871ceb27478164 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.6E-9 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 ABE28_003840 e90373382390a59671871ceb27478164 255 PRINTS PR01543 Arylamine N-acetyltransferase signature 100 125 2.6E-9 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 ABE28_003840 e90373382390a59671871ceb27478164 255 Pfam PF00797 N-acetyltransferase 22 254 8.1E-42 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 ABE28_003840 e90373382390a59671871ceb27478164 255 Gene3D G3DSA:3.30.2140.20 1 254 9.6E-79 T 11-10-2018 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 Gene3D G3DSA:3.40.1010.20 104 197 2.3E-94 T 11-10-2018 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 Pfam PF02401 LytB protein 4 284 2.0E-80 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 Gene3D G3DSA:3.40.50.11270 12 103 2.3E-94 T 11-10-2018 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 1.1E-89 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 32.075 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 ABE28_015340 87aa093ab9dd95aff79c7ce62cb8e6af 314 Gene3D G3DSA:3.40.1010.20 7 284 2.3E-94 T 11-10-2018 ABE28_014340 57cb83379a892d655f42f97978295051 206 PIRSF PIRSF036710 1 203 3.8E-28 T 11-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 Gene3D G3DSA:3.30.230.30 1 132 1.3E-51 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 4.1E-73 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 3.1E-16 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 SUPERFAMILY SSF54211 2 129 8.34E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 SUPERFAMILY SSF54980 135 199 4.6E-8 T 11-10-2018 IPR035647 EF-G domain III/V-like ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 Pfam PF01205 Uncharacterized protein family UPF0029 20 122 2.3E-34 T 11-10-2018 IPR001498 Impact, N-terminal ABE28_022500 6b55b5e6de1087273049c9e28614e47e 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site ABE28_006635 9a05d309b019dea915625fe6a2f2c7cc 168 SUPERFAMILY SSF55729 5 166 1.42E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_006635 9a05d309b019dea915625fe6a2f2c7cc 168 Pfam PF13420 Acetyltransferase (GNAT) domain 8 142 4.9E-13 T 11-10-2018 ABE28_006635 9a05d309b019dea915625fe6a2f2c7cc 168 Gene3D G3DSA:3.40.630.30 2 167 1.4E-41 T 11-10-2018 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 SUPERFAMILY SSF55031 217 332 3.66E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 Gene3D G3DSA:3.30.70.360 217 330 8.0E-138 T 11-10-2018 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 Gene3D G3DSA:3.40.630.10 26 406 8.0E-138 T 11-10-2018 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 PIRSF PIRSF001235 5 415 1.0E-140 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 SUPERFAMILY SSF53187 7 412 4.0E-85 T 11-10-2018 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 Pfam PF01546 Peptidase family M20/M25/M40 80 408 1.1E-34 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_005035 4a8e86625a90b7357fac7a73aaade7e3 416 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 25 410 9.7E-134 T 11-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 ABE28_015920 3b956d6c51b1cc15fb99bdabafef35a7 406 Pfam PF04932 O-Antigen ligase 195 334 1.7E-20 T 11-10-2018 IPR007016 O-antigen ligase-related ABE28_007965 7100040c86bfcb169692af204c427375 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 142 7.8E-25 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ABE28_007965 7100040c86bfcb169692af204c427375 147 Pfam PF02050 Flagellar FliJ protein 22 142 2.0E-18 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 ABE28_003675 e6cf012b4e993d7006a881392a0e8d1d 176 Gene3D G3DSA:3.40.50.360 1 175 2.1E-47 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_003675 e6cf012b4e993d7006a881392a0e8d1d 176 SUPERFAMILY SSF52218 1 170 7.08E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_003675 e6cf012b4e993d7006a881392a0e8d1d 176 Pfam PF03358 NADPH-dependent FMN reductase 44 105 4.1E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_001400 70e0d4a4767100225c81640be076db57 275 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 5 136 2.0E-21 T 11-10-2018 ABE28_001400 70e0d4a4767100225c81640be076db57 275 Gene3D G3DSA:3.30.750.24 149 269 3.2E-39 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_001400 70e0d4a4767100225c81640be076db57 275 Pfam PF08678 Rsbr N terminal 9 137 1.0E-38 T 11-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain ABE28_001400 70e0d4a4767100225c81640be076db57 275 Gene3D G3DSA:1.10.490.10 1 137 5.2E-32 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 ABE28_001400 70e0d4a4767100225c81640be076db57 275 Pfam PF01740 STAS domain 155 255 4.9E-14 T 11-10-2018 IPR002645 STAS domain ABE28_001400 70e0d4a4767100225c81640be076db57 275 SUPERFAMILY SSF52091 151 245 1.55E-16 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_018285 7137eb22c11213a7d5266e253d762299 210 PIRSF PIRSF006324 1 208 4.5E-61 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABE28_018285 7137eb22c11213a7d5266e253d762299 210 Pfam PF01810 LysE type translocator 13 206 1.2E-36 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABE28_014190 a91447084889aac800ac0353f48da649 261 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 28 257 6.8E-77 T 11-10-2018 IPR014231 Sporulation protein YpjB ABE28_014190 a91447084889aac800ac0353f48da649 261 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 28 256 5.6E-86 T 11-10-2018 IPR014231 Sporulation protein YpjB ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 244 254 - T 11-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 Gene3D G3DSA:3.40.50.200 4 308 3.3E-110 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 42 61 8.4E-24 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 243 259 8.4E-24 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 PRINTS PR00723 Subtilisin serine protease family (S8) signature 79 92 8.4E-24 T 11-10-2018 IPR015500 Peptidase S8, subtilisin-related ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 83 93 - T 11-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 47 58 - T 11-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 Pfam PF00082 Subtilase family 42 297 1.4E-53 T 11-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 ABE28_002105 b8bf06e7d849ed576519f189c948b5c1 332 SUPERFAMILY SSF52743 23 306 5.89E-85 T 11-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 SUPERFAMILY SSF55874 221 339 4.71E-19 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 Gene3D G3DSA:3.30.565.10 210 342 1.8E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 SMART SM00387 248 341 7.9E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 Pfam PF07730 Histidine kinase 145 209 6.8E-15 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 249 339 1.4E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase ABE28_018235 f5fc3964fb274341e762a6a282fb5387 348 PIRSF PIRSF037431 1 347 2.4E-118 T 11-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 SUPERFAMILY SSF102114 23 289 4.19E-65 T 11-10-2018 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 SMART SM00729 58 266 1.3E-15 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 Gene3D G3DSA:3.20.20.70 3 262 7.0E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 Pfam PF04055 Radical SAM superfamily 64 225 9.4E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 PIRSF PIRSF005963 1 303 7.2E-137 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 Hamap MF_00206 Lipoyl synthase [lipA]. 1 296 147.487 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 TIGRFAM TIGR00510 lipA: lipoyl synthase 5 294 2.0E-122 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABE28_021680 e812a5bc7eb3e432875d5b73832c3886 304 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 46 2.0E-11 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SUPERFAMILY SSF51126 65 384 2.84E-20 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 306 329 2400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 257 289 1500.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 419 446 1800.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 471 500 5400.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 330 351 280.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 364 405 3900.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 203 225 12.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 SMART SM00710 447 469 4.8 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 Pfam PF13229 Right handed beta helix region 204 378 2.1E-10 T 11-10-2018 IPR039448 Right handed beta helix domain ABE28_020605 6435892e7621bb6b1a98b6ea7c8f2cd9 588 Gene3D G3DSA:2.160.20.10 67 494 3.4E-25 T 11-10-2018 IPR012334 Pectin lyase fold ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 SMART SM00729 2 223 2.0E-63 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 3 367 1.2E-125 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 SUPERFAMILY SSF102114 4 377 3.92E-124 T 11-10-2018 ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 Pfam PF06969 HemN C-terminal domain 303 365 4.0E-14 T 11-10-2018 IPR010723 HemN, C-terminal ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 Gene3D G3DSA:3.80.30.20 2 302 9.7E-105 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe ABE28_015525 6ac8804c3f760d40be5db1797c42964e 383 Pfam PF04055 Radical SAM superfamily 8 177 1.1E-27 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_001535 674afa74dfab95287b0f7bdbac1d761b 150 Pfam PF00583 Acetyltransferase (GNAT) family 18 125 4.7E-19 T 11-10-2018 IPR000182 GNAT domain ABE28_001535 674afa74dfab95287b0f7bdbac1d761b 150 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 2.8E-44 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 ABE28_001535 674afa74dfab95287b0f7bdbac1d761b 150 SUPERFAMILY SSF55729 1 137 6.29E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_001535 674afa74dfab95287b0f7bdbac1d761b 150 Gene3D G3DSA:3.40.630.30 5 150 1.0E-44 T 11-10-2018 ABE28_020540 0ab12b785234d3331d124bb0c888020e 214 Pfam PF13460 NAD(P)H-binding 7 190 9.5E-49 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_020540 0ab12b785234d3331d124bb0c888020e 214 SUPERFAMILY SSF51735 1 202 1.57E-40 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_020540 0ab12b785234d3331d124bb0c888020e 214 Gene3D G3DSA:3.40.50.720 2 214 5.4E-53 T 11-10-2018 ABE28_019225 9c338d950ba6fc2cd5f6b029eb9055ce 257 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 18 232 4.1E-34 T 11-10-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 ABE28_019225 9c338d950ba6fc2cd5f6b029eb9055ce 257 SUPERFAMILY SSF51621 1 234 4.89E-59 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_019225 9c338d950ba6fc2cd5f6b029eb9055ce 257 Gene3D G3DSA:3.20.20.60 1 256 5.4E-71 T 11-10-2018 ABE28_020105 4ddb48a88cfc32a710f55807a82c5891 1443 Pfam PF13290 Chitobiase/beta-hexosaminidase C-terminal domain 355 413 6.2E-19 T 11-10-2018 ABE28_020105 4ddb48a88cfc32a710f55807a82c5891 1443 SUPERFAMILY SSF54060 1216 1425 2.94E-56 T 11-10-2018 ABE28_020105 4ddb48a88cfc32a710f55807a82c5891 1443 Pfam PF04231 Endonuclease I 1219 1425 2.3E-42 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 ABE28_020105 4ddb48a88cfc32a710f55807a82c5891 1443 Gene3D G3DSA:3.60.10.10 685 985 1.6E-45 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABE28_020105 4ddb48a88cfc32a710f55807a82c5891 1443 SUPERFAMILY SSF56219 685 983 1.35E-32 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily ABE28_006375 7909561d4e74603faae3960194fbdbec 103 Pfam PF12986 Domain of unknown function (DUF3870) 5 97 2.3E-27 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 SUPERFAMILY SSF56300 169 512 3.8E-41 T 11-10-2018 ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 Gene3D G3DSA:3.60.21.70 164 580 5.2E-175 T 11-10-2018 IPR038607 PhoD-like superfamily ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 Pfam PF09423 PhoD-like phosphatase 172 509 3.1E-121 T 11-10-2018 IPR018946 Alkaline phosphatase D-related ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 Gene3D G3DSA:2.60.40.380 54 162 3.1E-42 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 64 159 1.4E-32 T 11-10-2018 IPR032093 Phospholipase D, N-terminal ABE28_010365 76f25b8c5e17ea762c7b6e2fb148fef0 580 SUPERFAMILY SSF49363 87 161 6.93E-5 T 11-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 ABE28_000270 f14a200fbedcfb56db68ace62e3a2463 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 2.5E-33 T 11-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 ABE28_000270 f14a200fbedcfb56db68ace62e3a2463 76 ProDom PD057826 YABK 4 75 3.0E-18 T 11-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 ABE28_004055 cce86968797f309a2d3ce4f05e8ca0b3 282 Gene3D G3DSA:3.30.2010.10 102 172 3.2E-8 T 11-10-2018 ABE28_004055 cce86968797f309a2d3ce4f05e8ca0b3 282 Pfam PF05569 BlaR1 peptidase M56 61 245 2.3E-10 T 11-10-2018 IPR008756 Peptidase M56 ABE28_012940 29117a191869a56653765a2f4223f875 190 Pfam PF13302 Acetyltransferase (GNAT) domain 10 156 9.5E-20 T 11-10-2018 IPR000182 GNAT domain ABE28_012940 29117a191869a56653765a2f4223f875 190 SUPERFAMILY SSF55729 4 181 9.53E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_012940 29117a191869a56653765a2f4223f875 190 Gene3D G3DSA:3.40.630.30 1 190 2.3E-39 T 11-10-2018 ABE28_021600 9d8457bdf9cbbbf1f95035143d5ab082 109 SUPERFAMILY SSF52833 2 106 4.62E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_021600 9d8457bdf9cbbbf1f95035143d5ab082 109 Pfam PF07315 Protein of unknown function (DUF1462) 10 101 7.5E-41 T 11-10-2018 IPR009190 Protein of unknown function DUF1462 ABE28_021600 9d8457bdf9cbbbf1f95035143d5ab082 109 PIRSF PIRSF010603 1 107 2.3E-43 T 11-10-2018 IPR009190 Protein of unknown function DUF1462 ABE28_021600 9d8457bdf9cbbbf1f95035143d5ab082 109 Gene3D G3DSA:3.40.30.30 1 105 7.9E-42 T 11-10-2018 IPR038218 YuzD-like superfamily ABE28_002920 b17c93c425b58d75fe1abee4b3bf6e7b 154 Pfam PF02391 MoaE protein 9 119 5.7E-36 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_002920 b17c93c425b58d75fe1abee4b3bf6e7b 154 SUPERFAMILY SSF54690 5 138 5.62E-45 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_002920 b17c93c425b58d75fe1abee4b3bf6e7b 154 Gene3D G3DSA:3.90.1170.40 3 147 1.2E-52 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 ABE28_002945 77f51c4adab00fa9479ffb7cde5fd76e 113 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 1 109 5.3E-33 T 11-10-2018 IPR018745 Domain of unknown function DUF2294 ABE28_005890 40e9f5a5a0cb8a7a218e4e31c2226fcf 203 Pfam PF10737 Spore germination protein GerPC 23 191 1.3E-45 T 11-10-2018 IPR019673 Spore germination protein GerPC ABE28_023075 d60b54caa5a65cc0b286f6001244f50b 61 Gene3D G3DSA:3.30.429.10 1 60 3.2E-25 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily ABE28_023075 d60b54caa5a65cc0b286f6001244f50b 61 Pfam PF01361 Tautomerase enzyme 2 60 2.2E-21 T 11-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 ABE28_023075 d60b54caa5a65cc0b286f6001244f50b 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 1.2E-24 T 11-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 ABE28_023075 d60b54caa5a65cc0b286f6001244f50b 61 SUPERFAMILY SSF55331 2 60 1.7E-18 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily ABE28_019465 80b82897717403d7bc8e6c6e2448c806 255 SUPERFAMILY SSF55874 117 243 2.29E-9 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019465 80b82897717403d7bc8e6c6e2448c806 255 Gene3D G3DSA:3.30.565.10 109 243 4.8E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily ABE28_019465 80b82897717403d7bc8e6c6e2448c806 255 Pfam PF06580 Histidine kinase 54 133 2.0E-20 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 ABE28_020235 3f53a9f54587b5e1f71063a61680eef5 146 SUPERFAMILY SSF46785 3 136 2.48E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020235 3f53a9f54587b5e1f71063a61680eef5 146 Pfam PF02082 Transcriptional regulator 1 81 3.0E-19 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type ABE28_020235 3f53a9f54587b5e1f71063a61680eef5 146 Gene3D G3DSA:1.10.10.10 1 142 1.6E-51 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 Gene3D G3DSA:3.40.50.720 4 260 1.6E-72 T 11-10-2018 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 SUPERFAMILY SSF51735 8 259 2.63E-71 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 Pfam PF00106 short chain dehydrogenase 9 200 3.9E-58 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 107 127 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 237 256 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 172 195 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 211 230 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 87 104 3.5E-55 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.8E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_001150 42083426a4ee65ba2790f6cd108bcd03 261 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 260 8.0E-113 T 11-10-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 Gene3D G3DSA:1.10.10.10 1 128 2.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 Pfam PF01047 MarR family 18 74 1.1E-14 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 101 121 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 35 51 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 52 67 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 1.3E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 SMART SM00347 11 111 3.9E-20 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 SUPERFAMILY SSF46785 13 126 4.82E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010205 1c2a24412ecedc865d9a1f2e78ca8525 128 SMART SM00418 17 94 0.0055 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_016215 9968c4bdee63e3c76cc834b05298eae9 68 Pfam PF11146 Protein of unknown function (DUF2905) 6 64 4.2E-22 T 11-10-2018 IPR021320 Protein of unknown function DUF2905 ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 3.1E-61 T 11-10-2018 ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 SUPERFAMILY SSF51735 7 251 1.39E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.1E-45 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 186 4.2E-5 T 11-10-2018 ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 Gene3D G3DSA:3.40.50.720 1 254 8.7E-83 T 11-10-2018 ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 8.3E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.3E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_010790 46bc5a9e972af38858315afd6bc246f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 8.3E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 1.5E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.5E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.5E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.5E-25 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 Pfam PF01311 Bacterial export proteins, family 1 9 242 3.1E-73 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 ABE28_008035 c271bda1a10cc372496ee3b76bc93f99 258 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 252 4.0E-69 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 ABE28_019340 c1600e4742225c1ae718256481947bff 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 255 3.5E-14 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019340 c1600e4742225c1ae718256481947bff 262 SUPERFAMILY SSF161098 7 253 2.8E-50 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019340 c1600e4742225c1ae718256481947bff 262 Gene3D G3DSA:1.10.3720.10 3 252 1.9E-47 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013610 5597d65c9a181d2cf6a33c75c4ecbac6 315 SUPERFAMILY SSF161098 74 302 1.96E-66 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013610 5597d65c9a181d2cf6a33c75c4ecbac6 315 SUPERFAMILY SSF160964 31 72 5.36E-5 T 11-10-2018 ABE28_013610 5597d65c9a181d2cf6a33c75c4ecbac6 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 310 1.7E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_013610 5597d65c9a181d2cf6a33c75c4ecbac6 315 Gene3D G3DSA:1.10.3720.10 70 313 6.7E-78 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011945 37af02d3c8d6ac2b8e46300c26577c1c 82 Gene3D G3DSA:1.20.1250.20 1 82 1.2E-7 T 11-10-2018 ABE28_011945 37af02d3c8d6ac2b8e46300c26577c1c 82 SUPERFAMILY SSF103473 6 81 6.67E-8 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_007665 0a23eb5db14fde50ebb86a2b678ec29a 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 7.8E-38 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 ABE28_007665 0a23eb5db14fde50ebb86a2b678ec29a 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 4.8E-86 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 ABE28_007665 0a23eb5db14fde50ebb86a2b678ec29a 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 1.6E-38 T 11-10-2018 IPR013527 YicC-like, N-terminal ABE28_005330 aab7fbce7bcc2d096fdbef6dbff8fb5f 238 SUPERFAMILY SSF49373 152 222 7.32E-5 T 11-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments ABE28_005330 aab7fbce7bcc2d096fdbef6dbff8fb5f 238 Pfam PF13115 YtkA-like 44 113 1.3E-9 T 11-10-2018 IPR032693 YtkA-like domain ABE28_005330 aab7fbce7bcc2d096fdbef6dbff8fb5f 238 Pfam PF13115 YtkA-like 144 220 7.4E-15 T 11-10-2018 IPR032693 YtkA-like domain ABE28_005330 aab7fbce7bcc2d096fdbef6dbff8fb5f 238 Gene3D G3DSA:2.60.40.10 142 235 8.7E-8 T 11-10-2018 IPR013783 Immunoglobulin-like fold ABE28_014425 dc406a1b910fef03bdf336be1485f4a5 152 Pfam PF10864 Protein of unknown function (DUF2663) 19 150 5.4E-44 T 11-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane ABE28_014425 dc406a1b910fef03bdf336be1485f4a5 152 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 17 150 3.0E-18 T 11-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane ABE28_002910 d234917918828262560dea1b9dd84e69 338 SUPERFAMILY SSF69572 2 329 1.01E-88 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 ABE28_002910 d234917918828262560dea1b9dd84e69 338 Pfam PF00899 ThiF family 5 241 2.4E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 ABE28_002910 d234917918828262560dea1b9dd84e69 338 Gene3D G3DSA:3.40.50.720 2 249 2.7E-76 T 11-10-2018 ABE28_001960 3054f306f959bf4dd5c6bf8a20caf82b 104 PIRSF PIRSF012508 1 100 5.6E-48 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD ABE28_001960 3054f306f959bf4dd5c6bf8a20caf82b 104 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 2.0E-47 T 11-10-2018 IPR013368 TrpR homologue YerC/YecD ABE28_001960 3054f306f959bf4dd5c6bf8a20caf82b 104 SUPERFAMILY SSF48295 3 95 3.19E-32 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 ABE28_001960 3054f306f959bf4dd5c6bf8a20caf82b 104 Pfam PF01371 Trp repressor protein 10 93 3.7E-33 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 ABE28_001960 3054f306f959bf4dd5c6bf8a20caf82b 104 Gene3D G3DSA:1.10.1270.10 2 103 6.1E-39 T 11-10-2018 IPR038116 TrpR-like superfamily ABE28_020210 9279872cde3a2e8159df449bbb0c4cd7 295 Pfam PF00483 Nucleotidyl transferase 6 263 7.6E-40 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 ABE28_020210 9279872cde3a2e8159df449bbb0c4cd7 295 Gene3D G3DSA:3.90.550.10 1 290 5.2E-98 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_020210 9279872cde3a2e8159df449bbb0c4cd7 295 SUPERFAMILY SSF53448 1 268 3.13E-73 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_020210 9279872cde3a2e8159df449bbb0c4cd7 295 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 1.9E-121 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 ABE28_016315 35deb666a22f090c6263e997e4da47f4 149 Gene3D G3DSA:3.30.70.260 70 147 5.6E-7 T 11-10-2018 ABE28_016315 35deb666a22f090c6263e997e4da47f4 149 Hamap MF_00707 UPF0735 ACT domain-containing protein . 4 148 32.515 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein ABE28_016315 35deb666a22f090c6263e997e4da47f4 149 PIRSF PIRSF025624 1 148 1.4E-59 T 11-10-2018 IPR008310 UPF0735 ACT domain-containing protein ABE28_016315 35deb666a22f090c6263e997e4da47f4 149 SUPERFAMILY SSF55021 72 145 4.58E-11 T 11-10-2018 ABE28_007955 1360c9879aee995db91df700f85fc8fe 254 Pfam PF02108 Flagellar assembly protein FliH 126 241 3.7E-15 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE ABE28_007955 1360c9879aee995db91df700f85fc8fe 254 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 252 2.1E-60 T 11-10-2018 IPR022524 Flagellar assembly FliH, Bacilli ABE28_015935 ab6fb30893b294557f5e78e8d6ac33a4 513 SUPERFAMILY SSF51126 14 274 1.2E-16 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ABE28_015935 ab6fb30893b294557f5e78e8d6ac33a4 513 Gene3D G3DSA:2.160.20.10 17 297 4.0E-14 T 11-10-2018 IPR012334 Pectin lyase fold ABE28_016000 2734a0df97d4938da80acb11f7b53016 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 362 2.5E-76 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 ABE28_016000 2734a0df97d4938da80acb11f7b53016 375 Gene3D G3DSA:3.40.50.2000 188 325 1.0E-103 T 11-10-2018 ABE28_016000 2734a0df97d4938da80acb11f7b53016 375 Gene3D G3DSA:3.40.50.2000 6 187 1.0E-103 T 11-10-2018 ABE28_016000 2734a0df97d4938da80acb11f7b53016 375 SUPERFAMILY SSF53756 3 372 2.42E-104 T 11-10-2018 ABE28_016000 2734a0df97d4938da80acb11f7b53016 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 28 360 7.3E-87 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 462 726 7.1E-46 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 TIGRFAM TIGR02069 cyanophycinase: cyanophycinase 46 310 9.7E-51 T 11-10-2018 IPR011811 Peptidase S51, cyanophycinase GO:0016787|GO:0044260 MetaCyc: PWY-7052 ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 Gene3D G3DSA:3.40.50.880 458 751 4.6E-66 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 Gene3D G3DSA:3.40.50.880 42 335 5.9E-69 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 Pfam PF03575 Peptidase family S51 48 285 1.4E-9 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 Pfam PF03575 Peptidase family S51 545 698 1.6E-6 T 11-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 SUPERFAMILY SSF52317 59 296 1.43E-14 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_008645 ae82931ecf4689cc3869ae09abbbf2ec 849 SUPERFAMILY SSF52317 479 712 3.46E-15 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_017845 616efb695e759aef30eab97ca23b8f91 212 Pfam PF05908 Poly-gamma-glutamate hydrolase 8 198 7.9E-59 T 11-10-2018 IPR008585 Poly-gamma-glutamate hydrolase ABE28_017845 616efb695e759aef30eab97ca23b8f91 212 Gene3D G3DSA:3.40.630.100 3 212 1.1E-66 T 11-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily ABE28_004595 fce8c7323fe39316e5b6920cda517d20 69 Gene3D G3DSA:3.30.70.100 1 69 3.5E-6 T 11-10-2018 ABE28_004595 fce8c7323fe39316e5b6920cda517d20 69 SUPERFAMILY SSF55008 1 68 5.37E-9 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_001140 1a9dbe869b557c1fb5177db49f484074 325 Gene3D G3DSA:3.40.50.1980 46 170 1.1E-28 T 11-10-2018 ABE28_001140 1a9dbe869b557c1fb5177db49f484074 325 Pfam PF01497 Periplasmic binding protein 67 296 5.0E-25 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_001140 1a9dbe869b557c1fb5177db49f484074 325 Gene3D G3DSA:3.40.50.1980 171 325 1.6E-41 T 11-10-2018 ABE28_001140 1a9dbe869b557c1fb5177db49f484074 325 SUPERFAMILY SSF53807 50 318 1.92E-56 T 11-10-2018 ABE28_021540 35d66fa010c71c2cb2a152a351ab68a1 160 Pfam PF02681 Divergent PAP2 family 6 149 4.2E-50 T 11-10-2018 IPR003832 Protein of unknown function DUF212 ABE28_013770 acb85cbb8a95cb9aaa005911d16ccce7 156 SUPERFAMILY SSF52728 1 154 1.29E-43 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 ABE28_013770 acb85cbb8a95cb9aaa005911d16ccce7 156 Gene3D G3DSA:3.40.35.10 1 156 2.0E-50 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 ABE28_013770 acb85cbb8a95cb9aaa005911d16ccce7 156 Pfam PF03830 PTS system sorbose subfamily IIB component 3 148 3.6E-45 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 ABE28_016475 a1375bd1871f6f8e7fb9b0450c93a773 160 ProDom PD104119 YSXD OB2071 ORFY 1 159 2.0E-20 T 11-10-2018 ABE28_006860 16bbe0ca62a25a8ac97087153f03cfbc 353 Gene3D G3DSA:3.90.1200.10 118 352 1.2E-57 T 11-10-2018 ABE28_006860 16bbe0ca62a25a8ac97087153f03cfbc 353 Pfam PF01636 Phosphotransferase enzyme family 37 267 5.6E-34 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_006860 16bbe0ca62a25a8ac97087153f03cfbc 353 SUPERFAMILY SSF56112 17 342 3.5E-51 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_006860 16bbe0ca62a25a8ac97087153f03cfbc 353 Gene3D G3DSA:3.30.200.20 13 114 4.7E-26 T 11-10-2018 ABE28_009590 4c79199b1044f7b03b7a2a581636c623 379 Gene3D G3DSA:3.30.300.210 230 374 2.9E-13 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_009590 4c79199b1044f7b03b7a2a581636c623 379 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 373 2.1E-68 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_009590 4c79199b1044f7b03b7a2a581636c623 379 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 215 371 3.1E-18 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 156 5.1E-72 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 Gene3D G3DSA:3.30.1330.50 1 159 6.3E-69 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 Pfam PF02542 YgbB family 2 155 3.1E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 37.133 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_000465 63be2606b4b5807c5da94bdbc8a0caf5 159 SUPERFAMILY SSF69765 1 157 4.58E-67 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 ABE28_018075 71a17eb6d9423f3cd0dabde4fd56b030 192 Gene3D G3DSA:1.10.357.10 1 183 9.4E-30 T 11-10-2018 ABE28_018075 71a17eb6d9423f3cd0dabde4fd56b030 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 46 3.5E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_018075 71a17eb6d9423f3cd0dabde4fd56b030 192 SUPERFAMILY SSF46689 4 58 6.67E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_018075 71a17eb6d9423f3cd0dabde4fd56b030 192 SUPERFAMILY SSF48498 78 162 2.22E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Gene3D G3DSA:1.10.10.60 515 558 1.1E-14 T 11-10-2018 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Pfam PF02954 Bacterial regulatory protein, Fis family 518 558 9.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Pfam PF06506 Propionate catabolism activator 27 186 6.2E-49 T 11-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Gene3D G3DSA:1.10.8.60 427 505 1.6E-12 T 11-10-2018 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 SUPERFAMILY SSF46689 509 558 2.62E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 SUPERFAMILY SSF159800 4 185 2.22E-49 T 11-10-2018 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Gene3D G3DSA:3.40.50.2300 6 182 9.7E-56 T 11-10-2018 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 542 558 6.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 525 542 6.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 SUPERFAMILY SSF52540 310 501 1.39E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Gene3D G3DSA:3.40.50.300 307 384 5.2E-5 T 11-10-2018 ABE28_017165 4ccfc308154e1c19c2d56e98642df6b4 558 Gene3D G3DSA:3.40.50.10660 78 167 9.7E-56 T 11-10-2018 ABE28_017595 02c6ccc1bb98459fcef8da6cc143efb4 253 Pfam PF00005 ABC transporter 23 171 2.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_017595 02c6ccc1bb98459fcef8da6cc143efb4 253 SUPERFAMILY SSF52540 3 227 3.14E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_017595 02c6ccc1bb98459fcef8da6cc143efb4 253 Gene3D G3DSA:3.40.50.300 1 246 5.4E-66 T 11-10-2018 ABE28_017595 02c6ccc1bb98459fcef8da6cc143efb4 253 SMART SM00382 32 220 3.4E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005550 590563fb10ad4bcd6522d6d62a39060f 222 Gene3D G3DSA:1.10.3720.10 14 219 6.8E-48 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_005550 590563fb10ad4bcd6522d6d62a39060f 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 205 3.1E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_005550 590563fb10ad4bcd6522d6d62a39060f 222 SUPERFAMILY SSF161098 14 210 3.14E-45 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006445 074c5acfe2598d3dd4b0b577cf44db43 291 Gene3D G3DSA:1.10.3720.10 51 287 5.8E-58 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006445 074c5acfe2598d3dd4b0b577cf44db43 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 279 1.9E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_006445 074c5acfe2598d3dd4b0b577cf44db43 291 SUPERFAMILY SSF161098 55 278 1.13E-51 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 SUPERFAMILY SSF47005 112 157 1.7E-11 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 SUPERFAMILY SSF52777 201 423 6.23E-83 T 11-10-2018 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Gene3D G3DSA:4.10.320.10 110 165 8.9E-16 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Gene3D G3DSA:3.30.559.10 185 431 9.6E-100 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 SUPERFAMILY SSF51230 3 93 6.28E-26 T 11-10-2018 IPR011053 Single hybrid motif ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Pfam PF02817 e3 binding domain 119 153 1.1E-12 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Pfam PF00364 Biotin-requiring enzyme 6 77 8.3E-23 T 11-10-2018 IPR000089 Biotin/lipoyl attachment ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Gene3D G3DSA:2.40.50.100 2 101 1.9E-26 T 11-10-2018 ABE28_014855 a3b5d5aeb6fdb954168cabc822f19fae 431 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 201 424 7.4E-82 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 ABE28_006325 348cc3d6f1058f84dfba1ef8a4af4df7 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 68 4.0E-24 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_006325 348cc3d6f1058f84dfba1ef8a4af4df7 72 SUPERFAMILY SSF47413 1 68 9.01E-19 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_006325 348cc3d6f1058f84dfba1ef8a4af4df7 72 SMART SM00530 6 62 1.4E-5 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_006325 348cc3d6f1058f84dfba1ef8a4af4df7 72 Gene3D G3DSA:1.10.260.40 4 68 4.1E-9 T 11-10-2018 ABE28_001185 dd21e1b1adcf74a23513734a9fd1b386 238 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 105 205 4.3E-14 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001185 dd21e1b1adcf74a23513734a9fd1b386 238 SUPERFAMILY SSF56214 2 97 2.75E-22 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001185 dd21e1b1adcf74a23513734a9fd1b386 238 Gene3D G3DSA:3.90.470.20 105 208 1.5E-66 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001185 dd21e1b1adcf74a23513734a9fd1b386 238 SUPERFAMILY SSF56214 104 209 3.27E-23 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_001185 dd21e1b1adcf74a23513734a9fd1b386 238 Gene3D G3DSA:3.90.470.20 17 209 1.5E-66 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 ABE28_007175 97fc1cb8cfa0ef633d8abada42fa6cd4 144 Gene3D G3DSA:1.20.5.850 2 50 9.7E-16 T 11-10-2018 ABE28_007175 97fc1cb8cfa0ef633d8abada42fa6cd4 144 Gene3D G3DSA:3.30.310.120 51 141 3.6E-30 T 11-10-2018 ABE28_007175 97fc1cb8cfa0ef633d8abada42fa6cd4 144 SUPERFAMILY SSF111171 5 141 1.83E-40 T 11-10-2018 IPR036294 Rbstp2229-like superfamily ABE28_007175 97fc1cb8cfa0ef633d8abada42fa6cd4 144 Pfam PF08968 Domain of unknown function (DUF1885) 4 142 2.1E-57 T 11-10-2018 IPR015062 Protein of unknown function DUF1885 ABE28_021925 728d34cb2df8317872501891216197f7 206 Pfam PF03737 Aldolase/RraA 13 161 6.7E-40 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein ABE28_021925 728d34cb2df8317872501891216197f7 206 SUPERFAMILY SSF89562 10 170 5.1E-45 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily ABE28_021925 728d34cb2df8317872501891216197f7 206 Gene3D G3DSA:3.50.30.100 1 184 3.6E-54 T 11-10-2018 ABE28_003165 eddab5c1bd5ef7e5ec018289a4fb627a 63 SUPERFAMILY SSF54786 1 62 5.89E-18 T 11-10-2018 ABE28_003165 eddab5c1bd5ef7e5ec018289a4fb627a 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 6 62 1.7E-20 T 11-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 ABE28_003165 eddab5c1bd5ef7e5ec018289a4fb627a 63 Gene3D G3DSA:3.30.920.30 1 62 9.7E-30 T 11-10-2018 IPR038570 HicA superfamily ABE28_001710 877f2c2813ac05d0ae49e565a8534b2c 503 ProSitePatterns PS00218 Amino acid permeases signature. 62 93 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_001710 877f2c2813ac05d0ae49e565a8534b2c 503 PIRSF PIRSF006060 15 495 6.9E-83 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_001710 877f2c2813ac05d0ae49e565a8534b2c 503 Gene3D G3DSA:1.20.1740.10 28 493 1.0E-59 T 11-10-2018 ABE28_001710 877f2c2813ac05d0ae49e565a8534b2c 503 Pfam PF00324 Amino acid permease 37 486 6.6E-136 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_005325 16007bb69e150a307f83b1c405f976f9 188 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 6 183 5.3E-36 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_015335 b59171f39331d1dc143d57906728b610 228 Pfam PF14181 YqfQ-like protein 89 228 2.1E-28 T 11-10-2018 IPR025571 YqfQ-like protein ABE28_009495 5c7ea54d5b2760a9051d069894d602ed 244 Pfam PF03591 AzlC protein 29 169 9.3E-39 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease ABE28_011890 5ba9f23087b6a5813c6e6406914d8bf2 208 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 3 205 3.1E-20 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 SUPERFAMILY SSF55785 101 207 1.06E-13 T 11-10-2018 IPR035965 PAS domain superfamily ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Pfam PF00989 PAS fold 110 212 7.4E-9 T 11-10-2018 IPR013767 PAS fold GO:0006355 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 463 472 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Gene3D G3DSA:3.40.50.300 234 422 4.1E-63 T 11-10-2018 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Pfam PF00158 Sigma-54 interaction domain 252 418 7.0E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 SUPERFAMILY SSF52540 249 493 1.82E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 273 286 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 SMART SM00091 108 175 7.7E-9 T 11-10-2018 IPR000014 PAS domain ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Gene3D G3DSA:1.10.10.60 499 557 2.1E-5 T 11-10-2018 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 SMART SM00382 269 418 5.3E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 109 221 2.9E-11 T 11-10-2018 IPR000014 PAS domain ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Gene3D G3DSA:3.30.450.20 99 222 1.2E-16 T 11-10-2018 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 Gene3D G3DSA:1.10.8.60 423 498 7.0E-21 T 11-10-2018 ABE28_010805 7b3f6a26cd5818b090ef8e85c0191b7b 562 SUPERFAMILY SSF46689 504 556 1.97E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 Gene3D G3DSA:3.40.50.1000 8 203 2.2E-52 T 11-10-2018 IPR023214 HAD superfamily ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 53 177 1.3E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 Gene3D G3DSA:1.10.150.240 19 82 2.2E-52 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 88 183 1.5E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 3 216 43.933 T 11-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 1.0E-53 T 11-10-2018 ABE28_022270 a276966e6eda7d74c6d14126ba0426c0 222 SUPERFAMILY SSF56784 3 212 5.51E-57 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 8.5E-19 T 11-10-2018 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 Gene3D G3DSA:1.10.3860.10 2 408 4.3E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 SUPERFAMILY SSF118215 13 403 9.81E-87 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_023505 580a8a86f690aaad010a7456d2978f05 422 Pfam PF00375 Sodium:dicarboxylate symporter family 14 403 2.4E-100 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABE28_011610 fbfc6cbabb47437d6dc38a89f1565d4e 235 Pfam PF08713 DNA alkylation repair enzyme 6 195 7.3E-20 T 11-10-2018 IPR014825 DNA alkylation repair enzyme ABE28_011610 fbfc6cbabb47437d6dc38a89f1565d4e 235 SUPERFAMILY SSF48371 1 235 7.19E-66 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_016240 0edb923f3e1b464e08ba185e8a847235 169 Gene3D G3DSA:3.30.70.1740 92 168 6.2E-30 T 11-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily ABE28_016240 0edb923f3e1b464e08ba185e8a847235 169 Gene3D G3DSA:3.10.20.420 37 90 6.2E-26 T 11-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily ABE28_016240 0edb923f3e1b464e08ba185e8a847235 169 Pfam PF08955 BofC C-terminal domain 92 164 1.4E-26 T 11-10-2018 IPR015050 Bypass of forespore C, C-terminal ABE28_016240 0edb923f3e1b464e08ba185e8a847235 169 Pfam PF08977 Bypass of Forespore C, N terminal 41 89 1.6E-24 T 11-10-2018 IPR015071 Bypass-of-forespore C, N-terminal ABE28_010885 2fb1fd0b76263059c1fb1e7be9afb508 251 Gene3D G3DSA:3.20.20.70 1 251 2.1E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_010885 2fb1fd0b76263059c1fb1e7be9afb508 251 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 10 245 1.6E-111 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABE28_010885 2fb1fd0b76263059c1fb1e7be9afb508 251 Pfam PF07071 KDGP aldolase 10 227 1.4E-99 T 11-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 ABE28_009125 df418b746b6579911d6d3d83fd083b93 123 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 32 90 1.9E-10 T 11-10-2018 IPR006343 DnaD domain ABE28_009125 df418b746b6579911d6d3d83fd083b93 123 SUPERFAMILY SSF158499 32 87 3.79E-10 T 11-10-2018 IPR034829 DnaD-like domain superfamily ABE28_009125 df418b746b6579911d6d3d83fd083b93 123 Pfam PF07261 Replication initiation and membrane attachment 32 91 4.5E-9 T 11-10-2018 IPR006343 DnaD domain ABE28_009125 df418b746b6579911d6d3d83fd083b93 123 Gene3D G3DSA:1.10.10.630 30 95 5.1E-12 T 11-10-2018 IPR034829 DnaD-like domain superfamily ABE28_017420 2476fab9bc83858c98125bd841733c80 281 SUPERFAMILY SSF56281 4 262 6.55E-43 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017420 2476fab9bc83858c98125bd841733c80 281 Gene3D G3DSA:3.60.15.10 4 269 7.2E-83 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017420 2476fab9bc83858c98125bd841733c80 281 Pfam PF00753 Metallo-beta-lactamase superfamily 54 238 4.1E-14 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_017420 2476fab9bc83858c98125bd841733c80 281 SMART SM00849 50 257 9.6E-17 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 Pfam PF00436 Single-strand binding protein family 2 103 3.0E-37 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 155 1.0E-46 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 PIRSF PIRSF002070 1 146 3.9E-41 T 11-10-2018 ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 Gene3D G3DSA:2.40.50.140 1 111 2.0E-45 T 11-10-2018 ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 35.999 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 ABE28_008875 82f48127e57b9b5e6d13d83207290d85 161 SUPERFAMILY SSF50249 1 155 5.48E-54 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_014410 32bd526a5e2f56a202b55affa210f1c7 191 Gene3D G3DSA:3.30.70.1950 102 191 7.4E-27 T 11-10-2018 IPR038471 MecA, C-terminal domain superfamily ABE28_014410 32bd526a5e2f56a202b55affa210f1c7 191 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 85 4.0E-21 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_014410 32bd526a5e2f56a202b55affa210f1c7 191 Pfam PF05389 Negative regulator of genetic competence (MecA) 102 186 2.0E-17 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_014410 32bd526a5e2f56a202b55affa210f1c7 191 PIRSF PIRSF029008 1 191 4.0E-45 T 11-10-2018 IPR008681 Negative regulator of genetic competence, MecA ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 Pfam PF07729 FCD domain 100 219 6.5E-10 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 Gene3D G3DSA:1.10.10.10 6 80 9.