locus-tag class description DJ92_1 PF00005 ABC transporter DJ92_100 PF00083 Sugar (and other) transporter DJ92_100 PF07690 Major Facilitator Superfamily DJ92_1000 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ92_1000 PF01565 FAD binding domain DJ92_1001 PF03033 Glycosyltransferase family 28 N-terminal domain DJ92_1001 PF04101 Glycosyltransferase family 28 C-terminal domain DJ92_1002 PF01098 Cell cycle protein DJ92_1003 PF02875 Mur ligase family, glutamate ligase domain DJ92_1003 PF08245 Mur ligase middle domain DJ92_1004 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DJ92_1004 PF00953 Glycosyl transferase family 4 DJ92_1005 PF08245 Mur ligase middle domain DJ92_1005 PF02875 Mur ligase family, glutamate ligase domain DJ92_1005 PF01225 Mur ligase family, catalytic domain DJ92_1006 PF03793 PASTA domain DJ92_1006 PF03717 Penicillin-binding Protein dimerisation domain DJ92_1006 PF00905 Penicillin binding protein transpeptidase domain DJ92_1008 PF04977 Septum formation initiator DJ92_1009 PF01795 MraW methylase family DJ92_101 PF02423 Ornithine cyclodeaminase/mu-crystallin family DJ92_1011 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ92_1011 PF02558 Ketopantoate reductase PanE/ApbA DJ92_1012 PF00583 Acetyltransferase (GNAT) family DJ92_1014 PF01783 Ribosomal L32p protein family DJ92_1015 PF02620 Large ribosomal RNA subunit accumulation protein YceD DJ92_1016 PF05636 HIGH Nucleotidyl Transferase DJ92_1017 PF13180 PDZ domain DJ92_1017 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ92_1018 PF01734 Patatin-like phospholipase DJ92_1019 PF01467 Cytidylyltransferase-like DJ92_102 PF13419 Haloacid dehalogenase-like hydrolase DJ92_1020 PF07670 Nucleoside recognition DJ92_1026 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ92_1027 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_1028 PF14003 YlbE-like protein DJ92_1029 PF14071 Putative coat protein DJ92_103 PF11188 Protein of unknown function (DUF2975) DJ92_1030 PF00188 Cysteine-rich secretory protein family DJ92_1030 PF14504 CAP-associated N-terminal DJ92_1031 PF08868 YugN-like family DJ92_1032 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DJ92_1033 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DJ92_1034 PF00510 Cytochrome c oxidase subunit III DJ92_1035 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ92_1036 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ92_1036 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ92_1036 PF00034 Cytochrome c DJ92_1037 PF01040 UbiA prenyltransferase family DJ92_1038 PF02628 Cytochrome oxidase assembly protein DJ92_1039 PF00682 HMGL-like DJ92_1039 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_1039 PF00289 Biotin carboxylase, N-terminal domain DJ92_1039 PF02785 Biotin carboxylase C-terminal domain DJ92_1039 PF00364 Biotin-requiring enzyme DJ92_1039 PF02436 Conserved carboxylase domain DJ92_104 PF13443 Cro/C1-type HTH DNA-binding domain DJ92_1040 PF01098 Cell cycle protein DJ92_1041 PF07408 Protein of unknown function (DUF1507) DJ92_1043 PF13638 PIN domain DJ92_1043 PF02562 PhoH-like protein DJ92_1045 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DJ92_1047 PF14036 YlaH-like protein DJ92_1050 PF00459 Inositol monophosphatase family DJ92_1052 PF06335 Protein of unknown function (DUF1054) DJ92_1053 PF05256 Uncharacterised protein family (UPF0223) DJ92_1054 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ92_1054 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ92_1062 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ92_1064 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_1064 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ92_1065 PF02817 e3 binding domain DJ92_1065 PF00364 Biotin-requiring enzyme DJ92_1065 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ92_1066 PF02780 Transketolase, C-terminal domain DJ92_1066 PF02779 Transketolase, pyrimidine binding domain DJ92_1067 PF00676 Dehydrogenase E1 component DJ92_1068 PF01327 Polypeptide deformylase DJ92_107 PF01385 Probable transposase DJ92_107 PF07282 Putative transposase DNA-binding domain DJ92_107 PF12323 Helix-turn-helix domain DJ92_1071 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ92_1071 PF00753 Metallo-beta-lactamase superfamily DJ92_1071 PF17770 Ribonuclease J C-terminal domain DJ92_1072 PF02254 TrkA-N domain DJ92_1072 PF02080 TrkA-C domain DJ92_1075 PF00578 AhpC/TSA family DJ92_1076 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ92_1076 PF00578 AhpC/TSA family DJ92_1078 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal DJ92_1078 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_1078 PF14602 Hexapeptide repeat of succinyl-transferase DJ92_1079 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_1079 PF03466 LysR substrate binding domain DJ92_1082 PF04308 Ribonuclease H-like DJ92_1083 PF08796 Protein of unknown function (DUF1797) DJ92_1086 PF10388 EAL-domain associated signalling protein domain DJ92_1086 PF00563 EAL domain DJ92_1088 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ92_1088 PF00149 Calcineurin-like phosphoesterase DJ92_1090 PF13089 Polyphosphate kinase N-terminal domain DJ92_1090 PF02503 Polyphosphate kinase middle domain DJ92_1090 PF13090 Polyphosphate kinase C-terminal domain 2 DJ92_1090 PF17941 Polyphosphate kinase C-terminal domain 1 DJ92_1091 PF02541 Ppx/GppA phosphatase family DJ92_1092 PF14177 YkyB-like protein DJ92_1097 PF07690 Major Facilitator Superfamily DJ92_1099 PF08267 Cobalamin-independent synthase, N-terminal domain DJ92_1099 PF01717 Cobalamin-independent synthase, Catalytic domain DJ92_110 PF00892 EamA-like transporter family DJ92_1101 PF14040 Deoxyribonuclease NucA/NucB DJ92_1103 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1103 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1105 PF00155 Aminotransferase class I and II DJ92_1106 PF00356 Bacterial regulatory proteins, lacI family DJ92_1107 PF16657 Maltogenic Amylase, C-terminal domain DJ92_1107 PF00128 Alpha amylase, catalytic domain DJ92_1107 PF02903 Alpha amylase, N-terminal ig-like domain DJ92_1108 PF00128 Alpha amylase, catalytic domain DJ92_1108 PF16657 Maltogenic Amylase, C-terminal domain DJ92_1109 PF00005 ABC transporter DJ92_1109 PF17912 MalK OB fold domain DJ92_1109 PF03459 TOBE domain DJ92_111 PF00392 Bacterial regulatory proteins, gntR family DJ92_111 PF00155 Aminotransferase class I and II DJ92_1118 PF02463 RecF/RecN/SMC N terminal domain DJ92_1119 PF02803 Thiolase, C-terminal domain DJ92_1119 PF00108 Thiolase, N-terminal domain DJ92_112 PF00892 EamA-like transporter family DJ92_1120 PF00293 NUDIX domain DJ92_1128 PF01636 Phosphotransferase enzyme family DJ92_1129 PF00795 Carbon-nitrogen hydrolase DJ92_1130 PF00155 Aminotransferase class I and II DJ92_1133 PF00596 Class II Aldolase and Adducin N-terminal domain DJ92_1134 PF03079 ARD/ARD' family DJ92_1137 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ92_1137 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ92_1138 PF00144 Beta-lactamase DJ92_1139 PF00990 Diguanylate cyclase, GGDEF domain DJ92_1140 PF00881 Nitroreductase family DJ92_1143 PF05524 PEP-utilising enzyme, N-terminal DJ92_1143 PF00391 PEP-utilising enzyme, mobile domain DJ92_1143 PF02896 PEP-utilising enzyme, TIM barrel domain DJ92_1144 PF00381 PTS HPr component phosphorylation site DJ92_1145 PF02378 Phosphotransferase system, EIIC DJ92_1145 PF00367 phosphotransferase system, EIIB DJ92_1145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ92_1146 PF00874 PRD domain DJ92_1146 PF03123 CAT RNA binding domain DJ92_1149 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DJ92_1150 PF01979 Amidohydrolase family DJ92_1155 PF03745 Domain of unknown function (DUF309) DJ92_1156 PF00583 Acetyltransferase (GNAT) family DJ92_1157 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DJ92_1158 PF06207 Protein of unknown function (DUF1002) DJ92_116 PF01925 Sulfite exporter TauE/SafE DJ92_1160 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_1161 PF14097 Stage V sporulation protein AE1 DJ92_1162 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ92_1163 PF07451 Stage V sporulation protein AD (SpoVAD) DJ92_1164 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ92_1165 PF13782 Stage V sporulation protein AB DJ92_1166 PF12164 Stage V sporulation protein AA DJ92_1167 PF04539 Sigma-70 region 3 DJ92_1167 PF04542 Sigma-70 region 2 DJ92_1167 PF04545 Sigma-70, region 4 DJ92_1168 PF13581 Histidine kinase-like ATPase domain DJ92_1169 PF01740 STAS domain DJ92_117 PF00324 Amino acid permease DJ92_1170 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_1170 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_1171 PF00392 Bacterial regulatory proteins, gntR family DJ92_1172 PF00005 ABC transporter DJ92_1176 PF01047 MarR family DJ92_1178 PF00860 Permease family DJ92_1179 PF01544 CorA-like Mg2+ transporter protein DJ92_1180 PF00591 Glycosyl transferase family, a/b domain DJ92_1180 PF02885 Glycosyl transferase family, helical bundle domain DJ92_1180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ92_1181 PF01048 Phosphorylase superfamily DJ92_1182 PF01676 Metalloenzyme superfamily DJ92_1183 PF13115 YtkA-like DJ92_1184 PF00589 Phage integrase family DJ92_1184 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_1185 PF14004 Protein of unknown function (DUF4227) DJ92_1186 PF01475 Ferric uptake regulator family DJ92_1187 PF01944 Stage II sporulation protein M DJ92_1189 PF00293 NUDIX domain DJ92_1190 PF13072 Mother cell inhibitor of FtsZ DJ92_1191 PF00248 Aldo/keto reductase family DJ92_1192 PF00248 Aldo/keto reductase family DJ92_1194 PF13673 Acetyltransferase (GNAT) domain DJ92_1194 PF04229 GrpB protein DJ92_1196 PF00149 Calcineurin-like phosphoesterase DJ92_1196 PF00746 LPXTG cell wall anchor motif DJ92_1196 PF00565 Staphylococcal nuclease homologue DJ92_1196 PF02872 5'-nucleotidase, C-terminal domain DJ92_1197 PF02915 Rubrerythrin DJ92_1199 PF12146 Serine aminopeptidase, S33 DJ92_120 PF00857 Isochorismatase family DJ92_1200 PF13726 Na+-H+ antiporter family DJ92_1200 PF03553 Na+/H+ antiporter family DJ92_1201 PF00356 Bacterial regulatory proteins, lacI family DJ92_1202 PF00583 Acetyltransferase (GNAT) family DJ92_1203 PF12146 Serine aminopeptidase, S33 DJ92_1204 PF10827 Protein of unknown function (DUF2552) DJ92_1206 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ92_1207 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DJ92_1208 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ92_1208 PF01872 RibD C-terminal domain DJ92_1209 PF00677 Lumazine binding domain DJ92_121 PF01066 CDP-alcohol phosphatidyltransferase DJ92_1211 PF00885 6,7-dimethyl-8-ribityllumazine synthase DJ92_1213 PF05199 GMC oxidoreductase DJ92_1213 PF00732 GMC oxidoreductase DJ92_1214 PF06968 Biotin and Thiamin Synthesis associated domain DJ92_1214 PF04055 Radical SAM superfamily DJ92_1215 PF13847 Methyltransferase domain DJ92_1216 PF12697 Alpha/beta hydrolase family DJ92_1216 PF08241 Methyltransferase domain DJ92_1217 PF00155 Aminotransferase class I and II DJ92_1219 PF00202 Aminotransferase class-III DJ92_1222 PF02872 5'-nucleotidase, C-terminal domain DJ92_1222 PF00149 Calcineurin-like phosphoesterase DJ92_1227 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ92_1227 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ92_1228 PF00202 Aminotransferase class-III DJ92_1229 PF00696 Amino acid kinase family DJ92_123 PF00144 Beta-lactamase DJ92_1230 PF01960 ArgJ family DJ92_1233 PF00106 short chain dehydrogenase DJ92_1234 PF00753 Metallo-beta-lactamase superfamily DJ92_1235 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ92_1235 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ92_1236 PF03313 Serine dehydratase alpha chain DJ92_1237 PF01842 ACT domain DJ92_1237 PF03315 Serine dehydratase beta chain DJ92_1239 PF12706 Beta-lactamase superfamily domain DJ92_1239 PF00753 Metallo-beta-lactamase superfamily DJ92_124 PF00144 Beta-lactamase DJ92_1241 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ92_1242 PF11799 impB/mucB/samB family C-terminal domain DJ92_1242 PF11798 IMS family HHH motif DJ92_1242 PF00817 impB/mucB/samB family DJ92_1244 PF07687 Peptidase dimerisation domain DJ92_1244 PF01546 Peptidase family M20/M25/M40 DJ92_1245 PF13302 Acetyltransferase (GNAT) domain DJ92_1248 PF03734 L,D-transpeptidase catalytic domain DJ92_1249 PF11728 Putative aromatic acid exporter C-terminal domain DJ92_1249 PF06081 Aromatic acid exporter family member 1 DJ92_1251 PF00005 ABC transporter DJ92_1252 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1253 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ92_1254 PF06491 Disulphide isomerase DJ92_1255 PF11208 Protein of unknown function (DUF2992) DJ92_1256 PF00293 NUDIX domain DJ92_1256 PF09297 NADH pyrophosphatase zinc ribbon domain DJ92_1257 PF04239 Protein of unknown function (DUF421) DJ92_1258 PF01098 Cell cycle protein DJ92_1259 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ92_1259 PF02817 e3 binding domain DJ92_1259 PF00364 Biotin-requiring enzyme DJ92_1260 PF02779 Transketolase, pyrimidine binding domain DJ92_1260 PF02780 Transketolase, C-terminal domain DJ92_1261 PF00676 Dehydrogenase E1 component DJ92_1262 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ92_1262 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_1264 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_1264 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ92_1265 PF01515 Phosphate acetyl/butaryl transferase DJ92_1266 PF00989 PAS fold DJ92_1266 PF02954 Bacterial regulatory protein, Fis family DJ92_1266 PF00158 Sigma-54 interaction domain DJ92_1267 PF11118 Protein of unknown function (DUF2627) DJ92_1268 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ92_1269 PF14174 YycC-like protein DJ92_127 PF01965 DJ-1/PfpI family DJ92_1270 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_1270 PF17874 MalT-like TPR region DJ92_1273 PF00072 Response regulator receiver domain DJ92_1273 PF08769 Sporulation initiation factor Spo0A C terminal DJ92_1274 PF17820 PDZ domain DJ92_1274 PF05580 SpoIVB peptidase S55 DJ92_1275 PF13476 AAA domain DJ92_1276 PF01316 Arginine repressor, DNA binding domain DJ92_1276 PF02863 Arginine repressor, C-terminal domain DJ92_1277 PF01728 FtsJ-like methyltransferase DJ92_1277 PF01479 S4 domain DJ92_1278 PF02780 Transketolase, C-terminal domain DJ92_1278 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DJ92_1278 PF02779 Transketolase, pyrimidine binding domain DJ92_1279 PF00348 Polyprenyl synthetase DJ92_1281 PF02601 Exonuclease VII, large subunit DJ92_1281 PF13742 OB-fold nucleic acid binding domain DJ92_1282 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DJ92_1282 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DJ92_1283 PF01029 NusB family DJ92_1284 PF03780 Asp23 family, cell envelope-related function DJ92_1285 PF02785 Biotin carboxylase C-terminal domain DJ92_1285 PF00289 Biotin carboxylase, N-terminal domain DJ92_1285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_1286 PF00364 Biotin-requiring enzyme DJ92_1288 PF12685 SpoIIIAH-like protein DJ92_1291 PF09581 Stage III sporulation protein AF (Spore_III_AF) DJ92_1292 PF09546 Stage III sporulation protein AE (spore_III_AE) DJ92_1293 PF06686 Stage III sporulation protein AC/AD protein family DJ92_1294 PF06686 Stage III sporulation protein AC/AD protein family DJ92_1295 PF09548 Stage III sporulation protein AB (spore_III_AB) DJ92_1300 PF01132 Elongation factor P (EF-P) OB domain DJ92_1300 PF09285 Elongation factor P, C-terminal DJ92_1300 PF08207 Elongation factor P (EF-P) KOW-like domain DJ92_1301 PF01321 Creatinase/Prolidase N-terminal domain DJ92_1301 PF00557 Metallopeptidase family M24 DJ92_1302 PF01220 Dehydroquinase class II DJ92_1303 PF11085 Conserved membrane protein YqhR DJ92_1304 PF07136 Protein of unknown function (DUF1385) DJ92_1306 PF13419 Haloacid dehalogenase-like hydrolase DJ92_1307 PF02742 Iron dependent repressor, metal binding and dimerisation domain DJ92_1307 PF01325 Iron dependent repressor, N-terminal DNA binding domain DJ92_1313 PF03099 Biotin/lipoate A/B protein ligase family DJ92_1314 PF00581 Rhodanese-like domain DJ92_1316 PF00356 Bacterial regulatory proteins, lacI family DJ92_1316 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ92_1318 PF00893 Small Multidrug Resistance protein DJ92_1319 PF00893 Small Multidrug Resistance protein DJ92_1323 PF00005 ABC transporter DJ92_1328 PF02347 Glycine cleavage system P-protein DJ92_1329 PF08669 Glycine cleavage T-protein C-terminal barrel domain DJ92_1329 PF01571 Aminomethyltransferase folate-binding domain DJ92_1330 PF00271 Helicase conserved C-terminal domain DJ92_1330 PF00176 SNF2 family N-terminal domain DJ92_1331 PF11079 Bacterial protein YqhG of unknown function DJ92_1334 PF00578 AhpC/TSA family DJ92_1335 PF10417 C-terminal domain of 1-Cys peroxiredoxin DJ92_1335 PF00578 AhpC/TSA family DJ92_1337 PF14038 YqzE-like protein DJ92_134 PF02146 Sir2 family DJ92_1342 PF07963 Prokaryotic N-terminal methylation motif DJ92_1343 PF00482 Type II secretion system (T2SS), protein F DJ92_1344 PF00437 Type II/IV secretion system protein DJ92_1346 PF11117 Protein of unknown function (DUF2626) DJ92_1347 PF00375 Sodium:dicarboxylate symporter family DJ92_1354 PF01966 HD domain DJ92_1357 PF04101 Glycosyltransferase family 28 C-terminal domain DJ92_1357 PF03033 Glycosyltransferase family 28 N-terminal domain DJ92_1358 PF00809 Pterin binding enzyme DJ92_1358 PF02574 Homocysteine S-methyltransferase DJ92_1358 PF02965 Vitamin B12 dependent methionine synthase, activation domain DJ92_1358 PF02310 B12 binding domain DJ92_1358 PF02607 B12 binding domain DJ92_1359 PF02574 Homocysteine S-methyltransferase DJ92_1359 PF02219 Methylenetetrahydrofolate reductase DJ92_1360 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ92_1361 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ92_1362 PF01636 Phosphotransferase enzyme family DJ92_1363 PF01022 Bacterial regulatory protein, arsR family DJ92_1365 PF00753 Metallo-beta-lactamase