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 SUPERFAMILY SSF46785 5 79 1.79E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 Gene3D G3DSA:1.20.120.530 95 229 6.8E-12 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.1E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 SMART SM00895 100 225 0.0072 T 11-10-2018 IPR011711 GntR, C-terminal ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 SMART SM00345 16 75 4.6E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_011560 2ba74b397778b51fff48ff63a58bad0f 234 SUPERFAMILY SSF48008 96 223 1.39E-10 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 Gene3D G3DSA:1.25.40.20 8 204 2.7E-53 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 PRINTS PR01415 Ankyrin repeat signature 161 175 1.5E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 PRINTS PR01415 Ankyrin repeat signature 107 122 1.5E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SUPERFAMILY SSF48403 12 203 6.63E-49 T 11-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SMART SM00248 73 102 170.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SMART SM00248 140 174 0.32 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SMART SM00248 106 136 340.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SMART SM00248 7 36 640.0 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 SMART SM00248 40 69 3.9E-5 T 11-10-2018 IPR002110 Ankyrin repeat GO:0005515 ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 Pfam PF12796 Ankyrin repeats (3 copies) 80 176 8.0E-11 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_013795 c2b12923f287cbfcfc3183625e31a02f 204 Pfam PF12796 Ankyrin repeats (3 copies) 12 71 4.3E-9 T 11-10-2018 IPR020683 Ankyrin repeat-containing domain ABE28_009615 3d507f84ae8b018b3dc78e0b215809f6 141 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 138 2.0E-32 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ ABE28_007765 86f606c11d1e7b9419f0b7a07b1802d7 294 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 2.0E-143 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_007765 86f606c11d1e7b9419f0b7a07b1802d7 294 Pfam PF03313 Serine dehydratase alpha chain 15 274 7.7E-74 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit ABE28_019275 46a082d5df7f2c258092b2c0c249fc9b 89 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 1.4E-13 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 ABE28_019275 46a082d5df7f2c258092b2c0c249fc9b 89 SUPERFAMILY SSF52794 1 85 3.92E-18 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 ABE28_019275 46a082d5df7f2c258092b2c0c249fc9b 89 Gene3D G3DSA:3.40.50.2300 1 87 4.1E-19 T 11-10-2018 ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 Pfam PF01471 Putative peptidoglycan binding domain 272 316 1.0E-6 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 19 129 2.0E-14 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 SUPERFAMILY SSF55166 18 146 2.88E-26 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 Gene3D G3DSA:3.30.1380.10 6 144 3.0E-35 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 Gene3D G3DSA:1.10.101.10 258 324 5.2E-12 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_009270 5f32fdfea38ea45053e89e9a2e62e197 324 SUPERFAMILY SSF47090 259 322 2.62E-11 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_016520 b167bac6649b7bd97784347c544764b5 469 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 463 58.132 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 ProSitePatterns PS00450 Aconitase family signature 1. 336 352 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 Pfam PF00330 Aconitase family (aconitate hydratase) 7 454 9.1E-154 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 Gene3D G3DSA:3.30.499.10 325 469 4.5E-50 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 SUPERFAMILY SSF53732 1 463 3.79E-159 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 462 2.9E-237 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 Gene3D G3DSA:3.30.499.20 4 285 1.6E-97 T 11-10-2018 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 285 299 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 396 409 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 118 131 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 194 207 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 208 221 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 81 94 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 340 351 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 132 147 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_016520 b167bac6649b7bd97784347c544764b5 469 PRINTS PR00415 Aconitase family signature 107 115 1.9E-45 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 Pfam PF00005 ABC transporter 17 171 1.3E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 Gene3D G3DSA:3.40.50.300 1 245 6.8E-77 T 11-10-2018 ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 SUPERFAMILY SSF52540 1 241 3.96E-78 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 SMART SM00382 26 226 2.9E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018060 eb87c389361f3c70a433ce53e590cc03 245 PIRSF PIRSF039085 1 245 9.3E-114 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 21 427 4.9E-195 T 11-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 TIGRFAM TIGR00238 TIGR00238: KamA family protein 14 342 1.5E-148 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 Gene3D G3DSA:2.40.50.600 349 415 7.7E-19 T 11-10-2018 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 SUPERFAMILY SSF102114 114 361 8.37E-34 T 11-10-2018 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 Gene3D G3DSA:3.20.20.70 63 348 1.6E-119 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 Pfam PF04055 Radical SAM superfamily 130 277 4.0E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_013255 6acebe5b6a28f4ca86410a9953192cd2 467 Pfam PF12544 Lysine-2,3-aminomutase 321 447 2.1E-61 T 11-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 4.4E-16 T 11-10-2018 IPR025302 Domain of unknown function DUF4162 ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 SUPERFAMILY SSF52540 3 222 1.07E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 Gene3D G3DSA:3.40.50.300 1 232 2.8E-59 T 11-10-2018 ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 Pfam PF00005 ABC transporter 19 158 1.4E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_010215 803ec948777dc58f7a4552c7705a353b 299 SMART SM00382 27 208 9.9E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_019910 aeca74af8dfbda472d7a475013152bdc 166 SUPERFAMILY SSF52172 2 128 4.41E-28 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_019910 aeca74af8dfbda472d7a475013152bdc 166 Pfam PF00072 Response regulator receiver domain 4 110 7.3E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019910 aeca74af8dfbda472d7a475013152bdc 166 SMART SM00448 2 113 8.1E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_019910 aeca74af8dfbda472d7a475013152bdc 166 Gene3D G3DSA:3.40.50.12740 2 164 6.8E-38 T 11-10-2018 ABE28_020465 4e98f89aa6676aadc63bf3dd7dfbb9d2 282 Pfam PF05114 Protein of unknown function (DUF692) 48 213 1.7E-13 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 ABE28_020465 4e98f89aa6676aadc63bf3dd7dfbb9d2 282 SUPERFAMILY SSF51658 29 240 8.82E-8 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_020465 4e98f89aa6676aadc63bf3dd7dfbb9d2 282 Gene3D G3DSA:3.20.20.150 14 272 3.8E-21 T 11-10-2018 ABE28_000760 68d435b783d59011340255ac384ae6c0 181 Gene3D G3DSA:1.10.357.10 7 178 1.2E-30 T 11-10-2018 ABE28_000760 68d435b783d59011340255ac384ae6c0 181 SUPERFAMILY SSF46689 9 75 3.13E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_000760 68d435b783d59011340255ac384ae6c0 181 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 64 1.1E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_009090 0d137e9d124715d48a493eb7ca882977 212 Pfam PF11611 Domain of unknown function (DUF4352) 74 203 2.5E-23 T 11-10-2018 IPR029051 Domain of unknown function DUF4352 ABE28_009090 0d137e9d124715d48a493eb7ca882977 212 Gene3D G3DSA:2.60.40.1240 67 202 2.0E-36 T 11-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily ABE28_005780 0ed26fccf12d810d5ce3f8b643965d81 171 Gene3D G3DSA:3.30.70.3430 1 167 3.0E-68 T 11-10-2018 ABE28_005780 0ed26fccf12d810d5ce3f8b643965d81 171 SUPERFAMILY SSF54909 65 168 5.37E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_005780 0ed26fccf12d810d5ce3f8b643965d81 171 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 139 2.8E-14 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_021045 773d15910a0f6a696f7c8d67bc7e2e6e 180 Pfam PF03551 Transcriptional regulator PadR-like family 7 82 1.0E-9 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_021045 773d15910a0f6a696f7c8d67bc7e2e6e 180 SUPERFAMILY SSF46785 3 176 4.43E-28 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_021045 773d15910a0f6a696f7c8d67bc7e2e6e 180 Gene3D G3DSA:1.10.10.10 1 90 7.4E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022785 93582d98a86232b3c73be819c42226fe 104 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 4 104 20.483 T 11-10-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 ABE28_022785 93582d98a86232b3c73be819c42226fe 104 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 9 99 1.4E-26 T 11-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like ABE28_010970 a58df0128e9c06ad12619d7904015194 184 SUPERFAMILY SSF46689 1 63 1.18E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 1 45 1.5E-18 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 1 14 1.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 22 45 1.7E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 SUPERFAMILY SSF48498 69 181 7.69E-22 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_010970 a58df0128e9c06ad12619d7904015194 184 Gene3D G3DSA:1.10.10.60 1 41 3.5E-19 T 11-10-2018 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 Gene3D G3DSA:1.10.357.10 42 183 1.1E-32 T 11-10-2018 ABE28_010970 a58df0128e9c06ad12619d7904015194 184 Pfam PF08359 YsiA-like protein, C-terminal region 56 177 5.7E-5 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 Gene3D G3DSA:3.30.200.20 20 107 3.1E-21 T 11-10-2018 ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 54 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 Gene3D G3DSA:1.10.510.10 108 261 3.1E-21 T 11-10-2018 ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 SMART SM00220 27 255 1.9E-7 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 Pfam PF00069 Protein kinase domain 27 232 1.2E-14 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABE28_000340 023b70aa84487fcb9e3fda537f15ca22 326 SUPERFAMILY SSF56112 14 235 1.24E-25 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_016785 b72c9cd0059587dcc0f7f429295af318 316 TIGRFAM TIGR02271 TIGR02271: conserved domain 183 298 2.7E-37 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 ABE28_016785 b72c9cd0059587dcc0f7f429295af318 316 Pfam PF09557 Domain of unknown function (DUF2382) 183 294 7.4E-29 T 11-10-2018 IPR019060 Domain of unknown function DUF2382 ABE28_016785 b72c9cd0059587dcc0f7f429295af318 316 Pfam PF11181 Heat induced stress protein YflT 6 109 6.8E-19 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 SUPERFAMILY SSF160467 13 115 1.44E-15 T 11-10-2018 ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 SMART SM00796 11 224 7.6E-94 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 Gene3D G3DSA:3.30.1360.40 7 107 2.1E-24 T 11-10-2018 ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 16 232 9.9E-78 T 11-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 SUPERFAMILY SSF50891 110 240 1.06E-48 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 12 224 2.8E-72 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D ABE28_010570 b8ff6317655900b2b7e818eef4283682 246 Gene3D G3DSA:2.40.100.10 109 246 8.7E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 SUPERFAMILY SSF51246 312 383 2.04E-11 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 Gene3D G3DSA:3.30.1490.20 116 188 8.4E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 Pfam PF02222 ATP-grasp domain 116 286 4.4E-54 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 Gene3D G3DSA:3.30.470.20 189 385 3.3E-57 T 11-10-2018 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 Gene3D G3DSA:3.40.50.20 1 115 6.3E-48 T 11-10-2018 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 SUPERFAMILY SSF56059 105 308 6.89E-57 T 11-10-2018 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 6 383 1.3E-180 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 SUPERFAMILY SSF52440 4 104 1.58E-29 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily ABE28_021170 edbabcfa24de0d27cbf1c0b6d510e712 385 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 1 384 50.295 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 ABE28_009480 e5929681cc6c77f0253b5f5f3646aed5 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 11 362 2.7E-55 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_009480 e5929681cc6c77f0253b5f5f3646aed5 369 Pfam PF03845 Spore germination protein 11 323 2.1E-78 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_007125 a0c86d888b9a345af9ec1f8602173130 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 64 1.0E-16 T 11-10-2018 IPR009907 Protein of unknown function DUF1447 ABE28_007125 a0c86d888b9a345af9ec1f8602173130 69 Gene3D G3DSA:3.10.20.730 1 58 4.9E-21 T 11-10-2018 ABE28_007125 a0c86d888b9a345af9ec1f8602173130 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 4.0E-24 T 11-10-2018 IPR009907 Protein of unknown function DUF1447 ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 SUPERFAMILY SSF46785 10 82 2.24E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 SUPERFAMILY SSF55781 84 249 2.12E-23 T 11-10-2018 ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 SMART SM00346 10 100 2.5E-20 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 Pfam PF01614 Bacterial transcriptional regulator 129 245 2.2E-5 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 Gene3D G3DSA:3.30.450.40 82 252 1.2E-19 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 Pfam PF09339 IclR helix-turn-helix domain 12 62 5.6E-11 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 ABE28_008465 a80d40f60e9a1c9ed7f319f9968c2e45 252 Gene3D G3DSA:1.10.10.10 7 81 1.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 SMART SM00862 156 233 1.9E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 SUPERFAMILY SSF46894 132 234 1.49E-31 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 1.3E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 Pfam PF00072 Response regulator receiver domain 7 115 7.5E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 SMART SM00448 5 115 1.6E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 Gene3D G3DSA:1.10.10.10 136 237 1.3E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 SUPERFAMILY SSF52172 3 126 6.4E-43 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_014480 d0c8f8f0e078e87f2e8af94ec8073b37 238 Gene3D G3DSA:3.40.50.2300 3 135 3.6E-41 T 11-10-2018 ABE28_013050 396c2160a1e25f44f9eb6e6200bf1ce3 184 SUPERFAMILY SSF55729 6 132 7.35E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_013050 396c2160a1e25f44f9eb6e6200bf1ce3 184 Pfam PF13302 Acetyltransferase (GNAT) domain 12 132 2.0E-13 T 11-10-2018 IPR000182 GNAT domain ABE28_013050 396c2160a1e25f44f9eb6e6200bf1ce3 184 Gene3D G3DSA:3.40.630.30 1 168 9.2E-21 T 11-10-2018 ABE28_019885 3298658d9936bb994f653ec96a820433 194 Gene3D G3DSA:3.40.50.880 1 192 1.8E-41 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_019885 3298658d9936bb994f653ec96a820433 194 SUPERFAMILY SSF52317 1 191 3.25E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_019885 3298658d9936bb994f653ec96a820433 194 Pfam PF01965 DJ-1/PfpI family 2 176 1.3E-29 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 212 6.1E-99 T 11-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 Gene3D G3DSA:3.20.20.70 1 212 2.9E-86 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 Hamap MF_00494 Probable transaldolase [tal]. 1 215 45.955 T 11-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 SUPERFAMILY SSF51569 1 214 3.66E-76 T 11-10-2018 ABE28_022965 320d64d684da710fa72a4bedbff04450 216 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 205 4.8E-55 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 ABE28_021660 3b3d7e570d134e291664eb66aedb98f5 88 Pfam PF11256 Protein of unknown function (DUF3055) 7 86 2.9E-38 T 11-10-2018 IPR021415 Protein of unknown function DUF3055 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 SUPERFAMILY SSF50249 1 64 1.44E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 SMART SM00357 3 66 1.1E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 PIRSF PIRSF002599 1 66 2.5E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.2E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 24 33 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 39 57 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 PRINTS PR00050 Cold shock protein signature 4 19 9.2E-19 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 Gene3D G3DSA:2.40.50.140 1 66 1.4E-30 T 11-10-2018 ABE28_000970 47401ae6451d5ea01ab6e85d742dfc1d 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 11-10-2018 IPR019844 Cold-shock conserved site ABE28_022065 6d602dc1adadd061224116d57e145f47 106 Gene3D G3DSA:1.10.10.10 1 106 1.6E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_022065 6d602dc1adadd061224116d57e145f47 106 SUPERFAMILY SSF46785 5 100 1.48E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_022065 6d602dc1adadd061224116d57e145f47 106 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 5.7E-23 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_021675 071002fa63d5a97430132ffb02fd6943 218 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 181 3.9E-26 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_006210 87aa157ffddac86ee98eb3e0cee5c1b0 247 PRINTS PR00114 Serine/threonine phosphatase family signature 2 29 3.1E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_006210 87aa157ffddac86ee98eb3e0cee5c1b0 247 PRINTS PR00114 Serine/threonine phosphatase family signature 40 67 3.1E-5 T 11-10-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 ABE28_006210 87aa157ffddac86ee98eb3e0cee5c1b0 247 SUPERFAMILY SSF56300 1 224 6.56E-38 T 11-10-2018 ABE28_006210 87aa157ffddac86ee98eb3e0cee5c1b0 247 Pfam PF00149 Calcineurin-like phosphoesterase 1 197 3.3E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 ABE28_006210 87aa157ffddac86ee98eb3e0cee5c1b0 247 Gene3D G3DSA:3.60.21.10 1 245 1.2E-58 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 SUPERFAMILY SSF47928 3 105 1.7E-23 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 Gene3D G3DSA:1.10.520.20 5 97 3.3E-12 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 3.3E-46 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 18.918 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 2.0E-45 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 PRINTS PR00125 ATP synthase delta subunit signature 6 25 2.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 PRINTS PR00125 ATP synthase delta subunit signature 136 151 2.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 PRINTS PR00125 ATP synthase delta subunit signature 151 169 2.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 PRINTS PR00125 ATP synthase delta subunit signature 85 99 2.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_022845 de2485e6b4d2a7553b8156c910ce74b6 178 PRINTS PR00125 ATP synthase delta subunit signature 74 85 2.5E-22 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 ABE28_003240 28eb4f2787cd90df1abd44151893cd46 561 Pfam PF05709 Phage tail protein 21 540 2.8E-28 T 11-10-2018 IPR008841 Siphovirus-type tail component ABE28_003240 28eb4f2787cd90df1abd44151893cd46 561 Gene3D G3DSA:2.40.30.200 1 138 4.4E-19 T 11-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily ABE28_003240 28eb4f2787cd90df1abd44151893cd46 561 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 7 135 1.9E-14 T 11-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal ABE28_002640 123c441f8eff40c604e834c508f5c199 368 Gene3D G3DSA:3.90.550.10 30 178 7.2E-33 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_002640 123c441f8eff40c604e834c508f5c199 368 SUPERFAMILY SSF53448 38 238 9.75E-36 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases ABE28_002640 123c441f8eff40c604e834c508f5c199 368 Pfam PF00535 Glycosyl transferase family 2 43 161 6.4E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 ABE28_002870 aeefda638ea0534c8d4fcbe4ddb4f55a 491 Pfam PF00474 Sodium:solute symporter family 35 428 2.9E-24 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_002870 aeefda638ea0534c8d4fcbe4ddb4f55a 491 Gene3D G3DSA:1.20.1730.10 21 490 3.9E-31 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_014535 52fbc0420d4c2e9acd0d69f399c6b1ee 162 Pfam PF13047 Protein of unknown function (DUF3907) 11 156 2.4E-61 T 11-10-2018 IPR025013 Protein of unknown function DUF3907 ABE28_012070 ff56f256c9ea2f43cde39efc84873f48 71 Pfam PF13046 Protein of unknown function (DUF3906) 1 64 2.7E-30 T 11-10-2018 IPR024998 Protein of unknown function DUF3906 ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 151 4.1E-33 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 178 300 1.7E-22 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 Gene3D G3DSA:1.10.1040.10 178 301 1.7E-29 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 Gene3D G3DSA:3.40.50.720 1 175 2.4E-44 T 11-10-2018 ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 SUPERFAMILY SSF48179 178 302 8.84E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 SUPERFAMILY SSF51735 2 126 2.87E-10 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_002455 c1c5a1c64b1079d222abb98a629b8931 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 300 9.4E-65 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 ABE28_002770 05906263ec9c6bc6e1e7b8732d963977 261 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 27 250 4.5E-104 T 11-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA ABE28_002770 05906263ec9c6bc6e1e7b8732d963977 261 Pfam PF01522 Polysaccharide deacetylase 58 180 4.6E-33 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_002770 05906263ec9c6bc6e1e7b8732d963977 261 SUPERFAMILY SSF88713 42 250 1.48E-63 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_002770 05906263ec9c6bc6e1e7b8732d963977 261 Gene3D G3DSA:3.20.20.370 19 254 3.7E-83 T 11-10-2018 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 353 1.8E-134 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 14 359 5.8E-135 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 Gene3D G3DSA:3.40.1690.10 224 360 3.0E-57 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 308 329 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 234 251 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 16 38 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 214 232 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 278 293 7.8E-41 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_008040 8e9b397b833fd871f6d5be3777226244 360 SUPERFAMILY SSF160544 250 357 6.02E-41 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_022475 77b9fdb8d1ebae59d984f620cfcbe0f9 230 SUPERFAMILY SSF53271 84 229 1.08E-27 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_022475 77b9fdb8d1ebae59d984f620cfcbe0f9 230 Gene3D G3DSA:3.40.50.2020 77 230 2.4E-22 T 11-10-2018 ABE28_022475 77b9fdb8d1ebae59d984f620cfcbe0f9 230 Pfam PF00156 Phosphoribosyl transferase domain 139 228 6.2E-10 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 169 4.5E-61 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 Pfam PF12698 ABC-2 family transporter protein 23 166 2.7E-12 T 11-10-2018 ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 Pfam PF12698 ABC-2 family transporter protein 727 934 2.7E-10 T 11-10-2018 ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 587 613 1.2E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 691 717 2.6E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 672 697 2.8E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 235 262 3.6E-6 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 174 199 1.9E-4 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 346 368 3.6E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 656 683 6.5E-5 T 11-10-2018 IPR023908 xxxLxxG heptad repeat ABE28_020265 ab33ad10f17f41c4d003e6d9f6bb23cc 951 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 737 941 9.8E-62 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_015475 65a65df876e2eeb97c7a84ec350e55dd 310 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 10 306 8.8E-72 T 11-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 ABE28_015475 65a65df876e2eeb97c7a84ec350e55dd 310 Pfam PF02690 Na+/Pi-cotransporter 13 145 1.3E-33 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ABE28_015475 65a65df876e2eeb97c7a84ec350e55dd 310 Pfam PF02690 Na+/Pi-cotransporter 157 284 1.3E-12 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 ABE28_012780 2295c0a76063e41cb82d75f62655f92b 326 Pfam PF12679 ABC-2 family transporter protein 3 325 8.5E-24 T 11-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 Pfam PF03466 LysR substrate binding domain 98 287 2.0E-37 T 11-10-2018 IPR005119 LysR, substrate-binding ABE28_018380 53ececde44614c726f63acab8c47aeab 302 SUPERFAMILY SSF46785 3 86 3.55E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_018380 53ececde44614c726f63acab8c47aeab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 Gene3D G3DSA:1.10.10.10 1 85 1.4E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018380 53ececde44614c726f63acab8c47aeab 302 SUPERFAMILY SSF53850 99 291 3.93E-36 T 11-10-2018 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 Gene3D G3DSA:3.40.190.290 93 296 3.6E-49 T 11-10-2018 ABE28_018380 53ececde44614c726f63acab8c47aeab 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 ABE28_009580 3594b421cf5083b023b66489060ce086 363 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 4 356 9.0E-54 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_009580 3594b421cf5083b023b66489060ce086 363 Pfam PF03845 Spore germination protein 5 315 2.0E-20 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_002205 d75b99b363e78a4f109ba054a14922a9 367 Pfam PF12704 MacB-like periplasmic core domain 20 210 2.4E-7 T 11-10-2018 IPR025857 MacB-like periplasmic core domain ABE28_002205 d75b99b363e78a4f109ba054a14922a9 367 Pfam PF02687 FtsX-like permease family 275 358 5.4E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_011260 9aa24c690e14356520dd009bc41d3465 249 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 19 248 3.0E-42 T 11-10-2018 ABE28_011260 9aa24c690e14356520dd009bc41d3465 249 Gene3D G3DSA:3.30.70.2720 127 249 7.8E-42 T 11-10-2018 ABE28_011260 9aa24c690e14356520dd009bc41d3465 249 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 4 239 1.3E-58 T 11-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 ABE28_015715 1615711afbe8d05c7b9cf5e5ff00c561 309 Pfam PF01136 Peptidase family U32 75 306 7.4E-67 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 ABE28_015715 1615711afbe8d05c7b9cf5e5ff00c561 309 SUPERFAMILY SSF102114 15 94 4.32E-6 T 11-10-2018 ABE28_009110 c03a631781d6eb7eb021bc629a2df8fd 397 SUPERFAMILY SSF52540 123 293 3.32E-9 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_009110 c03a631781d6eb7eb021bc629a2df8fd 397 Pfam PF01580 FtsK/SpoIIIE family 134 234 8.0E-15 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 ABE28_009110 c03a631781d6eb7eb021bc629a2df8fd 397 Gene3D G3DSA:3.40.50.300 109 370 5.3E-45 T 11-10-2018 ABE28_015455 f9c5c7f522f267f86bea38143a0e12d2 335 Hamap MF_01562 UPF0365 protein . 4 324 48.565 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity ABE28_015455 f9c5c7f522f267f86bea38143a0e12d2 335 Pfam PF12127 SigmaW regulon antibacterial 10 320 1.1E-160 T 11-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity ABE28_017185 503ed1ffd8ebc31a3e40a61946405b4c 260 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 242 2.6E-29 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_017185 503ed1ffd8ebc31a3e40a61946405b4c 260 SUPERFAMILY SSF161098 54 233 5.36E-28 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_017185 503ed1ffd8ebc31a3e40a61946405b4c 260 Gene3D G3DSA:1.10.3720.10 49 246 3.8E-23 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_016095 5fcff69c700dee5d202e090bae866458 259 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 255 1.2E-11 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal ABE28_016095 5fcff69c700dee5d202e090bae866458 259 SUPERFAMILY SSF52540 6 256 5.22E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016095 5fcff69c700dee5d202e090bae866458 259 Gene3D G3DSA:3.40.50.300 1 257 1.2E-64 T 11-10-2018 ABE28_016095 5fcff69c700dee5d202e090bae866458 259 SMART SM00382 32 232 1.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016095 5fcff69c700dee5d202e090bae866458 259 Pfam PF00005 ABC transporter 24 183 5.5E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_003825 c6313ea1001d051f7b594ef83f7effc7 260 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 250 6.6E-55 T 11-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related ABE28_013600 ffdab55a152da025b6f64efa9fc74103 301 Gene3D G3DSA:3.30.420.40 5 293 3.7E-63 T 11-10-2018 ABE28_013600 ffdab55a152da025b6f64efa9fc74103 301 SUPERFAMILY SSF53067 3 298 3.18E-46 T 11-10-2018 ABE28_013600 ffdab55a152da025b6f64efa9fc74103 301 Pfam PF00480 ROK family 5 293 1.2E-49 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_013600 ffdab55a152da025b6f64efa9fc74103 301 Gene3D G3DSA:3.30.420.40 129 281 3.7E-63 T 11-10-2018 ABE28_013475 f82a265d0652cd8d361d3375d652fc26 452 Pfam PF13751 Transposase DDE domain 324 441 3.9E-27 T 11-10-2018 IPR025668 Transposase DDE domain ABE28_013475 f82a265d0652cd8d361d3375d652fc26 452 Pfam PF05598 Transposase domain (DUF772) 52 127 5.5E-23 T 11-10-2018 IPR008490 Transposase InsH, N-terminal ABE28_011190 2e13118e79e37b25b79cfa4441c1a439 91 Gene3D G3DSA:1.10.443.10 1 86 1.5E-15 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_011190 2e13118e79e37b25b79cfa4441c1a439 91 Pfam PF00589 Phage integrase family 1 73 2.1E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_011190 2e13118e79e37b25b79cfa4441c1a439 91 SUPERFAMILY SSF56349 1 82 5.59E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 Gene3D G3DSA:3.40.30.10 1 158 2.0E-68 T 11-10-2018 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 SUPERFAMILY SSF52833 1 158 4.05E-60 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 Pfam PF00255 Glutathione peroxidase 3 109 7.5E-42 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 PRINTS PR01011 Glutathione peroxidase family signature 122 131 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 PRINTS PR01011 Glutathione peroxidase family signature 21 38 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 PRINTS PR01011 Glutathione peroxidase family signature 56 72 1.6E-19 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 PIRSF PIRSF000303 1 158 6.2E-67 T 11-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 ABE28_013450 4d61e0e08aba2afcf31fbf17891b8a45 158 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 11-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 ABE28_022800 36026ebbc90f53cfc3dc33eb60e21c58 335 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 15 332 24.656 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022800 36026ebbc90f53cfc3dc33eb60e21c58 335 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 216 229 - T 11-10-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022800 36026ebbc90f53cfc3dc33eb60e21c58 335 Pfam PF00146 NADH dehydrogenase 23 326 4.7E-124 T 11-10-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_019925 554b6290e3137ac9bc5bd0e94ba9843a 298 SUPERFAMILY SSF103481 183 283 1.7E-13 T 11-10-2018 ABE28_019925 554b6290e3137ac9bc5bd0e94ba9843a 298 SUPERFAMILY SSF103481 37 139 2.09E-13 T 11-10-2018 ABE28_019925 554b6290e3137ac9bc5bd0e94ba9843a 298 Pfam PF00892 EamA-like transporter family 150 279 2.0E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_019925 554b6290e3137ac9bc5bd0e94ba9843a 298 Pfam PF00892 EamA-like transporter family 6 136 2.4E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_002740 65322594cc170e608b7da4183d1e243e 270 Pfam PF14167 YfkD-like protein 39 270 1.2E-117 T 11-10-2018 IPR025548 YfkD-like protein ABE28_004030 c9467e9f04a38f7bb474e408c99757f2 101 Gene3D G3DSA:3.30.70.100 5 100 3.1E-5 T 11-10-2018 ABE28_004030 c9467e9f04a38f7bb474e408c99757f2 101 Pfam PF07978 NIPSNAP 6 99 1.3E-23 T 11-10-2018 IPR012577 NIPSNAP ABE28_004030 c9467e9f04a38f7bb474e408c99757f2 101 SUPERFAMILY SSF54909 2 99 7.33E-20 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_003940 6894cf59d33235204bde19a1758d5997 287 Gene3D G3DSA:3.20.20.150 1 283 3.3E-56 T 11-10-2018 ABE28_003940 6894cf59d33235204bde19a1758d5997 287 SUPERFAMILY SSF51658 21 281 1.31E-34 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_003940 6894cf59d33235204bde19a1758d5997 287 Pfam PF01261 Xylose isomerase-like TIM barrel 28 207 2.7E-16 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_012410 2e22a404aa5232aabb139ada512efbf5 134 SUPERFAMILY SSF47413 4 52 9.64E-5 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_012410 2e22a404aa5232aabb139ada512efbf5 134 Gene3D G3DSA:1.25.40.10 2 116 1.9E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_003475 a55d59d5da720fad869ff88d23054a0a 106 Pfam PF03551 Transcriptional regulator PadR-like family 14 84 9.6E-23 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_003475 a55d59d5da720fad869ff88d23054a0a 106 Gene3D G3DSA:1.10.10.10 1 104 2.0E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_003475 a55d59d5da720fad869ff88d23054a0a 106 SUPERFAMILY SSF46785 10 100 2.68E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010055 d09ec3780cef2dd3566a405471946c58 142 ProDom PD086666 YNEK BH2332 21 142 4.0E-48 T 11-10-2018 IPR020203 Uncharacterised protein family, YneK ABE28_010055 d09ec3780cef2dd3566a405471946c58 142 Pfam PF11084 Protein of unknown function (DUF2621) 4 141 1.1E-71 T 11-10-2018 IPR020203 Uncharacterised protein family, YneK ABE28_021335 bf4564bd5e9d3e429ebde97e90500127 117 Gene3D G3DSA:1.10.260.40 4 115 2.7E-17 T 11-10-2018 ABE28_021335 bf4564bd5e9d3e429ebde97e90500127 117 SUPERFAMILY SSF47413 2 66 1.05E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_021335 bf4564bd5e9d3e429ebde97e90500127 117 Pfam PF12844 Helix-turn-helix domain 6 65 1.4E-11 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_021335 bf4564bd5e9d3e429ebde97e90500127 117 SMART SM00530 7 62 2.4E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 Pfam PF00772 DnaB-like helicase N terminal domain 8 103 1.3E-25 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 Gene3D G3DSA:3.40.50.300 155 433 5.1E-64 T 11-10-2018 ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 SUPERFAMILY SSF52540 170 414 3.1E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 Gene3D G3DSA:1.10.860.10 5 154 1.6E-37 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 SUPERFAMILY SSF48024 8 111 1.12E-26 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 ABE28_003125 32c89e8cac658f3427ef11f726e6b29a 433 Pfam PF03796 DnaB-like helicase C terminal domain 172 424 7.5E-55 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 ABE28_009155 948b35a8324285740b1419c2ec67b364 164 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 5 155 2.6E-13 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 ABE28_009155 948b35a8324285740b1419c2ec67b364 164 Gene3D G3DSA:1.10.10.10 88 156 7.7E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009155 948b35a8324285740b1419c2ec67b364 164 SUPERFAMILY SSF88659 78 155 5.45E-12 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_009155 948b35a8324285740b1419c2ec67b364 164 Pfam PF08281 Sigma-70, region 4 99 152 4.5E-14 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 ABE28_013470 cb34e98387e17c9615d9b3179450347d 231 Pfam PF08241 Methyltransferase domain 53 146 1.0E-21 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABE28_013470 cb34e98387e17c9615d9b3179450347d 231 Gene3D G3DSA:3.40.50.150 26 230 3.2E-51 T 11-10-2018 ABE28_013470 cb34e98387e17c9615d9b3179450347d 231 SUPERFAMILY SSF53335 8 192 1.18E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024130 ecdc0460a4a55541afae4ba35c626075 116 SUPERFAMILY SSF46785 1 105 5.85E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_024130 ecdc0460a4a55541afae4ba35c626075 116 Pfam PF01638 HxlR-like helix-turn-helix 17 103 3.6E-37 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type ABE28_024130 ecdc0460a4a55541afae4ba35c626075 116 Gene3D G3DSA:1.10.10.10 1 116 2.0E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_006450 c7ea0b9aa466e24ea4f9fda6f99d6c50 282 Gene3D G3DSA:1.10.3720.10 2 268 5.1E-63 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006450 c7ea0b9aa466e24ea4f9fda6f99d6c50 282 SUPERFAMILY SSF161098 7 282 8.9E-68 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_006450 c7ea0b9aa466e24ea4f9fda6f99d6c50 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 271 1.1E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_000960 8895643d0ffa790377d432ad9121e1d4 389 SUPERFAMILY SSF56059 99 292 5.48E-24 T 11-10-2018 ABE28_000960 8895643d0ffa790377d432ad9121e1d4 389 Gene3D G3DSA:3.30.470.20 82 360 1.6E-31 T 11-10-2018 ABE28_000960 8895643d0ffa790377d432ad9121e1d4 389 Pfam PF13535 ATP-grasp domain 119 277 2.2E-52 T 11-10-2018 ABE28_018875 f9334929085a615456c761654895c560 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 2.1E-13 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ABE28_018875 f9334929085a615456c761654895c560 89 SMART SM00894 33 88 1.6E-4 T 11-10-2018 IPR008613 Excalibur calcium-binding domain ABE28_002710 b2d80dd77ed9257246d808fa23f856db 74 Hamap MF_00829 UPF0435 protein . 6 73 18.31 T 11-10-2018 IPR009507 Protein of unknown function UPF0435 ABE28_002710 b2d80dd77ed9257246d808fa23f856db 74 Pfam PF06569 Protein of unknown function (DUF1128) 3 72 3.6E-30 T 11-10-2018 IPR009507 Protein of unknown function UPF0435 ABE28_010305 071592340c558bb78ab978dc734ce3f3 115 Gene3D G3DSA:1.20.58.1000 9 114 5.4E-30 T 11-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily ABE28_010305 071592340c558bb78ab978dc734ce3f3 115 Pfam PF02583 Metal-sensitive transcriptional repressor 33 111 1.9E-27 T 11-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 ABE28_015850 aa35f622f5168db00e2a5bef664f0c40 161 PIRSF PIRSF019083 1 161 4.5E-42 T 11-10-2018 IPR016747 Phosphotransbutyrylase ABE28_015850 aa35f622f5168db00e2a5bef664f0c40 161 Pfam PF04892 VanZ like family 9 153 1.2E-18 T 11-10-2018 IPR006976 VanZ-like ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 124 134 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 SUPERFAMILY SSF143975 4 378 7.59E-142 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 6 560 47.559 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 468 479 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 Pfam PF00920 Dehydratase family 36 556 8.3E-227 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 19 560 7.2E-257 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 Gene3D G3DSA:3.50.30.80 379 531 6.5E-54 T 11-10-2018 ABE28_013425 8964ee67b7805b25567ec0417dfda1ac 561 SUPERFAMILY SSF52016 379 560 8.63E-60 T 11-10-2018 ABE28_012045 fc6cf6cdddad6ff0f9b63b2a9ce43f2e 378 SUPERFAMILY SSF53756 7 364 8.37E-51 T 11-10-2018 ABE28_012045 fc6cf6cdddad6ff0f9b63b2a9ce43f2e 378 Pfam PF00534 Glycosyl transferases group 1 174 302 2.0E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_012045 fc6cf6cdddad6ff0f9b63b2a9ce43f2e 378 Gene3D G3DSA:3.40.50.2000 1 172 1.4E-28 T 11-10-2018 ABE28_012045 fc6cf6cdddad6ff0f9b63b2a9ce43f2e 378 Gene3D G3DSA:3.40.50.2000 173 334 4.0E-18 T 11-10-2018 ABE28_012045 fc6cf6cdddad6ff0f9b63b2a9ce43f2e 378 Pfam PF13439 Glycosyltransferase Family 4 13 163 7.2E-23 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_013565 c5510ea2886ffdb401b8cd1f56019bd1 282 SUPERFAMILY SSF161098 6 274 9.27E-61 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013565 c5510ea2886ffdb401b8cd1f56019bd1 282 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 270 3.6E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_013565 c5510ea2886ffdb401b8cd1f56019bd1 282 Gene3D G3DSA:1.10.3720.10 1 271 2.5E-59 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_004565 b2b126f275b912ad4ca6f087bebda171 249 SUPERFAMILY SSF55469 2 247 1.83E-68 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_004565 b2b126f275b912ad4ca6f087bebda171 249 Gene3D G3DSA:3.40.109.10 1 249 3.2E-75 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_004565 b2b126f275b912ad4ca6f087bebda171 249 Pfam PF00881 Nitroreductase family 8 165 1.1E-22 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_004565 b2b126f275b912ad4ca6f087bebda171 249 PIRSF PIRSF005426 1 249 4.0E-87 T 11-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 ABE28_008785 7d69116828ef72e071fafd4dbd69853f 123 SUPERFAMILY SSF54060 53 109 2.71E-7 T 11-10-2018 ABE28_008785 7d69116828ef72e071fafd4dbd69853f 123 Gene3D G3DSA:3.90.75.20 11 112 5.1E-5 T 11-10-2018 ABE28_004880 606c52efe8e473476bc8be776c7a3030 293 Pfam PF13186 Iron-sulfur cluster-binding domain 220 285 5.4E-14 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain ABE28_004880 606c52efe8e473476bc8be776c7a3030 293 SUPERFAMILY SSF102114 3 287 8.5E-36 T 11-10-2018 ABE28_004880 606c52efe8e473476bc8be776c7a3030 293 Pfam PF04055 Radical SAM superfamily 9 146 1.9E-12 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 Gene3D G3DSA:3.30.70.860 6 163 1.3E-60 T 11-10-2018 IPR035571 UPF0234-like, C-terminal ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 SUPERFAMILY SSF89963 5 90 3.4E-29 T 11-10-2018 IPR036183 YajQ-like superfamily ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 7.3E-61 T 11-10-2018 IPR007551 Protein of unknown function DUF520 ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 SUPERFAMILY SSF89963 92 163 2.56E-25 T 11-10-2018 IPR036183 YajQ-like superfamily ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.188 T 11-10-2018 IPR007551 Protein of unknown function DUF520 ABE28_005965 b7dbf6575505d1b6e7ed104aa0c840f0 163 Gene3D G3DSA:3.30.70.990 12 101 1.3E-60 T 11-10-2018 IPR035570 UPF0234, N-terminal ABE28_008160 5b7ad96355bd47d8914078e6af257bd1 101 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 96 7.0E-19 T 11-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 ABE28_008160 5b7ad96355bd47d8914078e6af257bd1 101 Gene3D G3DSA:3.30.1330.30 1 101 1.1E-38 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_008160 5b7ad96355bd47d8914078e6af257bd1 101 SUPERFAMILY SSF55315 5 100 5.89E-26 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like ABE28_021575 0296a0e5e27efc44fac37aa12de27798 213 Pfam PF13460 NAD(P)H-binding 7 189 4.7E-42 T 11-10-2018 IPR016040 NAD(P)-binding domain ABE28_021575 0296a0e5e27efc44fac37aa12de27798 213 Gene3D G3DSA:3.40.50.720 1 213 3.3E-51 T 11-10-2018 ABE28_021575 0296a0e5e27efc44fac37aa12de27798 213 SUPERFAMILY SSF51735 1 201 2.88E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_007470 a5b59de9c6a5fad5aaca39d1967bbdce 541 PIRSF PIRSF012535 1 541 3.9E-188 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC ABE28_007470 a5b59de9c6a5fad5aaca39d1967bbdce 541 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 12 539 1.6E-181 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC ABE28_007470 a5b59de9c6a5fad5aaca39d1967bbdce 541 Pfam PF10079 Bacillithiol biosynthesis BshC 1 537 9.9E-172 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC ABE28_007470 a5b59de9c6a5fad5aaca39d1967bbdce 541 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 541 30.889 T 11-10-2018 IPR011199 Bacillithiol biosynthesis BshC ABE28_013045 96feec37bea3d0e36ca540dcdb10c52a 259 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 254 16.445 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABE28_013045 96feec37bea3d0e36ca540dcdb10c52a 259 Pfam PF02673 Bacitracin resistance protein BacA 6 249 1.9E-70 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 ABE28_000950 8c47ba36ee7d709ba23e90cb798ee259 478 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 11 478 1.7E-264 T 11-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 ABE28_000950 8c47ba36ee7d709ba23e90cb798ee259 478 Gene3D G3DSA:3.30.1330.120 283 421 2.9E-188 T 11-10-2018 ABE28_000950 8c47ba36ee7d709ba23e90cb798ee259 478 SUPERFAMILY SSF103378 13 477 7.98E-156 T 11-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 ABE28_000950 8c47ba36ee7d709ba23e90cb798ee259 478 Pfam PF03972 MmgE/PrpD family 15 458 5.9E-150 T 11-10-2018 IPR005656 MmgE/PrpD GO:0016829 ABE28_000950 8c47ba36ee7d709ba23e90cb798ee259 478 Gene3D G3DSA:1.10.4100.10 20 456 2.9E-188 T 11-10-2018 ABE28_012130 719f722f9f0632b5d3465019576a31a9 340 SUPERFAMILY SSF51679 14 335 3.89E-88 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_012130 719f722f9f0632b5d3465019576a31a9 340 Pfam PF00296 Luciferase-like monooxygenase 30 310 2.8E-43 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_012130 719f722f9f0632b5d3465019576a31a9 340 Gene3D G3DSA:3.20.20.30 10 340 1.3E-103 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_012130 719f722f9f0632b5d3465019576a31a9 340 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 16 335 6.5E-137 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_010930 50dc91f6d89ce743b3f0d838b1b6495f 494 PIRSF PIRSF005690 2 484 9.4E-141 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_010930 50dc91f6d89ce743b3f0d838b1b6495f 494 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 18 468 1.1E-147 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_015905 68de988d6964c0f24630e58f48ac594e 212 Pfam PF02397 Bacterial sugar transferase 27 206 5.8E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase ABE28_014300 d3e96dce3ef0ae985e695871e7eb89d7 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 1.6E-263 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 ABE28_014300 d3e96dce3ef0ae985e695871e7eb89d7 492 SUPERFAMILY SSF52540 19 232 1.75E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_014300 d3e96dce3ef0ae985e695871e7eb89d7 492 Gene3D G3DSA:3.40.50.300 12 235 9.0E-9 T 11-10-2018 ABE28_014300 d3e96dce3ef0ae985e695871e7eb89d7 492 PIRSF PIRSF007466 1 492 1.9E-266 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 ABE28_014300 d3e96dce3ef0ae985e695871e7eb89d7 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 2.4E-225 T 11-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 ABE28_010650 07c7b48631728d30262c39b512089f14 194 Pfam PF09819 ABC-type cobalt transport system, permease component 9 124 6.0E-37 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted ABE28_010650 07c7b48631728d30262c39b512089f14 194 PIRSF PIRSF037394 1 191 3.2E-61 T 11-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted ABE28_010170 9ef454cf569748baf7379e7d87fc0c9e 75 Gene3D G3DSA:3.30.110.40 1 75 2.4E-26 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_010170 9ef454cf569748baf7379e7d87fc0c9e 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 7 31 - T 11-10-2018 IPR001455 TusA-like domain ABE28_010170 9ef454cf569748baf7379e7d87fc0c9e 75 Pfam PF01206 Sulfurtransferase TusA 5 74 1.6E-20 T 11-10-2018 IPR001455 TusA-like domain ABE28_010170 9ef454cf569748baf7379e7d87fc0c9e 75 SUPERFAMILY SSF64307 4 75 3.01E-22 T 11-10-2018 IPR036868 TusA-like domain superfamily ABE28_010075 5c00081aff7a39fd47413052b2422d6b 182 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 1.3E-31 T 11-10-2018 IPR000182 GNAT domain ABE28_010075 5c00081aff7a39fd47413052b2422d6b 182 SUPERFAMILY SSF55729 9 179 2.45E-47 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_010075 5c00081aff7a39fd47413052b2422d6b 182 Gene3D G3DSA:3.40.630.30 4 179 1.9E-48 T 11-10-2018 ABE28_020380 fcbe3ae41ae0a1a77c07c8b4fa6099ac 185 Gene3D G3DSA:3.30.460.10 1 170 1.1E-58 T 11-10-2018 ABE28_020380 fcbe3ae41ae0a1a77c07c8b4fa6099ac 185 Pfam PF04229 GrpB protein 5 165 7.0E-54 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase ABE28_020380 fcbe3ae41ae0a1a77c07c8b4fa6099ac 185 SUPERFAMILY SSF81301 7 168 1.86E-52 T 11-10-2018 ABE28_002970 0a047b87f17133ad1329f58fa82fdfdd 165 Pfam PF07849 Protein of unknown function (DUF1641) 121 154 1.3E-6 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 ABE28_016935 cdb0154afa3695e0497aa5ec80d2e17e 341 Pfam PF01145 SPFH domain / Band 7 family 30 217 4.6E-26 T 11-10-2018 IPR001107 Band 7 domain ABE28_016935 cdb0154afa3695e0497aa5ec80d2e17e 341 TIGRFAM TIGR01933 hflK: HflK protein 29 302 1.6E-68 T 11-10-2018 IPR010201 HflK GO:0016021 ABE28_016935 cdb0154afa3695e0497aa5ec80d2e17e 341 Gene3D G3DSA:3.30.479.30 85 192 1.9E-21 T 11-10-2018 ABE28_016935 cdb0154afa3695e0497aa5ec80d2e17e 341 SMART SM00244 26 202 2.1E-25 T 11-10-2018 IPR001107 Band 7 domain ABE28_016935 cdb0154afa3695e0497aa5ec80d2e17e 341 SUPERFAMILY SSF117892 60 195 1.29E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily ABE28_013785 063dc090fb37bdc45f50e9230bc45d0d 450 Pfam PF00324 Amino acid permease 18 409 3.0E-40 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_013785 063dc090fb37bdc45f50e9230bc45d0d 450 Gene3D G3DSA:1.20.1740.10 7 445 7.7E-75 T 11-10-2018 ABE28_013785 063dc090fb37bdc45f50e9230bc45d0d 450 PIRSF PIRSF006060 2 448 1.0E-76 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_003130 c741115f4373c2404d57dfc67e0d55a0 195 SUPERFAMILY SSF53098 1 151 9.86E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_003130 c741115f4373c2404d57dfc67e0d55a0 195 Gene3D G3DSA:3.30.420.10 1 155 1.0E-14 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_019150 c79114e623fb5cd5b4147f8c382d3416 70 Pfam PF13076 Fur-regulated basic protein A 10 43 9.8E-16 T 11-10-2018 IPR025072 Fur-regulated basic protein A ABE28_015680 a970ea4439f760252a5f8859dfd57305 212 Hamap MF_02100 Uncharacterized methyltransferase . 2 212 43.213 T 11-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 ABE28_015680 a970ea4439f760252a5f8859dfd57305 212 Pfam PF13649 Methyltransferase domain 49 139 3.8E-14 T 11-10-2018 ABE28_015680 a970ea4439f760252a5f8859dfd57305 212 SUPERFAMILY SSF53335 7 196 2.54E-31 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_015680 a970ea4439f760252a5f8859dfd57305 212 Gene3D G3DSA:3.40.50.150 24 212 1.3E-47 T 11-10-2018 ABE28_022460 47485cdfb16361189e13693d36efa7d6 162 SUPERFAMILY SSF140566 1 135 1.07E-15 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 ABE28_022460 47485cdfb16361189e13693d36efa7d6 162 Pfam PF05130 FlgN protein 1 146 5.5E-23 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 ABE28_022460 47485cdfb16361189e13693d36efa7d6 162 Gene3D G3DSA:1.20.58.300 2 135 7.0E-7 T 11-10-2018 ABE28_022195 bb6df1d4f4604d57c9ace9f749e4dad8 152 PRINTS PR00502 NUDIX hydrolase family signature 40 55 5.4E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_022195 bb6df1d4f4604d57c9ace9f749e4dad8 152 PRINTS PR00502 NUDIX hydrolase family signature 26 40 5.4E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_022195 bb6df1d4f4604d57c9ace9f749e4dad8 152 SUPERFAMILY SSF55811 4 134 1.9E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_022195 bb6df1d4f4604d57c9ace9f749e4dad8 152 Pfam PF00293 NUDIX domain 6 123 1.3E-18 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_022195 bb6df1d4f4604d57c9ace9f749e4dad8 152 Gene3D G3DSA:3.90.79.10 1 152 1.1E-41 T 11-10-2018 ABE28_010445 f045d260326e321994ebc3173ec7c12d 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 265 5.6E-18 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_010445 f045d260326e321994ebc3173ec7c12d 325 SUPERFAMILY SSF54593 2 303 5.14E-46 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_010445 f045d260326e321994ebc3173ec7c12d 325 Gene3D G3DSA:3.10.180.10 66 217 6.2E-110 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_010445 f045d260326e321994ebc3173ec7c12d 325 Gene3D G3DSA:3.10.180.10 5 309 6.2E-110 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_000305 35b40281c7ca157d60d7c10f4710f0db 210 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 128 4.2E-44 T 11-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ ABE28_000305 35b40281c7ca157d60d7c10f4710f0db 210 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 2.3E-21 T 11-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like ABE28_013095 5fd4e2a86742fbed3e1ce6fca5eae9a0 148 Pfam PF13115 YtkA-like 26 105 5.4E-12 T 11-10-2018 IPR032693 YtkA-like domain ABE28_016710 4ca42c735641499a14e603b1533544f6 195 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 2.7E-59 T 11-10-2018 IPR013570 Transcription regulator YsiA, C-terminal ABE28_016710 4ca42c735641499a14e603b1533544f6 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 2.0E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 Gene3D G3DSA:1.10.357.10 50 194 1.0E-35 T 11-10-2018 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 Gene3D G3DSA:1.10.10.60 1 49 1.3E-21 T 11-10-2018 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 SUPERFAMILY SSF46689 4 79 4.42E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 5.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 5.6E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_016710 4ca42c735641499a14e603b1533544f6 195 SUPERFAMILY SSF48498 78 191 6.99E-26 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily ABE28_013150 9119d0906a84cdfb2215174cdaee3cd0 390 Gene3D G3DSA:3.40.640.10 45 286 6.8E-116 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_013150 9119d0906a84cdfb2215174cdaee3cd0 390 Pfam PF00155 Aminotransferase class I and II 34 384 1.9E-67 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_013150 9119d0906a84cdfb2215174cdaee3cd0 390 SUPERFAMILY SSF53383 7 387 2.31E-103 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_013150 9119d0906a84cdfb2215174cdaee3cd0 390 Gene3D G3DSA:3.90.1150.10 29 384 6.8E-116 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_015135 eb73ab237e9dcbc71e0eb3c83531e0e5 126 SUPERFAMILY SSF52833 4 117 1.07E-28 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_015135 eb73ab237e9dcbc71e0eb3c83531e0e5 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 115 6.1E-32 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR ABE28_015135 eb73ab237e9dcbc71e0eb3c83531e0e5 126 Gene3D G3DSA:3.40.30.10 4 121 9.4E-33 T 11-10-2018 ABE28_015135 eb73ab237e9dcbc71e0eb3c83531e0e5 126 Pfam PF03960 ArsC family 20 113 8.5E-14 T 11-10-2018 IPR006660 Arsenate reductase-like ABE28_007820 119096c96d1d575287940d351513e8a0 110 Hamap MF_00245 UPF0122 protein . 2 103 21.361 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like ABE28_007820 119096c96d1d575287940d351513e8a0 110 SUPERFAMILY SSF88659 1 97 3.74E-33 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like ABE28_007820 119096c96d1d575287940d351513e8a0 110 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 98 5.6E-39 T 11-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like ABE28_007820 119096c96d1d575287940d351513e8a0 110 Gene3D G3DSA:1.10.10.10 1 110 7.4E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_012135 d7e0ebaa3a7abcf154d99789776a41e2 329 Pfam PF00296 Luciferase-like monooxygenase 2 295 6.5E-37 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_012135 d7e0ebaa3a7abcf154d99789776a41e2 329 SUPERFAMILY SSF51679 1 326 4.19E-68 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_012135 d7e0ebaa3a7abcf154d99789776a41e2 329 Gene3D G3DSA:3.20.20.30 1 327 3.4E-96 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_012135 d7e0ebaa3a7abcf154d99789776a41e2 329 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 324 3.5E-107 T 11-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 ABE28_017715 cb6407a542f33cbabd12841b074ab6d6 103 SUPERFAMILY SSF52821 3 96 9.56E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_017715 cb6407a542f33cbabd12841b074ab6d6 103 Gene3D G3DSA:3.40.250.10 5 100 2.4E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily ABE28_017715 cb6407a542f33cbabd12841b074ab6d6 103 Pfam PF00581 Rhodanese-like domain 8 97 1.7E-12 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_017715 cb6407a542f33cbabd12841b074ab6d6 103 SMART SM00450 8 102 3.0E-14 T 11-10-2018 IPR001763 Rhodanese-like domain ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 Pfam PF01063 Amino-transferase class IV 70 312 6.5E-33 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 Gene3D G3DSA:3.30.470.10 25 352 2.0E-135 T 11-10-2018 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 PIRSF PIRSF006468 1 358 1.1E-135 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 Gene3D G3DSA:3.20.10.10 171 339 2.0E-135 T 11-10-2018 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 SUPERFAMILY SSF56752 12 353 6.15E-114 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 ABE28_012185 7c8e1e95238e374b3cc5f42bc09dab63 362 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 1.8E-121 T 11-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 ABE28_005080 70472704ef5fda7b11019466c59a0afb 420 PIRSF PIRSF000524 5 410 3.7E-131 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 ABE28_005080 70472704ef5fda7b11019466c59a0afb 420 Gene3D G3DSA:3.90.1150.10 9 386 2.3E-143 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_005080 70472704ef5fda7b11019466c59a0afb 420 Pfam PF00266 Aminotransferase class-V 36 354 1.3E-29 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_005080 70472704ef5fda7b11019466c59a0afb 420 Gene3D G3DSA:3.40.640.10 22 284 2.3E-143 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_005080 70472704ef5fda7b11019466c59a0afb 420 SUPERFAMILY SSF53383 10 388 1.55E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_009470 6c486a2d99f6277f32ec84079ff63d48 434 SUPERFAMILY SSF46785 381 432 9.1E-5 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004900 71a5e65f223aa0d25236564cd1a46146 471 Pfam PF04293 SpoVR like protein 5 410 5.1E-163 T 11-10-2018 IPR007390 Sporulation stage V, protein R ABE28_023575 9ae82db878ce27b3150ed8042a80f917 600 Gene3D G3DSA:1.10.510.40 378 554 5.0E-11 T 11-10-2018 ABE28_023575 9ae82db878ce27b3150ed8042a80f917 600 Pfam PF06276 Ferric iron reductase FhuF-like transporter 412 573 2.7E-34 T 11-10-2018 IPR022770 Ferric iron reductase FhuF domain ABE28_023575 9ae82db878ce27b3150ed8042a80f917 600 Pfam PF04183 IucA / IucC family 145 381 1.3E-54 T 11-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 ABE28_020355 fcf38d0941e79ad622424d2ab7f2a1a1 126 Gene3D G3DSA:1.10.10.10 6 124 4.2E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020355 fcf38d0941e79ad622424d2ab7f2a1a1 126 SUPERFAMILY SSF46785 2 84 5.61E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020355 fcf38d0941e79ad622424d2ab7f2a1a1 126 SMART SM00345 13 72 5.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_020355 fcf38d0941e79ad622424d2ab7f2a1a1 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 66 1.8E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:2.60.40.2560 594 672 5.7E-19 T 11-10-2018 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:3.30.10.20 454 521 1.4E-11 T 11-10-2018 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:3.30.10.20 525 590 1.5E-16 T 11-10-2018 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:3.30.10.20 382 453 2.9E-17 T 11-10-2018 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Pfam PF03793 PASTA domain 388 449 6.8E-12 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Pfam PF03793 PASTA domain 540 587 1.4E-12 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Pfam PF03793 PASTA domain 460 519 5.3E-12 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 SMART SM00740 452 519 3.5E-6 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 SMART SM00740 520 587 2.4E-10 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 SMART SM00740 384 451 7.6E-14 T 11-10-2018 IPR005543 PASTA domain ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 SMART SM00220 11 268 7.3E-66 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 SUPERFAMILY SSF56112 7 269 2.7E-82 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Pfam PF00069 Protein kinase domain 11 257 1.5E-54 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:3.30.200.20 1 90 2.7E-33 T 11-10-2018 ABE28_007720 3f8c0fd71ff24e45681df21dad75f132 674 Gene3D G3DSA:1.10.510.10 92 278 8.3E-54 T 11-10-2018 ABE28_003400 77bd05518b35673bb15c9333c7345219 136 Pfam PF13673 Acetyltransferase (GNAT) domain 20 122 1.3E-11 T 11-10-2018 IPR000182 GNAT domain ABE28_003400 77bd05518b35673bb15c9333c7345219 136 SUPERFAMILY SSF55729 10 124 6.38E-17 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003400 77bd05518b35673bb15c9333c7345219 136 Gene3D G3DSA:3.40.630.30 5 129 1.8E-16 T 11-10-2018 ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 Pfam PF00107 Zinc-binding dehydrogenase 159 286 1.1E-23 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 Gene3D G3DSA:3.40.50.720 127 303 3.9E-135 T 11-10-2018 ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 SUPERFAMILY SSF51735 125 299 2.56E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 Pfam PF16884 N-terminal domain of oxidoreductase 8 112 5.4E-40 T 11-10-2018 ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 SUPERFAMILY SSF50129 6 144 2.19E-41 T 11-10-2018 IPR011032 GroES-like superfamily ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 Gene3D G3DSA:3.90.180.10 11 332 3.9E-135 T 11-10-2018 ABE28_004530 e7301480516f4fa806f62dcd8ba186bd 342 SMART SM00829 19 332 1.6E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 ABE28_018890 4603b20b76cb138cbbdf53d41d824d35 366 Pfam PF14072 DNA-sulfur modification-associated 14 335 2.3E-25 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB ABE28_018890 4603b20b76cb138cbbdf53d41d824d35 366 TIGRFAM TIGR03187 DGQHR: DGQHR domain 27 289 1.3E-20 T 11-10-2018 IPR017601 DGQHR-containing domain ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 Pfam PF00202 Aminotransferase class-III 31 442 3.1E-106 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 Gene3D G3DSA:3.40.640.10 66 336 2.3E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 PIRSF PIRSF000521 6 446 1.3E-34 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 SUPERFAMILY SSF53383 13 445 1.86E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_012275 ffee20f4ff7cb636c0a32857139f9cf2 446 Gene3D G3DSA:3.90.1150.10 14 443 2.3E-148 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_011535 0860754a6325047e9c4e10eb819e4d87 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 418 1.2E-106 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit ABE28_011535 0860754a6325047e9c4e10eb819e4d87 427 PIRSF PIRSF006066 1 427 1.6E-129 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 ABE28_011535 0860754a6325047e9c4e10eb819e4d87 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 423 1.6E-120 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 SUPERFAMILY SSF75217 1 243 1.24E-102 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 Gene3D G3DSA:1.10.1270.20 165 244 3.2E-31 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 231 3.2E-103 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 PIRSF PIRSF000386 1 244 7.3E-104 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 6.9E-73 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 Gene3D G3DSA:3.40.1280.10 1 164 6.5E-70 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal ABE28_007850 a04f21196ea48b10e7eff9e28a1c5edd 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 112.649 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 ABE28_017430 0a3ec9f872dcdcaecb602953bf470b74 91 Pfam PF14165 YtzH-like protein 3 88 3.8E-38 T 11-10-2018 IPR025547 YtzH-like protein ABE28_015990 291b72eafdad88812ce7ed395dc7a13d 449 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 344 425 5.1E-14 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain ABE28_015990 291b72eafdad88812ce7ed395dc7a13d 449 Pfam PF01943 Polysaccharide biosynthesis protein 22 283 2.9E-21 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_012445 73b72cfdc52bf3d2ba848b4594a2494a 469 PIRSF PIRSF006060 1 467 1.6E-74 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_012445 73b72cfdc52bf3d2ba848b4594a2494a 469 Gene3D G3DSA:1.20.1740.10 11 467 3.2E-68 T 11-10-2018 ABE28_012445 73b72cfdc52bf3d2ba848b4594a2494a 469 Pfam PF00324 Amino acid permease 20 448 3.5E-111 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_012445 73b72cfdc52bf3d2ba848b4594a2494a 469 ProSitePatterns PS00218 Amino acid permeases signature. 45 75 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 Pfam PF00437 Type II/IV secretion system protein 11 275 5.0E-68 T 11-10-2018 IPR001482 Type II/IV secretion system protein ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 SUPERFAMILY SSF52540 5 282 8.15E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 11-10-2018 IPR001482 Type II/IV secretion system protein ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 Gene3D G3DSA:3.30.450.90 2 108 6.8E-27 T 11-10-2018 ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 Gene3D G3DSA:3.40.50.300 110 335 3.1E-64 T 11-10-2018 ABE28_015130 2607b9522cc6b18e1581f8955b11db22 351 SMART SM00382 136 258 3.5E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_022980 cdae0de7b83379cee73f9c9df16507e9 177 Pfam PF10740 Domain of unknown function (DUF2529) 1 169 2.2E-62 T 11-10-2018 IPR019676 Domain of unknown function (DUF2529) ABE28_022980 cdae0de7b83379cee73f9c9df16507e9 177 Gene3D G3DSA:3.40.50.10490 1 173 3.8E-59 T 11-10-2018 ABE28_023245 01cd8981b374fd0ce601dfc8ff31eabf 187 SUPERFAMILY SSF52540 7 186 2.24E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023245 01cd8981b374fd0ce601dfc8ff31eabf 187 Gene3D G3DSA:3.40.50.300 6 186 9.8E-43 T 11-10-2018 ABE28_023245 01cd8981b374fd0ce601dfc8ff31eabf 187 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 8 184 1.3E-38 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABE28_023245 01cd8981b374fd0ce601dfc8ff31eabf 187 PIRSF PIRSF006135 5 187 7.0E-41 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 ABE28_005730 aafeb3b919db6378aecf3f0c7d208d66 122 Pfam PF12732 YtxH-like protein 7 80 3.5E-12 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH ABE28_006155 17bd782f247d9c43e2af22ec5a60c7f1 403 PIRSF PIRSF007487 1 388 6.3E-79 T 11-10-2018 IPR021176 Competence-induced protein CoiA ABE28_006155 17bd782f247d9c43e2af22ec5a60c7f1 403 Pfam PF06054 Competence protein CoiA-like family 1 220 6.4E-61 T 11-10-2018 IPR010330 Competence-induced protein CoiA-like ABE28_005115 a766b84caaad290100792b41a4c7ac42 101 Pfam PF07110 EthD domain 13 88 3.8E-11 T 11-10-2018 IPR009799 EthD domain ABE28_005115 a766b84caaad290100792b41a4c7ac42 101 TIGRFAM TIGR02118 TIGR02118: conserved hypothetical protein 1 100 1.2E-33 T 11-10-2018 IPR009799 EthD domain ABE28_005115 a766b84caaad290100792b41a4c7ac42 101 Gene3D G3DSA:3.30.70.100 1 101 8.4E-41 T 11-10-2018 ABE28_005115 a766b84caaad290100792b41a4c7ac42 101 SUPERFAMILY SSF54909 1 100 2.38E-24 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_019940 bb133fca0386f8cc823636c0602746cd 318 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 155 4.0E-9 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain ABE28_019940 bb133fca0386f8cc823636c0602746cd 318 Gene3D G3DSA:3.40.50.720 1 182 1.4E-13 T 11-10-2018 ABE28_016885 a68feabe8f9dd013371c7474b7890ac5 312 SUPERFAMILY SSF52540 127 278 4.22E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016885 a68feabe8f9dd013371c7474b7890ac5 312 Gene3D G3DSA:3.40.50.300 108 305 4.9E-53 T 11-10-2018 ABE28_016885 a68feabe8f9dd013371c7474b7890ac5 312 SMART SM00382 162 302 2.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016885 a68feabe8f9dd013371c7474b7890ac5 312 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 1.6E-27 T 11-10-2018 IPR009928 Primosomal DnaI, N-terminal ABE28_016885 a68feabe8f9dd013371c7474b7890ac5 312 Pfam PF01695 IstB-like ATP binding protein 149 273 5.8E-10 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ABE28_006705 cc1a6a32979c31e9ca4ac517376b6d0e 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 126 6.0E-18 T 11-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain ABE28_006705 cc1a6a32979c31e9ca4ac517376b6d0e 140 Gene3D G3DSA:2.30.110.10 3 137 2.5E-39 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 ABE28_006705 cc1a6a32979c31e9ca4ac517376b6d0e 140 SUPERFAMILY SSF50475 4 135 2.24E-28 T 11-10-2018 ABE28_003590 25b77aed5c481fd48aaf41b615d4d4d0 40 Pfam PF14152 YfhE-like protein 3 36 8.8E-15 T 11-10-2018 IPR025437 YfhE-like protein ABE28_006500 a218e98d4072ffb646d9ab0adc989d10 449 PIRSF PIRSF006060 1 449 2.4E-66 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_006500 a218e98d4072ffb646d9ab0adc989d10 449 Gene3D G3DSA:1.20.1740.10 4 449 6.9E-63 T 11-10-2018 ABE28_006500 a218e98d4072ffb646d9ab0adc989d10 449 Pfam PF00324 Amino acid permease 15 446 3.6E-90 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_006500 a218e98d4072ffb646d9ab0adc989d10 449 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_009430 95530955b397fe36a15d10ba094ea361 201 SUPERFAMILY SSF53335 5 164 2.7E-23 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_009430 95530955b397fe36a15d10ba094ea361 201 Gene3D G3DSA:3.40.50.150 15 186 1.9E-17 T 11-10-2018 ABE28_009430 95530955b397fe36a15d10ba094ea361 201 Pfam PF00398 Ribosomal RNA adenine dimethylase 3 140 1.1E-10 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm ABE28_022330 bd9dd8eeadd63e9d555d11e64b851117 351 SUPERFAMILY SSF81345 16 347 1.96E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_022330 bd9dd8eeadd63e9d555d11e64b851117 351 Gene3D G3DSA:1.10.3470.10 19 351 2.2E-99 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_022330 bd9dd8eeadd63e9d555d11e64b851117 351 Pfam PF01032 FecCD transport family 35 347 8.3E-94 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_003865 bc614558b7e5842bf3ce6aad7024117f 284 Pfam PF16261 Domain of unknown function (DUF4915) 68 283 8.5E-11 T 11-10-2018 IPR017481 Conserved hypothetical protein CHP03032 ABE28_003865 bc614558b7e5842bf3ce6aad7024117f 284 SUPERFAMILY SSF63825 40 242 9.42E-9 T 11-10-2018 ABE28_011800 6718d4cb9503147207cbb96bf43c6bed 114 Pfam PF12986 Domain of unknown function (DUF3870) 8 100 2.1E-25 T 11-10-2018 IPR024617 Domain of unknown function DUF3870 ABE28_014675 919f83c3af36e065ad10fab6de05c996 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 137 4.6E-45 T 11-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 ABE28_014675 919f83c3af36e065ad10fab6de05c996 141 Pfam PF02566 OsmC-like protein 44 137 8.2E-16 T 11-10-2018 IPR003718 OsmC/Ohr family ABE28_014675 919f83c3af36e065ad10fab6de05c996 141 Gene3D G3DSA:2.20.25.10 3 43 1.4E-9 T 11-10-2018 ABE28_014675 919f83c3af36e065ad10fab6de05c996 141 SUPERFAMILY SSF82784 2 138 1.01E-30 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ABE28_014675 919f83c3af36e065ad10fab6de05c996 141 Gene3D G3DSA:3.30.300.20 47 139 3.4E-29 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_013760 6407f6d7e05c969ac9c3e2529d5817f2 233 SUPERFAMILY SSF51366 10 226 6.12E-51 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_013760 6407f6d7e05c969ac9c3e2529d5817f2 233 Gene3D G3DSA:3.20.20.70 1 227 1.9E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_013760 6407f6d7e05c969ac9c3e2529d5817f2 233 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 32 228 8.0E-61 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ABE28_013760 6407f6d7e05c969ac9c3e2529d5817f2 233 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 8 228 36.539 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 ABE28_018830 7c1bc27477dac444b25f2a602c338a86 249 SMART SM00382 26 222 3.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_018830 7c1bc27477dac444b25f2a602c338a86 249 Pfam PF00005 ABC transporter 18 165 6.9E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018830 7c1bc27477dac444b25f2a602c338a86 249 SUPERFAMILY SSF52540 1 218 2.37E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018830 7c1bc27477dac444b25f2a602c338a86 249 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_018830 7c1bc27477dac444b25f2a602c338a86 249 Gene3D G3DSA:3.40.50.300 1 235 1.4E-74 T 11-10-2018 ABE28_012100 a44d05784f30757b6c811749bda0ea64 180 SUPERFAMILY SSF52218 4 173 2.02E-28 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_012100 a44d05784f30757b6c811749bda0ea64 180 Gene3D G3DSA:3.40.50.360 3 179 2.4E-38 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_012100 a44d05784f30757b6c811749bda0ea64 180 Pfam PF03358 NADPH-dependent FMN reductase 3 139 3.0E-27 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_012100 a44d05784f30757b6c811749bda0ea64 180 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 4 171 7.9E-56 T 11-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 ABE28_017515 97edf3652850edc0faab07589f5f7e59 271 Gene3D G3DSA:3.40.50.10090 37 173 7.2E-65 T 11-10-2018 ABE28_017515 97edf3652850edc0faab07589f5f7e59 271 Gene3D G3DSA:3.40.50.10090 13 256 7.2E-65 T 11-10-2018 ABE28_017515 97edf3652850edc0faab07589f5f7e59 271 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 256 8.2E-35 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_017515 97edf3652850edc0faab07589f5f7e59 271 SUPERFAMILY SSF69618 6 265 1.16E-46 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 ABE28_023175 6cad8dfbb0ca2bc7fda0459ae469dd85 221 SUPERFAMILY SSF102588 4 195 1.1E-51 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_023175 6cad8dfbb0ca2bc7fda0459ae469dd85 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 7.1E-29 T 11-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 ABE28_023175 6cad8dfbb0ca2bc7fda0459ae469dd85 221 Gene3D G3DSA:3.40.50.10320 1 216 3.9E-51 T 11-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 ABE28_023175 6cad8dfbb0ca2bc7fda0459ae469dd85 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 221 4.0E-106 T 11-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 ABE28_016085 5e8cf6f6fe653b17719c68170ee9d9bb 385 Pfam PF00872 Transposase, Mutator family 1 377 1.6E-132 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ABE28_001770 5e8cf6f6fe653b17719c68170ee9d9bb 385 Pfam PF00872 Transposase, Mutator family 1 377 1.6E-132 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ABE28_021105 bf5edc50751133b03db626602636182a 256 Pfam PF01925 Sulfite exporter TauE/SafE 13 247 8.0E-43 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABE28_020675 e44aea93768f008812fb312c36da2a94 399 Gene3D G3DSA:3.40.50.2000 208 385 1.9E-17 T 11-10-2018 ABE28_020675 e44aea93768f008812fb312c36da2a94 399 SUPERFAMILY SSF53756 4 398 5.23E-40 T 11-10-2018 ABE28_020675 e44aea93768f008812fb312c36da2a94 399 Pfam PF13579 Glycosyl transferase 4-like domain 25 200 1.2E-13 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_020675 e44aea93768f008812fb312c36da2a94 399 Pfam PF00534 Glycosyl transferases group 1 214 377 1.8E-12 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_020675 e44aea93768f008812fb312c36da2a94 399 Gene3D G3DSA:3.40.50.2000 2 207 5.1E-19 T 11-10-2018 ABE28_004080 db18cb2488c4a8e1e59a8c45e22f6296 200 SUPERFAMILY SSF46785 5 171 4.46E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_004080 db18cb2488c4a8e1e59a8c45e22f6296 200 Gene3D G3DSA:1.10.10.10 2 87 6.0E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_004080 db18cb2488c4a8e1e59a8c45e22f6296 200 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 2.1E-16 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 476 6.4E-15 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 Gene3D G3DSA:3.30.1360.60 412 491 7.8E-22 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 486 2.2E-196 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 429 446 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 Pfam PF02378 Phosphotransferase system, EIIC 10 315 3.3E-77 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 Pfam PF00367 phosphotransferase system, EIIB 419 451 5.7E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 ABE28_010840 60e4c824397a0624a0e5790d09c7b5e0 492 SUPERFAMILY SSF55604 416 489 1.31E-17 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 ABE28_002790 29e514513c4196e0f2365fe2452a2975 171 Pfam PF07308 Protein of unknown function (DUF1456) 104 171 1.1E-22 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 ABE28_002790 29e514513c4196e0f2365fe2452a2975 171 Pfam PF07308 Protein of unknown function (DUF1456) 3 81 3.4E-26 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 ABE28_015535 d3ecb40e9d3d3a21b7039023206be6c4 107 ProDom PD072942 YQXA ORF79 1 107 2.0E-17 T 11-10-2018 IPR020534 Uncharacterised protein family YqxA ABE28_015535 d3ecb40e9d3d3a21b7039023206be6c4 107 Pfam PF12438 Protein of unknown function (DUF3679) 7 62 1.0E-25 T 11-10-2018 IPR020534 Uncharacterised protein family YqxA ABE28_011215 291829db2c0d229ec59b69af0d6ed64f 353 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 2.3E-132 T 11-10-2018 IPR025006 Protein of unknown function DUF3900 ABE28_011215 291829db2c0d229ec59b69af0d6ed64f 353 Pfam PF13037 Domain of unknown function (DUF3898) 261 349 3.5E-39 T 11-10-2018 IPR025012 Domain of unknown function DUF3898 ABE28_010175 2066aa15aca2f52ff47f291b41eca721 259 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 1.3E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 Pfam PF00561 alpha/beta hydrolase fold 18 123 4.8E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 Gene3D G3DSA:3.40.50.1820 2 253 4.3E-57 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 86 99 6.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 100 113 6.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 42 57 6.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 199 213 6.2E-13 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_014010 35e606edeeca3b5f8d816d634c1d16e7 254 SUPERFAMILY SSF53474 6 252 3.69E-51 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_020290 d3fea5f5ad9fd23c961aa62fb4518103 224 SUPERFAMILY SSF53335 37 223 3.91E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_020290 d3fea5f5ad9fd23c961aa62fb4518103 224 Gene3D G3DSA:3.40.50.150 3 224 1.6E-75 T 11-10-2018 ABE28_020290 d3fea5f5ad9fd23c961aa62fb4518103 224 Pfam PF01596 O-methyltransferase 31 206 9.5E-45 T 11-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 ABE28_021415 20f702aef30b133841faca9dfb97c6d8 285 Gene3D G3DSA:1.20.1260.130 4 284 4.7E-101 T 11-10-2018 ABE28_021415 20f702aef30b133841faca9dfb97c6d8 285 SUPERFAMILY SSF47240 2 283 2.78E-83 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_021415 20f702aef30b133841faca9dfb97c6d8 285 Pfam PF05067 Manganese containing catalase 2 276 2.5E-65 T 11-10-2018 IPR007760 Manganese catalase ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 Gene3D G3DSA:3.40.50.1390 3 130 9.8E-18 T 11-10-2018 ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 SMART SM00857 3 148 2.3E-28 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 Pfam PF00239 Resolvase, N terminal domain 4 148 8.9E-22 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 Gene3D G3DSA:1.10.10.2600 132 267 1.1E-22 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 Pfam PF07508 Recombinase 170 263 1.1E-14 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 ABE28_013220 db46bba0a2be4b76adb9cbbafbb0a6fe 492 SUPERFAMILY SSF53041 1 148 1.83E-26 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 Gene3D G3DSA:3.40.50.1820 5 266 3.6E-65 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 SUPERFAMILY SSF53474 9 262 5.67E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 4.4E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 89 102 4.4E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00111 Alpha/beta hydrolase fold signature 45 60 4.4E-10 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 Pfam PF00561 alpha/beta hydrolase fold 21 133 3.5E-22 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00412 Epoxide hydrolase signature 45 60 4.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00412 Epoxide hydrolase signature 237 259 4.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_004125 66099fdbb6797f71fbe311232abe948c 270 PRINTS PR00412 Epoxide hydrolase signature 204 220 4.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 ABE28_010220 68317fe9a0f4e820b56d2c0089335b3a 416 Pfam PF12698 ABC-2 family transporter protein 19 387 1.9E-57 T 11-10-2018 ABE28_021550 91c5693c795bc899948c151aa226b9d9 230 Pfam PF06725 3D domain 127 188 2.6E-18 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 ABE28_021550 91c5693c795bc899948c151aa226b9d9 230 SUPERFAMILY SSF50685 127 168 4.53E-7 T 11-10-2018 IPR036908 RlpA-like domain superfamily ABE28_002040 3005e942e4e533a48cd8eedcc2524438 188 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 6 183 4.2E-41 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_020735 5eedc9917579b6bb5b7c93f025b3a98b 266 Gene3D G3DSA:1.10.3720.10 70 266 8.0E-26 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_020735 5eedc9917579b6bb5b7c93f025b3a98b 266 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 263 1.4E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_020735 5eedc9917579b6bb5b7c93f025b3a98b 266 SUPERFAMILY SSF161098 70 256 1.1E-31 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_012150 530cff230996a4d5aaae2cdec34dd5dd 208 Gene3D G3DSA:3.40.50.360 1 208 2.4E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_012150 530cff230996a4d5aaae2cdec34dd5dd 208 SUPERFAMILY SSF52218 1 206 5.16E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_012150 530cff230996a4d5aaae2cdec34dd5dd 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 24.771 T 11-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 ABE28_012150 530cff230996a4d5aaae2cdec34dd5dd 208 Pfam PF02525 Flavodoxin-like fold 3 203 9.3E-36 T 11-10-2018 IPR003680 Flavodoxin-like fold ABE28_001225 86cf8a6d7a0fe8481aed4797297380df 281 Gene3D G3DSA:1.20.1420.20 38 279 2.0E-92 T 11-10-2018 IPR038352 Imelysin-like domain superfamily ABE28_001225 86cf8a6d7a0fe8481aed4797297380df 281 Pfam PF09375 Imelysin 47 274 8.9E-42 T 11-10-2018 IPR018976 Imelysin-like domain ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 291 302 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 Pfam PF00171 Aldehyde dehydrogenase family 27 491 3.1E-189 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 Gene3D G3DSA:3.40.309.10 268 461 3.7E-195 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 SUPERFAMILY SSF53720 17 492 3.67E-181 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_002525 5218df306c686ef9b424d3da3e51188c 506 Gene3D G3DSA:3.40.605.10 26 486 3.7E-195 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_006780 66fa77a74ddbde81035e65ca69c89880 397 Pfam PF01098 Cell cycle protein 13 375 7.3E-101 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_006780 66fa77a74ddbde81035e65ca69c89880 397 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 334 358 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 ABE28_002315 5643ba955a7eddcae6880632e6700d92 94 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 1 93 2.5E-34 T 11-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 ABE28_002315 5643ba955a7eddcae6880632e6700d92 94 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 82 1.7E-11 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ABE28_002675 576de0482ba2b14111f136f602c62b01 263 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 219 2.6E-26 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel ABE28_012285 e510168dde0cf22910a6d1588e557407 182 Pfam PF13302 Acetyltransferase (GNAT) domain 17 156 3.2E-33 T 11-10-2018 IPR000182 GNAT domain ABE28_012285 e510168dde0cf22910a6d1588e557407 182 Gene3D G3DSA:3.40.630.30 12 178 7.6E-48 T 11-10-2018 ABE28_012285 e510168dde0cf22910a6d1588e557407 182 SUPERFAMILY SSF55729 11 181 1.6E-50 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_007405 220fbbbcd60b45e8ebd3be29d85f0f0a 405 Pfam PF07670 Nucleoside recognition 43 141 2.6E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABE28_007405 220fbbbcd60b45e8ebd3be29d85f0f0a 405 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 9 359 1.2E-117 T 11-10-2018 IPR014226 Sporulation integral membrane protein YlbJ ABE28_000085 202092529c33a8e68dbe9ea7cc59761b 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 85 6.1E-20 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA ABE28_000085 202092529c33a8e68dbe9ea7cc59761b 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 1.6E-24 T 11-10-2018 IPR010001 SigmaK-factor processing regulatory BofA ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 239 3.3E-44 T 11-10-2018 ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 5.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 5.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 203 223 5.5E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 SUPERFAMILY SSF51735 4 240 9.27E-64 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_008300 e16ece2d5d0e49730108ad43b18f73d7 241 Gene3D G3DSA:3.40.50.720 1 240 1.9E-62 T 11-10-2018 ABE28_003620 2520f0e315b1e7b14c92cb1895c74d1a 325 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 2 165 1.2E-27 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 SUPERFAMILY SSF46785 4 59 2.42E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 SUPERFAMILY SSF100950 75 230 6.38E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 SMART SM01134 71 232 1.3E-43 T 11-10-2018 ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 SMART SM00420 6 58 7.3E-13 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 Pfam PF00455 DeoR C terminal sensor domain 75 230 2.6E-34 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 Gene3D G3DSA:1.10.10.10 1 59 1.