superfamily DJ92_1366 PF10958 Protein of unknown function (DUF2759) DJ92_1367 PF00480 ROK family DJ92_1368 PF06014 Bacterial protein of unknown function (DUF910) DJ92_1369 PF01812 5-formyltetrahydrofolate cyclo-ligase family DJ92_1370 PF00471 Ribosomal protein L33 DJ92_1371 PF00483 Nucleotidyl transferase DJ92_1372 PF01895 PhoU domain DJ92_1373 PF00005 ABC transporter DJ92_1374 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1375 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1376 PF12849 PBP superfamily domain DJ92_1378 PF07690 Major Facilitator Superfamily DJ92_1379 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ92_1379 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ92_138 PF03746 LamB/YcsF family DJ92_1383 PF04551 GcpE protein DJ92_1384 PF01475 Ferric uptake regulator family DJ92_1385 PF00950 ABC 3 transport family DJ92_1386 PF00005 ABC transporter DJ92_1387 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_1387 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_1389 PF01261 Xylose isomerase-like TIM barrel DJ92_139 PF02626 Carboxyltransferase domain, subdomain A and B DJ92_1390 PF00271 Helicase conserved C-terminal domain DJ92_1390 PF00270 DEAD/DEAH box helicase DJ92_1392 PF02401 LytB protein DJ92_1393 PF01784 NIF3 (NGG1p interacting factor 3) DJ92_1394 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DJ92_1395 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ92_1396 PF04539 Sigma-70 region 3 DJ92_1396 PF04545 Sigma-70, region 4 DJ92_1396 PF04542 Sigma-70 region 2 DJ92_1396 PF00140 Sigma-70 factor, region 1.2 DJ92_1396 PF03979 Sigma-70 factor, region 1.1 DJ92_1397 PF08275 DNA primase catalytic core, N-terminal domain DJ92_1397 PF10410 DnaB-helicase binding domain of primase DJ92_1397 PF01807 CHC2 zinc finger DJ92_1398 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ92_1399 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ92_14 PF02522 Aminoglycoside 3-N-acetyltransferase DJ92_140 PF02682 Carboxyltransferase domain, subdomain C and D DJ92_1400 PF03618 Kinase/pyrophosphorylase DJ92_1401 PF00571 CBS domain DJ92_1401 PF08279 HTH domain DJ92_1402 PF11967 Recombination protein O N terminal DJ92_1402 PF02565 Recombination protein O C terminal DJ92_1404 PF01926 50S ribosome-binding GTPase DJ92_1404 PF07650 KH domain DJ92_1405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ92_1406 PF01219 Prokaryotic diacylglycerol kinase DJ92_1407 PF02130 Uncharacterized protein family UPF0054 DJ92_1408 PF07697 7TM-HD extracellular DJ92_1408 PF07698 7TM receptor with intracellular HD hydrolase DJ92_1408 PF01966 HD domain DJ92_1409 PF02562 PhoH-like protein DJ92_141 PF01614 Bacterial transcriptional regulator DJ92_141 PF09339 IclR helix-turn-helix domain DJ92_1410 PF06898 Putative stage IV sporulation protein YqfD DJ92_1411 PF07873 YabP family DJ92_1412 PF09424 Yqey-like protein DJ92_1413 PF01165 Ribosomal protein S21 DJ92_1414 PF01791 DeoC/LacD family aldolase DJ92_1415 PF04055 Radical SAM superfamily DJ92_1415 PF01938 TRAM domain DJ92_1415 PF00919 Uncharacterized protein family UPF0004 DJ92_1416 PF04452 RNA methyltransferase DJ92_1419 PF00012 Hsp70 protein DJ92_142 PF10502 Signal peptidase, peptidase S26 DJ92_1420 PF01025 GrpE DJ92_1421 PF01628 HrcA protein C terminal domain DJ92_1422 PF04055 Radical SAM superfamily DJ92_1422 PF06969 HemN C-terminal domain DJ92_1423 PF01638 HxlR-like helix-turn-helix DJ92_1424 PF06421 GTP-binding protein LepA C-terminus DJ92_1424 PF03144 Elongation factor Tu domain 2 DJ92_1424 PF00679 Elongation factor G C-terminus DJ92_1424 PF00009 Elongation factor Tu GTP binding domain DJ92_1426 PF03418 Germination protease DJ92_1427 PF01649 Ribosomal protein S20 DJ92_1428 PF06144 DNA polymerase III, delta subunit DJ92_1429 PF14141 YqzM-like protein DJ92_143 PF03932 CutC family DJ92_1430 PF00753 Metallo-beta-lactamase superfamily DJ92_1430 PF13567 Domain of unknown function (DUF4131) DJ92_1430 PF03772 Competence protein DJ92_1431 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ92_1432 PF10531 SLBB domain DJ92_1433 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ92_1433 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ92_1434 PF13649 Methyltransferase domain DJ92_1436 PF01966 HD domain DJ92_1437 PF01467 Cytidylyltransferase-like DJ92_1438 PF01985 CRS1 / YhbY (CRM) domain DJ92_1439 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DJ92_1439 PF08501 Shikimate dehydrogenase substrate binding domain DJ92_1439 PF01488 Shikimate / quinate 5-dehydrogenase DJ92_144 PF01551 Peptidase family M23 DJ92_1440 PF01926 50S ribosome-binding GTPase DJ92_1442 PF02666 Phosphatidylserine decarboxylase DJ92_1443 PF04545 Sigma-70, region 4 DJ92_1443 PF04542 Sigma-70 region 2 DJ92_1444 PF00471 Ribosomal protein L33 DJ92_1445 PF04607 Region found in RelA / SpoT proteins DJ92_1447 PF00245 Alkaline phosphatase DJ92_1449 PF00561 alpha/beta hydrolase fold DJ92_1449 PF08386 TAP-like protein DJ92_1455 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DJ92_1457 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_1458 PF07681 DoxX DJ92_146 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1463 PF00356 Bacterial regulatory proteins, lacI family DJ92_1466 PF00171 Aldehyde dehydrogenase family DJ92_1466 PF00465 Iron-containing alcohol dehydrogenase DJ92_1468 PF13276 HTH-like domain DJ92_1468 PF13333 Integrase core domain DJ92_1468 PF00665 Integrase core domain DJ92_1469 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ92_147 PF00005 ABC transporter DJ92_147 PF09383 NIL domain DJ92_1470 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_1471 PF01048 Phosphorylase superfamily DJ92_1473 PF10750 Protein of unknown function (DUF2536) DJ92_1475 PF00905 Penicillin binding protein transpeptidase domain DJ92_1475 PF03717 Penicillin-binding Protein dimerisation domain DJ92_1477 PF01272 Transcription elongation factor, GreA/GreB, C-term DJ92_1477 PF03449 Transcription elongation factor, N-terminal DJ92_1479 PF00485 Phosphoribulokinase / Uridine kinase family DJ92_148 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_148 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_148 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DJ92_1483 PF02618 YceG-like family DJ92_1484 PF06949 Protein of unknown function (DUF1292) DJ92_1485 PF03652 Holliday junction resolvase DJ92_1486 PF06135 IreB regulatory phosphoprotein DJ92_1487 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_1487 PF01411 tRNA synthetases class II (A) DJ92_1487 PF02272 DHHA1 domain DJ92_1488 PF01594 AI-2E family transporter DJ92_149 PF03180 NLPA lipoprotein DJ92_1492 PF14490 Helix-hairpin-helix containing domain DJ92_1492 PF13538 UvrD-like helicase C-terminal domain DJ92_1492 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DJ92_1495 PF00266 Aminotransferase class-V DJ92_1496 PF02082 Transcriptional regulator DJ92_1497 PF12002 MgsA AAA+ ATPase C terminal DJ92_1497 PF05496 Holliday junction DNA helicase RuvB P-loop domain DJ92_1497 PF16193 AAA C-terminal domain DJ92_1499 PF00899 ThiF family DJ92_1500 PF01336 OB-fold nucleic acid binding domain DJ92_1500 PF00152 tRNA synthetases class II (D, K and N) DJ92_1500 PF02938 GAD domain DJ92_1501 PF03129 Anticodon binding domain DJ92_1501 PF13393 Histidyl-tRNA synthetase DJ92_1505 PF02580 D-Tyr-tRNA(Tyr) deacylase DJ92_1506 PF04607 Region found in RelA / SpoT proteins DJ92_1506 PF13291 ACT domain DJ92_1506 PF02824 TGS domain DJ92_1507 PF00156 Phosphoribosyl transferase domain DJ92_1508 PF01368 DHH family DJ92_1508 PF17768 RecJ OB domain DJ92_1508 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DJ92_1508 PF02272 DHHA1 domain DJ92_1509 PF16916 Dimerisation domain of Zinc Transporter DJ92_1509 PF01545 Cation efflux family DJ92_1510 PF07549 SecD/SecF GG Motif DJ92_1510 PF02355 Protein export membrane protein DJ92_1511 PF13797 Post-transcriptional regulator DJ92_1512 PF14667 Polysaccharide biosynthesis C-terminal domain DJ92_1512 PF01943 Polysaccharide biosynthesis protein DJ92_1513 PF04239 Protein of unknown function (DUF421) DJ92_1515 PF02699 Preprotein translocase subunit DJ92_1516 PF01702 Queuine tRNA-ribosyltransferase DJ92_1517 PF02547 Queuosine biosynthesis protein DJ92_1518 PF11146 Protein of unknown function (DUF2905) DJ92_152 PF13302 Acetyltransferase (GNAT) domain DJ92_1520 PF07499 RuvA, C-terminal domain DJ92_1520 PF01330 RuvA N terminal domain DJ92_1521 PF01497 Periplasmic binding protein DJ92_1525 PF01476 LysM domain DJ92_1526 PF02445 Quinolinate synthetase A protein DJ92_1527 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DJ92_1527 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DJ92_1528 PF02910 Fumarate reductase flavoprotein C-term DJ92_1528 PF00890 FAD binding domain DJ92_1529 PF00266 Aminotransferase class-V DJ92_1530 PF08279 HTH domain DJ92_1530 PF02829 3H domain DJ92_1531 PF03475 3-alpha domain DJ92_1531 PF03473 MOSC domain DJ92_1532 PF00800 Prephenate dehydratase DJ92_1532 PF01842 ACT domain DJ92_1533 PF02687 FtsX-like permease family DJ92_1534 PF02687 FtsX-like permease family DJ92_1535 PF00005 ABC transporter DJ92_1536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1537 PF00486 Transcriptional regulatory protein, C terminal DJ92_1537 PF00072 Response regulator receiver domain DJ92_1538 PF09269 Domain of unknown function (DUF1967) DJ92_1538 PF01018 GTP1/OBG DJ92_1538 PF01926 50S ribosome-binding GTPase DJ92_1539 PF14682 Sporulation initiation phospho-transferase B, C-terminal DJ92_1539 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ92_1540 PF01016 Ribosomal L27 protein DJ92_1541 PF04327 Cysteine protease Prp DJ92_1542 PF00829 Ribosomal prokaryotic L21 protein DJ92_1543 PF10150 Ribonuclease E/G family DJ92_1543 PF00575 S1 RNA binding domain DJ92_1544 PF02163 Peptidase family M50 DJ92_1545 PF01551 Peptidase family M23 DJ92_1546 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DJ92_1547 PF03775 Septum formation inhibitor MinC, C-terminal domain DJ92_1549 PF04085 rod shape-determining protein MreC DJ92_1552 PF02545 Maf-like protein DJ92_1554 PF02875 Mur ligase family, glutamate ligase domain DJ92_1554 PF08245 Mur ligase middle domain DJ92_1555 PF08264 Anticodon-binding domain of tRNA DJ92_1555 PF00133 tRNA synthetases class I (I, L, M and V) DJ92_1555 PF10458 Valyl tRNA synthetase tRNA binding arm DJ92_1557 PF01476 LysM domain DJ92_1558 PF00202 Aminotransferase class-III DJ92_1559 PF00490 Delta-aminolevulinic acid dehydratase DJ92_1560 PF02602 Uroporphyrinogen-III synthase HemD DJ92_1562 PF01578 Cytochrome C assembly protein DJ92_1564 PF01047 MarR family DJ92_1565 PF02566 OsmC-like protein DJ92_1566 PF01926 50S ribosome-binding GTPase DJ92_1567 PF02190 ATP-dependent protease La (LON) substrate-binding domain DJ92_1567 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_1567 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ92_1568 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_1568 PF05362 Lon protease (S16) C-terminal proteolytic domain DJ92_1569 PF06689 ClpX C4-type zinc finger DJ92_1569 PF10431 C-terminal, D2-small domain, of ClpB protein DJ92_1569 PF07724 AAA domain (Cdc48 subfamily) DJ92_157 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_1570 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DJ92_1570 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ92_1570 PF05697 Bacterial trigger factor protein (TF) DJ92_1574 PF11724 YvbH-like oligomerisation region DJ92_1574 PF08000 Bacterial PH domain DJ92_1577 PF12850 Calcineurin-like phosphoesterase superfamily domain DJ92_1578 PF01725 Ham1 family DJ92_1579 PF03725 3' exoribonuclease family, domain 2 DJ92_1579 PF01138 3' exoribonuclease family, domain 1 DJ92_1580 PF10646 Sporulation and spore germination DJ92_1581 PF01177 Asp/Glu/Hydantoin racemase DJ92_1582 PF00196 Bacterial regulatory proteins, luxR family DJ92_1583 PF13520 Amino acid permease DJ92_1584 PF04024 PspC domain DJ92_1586 PF16353 Domain of unknown function(DUF4981) DJ92_1586 PF02837 Glycosyl hydrolases family 2, sugar binding domain DJ92_1586 PF02836 Glycosyl hydrolases family 2, TIM barrel domain DJ92_1586 PF02929 Beta galactosidase small chain DJ92_1586 PF00703 Glycosyl hydrolases family 2 DJ92_1587 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1588 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_159 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_1590 PF00072 Response regulator receiver domain DJ92_1590 PF12833 Helix-turn-helix domain DJ92_1591 PF06580 Histidine kinase DJ92_1591 PF02743 Cache domain DJ92_1591 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1591 PF00672 HAMP domain DJ92_1592 PF07883 Cupin domain DJ92_1592 PF01381 Helix-turn-helix DJ92_1593 PF13536 Putative multidrug resistance efflux transporter DJ92_1594 PF00230 Major intrinsic protein DJ92_1595 PF02082 Transcriptional regulator DJ92_1597 PF13732 Domain of unknown function (DUF4162) DJ92_1597 PF00005 ABC transporter DJ92_1598 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DJ92_1599 PF02557 D-alanyl-D-alanine carboxypeptidase DJ92_1601 PF13085 2Fe-2S iron-sulfur cluster binding domain DJ92_1601 PF13183 4Fe-4S dicluster domain DJ92_1602 PF00890 FAD binding domain DJ92_1602 PF02910 Fumarate reductase flavoprotein C-term DJ92_1603 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DJ92_1604 PF10702 Protein of unknown function (DUF2507) DJ92_1605 PF01541 GIY-YIG catalytic domain DJ92_1605 PF02151 UvrB/uvrC motif DJ92_1605 PF08459 UvrC Helix-hairpin-helix N-terminal DJ92_1609 PF00535 Glycosyl transferase family 2 DJ92_1612 PF01370 NAD dependent epimerase/dehydratase family DJ92_1614 PF00085 Thioredoxin DJ92_1615 PF00766 Electron transfer flavoprotein FAD-binding domain DJ92_1615 PF01012 Electron transfer flavoprotein domain DJ92_1616 PF01012 Electron transfer flavoprotein domain DJ92_1617 PF00378 Enoyl-CoA hydratase/isomerase DJ92_1618 PF08359 YsiA-like protein, C-terminal region DJ92_1618 PF00440 Bacterial regulatory proteins, tetR family DJ92_1619 PF00501 AMP-binding enzyme DJ92_1619 PF13193 AMP-binding enzyme C-terminal domain DJ92_1621 PF05163 DinB family DJ92_1627 PF00005 ABC transporter DJ92_1628 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1628 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1629 PF00486 Transcriptional regulatory protein, C terminal DJ92_1629 PF00072 Response regulator receiver domain DJ92_163 PF00005 ABC transporter DJ92_1631 PF09962 Uncharacterized conserved protein (DUF2196) DJ92_1632 PF17785 PUA-like domain DJ92_1632 PF10672 S-adenosylmethionine-dependent methyltransferase DJ92_1634 PF05525 Branched-chain amino acid transport protein DJ92_1635 PF01479 S4 domain DJ92_1635 PF00849 RNA pseudouridylate synthase DJ92_1636 PF00488 MutS domain V DJ92_1636 PF01713 Smr domain DJ92_1637 PF14716 Helix-hairpin-helix domain DJ92_1637 PF14791 DNA polymerase beta thumb DJ92_1637 PF02811 PHP domain DJ92_1638 PF02674 Colicin V production protein DJ92_164 PF02687 FtsX-like permease family DJ92_1642 PF00106 short chain dehydrogenase DJ92_1643 PF00152 tRNA synthetases class II (D, K and N) DJ92_1643 PF01336 OB-fold nucleic acid binding domain DJ92_1645 PF03483 B3/4 domain DJ92_1645 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DJ92_1645 PF03484 tRNA synthetase B5 domain DJ92_1645 PF03147 Ferredoxin-fold anticodon binding domain DJ92_1645 PF01588 Putative tRNA binding domain DJ92_1646 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DJ92_1646 PF01409 tRNA synthetases class II core domain (F) DJ92_1647 PF00588 SpoU rRNA Methylase family DJ92_1647 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ92_1648 PF14098 Small, acid-soluble spore protein I DJ92_1649 PF01966 HD domain DJ92_165 PF00072 Response regulator receiver domain DJ92_165 PF04397 LytTr DNA-binding domain DJ92_1652 PF07690 Major Facilitator Superfamily DJ92_1654 PF16859 Tetracyclin repressor-like, C-terminal domain DJ92_1654 PF00440 Bacterial regulatory proteins, tetR family DJ92_1655 PF10903 Protein of unknown function (DUF2691) DJ92_1656 PF05343 M42 glutamyl aminopeptidase DJ92_1658 PF00107 Zinc-binding dehydrogenase DJ92_1658 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_1659 PF00453 Ribosomal protein L20 DJ92_1660 PF01632 Ribosomal protein L35 DJ92_1661 PF05198 Translation initiation factor IF-3, N-terminal domain DJ92_1661 PF00707 Translation initiation factor IF-3, C-terminal domain DJ92_1662 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_1662 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_1662 PF03129 Anticodon binding domain DJ92_1662 PF02824 TGS domain DJ92_1663 PF08812 YtxC-like family DJ92_1664 PF07319 Primosomal protein DnaI N-terminus DJ92_1664 PF01695 IstB-like ATP binding protein DJ92_1665 PF07261 Replication initiation and membrane attachment DJ92_1666 PF03477 ATP cone domain DJ92_1667 PF02675 S-adenosylmethionine decarboxylase DJ92_1668 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ92_1668 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ92_1669 PF01121 Dephospho-CoA kinase DJ92_167 PF02687 FtsX-like permease family DJ92_1670 PF02659 Putative manganese efflux pump DJ92_1671 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DJ92_1671 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ92_1671 PF06827 Zinc finger found in FPG and IleRS DJ92_1672 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ92_1672 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ92_1672 PF00476 DNA polymerase family A DJ92_1673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1673 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1673 PF00989 PAS fold DJ92_1673 PF16736 Single Cache-like DJ92_1674 PF00072 Response regulator receiver domain DJ92_1674 PF00486 Transcriptional regulatory protein, C terminal DJ92_1675 PF02694 Uncharacterised BCR, YnfA/UPF0060 family DJ92_1678 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ92_1678 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ92_1679 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ92_168 PF00005 ABC transporter DJ92_1680 PF00285 Citrate synthase, C-terminal domain DJ92_1681 PF04284 Protein of unknown function (DUF441) DJ92_1682 PF01594 AI-2E family transporter DJ92_1683 PF04186 FxsA cytoplasmic membrane protein DJ92_1684 PF00391 PEP-utilising enzyme, mobile domain DJ92_1684 PF02887 Pyruvate kinase, alpha/beta domain DJ92_1684 PF00224 Pyruvate kinase, barrel domain DJ92_1685 PF00365 Phosphofructokinase DJ92_1686 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DJ92_1687 PF01039 Carboxyl transferase domain DJ92_1687 PF17848 Acetyl-coA carboxylase zinc finger domain DJ92_1688 PF00392 Bacterial regulatory proteins, gntR family DJ92_1689 PF00390 Malic enzyme, N-terminal domain DJ92_1689 PF03949 Malic enzyme, NAD binding domain DJ92_169 PF13610 DDE domain DJ92_1690 PF02811 PHP domain DJ92_1690 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ92_1690 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ92_1690 PF01336 OB-fold nucleic acid binding domain DJ92_1690 PF14579 Helix-hairpin-helix motif DJ92_1691 PF14034 Sporulation protein YtrH DJ92_1693 PF02272 DHHA1 domain DJ92_1693 PF01368 DHH family DJ92_1696 PF07085 DRTGG domain DJ92_1696 PF00571 CBS domain DJ92_1696 PF03061 Thioesterase superfamily DJ92_1696 PF00392 Bacterial regulatory proteins, gntR family DJ92_1699 PF01321 Creatinase/Prolidase N-terminal domain DJ92_1699 PF00557 Metallopeptidase family M24 DJ92_1707 PF07883 Cupin domain DJ92_171 PF12697 Alpha/beta hydrolase family DJ92_1710 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ92_1710 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ92_1712 PF00582 Universal stress protein family DJ92_1715 PF03831 PhnA domain DJ92_1715 PF08274 PhnA Zinc-Ribbon DJ92_1717 PF00144 Beta-lactamase DJ92_1718 PF14698 Argininosuccinate lyase C-terminal DJ92_1718 PF00206 Lyase DJ92_172 PF00512 His Kinase A (phospho-acceptor) domain DJ92_172 PF00672 HAMP domain DJ92_172 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1722 PF03994 Domain of Unknown Function (DUF350) DJ92_1726 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_1726 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_1729 PF00871 Acetokinase family DJ92_173 PF00486 Transcriptional regulatory protein, C terminal DJ92_173 PF00072 Response regulator receiver domain DJ92_1731 PF02384 N-6 DNA Methylase DJ92_1732 PF08534 Redoxin DJ92_1733 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ92_1735 PF01513 ATP-NAD kinase DJ92_1736 PF07969 Amidohydrolase family DJ92_1738 PF00501 AMP-binding enzyme DJ92_1738 PF13193 AMP-binding enzyme C-terminal domain DJ92_1739 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_174 PF03781 Sulfatase-modifying factor enzyme 1 DJ92_1740 PF02568 Thiamine biosynthesis protein (ThiI) DJ92_1740 PF02926 THUMP domain DJ92_1741 PF00266 Aminotransferase class-V DJ92_1742 PF06160 Septation ring formation regulator, EzrA DJ92_1743 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_1743 PF03466 LysR substrate binding domain DJ92_1744 PF00892 EamA-like transporter family DJ92_1745 PF00440 Bacterial regulatory proteins, tetR family DJ92_1746 PF13185 GAF domain DJ92_1747 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ92_1748 PF01479 S4 domain DJ92_1748 PF00163 Ribosomal protein S4/S9 N-terminal domain DJ92_1750 PF01479 S4 domain DJ92_1750 PF00579 tRNA synthetases class I (W and Y) DJ92_1751 PF00440 Bacterial regulatory proteins, tetR family DJ92_1751 PF13977 BetI-type transcriptional repressor, C-terminal DJ92_1754 PF08281 Sigma-70, region 4 DJ92_1754 PF04542 Sigma-70 region 2 DJ92_1756 PF12464 Maltose acetyltransferase DJ92_1756 PF14602 Hexapeptide repeat of succinyl-transferase DJ92_1757 PF00501 AMP-binding enzyme DJ92_1757 PF13193 AMP-binding enzyme C-terminal domain DJ92_1758 PF00583 Acetyltransferase (GNAT) family DJ92_1759 PF00571 CBS domain DJ92_176 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ92_176 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ92_176 PF01842 ACT domain DJ92_1760 PF00850 Histone deacetylase domain DJ92_1762 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ92_1763 PF01741 Large-conductance mechanosensitive channel, MscL DJ92_1765 PF00356 Bacterial regulatory proteins, lacI family DJ92_1766 PF01817 Chorismate mutase type II DJ92_1766 PF00793 DAHP synthetase I family DJ92_1767 PF11009 Protein of unknown function (DUF2847) DJ92_1769 PF02073 Thermophilic metalloprotease (M29) DJ92_177 PF00266 Aminotransferase class-V DJ92_1773 PF13302 Acetyltransferase (GNAT) domain DJ92_1774 PF00892 EamA-like transporter family DJ92_1777 PF09397 Ftsk gamma domain DJ92_1777 PF01580 FtsK/SpoIIIE family DJ92_1777 PF17854 FtsK alpha domain DJ92_1778 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_1778 PF08239 Bacterial SH3 domain DJ92_1780 PF14794 Domain of unknown function (DUF4479) DJ92_1780 PF01588 Putative tRNA binding domain DJ92_1781 PF07285 Protein of unknown function (DUF1444) DJ92_1782 PF00085 Thioredoxin DJ92_1783 PF01931 Protein of unknown function DUF84 DJ92_1784 PF05343 M42 glutamyl aminopeptidase DJ92_1786 PF02803 Thiolase, C-terminal domain DJ92_1786 PF00108 Thiolase, N-terminal domain DJ92_1787 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ92_1787 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ92_1788 PF02515 CoA-transferase family III DJ92_1789 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_1789 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_1789 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_1790 PF13193 AMP-binding enzyme C-terminal domain DJ92_1790 PF00501 AMP-binding enzyme DJ92_1791 PF00753 Metallo-beta-lactamase superfamily DJ92_1792 PF02390 Putative methyltransferase DJ92_1793 PF14165 YtzH-like protein DJ92_1794 PF01636 Phosphotransferase enzyme family DJ92_1795 PF00128 Alpha amylase, catalytic domain DJ92_1795 PF17999 Pullulanase N1-terminal domain DJ92_1795 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ92_1796 PF02834 LigT like Phosphoesterase DJ92_1797 PF01546 Peptidase family M20/M25/M40 DJ92_1798 PF08220 DeoR-like helix-turn-helix domain DJ92_1799 PF01479 S4 domain DJ92_1799 PF00849 RNA pseudouridylate synthase DJ92_18 PF13536 Putative multidrug resistance efflux transporter DJ92_180 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_180 PF01434 Peptidase family M41 DJ92_180 PF17862 AAA+ lid domain DJ92_1800 PF01943 Polysaccharide biosynthesis protein DJ92_1800 PF14667 Polysaccharide biosynthesis C-terminal domain DJ92_1802 PF07690 Major Facilitator Superfamily DJ92_1803 PF01022 Bacterial regulatory protein, arsR family DJ92_1804 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DJ92_1806 PF10957 Sporulation protein Cse60 DJ92_1808 PF02559 CarD-like/TRCF domain DJ92_1809 PF07690 Major Facilitator Superfamily DJ92_181 PF04493 Endonuclease V DJ92_1810 PF02597 ThiS family DJ92_1811 PF02391 MoaE protein DJ92_1812 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DJ92_1813 PF00994 Probable molybdopterin binding domain DJ92_1813 PF03454 MoeA C-terminal region (domain IV) DJ92_1813 PF03453 MoeA N-terminal region (domain I and II) DJ92_1815 PF00899 ThiF family DJ92_1816 PF04055 Radical SAM superfamily DJ92_1816 PF06463 Molybdenum Cofactor Synthesis C DJ92_1817 PF01638 HxlR-like helix-turn-helix DJ92_1818 PF00881 Nitroreductase family DJ92_1819 PF00027 Cyclic nucleotide-binding domain DJ92_1819 PF00325 Bacterial regulatory proteins, crp family DJ92_1820 PF00384 Molybdopterin oxidoreductase DJ92_1820 PF01568 Molydopterin dinucleotide binding domain DJ92_1820 PF14710 Respiratory nitrate reductase alpha N-terminal DJ92_1821 PF14711 Respiratory nitrate reductase beta C-terminal DJ92_1821 PF13247 4Fe-4S dicluster domain DJ92_1822 PF02613 Nitrate reductase delta subunit DJ92_1823 PF02665 Nitrate reductase gamma subunit DJ92_1827 PF00581 Rhodanese-like domain DJ92_1829 PF00561 alpha/beta hydrolase fold DJ92_1830 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_1831 PF03845 Spore germination protein DJ92_1832 PF05504 Spore germination B3/ GerAC like, C-terminal DJ92_1837 PF00133 tRNA synthetases class I (I, L, M and V) DJ92_1837 PF08264 Anticodon-binding domain of tRNA DJ92_1837 PF09334 tRNA synthetases class I (M) DJ92_1837 PF13603 Leucyl-tRNA synthetase, Domain 2 DJ92_1838 PF07690 Major Facilitator Superfamily DJ92_1840 PF00005 ABC transporter DJ92_1841 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_1843 PF10732 Protein of unknown function (DUF2524) DJ92_1844 PF16199 Radical_SAM C-terminal domain DJ92_1844 PF04055 Radical SAM superfamily DJ92_1845 PF06962 Putative rRNA methylase DJ92_1846 PF00005 ABC transporter DJ92_1847 PF01177 Asp/Glu/Hydantoin racemase DJ92_185 PF07348 Syd protein (SUKH-2) DJ92_1850 PF10776 Protein of unknown function (DUF2600) DJ92_1851 PF12146 Serine aminopeptidase, S33 DJ92_1852 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_1853 PF01569 PAP2 superfamily DJ92_1854 PF00534 Glycosyl transferases group 1 DJ92_1854 PF13439 Glycosyltransferase Family 4 DJ92_1855 PF12804 MobA-like NTP transferase domain DJ92_1856 PF00994 Probable molybdopterin binding domain DJ92_1859 PF13302 Acetyltransferase (GNAT) domain DJ92_1861 PF01293 Phosphoenolpyruvate carboxykinase DJ92_1869 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1869 PF00989 PAS fold DJ92_1869 PF13426 PAS domain DJ92_1869 PF13188 PAS domain DJ92_1869 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1870 PF08447 PAS fold DJ92_1870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1870 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1870 PF00989 PAS fold DJ92_1871 PF01757 Acyltransferase family DJ92_1872 PF00149 Calcineurin-like phosphoesterase DJ92_1872 PF10518 TAT (twin-arginine translocation) pathway signal sequence DJ92_1876 PF00005 ABC transporter DJ92_1877 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_1879 PF13419 Haloacid dehalogenase-like hydrolase DJ92_188 PF01804 Penicillin amidase DJ92_1880 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_1881 PF00293 NUDIX domain DJ92_1888 PF00356 Bacterial regulatory proteins, lacI family DJ92_1889 PF01263 Aldose 1-epimerase DJ92_1890 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DJ92_1890 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DJ92_1891 PF00288 GHMP kinases N terminal domain DJ92_1891 PF08544 GHMP kinases C terminal DJ92_1891 PF10509 Galactokinase galactose-binding signature DJ92_1892 PF02664 S-Ribosylhomocysteinase (LuxS) DJ92_1893 PF00484 Carbonic anhydrase DJ92_1894 PF01809 Putative membrane protein insertion efficiency factor DJ92_1895 PF01654 Cytochrome bd terminal oxidase subunit I DJ92_1896 PF02322 Cytochrome bd terminal oxidase subunit II DJ92_1897 PF10676 Spore germination protein gerPA/gerPF DJ92_1899 PF03466 LysR substrate binding domain DJ92_1899 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_19 PF12867 DinB superfamily DJ92_1900 PF07690 Major Facilitator Superfamily DJ92_1904 PF04012 PspA/IM30 family DJ92_1906 PF07664 Ferrous iron transport protein B C terminus DJ92_1906 PF17910 FeoB cytosolic helical domain DJ92_1906 PF02421 Ferrous iron transport protein B DJ92_1906 PF07670 Nucleoside recognition DJ92_1908 PF09515 Thiamine transporter protein (Thia_YuaJ) DJ92_1909 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1909 PF00512 His Kinase A (phospho-acceptor) domain DJ92_1909 PF00672 HAMP domain DJ92_1910 PF00486 Transcriptional regulatory protein, C terminal DJ92_1910 PF00072 Response regulator receiver domain DJ92_1920 PF09335 SNARE associated Golgi protein DJ92_1921 PF00398 Ribosomal RNA adenine dimethylase DJ92_1922 PF02687 FtsX-like permease family DJ92_1923 PF00005 ABC transporter DJ92_1924 PF12833 Helix-turn-helix domain DJ92_1924 PF06445 GyrI-like small molecule binding domain DJ92_1926 PF00005 ABC transporter DJ92_1927 PF13630 SdpI/YhfL protein family DJ92_1927 PF07853 Protein of unknown function (DUF1648) DJ92_1928 PF01022 Bacterial regulatory protein, arsR family DJ92_1929 PF00072 Response regulator receiver domain DJ92_1929 PF00486 Transcriptional regulatory protein, C terminal DJ92_1930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_1931 PF02687 FtsX-like permease family DJ92_1932 PF00005 ABC transporter DJ92_1933 PF02687 FtsX-like permease family DJ92_1936 PF13378 Enolase C-terminal domain-like DJ92_1936 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ92_1937 PF00501 AMP-binding enzyme DJ92_1937 PF13193 AMP-binding enzyme C-terminal domain DJ92_1938 PF00378 Enoyl-CoA hydratase/isomerase DJ92_1939 PF00561 alpha/beta hydrolase fold DJ92_1940 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_1940 PF16582 Middle domain of thiamine pyrophosphate DJ92_1940 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_1941 PF00425 chorismate binding enzyme DJ92_1942 PF01040 UbiA prenyltransferase family DJ92_1943 PF01258 Prokaryotic dksA/traR C4-type zinc finger DJ92_1944 PF00313 'Cold-shock' DNA-binding domain DJ92_1946 PF13411 MerR HTH family regulatory protein DJ92_1946 PF07739 TipAS antibiotic-recognition domain DJ92_1949 PF00343 Carbohydrate phosphorylase DJ92_1950 PF00534 Glycosyl transferases group 1 DJ92_1950 PF08323 Starch synthase catalytic domain DJ92_1951 PF00483 Nucleotidyl transferase DJ92_1953 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ92_1953 PF02806 Alpha amylase, C-terminal all-beta domain DJ92_1953 PF00128 Alpha amylase, catalytic domain DJ92_1955 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ92_1955 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ92_1956 PF02627 Carboxymuconolactone decarboxylase family DJ92_1957 PF04542 Sigma-70 region 2 DJ92_1957 PF08281 Sigma-70, region 4 DJ92_1976 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ92_1976 PF05697 Bacterial trigger factor protein (TF) DJ92_1983 PF02308 MgtC family DJ92_1984 PF08868 YugN-like family DJ92_1985 PF07885 Ion channel DJ92_1985 PF02254 TrkA-N domain DJ92_1987 PF04070 Domain of unknown function (DUF378) DJ92_1988 PF00575 S1 RNA binding domain DJ92_1989 PF00155 Aminotransferase class I and II DJ92_1990 PF01037 Lrp/AsnC ligand binding domain DJ92_1991 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ92_1991 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ92_1992 PF08386 TAP-like protein DJ92_1992 PF00561 alpha/beta hydrolase fold DJ92_1994 PF00155 Aminotransferase class I and II DJ92_1995 PF00080 Copper/zinc superoxide dismutase (SODC) DJ92_1997 PF08810 Kinase associated protein B DJ92_1998 PF00929 Exonuclease DJ92_1999 PF03600 Citrate transporter DJ92_20 PF00561 alpha/beta hydrolase fold DJ92_2002 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_2002 PF03129 Anticodon binding domain DJ92_2003 PF03061 Thioesterase superfamily DJ92_2005 PF02632 BioY family DJ92_2006 PF00483 Nucleotidyl transferase DJ92_2007 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ92_2007 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ92_2007 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ92_2007 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ92_2008 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ92_2008 PF10372 Bacterial membrane-spanning protein N-terminus DJ92_2009 PF02789 Cytosol aminopeptidase family, N-terminal domain DJ92_2009 PF00883 Cytosol aminopeptidase family, catalytic domain DJ92_2011 PF06725 3D domain DJ92_2013 PF13344 Haloacid dehalogenase-like hydrolase DJ92_2013 PF00293 NUDIX domain DJ92_2014 PF17369 Family of unknown function (DUF5391) DJ92_2015 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2016 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2018 PF06445 GyrI-like small molecule binding domain DJ92_2023 PF04463 Protein of unknown function (DUF523) DJ92_2026 PF01521 Iron-sulphur cluster biosynthesis DJ92_2027 PF01678 Diaminopimelate epimerase DJ92_2028 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_2028 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_2028 PF07670 Nucleoside recognition DJ92_2029 PF07293 Protein of unknown function (DUF1450) DJ92_2030 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2031 PF03412 Peptidase C39 family DJ92_2031 PF00005 ABC transporter DJ92_2031 PF00664 ABC transporter transmembrane region DJ92_2032 PF03649 Uncharacterised protein family (UPF0014) DJ92_2035 PF07315 Protein of unknown function (DUF1462) DJ92_2036 PF01106 NifU-like domain DJ92_2038 PF04608 Phosphatidylglycerophosphatase A DJ92_2039 PF04232 Stage V sporulation protein S (SpoVS) DJ92_204 PF09346 SMI1 / KNR4 family (SUKH-1) DJ92_2041 PF02342 TerD domain DJ92_2044 PF11202 Phosphoribosyl transferase (PRTase) DJ92_2044 PF15608 PELOTA RNA binding domain DJ92_2046 PF10138 vWA found in TerF C terminus DJ92_2051 PF02687 FtsX-like permease family DJ92_2051 PF12704 MacB-like periplasmic core domain DJ92_2051 PF00005 ABC transporter DJ92_2052 PF02525 Flavodoxin-like fold DJ92_2053 PF13344 Haloacid dehalogenase-like hydrolase DJ92_2055 PF01934 Protein of unknown function DUF86 DJ92_2056 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ92_2060 PF06265 Protein of unknown function (DUF1027) DJ92_2061 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ92_2062 PF13411 MerR HTH family regulatory protein DJ92_2062 PF07739 TipAS antibiotic-recognition domain DJ92_2063 PF10086 YhfC intramembrane metalloprotease DJ92_2065 PF00583 Acetyltransferase (GNAT) family DJ92_2065 PF14268 YoaP-like DJ92_2067 PF04055 Radical SAM superfamily DJ92_2067 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family DJ92_2068 PF01551 Peptidase family M23 DJ92_2069 PF09560 Sporulation protein YunB (Spo_YunB) DJ92_207 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DJ92_207 PF03714 Bacterial pullanase-associated domain DJ92_207 PF00128 Alpha amylase, catalytic domain DJ92_2070 PF08827 Domain of unknown function (DUF1805) DJ92_2071 PF02872 5'-nucleotidase, C-terminal domain DJ92_2073 PF00155 Aminotransferase class I and II DJ92_2073 PF00392 Bacterial regulatory proteins, gntR family DJ92_2074 PF00005 ABC transporter DJ92_2076 PF17440 Thiol-activated cytolysin beta sandwich domain DJ92_2076 PF01289 Thiol-activated cytolysin DJ92_2077 PF01458 