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.7E-8 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.7E-8 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_013520 70e2a7ad869eb53849f550fc46bb1769 249 Pfam PF08220 DeoR-like helix-turn-helix domain 6 56 2.9E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 ABE28_020245 e5d1e965e50d9750839eb01a37625407 201 Gene3D G3DSA:1.10.510.10 7 169 1.3E-7 T 11-10-2018 ABE28_020245 e5d1e965e50d9750839eb01a37625407 201 SUPERFAMILY SSF56112 29 158 3.99E-14 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 Pfam PF02254 TrkA-N domain 5 120 9.0E-30 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 Pfam PF02080 TrkA-C domain 150 216 5.4E-14 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 SUPERFAMILY SSF51735 4 134 5.81E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 Gene3D G3DSA:3.40.50.720 1 136 9.3E-39 T 11-10-2018 ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 Gene3D G3DSA:3.30.70.1450 137 217 6.1E-27 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_007115 d280deffbec61d764e94389edf30c7cf 219 SUPERFAMILY SSF116726 131 215 1.31E-20 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_007930 4ecbf8bb4fa0d432dc92ecb6509fa7e5 131 PIRSF PIRSF002889 1 130 8.6E-30 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ABE28_007930 4ecbf8bb4fa0d432dc92ecb6509fa7e5 131 Pfam PF00460 Flagella basal body rod protein 8 38 5.6E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_007930 4ecbf8bb4fa0d432dc92ecb6509fa7e5 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 128 4.5E-30 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 ABE28_023520 cad755789bb9dc30622311a40ca55081 346 Pfam PF13303 Phosphotransferase system, EIIC 19 343 1.2E-94 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_023880 ec4e967defe1e20001ac3cd8330aa7ac 172 SUPERFAMILY SSF50891 54 169 9.86E-23 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_023880 ec4e967defe1e20001ac3cd8330aa7ac 172 Pfam PF04126 Cyclophilin-like 55 168 3.4E-5 T 11-10-2018 IPR025658 Cyclophilin TM1367-like domain ABE28_023880 ec4e967defe1e20001ac3cd8330aa7ac 172 Gene3D G3DSA:2.40.100.20 54 170 7.9E-17 T 11-10-2018 ABE28_023590 8477d18aef76b1eec60096d8f521cd15 227 Pfam PF09359 VTC domain 7 222 4.7E-20 T 11-10-2018 IPR018966 VTC domain ABE28_002190 028a834d16166a7e7f154a2da316d88b 324 Gene3D G3DSA:1.20.1530.20 1 306 5.9E-110 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily ABE28_002190 028a834d16166a7e7f154a2da316d88b 324 Pfam PF01758 Sodium Bile acid symporter family 42 220 1.3E-45 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 Gene3D G3DSA:1.10.357.10 1 162 5.0E-32 T 11-10-2018 ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 SUPERFAMILY SSF46689 3 66 9.48E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 3.7E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 3.7E-12 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_001310 d6b7420cb26188ff78767c6a550e4e53 292 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 52 1.8E-19 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_012170 96d5893e34902254a8ae31e5e63093f2 295 SUPERFAMILY SSF47240 19 271 4.76E-44 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_012170 96d5893e34902254a8ae31e5e63093f2 295 Pfam PF00268 Ribonucleotide reductase, small chain 23 242 5.3E-21 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 ABE28_012170 96d5893e34902254a8ae31e5e63093f2 295 Gene3D G3DSA:1.10.620.20 1 286 4.2E-99 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 ABE28_012555 3fccb2253224fdc1ce70d127368b5b54 239 Pfam PF03567 Sulfotransferase family 8 211 3.1E-14 T 11-10-2018 IPR005331 Sulfotransferase GO:0008146|GO:0016021 ABE28_012555 3fccb2253224fdc1ce70d127368b5b54 239 SUPERFAMILY SSF52540 8 114 7.36E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_012555 3fccb2253224fdc1ce70d127368b5b54 239 Gene3D G3DSA:3.40.50.300 5 237 6.3E-25 T 11-10-2018 ABE28_013265 ae1996e9e996249f61fdffcdeb46f723 282 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 19 280 1.2E-87 T 11-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 ABE28_013265 ae1996e9e996249f61fdffcdeb46f723 282 SUPERFAMILY SSF55729 128 280 5.58E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_013265 ae1996e9e996249f61fdffcdeb46f723 282 Gene3D G3DSA:3.40.630.30 130 282 4.2E-13 T 11-10-2018 ABE28_013265 ae1996e9e996249f61fdffcdeb46f723 282 Pfam PF00583 Acetyltransferase (GNAT) family 147 236 4.5E-7 T 11-10-2018 IPR000182 GNAT domain ABE28_012855 0ae549511fb50005be43725253e00f34 127 SUPERFAMILY SSF52172 1 120 4.41E-34 T 11-10-2018 IPR011006 CheY-like superfamily ABE28_012855 0ae549511fb50005be43725253e00f34 127 Pfam PF00072 Response regulator receiver domain 4 116 3.3E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012855 0ae549511fb50005be43725253e00f34 127 SMART SM00448 2 115 8.5E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 ABE28_012855 0ae549511fb50005be43725253e00f34 127 Gene3D G3DSA:3.40.50.12740 1 126 1.7E-34 T 11-10-2018 ABE28_014025 3bae7d59c724eaf18a8e1fba870c68de 122 SUPERFAMILY SSF140415 5 118 1.44E-36 T 11-10-2018 IPR023351 YppE-like superfamily ABE28_014025 3bae7d59c724eaf18a8e1fba870c68de 122 Gene3D G3DSA:1.20.120.440 2 121 9.5E-43 T 11-10-2018 IPR023351 YppE-like superfamily ABE28_014025 3bae7d59c724eaf18a8e1fba870c68de 122 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 117 2.1E-34 T 11-10-2018 IPR014913 Protein of unknown function DUF1798 ABE28_005160 b18a728ce33d77060445637e6133ae91 322 Pfam PF03060 Nitronate monooxygenase 64 301 1.6E-45 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_005160 b18a728ce33d77060445637e6133ae91 322 SUPERFAMILY SSF51412 5 310 1.83E-64 T 11-10-2018 ABE28_005160 b18a728ce33d77060445637e6133ae91 322 Gene3D G3DSA:3.20.20.70 2 317 2.4E-96 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_015725 828e3874961d9315efe6a8850297e39f 380 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 32 379 5.4E-102 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ABE28_015725 828e3874961d9315efe6a8850297e39f 380 Pfam PF02618 YceG-like family 73 372 3.9E-79 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ABE28_015725 828e3874961d9315efe6a8850297e39f 380 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 35 380 33.046 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ABE28_015725 828e3874961d9315efe6a8850297e39f 380 Gene3D G3DSA:1.10.8.1150 68 142 1.1E-24 T 11-10-2018 ABE28_004145 5c6cdfb45a19355a277fd0873f323122 480 Pfam PF00171 Aldehyde dehydrogenase family 18 475 3.0E-160 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_004145 5c6cdfb45a19355a277fd0873f323122 480 SUPERFAMILY SSF53720 6 478 1.44E-153 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_004145 5c6cdfb45a19355a277fd0873f323122 480 Gene3D G3DSA:3.40.605.10 33 464 5.2E-158 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_004145 5c6cdfb45a19355a277fd0873f323122 480 Gene3D G3DSA:3.40.309.10 257 446 5.2E-158 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_001155 90d4c4313e25a2c9957356b877c1deef 406 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 105 397 8.7E-88 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 ABE28_001155 90d4c4313e25a2c9957356b877c1deef 406 Pfam PF00425 chorismate binding enzyme 126 390 2.8E-77 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal ABE28_001155 90d4c4313e25a2c9957356b877c1deef 406 SUPERFAMILY SSF56322 21 401 1.7E-91 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_001155 90d4c4313e25a2c9957356b877c1deef 406 Gene3D G3DSA:3.60.120.10 3 406 2.2E-133 T 11-10-2018 IPR005801 ADC synthase GO:0009058 ABE28_004205 b3b053b0ad6dc8a2805530f2b907505f 161 Pfam PF01471 Putative peptidoglycan binding domain 47 104 9.9E-16 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_004205 b3b053b0ad6dc8a2805530f2b907505f 161 Gene3D G3DSA:1.10.101.10 30 117 6.5E-24 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_004205 b3b053b0ad6dc8a2805530f2b907505f 161 SUPERFAMILY SSF47090 39 108 6.8E-18 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_017615 cc818d8167c01b338753d756eee29d48 124 Gene3D G3DSA:1.10.10.2840 3 118 1.2E-14 T 11-10-2018 ABE28_017615 cc818d8167c01b338753d756eee29d48 124 Pfam PF13556 PucR C-terminal helix-turn-helix domain 54 112 9.1E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_009030 006362d01f5322d1987e7cce2959482d 394 Pfam PF04865 Baseplate J-like protein 74 326 4.2E-21 T 11-10-2018 IPR006949 Baseplate protein J-like ABE28_000125 8e1d14deb8293c5b285707f881080747 146 Pfam PF03885 Protein of unknown function (DUF327) 13 145 1.0E-38 T 11-10-2018 IPR005585 Protein of unknown function DUF327 ABE28_000125 8e1d14deb8293c5b285707f881080747 146 Gene3D G3DSA:1.20.120.490 25 146 1.3E-38 T 11-10-2018 IPR024042 TM1646-like domain superfamily ABE28_000125 8e1d14deb8293c5b285707f881080747 146 SUPERFAMILY SSF158397 28 146 1.24E-33 T 11-10-2018 IPR024042 TM1646-like domain superfamily ABE28_001360 9b647e809546fe8542d9e55331fbbc84 157 Pfam PF03703 Bacterial PH domain 70 146 1.2E-17 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_022100 4fbc9c725d9600a6366e2cd563fbf743 275 SUPERFAMILY SSF55166 107 256 1.1E-36 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_022100 4fbc9c725d9600a6366e2cd563fbf743 275 Gene3D G3DSA:3.30.1380.10 58 270 3.1E-79 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_022100 4fbc9c725d9600a6366e2cd563fbf743 275 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 120 247 8.2E-43 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 ABE28_016375 725f9771735437fb84c6dd0449e1894a 172 Pfam PF04093 rod shape-determining protein MreD 3 163 2.7E-26 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ABE28_016375 725f9771735437fb84c6dd0449e1894a 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 159 3.9E-28 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 ABE28_002680 69542efda54003139efab2b47d4815c5 251 Gene3D G3DSA:3.30.1330.60 85 250 6.6E-44 T 11-10-2018 IPR036737 OmpA-like domain superfamily ABE28_002680 69542efda54003139efab2b47d4815c5 251 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 4 58 1.3E-20 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain ABE28_002680 69542efda54003139efab2b47d4815c5 251 Pfam PF00691 OmpA family 137 237 2.9E-13 T 11-10-2018 IPR006665 OmpA-like domain ABE28_002680 69542efda54003139efab2b47d4815c5 251 SUPERFAMILY SSF103088 124 245 6.54E-25 T 11-10-2018 IPR036737 OmpA-like domain superfamily ABE28_015095 bc2f1e41d54e465259a88fc217a05886 61 Pfam PF14038 YqzE-like protein 2 54 1.5E-21 T 11-10-2018 IPR025622 YqzE-like protein ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 Gene3D G3DSA:3.40.50.1170 7 220 1.1E-78 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 PIRSF PIRSF500176 5 332 1.4E-70 T 11-10-2018 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 Gene3D G3DSA:3.40.50.40 221 331 2.7E-34 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 Pfam PF00710 Asparaginase, N-terminal 8 200 6.6E-53 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 PRINTS PR00139 Asparaginase/glutaminase family signature 9 20 4.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 PRINTS PR00139 Asparaginase/glutaminase family signature 268 286 4.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 PRINTS PR00139 Asparaginase/glutaminase family signature 89 107 4.9E-22 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 90 100 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 2 330 1.2E-122 T 11-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 PIRSF PIRSF001220 3 332 5.3E-80 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 SMART SM00870 8 326 1.7E-120 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 ABE28_011835 a707b8eb6dc086b80304a4f79fd272e9 332 SUPERFAMILY SSF53774 6 330 1.44E-93 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 ABE28_001365 69dc04df82a09ae1057ca680d4cd553f 489 Pfam PF03703 Bacterial PH domain 253 329 2.6E-12 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_001365 69dc04df82a09ae1057ca680d4cd553f 489 Pfam PF03703 Bacterial PH domain 64 142 4.6E-20 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_001365 69dc04df82a09ae1057ca680d4cd553f 489 Pfam PF03703 Bacterial PH domain 400 464 1.7E-9 T 11-10-2018 IPR005182 Domain of unknown function DUF304 ABE28_001365 69dc04df82a09ae1057ca680d4cd553f 489 PIRSF PIRSF026631 1 489 3.0E-122 T 11-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 ABE28_014035 5256f24f8f3419b43d38ee8c091f86e4 315 Pfam PF10720 Protein of unknown function (DUF2515) 12 309 1.8E-113 T 11-10-2018 IPR019658 Protein of unknown function DUF2515 ABE28_015660 83791c5d4efa223f257600f98dbe2387 88 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 12 82 7.0E-8 T 11-10-2018 IPR025418 YrhC-like protein ABE28_015660 83791c5d4efa223f257600f98dbe2387 88 Pfam PF14143 YrhC-like protein 12 81 2.5E-22 T 11-10-2018 IPR025418 YrhC-like protein ABE28_017835 3418405703fbafdfc8299da3b9c12c43 414 SMART SM00854 61 307 1.7E-82 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA ABE28_017835 3418405703fbafdfc8299da3b9c12c43 414 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 61 307 1.3E-70 T 11-10-2018 IPR019079 Capsule synthesis protein, CapA ABE28_017835 3418405703fbafdfc8299da3b9c12c43 414 SUPERFAMILY SSF56300 62 320 1.25E-40 T 11-10-2018 ABE28_017835 3418405703fbafdfc8299da3b9c12c43 414 Gene3D G3DSA:3.60.21.10 120 303 2.5E-8 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like ABE28_022255 1c2309e307225d6186e719d9b23f5210 357 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 2 354 4.2E-86 T 11-10-2018 IPR030832 Processed acidic surface protein ABE28_011580 4f10c3cf3b17ad5c311b98db6fe41b39 313 Pfam PF00480 ROK family 4 288 2.7E-47 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 ABE28_011580 4f10c3cf3b17ad5c311b98db6fe41b39 313 Gene3D G3DSA:3.30.420.40 120 275 3.8E-73 T 11-10-2018 ABE28_011580 4f10c3cf3b17ad5c311b98db6fe41b39 313 SUPERFAMILY SSF53067 1 292 3.49E-53 T 11-10-2018 ABE28_011580 4f10c3cf3b17ad5c311b98db6fe41b39 313 Gene3D G3DSA:3.30.420.40 5 285 3.8E-73 T 11-10-2018 ABE28_013845 a7a18d58ee64ff851fb5c9c6ab955e84 147 Pfam PF11181 Heat induced stress protein YflT 6 43 1.4E-6 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_014180 d01a3e4aeccde14246727db27190f339 290 Gene3D G3DSA:3.30.70.120 194 269 3.7E-27 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal ABE28_014180 d01a3e4aeccde14246727db27190f339 290 PIRSF PIRSF006483 4 284 7.3E-95 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_014180 d01a3e4aeccde14246727db27190f339 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 6.4E-22 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_014180 d01a3e4aeccde14246727db27190f339 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 217 2.5E-66 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_016930 64618f11817b689e8547e832fad907af 310 PIRSF PIRSF005651 18 310 5.3E-96 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 ABE28_016930 64618f11817b689e8547e832fad907af 310 SUPERFAMILY SSF117892 73 212 4.32E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily ABE28_016930 64618f11817b689e8547e832fad907af 310 Pfam PF01145 SPFH domain / Band 7 family 44 224 4.4E-27 T 11-10-2018 IPR001107 Band 7 domain ABE28_016930 64618f11817b689e8547e832fad907af 310 Gene3D G3DSA:3.30.479.30 69 209 2.3E-22 T 11-10-2018 ABE28_016930 64618f11817b689e8547e832fad907af 310 SMART SM00244 40 207 4.4E-19 T 11-10-2018 IPR001107 Band 7 domain ABE28_000430 91c5a17b993579b7ff4188719902f589 183 SUPERFAMILY SSF46600 139 174 1.27E-5 T 11-10-2018 IPR036876 UVR domain superfamily ABE28_000430 91c5a17b993579b7ff4188719902f589 183 Pfam PF02151 UvrB/uvrC motif 139 172 1.8E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 ABE28_000430 91c5a17b993579b7ff4188719902f589 183 PIRSF PIRSF015034 1 181 6.7E-68 T 11-10-2018 IPR025542 YacH protein ABE28_006355 7fb8ba0b8b677e6414e58a52abea2bd0 700 Pfam PF12698 ABC-2 family transporter protein 347 676 8.8E-13 T 11-10-2018 ABE28_006355 7fb8ba0b8b677e6414e58a52abea2bd0 700 Pfam PF12698 ABC-2 family transporter protein 19 160 3.0E-9 T 11-10-2018 ABE28_006355 7fb8ba0b8b677e6414e58a52abea2bd0 700 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 482 681 3.3E-49 T 11-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal ABE28_006355 7fb8ba0b8b677e6414e58a52abea2bd0 700 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 172 1.3E-45 T 11-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal ABE28_020525 299c16af476460cbec892434068b7c98 225 SUPERFAMILY SSF116726 129 210 1.7E-6 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 Pfam PF00471 Ribosomal protein L33 3 49 5.8E-25 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 20.014 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 7.7E-22 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 SUPERFAMILY SSF57829 1 49 6.96E-21 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABE28_021145 2f074b7d914573962143d6d6c868234c 49 Gene3D G3DSA:2.20.28.120 1 49 1.1E-25 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 Pfam PF01196 Ribosomal protein L17 16 120 9.2E-39 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.743 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 Gene3D G3DSA:3.90.1030.10 1 120 1.6E-49 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 1.7E-48 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_000720 c5ae2c4a6874bebd0daf18ae99a52a65 120 SUPERFAMILY SSF64263 2 120 4.06E-44 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 Gene3D G3DSA:3.20.20.100 1 305 8.8E-92 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 SUPERFAMILY SSF51430 1 300 3.01E-75 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 PRINTS PR00069 Aldo-keto reductase signature 185 214 7.3E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 PRINTS PR00069 Aldo-keto reductase signature 233 257 7.3E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 PRINTS PR00069 Aldo-keto reductase signature 101 119 7.3E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 PRINTS PR00069 Aldo-keto reductase signature 38 62 7.3E-8 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_018660 fb419b334f86bddb5414deb957dcec28 305 Pfam PF00248 Aldo/keto reductase family 17 296 4.0E-59 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_014390 30f5e0cdc734eaf4c31ffe573b41e079 228 Pfam PF13367 Protease prsW family 28 196 4.7E-36 T 11-10-2018 IPR026898 Protease PrsW GO:0008233 ABE28_014390 30f5e0cdc734eaf4c31ffe573b41e079 228 PIRSF PIRSF016933 1 220 5.5E-83 T 11-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 SMART SM00861 4 179 3.4E-71 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 Gene3D G3DSA:3.40.50.920 193 326 1.8E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 SUPERFAMILY SSF52922 188 324 5.37E-39 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 Gene3D G3DSA:3.40.50.970 1 192 5.1E-93 T 11-10-2018 ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 8.6E-53 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 SUPERFAMILY SSF52518 2 204 2.65E-74 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_010435 d2efc1faf6e27d0aaf1c21645c0066e8 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 2.0E-40 T 11-10-2018 IPR033248 Transketolase, C-terminal domain ABE28_002235 aebd7ec0b15cc236febf2d8165c5c542 272 SUPERFAMILY SSF161098 2 272 1.68E-68 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002235 aebd7ec0b15cc236febf2d8165c5c542 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 265 2.9E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002235 aebd7ec0b15cc236febf2d8165c5c542 272 Gene3D G3DSA:1.10.3720.10 1 264 2.4E-60 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 Gene3D G3DSA:3.30.70.360 175 292 3.4E-132 T 11-10-2018 ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 25 344 4.0E-68 T 11-10-2018 IPR017439 Amidohydrolase GO:0016787 ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 PIRSF PIRSF037226 4 401 5.8E-166 T 11-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 Pfam PF07687 Peptidase dimerisation domain 182 269 2.9E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 Gene3D G3DSA:3.40.630.10 26 370 3.4E-132 T 11-10-2018 ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 SUPERFAMILY SSF53187 11 385 1.51E-58 T 11-10-2018 ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 SUPERFAMILY SSF55031 178 284 1.18E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain ABE28_019155 26f480166a7f5882e1d159b687f0f533 401 Pfam PF01546 Peptidase family M20/M25/M40 89 362 1.1E-8 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 ABE28_014175 83fdfb2959686ee922b816ddeb533fa3 119 PIRSF PIRSF029904 2 112 2.4E-52 T 11-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD ABE28_014175 83fdfb2959686ee922b816ddeb533fa3 119 Gene3D G3DSA:1.10.287.1080 3 118 6.5E-34 T 11-10-2018 ABE28_014175 83fdfb2959686ee922b816ddeb533fa3 119 SUPERFAMILY SSF101386 5 105 4.8E-26 T 11-10-2018 ABE28_014175 83fdfb2959686ee922b816ddeb533fa3 119 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 6.8E-19 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 Gene3D G3DSA:3.10.580.10 1 161 1.2E-35 T 11-10-2018 ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 SMART SM00116 10 58 6.6E-9 T 11-10-2018 IPR000644 CBS domain ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 SMART SM00116 81 128 1.2E-7 T 11-10-2018 IPR000644 CBS domain ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 SUPERFAMILY SSF54631 1 130 1.21E-28 T 11-10-2018 ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 SUPERFAMILY SSF55021 138 207 6.34E-9 T 11-10-2018 ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 Pfam PF00571 CBS domain 75 126 1.3E-5 T 11-10-2018 IPR000644 CBS domain ABE28_017310 4dc135933720cff2459d0df2a251e9c5 216 Pfam PF00571 CBS domain 3 56 1.4E-12 T 11-10-2018 IPR000644 CBS domain ABE28_016050 9665e138eb9f4e8d3fa1ae16e4dc1ec8 225 Pfam PF13614 AAA domain 53 184 2.7E-15 T 11-10-2018 IPR025669 AAA domain ABE28_016050 9665e138eb9f4e8d3fa1ae16e4dc1ec8 225 Gene3D G3DSA:3.40.50.300 1 225 2.6E-78 T 11-10-2018 ABE28_016050 9665e138eb9f4e8d3fa1ae16e4dc1ec8 225 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 23 223 8.0E-70 T 11-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 ABE28_016050 9665e138eb9f4e8d3fa1ae16e4dc1ec8 225 SUPERFAMILY SSF52540 42 221 7.77E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_023580 d2aead19cca3ea7758fba3fe1f8d83f0 502 SUPERFAMILY SSF53383 25 491 3.84E-124 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_023580 d2aead19cca3ea7758fba3fe1f8d83f0 502 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 66 429 9.5E-62 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 ABE28_023580 d2aead19cca3ea7758fba3fe1f8d83f0 502 Gene3D G3DSA:3.90.1150.170 58 490 2.3E-141 T 11-10-2018 ABE28_023580 d2aead19cca3ea7758fba3fe1f8d83f0 502 Gene3D G3DSA:3.40.640.10 120 372 2.3E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_005130 2b8603f6ec520b1540a0b31aca856fc0 505 Gene3D G3DSA:3.40.605.10 23 489 6.8E-189 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 ABE28_005130 2b8603f6ec520b1540a0b31aca856fc0 505 Pfam PF00171 Aldehyde dehydrogenase family 31 491 1.5E-182 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 ABE28_005130 2b8603f6ec520b1540a0b31aca856fc0 505 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 263 270 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 ABE28_005130 2b8603f6ec520b1540a0b31aca856fc0 505 SUPERFAMILY SSF53720 17 492 1.24E-174 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 ABE28_005130 2b8603f6ec520b1540a0b31aca856fc0 505 Gene3D G3DSA:3.40.309.10 268 461 6.8E-189 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 ABE28_007060 03c56dbdff28d4affda7d521f4a7534b 161 Pfam PF13158 Protein of unknown function (DUF3993) 6 120 1.7E-21 T 11-10-2018 IPR025056 Protein of unknown function DUF3993 ABE28_021285 67de245dc02db0d9ac4136fdc1954ecb 249 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 11 236 6.3E-42 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 ABE28_021285 67de245dc02db0d9ac4136fdc1954ecb 249 Gene3D G3DSA:3.20.20.190 3 245 1.6E-79 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_021285 67de245dc02db0d9ac4136fdc1954ecb 249 SUPERFAMILY SSF51695 6 241 1.99E-71 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 ABE28_004000 bdb857b9c34a4c515c4d5825a9b711c6 477 Pfam PF00474 Sodium:solute symporter family 33 414 2.4E-48 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_004000 bdb857b9c34a4c515c4d5825a9b711c6 477 Gene3D G3DSA:1.20.1730.10 21 473 1.2E-89 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_004000 bdb857b9c34a4c515c4d5825a9b711c6 477 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 147 172 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site ABE28_009290 aded5f1e27a499bd3d78365148fece3c 279 SUPERFAMILY SSF56281 27 277 2.1E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_009290 aded5f1e27a499bd3d78365148fece3c 279 SMART SM00849 38 234 2.8E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_009290 aded5f1e27a499bd3d78365148fece3c 279 Pfam PF00753 Metallo-beta-lactamase superfamily 36 233 2.9E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_009290 aded5f1e27a499bd3d78365148fece3c 279 Gene3D G3DSA:3.60.15.10 26 278 2.4E-72 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_017950 8e2b506dcb275ba13fe4687ed9481f33 542 PIRSF PIRSF005690 24 519 2.8E-187 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_017950 8e2b506dcb275ba13fe4687ed9481f33 542 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 39 504 6.4E-190 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_001405 8b02aa7797e07c47a9094cd4a2045ee2 118 Gene3D G3DSA:3.30.750.24 1 116 1.1E-31 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_001405 8b02aa7797e07c47a9094cd4a2045ee2 118 Pfam PF01740 STAS domain 10 95 6.2E-12 T 11-10-2018 IPR002645 STAS domain ABE28_001405 8b02aa7797e07c47a9094cd4a2045ee2 118 SUPERFAMILY SSF52091 1 113 4.12E-19 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_018130 e5f6374ccabf818e9aa8e53bd97f9d16 161 Pfam PF10901 Protein of unknown function (DUF2690) 38 142 8.7E-32 T 11-10-2018 IPR021224 Protein of unknown function DUF2690 ABE28_022155 62dbe2fa8c4e897bd9a6efb276bd96e7 80 Pfam PF05768 Glutaredoxin-like domain (DUF836) 7 61 6.2E-15 T 11-10-2018 IPR008554 Glutaredoxin-like ABE28_022155 62dbe2fa8c4e897bd9a6efb276bd96e7 80 Gene3D G3DSA:3.40.30.10 1 78 7.3E-19 T 11-10-2018 ABE28_022155 62dbe2fa8c4e897bd9a6efb276bd96e7 80 SUPERFAMILY SSF52833 4 80 6.98E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_012370 255c73fdd675cc326de45f3a07ac587d 141 Pfam PF15428 Immunity protein 26 9 91 1.9E-6 T 11-10-2018 IPR029278 Immunity protein 26 ABE28_009660 74ff65c7e182a9f91d9489a4be9d3fb0 186 Pfam PF13302 Acetyltransferase (GNAT) domain 12 152 1.1E-29 T 11-10-2018 IPR000182 GNAT domain ABE28_009660 74ff65c7e182a9f91d9489a4be9d3fb0 186 Gene3D G3DSA:3.40.630.30 1 184 2.6E-43 T 11-10-2018 ABE28_009660 74ff65c7e182a9f91d9489a4be9d3fb0 186 SUPERFAMILY SSF55729 5 177 2.98E-46 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_002990 29661155fe8ec9a92dd1f92beb5a6a6a 444 PIRSF PIRSF000337 2 442 3.0E-149 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABE28_002990 29661155fe8ec9a92dd1f92beb5a6a6a 444 SUPERFAMILY SSF51679 5 433 1.57E-133 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_002990 29661155fe8ec9a92dd1f92beb5a6a6a 444 Gene3D G3DSA:3.20.20.30 1 444 1.4E-161 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_002990 29661155fe8ec9a92dd1f92beb5a6a6a 444 Pfam PF00296 Luciferase-like monooxygenase 20 386 1.5E-64 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_002990 29661155fe8ec9a92dd1f92beb5a6a6a 444 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 9 427 3.1E-169 T 11-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 ABE28_003525 67519ab65fc98ed310af8aa9a1988cd7 339 Pfam PF01594 AI-2E family transporter 16 330 5.4E-38 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_007245 8cc13933eb0b149fae873ebfe768e6ee 60 Pfam PF17259 Family of unknown function (DUF5325) 2 60 9.8E-25 T 11-10-2018 IPR035211 Protein of unknown function DUF5325 ABE28_007245 8cc13933eb0b149fae873ebfe768e6ee 60 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 2 55 3.0E-8 T 11-10-2018 IPR035211 Protein of unknown function DUF5325 ABE28_011435 03651ec6c80888be30f1fd07841d7773 137 SUPERFAMILY SSF54593 4 135 4.61E-35 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011435 03651ec6c80888be30f1fd07841d7773 137 Gene3D G3DSA:3.10.180.10 7 137 9.9E-48 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_011435 03651ec6c80888be30f1fd07841d7773 137 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 132 8.0E-12 T 11-10-2018 IPR028973 PhnB-like ABE28_004335 8ba64be3bea178f2da436ba07e3da9be 139 ProDom PD015812 YOPD YWLA YOAG 20 135 9.0E-5 T 11-10-2018 IPR031374 Uncharacterised protein family UPF0715 ABE28_004335 8ba64be3bea178f2da436ba07e3da9be 139 Pfam PF17094 Uncharacterised protein family (UPF0715) 20 134 3.2E-21 T 11-10-2018 IPR031374 Uncharacterised protein family UPF0715 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 PIRSF PIRSF037785 8 188 2.3E-75 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 Pfam PF03838 Recombination protein U 16 181 2.0E-66 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 TIGRFAM TIGR00648 recU: recombination protein U 15 183 3.7E-79 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 Gene3D G3DSA:3.40.1350.10 19 187 1.1E-67 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 188 90.144 T 11-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 ABE28_014040 b2cdf0d386ddb36471c76cb96e6867d9 188 SUPERFAMILY SSF52980 19 184 4.56E-66 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 ABE28_007485 6a9d4f239807854bd1e3ec43cf6b5730 120 Hamap MF_00910 Cell division protein FtsL [ftsL]. 38 120 12.784 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ABE28_007485 6a9d4f239807854bd1e3ec43cf6b5730 120 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 40 120 6.9E-18 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 ABE28_007485 6a9d4f239807854bd1e3ec43cf6b5730 120 Pfam PF04977 Septum formation initiator 45 110 1.4E-7 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC ABE28_001380 ce3317e8505c534b768e0f48628d32d2 335 Gene3D G3DSA:2.50.20.10 27 209 1.5E-14 T 11-10-2018 ABE28_001380 ce3317e8505c534b768e0f48628d32d2 335 SUPERFAMILY SSF89392 27 203 3.3E-20 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX ABE28_007275 d8592eab4dd00eac481912837f1d721e 189 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 12 143 8.1E-15 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_007275 d8592eab4dd00eac481912837f1d721e 189 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 2 145 6.1E-36 T 11-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 ABE28_013035 d45a554a1bbf0efaf81a29b8d17cb4c7 106 Pfam PF09685 Domain of unknown function (DUF4870) 7 106 1.1E-31 T 11-10-2018 IPR019109 Protein of unknown function DUF4870 ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 Gene3D G3DSA:1.10.10.10 4 146 4.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 1.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 1.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 1.5E-6 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 SMART SM00347 31 130 2.5E-27 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 SUPERFAMILY SSF46785 10 144 4.45E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_020330 c00deb26dd6c9491888ff2176046f40b 146 Pfam PF01047 MarR family 40 94 7.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_003380 0bb688495f9a4733254a9affb54225d8 234 SUPERFAMILY SSF161098 28 214 7.46E-44 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003380 0bb688495f9a4733254a9affb54225d8 234 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 229 3.7E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_003380 0bb688495f9a4733254a9affb54225d8 234 Gene3D G3DSA:1.10.3720.10 21 231 4.7E-51 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003380 0bb688495f9a4733254a9affb54225d8 234 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 123 6.5E-29 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_002210 e1dcfb1f04a4da6420915b4c8bf5e3b0 236 Gene3D G3DSA:3.40.50.300 4 233 1.0E-64 T 11-10-2018 ABE28_002210 e1dcfb1f04a4da6420915b4c8bf5e3b0 236 Pfam PF00005 ABC transporter 24 173 4.8E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_002210 e1dcfb1f04a4da6420915b4c8bf5e3b0 236 SUPERFAMILY SSF52540 7 230 4.44E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_002210 e1dcfb1f04a4da6420915b4c8bf5e3b0 236 SMART SM00382 33 224 5.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_002210 e1dcfb1f04a4da6420915b4c8bf5e3b0 236 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 293 316 - T 11-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 SUPERFAMILY SSF118215 7 400 2.09E-115 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 72 97 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 42 62 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 1 21 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 PRINTS PR00173 Glutamate-aspartate symporter signature 143 165 1.6E-36 T 11-10-2018 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 Pfam PF00375 Sodium:dicarboxylate symporter family 7 398 3.5E-107 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 ABE28_002450 ae01c40a22fc47ab277e7722491fd8ce 422 Gene3D G3DSA:1.10.3860.10 2 414 1.4E-120 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 ABE28_004970 7d900512ebaf729773fd8fc19fc7a191 148 Pfam PF00795 Carbon-nitrogen hydrolase 31 98 1.5E-8 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 ABE28_004970 7d900512ebaf729773fd8fc19fc7a191 148 SUPERFAMILY SSF56317 29 103 1.96E-13 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_004970 7d900512ebaf729773fd8fc19fc7a191 148 Gene3D G3DSA:3.60.110.10 20 107 1.4E-14 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily ABE28_017350 2d51c001cbe2fc6d5b27ace9fdc49ed1 190 Pfam PF12732 YtxH-like protein 29 109 6.1E-19 T 11-10-2018 IPR024623 Uncharacterised protein family YtxH ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 297 3.0E-121 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 SUPERFAMILY SSF56349 106 295 3.83E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 1.3E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Pfam PF00589 Phage integrase family 110 282 1.1E-53 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 SUPERFAMILY SSF47823 4 99 3.73E-20 T 11-10-2018 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 297 57.419 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Gene3D G3DSA:1.10.443.10 110 291 2.0E-66 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Gene3D G3DSA:1.10.150.130 2 98 1.8E-21 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal ABE28_014635 23c392e3587fd0f91928f43f45a43da6 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 297 60.798 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 ABE28_012155 ab775f866ca56d29846db220722129c2 244 Pfam PF08892 YqcI/YcgG family 31 239 2.3E-67 T 11-10-2018 IPR014988 Uncharacterised protein family, YqcI/YcgG ABE28_020190 5dd0cff161dd22d600ee17f024aa7d15 109 Gene3D G3DSA:1.10.10.10 4 109 6.0E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_020190 5dd0cff161dd22d600ee17f024aa7d15 109 Pfam PF03551 Transcriptional regulator PadR-like family 19 92 1.5E-19 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal ABE28_020190 5dd0cff161dd22d600ee17f024aa7d15 109 SUPERFAMILY SSF46785 9 108 2.06E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_000195 f06107cc0698598a883275c7529c9aa8 83 PIRSF PIRSF037257 1 83 5.3E-35 T 11-10-2018 IPR009366 Protein Veg GO:0006355 ABE28_000195 f06107cc0698598a883275c7529c9aa8 83 Gene3D G3DSA:2.30.30.100 2 78 1.3E-24 T 11-10-2018 ABE28_000195 f06107cc0698598a883275c7529c9aa8 83 Pfam PF06257 Biofilm formation stimulator VEG 4 74 1.9E-29 T 11-10-2018 IPR009366 Protein Veg GO:0006355 ABE28_021460 98ceec8431200e34309c70e2c348e76a 185 Pfam PF17328 Family of unknown function (DUF5366) 29 184 3.9E-55 T 11-10-2018 IPR035289 Protein of unknown function DUF5366 ABE28_021460 98ceec8431200e34309c70e2c348e76a 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 6.0E-29 T 11-10-2018 IPR035289 Protein of unknown function DUF5366 ABE28_006615 2aee99047b6bd9537588481d487a3e19 174 PIRSF PIRSF024534 2 166 5.7E-51 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW ABE28_006615 2aee99047b6bd9537588481d487a3e19 174 Gene3D G3DSA:1.10.1760.20 4 169 6.8E-15 T 11-10-2018 ABE28_006615 2aee99047b6bd9537588481d487a3e19 174 TIGRFAM TIGR02359 thiW: energy coupling factor transporter S component ThiW 5 158 1.6E-50 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW ABE28_006615 2aee99047b6bd9537588481d487a3e19 174 Pfam PF09512 Thiamine-precursor transporter protein (ThiW) 8 156 1.4E-50 T 11-10-2018 IPR012652 Energy coupling factor transporter S component ThiW ABE28_017190 f1a722fd676ad10ef2b3e18c729f3bc5 94 Pfam PF01910 Thiamine-binding protein 7 91 3.0E-22 T 11-10-2018 IPR002767 Thiamine-binding protein ABE28_017190 f1a722fd676ad10ef2b3e18c729f3bc5 94 Gene3D G3DSA:3.30.70.930 2 94 4.1E-29 T 11-10-2018 IPR029756 MTH1187/YkoF-like ABE28_017190 f1a722fd676ad10ef2b3e18c729f3bc5 94 SUPERFAMILY SSF89957 3 93 3.79E-24 T 11-10-2018 IPR029756 MTH1187/YkoF-like ABE28_015300 6638c07fe4a4b8bf9cef0d0a0343841b 141 Pfam PF01475 Ferric uptake regulator family 13 129 1.1E-28 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 ABE28_015300 6638c07fe4a4b8bf9cef0d0a0343841b 141 Gene3D G3DSA:1.10.10.10 2 83 3.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015300 6638c07fe4a4b8bf9cef0d0a0343841b 141 SUPERFAMILY SSF46785 6 133 2.29E-32 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015300 6638c07fe4a4b8bf9cef0d0a0343841b 141 Gene3D G3DSA:3.30.1490.190 87 139 5.5E-15 T 11-10-2018 ABE28_015145 af6272a55916ce7311fd7ba815c801c5 80 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 1.2E-35 T 11-10-2018 IPR020254 Protein of unknown function DUF2626 ABE28_015145 af6272a55916ce7311fd7ba815c801c5 80 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 80 2.0E-28 T 11-10-2018 IPR020254 Protein of unknown function DUF2626 ABE28_021065 d748be3028f3acc82bab0c59fecafcb2 495 PIRSF PIRSF006060 7 493 8.6E-93 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 ABE28_021065 d748be3028f3acc82bab0c59fecafcb2 495 Gene3D G3DSA:1.20.1740.10 22 486 1.3E-63 T 11-10-2018 ABE28_021065 d748be3028f3acc82bab0c59fecafcb2 495 ProSitePatterns PS00218 Amino acid permeases signature. 55 86 - T 11-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 ABE28_021065 d748be3028f3acc82bab0c59fecafcb2 495 Pfam PF00324 Amino acid permease 30 483 5.0E-143 T 11-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 2.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 2.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 2.3E-25 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 PIRSF PIRSF004669 1 89 3.7E-34 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 2.0E-33 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.7E-30 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 ABE28_008030 9a95ec34142b35ffc0583518d86a622b 89 TIGRFAM TIGR01403 fliQ_rel_III: type III secretion protein, HrpO family 8 84 1.3E-22 T 11-10-2018 IPR006306 Type III secretion protein HrpO GO:0009306|GO:0016021 ABE28_007740 6f4887ca21a39c30ce545589db0c9de5 26 Pfam PF08183 Stage V sporulation protein family 1 25 8.8E-14 T 11-10-2018 IPR012609 Sporulation stage V, protein M ABE28_009930 03aa58c9e43b6c462a387f5146a17557 531 Gene3D G3DSA:3.40.50.1820 53 295 7.1E-31 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_009930 03aa58c9e43b6c462a387f5146a17557 531 SUPERFAMILY SSF53474 56 263 4.74E-23 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_004305 cc7122739f7d20cbbb59e5302f632437 149 Pfam PF13577 SnoaL-like domain 12 139 1.3E-20 T 11-10-2018 IPR037401 SnoaL-like domain ABE28_004305 cc7122739f7d20cbbb59e5302f632437 149 Gene3D G3DSA:3.10.450.50 2 147 1.2E-27 T 11-10-2018 ABE28_004305 cc7122739f7d20cbbb59e5302f632437 149 SUPERFAMILY SSF54427 7 143 1.22E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_008850 f57af193b9248f7ea9f4542a6d43619b 228 SUPERFAMILY SSF52540 95 204 6.98E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_008850 f57af193b9248f7ea9f4542a6d43619b 228 Pfam PF01695 IstB-like ATP binding protein 96 207 1.5E-9 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 ABE28_001325 10dfb5aa8b2f78bad2a36e4423329f94 420 Gene3D G3DSA:2.40.420.20 49 373 5.9E-20 T 11-10-2018 ABE28_001325 10dfb5aa8b2f78bad2a36e4423329f94 420 Gene3D G3DSA:2.40.30.170 52 316 5.9E-20 T 11-10-2018 ABE28_001325 10dfb5aa8b2f78bad2a36e4423329f94 420 Gene3D G3DSA:1.10.287.470 98 205 5.9E-20 T 11-10-2018 ABE28_001325 10dfb5aa8b2f78bad2a36e4423329f94 420 Gene3D G3DSA:2.40.50.100 63 233 5.9E-20 T 11-10-2018 ABE28_021325 7b873c1628a573ddc8ca2b5dabc6f74e 77 Pfam PF04070 Domain of unknown function (DUF378) 4 61 7.5E-26 T 11-10-2018 IPR007211 Protein of unknown function DUF378 ABE28_003105 916e9ac14c79fa07d04b53cc7088aecc 73 SUPERFAMILY SSF160713 4 72 3.66E-12 T 11-10-2018 IPR023118 YqaI domain superfamily ABE28_003105 916e9ac14c79fa07d04b53cc7088aecc 73 Pfam PF09466 Hypothetical protein Yqai 30 72 2.8E-7 T 11-10-2018 IPR018474 Uncharacterised protein family YqaI ABE28_003105 916e9ac14c79fa07d04b53cc7088aecc 73 Gene3D G3DSA:3.30.40.30 4 73 9.8E-13 T 11-10-2018 IPR023118 YqaI domain superfamily ABE28_010680 ef7fc27bb7faa72efc3a114e42eee1d9 255 SUPERFAMILY SSF110399 1 239 1.96E-84 T 11-10-2018 ABE28_010680 ef7fc27bb7faa72efc3a114e42eee1d9 255 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 248 1.6E-110 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABE28_010680 ef7fc27bb7faa72efc3a114e42eee1d9 255 Hamap MF_00443 Thiazole synthase [thiG]. 1 254 42.943 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 ABE28_010680 ef7fc27bb7faa72efc3a114e42eee1d9 255 Gene3D G3DSA:3.20.20.70 1 255 1.3E-118 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_017885 bcfc75924218ba096016d4073dcb6c79 492 PIRSF PIRSF005690 2 492 4.6E-141 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_017885 bcfc75924218ba096016d4073dcb6c79 492 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 480 3.0E-144 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_018800 0b297804087b1393468e66203081ae9e 572 Pfam PF00664 ABC transporter transmembrane region 17 286 1.8E-60 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 ABE28_018800 0b297804087b1393468e66203081ae9e 572 Gene3D G3DSA:3.40.50.300 329 571 3.5E-93 T 11-10-2018 ABE28_018800 0b297804087b1393468e66203081ae9e 572 SUPERFAMILY SSF52540 323 569 9.24E-92 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_018800 0b297804087b1393468e66203081ae9e 572 Gene3D G3DSA:1.20.1560.10 1 315 1.7E-86 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_018800 0b297804087b1393468e66203081ae9e 572 SUPERFAMILY SSF90123 3 321 2.88E-84 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 ABE28_018800 0b297804087b1393468e66203081ae9e 572 Pfam PF00005 ABC transporter 349 498 1.4E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_018800 0b297804087b1393468e66203081ae9e 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_018800 0b297804087b1393468e66203081ae9e 572 SMART SM00382 358 544 2.2E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005110 3848375f065894883e245dcffa300bbf 165 SUPERFAMILY SSF117916 6 101 1.31E-23 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_005110 3848375f065894883e245dcffa300bbf 165 Gene3D G3DSA:3.30.300.130 6 103 2.3E-25 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily ABE28_005110 3848375f065894883e245dcffa300bbf 165 Pfam PF01883 Iron-sulfur cluster assembly protein 9 81 1.9E-17 T 11-10-2018 IPR002744 MIP18 family-like ABE28_005110 3848375f065894883e245dcffa300bbf 165 TIGRFAM TIGR02159 PA_CoA_Oxy4: phenylacetate-CoA oxygenase, PaaJ subunit 18 160 1.3E-51 T 11-10-2018 IPR011883 Phenylacetate-CoA oxygenase, PaaJ subunit ABE28_009625 c03ebee7a23500913752d04888901b22 151 Pfam PF04657 Putative inner membrane exporter, YdcZ 4 137 4.8E-31 T 11-10-2018 IPR006750 Putative inner membrane exporter, YdcZ ABE28_009220 8c271306a59a6dd0200ca74ce66250e4 138 Pfam PF01844 HNH endonuclease 67 113 7.8E-11 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ABE28_009220 8c271306a59a6dd0200ca74ce66250e4 138 SMART SM00507 54 109 7.1E-7 T 11-10-2018 IPR003615 HNH nuclease ABE28_010245 cc7231b3f8ea341ad5b847baab5632f9 153 Pfam PF00583 Acetyltransferase (GNAT) family 33 135 6.6E-18 T 11-10-2018 IPR000182 GNAT domain ABE28_010245 cc7231b3f8ea341ad5b847baab5632f9 153 SUPERFAMILY SSF55729 1 143 5.06E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_010245 cc7231b3f8ea341ad5b847baab5632f9 153 Gene3D G3DSA:3.40.630.30 49 148 1.5E-26 T 11-10-2018 ABE28_011530 8c70852c3982b065fe40296c95b69553 299 SUPERFAMILY SSF56529 71 291 4.97E-31 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_011530 8c70852c3982b065fe40296c95b69553 299 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 160 290 3.3E-18 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 ABE28_011530 8c70852c3982b065fe40296c95b69553 299 Gene3D G3DSA:3.90.850.10 74 295 1.3E-65 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 ABE28_019705 cae3cd2e2094a5bfb87f19fff3cfd828 342 Pfam PF00144 Beta-lactamase 22 324 1.3E-47 T 11-10-2018 IPR001466 Beta-lactamase-related ABE28_019705 cae3cd2e2094a5bfb87f19fff3cfd828 342 SUPERFAMILY SSF56601 3 328 1.74E-71 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019705 cae3cd2e2094a5bfb87f19fff3cfd828 342 Gene3D G3DSA:3.40.710.10 4 336 1.6E-112 T 11-10-2018 ABE28_011175 46632161a227d5f78402e88d0b892d00 353 Pfam PF01032 FecCD transport family 69 349 1.6E-43 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_011175 46632161a227d5f78402e88d0b892d00 353 Gene3D G3DSA:1.10.3470.10 34 352 3.2E-49 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_011175 46632161a227d5f78402e88d0b892d00 353 SUPERFAMILY SSF81345 29 349 2.75E-54 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_005625 59e92e2a4ff59312264e397e48fe61b2 284 Gene3D G3DSA:3.75.10.10 2 281 1.2E-76 T 11-10-2018 ABE28_005625 59e92e2a4ff59312264e397e48fe61b2 284 Pfam PF02274 Amidinotransferase 21 279 7.6E-49 T 11-10-2018 ABE28_005625 59e92e2a4ff59312264e397e48fe61b2 284 SUPERFAMILY SSF55909 7 280 3.57E-76 T 11-10-2018 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 Gene3D G3DSA:1.10.10.10 310 379 1.