Uncharacterized protein family (UPF0051) DJ92_2078 PF01592 NifU-like N terminal domain DJ92_2079 PF00266 Aminotransferase class-V DJ92_2080 PF01458 Uncharacterized protein family (UPF0051) DJ92_2081 PF00005 ABC transporter DJ92_2082 PF03180 NLPA lipoprotein DJ92_2083 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_2084 PF00005 ABC transporter DJ92_2084 PF09383 NIL domain DJ92_2086 PF00085 Thioredoxin DJ92_2087 PF01751 Toprim domain DJ92_2088 PF01597 Glycine cleavage H-protein DJ92_2089 PF03960 ArsC family DJ92_2093 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ92_2093 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ92_2096 PF00753 Metallo-beta-lactamase superfamily DJ92_210 PF03747 ADP-ribosylglycohydrolase DJ92_2100 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_2100 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_2100 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_2101 PF02803 Thiolase, C-terminal domain DJ92_2101 PF00108 Thiolase, N-terminal domain DJ92_2102 PF00378 Enoyl-CoA hydratase/isomerase DJ92_2102 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ92_2102 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ92_2103 PF14115 YuzL-like protein DJ92_2104 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_2104 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_2105 PF01619 Proline dehydrogenase DJ92_2107 PF10835 Protein of unknown function (DUF2573) DJ92_2108 PF01910 Thiamine-binding protein DJ92_2112 PF07690 Major Facilitator Superfamily DJ92_2113 PF13520 Amino acid permease DJ92_2115 PF02096 60Kd inner membrane protein DJ92_2117 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_2117 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_2122 PF09335 SNARE associated Golgi protein DJ92_2126 PF13186 Iron-sulfur cluster-binding domain DJ92_2126 PF04055 Radical SAM superfamily DJ92_2127 PF01883 Iron-sulfur cluster assembly protein DJ92_2128 PF03413 Peptidase propeptide and YPEB domain DJ92_2128 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ92_2128 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ92_2128 PF01447 Thermolysin metallopeptidase, catalytic domain DJ92_2130 PF02678 Pirin DJ92_2130 PF17954 Quercetinase C-terminal cupin domain DJ92_2131 PF01047 MarR family DJ92_2133 PF00210 Ferritin-like domain DJ92_2135 PF03641 Possible lysine decarboxylase DJ92_2136 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ92_2137 PF00210 Ferritin-like domain DJ92_2138 PF04235 Protein of unknown function (DUF418) DJ92_2139 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_2139 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_2140 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_2140 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_2141 PF01235 Sodium:alanine symporter family DJ92_2142 PF13460 NAD(P)H-binding DJ92_2144 PF02632 BioY family DJ92_2145 PF00248 Aldo/keto reductase family DJ92_2146 PF07690 Major Facilitator Superfamily DJ92_2147 PF01638 HxlR-like helix-turn-helix DJ92_2148 PF07849 Protein of unknown function (DUF1641) DJ92_2149 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2150 PF01479 S4 domain DJ92_2150 PF00579 tRNA synthetases class I (W and Y) DJ92_2152 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DJ92_2152 PF01565 FAD binding domain DJ92_2154 PF04545 Sigma-70, region 4 DJ92_2154 PF04542 Sigma-70 region 2 DJ92_2156 PF10710 Protein of unknown function (DUF2512) DJ92_2157 PF05504 Spore germination B3/ GerAC like, C-terminal DJ92_2158 PF03845 Spore germination protein DJ92_2159 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_216 PF00561 alpha/beta hydrolase fold DJ92_2160 PF13302 Acetyltransferase (GNAT) domain DJ92_2161 PF06146 Phosphate-starvation-inducible E DJ92_2162 PF03551 Transcriptional regulator PadR-like family DJ92_2164 PF00854 POT family DJ92_2165 PF00144 Beta-lactamase DJ92_2166 PF01569 PAP2 superfamily DJ92_2168 PF01609 Transposase DDE domain DJ92_2172 PF00589 Phage integrase family DJ92_2172 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_2173 PF00589 Phage integrase family DJ92_2173 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_2174 PF01668 SmpB protein DJ92_2175 PF00773 RNB domain DJ92_2175 PF00575 S1 RNA binding domain DJ92_2175 PF17876 Cold shock domain DJ92_2175 PF08206 Ribonuclease B OB domain DJ92_2176 PF12146 Serine aminopeptidase, S33 DJ92_2177 PF03840 Preprotein translocase SecG subunit DJ92_2178 PF04172 LrgB-like family DJ92_2179 PF03788 LrgA family DJ92_2181 PF03952 Enolase, N-terminal domain DJ92_2181 PF00113 Enolase, C-terminal TIM barrel domain DJ92_2182 PF01676 Metalloenzyme superfamily DJ92_2182 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DJ92_2183 PF00121 Triosephosphate isomerase DJ92_2184 PF00162 Phosphoglycerate kinase DJ92_2185 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ92_2185 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DJ92_2186 PF04198 Putative sugar-binding domain DJ92_2188 PF04552 Sigma-54, DNA binding domain DJ92_2188 PF04963 Sigma-54 factor, core binding domain DJ92_2188 PF00309 Sigma-54 factor, Activator interacting domain (AID) DJ92_2192 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ92_2193 PF07451 Stage V sporulation protein AD (SpoVAD) DJ92_2194 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DJ92_2196 PF04239 Protein of unknown function (DUF421) DJ92_2197 PF00574 Clp protease DJ92_2198 PF00325 Bacterial regulatory proteins, crp family DJ92_2198 PF00027 Cyclic nucleotide-binding domain DJ92_2199 PF00301 Rubredoxin DJ92_2200 PF04324 BFD-like [2Fe-2S] binding domain DJ92_2200 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ92_2200 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ92_2200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2200 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ92_2201 PF00258 Flavodoxin DJ92_2201 PF00753 Metallo-beta-lactamase superfamily DJ92_2203 PF14256 YwiC-like protein DJ92_2204 PF01814 Hemerythrin HHE cation binding domain DJ92_2204 PF04405 Domain of Unknown function (DUF542) DJ92_2205 PF13545 Crp-like helix-turn-helix domain DJ92_2205 PF00027 Cyclic nucleotide-binding domain DJ92_2208 PF00381 PTS HPr component phosphorylation site DJ92_2209 PF10298 WhiA N-terminal LAGLIDADG-like domain DJ92_2209 PF02650 WhiA C-terminal HTH domain DJ92_2209 PF14527 WhiA LAGLIDADG-like domain DJ92_2210 PF01933 Uncharacterised protein family UPF0052 DJ92_2211 PF03668 P-loop ATPase protein family DJ92_2212 PF00293 NUDIX domain DJ92_2217 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2219 PF14602 Hexapeptide repeat of succinyl-transferase DJ92_2220 PF13419 Haloacid dehalogenase-like hydrolase DJ92_2221 PF01790 Prolipoprotein diacylglyceryl transferase DJ92_2223 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DJ92_2224 PF17755 UvrA DNA-binding domain DJ92_2224 PF00005 ABC transporter DJ92_2224 PF17760 UvrA interaction domain DJ92_2225 PF02151 UvrB/uvrC motif DJ92_2225 PF00271 Helicase conserved C-terminal domain DJ92_2225 PF04851 Type III restriction enzyme, res subunit DJ92_2225 PF17757 UvrB interaction domain DJ92_2225 PF12344 Ultra-violet resistance protein B DJ92_2227 PF13520 Amino acid permease DJ92_2230 PF03601 Conserved hypothetical protein 698 DJ92_2231 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_2231 PF03466 LysR substrate binding domain DJ92_2232 PF00376 MerR family regulatory protein DJ92_2232 PF09278 MerR, DNA binding DJ92_2233 PF03358 NADPH-dependent FMN reductase DJ92_2234 PF00005 ABC transporter DJ92_2234 PF12848 ABC transporter DJ92_2235 PF01906 Putative heavy-metal-binding DJ92_2236 PF17820 PDZ domain DJ92_2237 PF17820 PDZ domain DJ92_2237 PF01471 Putative peptidoglycan binding domain DJ92_2237 PF03572 Peptidase family S41 DJ92_2238 PF02687 FtsX-like permease family DJ92_2238 PF18075 FtsX extracellular domain DJ92_2239 PF00005 ABC transporter DJ92_2241 PF00472 RF-1 domain DJ92_2241 PF03462 PCRF domain DJ92_2242 PF07516 SecA Wing and Scaffold domain DJ92_2242 PF01043 SecA preprotein cross-linking domain DJ92_2242 PF02810 SEC-C motif DJ92_2242 PF07517 SecA DEAD-like domain DJ92_2243 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DJ92_2243 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DJ92_2244 PF00313 'Cold-shock' DNA-binding domain DJ92_2246 PF00271 Helicase conserved C-terminal domain DJ92_2246 PF04851 Type III restriction enzyme, res subunit DJ92_2247 PF01476 LysM domain DJ92_2247 PF00877 NlpC/P60 family DJ92_2247 PF08239 Bacterial SH3 domain DJ92_2248 PF01638 HxlR-like helix-turn-helix DJ92_2249 PF02645 Uncharacterised protein, DegV family COG1307 DJ92_2250 PF09186 Domain of unknown function (DUF1949) DJ92_2250 PF01205 Uncharacterized protein family UPF0029 DJ92_2251 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_2252 PF02350 UDP-N-acetylglucosamine 2-epimerase DJ92_2253 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ92_2253 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ92_2253 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ92_2254 PF00953 Glycosyl transferase family 4 DJ92_2256 PF00874 PRD domain DJ92_2256 PF03610 PTS system fructose IIA component DJ92_2256 PF00158 Sigma-54 interaction domain DJ92_2258 PF02417 Chromate transporter DJ92_2259 PF04794 YdjC-like protein DJ92_2260 PF02056 Family 4 glycosyl hydrolase DJ92_2260 PF11975 Family 4 glycosyl hydrolase C-terminal domain DJ92_2261 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ92_2262 PF02378 Phosphotransferase system, EIIC DJ92_2263 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ92_2266 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DJ92_2267 PF02378 Phosphotransferase system, EIIC DJ92_2268 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ92_2269 PF00375 Sodium:dicarboxylate symporter family DJ92_2275 PF01654 Cytochrome bd terminal oxidase subunit I DJ92_2276 PF02322 Cytochrome bd terminal oxidase subunit II DJ92_2277 PF02040 Arsenical pump membrane protein DJ92_2278 PF01964 Radical SAM ThiC family DJ92_2278 PF13667 ThiC-associated domain DJ92_2280 PF02652 L-lactate permease DJ92_2281 PF09988 Uncharacterized metal-binding protein (DUF2227) DJ92_2283 PF00884 Sulfatase DJ92_2284 PF01063 Amino-transferase class IV DJ92_2285 PF01476 LysM domain DJ92_2285 PF00877 NlpC/P60 family DJ92_2286 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_2286 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_2288 PF02028 BCCT, betaine/carnitine/choline family transporter DJ92_2289 PF06725 3D domain DJ92_2289 PF01476 LysM domain DJ92_2294 PF04434 SWIM zinc finger DJ92_2295 PF00271 Helicase conserved C-terminal domain DJ92_2295 PF00176 SNF2 family N-terminal domain DJ92_2295 PF12419 SNF2 Helicase protein DJ92_2302 PF04893 Yip1 domain DJ92_2303 PF02687 FtsX-like permease family DJ92_2303 PF12704 MacB-like periplasmic core domain DJ92_2304 PF00005 ABC transporter DJ92_2308 PF07690 Major Facilitator Superfamily DJ92_2311 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2311 PF00672 HAMP domain DJ92_2311 PF00512 His Kinase A (phospho-acceptor) domain DJ92_2312 PF00072 Response regulator receiver domain DJ92_2312 PF00486 Transcriptional regulatory protein, C terminal DJ92_2313 PF16363 GDP-mannose 4,6 dehydratase DJ92_2314 PF12804 MobA-like NTP transferase domain DJ92_2315 PF00892 EamA-like transporter family DJ92_2317 PF04991 LicD family DJ92_2319 PF16363 GDP-mannose 4,6 dehydratase DJ92_232 PF05762 VWA domain containing CoxE-like protein DJ92_2320 PF04203 Sortase domain DJ92_2322 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ92_2324 PF02397 Bacterial sugar transferase DJ92_2327 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DJ92_2327 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DJ92_2327 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DJ92_2328 PF04932 O-Antigen ligase DJ92_2330 PF02719 Polysaccharide biosynthesis protein DJ92_2331 PF00483 Nucleotidyl transferase DJ92_2332 PF00483 Nucleotidyl transferase DJ92_2334 PF13614 AAA domain DJ92_2335 PF13807 G-rich domain on putative tyrosine kinase DJ92_2335 PF02706 Chain length determinant protein DJ92_2336 PF07977 FabA-like domain DJ92_2337 PF00664 ABC transporter transmembrane region DJ92_2337 PF00005 ABC transporter DJ92_234 PF07728 AAA domain (dynein-related subfamily) DJ92_2343 PF13537 Glutamine amidotransferase domain DJ92_2343 PF00733 Asparagine synthase DJ92_2344 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ92_2346 PF02397 Bacterial sugar transferase DJ92_2348 PF00535 Glycosyl transferase family 2 DJ92_2349 PF01757 Acyltransferase family DJ92_2351 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_2351 PF12464 Maltose acetyltransferase DJ92_2353 PF00534 Glycosyl transferases group 1 DJ92_2355 PF00535 Glycosyl transferase family 2 DJ92_2360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DJ92_2360 PF00535 Glycosyl transferase family 2 DJ92_2361 PF00534 Glycosyl transferases group 1 DJ92_2361 PF13439 Glycosyltransferase Family 4 DJ92_2362 PF00535 Glycosyl transferase family 2 DJ92_2363 PF13439 Glycosyltransferase Family 4 DJ92_2363 PF00534 Glycosyl transferases group 1 DJ92_2364 PF02719 Polysaccharide biosynthesis protein DJ92_2365 PF13614 AAA domain DJ92_2366 PF13807 G-rich domain on putative tyrosine kinase DJ92_2366 PF02706 Chain length determinant protein DJ92_2367 PF00483 Nucleotidyl transferase DJ92_2368 PF08239 Bacterial SH3 domain DJ92_2368 PF00005 ABC transporter DJ92_2369 PF01061 ABC-2 type transporter DJ92_2370 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DJ92_2371 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ92_2371 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ92_2372 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DJ92_2373 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DJ92_2374 PF01467 Cytidylyltransferase-like DJ92_2376 PF12116 Stage III sporulation protein D DJ92_2377 PF01551 Peptidase family M23 DJ92_2379 PF00005 ABC transporter DJ92_2380 PF00005 ABC transporter DJ92_2381 PF00501 AMP-binding enzyme DJ92_2381 PF13193 AMP-binding enzyme C-terminal domain DJ92_2382 PF08486 Stage II sporulation protein DJ92_2383 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ92_2385 PF06612 Protein of unknown function (DUF1146) DJ92_2386 PF00361 Proton-conducting membrane transporter DJ92_2388 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DJ92_2388 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DJ92_2388 PF00361 Proton-conducting membrane transporter DJ92_2389 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L DJ92_2390 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DJ92_2393 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit DJ92_2394 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DJ92_2395 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit DJ92_2396 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 DJ92_240 PF07732 Multicopper oxidase DJ92_240 PF07731 Multicopper oxidase DJ92_2400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ92_2400 PF02874 ATP synthase alpha/beta family, beta-barrel domain DJ92_2401 PF00231 ATP synthase DJ92_2404 PF00430 ATP synthase B/B' CF(0) DJ92_2405 PF00137 ATP synthase subunit C DJ92_2406 PF00119 ATP synthase A chain DJ92_2407 PF03899 ATP synthase I chain DJ92_241 PF05195 Aminopeptidase P, N-terminal domain DJ92_241 PF00557 Metallopeptidase family M24 DJ92_2410 PF00464 Serine hydroxymethyltransferase DJ92_2411 PF04260 Protein of unknown function (DUF436) DJ92_2412 PF02502 Ribose/Galactose Isomerase DJ92_2413 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ92_2414 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ92_2415 PF07681 DoxX DJ92_2416 PF01613 Flavin reductase like domain DJ92_2419 PF01300 Telomere recombination DJ92_2419 PF03481 Putative GTP-binding controlling metal-binding DJ92_2421 PF09551 Stage II sporulation protein R (spore_II_R) DJ92_2422 PF17827 PrmC N-terminal domain DJ92_2422 PF13847 Methyltransferase domain DJ92_2424 PF00265 Thymidine kinase DJ92_2425 PF01197 Ribosomal protein L31 DJ92_2426 PF07498 Rho termination factor, N-terminal domain DJ92_2426 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DJ92_2426 PF07497 Rho termination factor, RNA-binding domain DJ92_2427 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DJ92_2428 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ92_2429 PF01116 Fructose-bisphosphate aldolase class-II DJ92_2430 PF00072 Response regulator receiver domain DJ92_2431 PF10740 Domain of unknown function (DUF2529) DJ92_2432 PF00117 Glutamine amidotransferase class-I DJ92_2432 PF06418 CTP synthase N-terminus DJ92_2433 PF05066 HB1, ASXL, restriction endonuclease HTH domain DJ92_2435 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_2435 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_2435 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_2436 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_2436 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_2436 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_2437 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DJ92_2437 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DJ92_2438 PF00108 Thiolase, N-terminal domain DJ92_2438 PF02803 Thiolase, C-terminal domain DJ92_2439 PF02754 Cysteine-rich domain DJ92_2439 PF13183 4Fe-4S dicluster domain DJ92_2440 PF13091 PLD-like domain DJ92_2445 PF00072 Response regulator receiver domain DJ92_2445 PF00196 Bacterial regulatory proteins, luxR family DJ92_2446 PF07730 Histidine kinase DJ92_2446 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2448 PF00005 ABC transporter DJ92_2449 PF00557 Metallopeptidase family M24 DJ92_2450 PF04389 Peptidase family M28 DJ92_2450 PF02225 PA domain DJ92_2452 PF03485 Arginyl tRNA synthetase N terminal domain DJ92_2452 PF05746 DALR anticodon binding domain DJ92_2452 PF00750 tRNA synthetases class I (R) DJ92_2454 PF17676 LD-carboxypeptidase C-terminal domain DJ92_2454 PF02016 LD-carboxypeptidase N-terminal domain DJ92_2457 PF00491 Arginase family DJ92_2458 PF17284 Spermidine synthase