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 Pfam PF00196 Bacterial regulatory proteins, luxR family 317 370 1.9E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 Gene3D G3DSA:3.30.450.40 176 307 1.4E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 SUPERFAMILY SSF55781 156 304 2.45E-8 T 11-10-2018 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 SMART SM00421 315 372 1.6E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 Pfam PF01590 GAF domain 177 301 1.7E-5 T 11-10-2018 IPR003018 GAF domain GO:0005515 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 332 348 2.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 348 360 2.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 318 332 2.6E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 ABE28_009595 9cd8fa15577a2e1fa720fa04edb9dc0d 379 SUPERFAMILY SSF46894 312 378 4.42E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 ABE28_010360 cda0646500c90d7c862e7b6340a2821f 195 Pfam PF10067 Predicted membrane protein (DUF2306) 46 190 3.6E-35 T 11-10-2018 IPR018750 Protein of unknown function DUF2306, membrane ABE28_018020 26d3974439615476c4b76481675ca13d 270 Pfam PF03059 Nicotianamine synthase protein 7 266 1.2E-30 T 11-10-2018 IPR004298 Nicotianamine synthase GO:0030410|GO:0030418 MetaCyc: PWY-5912|MetaCyc: PWY-5957 ABE28_018020 26d3974439615476c4b76481675ca13d 270 SUPERFAMILY SSF53335 128 226 1.9E-5 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_018020 26d3974439615476c4b76481675ca13d 270 Gene3D G3DSA:3.40.50.150 6 268 9.6E-54 T 11-10-2018 ABE28_013190 7df33d70f1bec1a20dc3683435a44528 56 ProDom PD052277 YOZD 1 55 5.0E-18 T 11-10-2018 ABE28_013190 7df33d70f1bec1a20dc3683435a44528 56 Pfam PF14162 YozD-like protein 1 55 1.3E-31 T 11-10-2018 IPR025545 YozD-like protein ABE28_010715 1bf2df7b5072a64ab4082afece625344 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 3.2E-25 T 11-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 ABE28_010715 1bf2df7b5072a64ab4082afece625344 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 17.894 T 11-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 Pfam PF00266 Aminotransferase class-V 2 364 1.3E-66 T 11-10-2018 IPR000192 Aminotransferase class V domain ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 PIRSF PIRSF005572 1 375 4.3E-110 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 SUPERFAMILY SSF53383 1 371 1.97E-88 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 Gene3D G3DSA:3.90.1150.10 2 368 5.2E-113 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 Gene3D G3DSA:1.10.260.50 13 277 5.2E-113 T 11-10-2018 ABE28_016285 0a277e50881cb9c0c845113b6b1a14e7 375 Gene3D G3DSA:3.40.640.10 59 233 5.2E-113 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_011400 ddc620870ad82e6fb07b8492b0fafbdd 237 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 126 140 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 ABE28_011400 ddc620870ad82e6fb07b8492b0fafbdd 237 Pfam PF13649 Methyltransferase domain 40 132 4.9E-24 T 11-10-2018 ABE28_011400 ddc620870ad82e6fb07b8492b0fafbdd 237 SUPERFAMILY SSF53335 13 184 1.13E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_011400 ddc620870ad82e6fb07b8492b0fafbdd 237 Gene3D G3DSA:3.40.50.150 8 237 1.1E-40 T 11-10-2018 ABE28_005875 ce0c687ab35ad54a446c5406eed9bc62 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.7E-21 T 11-10-2018 IPR019618 Spore germination protein GerPA/GerPF ABE28_010135 a723be9d21e38c147f785612f8084558 337 Gene3D G3DSA:2.70.98.80 8 337 1.1E-15 T 11-10-2018 ABE28_010135 a723be9d21e38c147f785612f8084558 337 Pfam PF14486 Domain of unknown function (DUF4432) 33 332 2.0E-13 T 11-10-2018 IPR027839 Protein of unknown function DUF4432 ABE28_010135 a723be9d21e38c147f785612f8084558 337 SUPERFAMILY SSF74650 37 331 9.73E-5 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 ABE28_014360 835ff2ff78d3d6b73e12744b3cfa6d89 193 SUPERFAMILY SSF69593 2 191 7.85E-52 T 11-10-2018 ABE28_014360 835ff2ff78d3d6b73e12744b3cfa6d89 193 SMART SM00563 35 147 7.1E-35 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABE28_014360 835ff2ff78d3d6b73e12744b3cfa6d89 193 Pfam PF01553 Acyltransferase 22 144 1.6E-22 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 ABE28_006260 10641ec85025173e408924529381561e 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 5 113 3.3E-38 T 11-10-2018 IPR005562 SpoVA ABE28_006260 10641ec85025173e408924529381561e 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 5 118 7.1E-50 T 11-10-2018 IPR014204 Sporulation stage V, protein AE ABE28_019695 6f20a13dfb6bf6eb6d4ac7d18e4edb39 89 Pfam PF13828 Domain of unknown function (DUF4190) 8 67 2.1E-12 T 11-10-2018 IPR025241 Domain of unknown function DUF4190 ABE28_003340 90aee821f561ea409dfff95445dccfe9 354 Pfam PF03417 Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase 104 311 5.4E-62 T 11-10-2018 IPR005079 Peptidase C45 ABE28_003340 90aee821f561ea409dfff95445dccfe9 354 Gene3D G3DSA:3.60.60.10 97 306 1.8E-27 T 11-10-2018 ABE28_003340 90aee821f561ea409dfff95445dccfe9 354 SUPERFAMILY SSF56235 109 227 3.55E-10 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal ABE28_007605 fbad91337d5f766a8267e6094419eb8e 181 Pfam PF00156 Phosphoribosyl transferase domain 7 151 7.5E-22 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 ABE28_007605 fbad91337d5f766a8267e6094419eb8e 181 Gene3D G3DSA:3.40.50.2020 1 181 1.2E-61 T 11-10-2018 ABE28_007605 fbad91337d5f766a8267e6094419eb8e 181 SUPERFAMILY SSF53271 7 175 1.1E-42 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like ABE28_007605 fbad91337d5f766a8267e6094419eb8e 181 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 5 180 38.493 T 11-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 ABE28_013500 1cb53f996c87a35cbba57b527f012ee1 145 Gene3D G3DSA:3.40.930.10 3 145 1.5E-50 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_013500 1cb53f996c87a35cbba57b527f012ee1 145 SUPERFAMILY SSF55804 7 141 1.7E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 ABE28_013500 1cb53f996c87a35cbba57b527f012ee1 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 142 3.3E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain ABE28_020985 7fb5bdb00ff0610cbb21ca409fdf6a36 76 Pfam PF01381 Helix-turn-helix 18 61 1.0E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_020985 7fb5bdb00ff0610cbb21ca409fdf6a36 76 SUPERFAMILY SSF47413 13 61 3.15E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_020985 7fb5bdb00ff0610cbb21ca409fdf6a36 76 Gene3D G3DSA:1.10.260.40 10 65 8.6E-7 T 11-10-2018 ABE28_004555 bde0fee4c63030c58a9b6a82cba6153c 285 Pfam PF12671 Putative amidase domain 126 277 1.2E-37 T 11-10-2018 IPR024301 Putative amidase domain ABE28_020085 fdaa710fc1aae9121eea0bf2ac37fd87 175 Gene3D G3DSA:1.20.120.450 2 172 1.2E-30 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_020085 fdaa710fc1aae9121eea0bf2ac37fd87 175 Pfam PF04978 Protein of unknown function (DUF664) 25 162 4.5E-12 T 11-10-2018 IPR007061 Protein of unknown function DUF664 ABE28_020085 fdaa710fc1aae9121eea0bf2ac37fd87 175 SUPERFAMILY SSF109854 8 169 3.66E-27 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_007350 00c2b4e97b5f84d79606de4b3d587052 107 Pfam PF14539 Domain of unknown function (DUF4442) 44 107 4.9E-6 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 ABE28_007350 00c2b4e97b5f84d79606de4b3d587052 107 SUPERFAMILY SSF54637 41 105 2.68E-12 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_007350 00c2b4e97b5f84d79606de4b3d587052 107 Gene3D G3DSA:3.10.129.10 2 107 2.2E-18 T 11-10-2018 ABE28_022505 de8d92f9e8bf000002150baa85236aae 341 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 94 242 8.1E-41 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_022505 de8d92f9e8bf000002150baa85236aae 341 Gene3D G3DSA:1.10.260.150 57 340 3.6E-86 T 11-10-2018 ABE28_022505 de8d92f9e8bf000002150baa85236aae 341 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 94 241 1.9E-45 T 11-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain ABE28_021205 1c1e1094dea9f61c397b0471ad9884c1 384 SUPERFAMILY SSF54060 166 377 9.89E-59 T 11-10-2018 ABE28_021205 1c1e1094dea9f61c397b0471ad9884c1 384 Pfam PF04231 Endonuclease I 169 377 1.1E-42 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 ABE28_010370 7659153952b4d22d96c515f3b52acaf9 66 Pfam PF02416 mttA/Hcf106 family 5 56 5.5E-22 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 ABE28_010370 7659153952b4d22d96c515f3b52acaf9 66 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 6.5E-5 T 11-10-2018 ABE28_010370 7659153952b4d22d96c515f3b52acaf9 66 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 6.5E-5 T 11-10-2018 ABE28_010370 7659153952b4d22d96c515f3b52acaf9 66 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 61 17.144 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_010370 7659153952b4d22d96c515f3b52acaf9 66 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 48 1.1E-18 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 ABE28_021050 d23ce727052d68a9701190048ec953c5 393 Gene3D G3DSA:3.40.1710.10 35 159 5.0E-6 T 11-10-2018 ABE28_021050 d23ce727052d68a9701190048ec953c5 393 Pfam PF12698 ABC-2 family transporter protein 17 363 1.2E-10 T 11-10-2018 ABE28_019385 a515eac03f353a5c891454e60201b52e 522 TIGRFAM TIGR03605 antibiot_sagB: SagB-type dehydrogenase domain 66 236 5.4E-44 T 11-10-2018 IPR020051 SagB-type dehydrogenase domain ABE28_019385 a515eac03f353a5c891454e60201b52e 522 Gene3D G3DSA:3.40.109.10 343 515 3.9E-22 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_019385 a515eac03f353a5c891454e60201b52e 522 Gene3D G3DSA:3.40.109.10 23 296 7.5E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_019385 a515eac03f353a5c891454e60201b52e 522 SUPERFAMILY SSF55469 426 515 1.05E-8 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_001745 60684800d929c95949af86c9fad7ed8c 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 2.6E-8 T 11-10-2018 IPR024962 YukD-like ABE28_001745 60684800d929c95949af86c9fad7ed8c 79 Gene3D G3DSA:3.10.20.90 1 79 9.4E-33 T 11-10-2018 ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 Pfam PF13229 Right handed beta helix region 143 333 2.7E-11 T 11-10-2018 IPR039448 Right handed beta helix domain ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SUPERFAMILY SSF51126 44 461 2.8E-63 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 Gene3D G3DSA:2.160.20.10 30 461 5.6E-61 T 11-10-2018 IPR012334 Pectin lyase fold ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SMART SM00710 309 331 3.9 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SMART SM00710 211 233 510.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SMART SM00710 246 280 670.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SMART SM00710 151 180 62.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_010235 a55cd4b2d806ce47852697871ce2e1cc 465 SMART SM00710 281 302 160.0 T 11-10-2018 IPR006626 Parallel beta-helix repeat ABE28_006885 ea70f248e28f9b95bd07f57ba8a13932 113 Pfam PF13045 Protein of unknown function (DUF3905) 9 91 4.8E-45 T 11-10-2018 IPR024999 Protein of unknown function DUF3905 ABE28_003645 6edcf8185274ab1b6a5ba6b3cd9388a9 83 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 8 82 7.0E-26 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 ABE28_003645 6edcf8185274ab1b6a5ba6b3cd9388a9 83 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 9 82 2.0E-26 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 ABE28_006265 8274bfdaef7c811d7faa33a36b5a3413 84 Pfam PF14069 Stage VI sporulation protein F 6 75 2.1E-26 T 11-10-2018 IPR025942 Stage VI sporulation protein F ABE28_012050 c594ab6d4848419b0104f7329c5034c6 299 Pfam PF01925 Sulfite exporter TauE/SafE 7 249 1.3E-39 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 Pfam PF01765 Ribosome recycling factor 22 183 9.7E-65 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 Gene3D G3DSA:3.30.1360.40 31 105 1.5E-70 T 11-10-2018 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.8E-76 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 28.378 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 Gene3D G3DSA:1.10.132.20 12 182 1.5E-70 T 11-10-2018 ABE28_008110 ff3b534e528ccdcc479449cead987516 185 SUPERFAMILY SSF55194 4 184 2.49E-72 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 ABE28_014590 c21ba9dad418d3816838d205d0926906 207 Pfam PF12164 Stage V sporulation protein AA 5 89 4.2E-17 T 11-10-2018 IPR021997 Stage V sporulation protein AA ABE28_014590 c21ba9dad418d3816838d205d0926906 207 Gene3D G3DSA:2.60.480.10 1 96 1.6E-9 T 11-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily ABE28_015100 60c81f4830c35777fabd1a046229ee2a 128 Pfam PF14173 ComG operon protein 7 32 124 4.0E-11 T 11-10-2018 IPR020372 Competence operon G protein 7, ComGG ABE28_020370 e587ab92a7d4ebbf2a22c4ad427eadfa 178 Pfam PF04229 GrpB protein 4 162 2.6E-51 T 11-10-2018 IPR007344 GrpB/Dephospho-CoA kinase ABE28_020370 e587ab92a7d4ebbf2a22c4ad427eadfa 178 SUPERFAMILY SSF81301 6 165 1.05E-51 T 11-10-2018 ABE28_020370 e587ab92a7d4ebbf2a22c4ad427eadfa 178 Gene3D G3DSA:3.30.460.10 1 169 9.9E-58 T 11-10-2018 ABE28_003595 6cad4838f3d998f8d4f6c24f8906b59d 306 Pfam PF08338 Domain of unknown function (DUF1731) 253 298 7.1E-18 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 ABE28_003595 6cad4838f3d998f8d4f6c24f8906b59d 306 Gene3D G3DSA:3.40.50.720 2 304 4.2E-70 T 11-10-2018 ABE28_003595 6cad4838f3d998f8d4f6c24f8906b59d 306 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 125 5.2E-7 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 ABE28_003595 6cad4838f3d998f8d4f6c24f8906b59d 306 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 5.1E-105 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 ABE28_003595 6cad4838f3d998f8d4f6c24f8906b59d 306 SUPERFAMILY SSF51735 1 297 4.85E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_011550 f2cba4b42e26b52ac7b53e61ac837959 390 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 7 388 3.0E-148 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ABE28_020515 9bf423d67179d792fd1e4d19342334c9 240 Pfam PF14080 Domain of unknown function (DUF4261) 156 231 3.5E-8 T 11-10-2018 IPR025357 Domain of unknown function DUF4261 ABE28_022720 48e6d626cab81b4197002cee870a1019 282 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 147 1.3E-24 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G ABE28_022720 48e6d626cab81b4197002cee870a1019 282 Pfam PF00460 Flagella basal body rod protein 6 35 2.0E-6 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 ABE28_022720 48e6d626cab81b4197002cee870a1019 282 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 227 279 9.2E-16 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain ABE28_022720 48e6d626cab81b4197002cee870a1019 282 SUPERFAMILY SSF117143 93 206 3.01E-8 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like ABE28_013840 7a3528b033543bbf78a3f016d27ceae7 149 Pfam PF17370 Family of unknown function (DUF5392) 5 141 2.1E-46 T 11-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane ABE28_013840 7a3528b033543bbf78a3f016d27ceae7 149 ProDom PD087515 YWNF MEMBRANE SYNTHASE BH1886 BETA-KETOACYL TRANSMEMBRANE 4 141 1.0E-12 T 11-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane ABE28_014805 aa40fb34d99ed60ef8b8fa297f0efc13 140 SUPERFAMILY SSF54593 1 132 1.14E-31 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014805 aa40fb34d99ed60ef8b8fa297f0efc13 140 Gene3D G3DSA:3.10.180.10 1 132 1.7E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014805 aa40fb34d99ed60ef8b8fa297f0efc13 140 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 4.8E-23 T 11-10-2018 ABE28_014805 aa40fb34d99ed60ef8b8fa297f0efc13 140 TIGRFAM TIGR03081 metmalonyl_epim: methylmalonyl-CoA epimerase 4 131 3.6E-46 T 11-10-2018 IPR017515 Methylmalonyl-CoA epimerase KEGG: 00280+5.1.99.1|KEGG: 00630+5.1.99.1|KEGG: 00640+5.1.99.1|KEGG: 00720+5.1.99.1|MetaCyc: PWY-5741|MetaCyc: PWY-5743|MetaCyc: PWY-5789|MetaCyc: PWY-6728|MetaCyc: PWY-7384|MetaCyc: PWY-7854|Reactome: R-HSA-71032 ABE28_018675 ba3258e9a6088d27aa6725491ca636ca 300 SUPERFAMILY SSF103481 193 285 1.44E-10 T 11-10-2018 ABE28_018675 ba3258e9a6088d27aa6725491ca636ca 300 Pfam PF00892 EamA-like transporter family 152 283 7.1E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_018675 ba3258e9a6088d27aa6725491ca636ca 300 Pfam PF00892 EamA-like transporter family 9 139 1.6E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 ABE28_018675 ba3258e9a6088d27aa6725491ca636ca 300 SUPERFAMILY SSF103481 46 142 2.88E-9 T 11-10-2018 ABE28_008000 a40912d3a419e5dda13ea38d5bb44306 142 Pfam PF03748 Flagellar basal body-associated protein FliL 50 142 1.7E-17 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 ABE28_006200 39dfd2c53efe70eddf9357ae79905fc9 264 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.871 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_006200 39dfd2c53efe70eddf9357ae79905fc9 264 Pfam PF01513 ATP-NAD kinase 30 183 2.0E-22 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_006200 39dfd2c53efe70eddf9357ae79905fc9 264 SUPERFAMILY SSF111331 15 261 9.55E-63 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily ABE28_006200 39dfd2c53efe70eddf9357ae79905fc9 264 Gene3D G3DSA:2.60.200.30 102 240 4.3E-98 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 ABE28_006200 39dfd2c53efe70eddf9357ae79905fc9 264 Gene3D G3DSA:3.40.50.10330 16 262 4.3E-98 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 Gene3D G3DSA:3.30.300.30 131 221 8.8E-9 T 11-10-2018 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 532 1.7E-124 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 1.4E-57 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PIRSF PIRSF004862 1 532 2.3E-100 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PRINTS PR01009 Flagellar M-ring protein signature 122 140 6.1E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PRINTS PR01009 Flagellar M-ring protein signature 154 168 6.1E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PRINTS PR01009 Flagellar M-ring protein signature 269 287 6.1E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PRINTS PR01009 Flagellar M-ring protein signature 348 372 6.1E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 PRINTS PR01009 Flagellar M-ring protein signature 198 216 6.1E-20 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 ABE28_007945 5fa107f4b549403f0312afc45b2b0a69 532 Pfam PF08345 Flagellar M-ring protein C-terminal 256 398 4.8E-20 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal ABE28_010890 9a1b7bc2ab4040077755d13c54fe973f 337 Pfam PF00294 pfkB family carbohydrate kinase 3 316 3.5E-31 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_010890 9a1b7bc2ab4040077755d13c54fe973f 337 SUPERFAMILY SSF53613 1 325 1.34E-60 T 11-10-2018 IPR029056 Ribokinase-like ABE28_010890 9a1b7bc2ab4040077755d13c54fe973f 337 Gene3D G3DSA:3.40.1190.20 2 337 7.4E-99 T 11-10-2018 IPR029056 Ribokinase-like ABE28_001945 39ba9e56c5a0adda1c7d08055452ac84 88 Pfam PF11127 Protein of unknown function (DUF2892) 4 65 9.4E-9 T 11-10-2018 IPR021309 Protein of unknown function DUF2892 ABE28_006105 a552bea4df6fe0eac0a48310fd246145 252 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 66 251 2.3E-44 T 11-10-2018 IPR018728 Domain of unknown function DUF2268 ABE28_015140 ba613b6eeb43084c9253e1d40276dcd9 233 SUPERFAMILY SSF46785 1 203 1.5E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_015140 ba613b6eeb43084c9253e1d40276dcd9 233 Gene3D G3DSA:1.10.10.10 7 79 1.9E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_015140 ba613b6eeb43084c9253e1d40276dcd9 233 Gene3D G3DSA:3.30.1380.20 80 232 2.8E-6 T 11-10-2018 ABE28_015140 ba613b6eeb43084c9253e1d40276dcd9 233 SMART SM00418 6 88 0.0076 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 ABE28_015280 681601f3c2750f0914a0b616f99eb93a 110 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 109 5.0E-14 T 11-10-2018 IPR020506 Uncharacterised protein family YqfZ ABE28_015280 681601f3c2750f0914a0b616f99eb93a 110 Gene3D G3DSA:3.10.350.10 54 107 1.2E-6 T 11-10-2018 IPR036779 LysM domain superfamily ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 SUPERFAMILY SSF46977 415 511 4.19E-21 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 Pfam PF02910 Fumarate reductase flavoprotein C-term 415 508 7.4E-13 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 Pfam PF00890 FAD binding domain 6 372 5.2E-77 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 Gene3D G3DSA:3.90.700.10 230 327 4.0E-130 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 493 9.5E-160 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 SUPERFAMILY SSF56425 222 332 4.49E-29 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.4E-9 T 11-10-2018 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 335 357 1.4E-9 T 11-10-2018 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 Gene3D G3DSA:1.20.58.100 402 508 2.6E-16 T 11-10-2018 ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 Gene3D G3DSA:3.50.50.60 6 383 4.0E-130 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_016280 e6c733b2cbf8e486cce7d5ea718b704f 527 SUPERFAMILY SSF51905 2 390 1.51E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_005760 99e67ffff25c97b472f7d6e43dc96c21 402 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 385 6.4E-123 T 11-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 ABE28_005760 99e67ffff25c97b472f7d6e43dc96c21 402 PIRSF PIRSF037259 1 402 8.2E-122 T 11-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 ABE28_008170 62c243637e7ee5536f79602bc78ff580 93 Pfam PF04456 Protein of unknown function (DUF503) 3 88 1.7E-30 T 11-10-2018 IPR007546 Protein of unknown function DUF503 ABE28_008170 62c243637e7ee5536f79602bc78ff580 93 SUPERFAMILY SSF103007 1 93 1.7E-30 T 11-10-2018 IPR036746 TT1725-like superfamily ABE28_008170 62c243637e7ee5536f79602bc78ff580 93 Gene3D G3DSA:3.30.70.1120 1 92 4.1E-23 T 11-10-2018 IPR036746 TT1725-like superfamily ABE28_008250 8b5e56cff98a666230a0abffb583cc94 76 Pfam PF14035 YlzJ-like protein 3 67 3.5E-20 T 11-10-2018 IPR025619 YlzJ-like protein ABE28_002830 1692d25d298f2161d8773f3ff6d4aac3 214 Gene3D G3DSA:1.10.3720.10 1 213 1.4E-58 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002830 1692d25d298f2161d8773f3ff6d4aac3 214 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 29 212 1.2E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_002830 1692d25d298f2161d8773f3ff6d4aac3 214 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 106 7.1E-30 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 ABE28_002830 1692d25d298f2161d8773f3ff6d4aac3 214 SUPERFAMILY SSF161098 9 197 4.06E-49 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_002140 f7cd7940cb57bd19e1ee693053992459 157 SUPERFAMILY SSF55826 5 153 4.71E-36 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_002140 f7cd7940cb57bd19e1ee693053992459 157 Gene3D G3DSA:3.90.960.10 1 157 1.1E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 ABE28_002140 f7cd7940cb57bd19e1ee693053992459 157 Pfam PF04073 Aminoacyl-tRNA editing domain 26 140 7.8E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 ABE28_012515 fe326507bcc87d5c472a962b29bf25dc 336 Gene3D G3DSA:1.10.1530.10 12 327 4.7E-122 T 11-10-2018 ABE28_012515 fe326507bcc87d5c472a962b29bf25dc 336 Gene3D G3DSA:3.30.1370.60 70 308 4.7E-122 T 11-10-2018 ABE28_012515 fe326507bcc87d5c472a962b29bf25dc 336 SUPERFAMILY SSF89733 4 335 3.01E-115 T 11-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 ABE28_012515 fe326507bcc87d5c472a962b29bf25dc 336 Pfam PF02615 Malate/L-lactate dehydrogenase 6 334 2.1E-122 T 11-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 ABE28_007225 6d76aff0fac3713986451938dec672da 259 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 259 31.051 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007225 6d76aff0fac3713986451938dec672da 259 Gene3D G3DSA:3.20.20.70 1 259 1.2E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_007225 6d76aff0fac3713986451938dec672da 259 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007225 6d76aff0fac3713986451938dec672da 259 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 9 257 2.6E-68 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_007225 6d76aff0fac3713986451938dec672da 259 SUPERFAMILY SSF51366 1 251 5.37E-77 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 ABE28_007225 6d76aff0fac3713986451938dec672da 259 Pfam PF00290 Tryptophan synthase alpha chain 9 250 5.3E-80 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 ABE28_005800 00b7b80d8fb0802b5231696706cc58e1 42 Pfam PF14149 YhfH-like protein 2 38 8.3E-22 T 11-10-2018 IPR025432 YhfH-like protein ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 6 434 37.181 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 337 360 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 4 434 1.1E-237 T 11-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 Pfam PF01134 Glucose inhibited division protein A 5 367 3.3E-116 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 Gene3D G3DSA:3.50.50.60 3 178 2.7E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 Gene3D G3DSA:3.50.50.60 291 435 8.3E-53 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007905 3452edab397a428794349eb1bb1cb98b 435 SUPERFAMILY SSF51905 2 366 3.99E-29 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily ABE28_007030 c043a9e6d34d6532e3c4c1cbedf6d32a 126 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 114 7.7E-20 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABE28_007030 c043a9e6d34d6532e3c4c1cbedf6d32a 126 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 119 16.186 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 ABE28_021030 6e213496d9c37fc8c0bd23abc8752b87 169 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 1 166 3.9E-61 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 ABE28_021030 6e213496d9c37fc8c0bd23abc8752b87 169 SUPERFAMILY SSF110391 1 167 2.09E-58 T 11-10-2018 IPR035928 GlpP-like superfamily ABE28_021030 6e213496d9c37fc8c0bd23abc8752b87 169 Gene3D G3DSA:3.20.20.400 1 168 1.3E-63 T 11-10-2018 IPR035928 GlpP-like superfamily ABE28_021030 6e213496d9c37fc8c0bd23abc8752b87 169 PIRSF PIRSF016897 1 169 9.5E-61 T 11-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 ABE28_014020 5b118aa488cac691b7696864895d6ef0 237 Pfam PF14179 YppG-like protein 120 235 3.8E-11 T 11-10-2018 IPR025555 YppG-like protein ABE28_023170 8188880badde43175cc09a484966782a 115 Pfam PF08830 Protein of unknown function (DUF1806) 3 114 2.7E-51 T 11-10-2018 IPR014934 Protein of unknown function DUF1806 ABE28_023170 8188880badde43175cc09a484966782a 115 SUPERFAMILY SSF89442 1 115 1.96E-52 T 11-10-2018 IPR036492 Hypothetical protein YojF superfamily ABE28_023170 8188880badde43175cc09a484966782a 115 Gene3D G3DSA:2.70.180.10 1 115 6.5E-47 T 11-10-2018 IPR036492 Hypothetical protein YojF superfamily ABE28_019795 0ef1af817982fc6693bf6fec36fc6eb5 132 Pfam PF14534 Domain of unknown function (DUF4440) 9 115 5.5E-8 T 11-10-2018 IPR027843 Domain of unknown function DUF4440 ABE28_019795 0ef1af817982fc6693bf6fec36fc6eb5 132 SUPERFAMILY SSF54427 1 124 2.2E-31 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_019795 0ef1af817982fc6693bf6fec36fc6eb5 132 Gene3D G3DSA:3.10.450.50 1 132 2.7E-42 T 11-10-2018 ABE28_024220 2b59ffe88ff904030784f2611da9d901 150 SUPERFAMILY SSF48452 27 132 1.39E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_024220 2b59ffe88ff904030784f2611da9d901 150 Gene3D G3DSA:1.25.40.10 20 150 1.3E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 ABE28_005605 b151719a5a88c116ac976296982ef6d3 288 SUPERFAMILY SSF56784 3 273 3.13E-55 T 11-10-2018 IPR036412 HAD-like superfamily ABE28_005605 b151719a5a88c116ac976296982ef6d3 288 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 267 8.8E-43 T 11-10-2018 IPR000150 Cof family GO:0016787 ABE28_005605 b151719a5a88c116ac976296982ef6d3 288 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 268 7.1E-53 T 11-10-2018 ABE28_005605 b151719a5a88c116ac976296982ef6d3 288 Gene3D G3DSA:3.30.1240.10 83 196 4.1E-40 T 11-10-2018 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 Pfam PF00258 Flavodoxin 7 136 2.3E-31 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 TIGRFAM TIGR01753 flav_short: flavodoxin 4 143 5.5E-50 T 11-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 PRINTS PR00369 Flavodoxin signature 5 18 1.8E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 PRINTS PR00369 Flavodoxin signature 83 93 1.8E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 PRINTS PR00369 Flavodoxin signature 54 65 1.8E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 PRINTS PR00369 Flavodoxin signature 107 126 1.8E-6 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 Gene3D G3DSA:3.40.50.360 1 147 6.4E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_008585 5c188d71b3f98e6b5e8260afc0dc384f 152 SUPERFAMILY SSF52218 2 145 3.11E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_024025 f618f24b2bbee86c9ca08e231c3c3946 253 SUPERFAMILY SSF51621 6 246 1.21E-50 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 ABE28_024025 f618f24b2bbee86c9ca08e231c3c3946 253 Gene3D G3DSA:3.20.20.60 1 250 2.2E-59 T 11-10-2018 ABE28_024025 f618f24b2bbee86c9ca08e231c3c3946 253 Pfam PF13714 Phosphoenolpyruvate phosphomutase 9 246 2.7E-63 T 11-10-2018 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 SUPERFAMILY SSF55979 133 248 2.51E-26 T 11-10-2018 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 126 1.2E-19 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 SUPERFAMILY SSF55979 1 126 1.84E-17 T 11-10-2018 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 252 363 1.2E-21 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 375 8.0E-83 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 PIRSF PIRSF000804 1 377 8.3E-85 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 Gene3D G3DSA:3.70.10.10 144 374 4.9E-99 T 11-10-2018 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 SUPERFAMILY SSF55979 252 375 2.04E-19 T 11-10-2018 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 SMART SM00480 17 372 4.2E-91 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 248 8.1E-29 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 ABE28_009885 e15878bed940f776055ebc8fea64fdaf 377 Gene3D G3DSA:3.10.150.10 1 247 4.9E-99 T 11-10-2018 ABE28_010020 c70cd404873130a518e1fcd0beac1279 126 Pfam PF13799 Domain of unknown function (DUF4183) 39 112 5.7E-17 T 11-10-2018 IPR025237 Domain of unknown function DUF4183 ABE28_008210 d6c0f5892a5bf60f2da686862aed361f 88 SUPERFAMILY SSF50346 2 74 5.02E-11 T 11-10-2018 IPR011033 PRC-barrel-like superfamily ABE28_008210 d6c0f5892a5bf60f2da686862aed361f 88 Gene3D G3DSA:2.30.30.240 2 77 6.5E-8 T 11-10-2018 ABE28_008210 d6c0f5892a5bf60f2da686862aed361f 88 Pfam PF05239 PRC-barrel domain 2 76 3.3E-13 T 11-10-2018 IPR027275 PRC-barrel domain ABE28_008210 d6c0f5892a5bf60f2da686862aed361f 88 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 75 5.1E-28 T 11-10-2018 IPR014238 Sporulation protein YlmC/YmxH ABE28_014640 b568b71632b20b2413fadbe843af111b 75 Pfam PF14004 Protein of unknown function (DUF4227) 8 75 5.7E-29 T 11-10-2018 IPR025321 Protein of unknown function DUF4227 ABE28_002135 b5732dfc5d8739e14c6f95656a2f91a6 161 PIRSF PIRSF031501 1 161 3.5E-56 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 ABE28_002135 b5732dfc5d8739e14c6f95656a2f91a6 161 Pfam PF06177 QueT transporter 6 153 3.0E-33 T 11-10-2018 IPR010387 Queuosine precursor transporter QueT GO:0005886 ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 Gene3D G3DSA:3.20.20.100 1 321 5.0E-118 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 PRINTS PR00069 Aldo-keto reductase signature 103 121 1.5E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 PRINTS PR00069 Aldo-keto reductase signature 236 260 1.5E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 PRINTS PR00069 Aldo-keto reductase signature 42 66 1.5E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 SUPERFAMILY SSF51430 1 305 3.01E-98 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily ABE28_004310 7740d2ee2b992435136200456d1b0ba6 321 Pfam PF00248 Aldo/keto reductase family 16 300 6.1E-76 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain ABE28_009145 6caff7b7138d3c7b46ed5f74a6f0b893 78 Pfam PF17356 Phage-like element PBSX protein XtrA 14 78 3.9E-27 T 11-10-2018 IPR035530 Phage-like element PBSX protein XtrA ABE28_012985 3e88679f594b5e1ca38bf82220579dac 245 Pfam PF01522 Polysaccharide deacetylase 34 141 1.0E-23 T 11-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 ABE28_012985 3e88679f594b5e1ca38bf82220579dac 245 SUPERFAMILY SSF88713 30 239 1.19E-46 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 ABE28_012985 3e88679f594b5e1ca38bf82220579dac 245 Gene3D G3DSA:3.20.20.370 18 243 5.4E-56 T 11-10-2018 ABE28_008675 b8e0f14d50666b0e72fef29ec358d320 449 PIRSF PIRSF006351 1 446 8.8E-122 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 ABE28_008675 b8e0f14d50666b0e72fef29ec358d320 449 Pfam PF02378 Phosphotransferase system, EIIC 26 364 2.8E-49 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_008675 b8e0f14d50666b0e72fef29ec358d320 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 436 5.1E-110 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 ABE28_000040 491f46e15d83416518d87e3c6c7b45f2 223 SUPERFAMILY SSF52540 12 216 6.04E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_000040 491f46e15d83416518d87e3c6c7b45f2 223 Pfam PF01712 Deoxynucleoside kinase 15 213 9.8E-66 T 11-10-2018 IPR031314 Deoxynucleoside kinase domain ABE28_000040 491f46e15d83416518d87e3c6c7b45f2 223 PIRSF PIRSF000705 2 220 4.2E-67 T 11-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 ABE28_000040 491f46e15d83416518d87e3c6c7b45f2 223 Gene3D G3DSA:3.40.50.300 12 217 5.3E-60 T 11-10-2018 ABE28_017880 044388e77888623aedeb0b3f2b9e38c6 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 3 350 9.9E-55 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_017880 044388e77888623aedeb0b3f2b9e38c6 366 Pfam PF03845 Spore germination protein 4 317 7.8E-26 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_003225 42dc26c505232a10578cfa51504b9e3f 191 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 4 159 1.7E-22 T 11-10-2018 IPR006490 Phage major tail protein, phi13 family ABE28_003225 42dc26c505232a10578cfa51504b9e3f 191 Pfam PF04630 Phage tail tube protein 6 167 2.4E-16 T 11-10-2018 IPR006724 Phage tail tube protein 1 ABE28_017920 f97721b442f77e02e4ebd07205b4d8b3 104 Gene3D G3DSA:1.10.3730.20 1 104 5.9E-23 T 11-10-2018 ABE28_017920 f97721b442f77e02e4ebd07205b4d8b3 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 4.3E-25 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 ABE28_017920 f97721b442f77e02e4ebd07205b4d8b3 104 SUPERFAMILY SSF103481 6 102 1.44E-17 T 11-10-2018 ABE28_012580 6e7d3406569f311eb064bb4a7ed1bf0c 409 Gene3D G3DSA:3.40.50.2000 14 394 7.3E-69 T 11-10-2018 ABE28_012580 6e7d3406569f311eb064bb4a7ed1bf0c 409 Gene3D G3DSA:3.40.50.2000 206 386 7.3E-69 T 11-10-2018 ABE28_012580 6e7d3406569f311eb064bb4a7ed1bf0c 409 Pfam PF00534 Glycosyl transferases group 1 219 381 3.5E-38 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_012580 6e7d3406569f311eb064bb4a7ed1bf0c 409 SUPERFAMILY SSF53756 2 404 1.38E-79 T 11-10-2018 ABE28_012580 6e7d3406569f311eb064bb4a7ed1bf0c 409 Pfam PF13439 Glycosyltransferase Family 4 14 209 8.3E-18 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 ABE28_019345 faf39d2896a73fda84414951305c0fa8 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 72 265 4.7E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019345 faf39d2896a73fda84414951305c0fa8 273 Gene3D G3DSA:1.10.3720.10 11 270 1.5E-56 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_019345 faf39d2896a73fda84414951305c0fa8 273 SUPERFAMILY SSF161098 2 263 1.44E-53 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_022525 eb266bfa0ebf86f9050c746d568b8158 476 Pfam PF04932 O-Antigen ligase 236 411 3.3E-19 T 11-10-2018 IPR007016 O-antigen ligase-related ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 127 364 8.1E-20 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 SUPERFAMILY SSF51735 3 167 1.57E-22 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 Gene3D G3DSA:3.40.50.720 2 117 2.2E-20 T 11-10-2018 ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 Gene3D G3DSA:3.30.360.10 129 313 6.0E-43 T 11-10-2018 ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 4 122 4.9E-16 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 ABE28_009720 e3eb4c618656a0ea3b114c26ce531fc9 380 Gene3D G3DSA:3.40.50.720 314 378 1.7E-8 T 11-10-2018 ABE28_009610 6bca9eb063ea9853c2daa751ae024d02 164 Gene3D G3DSA:1.20.120.450 23 156 5.3E-17 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_009610 6bca9eb063ea9853c2daa751ae024d02 164 SUPERFAMILY SSF109854 1 158 4.4E-25 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_009610 6bca9eb063ea9853c2daa751ae024d02 164 Pfam PF12867 DinB superfamily 24 148 3.0E-10 T 11-10-2018 IPR024775 DinB-like domain ABE28_009045 ffc3ef3b345d064b4a361e25502bdf60 117 ProDom PD596757 GP16 LIN0124/LIN2378/LIN2564 4 108 0.002 T 11-10-2018 ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 Gene3D G3DSA:3.40.50.720 7 319 2.2E-92 T 11-10-2018 ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 Gene3D G3DSA:3.30.360.10 128 341 2.2E-92 T 11-10-2018 ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 123 1.8E-32 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 SUPERFAMILY SSF51735 3 153 2.4E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 194 3.8E-8 T 11-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 ABE28_002255 d43a37cc51e18168ae689e877e159b10 346 SUPERFAMILY SSF55347 132 318 2.94E-28 T 11-10-2018 ABE28_005585 ea338f744cb755ee75c47edb83914181 455 SUPERFAMILY SSF56059 213 416 6.36E-10 T 11-10-2018 ABE28_005585 ea338f744cb755ee75c47edb83914181 455 Pfam PF14398 YheC/D like ATP-grasp 187 442 3.3E-82 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D ABE28_005585 ea338f744cb755ee75c47edb83914181 455 Gene3D G3DSA:3.30.470.20 311 434 6.0E-5 T 11-10-2018 ABE28_009670 8a6ac853db4428bed5f6f004d6ce30e8 283 SUPERFAMILY SSF81301 26 68 7.09E-7 T 11-10-2018 ABE28_009670 8a6ac853db4428bed5f6f004d6ce30e8 283 Gene3D G3DSA:3.30.460.10 21 148 5.9E-13 T 11-10-2018 ABE28_009670 8a6ac853db4428bed5f6f004d6ce30e8 283 SUPERFAMILY SSF81301 30 139 5.89E-6 T 11-10-2018 ABE28_009670 8a6ac853db4428bed5f6f004d6ce30e8 283 Pfam PF01909 Nucleotidyltransferase domain 30 68 1.8E-4 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 ABE28_009705 7ead572c09488e05afd0ce4df9f84992 689 SUPERFAMILY SSF53067 8 487 4.91E-11 T 11-10-2018 ABE28_009705 7ead572c09488e05afd0ce4df9f84992 689 Pfam PF01968 Hydantoinase/oxoprolinase 206 493 5.9E-101 T 11-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ABE28_009705 7ead572c09488e05afd0ce4df9f84992 689 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 8 185 4.7E-55 T 11-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ABE28_015900 a142ae324fa90c50be939f787031e46d 207 SUPERFAMILY SSF52540 55 202 3.68E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_015900 a142ae324fa90c50be939f787031e46d 207 Gene3D G3DSA:3.40.50.300 14 206 4.4E-33 T 11-10-2018 ABE28_020965 bde6e39056ed4bdad87df0ca00f08723 235 PRINTS PR01837 MgtC/SapB protein signature 103 127 1.0E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABE28_020965 bde6e39056ed4bdad87df0ca00f08723 235 PRINTS PR01837 MgtC/SapB protein signature 75 97 1.0E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABE28_020965 bde6e39056ed4bdad87df0ca00f08723 235 PRINTS PR01837 MgtC/SapB protein signature 20 39 1.0E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABE28_020965 bde6e39056ed4bdad87df0ca00f08723 235 PRINTS PR01837 MgtC/SapB protein signature 39 57 1.0E-41 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABE28_020965 bde6e39056ed4bdad87df0ca00f08723 235 Pfam PF02308 MgtC family 17 147 1.8E-33 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 Pfam PF00005 ABC transporter 17 162 3.0E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 Gene3D G3DSA:3.40.50.300 1 235 1.9E-67 T 11-10-2018 ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 SUPERFAMILY SSF52540 2 232 2.0E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 SMART SM00382 26 211 1.