tetramerisation domain DJ92_2459 PF07690 Major Facilitator Superfamily DJ92_2460 PF13411 MerR HTH family regulatory protein DJ92_2461 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ92_2462 PF00912 Transglycosylase DJ92_2462 PF00905 Penicillin binding protein transpeptidase domain DJ92_2463 PF08741 YwhD family DJ92_2464 PF02163 Peptidase family M50 DJ92_2465 PF01361 Tautomerase enzyme DJ92_2466 PF01966 HD domain DJ92_2467 PF01497 Periplasmic binding protein DJ92_2468 PF00005 ABC transporter DJ92_2469 PF01032 FecCD transport family DJ92_2470 PF01032 FecCD transport family DJ92_2471 PF07293 Protein of unknown function (DUF1450) DJ92_2474 PF03099 Biotin/lipoate A/B protein ligase family DJ92_2475 PF01515 Phosphate acetyl/butaryl transferase DJ92_2477 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_2477 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_2478 PF07486 Cell Wall Hydrolase DJ92_2479 PF09671 Spore coat protein (Spore_GerQ) DJ92_2480 PF04241 Protein of unknown function (DUF423) DJ92_2482 PF07885 Ion channel DJ92_2482 PF02254 TrkA-N domain DJ92_2483 PF00860 Permease family DJ92_2485 PF12823 Domain of unknown function (DUF3817) DJ92_2486 PF03167 Uracil DNA glycosylase superfamily DJ92_2487 PF12679 ABC-2 family transporter protein DJ92_2488 PF00005 ABC transporter DJ92_2489 PF13472 GDSL-like Lipase/Acylhydrolase family DJ92_2490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DJ92_2490 PF00356 Bacterial regulatory proteins, lacI family DJ92_2492 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_2493 PF03447 Homoserine dehydrogenase, NAD binding domain DJ92_2493 PF00742 Homoserine dehydrogenase DJ92_2493 PF01842 ACT domain DJ92_2495 PF01053 Cys/Met metabolism PLP-dependent enzyme DJ92_2499 PF13419 Haloacid dehalogenase-like hydrolase DJ92_2500 PF00027 Cyclic nucleotide-binding domain DJ92_2501 PF02525 Flavodoxin-like fold DJ92_2502 PF00196 Bacterial regulatory proteins, luxR family DJ92_2502 PF00072 Response regulator receiver domain DJ92_2503 PF13185 GAF domain DJ92_2503 PF07730 Histidine kinase DJ92_2504 PF08543 Phosphomethylpyrimidine kinase DJ92_2506 PF02554 Carbon starvation protein CstA DJ92_2506 PF13722 5TM C-terminal transporter carbon starvation CstA DJ92_2507 PF04397 LytTr DNA-binding domain DJ92_2507 PF00072 Response regulator receiver domain DJ92_2508 PF07690 Major Facilitator Superfamily DJ92_2509 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ92_251 PF03747 ADP-ribosylglycohydrolase DJ92_2510 PF13439 Glycosyltransferase Family 4 DJ92_2510 PF00534 Glycosyl transferases group 1 DJ92_2512 PF03458 UPF0126 domain DJ92_2514 PF03061 Thioesterase superfamily DJ92_2516 PF00535 Glycosyl transferase family 2 DJ92_2518 PF00440 Bacterial regulatory proteins, tetR family DJ92_2518 PF08361 MAATS-type transcriptional repressor, C-terminal region DJ92_2519 PF00005 ABC transporter DJ92_2519 PF12848 ABC transporter DJ92_2522 PF00535 Glycosyl transferase family 2 DJ92_2523 PF00440 Bacterial regulatory proteins, tetR family DJ92_2524 PF00873 AcrB/AcrD/AcrF family DJ92_2525 PF01625 Peptide methionine sulfoxide reductase DJ92_2525 PF01641 SelR domain DJ92_2526 PF01594 AI-2E family transporter DJ92_2527 PF04172 LrgB-like family DJ92_2528 PF03788 LrgA family DJ92_2529 PF00072 Response regulator receiver domain DJ92_2529 PF04397 LytTr DNA-binding domain DJ92_2530 PF13492 GAF domain DJ92_2530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2530 PF06580 Histidine kinase DJ92_2530 PF07694 5TMR of 5TMR-LYT DJ92_2532 PF02898 Nitric oxide synthase, oxygenase domain DJ92_2534 PF02293 AmiS/UreI family transporter DJ92_2536 PF03006 Haemolysin-III related DJ92_2541 PF03880 DbpA RNA binding domain DJ92_2541 PF00270 DEAD/DEAH box helicase DJ92_2541 PF00271 Helicase conserved C-terminal domain DJ92_2544 PF00375 Sodium:dicarboxylate symporter family DJ92_2545 PF08279 HTH domain DJ92_2545 PF00072 Response regulator receiver domain DJ92_2546 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2546 PF17203 Single cache domain 3 DJ92_2546 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ92_2547 PF03480 Bacterial extracellular solute-binding protein, family 7 DJ92_2548 PF00478 IMP dehydrogenase / GMP reductase domain DJ92_2550 PF02590 Predicted SPOUT methyltransferase DJ92_2552 PF13180 PDZ domain DJ92_2553 PF00753 Metallo-beta-lactamase superfamily DJ92_2554 PF09648 YycH protein DJ92_2556 PF13426 PAS domain DJ92_2556 PF00512 His Kinase A (phospho-acceptor) domain DJ92_2556 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2556 PF00672 HAMP domain DJ92_2557 PF00072 Response regulator receiver domain DJ92_2557 PF00486 Transcriptional regulatory protein, C terminal DJ92_2562 PF00709 Adenylosuccinate synthetase DJ92_2563 PF03796 DnaB-like helicase C terminal domain DJ92_2563 PF00772 DnaB-like helicase N terminal domain DJ92_2564 PF01281 Ribosomal protein L9, N-terminal domain DJ92_2564 PF03948 Ribosomal protein L9, C-terminal domain DJ92_2565 PF01368 DHH family DJ92_2565 PF02272 DHHA1 domain DJ92_2566 PF09991 Predicted membrane protein (DUF2232) DJ92_2567 PF01084 Ribosomal protein S18 DJ92_2568 PF00436 Single-strand binding protein family DJ92_2569 PF01250 Ribosomal protein S6 DJ92_2570 PF06071 Protein of unknown function (DUF933) DJ92_2570 PF01926 50S ribosome-binding GTPase DJ92_2571 PF06107 Bacterial protein of unknown function (DUF951) DJ92_2572 PF00924 Mechanosensitive ion channel DJ92_2573 PF06866 Protein of unknown function (DUF1256) DJ92_2574 PF02195 ParB-like nuclease domain DJ92_2574 PF17762 HTH domain found in ParB protein DJ92_2575 PF13614 AAA domain DJ92_2576 PF02195 ParB-like nuclease domain DJ92_2576 PF17762 HTH domain found in ParB protein DJ92_2577 PF02527 rRNA small subunit methyltransferase G DJ92_2578 PF13932 GidA associated domain DJ92_2578 PF01134 Glucose inhibited division protein A DJ92_2579 PF12631 MnmE helical domain DJ92_2579 PF01926 50S ribosome-binding GTPase DJ92_2579 PF10396 GTP-binding protein TrmE N-terminus DJ92_2580 PF14804 Jag N-terminus DJ92_2580 PF01424 R3H domain DJ92_2581 PF02096 60Kd inner membrane protein DJ92_2582 PF00825 Ribonuclease P DJ92_2583 PF00468 Ribosomal protein L34 DJ92_2584 PF11638 DnaA N-terminal domain DJ92_2584 PF08299 Bacterial dnaA protein helix-turn-helix DJ92_2584 PF00308 Bacterial dnaA protein DJ92_2585 PF02767 DNA polymerase III beta subunit, central domain DJ92_2585 PF02768 DNA polymerase III beta subunit, C-terminal domain DJ92_2585 PF00712 DNA polymerase III beta subunit, N-terminal domain DJ92_2587 PF02463 RecF/RecN/SMC N terminal domain DJ92_2588 PF00204 DNA gyrase B DJ92_2588 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2588 PF00986 DNA gyrase B subunit, carboxyl terminus DJ92_2588 PF01751 Toprim domain DJ92_2589 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ92_2589 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ92_2596 PF14175 YaaC-like Protein DJ92_2597 PF00478 IMP dehydrogenase / GMP reductase domain DJ92_2597 PF00571 CBS domain DJ92_2598 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_2598 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_2599 PF01680 SOR/SNZ family DJ92_2600 PF01174 SNO glutamine amidotransferase family DJ92_2601 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_2601 PF02403 Seryl-tRNA synthetase N-terminal domain DJ92_2604 PF01712 Deoxynucleoside kinase DJ92_2605 PF01712 Deoxynucleoside kinase DJ92_2606 PF00857 Isochorismatase family DJ92_2607 PF14437 MafB19-like deaminase DJ92_2608 PF12169 DNA polymerase III subunits gamma and tau domain III DJ92_2609 PF02575 YbaB/EbfC DNA-binding family DJ92_2610 PF13662 Toprim domain DJ92_2610 PF02132 RecR protein DJ92_2611 PF10704 Protein of unknown function (DUF2508) DJ92_2620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DJ92_2620 PF01276 Orn/Lys/Arg decarboxylase, major domain DJ92_2621 PF02223 Thymidylate kinase DJ92_2622 PF09115 DNA polymerase III, delta subunit, C terminal DJ92_2623 PF04468 PSP1 C-terminal conserved region DJ92_2624 PF06156 Initiation control protein YabA DJ92_2625 PF05175 Methyltransferase small domain DJ92_2626 PF01541 GIY-YIG catalytic domain DJ92_2627 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_2628 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_2628 PF18277 AbrB C-terminal domain DJ92_2629 PF08264 Anticodon-binding domain of tRNA DJ92_2629 PF01588 Putative tRNA binding domain DJ92_2629 PF09334 tRNA synthetases class I (M) DJ92_2630 PF01026 TatD related DNase DJ92_2631 PF13662 Toprim domain DJ92_2631 PF13331 Domain of unknown function (DUF4093) DJ92_2633 PF05582 YabG peptidase U57 DJ92_2634 PF06257 Biofilm formation stimulator VEG DJ92_2635 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_2636 PF00288 GHMP kinases N terminal domain DJ92_2636 PF08544 GHMP kinases C terminal DJ92_2637 PF09182 Bacterial purine repressor, N-terminal DJ92_2637 PF00156 Phosphoribosyl transferase domain DJ92_2638 PF01042 Endoribonuclease L-PSP DJ92_2639 PF04026 SpoVG DJ92_2640 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_2640 PF00483 Nucleotidyl transferase DJ92_2641 PF14572 Phosphoribosyl synthetase-associated domain DJ92_2641 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DJ92_2642 PF01195 Peptidyl-tRNA hydrolase DJ92_2644 PF03461 TRCF domain DJ92_2644 PF17757 UvrB interaction domain DJ92_2644 PF02559 CarD-like/TRCF domain DJ92_2644 PF00271 Helicase conserved C-terminal domain DJ92_2644 PF00270 DEAD/DEAH box helicase DJ92_2645 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_2645 PF15714 Stage V sporulation protein T C-terminal, transcription factor DJ92_2646 PF01943 Polysaccharide biosynthesis protein DJ92_2646 PF14667 Polysaccharide biosynthesis C-terminal domain DJ92_2647 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_2647 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ92_2648 PF01479 S4 domain DJ92_2649 PF07873 YabP family DJ92_2650 PF09578 Spore cortex protein YabQ (Spore_YabQ) DJ92_2652 PF00575 S1 RNA binding domain DJ92_2655 PF07228 Stage II sporulation protein E (SpoIIE) DJ92_2656 PF11734 TilS substrate C-terminal domain DJ92_2656 PF01171 PP-loop family DJ92_2656 PF09179 TilS substrate binding domain DJ92_2658 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_2658 PF17862 AAA+ lid domain DJ92_2658 PF06480 FtsH Extracellular DJ92_2658 PF01434 Peptidase family M41 DJ92_2659 PF03309 Type III pantothenate kinase DJ92_2660 PF01430 Hsp33 protein DJ92_2661 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_2662 PF00425 chorismate binding enzyme DJ92_2662 PF04715 Anthranilate synthase component I, N terminal region DJ92_2663 PF00117 Glutamine amidotransferase class-I DJ92_2664 PF01063 Amino-transferase class IV DJ92_2665 PF00809 Pterin binding enzyme DJ92_2666 PF02152 Dihydroneopterin aldolase DJ92_2667 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DJ92_2668 PF01381 Helix-turn-helix DJ92_2669 PF01207 Dihydrouridine synthase (Dus) DJ92_2670 PF01336 OB-fold nucleic acid binding domain DJ92_2670 PF00152 tRNA synthetases class II (D, K and N) DJ92_2677 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ92_2677 PF05697 Bacterial trigger factor protein (TF) DJ92_2686 PF17727 CtsR C-terminal dimerization domain DJ92_2686 PF05848 CtsR N-terminal HTH domain DJ92_2687 PF02151 UvrB/uvrC motif DJ92_2688 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DJ92_2689 PF17871 AAA lid domain DJ92_2689 PF02861 Clp amino terminal domain, pathogenicity island component DJ92_2689 PF10431 C-terminal, D2-small domain, of ClpB protein DJ92_2689 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_2689 PF07724 AAA domain (Cdc48 subfamily) DJ92_2690 PF18073 Rubredoxin metal binding domain DJ92_2691 PF10635 DisA bacterial checkpoint controller linker region DJ92_2691 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ92_2694 PF02542 YgbB family DJ92_2695 PF00749 tRNA synthetases class I (E and Q), catalytic domain DJ92_2696 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_2696 PF06426 Serine acetyltransferase, N-terminal DJ92_2697 PF09190 DALR domain DJ92_2697 PF01406 tRNA synthetases class I (C) catalytic domain DJ92_2698 PF00636 Ribonuclease III domain DJ92_2699 PF00588 SpoU rRNA Methylase family DJ92_2699 PF08032 RNA 2'-O ribose methyltransferase substrate binding DJ92_2700 PF05991 YacP-like NYN domain DJ92_2701 PF04542 Sigma-70 region 2 DJ92_2701 PF08281 Sigma-70, region 4 DJ92_2702 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DJ92_2703 PF00467 KOW motif DJ92_2703 PF02357 Transcription termination factor nusG DJ92_2704 PF03946 Ribosomal protein L11, N-terminal domain DJ92_2704 PF00298 Ribosomal protein L11, RNA binding domain DJ92_2705 PF00687 Ribosomal protein L1p/L10e family DJ92_2706 PF00466 Ribosomal protein L10 DJ92_2707 PF00542 Ribosomal protein L7/L12 C-terminal domain DJ92_2707 PF16320 Ribosomal protein L7/L12 dimerisation domain DJ92_2708 PF05175 Methyltransferase small domain DJ92_2709 PF04565 RNA polymerase Rpb2, domain 3 DJ92_2709 PF10385 RNA polymerase beta subunit external 1 domain DJ92_2709 PF04563 RNA polymerase beta subunit DJ92_2709 PF04561 RNA polymerase Rpb2, domain 2 DJ92_2709 PF04560 RNA polymerase Rpb2, domain 7 DJ92_2709 PF00562 RNA polymerase Rpb2, domain 6 DJ92_2710 PF04997 RNA polymerase Rpb1, domain 1 DJ92_2710 PF00623 RNA polymerase Rpb1, domain 2 DJ92_2710 PF04998 RNA polymerase Rpb1, domain 5 DJ92_2710 PF05000 RNA polymerase Rpb1, domain 4 DJ92_2710 PF04983 RNA polymerase Rpb1, domain 3 DJ92_2711 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ92_2712 PF00164 Ribosomal protein S12/S23 DJ92_2713 PF00177 Ribosomal protein S7p/S5e DJ92_2716 PF00338 Ribosomal protein S10p/S20e DJ92_2717 PF00297 Ribosomal protein L3 DJ92_2720 PF03947 Ribosomal Proteins L2, C-terminal domain DJ92_2720 PF00181 Ribosomal Proteins L2, RNA binding domain DJ92_2721 PF00203 Ribosomal protein S19 DJ92_2722 PF00237 Ribosomal protein L22p/L17e DJ92_2723 PF00189 Ribosomal protein S3, C-terminal domain DJ92_2723 PF07650 KH domain DJ92_2724 PF00252 Ribosomal protein L16p/L10e DJ92_2725 PF00831 Ribosomal L29 protein DJ92_2726 PF00366 Ribosomal protein S17 DJ92_2727 PF00238 Ribosomal protein L14p/L23e DJ92_2729 PF00281 Ribosomal protein L5 DJ92_2729 PF00673 ribosomal L5P family C-terminus DJ92_273 PF03747 ADP-ribosylglycohydrolase DJ92_2730 PF00253 Ribosomal protein S14p/S29e DJ92_2731 PF00410 Ribosomal protein S8 DJ92_2732 PF00347 Ribosomal protein L6 DJ92_2733 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DJ92_2734 PF03719 Ribosomal protein S5, C-terminal domain DJ92_2734 PF00333 Ribosomal protein S5, N-terminal domain DJ92_2735 PF00327 Ribosomal protein L30p/L7e DJ92_2736 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DJ92_2737 PF00344 SecY translocase DJ92_2738 PF05191 Adenylate kinase, active site lid DJ92_2739 PF00557 Metallopeptidase family M24 DJ92_2740 PF01176 Translation initiation factor 1A / IF-1 DJ92_2741 PF00444 Ribosomal protein L36 DJ92_2742 PF00416 Ribosomal protein S13/S18 DJ92_2743 PF00411 Ribosomal protein S11 DJ92_2744 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DJ92_2744 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DJ92_2744 PF01000 RNA polymerase Rpb3/RpoA insert domain DJ92_2745 PF01196 Ribosomal protein L17 DJ92_2746 PF00005 ABC transporter DJ92_2747 PF00005 ABC transporter DJ92_2748 PF02361 Cobalt transport protein DJ92_2749 PF01416 tRNA pseudouridine synthase DJ92_2750 PF00572 Ribosomal protein L13 DJ92_2751 PF00380 Ribosomal protein S9/S16 DJ92_2753 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_2754 PF10609 NUBPL iron-transfer P-loop NTPase DJ92_2755 PF17898 Spore germination GerD central core domain DJ92_2756 PF14089 KinB-signalling pathway activation in sporulation DJ92_2757 PF01522 Polysaccharide deacetylase DJ92_2774 PF02595 Glycerate kinase family DJ92_2775 PF00491 Arginase family DJ92_2776 PF02457 DisA bacterial checkpoint controller nucleotide-binding DJ92_2777 PF07949 YbbR-like protein DJ92_2778 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DJ92_2778 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DJ92_2778 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DJ92_2778 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DJ92_2779 PF01380 SIS domain DJ92_2783 PF06445 GyrI-like small molecule binding domain DJ92_2786 PF07690 Major Facilitator Superfamily DJ92_2791 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_2792 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ92_2792 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ92_2793 PF06800 Sugar transport protein DJ92_2794 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_2796 PF12728 Helix-turn-helix domain DJ92_2796 PF12727 PBP superfamily domain DJ92_2799 PF01553 Acyltransferase DJ92_28 PF01522 Polysaccharide deacetylase DJ92_2802 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_2802 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_2803 PF10414 Sirohaem synthase dimerisation region DJ92_2803 PF14824 Sirohaem biosynthesis protein central DJ92_2803 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_2804 PF01903 CbiX DJ92_2805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_2806 PF00355 Rieske [2Fe-2S] domain DJ92_2807 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_2807 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ92_2807 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ92_2807 PF04324 BFD-like [2Fe-2S] binding domain DJ92_2807 PF18267 Rubredoxin NAD+ reductase C-terminal domain DJ92_2810 PF01026 TatD related DNase DJ92_2816 PF12848 ABC transporter DJ92_2816 PF16326 ABC transporter C-terminal domain DJ92_2816 PF00005 ABC transporter DJ92_2817 PF07730 Histidine kinase DJ92_2818 PF00196 Bacterial regulatory proteins, luxR family DJ92_2818 PF00072 Response regulator receiver domain DJ92_2819 PF00005 ABC transporter DJ92_2823 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_2824 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_2825 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_2826 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ92_2826 PF00005 ABC transporter DJ92_2827 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ92_2827 PF00005 ABC transporter DJ92_283 PF14044 NETI protein DJ92_2834 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_2835 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ92_2837 PF13520 Amino acid permease DJ92_2838 PF07690 Major Facilitator Superfamily DJ92_2839 PF07478 D-ala D-ala ligase C-terminus DJ92_2839 PF01820 D-ala D-ala ligase N-terminus DJ92_284 PF07690 Major Facilitator Superfamily DJ92_2840 PF02875 Mur ligase family, glutamate ligase domain DJ92_2840 PF01225 Mur ligase family, catalytic domain DJ92_2840 PF08245 Mur ligase middle domain DJ92_2841 PF00271 Helicase conserved C-terminal domain DJ92_2841 PF00270 DEAD/DEAH box helicase DJ92_2842 PF03851 UV-endonuclease UvdE DJ92_2844 PF01648 4'-phosphopantetheinyl transferase superfamily DJ92_2846 PF00842 Alanine racemase, C-terminal domain DJ92_2846 PF01168 Alanine racemase, N-terminal domain DJ92_2847 PF01402 Ribbon-helix-helix protein, copG family DJ92_2848 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DJ92_2849 PF09371 Tex-like protein N-terminal domain DJ92_2849 PF16921 Tex protein YqgF-like domain DJ92_2849 PF00575 S1 RNA binding domain DJ92_2849 PF17674 HHH domain DJ92_2851 PF10263 SprT-like family DJ92_2851 PF17283 SprT-like zinc ribbon domain DJ92_286 PF00561 alpha/beta hydrolase fold DJ92_2860 PF05697 Bacterial trigger factor protein (TF) DJ92_2860 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ92_287 PF01047 MarR family DJ92_2871 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DJ92_2872 PF00814 Glycoprotease family DJ92_2873 PF00583 Acetyltransferase (GNAT) family DJ92_2874 PF00814 Glycoprotease family DJ92_2875 PF00005 ABC transporter DJ92_2875 PF16326 ABC transporter C-terminal domain DJ92_2875 PF12848 ABC transporter DJ92_2876 PF06971 Putative DNA-binding protein N-terminus DJ92_2876 PF02629 CoA binding domain DJ92_2878 PF02517 CPBP intramembrane metalloprotease DJ92_2879 PF00166 Chaperonin 10 Kd subunit DJ92_288 PF07690 Major Facilitator Superfamily DJ92_2880 PF00118 TCP-1/cpn60 chaperonin family DJ92_2881 PF00958 GMP synthase C terminal domain DJ92_2881 PF00117 Glutamine amidotransferase class-I DJ92_2881 PF02540 NAD synthase DJ92_2882 PF00860 Permease family DJ92_2883 PF00072 Response regulator receiver domain DJ92_2883 PF00486 Transcriptional regulatory protein, C terminal DJ92_2884 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2884 PF16736 Single Cache-like DJ92_2884 PF00989 PAS fold DJ92_2884 PF00512 His Kinase A (phospho-acceptor) domain DJ92_2892 PF00892 EamA-like transporter family DJ92_2897 PF02673 Bacitracin resistance protein BacA DJ92_2898 PF00144 Beta-lactamase DJ92_29 PF00884 Sulfatase DJ92_2900 PF00005 ABC transporter DJ92_2901 PF00512 His Kinase A (phospho-acceptor) domain DJ92_2901 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2902 PF00072 Response regulator receiver domain DJ92_2902 PF00486 Transcriptional regulatory protein, C terminal DJ92_2907 PF00892 EamA-like transporter family DJ92_291 PF02525 Flavodoxin-like fold DJ92_2911 PF00731 AIR carboxylase DJ92_2912 PF02222 ATP-grasp domain DJ92_2912 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DJ92_2913 PF10397 Adenylosuccinate lyase C-terminus DJ92_2913 PF00206 Lyase DJ92_2915 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DJ92_2917 PF00586 AIR synthase related protein, N-terminal domain DJ92_2917 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DJ92_2917 PF02769 AIR synthase related protein, C-terminal domain DJ92_2918 PF00156 Phosphoribosyl transferase domain DJ92_2919 PF00586 AIR synthase related protein, N-terminal domain DJ92_2919 PF02769 AIR synthase related protein, C-terminal domain DJ92_2920 PF00551 Formyl transferase DJ92_2922 PF02844 Phosphoribosylglycinamide synthetase, N domain DJ92_2922 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DJ92_2922 PF02843 Phosphoribosylglycinamide synthetase, C domain DJ92_2925 PF02347 Glycine cleavage system P-protein DJ92_2926 PF02347 Glycine cleavage system P-protein DJ92_2927 PF00324 Amino acid permease DJ92_2932 PF01884 PcrB family DJ92_2933 PF00580 UvrD/REP helicase N-terminal domain DJ92_2933 PF13361 UvrD-like helicase C-terminal domain DJ92_2934 PF12826 Helix-hairpin-helix motif DJ92_2934 PF03120 NAD-dependent DNA ligase OB-fold domain DJ92_2934 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DJ92_2934 PF01653 NAD-dependent DNA ligase adenylation domain DJ92_2934 PF00533 BRCA1 C Terminus (BRCT) domain DJ92_2935 PF07537 CamS sex pheromone cAM373 precursor DJ92_2936 PF01925 Sulfite exporter TauE/SafE DJ92_2937 PF00171 Aldehyde dehydrogenase family DJ92_2939 PF00857 Isochorismatase family DJ92_294 PF14256 YwiC-like protein DJ92_2942 PF17886 HSP20-like domain found in ArsA DJ92_2942 PF02374 Anion-transporting ATPase DJ92_2943 PF01047 MarR family DJ92_2944 PF05360 yiaA/B two helix domain DJ92_2945 PF02686 Glu-tRNAGln amidotransferase C subunit DJ92_2946 PF01425 Amidase DJ92_2947 PF02637 GatB domain DJ92_2947 PF02934 GatB/GatE catalytic domain DJ92_2948 PF00781 Diacylglycerol kinase catalytic domain DJ92_2949 PF13419 Haloacid dehalogenase-like hydrolase DJ92_2950 PF00202 Aminotransferase class-III DJ92_2951 PF00158 Sigma-54 interaction domain DJ92_2952 PF00171 Aldehyde dehydrogenase family DJ92_2953 PF00171 Aldehyde dehydrogenase family DJ92_2954 PF02073 Thermophilic metalloprotease (M29) DJ92_2959 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_2959 PF07670 Nucleoside recognition DJ92_2959 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_296 PF00005 ABC transporter DJ92_2960 PF05958 tRNA (Uracil-5-)-methyltransferase DJ92_2960 PF13847 Methyltransferase domain DJ92_2960 PF01938 TRAM domain DJ92_2961 PF01207 Dihydrouridine synthase (Dus) DJ92_2962 PF07308 Protein of unknown function (DUF1456) DJ92_2965 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ92_2965 PF13378 Enolase C-terminal domain-like DJ92_2966 PF07687 Peptidase dimerisation domain DJ92_2966 PF01546 Peptidase family M20/M25/M40 DJ92_2968 PF01636 Phosphotransferase enzyme family DJ92_2970 PF00455 DeoR C terminal sensor domain DJ92_2970 PF08220 DeoR-like helix-turn-helix domain DJ92_2971 PF00596 Class II Aldolase and Adducin N-terminal domain DJ92_2972 PF01032 FecCD transport family DJ92_2973 PF01032 FecCD transport family DJ92_2974 PF01497 Periplasmic binding protein DJ92_2977 PF12728 Helix-turn-helix domain DJ92_2982 PF00512 His Kinase A (phospho-acceptor) domain DJ92_2982 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_2982 PF13188 PAS domain DJ92_2982 PF00989 PAS fold DJ92_2982 PF13426 PAS domain DJ92_2985 PF10127 RNA repair pathway DNA polymerase beta family DJ92_2986 PF01266 FAD dependent oxidoreductase DJ92_2986 PF00355 Rieske [2Fe-2S] domain DJ92_2988 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_2989 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ92_2990 PF00005 ABC transporter DJ92_2991 PF08031 Berberine and berberine like DJ92_2991 PF01565 FAD binding domain DJ92_2992 PF02863 Arginine repressor, C-terminal domain DJ92_2992 PF01316 Arginine repressor, DNA binding domain DJ92_2994 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DJ92_2994 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DJ92_2995 PF13520 Amino acid permease DJ92_2996 PF00696 Amino acid kinase family DJ92_2997 PF13545 Crp-like helix-turn-helix domain DJ92_2997 PF00027 Cyclic nucleotide-binding domain DJ92_2999 PF16657 Maltogenic Amylase, C-terminal domain DJ92_2999 PF00128 Alpha amylase, catalytic domain DJ92_30 PF12848 ABC transporter DJ92_30 PF00005 ABC transporter DJ92_300 PF03737 Aldolase/RraA DJ92_3000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DJ92_3000 PF02378 Phosphotransferase system, EIIC DJ92_3000 PF00367 phosphotransferase system, EIIB DJ92_3001 PF03372 Endonuclease/Exonuclease/phosphatase family DJ92_3002 PF01061 ABC-2 type transporter DJ92_3003 PF01131 DNA topoisomerase DJ92_3003 PF01751 Toprim domain DJ92_3004 PF01032 FecCD transport family DJ92_3005 PF01032 FecCD transport family DJ92_3006 PF00005 ABC transporter DJ92_3007 PF01497 Periplasmic binding protein DJ92_3008 PF02110 Hydroxyethylthiazole kinase family DJ92_3009 PF02581 Thiamine monophosphate synthase DJ92_3010 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_3010 PF13291 ACT domain DJ92_3011 PF03605 Anaerobic c4-dicarboxylate membrane transporter DJ92_3013 PF01910 Thiamine-binding protein DJ92_3014 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3016 PF00005 ABC transporter DJ92_3017 PF12848 ABC transporter DJ92_3017 PF00005 ABC transporter DJ92_3019 PF03180 NLPA lipoprotein DJ92_302 PF04073 Aminoacyl-tRNA editing domain DJ92_3020 PF00005 ABC transporter DJ92_3020 PF09383 NIL domain DJ92_3021 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3025 PF00440 Bacterial regulatory proteins, tetR family DJ92_3025 PF08360 QacR-like protein, C-terminal region DJ92_3028 PF11700 Vacuole effluxer Atg22 like DJ92_303 PF03129 Anticodon binding domain DJ92_303 PF13393 Histidyl-tRNA synthetase DJ92_3032 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_3032 PF09180 Prolyl-tRNA synthetase, C-terminal DJ92_3032 PF03129 Anticodon binding domain DJ92_3035 PF07968 Leukocidin/Hemolysin toxin family DJ92_3036 PF02342 TerD domain DJ92_3037 PF02342 TerD domain DJ92_3038 PF02342 TerD domain DJ92_3039 PF03741 Integral membrane protein TerC family DJ92_304 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_304 PF00107 Zinc-binding dehydrogenase DJ92_3040 PF14266 Putative component of 'biosynthetic module' DJ92_3041 PF05816 Toxic anion resistance protein (TelA) DJ92_3042 PF00690 Cation transporter/ATPase, N-terminus DJ92_3042 PF00689 Cation transporting ATPase, C-terminus DJ92_3043 PF06569 Protein of unknown function (DUF1128) DJ92_3044 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ92_3046 PF03631 Virulence factor BrkB DJ92_3049 PF00892 EamA-like transporter family DJ92_3051 PF10502 Signal peptidase, peptidase S26 DJ92_3055 PF09335 SNARE associated Golgi protein DJ92_3058 PF16242 Pyridoxamine 5'-phosphate oxidase like DJ92_3059 PF01699 Sodium/calcium exchanger protein DJ92_3060 PF14167 YfkD-like protein DJ92_3061 PF04055 Radical SAM superfamily DJ92_3061 PF08756 YfkB-like domain DJ92_3063 PF05683 Fumarase C-terminus DJ92_3063 PF05681 Fumarate hydratase (Fumerase) DJ92_3064 PF01522 Polysaccharide deacetylase DJ92_3065 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ92_3066 PF05958 tRNA (Uracil-5-)-methyltransferase DJ92_3066 PF01938 TRAM domain DJ92_3070 PF01416 tRNA pseudouridine synthase DJ92_3071 PF02954 Bacterial regulatory protein, Fis family DJ92_3071 PF00158 Sigma-54 interaction domain DJ92_3071 PF13426 PAS domain DJ92_3073 PF00324 Amino acid permease DJ92_308 PF00005 ABC transporter DJ92_3080 PF04960 Glutaminase DJ92_3081 PF02378 Phosphotransferase system, EIIC DJ92_3081 PF00367 phosphotransferase system, EIIB DJ92_3082 PF00144 Beta-lactamase DJ92_3083 PF01323 DSBA-like thioredoxin domain DJ92_3084 PF02901 Pyruvate formate lyase-like DJ92_3084 PF01228 Glycine radical DJ92_3085 PF04055 Radical SAM superfamily DJ92_3086 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DJ92_3086 PF04101 Glycosyltransferase family 28 C-terminal domain DJ92_3089 PF01979 Amidohydrolase family DJ92_3090 PF08338 Domain of unknown function (DUF1731) DJ92_3090 PF01370 NAD dependent epimerase/dehydratase family DJ92_3091 PF02631 RecX family DJ92_3092 PF08838 Protein of unknown function (DUF1811) DJ92_3094 PF08176 Small acid-soluble spore protein K family DJ92_3095 PF14043 WVELL protein DJ92_3096 PF04307 LexA-binding, inner membrane-associated putative hydrolase DJ92_3097 PF14815 NUDIX domain DJ92_3097 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ92_3098 PF00149 Calcineurin-like phosphoesterase DJ92_3100 PF04259 Small, acid-soluble spore protein, gamma-type DJ92_3101 PF14182 YgaB-like protein DJ92_3102 PF04167 Protein of unknown function (DUF402) DJ92_3103 PF06081 Aromatic acid exporter family member 1 DJ92_3104 PF00664 ABC transporter transmembrane region DJ92_3104 PF00005 ABC transporter DJ92_3105 PF01493 GXGXG motif DJ92_3105 PF01645 Conserved region in glutamate synthase DJ92_3105 PF04898 Glutamate synthase central domain DJ92_3105 PF00310 Glutamine amidotransferases class-II DJ92_3107 PF00005 ABC transporter DJ92_311 PF13419 Haloacid dehalogenase-like hydrolase DJ92_3110 PF07885 Ion channel DJ92_3111 PF00578 AhpC/TSA family DJ92_3112 PF01475 Ferric uptake regulator family DJ92_3134 PF01709 Transcriptional regulator DJ92_3136 PF00905 Penicillin binding protein transpeptidase domain DJ92_3136 PF00912 Transglycosylase DJ92_3137 PF13462 Thioredoxin DJ92_3139 PF08331 Domain of unknown function (DUF1730) DJ92_3140 PF12671 Putative amidase domain DJ92_3141 PF00588 SpoU rRNA Methylase family DJ92_3143 PF08298 PrkA AAA domain DJ92_3143 PF06798 PrkA serine protein kinase C-terminal domain DJ92_3144 PF04285 Protein of unknown function (DUF444) DJ92_3146 PF15975 Flotillin DJ92_3146 PF01145 SPFH domain / Band 7 family DJ92_3147 PF00072 Response regulator receiver domain DJ92_3147 PF00486 Transcriptional regulatory protein, C terminal DJ92_3148 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3148 PF16736 Single Cache-like DJ92_3148 PF00989 PAS fold DJ92_3148 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3151 PF01906 Putative heavy-metal-binding DJ92_3153 PF12787 EcsC protein family DJ92_3157 PF12431 Transcriptional regulator DJ92_3157 PF00072 Response regulator receiver domain DJ92_3158 PF03600 Citrate transporter DJ92_316 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ92_316 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ92_316 PF13288 DXP reductoisomerase C-terminal domain DJ92_3163 PF00005 ABC transporter DJ92_3168 PF00753 Metallo-beta-lactamase superfamily DJ92_3169 PF01073 3-beta hydroxysteroid dehydrogenase/isomerase family DJ92_317 PF01594 AI-2E family transporter DJ92_3171 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ92_3171 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ92_3172 PF17912 MalK OB fold domain DJ92_3172 PF00005 ABC transporter DJ92_3173 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3174 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3175 PF13416 Bacterial extracellular solute-binding protein DJ92_3176 PF00072 Response regulator receiver domain DJ92_3176 PF00486 Transcriptional regulatory protein, C terminal DJ92_3177 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3177 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3179 PF13529 Peptidase_C39 like family DJ92_3180 PF00989 PAS fold DJ92_3180 PF17203 Single cache domain 3 DJ92_3180 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ92_3180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3181 PF00072 Response regulator receiver domain DJ92_3182 PF03390 2-hydroxycarboxylate transporter family DJ92_3183 PF00390 Malic enzyme, N-terminal domain DJ92_3183 PF03949 Malic enzyme, NAD binding domain DJ92_3185 PF00892 EamA-like transporter family DJ92_3186 PF00155 Aminotransferase class I and II DJ92_3186 PF00392 Bacterial regulatory proteins, gntR family DJ92_3188 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3188 PF00672 HAMP domain DJ92_3188 PF00989 PAS fold DJ92_3188 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3188 PF18698 Histidine kinase sensor domain DJ92_3189 PF00072 Response regulator receiver domain DJ92_3189 PF00486 Transcriptional regulatory protein, C terminal DJ92_3192 PF02634 FdhD/NarQ family DJ92_3193 PF00384 Molybdopterin oxidoreductase DJ92_3193 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ92_3193 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ92_3193 PF01568 Molydopterin dinucleotide binding domain DJ92_3193 PF00037 4Fe-4S binding domain DJ92_3194 PF07849 Protein of unknown function (DUF1641) DJ92_3196 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ92_3196 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ92_3197 PF13520 Amino acid permease DJ92_3199 PF01022 Bacterial regulatory protein, arsR family DJ92_32 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ92_3200 PF00403 Heavy-metal-associated domain DJ92_3201 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DJ92_3201 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DJ92_3201 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DJ92_3204 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ92_3204 PF03413 Peptidase propeptide and YPEB domain DJ92_3204 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ92_3204 PF01447 Thermolysin metallopeptidase, catalytic domain DJ92_3206 PF02583 Metal-sensitive transcriptional repressor DJ92_3207 PF00403 Heavy-metal-associated domain DJ92_3208 PF00403 Heavy-metal-associated domain DJ92_3211 PF04294 VanW like protein DJ92_3212 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_3213 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_3213 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_3214 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_3215 PF00571 CBS domain DJ92_3215 PF03471 Transporter associated domain DJ92_3215 PF01595 Cyclin M transmembrane N-terminal domain DJ92_3216 PF10415 Fumarase C C-terminus DJ92_3216 PF00206 Lyase DJ92_3217 PF02652 L-lactate permease DJ92_3218 PF01022 Bacterial regulatory protein, arsR family DJ92_3219 PF08141 Small acid-soluble spore protein H family DJ92_3220 PF00854 POT family DJ92_3221 PF01497 Periplasmic binding protein DJ92_3222 PF01032 FecCD transport family DJ92_3223 PF01032 FecCD transport family DJ92_3224 PF00005 ABC transporter DJ92_3225 PF08003 Protein of unknown function (DUF1698) DJ92_3226 PF00155 Aminotransferase class I and II DJ92_3227 PF01370 NAD dependent epimerase/dehydratase family DJ92_3229 PF00092 von Willebrand factor type A domain DJ92_3230 PF07728 AAA domain (dynein-related subfamily) DJ92_3231 PF13091 PLD-like domain DJ92_3231 PF13396 Phospholipase_D-nuclease N-terminal DJ92_3235 