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 PIRSF PIRSF039137 1 235 4.0E-115 T 11-10-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 ABE28_016090 804ee3162efe7c58b8d87fc93d2f22f3 235 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 ABE28_014595 2736608c0ade30abc27ecc612db73b1b 429 PIRSF PIRSF005353 1 428 1.5E-168 T 11-10-2018 IPR026033 Purine permease PbuG-like ABE28_014595 2736608c0ade30abc27ecc612db73b1b 429 Pfam PF00860 Permease family 17 389 2.1E-62 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_014755 d08bf45c1cd19b80653c2f8df4c25915 343 Pfam PF02653 Branched-chain amino acid transport system / permease component 5 299 6.7E-27 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_019030 276eededed3430c66f22dc549f556748 159 SUPERFAMILY SSF54197 10 127 5.1E-18 T 11-10-2018 IPR036265 HIT-like superfamily ABE28_019030 276eededed3430c66f22dc549f556748 159 Gene3D G3DSA:3.30.428.10 2 158 9.8E-20 T 11-10-2018 IPR036265 HIT-like superfamily ABE28_018240 66f72c62d67dffc03c40258c5f428cdb 248 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 132 245 7.8E-35 T 11-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF ABE28_018240 66f72c62d67dffc03c40258c5f428cdb 248 PIRSF PIRSF031509 4 248 8.2E-57 T 11-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 ABE28_018055 34aacf56c5b79f8be4d81dd7eef63ef2 149 SUPERFAMILY SSF82784 1 131 1.16E-33 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ABE28_018055 34aacf56c5b79f8be4d81dd7eef63ef2 149 Pfam PF02566 OsmC-like protein 33 129 5.2E-17 T 11-10-2018 IPR003718 OsmC/Ohr family ABE28_018055 34aacf56c5b79f8be4d81dd7eef63ef2 149 Gene3D G3DSA:3.30.300.20 1 133 5.1E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_021505 ec81c67586e379e811a2a0f6e415cc20 126 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 5 120 1.3E-37 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 ABE28_021505 ec81c67586e379e811a2a0f6e415cc20 126 Pfam PF03061 Thioesterase superfamily 35 113 1.1E-17 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 ABE28_021505 ec81c67586e379e811a2a0f6e415cc20 126 SUPERFAMILY SSF54637 5 124 1.17E-32 T 11-10-2018 IPR029069 HotDog domain superfamily ABE28_021505 ec81c67586e379e811a2a0f6e415cc20 126 Gene3D G3DSA:3.10.129.10 1 126 1.0E-52 T 11-10-2018 ABE28_009845 d613640cba7ad26fb542e134d698e87f 232 Gene3D G3DSA:2.60.120.480 12 203 1.3E-5 T 11-10-2018 IPR024060 Ureidoglycolate lyase domain superfamily GO:0004848 KEGG: 00230+4.3.2.3|MetaCyc: PWY-5694|MetaCyc: PWY-5705 ABE28_009845 d613640cba7ad26fb542e134d698e87f 232 Pfam PF16161 Domain of unknown function (DUF4867) 18 219 2.5E-84 T 11-10-2018 IPR032358 Protein of unknown function DUF4867 ABE28_023485 46920b98ab60a28146dfc7dcf4969a19 251 Pfam PF06738 Putative threonine/serine exporter 12 249 4.7E-76 T 11-10-2018 IPR010619 Putative threonine/serine exporter ABE28_014865 16d766292da90810f4a49f570a2cfe8e 331 Pfam PF00676 Dehydrogenase E1 component 20 320 1.3E-107 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 ABE28_014865 16d766292da90810f4a49f570a2cfe8e 331 SUPERFAMILY SSF52518 8 330 1.46E-103 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold ABE28_014865 16d766292da90810f4a49f570a2cfe8e 331 Gene3D G3DSA:3.40.50.970 1 331 2.1E-120 T 11-10-2018 ABE28_021445 7c4769834c846a15fae93ff38a4acec0 207 SMART SM00479 6 183 2.3E-27 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_021445 7c4769834c846a15fae93ff38a4acec0 207 Pfam PF00929 Exonuclease 8 174 1.6E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III ABE28_021445 7c4769834c846a15fae93ff38a4acec0 207 Gene3D G3DSA:3.30.420.10 2 202 1.8E-39 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_021445 7c4769834c846a15fae93ff38a4acec0 207 SUPERFAMILY SSF53098 6 179 4.4E-30 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_018700 4ece45337157ab4e730c280c3b2afc06 176 Gene3D G3DSA:3.40.1580.20 1 174 6.7E-15 T 11-10-2018 IPR038228 Syd superfamily ABE28_018700 4ece45337157ab4e730c280c3b2afc06 176 Pfam PF07348 Syd protein (SUKH-2) 3 173 3.9E-27 T 11-10-2018 IPR009948 Syd GO:0009898 ABE28_014000 ba31a9697808ef49a8c3809c2fc7c0c1 432 Gene3D G3DSA:3.30.420.10 105 269 5.8E-6 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 ABE28_014000 ba31a9697808ef49a8c3809c2fc7c0c1 432 SUPERFAMILY SSF53098 104 283 6.84E-31 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily ABE28_014000 ba31a9697808ef49a8c3809c2fc7c0c1 432 Pfam PF13482 RNase_H superfamily 105 273 1.1E-40 T 11-10-2018 IPR038720 YprB, ribonuclease H-like domain ABE28_006085 89d0e6b7f340706e6e2449f67cad323f 60 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 4 57 7.0E-14 T 11-10-2018 IPR024558 ComZ ABE28_006085 89d0e6b7f340706e6e2449f67cad323f 60 Pfam PF10815 ComZ 4 58 3.8E-27 T 11-10-2018 IPR024558 ComZ ABE28_017380 ce1fd227bed71d9b9793017c763b92ac 268 PIRSF PIRSF012562 1 267 5.0E-129 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 ABE28_017380 ce1fd227bed71d9b9793017c763b92ac 268 Pfam PF07285 Protein of unknown function (DUF1444) 3 265 4.9E-127 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 ABE28_017380 ce1fd227bed71d9b9793017c763b92ac 268 Hamap MF_01548 UPF0354 protein . 3 267 45.904 T 11-10-2018 IPR010838 Protein of unknown unction DUF1444 ABE28_024135 965268eafb9715d79ff7b3cf83aa8d42 354 Gene3D G3DSA:3.20.20.30 2 354 5.1E-77 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_024135 965268eafb9715d79ff7b3cf83aa8d42 354 Pfam PF00296 Luciferase-like monooxygenase 26 306 8.5E-49 T 11-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 ABE28_024135 965268eafb9715d79ff7b3cf83aa8d42 354 SUPERFAMILY SSF51679 10 343 1.2E-75 T 11-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 ABE28_011750 2d5fc5a0cef746855b8bf6c1ebf62510 130 Pfam PF07070 SpoOM protein 3 128 1.5E-15 T 11-10-2018 IPR009776 Sporulation stage 0, protein M ABE28_003970 e5b69337286c7a96c4303f2510c52c89 83 Pfam PF02447 GntP family permease 2 83 6.4E-17 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_017135 f93c9d1d2d74ec18c8354cdbc38b33be 230 Pfam PF11167 Protein of unknown function (DUF2953) 131 177 5.4E-15 T 11-10-2018 IPR021338 Protein of unknown function DUF2953 ABE28_002440 6d99624ea8707021d8b3241757358125 368 Pfam PF01594 AI-2E family transporter 26 349 5.9E-86 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_022265 36415f7f2309ff9e48d5d4caaee0eeb0 172 Gene3D G3DSA:2.160.10.10 36 171 2.2E-28 T 11-10-2018 ABE28_022265 36415f7f2309ff9e48d5d4caaee0eeb0 172 SUPERFAMILY SSF51161 10 159 1.03E-32 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_022265 36415f7f2309ff9e48d5d4caaee0eeb0 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 3.2E-10 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_000770 84c2bd909dc0ad262da1575aa1c52f3d 141 Pfam PF10730 Protein of unknown function (DUF2521) 1 141 1.5E-48 T 11-10-2018 IPR019667 Uncharacterised protein family YbaK ABE28_006440 8beb8e13abce7e5651fb30deeb9ef0c7 435 Gene3D G3DSA:3.40.190.10 31 435 1.7E-62 T 11-10-2018 ABE28_006440 8beb8e13abce7e5651fb30deeb9ef0c7 435 SUPERFAMILY SSF53850 33 432 3.83E-62 T 11-10-2018 ABE28_006440 8beb8e13abce7e5651fb30deeb9ef0c7 435 Pfam PF13416 Bacterial extracellular solute-binding protein 54 362 3.7E-34 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_015275 069760a15568ff9e422106a0f4d466b4 255 Pfam PF06691 Protein of unknown function (DUF1189) 4 245 1.5E-68 T 11-10-2018 IPR009574 Protein of unknown function DUF1189 ABE28_024195 83f91d4c5fa780bab921ac5df3f6aacb 412 SUPERFAMILY SSF103473 1 389 1.1E-43 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_024195 83f91d4c5fa780bab921ac5df3f6aacb 412 Gene3D G3DSA:1.20.1250.20 4 388 3.3E-36 T 11-10-2018 ABE28_024195 83f91d4c5fa780bab921ac5df3f6aacb 412 Pfam PF07690 Major Facilitator Superfamily 37 348 1.5E-30 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_021655 969e70a7f2f9423c1cb4bdadfbbe0a80 145 Gene3D G3DSA:1.20.120.580 1 144 2.7E-53 T 11-10-2018 IPR037038 Bsu32300-like superfamily ABE28_021655 969e70a7f2f9423c1cb4bdadfbbe0a80 145 Pfam PF01934 Protein of unknown function DUF86 34 127 9.6E-16 T 11-10-2018 IPR008201 Protein of unknown function DUF86 ABE28_012365 28b3f072c85da8afc5922eae5aec1c63 124 Pfam PF11042 Protein of unknown function (DUF2750) 18 113 2.4E-28 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 ABE28_014985 8e765c6d677ecb07481cb8771aaed9c9 402 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 1 395 3.4E-146 T 11-10-2018 IPR014194 Sporulation stage III, protein AE ABE28_014985 8e765c6d677ecb07481cb8771aaed9c9 402 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 80 395 4.4E-110 T 11-10-2018 IPR014194 Sporulation stage III, protein AE ABE28_014565 93ac4f6a6f11737cd7baa2601b77302b 286 Pfam PF06207 Protein of unknown function (DUF1002) 32 249 5.7E-77 T 11-10-2018 IPR009343 Protein of unknown function DUF1002 ABE28_003830 8999c71e65a9bfc22786fcd7cade2d4c 172 Pfam PF10002 Predicted membrane protein (DUF2243) 27 155 1.3E-45 T 11-10-2018 IPR018719 Protein of unknown function DUF2243, membrane ABE28_010620 14b82a5a250093c757f7624b7e6b82da 67 Pfam PF13217 Protein of unknown function (DUF4025) 6 47 4.7E-17 T 11-10-2018 IPR025100 Protein of unknown function DUF4025 ABE28_009750 f28a5f6e9b5d6f02aa62ad6bcc551122 109 Gene3D G3DSA:1.20.58.280 2 108 2.7E-35 T 11-10-2018 ABE28_009750 f28a5f6e9b5d6f02aa62ad6bcc551122 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 11 103 7.2E-33 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_009750 f28a5f6e9b5d6f02aa62ad6bcc551122 109 PIRSF PIRSF000699 1 109 3.9E-35 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 ABE28_009750 f28a5f6e9b5d6f02aa62ad6bcc551122 109 SUPERFAMILY SSF46973 6 104 2.62E-33 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 ABE28_003455 bb13d6e7f487a6893171409b308c68f0 92 Pfam PF04531 Bacteriophage holin 4 92 6.0E-15 T 11-10-2018 IPR006485 Bacteriophage holin ABE28_003455 bb13d6e7f487a6893171409b308c68f0 92 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 4 91 1.1E-13 T 11-10-2018 IPR006485 Bacteriophage holin ABE28_013935 95e3622c7fdb822414bc7235032ba558 149 Gene3D G3DSA:3.40.1550.10 2 149 2.5E-30 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_013935 95e3622c7fdb822414bc7235032ba558 149 Pfam PF13690 Chemotaxis phosphatase CheX 43 121 1.0E-12 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain ABE28_013935 95e3622c7fdb822414bc7235032ba558 149 SUPERFAMILY SSF103039 18 121 3.14E-17 T 11-10-2018 IPR028976 CheC-like superfamily ABE28_007745 6a81acf7ab953ff99fa86218f968c039 62 Gene3D G3DSA:2.30.170.40 19 62 1.6E-18 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007745 6a81acf7ab953ff99fa86218f968c039 62 SUPERFAMILY SSF143800 1 60 1.96E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007745 6a81acf7ab953ff99fa86218f968c039 62 Pfam PF00830 Ribosomal L28 family 3 58 1.8E-20 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007745 6a81acf7ab953ff99fa86218f968c039 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 5.2E-23 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_007745 6a81acf7ab953ff99fa86218f968c039 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.874 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 ABE28_023645 ede94fed63dddbe8d243e817e922bb24 264 SUPERFAMILY SSF56281 3 236 1.31E-44 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_023645 ede94fed63dddbe8d243e817e922bb24 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 2.5E-23 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_023645 ede94fed63dddbe8d243e817e922bb24 264 SMART SM00849 13 191 2.5E-11 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_023645 ede94fed63dddbe8d243e817e922bb24 264 Gene3D G3DSA:3.60.15.10 8 249 1.1E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014810 a4c512133dc95fb1b7ae6704e86c2807 171 Gene3D G3DSA:2.40.440.10 15 168 1.1E-39 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_014810 a4c512133dc95fb1b7ae6704e86c2807 171 SUPERFAMILY SSF141523 28 153 3.53E-31 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like ABE28_014810 a4c512133dc95fb1b7ae6704e86c2807 171 Pfam PF03734 L,D-transpeptidase catalytic domain 30 153 5.8E-22 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 ABE28_000990 0cb3098b0a44fc95aa708807ceb53f08 243 Pfam PF13490 Putative zinc-finger 7 36 4.3E-7 T 11-10-2018 IPR027383 Putative zinc-finger ABE28_000990 0cb3098b0a44fc95aa708807ceb53f08 243 Pfam PF10099 Anti-sigma-K factor rskA 58 240 6.1E-21 T 11-10-2018 IPR018764 Anti-sigma K factor RskA GO:0005886|GO:0016021 ABE28_000990 0cb3098b0a44fc95aa708807ceb53f08 243 Gene3D G3DSA:1.10.10.1320 3 103 1.5E-13 T 11-10-2018 ABE28_023120 4149e1ca07b7bd1624467c2fe577e278 122 Pfam PF04241 Protein of unknown function (DUF423) 18 104 1.1E-33 T 11-10-2018 IPR006696 Protein of unknown function DUF423 ABE28_014610 e8c8f03c27683689b02b80fc68542d44 116 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 104 4.5E-36 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 ABE28_014610 e8c8f03c27683689b02b80fc68542d44 116 Pfam PF01740 STAS domain 5 109 8.8E-25 T 11-10-2018 IPR002645 STAS domain ABE28_014610 e8c8f03c27683689b02b80fc68542d44 116 SUPERFAMILY SSF52091 3 113 5.89E-29 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_014610 e8c8f03c27683689b02b80fc68542d44 116 Gene3D G3DSA:3.30.750.24 2 116 4.5E-32 T 11-10-2018 IPR036513 STAS domain superfamily ABE28_014610 e8c8f03c27683689b02b80fc68542d44 116 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 3.7E-45 T 11-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 ABE28_019265 cb0fab04de254910680f4f5bc6c1e173 422 Pfam PF03611 PTS system sugar-specific permease component 8 404 9.4E-147 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 ABE28_019555 bc80a83105011ef31de389bf2790d63c 105 SUPERFAMILY SSF54909 1 98 7.6E-15 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel ABE28_019555 bc80a83105011ef31de389bf2790d63c 105 Pfam PF03992 Antibiotic biosynthesis monooxygenase 8 72 3.1E-8 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain ABE28_019555 bc80a83105011ef31de389bf2790d63c 105 Gene3D G3DSA:3.30.70.100 1 105 6.0E-17 T 11-10-2018 ABE28_016835 315f86b519be5b0f4bb0ddaa39180217 162 PIRSF PIRSF030140 1 162 3.4E-54 T 11-10-2018 IPR016947 Uncharacterised phage-associated protein UCP030140 ABE28_016835 315f86b519be5b0f4bb0ddaa39180217 162 Gene3D G3DSA:1.10.4010.10 1 162 4.4E-12 T 11-10-2018 ABE28_016835 315f86b519be5b0f4bb0ddaa39180217 162 SUPERFAMILY SSF101386 2 162 9.16E-41 T 11-10-2018 ABE28_016835 315f86b519be5b0f4bb0ddaa39180217 162 Pfam PF08761 dUTPase 2 162 4.2E-49 T 11-10-2018 IPR014871 dUTPase/dCTP pyrophosphatase KEGG: 00240+3.6.1.12 ABE28_015225 de38e70ddbfeb99ea4975c0a36827641 147 Gene3D G3DSA:1.10.8.1150 80 147 1.2E-9 T 11-10-2018 ABE28_015225 de38e70ddbfeb99ea4975c0a36827641 147 Pfam PF02618 YceG-like family 84 146 1.8E-6 T 11-10-2018 IPR003770 Endolytic murein transglycosylase ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 PRINTS PR00990 Ribokinase signature 223 234 1.1E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 PRINTS PR00990 Ribokinase signature 184 199 1.1E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 PRINTS PR00990 Ribokinase signature 29 48 1.1E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 Gene3D G3DSA:3.40.1190.20 1 328 3.1E-98 T 11-10-2018 IPR029056 Ribokinase-like ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 Pfam PF00294 pfkB family carbohydrate kinase 1 312 3.6E-70 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_011640 49aa41e38e668a1f118d1247be1e0a42 329 SUPERFAMILY SSF53613 1 320 1.06E-79 T 11-10-2018 IPR029056 Ribokinase-like ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 19 486 1.3E-71 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 22 46 3.6E-11 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 142 166 3.6E-11 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 112 132 3.6E-11 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 404 423 3.6E-11 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 PRINTS PR01036 Tetracycline resistance protein TetB signature 207 225 3.6E-11 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 Pfam PF07690 Major Facilitator Superfamily 23 414 1.7E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 Gene3D G3DSA:1.20.1250.20 259 497 4.4E-21 T 11-10-2018 ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 SUPERFAMILY SSF103473 13 495 6.8E-73 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_007095 0f5c4ae9bc1962f490ec6e9efc008d67 497 Gene3D G3DSA:1.20.1720.10 19 226 4.4E-59 T 11-10-2018 ABE28_021215 21c05d53f488a3b5c24745cbe79d125f 288 Pfam PF14257 Domain of unknown function (DUF4349) 17 277 3.4E-72 T 11-10-2018 IPR025645 Domain of unknown function DUF4349 ABE28_020010 2c4642f028f855f6e3de05a288a767da 148 Pfam PF14106 Domain of unknown function (DUF4279) 13 135 7.9E-32 T 11-10-2018 IPR025459 Protein of unknown function DUF4279 ABE28_006755 6000b8af7f9790685f8ff2b078dd9573 299 SMART SM00382 26 204 9.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_006755 6000b8af7f9790685f8ff2b078dd9573 299 Pfam PF00005 ABC transporter 18 154 2.3E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_006755 6000b8af7f9790685f8ff2b078dd9573 299 Gene3D G3DSA:3.40.50.300 1 229 1.3E-46 T 11-10-2018 ABE28_006755 6000b8af7f9790685f8ff2b078dd9573 299 SUPERFAMILY SSF52540 2 221 1.17E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_016970 ce251a908f663208a57b2f658a28a2a6 375 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 359 3.5E-106 T 11-10-2018 IPR014227 Putative transport protein YtvI-like ABE28_016970 ce251a908f663208a57b2f658a28a2a6 375 Pfam PF01594 AI-2E family transporter 16 353 4.1E-63 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_014185 7c9ad6437cda900a5cf63348c59c2b9d 225 Pfam PF04298 Putative neutral zinc metallopeptidase 2 217 2.0E-93 T 11-10-2018 IPR007395 Putative neutral zinc metallopeptidase ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 Gene3D G3DSA:3.40.47.10 7 272 4.3E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 ProSitePatterns PS00737 Thiolases signature 2. 335 351 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 Pfam PF00108 Thiolase, N-terminal domain 6 259 3.8E-79 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 SUPERFAMILY SSF53901 4 266 8.01E-76 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 ProSitePatterns PS00099 Thiolases active site. 370 383 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 PIRSF PIRSF000429 1 390 6.5E-130 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 Pfam PF02803 Thiolase, C-terminal domain 267 388 5.4E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 387 4.2E-143 T 11-10-2018 IPR002155 Thiolase GO:0016747 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 Gene3D G3DSA:3.40.47.10 125 386 4.3E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_010090 964559ba038c28ac57a94585e8ddc908 390 SUPERFAMILY SSF53901 267 388 2.31E-42 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 ABE28_018805 2682f71b0294126f3b8df93bac942c8e 340 Gene3D G3DSA:3.40.50.1980 163 338 1.5E-37 T 11-10-2018 ABE28_018805 2682f71b0294126f3b8df93bac942c8e 340 Gene3D G3DSA:3.40.50.1980 46 162 1.3E-21 T 11-10-2018 ABE28_018805 2682f71b0294126f3b8df93bac942c8e 340 SUPERFAMILY SSF53807 59 339 1.49E-44 T 11-10-2018 ABE28_018805 2682f71b0294126f3b8df93bac942c8e 340 Pfam PF01497 Periplasmic binding protein 76 312 2.7E-26 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_018985 6e424a78d9ddd89cfb1ce41d62f025a2 163 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 14 136 2.5E-52 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_018985 6e424a78d9ddd89cfb1ce41d62f025a2 163 SUPERFAMILY SSF51261 4 156 2.09E-56 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_018985 6e424a78d9ddd89cfb1ce41d62f025a2 163 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 15 135 3.1E-47 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_018985 6e424a78d9ddd89cfb1ce41d62f025a2 163 Gene3D G3DSA:2.70.70.10 4 162 6.4E-59 T 11-10-2018 IPR011055 Duplicated hybrid motif ABE28_018985 6e424a78d9ddd89cfb1ce41d62f025a2 163 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 77 89 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 Pfam PF02040 Arsenical pump membrane protein 6 428 6.6E-203 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 430 1.3E-216 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_004955 0110a2eaccfd370aaeec59f1cae69720 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 1.4E-107 T 11-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 ABE28_020690 0a2a4d53bb03f3ba08cd7006c53a2c50 453 PIRSF PIRSF006603 1 450 7.0E-62 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_020690 0a2a4d53bb03f3ba08cd7006c53a2c50 453 TIGRFAM TIGR00797 matE: MATE efflux family protein 27 418 1.0E-44 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_020690 0a2a4d53bb03f3ba08cd7006c53a2c50 453 Pfam PF01554 MatE 27 188 5.7E-26 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_020690 0a2a4d53bb03f3ba08cd7006c53a2c50 453 Pfam PF01554 MatE 247 399 1.5E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 ABE28_011690 5f1f3678c815dc694c927f440cd919b8 366 Gene3D G3DSA:3.40.190.10 57 326 2.9E-64 T 11-10-2018 ABE28_011690 5f1f3678c815dc694c927f440cd919b8 366 Gene3D G3DSA:3.40.190.10 146 353 2.9E-64 T 11-10-2018 ABE28_011690 5f1f3678c815dc694c927f440cd919b8 366 SUPERFAMILY SSF53850 40 357 5.44E-58 T 11-10-2018 ABE28_011690 5f1f3678c815dc694c927f440cd919b8 366 Pfam PF13416 Bacterial extracellular solute-binding protein 61 316 4.1E-31 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_024065 7237e7c8b2a63d67a29c91702ea57da4 184 Gene3D G3DSA:3.40.630.30 8 175 5.3E-44 T 11-10-2018 ABE28_024065 7237e7c8b2a63d67a29c91702ea57da4 184 SUPERFAMILY SSF55729 8 179 9.47E-43 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_024065 7237e7c8b2a63d67a29c91702ea57da4 184 Pfam PF13302 Acetyltransferase (GNAT) domain 17 155 9.6E-26 T 11-10-2018 IPR000182 GNAT domain ABE28_003200 ca32cc73cebf5a2fe9b34f9713b756bd 382 SUPERFAMILY SSF56563 94 359 5.23E-13 T 11-10-2018 ABE28_003200 ca32cc73cebf5a2fe9b34f9713b756bd 382 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 58 245 6.8E-11 T 11-10-2018 IPR024455 Phage capsid ABE28_003200 ca32cc73cebf5a2fe9b34f9713b756bd 382 Pfam PF05065 Phage capsid family 95 316 6.2E-11 T 11-10-2018 IPR024455 Phage capsid ABE28_017145 3a4f2d5569fa38c3a87cef90c98e5ccb 333 Gene3D G3DSA:3.40.1750.20 170 236 1.5E-85 T 11-10-2018 ABE28_017145 3a4f2d5569fa38c3a87cef90c98e5ccb 333 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 61 278 1.2E-82 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 ABE28_017145 3a4f2d5569fa38c3a87cef90c98e5ccb 333 Pfam PF01343 Peptidase family S49 130 278 3.3E-56 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 ABE28_017145 3a4f2d5569fa38c3a87cef90c98e5ccb 333 Gene3D G3DSA:3.90.226.10 62 275 1.5E-85 T 11-10-2018 ABE28_017145 3a4f2d5569fa38c3a87cef90c98e5ccb 333 SUPERFAMILY SSF52096 61 266 6.78E-43 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily ABE28_009375 f6cd50ea0dfd59b6e9f1ba5b0aa1a374 153 Pfam PF17428 Family of unknown function (DUF5412) 22 125 2.6E-7 T 11-10-2018 IPR035406 Protein of unknown function DUF5412 ABE28_009895 a503f95ef05ab540a1140deb0595ea09 310 Gene3D G3DSA:3.90.1200.10 108 301 1.1E-22 T 11-10-2018 ABE28_009895 a503f95ef05ab540a1140deb0595ea09 310 Pfam PF01636 Phosphotransferase enzyme family 44 239 2.8E-23 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_009895 a503f95ef05ab540a1140deb0595ea09 310 SUPERFAMILY SSF56112 11 281 8.02E-33 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_023450 0a43ad41d1d1cacf237552bcdf5b6060 381 Pfam PF02687 FtsX-like permease family 287 374 2.8E-16 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_023450 0a43ad41d1d1cacf237552bcdf5b6060 381 Pfam PF12704 MacB-like periplasmic core domain 14 220 1.3E-35 T 11-10-2018 IPR025857 MacB-like periplasmic core domain ABE28_002645 3940a1ec8b06ebda3cf917adac36c908 65 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 39 63 1.2E-9 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 ABE28_002645 3940a1ec8b06ebda3cf917adac36c908 65 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 26 64 4.0E-12 T 11-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 ABE28_015560 7cf08d3bd1dc29581d5bb253314e2182 44 Pfam PF14141 YqzM-like protein 2 43 1.5E-19 T 11-10-2018 IPR025416 YqzM-like protein ABE28_007440 ab394956d10ddfdfd15111435d68e68d 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 19.52 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007440 ab394956d10ddfdfd15111435d68e68d 57 SUPERFAMILY SSF57829 1 55 1.34E-21 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 ABE28_007440 ab394956d10ddfdfd15111435d68e68d 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 3.6E-27 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_007440 ab394956d10ddfdfd15111435d68e68d 57 Pfam PF01783 Ribosomal L32p protein family 2 56 2.9E-26 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 ABE28_005845 3a5348a519177eb09d37d16779eb14ca 186 Pfam PF06338 ComK protein 9 157 1.3E-56 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 ABE28_005845 3a5348a519177eb09d37d16779eb14ca 186 PIRSF PIRSF011560 5 184 1.1E-59 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 ABE28_017395 86b91dd2b0323b7fef5c8a88231e938a 149 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 6.0E-66 T 11-10-2018 IPR019884 YtoQ family protein ABE28_017395 86b91dd2b0323b7fef5c8a88231e938a 149 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 1.0E-62 T 11-10-2018 IPR019884 YtoQ family protein ABE28_019860 66d9d44aa0075b53981f52a7c72acd22 490 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 478 3.0E-136 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_019860 66d9d44aa0075b53981f52a7c72acd22 490 PIRSF PIRSF005690 5 490 4.6E-130 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_010325 62f8fe9908f8ef019774eaabef6ade52 79 Pfam PF13396 Phospholipase_D-nuclease N-terminal 31 73 1.3E-10 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 Pfam PF08439 Oligopeptidase F 112 178 1.3E-10 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 Pfam PF01432 Peptidase family M3 331 575 5.0E-20 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 Gene3D G3DSA:1.10.1370.20 219 594 3.4E-119 T 11-10-2018 ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 6 588 5.1E-193 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 SUPERFAMILY SSF55486 50 589 4.67E-92 T 11-10-2018 ABE28_015640 deedb488daa16ab4a33bf6a9d11d037d 596 Gene3D G3DSA:1.20.140.70 21 173 1.2E-6 T 11-10-2018 ABE28_004180 09ba939d2ca073e12d4482d32f2c4bd5 436 TIGRFAM TIGR00784 citMHS: citrate transporter 1 436 2.8E-198 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 ABE28_004180 09ba939d2ca073e12d4482d32f2c4bd5 436 Pfam PF03600 Citrate transporter 13 383 2.3E-46 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABE28_010490 170222a6022630b41416b3de2b94da08 159 Pfam PF00583 Acetyltransferase (GNAT) family 21 137 1.6E-11 T 11-10-2018 IPR000182 GNAT domain ABE28_010490 170222a6022630b41416b3de2b94da08 159 SUPERFAMILY SSF55729 6 146 5.59E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_010490 170222a6022630b41416b3de2b94da08 159 Gene3D G3DSA:3.40.630.30 4 157 2.6E-20 T 11-10-2018 ABE28_003100 a63b8ce372ee36e1042744f5835df694 505 Pfam PF13514 AAA domain 5 125 1.3E-4 T 11-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain ABE28_003100 a63b8ce372ee36e1042744f5835df694 505 SUPERFAMILY SSF52540 5 271 3.4E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_003100 a63b8ce372ee36e1042744f5835df694 505 Gene3D G3DSA:3.40.50.300 3 293 7.0E-22 T 11-10-2018 ABE28_014120 ae03cb5ae87e1a2a96b97825d4860530 56 PIRSF PIRSF036698 1 56 2.0E-35 T 11-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA ABE28_014120 ae03cb5ae87e1a2a96b97825d4860530 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 1.1E-24 T 11-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA ABE28_005705 5001cffdeb52b14bd9e0cd4d1f435e92 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 26 8.2E-12 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_005705 5001cffdeb52b14bd9e0cd4d1f435e92 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 27 1.3E-13 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_009265 e88ae24514bdeedea05d89612021f261 72 Pfam PF04688 SPP1 phage holin 9 68 1.3E-11 T 11-10-2018 IPR006479 Holin ABE28_009530 51d9eb083215248e60008200cfef96b7 153 Pfam PF11181 Heat induced stress protein YflT 6 138 4.5E-16 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_008810 f28c829b523bb51e4b91af05284500b4 230 Gene3D G3DSA:3.90.320.10 1 230 5.7E-74 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal ABE28_008810 f28c829b523bb51e4b91af05284500b4 230 Pfam PF12684 PDDEXK-like domain of unknown function (DUF3799) 1 215 8.0E-71 T 11-10-2018 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain ABE28_014740 e067a243117ba24316825a548c37ef32 143 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 126 1.2E-13 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain ABE28_014740 e067a243117ba24316825a548c37ef32 143 Gene3D G3DSA:3.10.180.10 1 143 7.2E-47 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_014740 e067a243117ba24316825a548c37ef32 143 SUPERFAMILY SSF54593 2 136 1.93E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase ABE28_017750 5dca069210562e5e5a2ce202f42f4373 120 SUPERFAMILY SSF46785 3 108 4.35E-33 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_017750 5dca069210562e5e5a2ce202f42f4373 120 Pfam PF01638 HxlR-like helix-turn-helix 16 104 2.7E-39 T 11-10-2018 IPR002577 Helix-turn-helix, HxlR type ABE28_017750 5dca069210562e5e5a2ce202f42f4373 120 Gene3D G3DSA:1.10.10.10 1 115 4.1E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_007065 3c6f87718f05ece0cfcdffd2588d8565 77 Gene3D G3DSA:3.40.30.10 1 77 8.9E-23 T 11-10-2018 ABE28_007065 3c6f87718f05ece0cfcdffd2588d8565 77 Pfam PF00462 Glutaredoxin 4 63 3.5E-13 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 ABE28_007065 3c6f87718f05ece0cfcdffd2588d8565 77 SUPERFAMILY SSF52833 2 68 1.42E-17 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_003900 c496c95cc919ea315fd0f24f1d90c459 470 Gene3D G3DSA:1.20.1250.20 245 457 4.8E-15 T 11-10-2018 ABE28_003900 c496c95cc919ea315fd0f24f1d90c459 470 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 27 465 1.0E-111 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 ABE28_003900 c496c95cc919ea315fd0f24f1d90c459 470 Gene3D G3DSA:1.20.1250.20 29 223 5.8E-11 T 11-10-2018 ABE28_003900 c496c95cc919ea315fd0f24f1d90c459 470 SUPERFAMILY SSF103473 30 457 5.62E-37 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_003900 c496c95cc919ea315fd0f24f1d90c459 470 Pfam PF13347 MFS/sugar transport protein 29 452 2.7E-96 T 11-10-2018 ABE28_018415 ebe0f6cf23019a05ed5306911e362692 208 Pfam PF01810 LysE type translocator 12 201 7.9E-39 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABE28_003000 b62ee14bad379d26771349950d8a7376 180 SUPERFAMILY SSF55729 1 158 4.96E-21 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003000 b62ee14bad379d26771349950d8a7376 180 Gene3D G3DSA:3.40.630.30 1 161 3.9E-22 T 11-10-2018 ABE28_003000 b62ee14bad379d26771349950d8a7376 180 Pfam PF00583 Acetyltransferase (GNAT) family 49 140 3.6E-10 T 11-10-2018 IPR000182 GNAT domain ABE28_016850 5a582bbdd0d90e6d2441a21561f1af01 90 Pfam PF06961 Protein of unknown function (DUF1294) 15 69 3.7E-24 T 11-10-2018 IPR010718 Protein of unknown function DUF1294 ABE28_015000 251305626d728a88fd0d36dcab74c919 171 PIRSF PIRSF021435 1 171 3.4E-64 T 11-10-2018 IPR014198 Stage III sporulation protein AB ABE28_015000 251305626d728a88fd0d36dcab74c919 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 6.3E-64 T 11-10-2018 IPR014198 Stage III sporulation protein AB ABE28_015000 251305626d728a88fd0d36dcab74c919 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 4.3E-55 T 11-10-2018 IPR014198 Stage III sporulation protein AB ABE28_016465 d983666b16e27048ac385a1f7f19dd3d 278 Pfam PF01578 Cytochrome C assembly protein 70 271 1.1E-27 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00691 Adhesin B signature 300 318 2.4E-10 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00691 Adhesin B signature 79 98 2.4E-10 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00691 Adhesin B signature 60 78 2.4E-10 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00691 Adhesin B signature 35 56 2.4E-10 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00691 Adhesin B signature 207 224 2.4E-10 T 11-10-2018 IPR006129 Adhesin B GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 Pfam PF01297 Zinc-uptake complex component A periplasmic 38 320 3.8E-66 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 SUPERFAMILY SSF53807 34 321 3.53E-76 T 11-10-2018 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 Gene3D G3DSA:3.40.50.1980 24 208 3.4E-50 T 11-10-2018 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00690 Adhesin family signature 207 228 2.6E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00690 Adhesin family signature 66 79 2.6E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00690 Adhesin family signature 260 278 2.6E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 PRINTS PR00690 Adhesin family signature 79 96 2.6E-9 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 ABE28_020770 decdaa2c92f8624222a50c5930c4fbdd 322 Gene3D G3DSA:3.40.50.1980 210 322 1.4E-38 T 11-10-2018 ABE28_023430 4d8eace42dbf53c217cf292bf83bbe98 394 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 4.9E-59 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 ABE28_023430 4d8eace42dbf53c217cf292bf83bbe98 394 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 4.2E-18 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 ABE28_013550 601fbf8f72f888d3fb9951e20d7f8de6 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_013550 601fbf8f72f888d3fb9951e20d7f8de6 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 5.4E-23 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_013550 601fbf8f72f888d3fb9951e20d7f8de6 67 Gene3D G3DSA:1.10.8.910 8 67 2.9E-31 T 11-10-2018 IPR038300 SASP, alpha/beta-type superfamily ABE28_013550 601fbf8f72f888d3fb9951e20d7f8de6 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_007285 cca7e6ee5a208a8a14212330b9d9622b 170 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 7 169 2.0E-47 T 11-10-2018 IPR020229 Uncharacterised protein YlaL ABE28_010605 07de3b4dc4313da4d860696c34798dc9 223 Gene3D G3DSA:3.90.1680.10 3 223 2.8E-71 T 11-10-2018 IPR036590 SOS response associated peptidase-like ABE28_010605 07de3b4dc4313da4d860696c34798dc9 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 210 1.1E-67 T 11-10-2018 IPR003738 SOS response associated peptidase (SRAP) ABE28_010605 07de3b4dc4313da4d860696c34798dc9 223 SUPERFAMILY SSF143081 2 221 7.98E-72 T 11-10-2018 IPR036590 SOS response associated peptidase-like ABE28_023240 e9e9960dc9a80106ac3a438643885794 263 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 263 39.836 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABE28_023240 e9e9960dc9a80106ac3a438643885794 263 Pfam PF02654 Cobalamin-5-phosphate synthase 11 251 4.9E-53 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABE28_023240 e9e9960dc9a80106ac3a438643885794 263 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 11 250 1.9E-42 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 ABE28_005755 eb4ef19aca42555bb288480c24c99b97 247 SMART SM00382 28 213 5.9E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain ABE28_005755 eb4ef19aca42555bb288480c24c99b97 247 Gene3D G3DSA:3.40.50.300 1 245 5.4E-64 T 11-10-2018 ABE28_005755 eb4ef19aca42555bb288480c24c99b97 247 Pfam PF00005 ABC transporter 19 162 2.9E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 ABE28_005755 eb4ef19aca42555bb288480c24c99b97 247 SUPERFAMILY SSF52540 3 228 2.34E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase ABE28_004905 b71d1d3fee299d4ca8e1f71dd11cc3d2 397 Pfam PF07690 Major Facilitator Superfamily 18 238 3.0E-28 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_004905 b71d1d3fee299d4ca8e1f71dd11cc3d2 397 Gene3D G3DSA:1.20.1250.20 10 383 1.7E-48 T 11-10-2018 ABE28_004905 b71d1d3fee299d4ca8e1f71dd11cc3d2 397 SUPERFAMILY SSF103473 10 388 3.66E-55 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_011420 dd007fdbeb3e69ba7a92dcbde7883337 183 SUPERFAMILY SSF159234 27 134 6.41E-21 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_011420 dd007fdbeb3e69ba7a92dcbde7883337 183 Gene3D G3DSA:2.40.380.10 31 171 4.4E-6 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_011420 dd007fdbeb3e69ba7a92dcbde7883337 183 Pfam PF04167 Protein of unknown function (DUF402) 68 133 4.1E-12 T 11-10-2018 IPR007295 Domain of unknown function DUF402 ABE28_010460 d40f84e83e109b6cf3340ffdae688d07 192 Pfam PF15600 Immunity protein 64 1 189 3.3E-40 T 11-10-2018 IPR028951 Immunity protein 64 ABE28_004825 ec5fdf9ed57a61ddfea735a0d6e1e42c 85 Pfam PF04226 Transglycosylase associated protein 34 78 8.8E-11 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 ABE28_016400 bb775ee20cfd5697be91e104a67312c2 323 SUPERFAMILY SSF110997 148 210 5.49E-5 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 ABE28_005590 21ee7202a2a79d4fd861bb69aff5cfc9 356 Gene3D G3DSA:3.30.470.20 215 345 1.1E-6 T 11-10-2018 ABE28_005590 21ee7202a2a79d4fd861bb69aff5cfc9 356 Pfam PF14398 YheC/D like ATP-grasp 96 347 1.2E-68 T 11-10-2018 IPR026838 Endospore coat-associated protein YheC/D ABE28_005590 21ee7202a2a79d4fd861bb69aff5cfc9 356 SUPERFAMILY SSF56059 112 328 4.86E-16 T 11-10-2018 ABE28_023600 5b83413da42b8119b66dfff984b08ad0 569 Pfam PF08757 CotH kinase protein 94 459 3.8E-61 T 11-10-2018 IPR014867 Spore coat protein CotH ABE28_011980 6289eff3d5945d78689e6fed6e0c9ed9 173 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 109 161 7.9E-7 T 11-10-2018 IPR019264 Domain of unknown function DUF2179 ABE28_011980 6289eff3d5945d78689e6fed6e0c9ed9 173 Hamap MF_01515 UPF0316 protein . 