PF13520 Amino acid permease DJ92_3236 PF00392 Bacterial regulatory proteins, gntR family DJ92_3236 PF07702 UTRA domain DJ92_3237 PF00367 phosphotransferase system, EIIB DJ92_3237 PF02378 Phosphotransferase system, EIIC DJ92_3238 PF00128 Alpha amylase, catalytic domain DJ92_3238 PF16657 Maltogenic Amylase, C-terminal domain DJ92_3239 PF01636 Phosphotransferase enzyme family DJ92_324 PF07690 Major Facilitator Superfamily DJ92_3240 PF01235 Sodium:alanine symporter family DJ92_3241 PF00005 ABC transporter DJ92_3242 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ92_3243 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3244 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3245 PF00324 Amino acid permease DJ92_3247 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3247 PF00989 PAS fold DJ92_3247 PF00672 HAMP domain DJ92_3247 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3247 PF18698 Histidine kinase sensor domain DJ92_3248 PF00072 Response regulator receiver domain DJ92_3248 PF00486 Transcriptional regulatory protein, C terminal DJ92_3250 PF00582 Universal stress protein family DJ92_3252 PF07690 Major Facilitator Superfamily DJ92_3253 PF01047 MarR family DJ92_3254 PF07690 Major Facilitator Superfamily DJ92_3255 PF00356 Bacterial regulatory proteins, lacI family DJ92_3256 PF00294 pfkB family carbohydrate kinase DJ92_3257 PF05025 RbsD / FucU transport protein family DJ92_3258 PF00005 ABC transporter DJ92_3259 PF02653 Branched-chain amino acid transport system / permease component DJ92_326 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_326 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_3260 PF13407 Periplasmic binding protein domain DJ92_3261 PF00923 Transaldolase/Fructose-6-phosphate aldolase DJ92_3262 PF05547 Immune inhibitor A peptidase M6 DJ92_3263 PF05036 Sporulation related domain DJ92_3263 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_3265 PF00107 Zinc-binding dehydrogenase DJ92_3265 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_3266 PF02254 TrkA-N domain DJ92_3266 PF07885 Ion channel DJ92_3267 PF00882 Zinc dependent phospholipase C DJ92_3269 PF01565 FAD binding domain DJ92_3269 PF04030 D-arabinono-1,4-lactone oxidase DJ92_327 PF05163 DinB family DJ92_3272 PF06725 3D domain DJ92_3272 PF01476 LysM domain DJ92_3273 PF01381 Helix-turn-helix DJ92_3276 PF04203 Sortase domain DJ92_3277 PF00854 POT family DJ92_3278 PF05525 Branched-chain amino acid transport protein DJ92_3279 PF05525 Branched-chain amino acid transport protein DJ92_328 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DJ92_3283 PF00324 Amino acid permease DJ92_3284 PF00860 Permease family DJ92_3287 PF13673 Acetyltransferase (GNAT) domain DJ92_3289 PF02080 TrkA-C domain DJ92_3289 PF00999 Sodium/hydrogen exchanger family DJ92_3289 PF02254 TrkA-N domain DJ92_329 PF06039 Malate:quinone oxidoreductase (Mqo) DJ92_3291 PF00510 Cytochrome c oxidase subunit III DJ92_3292 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ92_3293 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DJ92_3294 PF00324 Amino acid permease DJ92_3295 PF13529 Peptidase_C39 like family DJ92_3296 PF01546 Peptidase family M20/M25/M40 DJ92_3296 PF07687 Peptidase dimerisation domain DJ92_3297 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_3298 PF03845 Spore germination protein DJ92_3299 PF05504 Spore germination B3/ GerAC like, C-terminal DJ92_33 PF02153 Prephenate dehydrogenase DJ92_33 PF01842 ACT domain DJ92_3300 PF02421 Ferrous iron transport protein B DJ92_3300 PF07670 Nucleoside recognition DJ92_3300 PF17910 FeoB cytosolic helical domain DJ92_3300 PF07664 Ferrous iron transport protein B C terminus DJ92_3301 PF07664 Ferrous iron transport protein B C terminus DJ92_3301 PF07670 Nucleoside recognition DJ92_3301 PF17910 FeoB cytosolic helical domain DJ92_3301 PF02421 Ferrous iron transport protein B DJ92_3302 PF04023 FeoA domain DJ92_3302 PF07664 Ferrous iron transport protein B C terminus DJ92_3302 PF17910 FeoB cytosolic helical domain DJ92_3302 PF02421 Ferrous iron transport protein B DJ92_3302 PF07670 Nucleoside recognition DJ92_3303 PF12849 PBP superfamily domain DJ92_3304 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3305 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3307 PF00873 AcrB/AcrD/AcrF family DJ92_331 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_3315 PF05697 Bacterial trigger factor protein (TF) DJ92_3315 PF05698 Bacterial trigger factor protein (TF) C-terminus DJ92_333 PF01595 Cyclin M transmembrane N-terminal domain DJ92_333 PF00571 CBS domain DJ92_333 PF03471 Transporter associated domain DJ92_3332 PF00571 CBS domain DJ92_3336 PF03070 TENA/THI-4/PQQC family DJ92_3337 PF00005 ABC transporter DJ92_3338 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3339 PF09084 NMT1/THI5 like DJ92_334 PF13411 MerR HTH family regulatory protein DJ92_3340 PF02581 Thiamine monophosphate synthase DJ92_3341 PF01266 FAD dependent oxidoreductase DJ92_3342 PF02597 ThiS family DJ92_3343 PF05690 Thiazole biosynthesis protein ThiG DJ92_3344 PF00899 ThiF family DJ92_3345 PF08543 Phosphomethylpyrimidine kinase DJ92_3349 PF03814 Potassium-transporting ATPase A subunit DJ92_3351 PF02669 K+-transporting ATPase, c chain DJ92_3352 PF07690 Major Facilitator Superfamily DJ92_3353 PF02702 Osmosensitive K+ channel His kinase sensor domain DJ92_3354 PF01047 MarR family DJ92_3357 PF00860 Permease family DJ92_3359 PF03734 L,D-transpeptidase catalytic domain DJ92_3361 PF00085 Thioredoxin DJ92_3362 PF02600 Disulfide bond formation protein DsbB DJ92_3363 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_3364 PF14148 YhdB-like protein DJ92_3366 PF03845 Spore germination protein DJ92_3368 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_337 PF00892 EamA-like transporter family DJ92_3370 PF00881 Nitroreductase family DJ92_3371 PF04293 SpoVR like protein DJ92_3373 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_3373 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ92_3374 PF02583 Metal-sensitive transcriptional repressor DJ92_3375 PF00581 Rhodanese-like domain DJ92_3375 PF00753 Metallo-beta-lactamase superfamily DJ92_3376 PF01206 Sulfurtransferase TusA DJ92_3377 PF00581 Rhodanese-like domain DJ92_3378 PF00581 Rhodanese-like domain DJ92_3379 PF13686 DsrE/DsrF/DrsH-like family DJ92_338 PF00805 Pentapeptide repeats (8 copies) DJ92_3380 PF01925 Sulfite exporter TauE/SafE DJ92_3382 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_3383 PF02690 Na+/Pi-cotransporter DJ92_3385 PF07690 Major Facilitator Superfamily DJ92_3389 PF12704 MacB-like periplasmic core domain DJ92_3389 PF02687 FtsX-like permease family DJ92_339 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_339 PF03466 LysR substrate binding domain DJ92_3390 PF00005 ABC transporter DJ92_3392 PF09529 Integral membrane protein (intg_mem_TP0381) DJ92_3395 PF05525 Branched-chain amino acid transport protein DJ92_3396 PF05067 Manganese containing catalase DJ92_3397 PF12652 CotJB protein DJ92_3398 PF11007 Spore coat associated protein JA (CotJA) DJ92_34 PF00155 Aminotransferase class I and II DJ92_340 PF00857 Isochorismatase family DJ92_3403 PF09335 SNARE associated Golgi protein DJ92_3406 PF13520 Amino acid permease DJ92_3407 PF00999 Sodium/hydrogen exchanger family DJ92_3409 PF01418 Helix-turn-helix domain, rpiR family DJ92_3409 PF01380 SIS domain DJ92_341 PF06906 Protein of unknown function (DUF1272) DJ92_3410 PF13580 SIS domain DJ92_3411 PF02378 Phosphotransferase system, EIIC DJ92_3411 PF00367 phosphotransferase system, EIIB DJ92_3417 PF00892 EamA-like transporter family DJ92_3418 PF01037 Lrp/AsnC ligand binding domain DJ92_3421 PF01638 HxlR-like helix-turn-helix DJ92_3423 PF02525 Flavodoxin-like fold DJ92_3424 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_3424 PF12793 Sugar transport-related sRNA regulator N-term DJ92_3425 PF07690 Major Facilitator Superfamily DJ92_3427 PF01609 Transposase DDE domain DJ92_3428 PF04542 Sigma-70 region 2 DJ92_3429 PF12791 Anti-sigma factor N-terminus DJ92_3430 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ92_3430 PF01522 Polysaccharide deacetylase DJ92_3432 PF13520 Amino acid permease DJ92_3433 PF00171 Aldehyde dehydrogenase family DJ92_3435 PF00664 ABC transporter transmembrane region DJ92_3435 PF00005 ABC transporter DJ92_3436 PF00005 ABC transporter DJ92_3436 PF00664 ABC transporter transmembrane region DJ92_3437 PF00497 Bacterial extracellular solute-binding proteins, family 3 DJ92_3438 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3439 PF00005 ABC transporter DJ92_3440 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_3442 PF14398 YheC/D like ATP-grasp DJ92_3443 PF04286 Protein of unknown function (DUF445) DJ92_3445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_3445 PF00205 Thiamine pyrophosphate enzyme, central domain DJ92_3445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_3446 PF03306 Alpha-acetolactate decarboxylase DJ92_3447 PF02245 Methylpurine-DNA glycosylase (MPG) DJ92_3449 PF04055 Radical SAM superfamily DJ92_345 PF00293 NUDIX domain DJ92_3450 PF13193 AMP-binding enzyme C-terminal domain DJ92_3450 PF00501 AMP-binding enzyme DJ92_3453 PF01740 STAS domain DJ92_3453 PF00916 Sulfate permease family DJ92_3455 PF00378 Enoyl-CoA hydratase/isomerase DJ92_3458 PF05343 M42 glutamyl aminopeptidase DJ92_3460 PF03845 Spore germination protein DJ92_3461 PF03323 Bacillus/Clostridium GerA spore germination protein DJ92_3463 PF11121 Protein of unknown function (DUF2639) DJ92_3464 PF00324 Amino acid permease DJ92_3465 PF00202 Aminotransferase class-III DJ92_3466 PF00171 Aldehyde dehydrogenase family DJ92_3470 PF08943 CsiD DJ92_3471 PF01266 FAD dependent oxidoreductase DJ92_3473 PF00196 Bacterial regulatory proteins, luxR family DJ92_3473 PF00072 Response regulator receiver domain DJ92_3474 PF07730 Histidine kinase DJ92_3474 PF05384 Sensor protein DegS DJ92_3474 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3476 PF07690 Major Facilitator Superfamily DJ92_3484 PF02954 Bacterial regulatory protein, Fis family DJ92_3484 PF00158 Sigma-54 interaction domain DJ92_3484 PF00989 PAS fold DJ92_3485 PF05544 Proline racemase DJ92_3486 PF00083 Sugar (and other) transporter DJ92_3487 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DJ92_3487 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3488 PF00072 Response regulator receiver domain DJ92_3488 PF08279 HTH domain DJ92_3488 PF12431 Transcriptional regulator DJ92_3489 PF03401 Tripartite tricarboxylate transporter family receptor DJ92_349 PF02567 Phenazine biosynthesis-like protein DJ92_3492 PF08676 MutL C terminal dimerisation domain DJ92_3492 PF01119 DNA mismatch repair protein, C-terminal domain DJ92_3498 PF00145 C-5 cytosine-specific DNA methylase DJ92_35 PF01264 Chorismate synthase DJ92_3506 PF04851 Type III restriction enzyme, res subunit DJ92_3506 PF00271 Helicase conserved C-terminal domain DJ92_3510 PF00772 DnaB-like helicase N terminal domain DJ92_3510 PF03796 DnaB-like helicase C terminal domain DJ92_3513 PF13477 Glycosyl transferase 4-like DJ92_3513 PF00534 Glycosyl transferases group 1 DJ92_3514 PF00535 Glycosyl transferase family 2 DJ92_3517 PF16363 GDP-mannose 4,6 dehydratase DJ92_3518 PF02397 Bacterial sugar transferase DJ92_3519 PF13614 AAA domain DJ92_3521 PF12833 Helix-turn-helix domain DJ92_3524 PF07690 Major Facilitator Superfamily DJ92_3525 PF01565 FAD binding domain DJ92_3526 PF17676 LD-carboxypeptidase C-terminal domain DJ92_3526 PF02016 LD-carboxypeptidase N-terminal domain DJ92_3528 PF00245 Alkaline phosphatase DJ92_3534 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_3535 PF13556 PucR C-terminal helix-turn-helix domain DJ92_3535 PF17853 GGDEF-like domain DJ92_3535 PF06018 CodY GAF-like domain DJ92_3536 PF01522 Polysaccharide deacetylase DJ92_3539 PF04294 VanW like protein DJ92_354 PF02525 Flavodoxin-like fold DJ92_3542 PF01752 Collagenase DJ92_3542 PF18496 Collagenase G catalytic helper subdomain DJ92_3542 PF08453 Peptidase family M9 N-terminal DJ92_3544 PF00882 Zinc dependent phospholipase C DJ92_3545 PF00005 ABC transporter DJ92_3545 PF00664 ABC transporter transmembrane region DJ92_3546 PF00664 ABC transporter transmembrane region DJ92_3546 PF00005 ABC transporter DJ92_3547 PF07730 Histidine kinase DJ92_3548 PF00196 Bacterial regulatory proteins, luxR family DJ92_3548 PF00072 Response regulator receiver domain DJ92_355 PF01638 HxlR-like helix-turn-helix DJ92_3550 PF01609 Transposase DDE domain DJ92_3551 PF13610 DDE domain DJ92_3552 PF00067 Cytochrome P450 DJ92_3553 PF13700 Domain of unknown function (DUF4158) DJ92_3553 PF01526 Tn3 transposase DDE domain DJ92_3554 PF17802 Prealbumin-like fold domain DJ92_3554 PF05738 Cna protein B-type domain DJ92_3554 PF05737 Collagen binding domain DJ92_3560 PF13610 DDE domain DJ92_3561 PF01047 MarR family DJ92_3564 PF01323 DSBA-like thioredoxin domain DJ92_3565 PF02525 Flavodoxin-like fold DJ92_3566 PF07690 Major Facilitator Superfamily DJ92_3568 PF07859 alpha/beta hydrolase fold DJ92_3573 PF13520 Amino acid permease DJ92_3574 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_3575 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ92_3575 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DJ92_3576 PF13520 Amino acid permease DJ92_3577 PF03315 Serine dehydratase beta chain DJ92_3577 PF01842 ACT domain DJ92_3578 PF03313 Serine dehydratase alpha chain DJ92_358 PF13411 MerR HTH family regulatory protein DJ92_358 PF07739 TipAS antibiotic-recognition domain DJ92_3581 PF01289 Thiol-activated cytolysin DJ92_3581 PF17440 Thiol-activated cytolysin beta sandwich domain DJ92_3582 PF02333 Phytase DJ92_3583 PF00857 Isochorismatase family DJ92_3584 PF06906 Protein of unknown function (DUF1272) DJ92_3585 PF01037 Lrp/AsnC ligand binding domain DJ92_3586 PF01609 Transposase DDE domain DJ92_359 PF07690 Major Facilitator Superfamily DJ92_3597 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3597 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3599 PF00486 Transcriptional regulatory protein, C terminal DJ92_3599 PF00072 Response regulator receiver domain DJ92_36 PF00793 DAHP synthetase I family DJ92_36 PF01817 Chorismate mutase type II DJ92_360 PF02589 LUD domain DJ92_3600 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3600 PF00672 HAMP domain DJ92_3600 PF13426 PAS domain DJ92_3601 PF08239 Bacterial SH3 domain DJ92_3601 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_3602 PF01522 Polysaccharide deacetylase DJ92_3604 PF00672 HAMP domain DJ92_3604 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3604 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3604 PF00989 PAS fold DJ92_3604 PF18698 Histidine kinase sensor domain DJ92_3605 PF17912 MalK OB fold domain DJ92_3605 PF03459 TOBE domain DJ92_3605 PF00005 ABC transporter DJ92_3606 PF03459 TOBE domain DJ92_3606 PF17912 MalK OB fold domain DJ92_3606 PF00005 ABC transporter DJ92_361 PF13183 4Fe-4S dicluster domain DJ92_361 PF02589 LUD domain DJ92_361 PF11870 Domain of unknown function (DUF3390) DJ92_3610 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3611 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_362 PF02754 Cysteine-rich domain DJ92_3623 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_3623 PF12793 Sugar transport-related sRNA regulator N-term DJ92_3625 PF13333 Integrase core domain DJ92_3625 PF00665 Integrase core domain DJ92_3629 PF02733 Dak1 domain DJ92_363 PF03466 LysR substrate binding domain DJ92_363 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_3631 PF02733 Dak1 domain DJ92_3635 PF02687 FtsX-like permease family DJ92_3635 PF12704 MacB-like periplasmic core domain DJ92_3636 PF00005 ABC transporter DJ92_3637 PF00486 Transcriptional regulatory protein, C terminal DJ92_3637 PF00072 Response regulator receiver domain DJ92_3638 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3638 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3639 PF02557 D-alanyl-D-alanine carboxypeptidase DJ92_364 PF12650 Domain of unknown function (DUF3784) DJ92_3641 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3641 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3641 PF00989 PAS fold DJ92_3641 PF16736 Single Cache-like DJ92_3642 PF00486 Transcriptional regulatory protein, C terminal DJ92_3642 PF00072 Response regulator receiver domain DJ92_3644 PF07690 Major Facilitator Superfamily DJ92_3646 PF07729 FCD domain DJ92_3646 PF00392 Bacterial regulatory proteins, gntR family DJ92_3648 PF01906 Putative heavy-metal-binding DJ92_3649 PF01229 Glycosyl hydrolases family 39 DJ92_3650 PF00933 Glycosyl hydrolase family 3 N terminal domain DJ92_3651 PF07859 alpha/beta hydrolase fold DJ92_3652 PF07731 Multicopper oxidase DJ92_3652 PF00394 Multicopper oxidase DJ92_3652 PF07732 Multicopper oxidase DJ92_3654 PF13411 MerR HTH family regulatory protein DJ92_3654 PF06445 GyrI-like small molecule binding domain DJ92_3659 PF11121 Protein of unknown function (DUF2639) DJ92_3663 PF00149 Calcineurin-like phosphoesterase DJ92_3664 PF13514 AAA domain DJ92_3665 PF01336 OB-fold nucleic acid binding domain DJ92_3665 PF01966 HD domain DJ92_3668 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_3670 PF08386 TAP-like protein DJ92_3670 PF00561 alpha/beta hydrolase fold DJ92_3671 PF05547 Immune inhibitor A peptidase M6 DJ92_3672 PF14147 Sporulation protein YhaL DJ92_3673 PF04309 Glycerol-3-phosphate responsive antiterminator DJ92_3674 PF00230 Major intrinsic protein DJ92_3677 PF01266 FAD dependent oxidoreductase DJ92_3677 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DJ92_3681 PF01047 MarR family DJ92_3682 PF12732 YtxH-like protein DJ92_3684 PF01230 HIT domain DJ92_3685 PF00005 ABC transporter DJ92_3686 PF05975 Bacterial ABC transporter protein EcsB DJ92_3687 PF12787 EcsC protein family DJ92_3688 PF00293 NUDIX domain DJ92_3688 PF09297 NADH pyrophosphatase zinc ribbon domain DJ92_3689 PF00561 alpha/beta hydrolase fold DJ92_369 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ92_369 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ92_3690 