1 169 27.823 T 11-10-2018 IPR022930 Protein of unknown function UPF0316 ABE28_015110 1ae5a90401ea762e8d683a007532bb60 112 ProDom PD073895 COMPETENCE COMGE LATE MACHINERY MEMBRANE OPERON DNA THE METHYLATION PART 2 82 5.0E-4 T 11-10-2018 IPR020488 Competence operon G, ComGE ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 Gene3D G3DSA:3.10.310.10 7 281 1.8E-66 T 11-10-2018 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 SUPERFAMILY SSF54506 150 288 1.26E-26 T 11-10-2018 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 6 266 5.8E-58 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 Gene3D G3DSA:3.10.310.10 125 280 1.8E-66 T 11-10-2018 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 SUPERFAMILY SSF54506 7 136 1.2E-29 T 11-10-2018 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 290 30.185 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 Pfam PF01678 Diaminopimelate epimerase 6 111 2.9E-25 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABE28_013015 fe9532095c875c54355e18fae36df7cb 328 Pfam PF01678 Diaminopimelate epimerase 163 272 4.2E-12 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 ABE28_003425 73ede9c2aff6b775e9a79e49048b75d0 164 Gene3D G3DSA:1.10.3330.10 2 164 5.7E-55 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_003425 73ede9c2aff6b775e9a79e49048b75d0 164 Pfam PF09349 OHCU decarboxylase 9 159 1.3E-41 T 11-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_003425 73ede9c2aff6b775e9a79e49048b75d0 164 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 10 162 2.3E-55 T 11-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_003425 73ede9c2aff6b775e9a79e49048b75d0 164 SUPERFAMILY SSF158694 3 162 3.79E-45 T 11-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 ABE28_005675 b3b3af331a4b856688a9d51e6dc38e2a 81 Gene3D G3DSA:3.40.50.360 6 81 2.0E-5 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_016985 b995ccb90bd73f332d87e071b64b0495 130 Pfam PF04186 FxsA cytoplasmic membrane protein 6 111 5.6E-36 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 ABE28_014490 484d1919c365c09e2a58eed2c84dbf22 549 Pfam PF05140 ResB-like family 64 430 2.3E-74 T 11-10-2018 IPR007816 ResB-like domain ABE28_014490 484d1919c365c09e2a58eed2c84dbf22 549 Pfam PF05140 ResB-like family 444 519 2.1E-16 T 11-10-2018 IPR007816 ResB-like domain ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 SUPERFAMILY SSF47090 33 98 8.01E-20 T 11-10-2018 IPR036365 PGBD-like superfamily ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 Pfam PF01471 Putative peptidoglycan binding domain 43 98 6.7E-17 T 11-10-2018 IPR002477 Peptidoglycan binding-like ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 Gene3D G3DSA:1.10.101.10 27 108 7.4E-21 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 Gene3D G3DSA:1.10.10.2520 168 247 6.1E-32 T 11-10-2018 ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 Pfam PF07486 Cell Wall Hydrolase 184 282 1.3E-27 T 11-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 Gene3D G3DSA:2.40.10.420 248 283 2.0E-21 T 11-10-2018 ABE28_014385 43b47f5003c18ae2a79e7a17f0c150ed 283 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 31 283 1.4E-95 T 11-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 ABE28_004135 33da9a32ec55600ba9f8398310aa3cce 186 Gene3D G3DSA:3.40.50.360 1 176 4.0E-41 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_004135 33da9a32ec55600ba9f8398310aa3cce 186 Pfam PF03358 NADPH-dependent FMN reductase 1 145 4.7E-31 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_004135 33da9a32ec55600ba9f8398310aa3cce 186 SUPERFAMILY SSF52218 1 174 3.57E-34 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_000135 298ebccdff17de6199f2426e86a7c599 276 Pfam PF04468 PSP1 C-terminal conserved region 61 146 1.9E-29 T 11-10-2018 IPR007557 PSP1, C-terminal ABE28_015175 841e8a86ed6cfc2fdc1a16218e1d8267 390 SUPERFAMILY SSF69322 81 203 5.49E-8 T 11-10-2018 ABE28_004800 2f66b5e64bbc1a92bd0cc6059d853a0d 419 SUPERFAMILY SSF55781 86 156 3.36E-5 T 11-10-2018 ABE28_004800 2f66b5e64bbc1a92bd0cc6059d853a0d 419 Gene3D G3DSA:1.10.10.2840 283 413 1.9E-16 T 11-10-2018 ABE28_004800 2f66b5e64bbc1a92bd0cc6059d853a0d 419 Pfam PF13556 PucR C-terminal helix-turn-helix domain 350 407 3.2E-17 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain ABE28_015030 0e4ea59515f192df4e653c240fb4cf6e 317 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 294 1.0E-91 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 ABE28_015030 0e4ea59515f192df4e653c240fb4cf6e 317 Pfam PF07136 Protein of unknown function (DUF1385) 56 301 5.0E-79 T 11-10-2018 IPR010787 Protein of unknown function DUF1385 ABE28_010900 5f5dfe0219b1abc1731940dc720a1ac0 441 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 8 440 7.1E-137 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_010900 5f5dfe0219b1abc1731940dc720a1ac0 441 PIRSF PIRSF002746 1 441 4.6E-144 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_010900 5f5dfe0219b1abc1731940dc720a1ac0 441 Pfam PF02447 GntP family permease 6 439 9.8E-146 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_006975 bfc9095f85e3e6c79ef6c2b1a88d660a 261 Pfam PF03649 Uncharacterised protein family (UPF0014) 11 253 2.5E-81 T 11-10-2018 IPR005226 UPF0014 family ABE28_006975 bfc9095f85e3e6c79ef6c2b1a88d660a 261 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 12 259 3.9E-58 T 11-10-2018 IPR005226 UPF0014 family ABE28_007140 76d718f69c4a6798f0b9ac181e14de5e 224 SUPERFAMILY SSF140423 24 213 1.7E-51 T 11-10-2018 IPR036785 YkyA-like superfamily ABE28_007140 76d718f69c4a6798f0b9ac181e14de5e 224 Pfam PF10368 Putative cell-wall binding lipoprotein 17 215 7.9E-65 T 11-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like ABE28_007140 76d718f69c4a6798f0b9ac181e14de5e 224 Gene3D G3DSA:1.20.120.570 18 211 1.7E-54 T 11-10-2018 IPR036785 YkyA-like superfamily ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 Pfam PF00501 AMP-binding enzyme 29 431 1.4E-106 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 Gene3D G3DSA:3.40.50.12780 13 428 2.0E-121 T 11-10-2018 ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 SUPERFAMILY SSF56801 13 525 1.83E-155 T 11-10-2018 ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 Gene3D G3DSA:3.30.300.310 429 529 1.7E-33 T 11-10-2018 ABE28_010775 6383e39a16d40f12ddcc271b9b00e589 540 Pfam PF13193 AMP-binding enzyme C-terminal domain 441 516 1.1E-21 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain ABE28_002925 49c2441ad40517fed02618965af0dda4 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 5.9E-21 T 11-10-2018 ABE28_002925 49c2441ad40517fed02618965af0dda4 77 Pfam PF02597 ThiS family 4 77 2.5E-14 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 ABE28_002925 49c2441ad40517fed02618965af0dda4 77 Gene3D G3DSA:3.10.20.30 1 77 7.2E-20 T 11-10-2018 IPR012675 Beta-grasp domain superfamily ABE28_002925 49c2441ad40517fed02618965af0dda4 77 SUPERFAMILY SSF54285 1 77 5.42E-17 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp ABE28_010495 223554217b14656d5d0b83a9aa35b348 180 SUPERFAMILY SSF159234 1 163 9.29E-33 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_010495 223554217b14656d5d0b83a9aa35b348 180 Gene3D G3DSA:2.40.380.10 41 164 5.3E-11 T 11-10-2018 IPR035930 FomD-like superfamily ABE28_010495 223554217b14656d5d0b83a9aa35b348 180 Pfam PF04167 Protein of unknown function (DUF402) 62 129 1.7E-17 T 11-10-2018 IPR007295 Domain of unknown function DUF402 ABE28_015260 0660599401bfca955d34f26c6007b99d 406 Pfam PF07690 Major Facilitator Superfamily 22 335 1.8E-18 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_015260 0660599401bfca955d34f26c6007b99d 406 Gene3D G3DSA:1.20.1250.20 13 397 1.7E-22 T 11-10-2018 ABE28_015260 0660599401bfca955d34f26c6007b99d 406 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_015260 0660599401bfca955d34f26c6007b99d 406 SUPERFAMILY SSF103473 14 399 2.75E-29 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_019015 b6dc4b38096391559953f7adc19ca6ba 262 Gene3D G3DSA:3.40.710.10 28 262 7.2E-94 T 11-10-2018 ABE28_019015 b6dc4b38096391559953f7adc19ca6ba 262 SUPERFAMILY SSF56601 37 250 3.82E-33 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like ABE28_019015 b6dc4b38096391559953f7adc19ca6ba 262 ProSitePatterns PS00337 Beta-lactamase class-D active site. 70 80 - T 11-10-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 ABE28_019015 b6dc4b38096391559953f7adc19ca6ba 262 Pfam PF00905 Penicillin binding protein transpeptidase domain 52 250 2.2E-34 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 ABE28_015405 eb1e6b73170f683a543a1c5ccfd63dd1 47 Pfam PF14006 YqzL-like protein 3 45 4.3E-16 T 11-10-2018 IPR025617 YqzL-like protein ABE28_001635 f7efd57fedd1f8794fb3efd18a97fd75 448 PIRSF PIRSF002746 1 448 6.4E-162 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_001635 f7efd57fedd1f8794fb3efd18a97fd75 448 Pfam PF02447 GntP family permease 1 445 9.2E-164 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_001635 f7efd57fedd1f8794fb3efd18a97fd75 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 448 4.6E-177 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_011680 ef33446d5bb903fc8ded7fff9259a1f5 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 307 2.5E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_011680 ef33446d5bb903fc8ded7fff9259a1f5 314 SUPERFAMILY SSF161098 35 308 1.59E-57 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011680 ef33446d5bb903fc8ded7fff9259a1f5 314 Gene3D G3DSA:1.10.3720.10 36 311 9.3E-57 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_014850 0431e49a92362ce36943eaf21f8547c3 626 Gene3D G3DSA:3.20.20.240 36 469 6.1E-135 T 11-10-2018 ABE28_014850 0431e49a92362ce36943eaf21f8547c3 626 Pfam PF01642 Methylmalonyl-CoA mutase 39 529 2.4E-114 T 11-10-2018 IPR006099 Methylmalonyl-CoA mutase, alpha/beta chain, catalytic GO:0016866|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_014850 0431e49a92362ce36943eaf21f8547c3 626 Gene3D G3DSA:3.40.50.280 489 626 2.4E-24 T 11-10-2018 ABE28_014850 0431e49a92362ce36943eaf21f8547c3 626 SUPERFAMILY SSF52242 471 625 1.49E-25 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 ABE28_014850 0431e49a92362ce36943eaf21f8547c3 626 SUPERFAMILY SSF51703 10 520 5.76E-115 T 11-10-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 ABE28_023095 319e6013609d470c6dd30c9fa7afc77d 248 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 78 1.7E-43 T 11-10-2018 IPR014243 Transcription factor, RsfA ABE28_023095 319e6013609d470c6dd30c9fa7afc77d 248 Pfam PF13921 Myb-like DNA-binding domain 8 60 5.2E-5 T 11-10-2018 ABE28_023095 319e6013609d470c6dd30c9fa7afc77d 248 SUPERFAMILY SSF46689 3 62 6.64E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_008020 5c46078d506aaf9c889098ed267f45af 219 Pfam PF04347 Flagellar biosynthesis protein, FliO 91 195 1.7E-13 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 ABE28_019915 5f868ab2a56bca379f4281a0215649b8 343 Pfam PF00487 Fatty acid desaturase 51 291 3.1E-34 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 ABE28_022765 9e5037fb82fcff73401499959d3b5a97 80 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 13 77 2.4E-23 T 11-10-2018 IPR009526 Protein of unknown function DUF1146 ABE28_022765 9e5037fb82fcff73401499959d3b5a97 80 Pfam PF06612 Protein of unknown function (DUF1146) 17 64 1.3E-20 T 11-10-2018 IPR009526 Protein of unknown function DUF1146 ABE28_011855 4491b31bc8d163a75fe44731b3698ac3 323 TIGRFAM TIGR00629 uvde: UV damage endonuclease UvdE 4 307 8.7E-66 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 ABE28_011855 4491b31bc8d163a75fe44731b3698ac3 323 Pfam PF03851 UV-endonuclease UvdE 6 278 3.2E-84 T 11-10-2018 IPR004601 UV-endonuclease UvdE GO:0004519|GO:0006289|GO:0009411 ABE28_011855 4491b31bc8d163a75fe44731b3698ac3 323 Gene3D G3DSA:3.20.20.150 3 313 3.0E-93 T 11-10-2018 ABE28_011855 4491b31bc8d163a75fe44731b3698ac3 323 SUPERFAMILY SSF51658 83 293 1.24E-10 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_023750 a128b998bf4c9add81ea8a70d95791de 211 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 44 185 2.1E-65 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 ABE28_023750 a128b998bf4c9add81ea8a70d95791de 211 Pfam PF06866 Protein of unknown function (DUF1256) 19 183 1.8E-64 T 11-10-2018 IPR009665 Protein of unknown function DUF1256 ABE28_023750 a128b998bf4c9add81ea8a70d95791de 211 SUPERFAMILY SSF53163 16 200 3.4E-54 T 11-10-2018 IPR023430 Peptidase HybD-like domain superfamily ABE28_021360 a45f90e8324962c297e065f013ddcb84 391 SUPERFAMILY SSF53383 5 387 3.99E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase ABE28_021360 a45f90e8324962c297e065f013ddcb84 391 Gene3D G3DSA:3.40.640.10 71 294 3.1E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 ABE28_021360 a45f90e8324962c297e065f013ddcb84 391 Pfam PF00155 Aminotransferase class I and II 70 386 5.0E-40 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 ABE28_021360 a45f90e8324962c297e065f013ddcb84 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 6 390 3.6E-150 T 11-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 ABE28_021360 a45f90e8324962c297e065f013ddcb84 391 Gene3D G3DSA:3.90.1150.10 14 386 3.1E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 ABE28_002080 ddd7a2c6321dbffad0b26240699aba62 113 SUPERFAMILY SSF90257 31 99 2.48E-5 T 11-10-2018 ABE28_002080 ddd7a2c6321dbffad0b26240699aba62 113 Gene3D G3DSA:1.20.920.20 10 105 8.8E-6 T 11-10-2018 ABE28_011365 e459c7c4e7e94c2838e03498b67cecef 125 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 5 115 4.2E-38 T 11-10-2018 IPR018745 Domain of unknown function DUF2294 ABE28_018705 cd3d47fa90108d3207370bbbba74bef6 616 Pfam PF04740 LXG domain of WXG superfamily 17 210 1.2E-39 T 11-10-2018 IPR006829 LXG domain ABE28_018705 cd3d47fa90108d3207370bbbba74bef6 616 Pfam PF15637 HNH/Endo VII superfamily nuclease toxin with a HHH motif 491 586 1.6E-15 T 11-10-2018 IPR028915 Tox-HNH-HHH domain ABE28_014465 43796c23b714e2881e27c97b40223e7c 406 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 240 403 2.0E-19 T 11-10-2018 ABE28_003175 63b6154da75a503cfcbb4caf38e5e005 109 SMART SM00507 21 89 2.1E-4 T 11-10-2018 IPR003615 HNH nuclease ABE28_003175 63b6154da75a503cfcbb4caf38e5e005 109 Pfam PF01844 HNH endonuclease 34 94 3.0E-9 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ABE28_006565 e31eff0e9d318a86f82bc042456e93de 205 Pfam PF02698 DUF218 domain 52 193 5.8E-31 T 11-10-2018 IPR003848 Domain of unknown function DUF218 ABE28_009520 7ce1332c051630e1fa73b848dfd70baa 127 SUPERFAMILY SSF54427 5 117 4.25E-21 T 11-10-2018 IPR032710 NTF2-like domain superfamily ABE28_009520 7ce1332c051630e1fa73b848dfd70baa 127 Gene3D G3DSA:3.10.450.50 1 127 4.0E-42 T 11-10-2018 ABE28_009520 7ce1332c051630e1fa73b848dfd70baa 127 Pfam PF12680 SnoaL-like domain 5 110 7.4E-8 T 11-10-2018 IPR037401 SnoaL-like domain ABE28_002170 29f2096849ff57ff2840a12b197c45a6 630 Pfam PF04740 LXG domain of WXG superfamily 2 197 1.4E-35 T 11-10-2018 IPR006829 LXG domain ABE28_002170 29f2096849ff57ff2840a12b197c45a6 630 Pfam PF14449 Pre-toxin TG 255 324 6.7E-18 T 11-10-2018 IPR027797 Pre-toxin TG domain ABE28_019520 4ea762c1c6243537a86ea5c4b473e0fe 635 Pfam PF13515 Fusaric acid resistance protein-like 355 481 1.7E-22 T 11-10-2018 ABE28_009825 2c942b415e43d8b75e1a0553c49eadc3 300 Pfam PF03547 Membrane transport protein 159 295 3.0E-14 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABE28_003345 233c4fed7ed0ac378a15e3393fb96615 96 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 9 92 4.4E-26 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ABE28_003345 233c4fed7ed0ac378a15e3393fb96615 96 Pfam PF12823 Domain of unknown function (DUF3817) 7 92 8.9E-22 T 11-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane ABE28_002290 9b52c5b5bdda4f9866d4d2b6bdfd5f9e 333 SUPERFAMILY SSF81345 27 244 7.85E-6 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_002290 9b52c5b5bdda4f9866d4d2b6bdfd5f9e 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 324 2.5E-42 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_011880 8cc3b44e18a69dd6bf49dcba679d11ca 64 Pfam PF16107 Domain of unknown function (DUF4825) 1 58 4.8E-7 T 11-10-2018 IPR032250 Domain of unknown function DUF4825 ABE28_024190 0a755bd96b91578c0b8707057dce8aae 188 Pfam PF04982 HPP family 68 184 2.7E-43 T 11-10-2018 IPR007065 HPP ABE28_018280 7378497f3d49f55d195dac9c3bfe349a 81 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 76 1.5E-26 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 ABE28_009685 a6299ad6b804a97062998ad12e7db5df 111 SUPERFAMILY SSF81324 2 107 4.71E-18 T 11-10-2018 ABE28_009685 a6299ad6b804a97062998ad12e7db5df 111 Pfam PF07885 Ion channel 30 101 5.4E-13 T 11-10-2018 IPR013099 Potassium channel domain ABE28_009685 a6299ad6b804a97062998ad12e7db5df 111 Gene3D G3DSA:1.10.287.70 1 111 7.8E-30 T 11-10-2018 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 Pfam PF00361 Proton-conducting membrane transporter 127 414 5.5E-51 T 11-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 1.4E-14 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 1.4E-14 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.4E-14 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 1.4E-14 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_021480 7c326666653cb294bed6f0d5987daf1c 493 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 1.4E-14 T 11-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_011735 07b8bbea6d7f356d56af705a8cb880ae 141 SUPERFAMILY SSF82784 1 132 2.88E-36 T 11-10-2018 IPR036102 OsmC/Ohr superfamily ABE28_011735 07b8bbea6d7f356d56af705a8cb880ae 141 Pfam PF02566 OsmC-like protein 33 129 3.2E-17 T 11-10-2018 IPR003718 OsmC/Ohr family ABE28_011735 07b8bbea6d7f356d56af705a8cb880ae 141 Gene3D G3DSA:3.30.300.20 39 133 8.6E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta ABE28_011735 07b8bbea6d7f356d56af705a8cb880ae 141 Gene3D G3DSA:2.20.25.10 1 33 2.3E-5 T 11-10-2018 ABE28_023180 8c2eb9a3ae42060076e104e4da8b6637 401 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 ABE28_023180 8c2eb9a3ae42060076e104e4da8b6637 401 Pfam PF07690 Major Facilitator Superfamily 17 340 3.6E-47 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 ABE28_023180 8c2eb9a3ae42060076e104e4da8b6637 401 SUPERFAMILY SSF103473 1 389 5.1E-66 T 11-10-2018 IPR036259 MFS transporter superfamily ABE28_023180 8c2eb9a3ae42060076e104e4da8b6637 401 Gene3D G3DSA:1.20.1250.20 7 383 1.8E-56 T 11-10-2018 ABE28_020195 d5f0efee8098cc8c509aaf88e7af86ad 239 SUPERFAMILY SSF141571 82 232 1.37E-31 T 11-10-2018 ABE28_020195 d5f0efee8098cc8c509aaf88e7af86ad 239 Gene3D G3DSA:2.160.20.100 58 238 6.5E-35 T 11-10-2018 ABE28_020195 d5f0efee8098cc8c509aaf88e7af86ad 239 Pfam PF13599 Pentapeptide repeats (9 copies) 116 175 1.6E-10 T 11-10-2018 IPR001646 Pentapeptide repeat ABE28_020195 d5f0efee8098cc8c509aaf88e7af86ad 239 Pfam PF00805 Pentapeptide repeats (8 copies) 183 215 2.5E-6 T 11-10-2018 IPR001646 Pentapeptide repeat ABE28_006385 15a494c7135bfbfe2f9732d6f1b280d6 363 Pfam PF08757 CotH kinase protein 48 355 5.5E-81 T 11-10-2018 IPR014867 Spore coat protein CotH ABE28_003450 0395ce01a5d173c339ea4fb545a528b4 76 SUPERFAMILY SSF81342 4 38 8.95E-5 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 ABE28_014485 a7fceb3566cef604002110d18b50794a 392 Pfam PF01578 Cytochrome C assembly protein 73 389 1.7E-34 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 ABE28_014485 a7fceb3566cef604002110d18b50794a 392 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 49 392 1.3E-76 T 11-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 ABE28_008835 910cc578e1156c5c61a8b64c414103ab 73 Gene3D G3DSA:1.10.260.40 4 70 2.0E-8 T 11-10-2018 ABE28_008835 910cc578e1156c5c61a8b64c414103ab 73 SUPERFAMILY SSF47413 13 68 9.19E-9 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 ABE28_008835 910cc578e1156c5c61a8b64c414103ab 73 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 11 70 1.2E-15 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 ABE28_019865 d11c0f1c2eaaaf5def7e2eb6e7fa0add 353 Pfam PF03845 Spore germination protein 13 310 3.5E-21 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_006460 30daf4b65076acc0c765f71690728557 264 SUPERFAMILY SSF51658 1 259 7.33E-51 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily ABE28_006460 30daf4b65076acc0c765f71690728557 264 Gene3D G3DSA:3.20.20.150 1 263 1.7E-60 T 11-10-2018 ABE28_006460 30daf4b65076acc0c765f71690728557 264 Pfam PF01261 Xylose isomerase-like TIM barrel 19 214 2.1E-25 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain ABE28_007585 404606008f278d42cbccf7d718970561 171 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 8.6E-19 T 11-10-2018 IPR019933 DivIVA domain ABE28_007585 404606008f278d42cbccf7d718970561 171 Pfam PF05103 DivIVA protein 3 133 1.5E-49 T 11-10-2018 IPR007793 DivIVA family ABE28_019350 cf3d201182dfbb3ff2efc885c87cde2f 309 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 301 6.6E-88 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain ABE28_019350 cf3d201182dfbb3ff2efc885c87cde2f 309 SUPERFAMILY SSF53590 1 307 1.57E-92 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_019350 cf3d201182dfbb3ff2efc885c87cde2f 309 Gene3D G3DSA:3.90.245.10 1 309 1.2E-102 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like ABE28_005335 816af73cc777f574005ae812d631caf7 204 Pfam PF09335 SNARE associated Golgi protein 30 156 3.8E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_004635 29b33dd37cf259d94f011a53462c1269 172 Gene3D G3DSA:2.60.40.1240 43 167 3.1E-15 T 11-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily ABE28_004635 29b33dd37cf259d94f011a53462c1269 172 Pfam PF11611 Domain of unknown function (DUF4352) 52 156 9.5E-14 T 11-10-2018 IPR029051 Domain of unknown function DUF4352 ABE28_017250 3663d7ca61d7dbf3fba7f38456b526b1 214 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 55 3.7E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017250 3663d7ca61d7dbf3fba7f38456b526b1 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017250 3663d7ca61d7dbf3fba7f38456b526b1 214 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.7E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 ABE28_017250 3663d7ca61d7dbf3fba7f38456b526b1 214 Gene3D G3DSA:1.10.357.10 2 207 2.5E-28 T 11-10-2018 ABE28_017250 3663d7ca61d7dbf3fba7f38456b526b1 214 SUPERFAMILY SSF46689 4 70 1.13E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_012520 d2ba44c2612b6202d88456043a7b4c84 318 SUPERFAMILY SSF53613 4 309 3.12E-80 T 11-10-2018 IPR029056 Ribokinase-like ABE28_012520 d2ba44c2612b6202d88456043a7b4c84 318 Pfam PF00294 pfkB family carbohydrate kinase 7 301 3.2E-48 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB ABE28_012520 d2ba44c2612b6202d88456043a7b4c84 318 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 ABE28_012520 d2ba44c2612b6202d88456043a7b4c84 318 Gene3D G3DSA:3.40.1190.20 5 316 1.9E-87 T 11-10-2018 IPR029056 Ribokinase-like ABE28_016195 4906dc10fad698f38f9b00bb2f1c862b 130 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 11 123 7.3E-26 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane ABE28_016195 4906dc10fad698f38f9b00bb2f1c862b 130 Pfam PF12670 Protein of unknown function (DUF3792) 11 120 1.5E-22 T 11-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane ABE28_022470 17a469ff046d10f4087b85c927b5bb22 140 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 138 3.6E-46 T 11-10-2018 IPR022258 Flagellar operon protein YvyF ABE28_020650 90c62ae66152545b41c1e9c1b6427abf 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 11 44 3.6E-6 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_020650 90c62ae66152545b41c1e9c1b6427abf 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 6.2E-7 T 11-10-2018 IPR001451 Hexapeptide repeat ABE28_020650 90c62ae66152545b41c1e9c1b6427abf 172 Gene3D G3DSA:2.160.10.10 1 172 7.5E-74 T 11-10-2018 ABE28_020650 90c62ae66152545b41c1e9c1b6427abf 172 SUPERFAMILY SSF51161 3 168 6.38E-49 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily ABE28_002130 78824719ecc9ce5d38a574f8a8d5d6a8 226 Pfam PF09335 SNARE associated Golgi protein 71 181 4.4E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_023350 b3384c24f4d69d757e18e0a50eb3262f 430 Pfam PF00860 Permease family 14 391 1.0E-54 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_023350 b3384c24f4d69d757e18e0a50eb3262f 430 PIRSF PIRSF005353 1 430 1.7E-159 T 11-10-2018 IPR026033 Purine permease PbuG-like ABE28_009325 ca9a931e26f72499ad01daea76ff6d04 210 Pfam PF07510 Protein of unknown function (DUF1524) 107 201 2.8E-9 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 ABE28_023900 453e4e372f83a67054fd4ce6ce38fc0f 252 Pfam PF16694 Cytochrome P460 79 172 1.3E-10 T 11-10-2018 IPR032033 Cytochrome P460 ABE28_018360 7b497cbb1976ca1c820938a9dc774917 150 SUPERFAMILY SSF55729 1 144 5.06E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_018360 7b497cbb1976ca1c820938a9dc774917 150 Pfam PF00583 Acetyltransferase (GNAT) family 26 139 1.5E-20 T 11-10-2018 IPR000182 GNAT domain ABE28_018360 7b497cbb1976ca1c820938a9dc774917 150 Gene3D G3DSA:3.40.630.30 1 150 9.8E-42 T 11-10-2018 ABE28_004500 65e5f2056e3c4eec68d59b35ea620dc3 494 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 472 4.9E-148 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_004500 65e5f2056e3c4eec68d59b35ea620dc3 494 PIRSF PIRSF005690 2 492 3.0E-147 T 11-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 ABE28_014305 47c437f947ebb2ccc3a18ee097c27e42 240 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 17 237 4.0E-74 T 11-10-2018 ABE28_006895 6de212d61ecb9753eee7bab802a767ba 341 Pfam PF01757 Acyltransferase family 7 307 2.9E-17 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 148 5.0E-53 T 11-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 Gene3D G3DSA:3.90.79.10 5 153 2.1E-35 T 11-10-2018 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 SUPERFAMILY SSF55811 26 104 6.23E-21 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 Pfam PF00293 NUDIX domain 26 105 3.0E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 PRINTS PR00502 NUDIX hydrolase family signature 46 60 3.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 PRINTS PR00502 NUDIX hydrolase family signature 60 75 3.6E-6 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 ABE28_020740 0731f2a9ac4b9ba5e98528d8197e064c 153 ProSitePatterns PS00893 Nudix box signature. 51 72 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 ABE28_018680 95ff435c09e10ef6e24d508753c31377 167 Gene3D G3DSA:3.40.630.30 1 167 2.1E-43 T 11-10-2018 ABE28_018680 95ff435c09e10ef6e24d508753c31377 167 SUPERFAMILY SSF55729 1 165 5.83E-26 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_018680 95ff435c09e10ef6e24d508753c31377 167 Pfam PF13673 Acetyltransferase (GNAT) domain 40 147 1.7E-15 T 11-10-2018 IPR000182 GNAT domain ABE28_018650 81216fc77e6ee5fbb8fc39f6b2473976 121 Gene3D G3DSA:1.10.10.10 13 121 4.0E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_018650 81216fc77e6ee5fbb8fc39f6b2473976 121 Pfam PF09862 Protein of unknown function (DUF2089) 9 119 3.4E-44 T 11-10-2018 IPR018658 Protein of unknown function DUF2089 ABE28_017140 022995d27527fa1920f7ad293cde8c0f 155 Pfam PF06271 RDD family 22 146 1.1E-20 T 11-10-2018 IPR010432 RDD ABE28_002150 24fe55c9a830de05cc03d8f4465914de 98 Pfam PF13031 Protein of unknown function (DUF3892) 29 96 9.6E-17 T 11-10-2018 IPR024997 Protein of unknown function DUF3892 ABE28_010920 98fc56e12af065e8f3ba0a2a0d772525 361 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 360 4.7E-79 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_010920 98fc56e12af065e8f3ba0a2a0d772525 361 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 196 358 1.2E-26 T 11-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 ABE28_010920 98fc56e12af065e8f3ba0a2a0d772525 361 Gene3D G3DSA:3.30.300.210 212 361 1.4E-20 T 11-10-2018 IPR038501 Spore germination GerAC superfamily ABE28_014560 b87ce7a2b78ec565decfc0c243d76dd0 114 Pfam PF00583 Acetyltransferase (GNAT) family 36 98 4.4E-8 T 11-10-2018 IPR000182 GNAT domain ABE28_014560 b87ce7a2b78ec565decfc0c243d76dd0 114 SUPERFAMILY SSF55729 6 95 3.84E-11 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_014560 b87ce7a2b78ec565decfc0c243d76dd0 114 Gene3D G3DSA:3.40.630.30 3 107 1.3E-13 T 11-10-2018 ABE28_016575 8eb57cf75d0dac815bd3d3e99de2983c 251 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 182 248 4.6E-28 T 11-10-2018 IPR018656 Domain of unknown function DUF2087 ABE28_010200 2bde3c0c097b4d9dc8b4782c81b337fb 212 Gene3D G3DSA:3.40.109.10 2 212 4.3E-58 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_010200 2bde3c0c097b4d9dc8b4782c81b337fb 212 SUPERFAMILY SSF55469 7 211 1.07E-56 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 ABE28_010200 2bde3c0c097b4d9dc8b4782c81b337fb 212 Pfam PF00881 Nitroreductase family 15 192 4.1E-30 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 ABE28_019515 c1ed8f23e6d7f4b41082448ce99de4e4 203 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 193 1.4E-45 T 11-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 ABE28_019515 c1ed8f23e6d7f4b41082448ce99de4e4 203 Gene3D G3DSA:3.40.50.360 1 203 2.2E-65 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_019515 c1ed8f23e6d7f4b41082448ce99de4e4 203 SUPERFAMILY SSF52218 5 195 1.31E-44 T 11-10-2018 IPR029039 Flavoprotein-like superfamily ABE28_019515 c1ed8f23e6d7f4b41082448ce99de4e4 203 Pfam PF03358 NADPH-dependent FMN reductase 7 132 2.5E-17 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 ABE28_009420 f413bbb38a159ab01e322f2549ee45e0 274 Pfam PF05675 Protein of unknown function (DUF817) 18 252 6.9E-106 T 11-10-2018 IPR008535 Protein of unknown function DUF817 ABE28_009420 f413bbb38a159ab01e322f2549ee45e0 274 PIRSF PIRSF009141 7 273 5.9E-130 T 11-10-2018 IPR008535 Protein of unknown function DUF817 ABE28_018215 af6b02ac8e2e114f826879e4c0eb6d23 234 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 212 1.2E-56 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 ABE28_005425 52e77b1c6e5b583f61da2d0dc8100eb8 117 ProDom PD070249 YXLC MEMBRANE TRANSMEMBRANE 23 99 7.0E-5 T 11-10-2018 IPR035238 Protein of unknown function DUF5345 ABE28_005425 52e77b1c6e5b583f61da2d0dc8100eb8 117 Pfam PF17280 Family of unknown function (DUF5345) 23 98 2.3E-17 T 11-10-2018 IPR035238 Protein of unknown function DUF5345 ABE28_007880 c2f0cc3491d8dc98ce40cd43e9e405fa 93 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 81 2.3E-20 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 ABE28_007880 c2f0cc3491d8dc98ce40cd43e9e405fa 93 Gene3D G3DSA:3.40.1690.10 6 90 8.1E-26 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_007880 c2f0cc3491d8dc98ce40cd43e9e405fa 93 SUPERFAMILY SSF160544 6 85 6.93E-24 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal ABE28_003150 d5bb63ce042018d3ef1b7ce0100202b7 125 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 6 124 6.1E-20 T 11-10-2018 IPR006524 Transcription activator, ArpU family ABE28_015270 3f57246a63eadb71d8b890b7a958f706 161 Pfam PF04306 Protein of unknown function (DUF456) 21 158 1.1E-38 T 11-10-2018 IPR007403 Protein of unknown function DUF456 ABE28_009730 6e2948a08b7cb45e43a25fee437ae67b 442 Pfam PF02378 Phosphotransferase system, EIIC 30 352 1.8E-53 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 ABE28_009730 6e2948a08b7cb45e43a25fee437ae67b 442 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 426 3.0E-116 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 ABE28_009730 6e2948a08b7cb45e43a25fee437ae67b 442 PIRSF PIRSF006351 1 436 6.6E-140 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 Gene3D G3DSA:3.40.350.10 5 168 3.4E-30 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 Pfam PF01321 Creatinase/Prolidase N-terminal domain 26 170 5.4E-17 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 SUPERFAMILY SSF53092 9 168 1.83E-28 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 SUPERFAMILY SSF55920 169 392 2.36E-48 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 Gene3D G3DSA:3.90.230.10 169 398 9.8E-41 T 11-10-2018 ABE28_009700 3181e2edae9df4feaf78c122015ef169 411 Pfam PF00557 Metallopeptidase family M24 179 385 3.5E-27 T 11-10-2018 IPR000994 Peptidase M24 ABE28_007750 864e742b90c4427bf5594c2a7e0f3895 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 2.2E-36 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 ABE28_002100 dfb263871aa5156783c189bbd27a3c59 167 Pfam PF02810 SEC-C motif 148 165 5.8E-11 T 11-10-2018 IPR004027 SEC-C motif ABE28_002100 dfb263871aa5156783c189bbd27a3c59 167 Gene3D G3DSA:3.10.450.50 94 167 1.3E-10 T 11-10-2018 ABE28_002100 dfb263871aa5156783c189bbd27a3c59 167 SUPERFAMILY SSF103642 146 166 1.8E-8 T 11-10-2018 ABE28_018245 b06a49363d92fe929e041bf4e374835b 211 Pfam PF04012 PspA/IM30 family 3 209 9.0E-22 T 11-10-2018 IPR007157 PspA/IM30 ABE28_021130 b29f5ba4af6611d8d49ca03a33cc901c 89 Pfam PF06949 Protein of unknown function (DUF1292) 15 86 5.0E-9 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 ABE28_001445 4bf52a293d7a165b332650d83d166564 159 Pfam PF10263 SprT-like family 7 97 1.4E-13 T 11-10-2018 IPR006640 SprT-like ABE28_001445 4bf52a293d7a165b332650d83d166564 159 Hamap MF_00745 Protein SprT-like. 4 150 38.082 T 11-10-2018 IPR023524 Uncharacterised protein family SprT-like ABE28_001445 4bf52a293d7a165b332650d83d166564 159 SMART SM00731 4 150 3.5E-52 T 11-10-2018 IPR006640 SprT-like ABE28_017035 23f17a380699c547ae4962ce0d3a385a 312 Pfam PF02272 DHHA1 domain 183 307 9.3E-16 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 ABE28_017035 23f17a380699c547ae4962ce0d3a385a 312 SUPERFAMILY SSF64182 12 301 7.33E-72 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily ABE28_017035 23f17a380699c547ae4962ce0d3a385a 312 Gene3D G3DSA:3.10.310.30 199 312 2.4E-36 T 11-10-2018 ABE28_017035 23f17a380699c547ae4962ce0d3a385a 312 Gene3D G3DSA:3.90.1640.10 1 197 1.2E-56 T 11-10-2018 ABE28_017035 23f17a380699c547ae4962ce0d3a385a 312 Pfam PF01368 DHH family 15 153 3.7E-12 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 ABE28_003855 fd09d7e6612893cfe93712934ac272b9 190 Gene3D G3DSA:2.30.30.1210 43 189 1.6E-67 T 11-10-2018 ABE28_003855 fd09d7e6612893cfe93712934ac272b9 190 Pfam PF07563 Protein of unknown function (DUF1541) 68 119 2.9E-26 T 11-10-2018 IPR011438 Domain of unknown function DUF1541 ABE28_003855 fd09d7e6612893cfe93712934ac272b9 190 Pfam PF07563 Protein of unknown function (DUF1541) 132 183 4.5E-26 T 11-10-2018 IPR011438 Domain of unknown function DUF1541 ABE28_005095 4feba0ff3b89d8ecc8884945510a1ab0 318 Pfam PF05138 Phenylacetic acid catabolic protein 27 308 3.4E-78 T 11-10-2018 IPR007814 1,2-phenylacetyl-CoA epoxidase, subunit A/C GO:0010124 ABE28_005095 4feba0ff3b89d8ecc8884945510a1ab0 318 TIGRFAM TIGR02156 PA_CoA_Oxy1: phenylacetate-CoA oxygenase, PaaG subunit 17 312 6.9E-134 T 11-10-2018 IPR011881 1,2-phenylacetyl-CoA epoxidase, subunit A GO:0010124|GO:0097266 KEGG: 00360+1.14.13.149 ABE28_005095 4feba0ff3b89d8ecc8884945510a1ab0 318 SUPERFAMILY SSF47240 37 287 3.16E-61 T 11-10-2018 IPR009078 Ferritin-like superfamily ABE28_005095 4feba0ff3b89d8ecc8884945510a1ab0 318 Gene3D G3DSA:1.20.1260.10 9 317 1.8E-112 T 11-10-2018 IPR012347 Ferritin-like ABE28_006130 a32fbf050791e4559d915709017409f6 193 SUPERFAMILY SSF55729 42 115 2.27E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_006130 a32fbf050791e4559d915709017409f6 193 Gene3D G3DSA:3.40.630.30 1 136 9.4E-23 T 11-10-2018 ABE28_006130 a32fbf050791e4559d915709017409f6 193 Pfam PF13508 Acetyltransferase (GNAT) domain 48 110 1.7E-9 T 11-10-2018 IPR000182 GNAT domain ABE28_021905 2a54097abcf6b59a6259e7433f5089b1 109 Pfam PF06103 Bacterial protein of unknown function (DUF948) 6 93 5.2E-13 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 ABE28_022640 d658bd7b513b45fd81fc65bd9b7bb43a 202 Pfam PF01810 LysE type translocator 14 199 6.5E-28 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 ABE28_003355 8ac9cb09c8b21ee3ed89bf3fca018475 636 Pfam PF02687 FtsX-like permease family 85 169 8.6E-8 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 ABE28_003355 8ac9cb09c8b21ee3ed89bf3fca018475 636 PIRSF PIRSF018968 1 632 4.4E-125 T 11-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 ABE28_004525 78c44998073f77754530082a68c77e61 394 Pfam PF12051 Protein of unknown function (DUF3533) 12 352 1.6E-26 T 11-10-2018 IPR022703 Domain of unknown function DUF3533 ABE28_008965 8c907253fb52cfa03c768cf36a1b330b 125 Pfam PF05135 Phage gp6-like head-tail connector protein 1 88 2.1E-7 T 11-10-2018 IPR021146 Phage gp6-like head-tail connector protein ABE28_010255 cefa0bc778062f4151a151b011be4882 156 Gene3D G3DSA:1.10.10.10 2 145 4.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily ABE28_010255 cefa0bc778062f4151a151b011be4882 156 SUPERFAMILY SSF46785 6 147 1.98E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily ABE28_010255 cefa0bc778062f4151a151b011be4882 156 SMART SM00347 26 129 1.4E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010255 cefa0bc778062f4151a151b011be4882 156 Pfam PF01047 MarR family 36 91 3.6E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 ABE28_010255 cefa0bc778062f4151a151b011be4882 156 ProSitePatterns PS01117 MarR-type HTH domain signature. 65 99 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site ABE28_004760 0c98a302fb62cec26951c180c507f9c2 199 Pfam PF09335 SNARE associated Golgi protein 32 157 3.7E-17 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_010350 150dc805fa838b4c040f7db4e40c6552 335 Pfam PF01965 DJ-1/PfpI family 3 181 1.0E-11 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 ABE28_010350 150dc805fa838b4c040f7db4e40c6552 335 SUPERFAMILY SSF52317 2 201 2.9E-27 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_010350 150dc805fa838b4c040f7db4e40c6552 335 Gene3D G3DSA:3.40.50.880 2 225 1.3E-43 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like ABE28_023885 e196f366eabc810f4fc47b2cef252a3b 155 Gene3D G3DSA:2.40.100.20 43 155 9.5E-20 T 11-10-2018 ABE28_023885 e196f366eabc810f4fc47b2cef252a3b 155 SUPERFAMILY SSF50891 43 154 6.07E-21 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily ABE28_023885 e196f366eabc810f4fc47b2cef252a3b 155 Pfam PF04126 Cyclophilin-like 42 153 2.9E-11 T 11-10-2018 IPR025658 Cyclophilin TM1367-like domain ABE28_002685 880deb16adeb9e337f254ac86b162c5b 91 Pfam PF10719 Late competence development protein ComFB 6 89 5.9E-18 T 11-10-2018 IPR019657 Late competence development protein ComFB ABE28_013615 01b6860287f5f72801cfb1fb30361802 414 SUPERFAMILY SSF53850 34 408 1.88E-86 T 11-10-2018 ABE28_013615 01b6860287f5f72801cfb1fb30361802 414 Gene3D G3DSA:3.40.190.10 20 410 1.7E-102 T 11-10-2018 ABE28_013615 01b6860287f5f72801cfb1fb30361802 414 Pfam PF01547 Bacterial extracellular solute-binding protein 45 327 2.6E-43 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein ABE28_004290 5068f6e7c945d7970995e32eef287ac3 357 Pfam PF03845 Spore germination protein 6 316 2.2E-24 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_016180 3ac72a851494c6a8cec49de95e60a0b5 101 Pfam PF13797 Post-transcriptional regulator 9 88 3.5E-26 T 11-10-2018 IPR025716 Post-transcriptional regulator ABE28_001265 5f0b95b1fbbb6d554f05bb92ce8152c8 56 SUPERFAMILY SSF69047 5 54 1.05E-10 T 11-10-2018 IPR036629 YjbJ superfamily ABE28_001265 5f0b95b1fbbb6d554f05bb92ce8152c8 56 Gene3D G3DSA:1.10.1470.10 5 55 1.4E-8 T 11-10-2018 IPR036629 YjbJ superfamily ABE28_001265 5f0b95b1fbbb6d554f05bb92ce8152c8 56 Pfam PF05532 CsbD-like 6 54 1.5E-14 T 11-10-2018 IPR008462 CsbD-like domain ABE28_015805 b3fac37ed0c32da0f899d083e17801a1 322 Pfam PF08378 Nuclease-related domain 41 154 4.6E-19 T 11-10-2018 IPR011528 Nuclease-related domain, NERD ABE28_014665 e5a70aa4a524e5dc0fcc752f015d85fc 183 Gene3D G3DSA:3.90.79.10 3 181 7.3E-56 T 11-10-2018 ABE28_014665 e5a70aa4a524e5dc0fcc752f015d85fc 183 Pfam PF00293 NUDIX domain 42 157 2.4E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_014665 e5a70aa4a524e5dc0fcc752f015d85fc 183 SUPERFAMILY SSF55811 7 179 6.36E-49 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_022415 ce8010759dc98f86ddca08b3512bb9fc 493 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 1 95 2.7E-22 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 ABE28_022415 ce8010759dc98f86ddca08b3512bb9fc 493 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 482 3.9E-48 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 ABE28_023650 d3519655e0609fa3cafb1a099c6b81ca 265 Gene3D G3DSA:3.30.310.160 71 182 5.3E-59 T 11-10-2018 ABE28_023650 d3519655e0609fa3cafb1a099c6b81ca 265 Pfam PF09648 YycH protein 39 250 6.2E-55 T 11-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 ABE28_023650 d3519655e0609fa3cafb1a099c6b81ca 265 Gene3D G3DSA:3.10.450.660 47 252 5.3E-59 T 11-10-2018 ABE28_018015 004dbfe8ad4918a5fe507b1b90419de8 134 Pfam PF07681 DoxX 8 86 4.5E-18 T 11-10-2018 IPR032808 DoxX family ABE28_001595 1dbac44dd785e6eb22d451afe7077cc3 388 Pfam PF05684 Protein of unknown function (DUF819) 10 387 3.0E-116 T 11-10-2018 IPR008537 Protein of unknown function DUF819 ABE28_005275 61412862a53a30435440fbe0e29eb640 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 115 5.1E-15 T 11-10-2018 IPR000182 GNAT domain ABE28_005275 61412862a53a30435440fbe0e29eb640 151 Gene3D G3DSA:3.40.630.30 1 151 2.2E-47 T 11-10-2018 ABE28_005275 61412862a53a30435440fbe0e29eb640 151 SUPERFAMILY SSF55729 15 148 3.04E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_003465 f175ac50c1983caa06e6d745c2f844b0 178 Pfam PF14345 GDYXXLXY protein 15 174 8.2E-32 T 11-10-2018 IPR025833 GDYXXLXY protein ABE28_008985 9b1b4dba9f6f354fa83d228d8ec4d7dd 327 Pfam PF11863 Protein of unknown function (DUF3383) 100 275 8.7E-12 T 11-10-2018 IPR021808 Protein of unknown function DUF3383 ABE28_004965 c29931518fe31ef3f38083ac0394464c 203 Pfam PF02417 Chromate transporter 18 183 2.1E-36 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 ABE28_001025 d79587ce48537cb2eda4c905f24cc1a6 494 Gene3D G3DSA:1.10.4160.10 2 468 1.2E-102 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ABE28_001025 d79587ce48537cb2eda4c905f24cc1a6 494 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 432 1.2E-55 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABE28_003520 d6f4433cd632b0cad0e1c13761415082 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 5.4E-12 T 11-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 ABE28_020305 1cac0b8213d1ca3231a6c5f6769f76f6 211 Pfam PF13599 Pentapeptide repeats (9 copies) 126 194 4.9E-9 T 11-10-2018 IPR001646 Pentapeptide repeat ABE28_020305 1cac0b8213d1ca3231a6c5f6769f76f6 211 Pfam PF13599 Pentapeptide repeats (9 copies) 27 93 9.7E-9 T 11-10-2018 IPR001646 Pentapeptide repeat ABE28_020305 1cac0b8213d1ca3231a6c5f6769f76f6 211 Gene3D G3DSA:2.160.20.100 1 210 1.3E-51 T 11-10-2018 ABE28_020305 1cac0b8213d1ca3231a6c5f6769f76f6 211 SUPERFAMILY SSF141571 34 209 2.88E-39 T 11-10-2018 ABE28_011495 59ba3d168912d9c5c70f0645dd332d8b 320 Pfam PF03060 Nitronate monooxygenase 79 301 4.1E-46 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_011495 59ba3d168912d9c5c70f0645dd332d8b 320 Pfam PF03060 Nitronate monooxygenase 2 74 1.3E-16 T 11-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 ABE28_011495 59ba3d168912d9c5c70f0645dd332d8b 320 Gene3D G3DSA:3.20.20.70 1 315 9.1E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 ABE28_011495 59ba3d168912d9c5c70f0645dd332d8b 320 SUPERFAMILY SSF51412 2 307 3.79E-66 T 11-10-2018 ABE28_001760 5e2418a02fb4bc5be8c4fcb76ee98fdd 976 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 10 198 4.5E-61 T 11-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 ABE28_017435 2a672509f2256af1a2bfe7e8f1346117 260 SUPERFAMILY SSF56112 2 212 1.02E-30 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily ABE28_017435 2a672509f2256af1a2bfe7e8f1346117 260 Gene3D G3DSA:3.90.1200.10 74 255 2.6E-19 T 11-10-2018 ABE28_017435 2a672509f2256af1a2bfe7e8f1346117 260 Pfam PF01636 Phosphotransferase enzyme family 40 215 2.8E-21 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase ABE28_021200 7ac4e69bbcf0fb5bf62bd9f7d839aef9 115 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 104 9.3E-30 T 11-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV ABE28_017355 cfa934cd4683ae0a50d6db69806ad3ac 169 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 95 3.8E-28 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 ABE28_003325 7860114495bb35a238cdaf64ef728de9 113 Gene3D G3DSA:4.10.820.10 58 113 9.3E-14 T 11-10-2018 IPR037003 Translocated intimin receptor, central domain superfamily GO:0005515 ABE28_017540 ba872a56515e507d830055ad26c3dbf8 236 Pfam PF01323 DSBA-like thioredoxin domain 2 204 1.3E-50 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 ABE28_017540 ba872a56515e507d830055ad26c3dbf8 236 SUPERFAMILY SSF52833 1 211 1.4E-49 T 11-10-2018 IPR036249 Thioredoxin-like superfamily ABE28_017540 ba872a56515e507d830055ad26c3dbf8 236 Gene3D G3DSA:3.40.30.10 1 208 9.5E-80 T 11-10-2018 ABE28_005985 f6fea878fa8d1e3e165003b28fe4378e 63 Pfam PF12758 Protein of unknown function (DUF3813) 1 61 4.4E-22 T 11-10-2018 IPR024217 Protein of unknown function DUF3813 ABE28_007380 d768298967470f0f1294002c9954d368 91 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 2.3E-30 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 ABE28_007380 d768298967470f0f1294002c9954d368 91 PIRSF PIRSF031653 1 91 6.3E-36 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 ABE28_007380 d768298967470f0f1294002c9954d368 91 Hamap MF_01126 UPF0298 protein . 1 78 22.705 T 11-10-2018 IPR016979 Protein of unknown function DUF2129 ABE28_009505 b24a9f7e750d8dacd597c5074030823c 147 Pfam PF03547 Membrane transport protein 19 140 9.9E-9 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 ABE28_011930 deed0a7f9bc00b863f6f08b28f4f69c3 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 206 1.5E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_011930 deed0a7f9bc00b863f6f08b28f4f69c3 217 SUPERFAMILY SSF161098 12 196 2.22E-40 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011930 deed0a7f9bc00b863f6f08b28f4f69c3 217 Gene3D G3DSA:1.10.3720.10 11 207 8.3E-35 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_003180 6f6783360ecd78b09784bc0eb275b4b2 104 Pfam PF05119 Phage terminase, small subunit 18 75 1.1E-5 T 11-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family ABE28_013375 e461e780f32e6de47b9cd8015e8ead09 236 Gene3D G3DSA:3.40.390.10 131 236 6.0E-14 T 11-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 ABE28_013375 e461e780f32e6de47b9cd8015e8ead09 236 SUPERFAMILY SSF55486 95 235 7.32E-28 T 11-10-2018 ABE28_020150 fcbbf034f2a8c3ea8ca6aa1bae82abf3 338 Pfam PF12698 ABC-2 family transporter protein 19 329 2.2E-32 T 11-10-2018 ABE28_001880 4d6178fc80c11f53a280f3268c1f7e08 66 Pfam PF14044 NETI protein 8 63 8.0E-28 T 11-10-2018 IPR025930 NETI protein ABE28_009050 ade7f92747e7190afb8fe217845b1909 786 Gene3D G3DSA:3.40.50.1110 531 779 2.5E-11 T 11-10-2018 IPR036514 SGNH hydrolase superfamily ABE28_009050 ade7f92747e7190afb8fe217845b1909 786 SUPERFAMILY SSF52266 552 783 3.5E-12 T 11-10-2018 ABE28_005840 e3eac6f2d3bcdfb7326dc56ec99aee99 63 Gene3D G3DSA:4.10.810.10 4 61 9.9E-10 T 11-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 ABE28_005840 e3eac6f2d3bcdfb7326dc56ec99aee99 63 Pfam PF08858 IDEAL domain 21 53 7.2E-10 T 11-10-2018 IPR014957 IDEAL domain ABE28_005840 e3eac6f2d3bcdfb7326dc56ec99aee99 63 SMART SM00914 18 54 8.8E-8 T 11-10-2018 IPR014957 IDEAL domain ABE28_017560 dc6d43931e2e073c1e926cf48fbf5d1f 254 Pfam PF09323 Domain of unknown function (DUF1980) 9 120 3.8E-21 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 ABE28_017560 dc6d43931e2e073c1e926cf48fbf5d1f 254 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 26 245 1.4E-49 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 ABE28_011055 ccaca0431aef21c3851405ab4d89824f 142 ProDom PD085159 YWQH COILED COIL 1 138 2.0E-23 T 11-10-2018 IPR020326 Uncharacterised protein family YwqH ABE28_011055 ccaca0431aef21c3851405ab4d89824f 142 Pfam PF16888 Domain of unknown function (DUF5082) 12 104 3.8E-13 T 11-10-2018 IPR031681 Protein of unknown function DUF5082 ABE28_010610 a4350729d2cf25528fcd31a4e43aac3b 438 Pfam PF03553 Na+/H+ antiporter family 237 422 1.9E-15 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ABE28_010610 a4350729d2cf25528fcd31a4e43aac3b 438 Pfam PF03553 Na+/H+ antiporter family 24 211 9.2E-14 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ABE28_018270 9c5c88d48b93ea1dffdcc9726b9fa043 284 Gene3D G3DSA:1.20.58.480 25 284 8.7E-96 T 11-10-2018 ABE28_018270 9c5c88d48b93ea1dffdcc9726b9fa043 284 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 21 284 9.0E-127 T 11-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 ABE28_018270 9c5c88d48b93ea1dffdcc9726b9fa043 284 Pfam PF03301 Tryptophan 2,3-dioxygenase 20 283 1.4E-67 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ABE28_018270 9c5c88d48b93ea1dffdcc9726b9fa043 284 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 21 284 39.888 T 11-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ABE28_018270 9c5c88d48b93ea1dffdcc9726b9fa043 284 SUPERFAMILY SSF140959 27 284 6.54E-99 T 11-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 ABE28_008120 03bc9f9dcbd292908d665bbd9d4f0da7 263 Pfam PF01148 Cytidylyltransferase family 2 261 1.1E-72 T 11-10-2018 ABE28_014955 9fd9a9c0e115b5b3091d3f0f92a7a146 137 Pfam PF03780 Asp23 family, cell envelope-related function 19 122 1.3E-34 T 11-10-2018 IPR005531 Alkaline shock protein Asp23 ABE28_006655 bad64e0eadbe1ddf5f3b5518116473aa 179 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 92 161 2.0E-18 T 11-10-2018 IPR039561 Peptidase M15C GO:0008233 ABE28_006655 bad64e0eadbe1ddf5f3b5518116473aa 179 SUPERFAMILY SSF55166 39 161 2.49E-27 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_006655 bad64e0eadbe1ddf5f3b5518116473aa 179 Gene3D G3DSA:3.30.1380.10 30 161 4.8E-38 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 ABE28_004270 8dded553a0f4070a22fcebfe0000a61b 311 Pfam PF04227 Indigoidine synthase A like protein 10 298 3.9E-130 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 ABE28_004270 8dded553a0f4070a22fcebfe0000a61b 311 Gene3D G3DSA:3.40.1790.10 1 304 2.2E-132 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 ABE28_004270 8dded553a0f4070a22fcebfe0000a61b 311 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 9 302 41.73 T 11-10-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 ABE28_004270 8dded553a0f4070a22fcebfe0000a61b 311 SUPERFAMILY SSF110581 2 300 2.75E-114 T 11-10-2018 IPR022830 Indigoidine synthase A-like GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 ABE28_011310 2effe393b139e549704b6ee348e29838 443 Pfam PF01943 Polysaccharide biosynthesis protein 5 294 2.8E-18 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_011310 2effe393b139e549704b6ee348e29838 443 PIRSF PIRSF038958 1 443 1.2E-67 T 11-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type ABE28_011505 4d14dbd6c507041a744e25c1b7d1c30e 166 Pfam PF09970 Nucleotidyl transferase of unknown function (DUF2204) 4 140 1.9E-4 T 11-10-2018 IPR018700 Protein of unknown function DUF2204 ABE28_004515 c44f4cc42d8960945e4b03c0735c0c3b 292 Pfam PF03773 Predicted permease 6 284 6.5E-76 T 11-10-2018 IPR005524 Predicted permease DUF318 ABE28_024035 3c69bc2e9e5a797df6b164862302823b 251 SUPERFAMILY SSF53335 13 230 1.15E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase ABE28_024035 3c69bc2e9e5a797df6b164862302823b 251 Pfam PF08241 Methyltransferase domain 54 149 3.7E-24 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 ABE28_024035 3c69bc2e9e5a797df6b164862302823b 251 Gene3D G3DSA:3.40.50.150 38 251 1.7E-58 T 11-10-2018 ABE28_005615 4599980b69f420c88e698d04aee0c245 150 SUPERFAMILY SSF109854 6 142 1.74E-19 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_005615 4599980b69f420c88e698d04aee0c245 150 Pfam PF12867 DinB superfamily 7 138 1.3E-16 T 11-10-2018 IPR024775 DinB-like domain ABE28_005615 4599980b69f420c88e698d04aee0c245 150 Gene3D G3DSA:1.20.120.450 2 143 8.8E-13 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_016890 b80a31d561cc59d2a8e618ecf87a586a 473 Pfam PF07261 Replication initiation and membrane attachment 328 393 1.9E-6 T 11-10-2018 IPR006343 DnaD domain ABE28_016890 b80a31d561cc59d2a8e618ecf87a586a 473 ProDom PD042352 MG349 G12_ORF413 HOMOLOG 26 264 0.002 T 11-10-2018 ABE28_012270 49c377e944af57390a4c8a26f6d2fdc8 204 SUPERFAMILY SSF55811 27 196 3.52E-27 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_012270 49c377e944af57390a4c8a26f6d2fdc8 204 Pfam PF00293 NUDIX domain 27 102 7.3E-10 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_012270 49c377e944af57390a4c8a26f6d2fdc8 204 Gene3D G3DSA:3.90.79.10 1 201 1.7E-45 T 11-10-2018 ABE28_016735 f8f9d794e5d69d89e43814cac5ffa9e8 181 Pfam PF02674 Colicin V production protein 2 164 4.9E-36 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 ABE28_021835 4c5ba6fffdcd97e59141f5f1cc6fad71 111 Pfam PF07875 Coat F domain 21 80 1.9E-20 T 11-10-2018 IPR012851 Spore coat protein CotF-like ABE28_011885 2a0b841edc9ad66cbb6d9c0838ae6f55 134 Gene3D G3DSA:3.90.1720.10 10 134 2.4E-40 T 11-10-2018 ABE28_011885 2a0b841edc9ad66cbb6d9c0838ae6f55 134 SUPERFAMILY SSF54001 18 134 1.18E-36 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily ABE28_011885 2a0b841edc9ad66cbb6d9c0838ae6f55 134 Pfam PF00877 NlpC/P60 family 30 132 2.2E-29 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain ABE28_003800 8afc29367bc3626d9df258b00c8f8fda 177 SUPERFAMILY SSF53254 48 176 4.71E-13 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_003800 8afc29367bc3626d9df258b00c8f8fda 177 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 46 175 3.3E-9 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 ABE28_003800 8afc29367bc3626d9df258b00c8f8fda 177 Gene3D G3DSA:3.40.50.1240 1 176 4.2E-11 T 11-10-2018 IPR029033 Histidine phosphatase superfamily ABE28_000200 b922990d7b86e76a0892e599ca1d260f 51 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 47 2.8E-4 T 11-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 ABE28_000200 b922990d7b86e76a0892e599ca1d260f 51 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 6 15 - T 11-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 ABE28_023595 8a5f55555e635b11e68494d34a62dcf9 231 Pfam PF16316 Domain of unknown function (DUF4956) 42 189 4.3E-10 T 11-10-2018 IPR032531 Protein of unknown function DUF4956 ABE28_023595 8a5f55555e635b11e68494d34a62dcf9 231 SUPERFAMILY SSF161098 31 170 1.5E-5 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_013060 b49bd6b6bdaaf8e476a637c8e481bfd2 227 Pfam PF04172 LrgB-like family 13 224 4.3E-65 T 11-10-2018 IPR007300 CidB/LrgB family ABE28_021585 5ccdc9fbbd78b506d7c312b56de1362c 237 Pfam PF09986 Uncharacterized protein conserved in bacteria (DUF2225) 7 222 6.5E-59 T 11-10-2018 IPR018708 Protein of unknown function DUF2225 ABE28_004510 8ee4cdcd22821b7f61192a70a20393db 278 Pfam PF09323 Domain of unknown function (DUF1980) 3 183 1.0E-53 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 ABE28_004510 8ee4cdcd22821b7f61192a70a20393db 278 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 20 273 6.6E-59 T 11-10-2018 IPR015402 Protein of unknown function DUF1980 ABE28_015860 4a9562e80c164e430c3aa9d1c659ec34 379 SUPERFAMILY SSF53756 21 320 1.57E-13 T 11-10-2018 ABE28_015860 4a9562e80c164e430c3aa9d1c659ec34 379 Gene3D G3DSA:3.40.50.2000 202 357 1.6E-28 T 11-10-2018 ABE28_018935 ce4ecfbb411fbb536aa35e0cf139c286 372 Pfam PF03812 2-keto-3-deoxygluconate permease 3 344 5.8E-87 T 11-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ABE28_018935 ce4ecfbb411fbb536aa35e0cf139c286 372 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 276 2.0E-38 T 11-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 ABE28_023190 aac8a8592b06d7feeedbe083f87f3903 364 Pfam PF07995 Glucose / Sorbosone dehydrogenase 50 341 5.8E-68 T 11-10-2018 IPR012938 Glucose/Sorbosone dehydrogenase ABE28_023190 aac8a8592b06d7feeedbe083f87f3903 364 SUPERFAMILY SSF50952 43 341 4.18E-39 T 11-10-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 ABE28_023190 aac8a8592b06d7feeedbe083f87f3903 364 Gene3D G3DSA:2.120.10.30 20 357 5.0E-102 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like ABE28_022815 cbbace241444fa8d6b599d941482fa1d 170 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 10 160 42.876 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022815 cbbace241444fa8d6b599d941482fa1d 170 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 46 155 4.8E-26 T 11-10-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_022815 cbbace241444fa8d6b599d941482fa1d 170 Gene3D G3DSA:3.40.50.12280 4 169 8.7E-77 T 11-10-2018 ABE28_022815 cbbace241444fa8d6b599d941482fa1d 170 SUPERFAMILY SSF56770 19 163 3.14E-66 T 11-10-2018 ABE28_022815 cbbace241444fa8d6b599d941482fa1d 170 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 20 161 1.6E-72 T 11-10-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 ABE28_000765 32138e2b26323aed0f7570764363d425 176 Pfam PF07155 ECF-type riboflavin transporter, S component 12 170 8.7E-41 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 ABE28_000765 32138e2b26323aed0f7570764363d425 176 Gene3D G3DSA:1.10.1760.20 9 173 1.8E-47 T 11-10-2018 ABE28_010720 492c37898834d578e8b6ad01856778e4 77 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 5 70 1.6E-21 T 11-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like ABE28_010720 492c37898834d578e8b6ad01856778e4 77 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 76 21.209 T 11-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like ABE28_023715 6b55893430194836907a35de8189c39e 315 Pfam PF09991 Predicted membrane protein (DUF2232) 15 303 1.1E-59 T 11-10-2018 IPR018710 Protein of unknown function DUF2232 ABE28_003880 53c98e618fe5b909d92d946ef90903c0 597 Gene3D G3DSA:3.40.50.2000 206 366 1.5E-7 T 11-10-2018 ABE28_003880 53c98e618fe5b909d92d946ef90903c0 597 SUPERFAMILY SSF53756 142 392 6.07E-7 T 11-10-2018 ABE28_011920 0e17e71d1fc3d2e3bffa1116995836ec 220 SUPERFAMILY SSF161098 18 200 2.88E-34 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011920 0e17e71d1fc3d2e3bffa1116995836ec 220 Gene3D G3DSA:1.10.3720.10 12 210 3.9E-30 T 11-10-2018 IPR035906 MetI-like superfamily ABE28_011920 0e17e71d1fc3d2e3bffa1116995836ec 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 211 6.9E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 ABE28_019660 271bbaa7b8a4501842fedf490b67d188 440 TIGRFAM TIGR00784 citMHS: citrate transporter 3 439 3.5E-199 T 11-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 ABE28_019660 271bbaa7b8a4501842fedf490b67d188 440 Pfam PF03600 Citrate transporter 14 385 2.2E-46 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 ABE28_014455 407275631d1265b28afc1d49993422e6 193 PIRSF PIRSF037778 2 188 1.3E-43 T 11-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 ABE28_014455 407275631d1265b28afc1d49993422e6 193 Gene3D G3DSA:1.10.1760.20 3 191 2.6E-49 T 11-10-2018 ABE28_014455 407275631d1265b28afc1d49993422e6 193 Pfam PF12822 ECF transporter, substrate-specific component 7 176 3.6E-24 T 11-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 ABE28_015730 dbb41b9be4975541c3d5b37de410bf5a 96 Pfam PF06949 Protein of unknown function (DUF1292) 13 89 7.0E-18 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 ABE28_015730 dbb41b9be4975541c3d5b37de410bf5a 96 Hamap MF_01448 UPF0473 protein . 4 90 21.72 T 11-10-2018 IPR009711 Uncharacterised protein family UPF0473 ABE28_012775 3828eeec66078cc7f22904b79987fd9a 278 Pfam PF00753 Metallo-beta-lactamase superfamily 34 245 3.5E-34 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_012775 3828eeec66078cc7f22904b79987fd9a 278 SMART SM00849 35 245 1.8E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase ABE28_012775 3828eeec66078cc7f22904b79987fd9a 278 Gene3D G3DSA:3.60.15.10 9 260 1.4E-42 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_012775 3828eeec66078cc7f22904b79987fd9a 278 SUPERFAMILY SSF56281 19 259 4.19E-49 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like ABE28_014435 0d9ece0ef953652c06b38274816bc56d 193 Pfam PF02517 CAAX protease self-immunity 98 180 1.7E-10 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ABE28_019585 19f4e0c041679063c1707d58ba5e1325 114 Pfam PF13564 DoxX-like family 7 105 1.0E-21 T 11-10-2018 IPR032808 DoxX family ABE28_014885 958af7d7ab12ecbc611bacaa1128d8ad 78 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 3.0E-15 T 11-10-2018 IPR020138 Uncharacterised protein family YqzF ABE28_014885 958af7d7ab12ecbc611bacaa1128d8ad 78 Pfam PF11118 Protein of unknown function (DUF2627) 2 77 8.4E-35 T 11-10-2018 IPR020138 Uncharacterised protein family YqzF ABE28_023535 0156a3afdeb4c768a6142109a9055e02 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 40 307 8.5E-56 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_008870 a785606036704d8d470573ae6dd50e1b 139 Pfam PF13392 HNH endonuclease 25 65 2.0E-13 T 11-10-2018 IPR003615 HNH nuclease ABE28_008870 a785606036704d8d470573ae6dd50e1b 139 SUPERFAMILY SSF54060 15 122 1.24E-14 T 11-10-2018 ABE28_019395 ced5b69c5e36447405e5c6f6ddf7c96a 646 TIGRFAM TIGR03693 ocin_ThiF_like: putative thiazole-containing bacteriocin maturation protein 1 644 2.6E-212 T 11-10-2018 IPR022368 Putative thiazole-containing bacteriocin maturation protein ABE28_019395 ced5b69c5e36447405e5c6f6ddf7c96a 646 Gene3D G3DSA:3.40.50.720 162 333 1.8E-13 T 11-10-2018 ABE28_010690 d36374124a30b04c789af24f63964e84 47 Pfam PF08179 Small acid-soluble spore protein P family 1 42 2.7E-22 T 11-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 ABE28_010690 d36374124a30b04c789af24f63964e84 47 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 47 16.969 T 11-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 ABE28_010005 3b7e5679acf6315a2e7c1ca888577ae9 132 Pfam PF07681 DoxX 5 93 9.6E-19 T 11-10-2018 IPR032808 DoxX family ABE28_010500 2d3296acb242d1e9f2db9c9a159e6e4a 208 Gene3D G3DSA:3.90.79.10 1 202 1.3E-36 T 11-10-2018 ABE28_010500 2d3296acb242d1e9f2db9c9a159e6e4a 208 Pfam PF00293 NUDIX domain 35 155 3.7E-6 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 ABE28_010500 2d3296acb242d1e9f2db9c9a159e6e4a 208 SUPERFAMILY SSF55811 5 156 2.44E-23 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 ABE28_024005 caf52d2d63ab045159b70ba56da6bcb1 206 Pfam PF14150 YesK-like protein 1 64 7.2E-6 T 11-10-2018 IPR025434 YesK-like protein ABE28_012540 418fa2efcc5f3bcc447d0290c79965e5 283 Pfam PF01925 Sulfite exporter TauE/SafE 8 245 3.0E-40 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 ABE28_008570 b23ea3461ef9a74a28eb36f687dbaa7c 199 Pfam PF03458 UPF0126 domain 92 160 1.1E-17 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ABE28_008570 b23ea3461ef9a74a28eb36f687dbaa7c 199 Pfam PF03458 UPF0126 domain 5 78 1.5E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ABE28_018175 8a5d21379e434bce3cd3a243f521d165 277 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 33 262 1.6E-77 T 11-10-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 ABE28_018175 8a5d21379e434bce3cd3a243f521d165 277 SUPERFAMILY SSF110710 1 264 5.75E-93 T 11-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like ABE28_020090 37904034a397b423a4e606c569108508 292 Pfam PF03313 Serine dehydratase alpha chain 15 274 1.7E-77 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit ABE28_020090 37904034a397b423a4e606c569108508 292 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 288 2.8E-141 T 11-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 ABE28_023305 de48e8ab9db1df1686a98482c2313f40 242 ProDom PD835662 MEMBRANE PROTEIN YYBK 5 202 3.0E-16 T 11-10-2018 IPR024295 Protein of unknown function DUF2705 ABE28_023305 de48e8ab9db1df1686a98482c2313f40 242 Pfam PF10920 Protein of unknown function (DUF2705) 8 240 4.1E-30 T 11-10-2018 IPR024295 Protein of unknown function DUF2705 ABE28_002875 5bf72a2b30b1613b0e490cdcce81130e 66 Pfam PF11755 Protein of unknown function (DUF3311) 6 64 5.7E-21 T 11-10-2018 IPR021741 Protein of unknown function DUF3311 ABE28_009540 db90cef9d30cc7ff8f0133c63797844e 249 Pfam PF03741 Integral membrane protein TerC family 16 199 1.6E-43 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 ABE28_009540 db90cef9d30cc7ff8f0133c63797844e 249 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 239 5.2E-74 T 11-10-2018 IPR022493 Integral membrane YkoY ABE28_002975 a3954b2113157c257024408c1b09110b 60 Gene3D G3DSA:3.30.70.100 1 60 3.8E-10 T 11-10-2018 ABE28_002975 a3954b2113157c257024408c1b09110b 60 Pfam PF00403 Heavy-metal-associated domain 7 55 1.1E-7 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 ABE28_002975 a3954b2113157c257024408c1b09110b 60 SUPERFAMILY SSF55008 1 57 2.36E-10 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 ABE28_014700 5db2d6173104dfd2263e567fb9869336 111 Pfam PF08863 YolD-like protein 14 107 5.5E-27 T 11-10-2018 IPR014962 YolD-like protein ABE28_012095 c466d66d6ce50c5776ab0fa403e3aad5 31 Pfam PF10055 Uncharacterized small protein (DUF2292) 1 29 2.5E-16 T 11-10-2018 IPR018743 Protein of unknown function DUF2292 ABE28_023270 98f692e9d49c06af1f8c533819698218 322 Pfam PF01497 Periplasmic binding protein 64 295 3.2E-36 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain ABE28_023270 98f692e9d49c06af1f8c533819698218 322 Gene3D G3DSA:3.40.50.1980 24 179 1.0E-37 T 11-10-2018 ABE28_023270 98f692e9d49c06af1f8c533819698218 322 SUPERFAMILY SSF53807 42 317 1.37E-65 T 11-10-2018 ABE28_023270 98f692e9d49c06af1f8c533819698218 322 Gene3D G3DSA:3.40.50.1980 186 318 9.1E-41 T 11-10-2018 ABE28_019890 3e992720221e843ee0f0d96e9ea2b638 140 Pfam PF07849 Protein of unknown function (DUF1641) 100 121 5.7E-6 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 ABE28_006580 79f688eed75c00150ab56b417175500a 297 Pfam PF08874 Domain of unknown function (DUF1835) 17 139 1.2E-32 T 11-10-2018 IPR014973 Protein of unknown function DUF1835 ABE28_006580 79f688eed75c00150ab56b417175500a 297 Pfam PF12395 Protein of unknown function 179 288 5.4E-24 T 11-10-2018 IPR022123 Protein of unknown function DUF3658 ABE28_019720 4102f77b8ea503a62fc44c870c4c8824 95 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 10 82 6.4E-11 T 11-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 ABE28_019720 4102f77b8ea503a62fc44c870c4c8824 95 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 1 92 3.6E-32 T 11-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 ABE28_009990 f8be228273ee82f57784d45af07e8160 128 Pfam PF08858 IDEAL domain 74 98 1.3E-5 T 11-10-2018 IPR014957 IDEAL domain ABE28_004360 364c5ac9db3499ca62eabf54c7494ff8 60 Pfam PF13314 Domain of unknown function (DUF4083) 6 57 1.5E-12 T 11-10-2018 IPR025143 Protein of unknown function DUF4083 ABE28_002470 c17ad9db27487127b6e7f977728efb30 168 Pfam PF11181 Heat induced stress protein YflT 6 138 2.1E-18 T 11-10-2018 IPR025889 General stress protein 17M-like domain ABE28_013325 ce7b04398d9296b72bbcc6805d1ecfed 194 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 5 188 1.2E-60 T 11-10-2018 IPR018672 Protein of unknown function DUF2140 ABE28_019550 dc778ff696d16876c57f9467ee21c512 70 Pfam PF13129 Protein of unknown function (DUF3953) 26 65 1.6E-6 T 11-10-2018 IPR025018 Protein of unknown function DUF3953 ABE28_020460 e16585c0adb8038cb973884172cd3ece 390 TIGRFAM TIGR04267 mod_HExxH: HEXXH motif domain 212 382 1.7E-23 T 11-10-2018 IPR026337 HEXXH motif domain ABE28_020670 b308430d7624c2fc3c1e30b2b9f56d1e 438 SUPERFAMILY SSF53756 17 436 9.42E-43 T 11-10-2018 ABE28_020670 b308430d7624c2fc3c1e30b2b9f56d1e 438 Pfam PF00534 Glycosyl transferases group 1 254 414 1.2E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 ABE28_020670 b308430d7624c2fc3c1e30b2b9f56d1e 438 Gene3D G3DSA:3.40.50.2000 243 421 9.9E-30 T 11-10-2018 ABE28_009500 d291016be080a7f280731c95ab675ecb 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 105 3.5E-28 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD ABE28_011295 7e011f63be069b8943881009898265d1 128 Pfam PF06103 Bacterial protein of unknown function (DUF948) 11 94 5.7E-18 T 11-10-2018 IPR009293 Uncharacterised protein family UPF0478 ABE28_011295 7e011f63be069b8943881009898265d1 128 SUPERFAMILY SSF58104 13 100 1.2E-5 T 11-10-2018 ABE28_022745 b32def5c972cbe6a33bae773c8c7aaff 141 Pfam PF04892 VanZ like family 13 117 1.7E-10 T 11-10-2018 IPR006976 VanZ-like ABE28_002085 ed9b6063137e4be7fec9c844ea7d3053 218 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 198 1.5E-58 T 11-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein ABE28_015035 bbd7b40d65c133fd8f563a30e6b4f922 117 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 5 117 2.0E-6 T 11-10-2018 ABE28_005365 ff7becfeff046117beb41f9d44bf4fbb 102 Gene3D G3DSA:3.30.1340.10 5 87 3.7E-6 T 11-10-2018 IPR035895 HPr-like superfamily ABE28_001565 f8ef338580e9f416965ca61047b3caf4 241 Pfam PF02517 CAAX protease self-immunity 129 213 2.5E-17 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 ABE28_011985 d5778fdd37ca19c40682004947359742 92 Pfam PF01844 HNH endonuclease 5 45 1.1E-6 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 ABE28_021900 8d8b8d82d5518ad2dfe30ac82c105695 176 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 22 172 2.4E-26 T 11-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like ABE28_021900 8d8b8d82d5518ad2dfe30ac82c105695 176 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 6 173 2.2E-41 T 11-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 ABE28_019405 5cbd8077ed63ff255eeaf6f0dff9bd28 431 Pfam PF00860 Permease family 9 387 2.1E-56 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_019295 ecfc79097d2898d40b02c073819545f4 597 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 416 537 7.5E-29 T 11-10-2018 IPR025299 CstA, C-terminal domain ABE28_019295 ecfc79097d2898d40b02c073819545f4 597 Pfam PF02554 Carbon starvation protein CstA 1 367 6.8E-149 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 ABE28_013735 5a2e1cfa09363d7e6304cdcbed3d08c7 253 Gene3D G3DSA:3.75.10.10 1 253 6.2E-72 T 11-10-2018 ABE28_013735 5a2e1cfa09363d7e6304cdcbed3d08c7 253 SUPERFAMILY SSF55909 2 252 1.0E-55 T 11-10-2018 ABE28_013735 5a2e1cfa09363d7e6304cdcbed3d08c7 253 Pfam PF02274 Amidinotransferase 57 250 1.9E-12 T 11-10-2018 ABE28_016350 30853e157d76354b4674fb38a7884e29 288 Pfam PF02163 Peptidase family M50 33 103 7.4E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ABE28_004425 5ff2cc3550edfbe2e94ea69bfa89a303 328 Pfam PF11927 Protein of unknown function (DUF3445) 31 277 7.3E-44 T 11-10-2018 IPR021848 Protein of unknown function DUF3445 ABE28_016880 fa8d06be7fe32281a7cbb9c28480055e 278 Pfam PF08812 YtxC-like family 59 264 2.7E-45 T 11-10-2018 IPR014199 Sporulation protein YtxC ABE28_003615 285c250838dc866dfbefa6c75063e0ce 88 Pfam PF14043 WVELL protein 3 76 6.6E-37 T 11-10-2018 IPR026952 WVELL protein ABE28_018190 d423fe4ebc4abcd9ba2656fd73ee1b70 253 SUPERFAMILY SSF158560 8 81 1.15E-14 T 11-10-2018 ABE28_022700 adaffd19634db8c9851193e141ab340b 144 Pfam PF14183 YwpF-like protein 2 133 1.2E-39 T 11-10-2018 IPR025573 YwpF-like protein ABE28_019475 239e5f65d7d991a6d6a21a2b15f7a9c3 439 Gene3D G3DSA:1.20.1730.10 3 438 3.8E-20 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_010040 8380227ed569356bac5c748436440367 348 Pfam PF04143 Sulphur transport 18 328 1.4E-99 T 11-10-2018 IPR007272 Sulphur transport domain ABE28_017955 a2b59124632c2c0c603c8f666bf4270d 204 Pfam PF09335 SNARE associated Golgi protein 30 160 2.9E-21 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_008280 3962bf7ad8540bfd0b250eb01abe8706 347 Pfam PF02653 Branched-chain amino acid transport system / permease component 54 329 1.4E-45 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_014280 d2d37561d2c02bc84bbc8b9435c7a58d 276 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 231 1.4E-65 T 11-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 ABE28_017775 7e41326b4ad10eeb731eea25c48d4636 180 Pfam PF02592 Putative vitamin uptake transporter 32 161 8.2E-11 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 ABE28_003110 81bd44a2c2ae7db3ee7abbe03461fd93 301 Pfam PF03837 RecT family 17 187 2.0E-30 T 11-10-2018 IPR018330 RecT family GO:0003677|GO:0006259 ABE28_020545 f67c99ac713f60dd7abd64412e34b309 87 SUPERFAMILY SSF46689 1 85 1.61E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_000105 bc46dec8bf976b5765eba8fc4ea64eef 68 Pfam PF10764 Inhibitor of sigma-G Gin 15 59 9.1E-18 T 11-10-2018 IPR019700 Anti-sigma-G factor Gin ABE28_018590 aa07976535243d0d27bf0917306f9b18 462 Pfam PF02447 GntP family permease 52 453 2.1E-7 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_014580 f692c6da35cc0edfe7cd38255e03a15c 201 Pfam PF14097 Stage V sporulation protein AE1 6 185 1.2E-80 T 11-10-2018 IPR025914 Stage V sporulation protein AE ABE28_003270 4e48728c0143cee13a9e68378213d98f 85 Pfam PF06946 Bacteriophage A118-like holin, Hol118 3 80 6.5E-12 T 11-10-2018 IPR009708 Bacteriophage A118, holin ABE28_021950 f9c048419b37fb4a4e8e7dbb8483cdd7 316 SUPERFAMILY SSF81345 3 312 9.02E-70 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021950 f9c048419b37fb4a4e8e7dbb8483cdd7 316 Gene3D G3DSA:1.10.3470.10 1 313 7.8E-65 T 11-10-2018 IPR037294 ABC transporter, BtuC-like ABE28_021950 f9c048419b37fb4a4e8e7dbb8483cdd7 316 Pfam PF01032 FecCD transport family 10 311 7.5E-68 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 ABE28_023755 af2a07904f577c9cdcbbe0bbb9de677d 233 Pfam PF04474 Protein of unknown function (DUF554) 4 227 7.8E-72 T 11-10-2018 IPR007563 Protein of unknown function DUF554 ABE28_021820 93081d7d9d6f7fba3a710cf1eb50e054 75 Pfam PF14115 YuzL-like protein 34 75 3.0E-13 T 11-10-2018 IPR025625 YuzL-like protein ABE28_004535 97747af09d89c22cbf609e75e93f91a1 137 Pfam PF10722 Putative bacterial sensory transduction regulator 10 132 2.3E-6 T 11-10-2018 IPR019660 Putative sensory transduction regulator YbjN ABE28_016130 23f53aa712dc6310f426904a245b850d 325 Pfam PF08378 Nuclease-related domain 42 154 1.2E-17 T 11-10-2018 IPR011528 Nuclease-related domain, NERD ABE28_006945 99720e3cb57294a5e087db678cfb9a0a 58 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 3.4E-30 T 11-10-2018 IPR018690 Protein of unknown function DUF2187 ABE28_006775 6298bd6e13991ba23dbb6e5244f663ae 459 Pfam PF03553 Na+/H+ antiporter family 162 451 2.6E-49 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 ABE28_006775 6298bd6e13991ba23dbb6e5244f663ae 459 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 12 458 1.8E-123 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 ABE28_001390 2d5c95c58a1f81ece78fcbede6e6e804 93 SUPERFAMILY SSF47598 8 47 9.34E-5 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 ABE28_001390 2d5c95c58a1f81ece78fcbede6e6e804 93 Gene3D G3DSA:1.10.1220.10 1 93 3.6E-38 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 ABE28_015765 b298ab41264be14395481d130cda689c 257 Pfam PF04536 TPM domain 36 159 1.9E-33 T 11-10-2018 IPR007621 TPM domain ABE28_015765 b298ab41264be14395481d130cda689c 257 Gene3D G3DSA:3.10.310.50 19 169 3.3E-45 T 11-10-2018 ABE28_014980 a9e775f06249d38a4989ccbf9f492b8e 202 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 197 1.2E-39 T 11-10-2018 IPR014245 Sporulation stage III, protein AF ABE28_014980 a9e775f06249d38a4989ccbf9f492b8e 202 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 112 1.3E-32 T 11-10-2018 IPR014245 Sporulation stage III, protein AF ABE28_014310 4a54c8d3c8107d148b818250ff4625eb 65 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 36 2.0E-4 T 11-10-2018 IPR020076 Protein of unknown function DUF2768 ABE28_014310 4a54c8d3c8107d148b818250ff4625eb 65 Pfam PF10966 Protein of unknown function (DUF2768) 7 63 8.9E-24 T 11-10-2018 IPR020076 Protein of unknown function DUF2768 ABE28_018570 4b6216a79d1b58afca5cbd364138829d 72 Pfam PF07872 Protein of unknown function (DUF1659) 6 50 4.2E-15 T 11-10-2018 IPR012454 Protein of unknown function DUF1659 ABE28_008630 f1ef85b7c48c78ac14f0e83c0231fbe7 472 Pfam PF03606 C4-dicarboxylate anaerobic carrier 22 465 1.8E-107 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 ABE28_010660 46119df42d33d42092bd69208e43e693 260 Pfam PF02361 Cobalt transport protein 9 225 9.6E-30 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component ABE28_019565 7a703243bc46c4be7b090cf14524a00e 277 Gene3D G3DSA:3.40.50.1820 2 276 2.2E-42 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_019565 7a703243bc46c4be7b090cf14524a00e 277 Pfam PF00561 alpha/beta hydrolase fold 20 151 2.9E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 ABE28_019565 7a703243bc46c4be7b090cf14524a00e 277 SUPERFAMILY SSF53474 2 275 1.18E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold ABE28_017505 59b0d85b01de81186e13146e17f73e1e 136 Pfam PF13273 Protein of unknown function (DUF4064) 2 108 4.2E-12 T 11-10-2018 IPR025273 Domain of unknown function DUF4064 ABE28_013020 7bb5f5022e7a7424e10b96bdb405f677 433 Pfam PF00860 Permease family 22 390 7.1E-38 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_018865 e5050f6a713d5994fcd2413b9c8c3ce9 43 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 7 43 5.7E-19 T 11-10-2018 IPR017526 Small acid-soluble spore protein, SspL ABE28_013345 ff2c54b339ea7b8a486ec9543da034d2 82 Pfam PF10751 Protein of unknown function (DUF2535) 2 80 4.5E-27 T 11-10-2018 IPR019687 Protein of unknown function DUF2535 ABE28_016105 9dac95a88f12dc49fd75809721b75b4e 292 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 276 6.8E-47 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 ABE28_023570 c0193dbae01fdf456c4b0ca7a752526c 194 SUPERFAMILY SSF55729 14 180 2.13E-49 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase ABE28_023570 c0193dbae01fdf456c4b0ca7a752526c 194 SMART SM01006 19 66 5.7E-14 T 11-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain ABE28_023570 c0193dbae01fdf456c4b0ca7a752526c 194 Gene3D G3DSA:3.40.630.30 1 191 5.0E-57 T 11-10-2018 ABE28_023570 c0193dbae01fdf456c4b0ca7a752526c 194 Pfam PF13523 Acetyltransferase (GNAT) domain 24 166 2.4E-50 T 11-10-2018 ABE28_023370 1b82f9a3de8fbae33fb53913ec282adc 64 TIGRFAM TIGR03833 TIGR03833: conserved hypothetical protein 2 63 3.4E-34 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 ABE28_023370 1b82f9a3de8fbae33fb53913ec282adc 64 Pfam PF09962 Uncharacterized conserved protein (DUF2196) 2 62 2.5E-32 T 11-10-2018 IPR019240 Protein of unknown function DUF2196 ABE28_002365 2afe6abaf17ecd709939c3b21f6a67c6 397 Pfam PF12698 ABC-2 family transporter protein 21 389 2.5E-35 T 11-10-2018 ABE28_021310 0d7ccf09488b0ad3e9308ed8fa8254c8 109 Pfam PF14282 FlxA-like protein 5 83 1.8E-10 T 11-10-2018 IPR025577 FlxA-like protein ABE28_004995 a9d49e985039af56dba055fdfd461ba9 465 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 27 432 5.9E-50 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 ABE28_004995 a9d49e985039af56dba055fdfd461ba9 465 Gene3D G3DSA:1.10.4160.10 11 462 5.5E-91 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily ABE28_005490 39df6072ee4d38306f144e1b7f222260 352 Pfam PF10720 Protein of unknown function (DUF2515) 36 345 1.0E-101 T 11-10-2018 IPR019658 Protein of unknown function DUF2515 ABE28_019480 45bc18ad734ab073782f87f5ca73ad03 487 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 12 457 8.6E-121 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 ABE28_019480 45bc18ad734ab073782f87f5ca73ad03 487 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 7 474 45.745 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 ABE28_018850 1a497de5a7ce8abb14054b5538edb94a 151 SUPERFAMILY SSF55961 5 146 3.54E-11 T 11-10-2018 ABE28_018850 1a497de5a7ce8abb14054b5538edb94a 151 Gene3D G3DSA:3.30.530.20 3 150 1.1E-7 T 11-10-2018 IPR023393 START-like domain superfamily ABE28_001235 b2424c96a8a3cb3c4663b1d40c085594 584 Pfam PF03239 Iron permease FTR1 family 328 529 9.1E-23 T 11-10-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0016020|GO:0033573|GO:0034755 ABE28_022310 b6f7bc250e04f999129a0e071d60ac64 76 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 3 72 4.9E-32 T 11-10-2018 IPR019242 Protein of unknown function DUF2198 ABE28_018920 16c53f83f7ef87327a013b656d760492 385 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 2 382 2.2E-133 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ABE28_012190 f157d479354e045a32c37fc1172de847 355 Pfam PF01594 AI-2E family transporter 17 344 1.3E-78 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like ABE28_006280 1b89a8524cbe88e2ab2cee6d6b6cc225 163 Pfam PF07552 Spore Coat Protein X and V domain 105 162 1.7E-20 T 11-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 ABE28_006280 1b89a8524cbe88e2ab2cee6d6b6cc225 163 Pfam PF07552 Spore Coat Protein X and V domain 42 98 1.5E-20 T 11-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 ABE28_022715 766f8fbafdecf06bc763458d0c476ed6 85 Pfam PF11772 DNA-directed RNA polymerase subunit beta 38 83 2.0E-16 T 11-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA ABE28_022715 766f8fbafdecf06bc763458d0c476ed6 85 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 25 79 4.0E-12 T 11-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA ABE28_000015 e2aa273179ec420fd6ea4dff287134da 321 Pfam PF14175 YaaC-like Protein 11 311 2.6E-92 T 11-10-2018 IPR026988 YaaC-like protein ABE28_016815 7d0b3643a170be9be21bcebb027824b7 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 61.837 T 11-10-2018 IPR022822 Lactate utilization protein A GO:0006089 ABE28_016815 7d0b3643a170be9be21bcebb027824b7 238 Pfam PF02754 Cysteine-rich domain 132 215 3.1E-15 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_016815 7d0b3643a170be9be21bcebb027824b7 238 Pfam PF02754 Cysteine-rich domain 3 84 6.0E-18 T 11-10-2018 IPR004017 Cysteine-rich domain ABE28_010380 c5bc1533d6624d8bbe29c2badce4b1b4 209 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 4 189 2.7E-27 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT ABE28_018880 c592bd066e42be9dedacf6b8985cf9ba 186 Pfam PF06338 ComK protein 5 153 1.2E-25 T 11-10-2018 IPR010461 Competence protein ComK GO:0030420 ABE28_005165 654e850907d9daf9fc610ec4f12983b3 203 Pfam PF09335 SNARE associated Golgi protein 29 155 9.1E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_006805 9a17a73160cf78f031380cf4c83f58de 438 Pfam PF12791 Anti-sigma factor N-terminus 7 45 1.4E-8 T 11-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal ABE28_006815 2c3d62dcc891aee602ff38c4718e99f9 450 Pfam PF02386 Cation transport protein 40 428 3.6E-55 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 ABE28_023320 541bbb86a586f18272bfe72a81bb9bf0 138 ProDom PD088182 YYBN 2 134 4.0E-8 T 11-10-2018 IPR020208 Protein of unknown function DUF2712 ABE28_023320 541bbb86a586f18272bfe72a81bb9bf0 138 Pfam PF10916 Protein of unknown function (DUF2712) 42 135 9.8E-17 T 11-10-2018 IPR020208 Protein of unknown function DUF2712 ABE28_013880 393c1ab81503c24bc67d19e94ac5d6f3 61 Pfam PF10782 Zinc-finger 1 58 3.4E-27 T 11-10-2018 IPR019718 Protein of unknown function DUF2602 ABE28_009980 b73ae098369b0ffb04674324d8ae6ac6 133 Pfam PF06271 RDD family 6 125 1.2E-20 T 11-10-2018 IPR010432 RDD ABE28_014510 5834c9dd221d2e593f97b036c5740eee 197 Pfam PF07670 Nucleoside recognition 43 150 1.7E-12 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 ABE28_009710 b4462c1c8bb3808f5e7c8470ff98e155 560 Pfam PF02538 Hydantoinase B/oxoprolinase 2 523 4.5E-161 T 11-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 ABE28_011710 c39ca1865635a248c6b096beabcc89bc 153 SUPERFAMILY SSF109854 41 147 6.04E-6 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes ABE28_017200 dc0d06b31ea790e76c6deeba36496a2b 221 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 185 4.0E-48 T 11-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 ABE28_017940 9e1b47f83f797d1abc43d4d5907bacf4 381 Pfam PF03845 Spore germination protein 5 324 7.4E-77 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_017940 9e1b47f83f797d1abc43d4d5907bacf4 381 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 364 9.4E-69 T 11-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 ABE28_000310 b2f2b74d07eeaa5f844bc32dc338cb06 128 Pfam PF04977 Septum formation initiator 47 122 1.0E-15 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC ABE28_023510 ff040e65d30c1c507073c9e792fc9b21 223 Pfam PF07947 YhhN family 30 204 1.2E-37 T 11-10-2018 IPR012506 YhhN-like GO:0016021 ABE28_023470 46110edc0c538be40f5131123e52f86c 112 Pfam PF04341 Protein of unknown function, DUF485 25 107 1.7E-24 T 11-10-2018 IPR007436 Protein of unknown function DUF485 ABE28_018535 91c39fae6146cdc47217293a825211eb 64 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 21 44 6.7E-11 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_018535 91c39fae6146cdc47217293a825211eb 64 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 20 42 1.7E-10 T 11-10-2018 IPR010070 Sporulation protein YjcZ-like ABE28_016845 24510a7e6e10f9580c3d65a5fd1dd39f 189 Pfam PF09335 SNARE associated Golgi protein 35 148 1.3E-12 T 11-10-2018 IPR032816 SNARE associated Golgi protein ABE28_004815 278d86e4e1902a39789627bba591758d 332 Pfam PF01384 Phosphate transporter family 22 320 7.0E-90 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 ABE28_016565 5f231dc0d4e477fc8c295537d923eabe 123 Pfam PF02656 Domain of unknown function (DUF202) 17 88 1.5E-14 T 11-10-2018 IPR003807 Domain of unknown function DUF202 ABE28_002185 01f5c557a0a42206fe941e9a75d70ace 418 Pfam PF04286 Protein of unknown function (DUF445) 43 413 1.6E-73 T 11-10-2018 IPR007383 Protein of unknown function DUF445 ABE28_002185 01f5c557a0a42206fe941e9a75d70ace 418 SUPERFAMILY SSF48371 78 400 8.96E-7 T 11-10-2018 IPR016024 Armadillo-type fold ABE28_017795 765266608244cb84448378f9188bb8fa 115 Pfam PF14079 Domain of unknown function (DUF4260) 3 115 1.1E-41 T 11-10-2018 IPR025356 Protein of unknown function DUF4260 ABE28_003245 181d982f1e59175ad4d5ce27cca7e78f 778 Pfam PF06605 Prophage endopeptidase tail 44 334 2.7E-14 T 11-10-2018 IPR010572 Prophage tail endopeptidase ABE28_003245 181d982f1e59175ad4d5ce27cca7e78f 778 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 42 345 3.2E-24 T 11-10-2018 IPR007119 Phage minor structural protein, N-terminal domain ABE28_023070 616cdb4cca404252efe092a79508eb3a 221 Pfam PF02163 Peptidase family M50 130 188 4.0E-8 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 ABE28_018505 9b4f1433dfe39ecfcfe8d78c932bbc6e 461 Pfam PF02447 GntP family permease 4 315 3.8E-13 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 ABE28_011840 c07f3c4b1694de7915a20be8655e4e8a 489 Pfam PF00474 Sodium:solute symporter family 35 428 1.5E-23 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 ABE28_011840 c07f3c4b1694de7915a20be8655e4e8a 489 Gene3D G3DSA:1.20.1730.10 21 488 2.5E-33 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily ABE28_013320 dd774130e31005e9db45428c434f8014 247 Pfam PF14344 Domain of unknown function (DUF4397) 58 171 2.8E-20 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 ABE28_013320 dd774130e31005e9db45428c434f8014 247 Pfam PF14344 Domain of unknown function (DUF4397) 157 241 2.1E-7 T 11-10-2018 IPR025510 Domain of unknown function DUF4397 ABE28_017910 20d47dcc11d22b9fda00c87003eb1aa2 323 Pfam PF13536 Putative multidrug resistance efflux transporter 38 305 4.9E-109 T 11-10-2018 IPR032713 Putative multidrug resistance efflux transporter ABE28_008735 0b2ee9790666665fd3ca18d841c02f72 202 Pfam PF03458 UPF0126 domain 92 160 2.0E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ABE28_008735 0b2ee9790666665fd3ca18d841c02f72 202 Pfam PF03458 UPF0126 domain 5 78 6.2E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 ABE28_023480 b85ca085879eb0d3f47c1a0c0f3c406b 148 Pfam PF12821 Threonine/Serine exporter, ThrE 4 131 2.8E-39 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE ABE28_020005 34a3fa5b1e0b55dc3abfe047b463bb34 149 Pfam PF10787 Uncharacterised protein from bacillus cereus group 3 141 4.1E-56 T 11-10-2018 IPR019723 Uncharacterised protein, YfmQ ABE28_006960 1f30f55383d2e5d52e714d8e3be56b0f 119 Pfam PF07238 PilZ domain 24 110 2.8E-9 T 11-10-2018 IPR009875 PilZ domain GO:0035438 ABE28_010410 55f4cfaf90f87df98a1bb7e1be7b51ee 353 Pfam PF03601 Conserved hypothetical protein 698 33 337 1.9E-78 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 ABE28_003895 b95e7a9ebbeedde68ca016d0cbaceda8 138 Pfam PF11457 Protein of unknown function (DUF3021) 1 132 1.4E-23 T 11-10-2018 IPR021560 Protein of unknown function DUF3021 ABE28_019560 b17a1ffb63e67cb13c77d032f53a09b6 185 Gene3D G3DSA:1.10.10.60 6 65 5.5E-9 T 11-10-2018 ABE28_019560 b17a1ffb63e67cb13c77d032f53a09b6 185 SUPERFAMILY SSF46689 7 71 6.67E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 ABE28_015815 bbc33cf8ae59d103a79db0f6ac769bca 346 ProDom PD210561 YWRJ 10 138 1.0E-5 T 11-10-2018 IPR020173 Uncharacterised protein family YwrJ ABE28_006055 1e1f0d436ec2bb6f986cd254d10e2759 59 Pfam PF14168 YjzC-like protein 1 55 1.5E-28 T 11-10-2018 IPR025549 YjzC-like protein ABE28_013055 9880de760ed08bb2db46889f56ad1a27 130 Pfam PF03788 LrgA family 20 111 1.3E-24 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 ABE28_017895 635e5530dcfdb8edc0df745c8751638d 385 Pfam PF00872 Transposase, Mutator family 1 377 1.6E-132 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 ABE28_003395 de71591ff3d68ae8f566d71d9875fceb 194 Pfam PF14172 Domain of unknown function (DUF4309) 54 191 1.4E-25 T 11-10-2018 IPR025453 Protein of unknown function DUF4309 ABE28_015915 654f18c761eb860de22cb3d5776d7424 488 Pfam PF01943 Polysaccharide biosynthesis protein 11 273 4.7E-19 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 ABE28_011305 a9d55eaaa9ccf4f723fe835c9c21d21d 63 Pfam PF13070 Protein of unknown function (DUF3934) 1 43 2.0E-13 T 11-10-2018 IPR025175 Protein of unknown function DUF3934 ABE28_017970 2746ba8dcaaf667d3dc4a3571ef6f27e 223 Pfam PF06161 Protein of unknown function (DUF975) 125 211 1.2E-26 T 11-10-2018 IPR010380 Protein of unknown function DUF975 ABE28_017970 2746ba8dcaaf667d3dc4a3571ef6f27e 223 Pfam PF06161 Protein of unknown function (DUF975) 1 133 7.0E-14 T 11-10-2018 IPR010380 Protein of unknown function DUF975 ABE28_007360 fa96f5589667cbb8aa5ee5e41a47b3b0 80 Pfam PF14003 YlbE-like protein 14 73 3.0E-23 T 11-10-2018 IPR025613 YlbE-like protein ABE28_006240 7bdf1d323e9230c7b677a93d9620f836 121 Pfam PF07098 Protein of unknown function (DUF1360) 13 114 6.3E-30 T 11-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 ABE28_017705 e8210364413f9b9ee4c81c8a6adeaecf 61 Pfam PF10957 Sporulation protein Cse60 1 60 6.5E-32 T 11-10-2018 IPR020296 Sporulation protein Cse60 ABE28_017705 e8210364413f9b9ee4c81c8a6adeaecf 61 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 8.0E-15 T 11-10-2018 IPR020296 Sporulation protein Cse60 ABE28_017785 6e76bfdb6ce6f3b4676edea37d8d5c4b 199 Gene3D G3DSA:2.60.40.3830 31 179 4.1E-12 T 11-10-2018 ABE28_022035 65c1ae3e6b26c85bcf08e49d2fcb9599 158 Pfam PF07849 Protein of unknown function (DUF1641) 117 154 1.7E-15 T 11-10-2018 IPR012440 Protein of unknown function DUF1641 ABE28_005680 738276eeb4b09ab198691356553fe4bf 170 Pfam PF07681 DoxX 15 112 1.1E-10 T 11-10-2018 IPR032808 DoxX family ABE28_009285 ff6e460758f775feca019b0be9088d30 72 Pfam PF11213 Protein of unknown function (DUF3006) 4 70 4.8E-24 T 11-10-2018 IPR021377 Protein of unknown function DUF3006 ABE28_005695 b021b4c2396076145f0b4bf5b351e5a2 62 Pfam PF14147 Sporulation protein YhaL 3 54 1.4E-20 T 11-10-2018 IPR025428 Sporulation protein YhaL ABE28_021470 b6522fb8a45eaed96c22237f5c86211a 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 1.6E-30 T 11-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein ABE28_005060 0f0ded0cf1a1a7d4fb1f9a40b6ce87d3 434 Pfam PF00860 Permease family 9 388 1.6E-54 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 ABE28_018930 94969aefa6361f4d0e69738e2c99c633 374 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 5 371 2.6E-55 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 ABE28_005980 ed157ad814e3db131dabc4be85e2d5d6 82 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 43 60 1.1E-6 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat ABE28_005980 ed157ad814e3db131dabc4be85e2d5d6 82 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 65 79 3.9E-4 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat ABE28_005980 ed157ad814e3db131dabc4be85e2d5d6 82 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 23 40 4.6E-5 T 11-10-2018 IPR019626 Stress-induced protein, KGG, repeat ABE28_015685 3613fa016d4e4748680d02decd530414 70 Pfam PF10750 Protein of unknown function (DUF2536) 1 69 6.8E-31 T 11-10-2018 IPR019686 Protein of unknown function DUF2536 ABE28_014895 ff05548192e02bd7174d2b7bca161a1e 525 Pfam PF03961 Flagellar Assembly Protein A 71 520 2.4E-96 T 11-10-2018 IPR005646 Flagellar assembly protein A ABE28_007465 8c308103522704b19a83a84d9c13a98b 130 Pfam PF11877 Protein of unknown function (DUF3397) 10 119 1.3E-23 T 11-10-2018 IPR024515 Protein of unknown function DUF3397