PF00486 Transcriptional regulatory protein, C terminal DJ92_3690 PF00072 Response regulator receiver domain DJ92_3691 PF00672 HAMP domain DJ92_3691 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3693 PF03703 Bacterial PH domain DJ92_3694 PF03703 Bacterial PH domain DJ92_3696 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_3698 PF00324 Amino acid permease DJ92_3699 PF08239 Bacterial SH3 domain DJ92_3699 PF01183 Glycosyl hydrolases family 25 DJ92_370 PF00144 Beta-lactamase DJ92_3702 PF00144 Beta-lactamase DJ92_3705 PF03703 Bacterial PH domain DJ92_3706 PF03703 Bacterial PH domain DJ92_3708 PF03992 Antibiotic biosynthesis monooxygenase DJ92_3709 PF00912 Transglycosylase DJ92_3709 PF00905 Penicillin binding protein transpeptidase domain DJ92_3710 PF01208 Uroporphyrinogen decarboxylase (URO-D) DJ92_3714 PF14552 Tautomerase enzyme DJ92_3715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_3715 PF03466 LysR substrate binding domain DJ92_3716 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_3716 PF03466 LysR substrate binding domain DJ92_3720 PF00440 Bacterial regulatory proteins, tetR family DJ92_3720 PF17932 Tetracyclin repressor-like, C-terminal domain DJ92_3722 PF10787 Uncharacterised protein from bacillus cereus group DJ92_3724 PF08279 HTH domain DJ92_3724 PF13280 WYL domain DJ92_3725 PF00356 Bacterial regulatory proteins, lacI family DJ92_3726 PF14149 YhfH-like protein DJ92_3727 PF12706 Beta-lactamase superfamily domain DJ92_3728 PF10437 Bacterial lipoate protein ligase C-terminus DJ92_3728 PF03099 Biotin/lipoate A/B protein ligase family DJ92_3729 PF00501 AMP-binding enzyme DJ92_3729 PF13193 AMP-binding enzyme C-terminal domain DJ92_3731 PF00149 Calcineurin-like phosphoesterase DJ92_3733 PF12833 Helix-turn-helix domain DJ92_3733 PF06445 GyrI-like small molecule binding domain DJ92_3734 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3734 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3735 PF00072 Response regulator receiver domain DJ92_3735 PF00486 Transcriptional regulatory protein, C terminal DJ92_3740 PF01435 Peptidase family M48 DJ92_3740 PF16491 CAAX prenyl protease N-terminal, five membrane helices DJ92_3744 PF00892 EamA-like transporter family DJ92_3745 PF01274 Malate synthase DJ92_3746 PF00463 Isocitrate lyase family DJ92_3748 PF00313 'Cold-shock' DNA-binding domain DJ92_3749 PF06338 ComK protein DJ92_3750 PF17802 Prealbumin-like fold domain DJ92_3750 PF05738 Cna protein B-type domain DJ92_3750 PF05737 Collagen binding domain DJ92_3751 PF13426 PAS domain DJ92_3751 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3751 PF00989 PAS fold DJ92_3751 PF13188 PAS domain DJ92_3751 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3752 PF09335 SNARE associated Golgi protein DJ92_3753 PF10502 Signal peptidase, peptidase S26 DJ92_3754 PF12705 PD-(D/E)XK nuclease superfamily DJ92_3754 PF13361 UvrD-like helicase C-terminal domain DJ92_3755 PF13361 UvrD-like helicase C-terminal domain DJ92_3755 PF00580 UvrD/REP helicase N-terminal domain DJ92_3755 PF12705 PD-(D/E)XK nuclease superfamily DJ92_3757 PF10676 Spore germination protein gerPA/gerPF DJ92_3758 PF10970 Spore germination protein GerPE DJ92_3760 PF10737 Spore germination protein GerPC DJ92_3761 PF10803 Spore germination GerPB DJ92_3762 PF10676 Spore germination protein gerPA/gerPF DJ92_3763 PF09388 Spo0E like sporulation regulatory protein DJ92_3764 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ92_3766 PF00202 Aminotransferase class-III DJ92_3769 PF13537 Glutamine amidotransferase domain DJ92_3769 PF00733 Asparagine synthase DJ92_3771 PF07486 Cell Wall Hydrolase DJ92_3773 PF06628 Catalase-related immune-responsive DJ92_3773 PF00199 Catalase DJ92_3774 PF00909 Ammonium Transporter Family DJ92_3775 PF00128 Alpha amylase, catalytic domain DJ92_3777 PF04461 Protein of unknown function (DUF520) DJ92_3778 PF13509 S1 domain DJ92_3778 PF17783 CvfB-like winged helix domain DJ92_3781 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_3781 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_3782 PF12758 Protein of unknown function (DUF3813) DJ92_3785 PF14168 YjzC-like protein DJ92_3786 PF07724 AAA domain (Cdc48 subfamily) DJ92_3786 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_3786 PF17871 AAA lid domain DJ92_3786 PF10431 C-terminal, D2-small domain, of ClpB protein DJ92_3786 PF02861 Clp amino terminal domain, pathogenicity island component DJ92_379 PF00293 NUDIX domain DJ92_379 PF13344 Haloacid dehalogenase-like hydrolase DJ92_3790 PF10815 ComZ DJ92_3791 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ92_3791 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ92_3792 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ92_3792 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ92_3793 PF10026 Predicted Zn-dependent protease (DUF2268) DJ92_3794 PF12227 Protein of unknown function (DUF3603) DJ92_3795 PF00579 tRNA synthetases class I (W and Y) DJ92_3797 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_3798 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3799 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3799 PF12911 N-terminal TM domain of oligopeptide transport permease C DJ92_380 PF00202 Aminotransferase class-III DJ92_3800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ92_3800 PF00005 ABC transporter DJ92_3801 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DJ92_3801 PF00005 ABC transporter DJ92_3802 PF01554 MatE DJ92_3803 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_3805 PF03960 ArsC family DJ92_3806 PF03741 Integral membrane protein TerC family DJ92_3807 PF05389 Negative regulator of genetic competence (MecA) DJ92_3808 PF13396 Phospholipase_D-nuclease N-terminal DJ92_3808 PF13091 PLD-like domain DJ92_3809 PF06054 Competence protein CoiA-like family DJ92_381 PF01820 D-ala D-ala ligase N-terminus DJ92_381 PF07478 D-ala D-ala ligase C-terminus DJ92_3810 PF01432 Peptidase family M3 DJ92_3810 PF08439 Oligopeptidase F DJ92_3813 PF01152 Bacterial-like globin DJ92_3814 PF01928 CYTH domain DJ92_3816 PF04607 Region found in RelA / SpoT proteins DJ92_3817 PF01513 ATP-NAD kinase DJ92_3818 PF00849 RNA pseudouridylate synthase DJ92_3819 PF00149 Calcineurin-like phosphoesterase DJ92_382 PF00392 Bacterial regulatory proteins, gntR family DJ92_382 PF00155 Aminotransferase class I and II DJ92_3820 PF01098 Cell cycle protein DJ92_3823 PF03102 NeuB family DJ92_3823 PF08666 SAF domain DJ92_3824 PF00668 Condensation domain DJ92_3824 PF00550 Phosphopantetheine attachment site DJ92_3824 PF13193 AMP-binding enzyme C-terminal domain DJ92_3824 PF00501 AMP-binding enzyme DJ92_3824 PF00551 Formyl transferase DJ92_3826 PF02348 Cytidylyltransferase DJ92_3827 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DJ92_3828 PF02719 Polysaccharide biosynthesis protein DJ92_3829 PF00535 Glycosyl transferase family 2 DJ92_3831 PF00483 Nucleotidyl transferase DJ92_3832 PF12996 DUF based on E. rectale Gene description (DUF3880) DJ92_3836 PF00535 Glycosyl transferase family 2 DJ92_3839 PF16363 GDP-mannose 4,6 dehydratase DJ92_384 PF17209 Hfq protein DJ92_3840 PF04989 Cephalosporin hydroxylase DJ92_3841 PF00535 Glycosyl transferase family 2 DJ92_3843 PF00483 Nucleotidyl transferase DJ92_3844 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DJ92_3845 PF16363 GDP-mannose 4,6 dehydratase DJ92_3846 PF04321 RmlD substrate binding domain DJ92_385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_385 PF18277 AbrB C-terminal domain DJ92_3850 PF10612 Spore coat protein Z DJ92_3851 PF07098 Protein of unknown function (DUF1360) DJ92_3854 PF13361 UvrD-like helicase C-terminal domain DJ92_3854 PF00580 UvrD/REP helicase N-terminal domain DJ92_3855 PF13673 Acetyltransferase (GNAT) domain DJ92_3857 PF00756 Putative esterase DJ92_3860 PF02368 Bacterial Ig-like domain (group 2) DJ92_3861 PF00474 Sodium:solute symporter family DJ92_3862 PF00425 chorismate binding enzyme DJ92_3862 PF04715 Anthranilate synthase component I, N terminal region DJ92_3863 PF00117 Glutamine amidotransferase class-I DJ92_3866 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase DJ92_387 PF00350 Dynamin family DJ92_3872 PF02652 L-lactate permease DJ92_3873 PF10042 Uncharacterized conserved protein (DUF2278) DJ92_3880 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_3880 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DJ92_3882 PF00881 Nitroreductase family DJ92_3885 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DJ92_3885 PF00364 Biotin-requiring enzyme DJ92_3885 PF02817 e3 binding domain DJ92_3886 PF02779 Transketolase, pyrimidine binding domain DJ92_3886 PF16870 2-oxoglutarate dehydrogenase C-terminal DJ92_3886 PF00676 Dehydrogenase E1 component DJ92_3890 PF06725 3D domain DJ92_3890 PF01476 LysM domain DJ92_3892 PF00884 Sulfatase DJ92_3893 PF13186 Iron-sulfur cluster-binding domain DJ92_3893 PF04055 Radical SAM superfamily DJ92_3897 PF14436 Bacterial EndoU nuclease DJ92_3897 PF04740 LXG domain of WXG superfamily DJ92_3898 PF04740 LXG domain of WXG superfamily DJ92_3898 PF14436 Bacterial EndoU nuclease DJ92_3900 PF00239 Resolvase, N terminal domain DJ92_3900 PF02796 Helix-turn-helix domain of resolvase DJ92_3902 PF04055 Radical SAM superfamily DJ92_391 PF00753 Metallo-beta-lactamase superfamily DJ92_3915 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_3919 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_3919 PF00589 Phage integrase family DJ92_3923 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_3923 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_3926 PF12389 Camelysin metallo-endopeptidase DJ92_3928 PF12389 Camelysin metallo-endopeptidase DJ92_3929 PF01381 Helix-turn-helix DJ92_3929 PF08671 Anti-repressor SinI DJ92_3931 PF05547 Immune inhibitor A peptidase M6 DJ92_3932 PF00171 Aldehyde dehydrogenase family DJ92_3933 PF00005 ABC transporter DJ92_3933 PF08402 TOBE domain DJ92_3934 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3935 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_3936 PF13416 Bacterial extracellular solute-binding protein DJ92_3937 PF01569 PAP2 superfamily DJ92_3938 PF03176 MMPL family DJ92_394 PF17863 AAA lid domain DJ92_394 PF07726 ATPase family associated with various cellular activities (AAA) DJ92_3940 PF01479 S4 domain DJ92_3940 PF00849 RNA pseudouridylate synthase DJ92_3942 PF00188 Cysteine-rich secretory protein family DJ92_3943 PF02754 Cysteine-rich domain DJ92_3943 PF13183 4Fe-4S dicluster domain DJ92_3944 PF01565 FAD binding domain DJ92_3944 PF02913 FAD linked oxidases, C-terminal domain DJ92_3945 PF05651 Putative sugar diacid recognition DJ92_3945 PF13556 PucR C-terminal helix-turn-helix domain DJ92_3945 PF17853 GGDEF-like domain DJ92_3947 PF00072 Response regulator receiver domain DJ92_3947 PF00486 Transcriptional regulatory protein, C terminal DJ92_3948 PF16736 Single Cache-like DJ92_3948 PF00989 PAS fold DJ92_3948 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3948 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3949 PF00392 Bacterial regulatory proteins, gntR family DJ92_3949 PF07729 FCD domain DJ92_3950 PF02754 Cysteine-rich domain DJ92_3951 PF02589 LUD domain DJ92_3951 PF13183 4Fe-4S dicluster domain DJ92_3951 PF11870 Domain of unknown function (DUF3390) DJ92_3952 PF02589 LUD domain DJ92_3953 PF01478 Type IV leader peptidase family DJ92_3953 PF06750 Bacterial Peptidase A24 N-terminal domain DJ92_3955 PF01226 Formate/nitrite transporter DJ92_3956 PF03741 Integral membrane protein TerC family DJ92_3957 PF02386 Cation transport protein DJ92_3958 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_3959 PF01575 MaoC like domain DJ92_3964 PF00561 alpha/beta hydrolase fold DJ92_3966 PF02386 Cation transport protein DJ92_3971 PF00455 DeoR C terminal sensor domain DJ92_3971 PF08220 DeoR-like helix-turn-helix domain DJ92_3972 PF00596 Class II Aldolase and Adducin N-terminal domain DJ92_3974 PF04748 Divergent polysaccharide deacetylase DJ92_3975 PF09388 Spo0E like sporulation regulatory protein DJ92_3976 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3976 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3976 PF02743 Cache domain DJ92_3977 PF01047 MarR family DJ92_3979 PF12867 DinB superfamily DJ92_3981 PF13188 PAS domain DJ92_3981 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_3981 PF00512 His Kinase A (phospho-acceptor) domain DJ92_3981 PF00989 PAS fold DJ92_3981 PF13426 PAS domain DJ92_3982 PF06508 Queuosine biosynthesis protein QueC DJ92_3983 PF01242 6-pyruvoyl tetrahydropterin synthase DJ92_3984 PF04055 Radical SAM superfamily DJ92_3985 PF14489 QueF-like protein DJ92_3986 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DJ92_3989 PF00583 Acetyltransferase (GNAT) family DJ92_399 PF00067 Cytochrome P450 DJ92_3992 PF07972 NrdI Flavodoxin like DJ92_3993 PF08343 Ribonucleotide reductase N-terminal DJ92_3993 PF00317 Ribonucleotide reductase, all-alpha domain DJ92_3993 PF02867 Ribonucleotide reductase, barrel domain DJ92_3995 PF00317 Ribonucleotide reductase, all-alpha domain DJ92_3995 PF02867 Ribonucleotide reductase, barrel domain DJ92_3995 PF08343 Ribonucleotide reductase N-terminal DJ92_3996 PF00268 Ribonucleotide reductase, small chain DJ92_3997 PF00324 Amino acid permease DJ92_3998 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ92_3998 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_4001 PF00158 Sigma-54 interaction domain DJ92_4001 PF00989 PAS fold DJ92_4001 PF02954 Bacterial regulatory protein, Fis family DJ92_4003 PF00202 Aminotransferase class-III DJ92_4004 PF02515 CoA-transferase family III DJ92_4005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_4005 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_4005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_4006 PF00392 Bacterial regulatory proteins, gntR family DJ92_4007 PF00005 ABC transporter DJ92_4009 PF00005 ABC transporter DJ92_4011 PF01235 Sodium:alanine symporter family DJ92_4014 PF01037 Lrp/AsnC ligand binding domain DJ92_4016 PF00857 Isochorismatase family DJ92_4018 PF02016 LD-carboxypeptidase N-terminal domain DJ92_4018 PF17676 LD-carboxypeptidase C-terminal domain DJ92_4019 PF03060 Nitronate monooxygenase DJ92_4020 PF04914 DltD protein DJ92_4021 PF00550 Phosphopantetheine attachment site DJ92_4022 PF03062 MBOAT, membrane-bound O-acyltransferase family DJ92_4023 PF00501 AMP-binding enzyme DJ92_4023 PF13193 AMP-binding enzyme C-terminal domain DJ92_4025 PF07687 Peptidase dimerisation domain DJ92_4025 PF01546 Peptidase family M20/M25/M40 DJ92_4027 PF00258 Flavodoxin DJ92_4030 PF01636 Phosphotransferase enzyme family DJ92_4034 PF01554 MatE DJ92_4035 PF02673 Bacitracin resistance protein BacA DJ92_4038 PF01047 MarR family DJ92_4040 PF02386 Cation transport protein DJ92_4042 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ92_4044 PF03698 Uncharacterised protein family (UPF0180) DJ92_4046 PF01063 Amino-transferase class IV DJ92_4047 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_4047 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_4047 PF00205 Thiamine pyrophosphate enzyme, central domain DJ92_4048 PF10369 Small subunit of acetolactate synthase DJ92_4048 PF01842 ACT domain DJ92_4049 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ92_4049 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ92_405 PF14437 MafB19-like deaminase DJ92_4051 PF00180 Isocitrate/isopropylmalate dehydrogenase DJ92_4052 PF00330 Aconitase family (aconitate hydratase) DJ92_4053 PF00694 Aconitase C-terminal domain DJ92_4054 PF13393 Histidyl-tRNA synthetase DJ92_4055 PF01634 ATP phosphoribosyltransferase DJ92_4056 PF00815 Histidinol dehydrogenase DJ92_4058 PF00117 Glutamine amidotransferase class-I DJ92_4059 PF00977 Histidine biosynthesis protein DJ92_406 PF13977 BetI-type transcriptional repressor, C-terminal DJ92_406 PF00440 Bacterial regulatory proteins, tetR family DJ92_4060 PF00977 Histidine biosynthesis protein DJ92_4061 PF01502 Phosphoribosyl-AMP cyclohydrolase DJ92_4063 PF02811 PHP domain DJ92_4065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DJ92_4065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DJ92_4066 PF01066 CDP-alcohol phosphatidyltransferase DJ92_4067 PF00884 Sulfatase DJ92_4069 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DJ92_4069 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DJ92_4071 PF01507 Phosphoadenosine phosphosulfate reductase family DJ92_4072 PF14306 PUA-like domain DJ92_4072 PF01747 ATP-sulfurylase DJ92_4074 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DJ92_4074 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DJ92_4076 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_4077 PF01903 CbiX DJ92_4078 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DJ92_4078 PF10414 Sirohaem synthase dimerisation region DJ92_4078 PF14824 Sirohaem biosynthesis protein central DJ92_4079 PF00209 Sodium:neurotransmitter symporter family DJ92_408 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4082 PF00375 Sodium:dicarboxylate symporter family DJ92_4084 PF03553 Na+/H+ antiporter family DJ92_4087 PF09922 Cell wall-active antibiotics response 4TMS YvqF DJ92_4088 PF07730 Histidine kinase DJ92_4088 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4088 PF00672 HAMP domain DJ92_4089 PF00072 Response regulator receiver domain DJ92_4089 PF00196 Bacterial regulatory proteins, luxR family DJ92_409 PF00486 Transcriptional regulatory protein, C terminal DJ92_409 PF00072 Response regulator receiver domain DJ92_4091 PF05525 Branched-chain amino acid transport protein DJ92_4092 PF00746 LPXTG cell wall anchor motif DJ92_4092 PF02872 5'-nucleotidase, C-terminal domain DJ92_4092 PF00565 Staphylococcal nuclease homologue DJ92_4092 PF00149 Calcineurin-like phosphoesterase DJ92_4094 PF08241 Methyltransferase domain DJ92_4097 PF00175 Oxidoreductase NAD-binding domain DJ92_4097 PF00970 Oxidoreductase FAD-binding domain DJ92_4097 PF00042 Globin DJ92_41 PF01636 Phosphotransferase enzyme family DJ92_4100 PF01925 Sulfite exporter TauE/SafE DJ92_4101 PF01384 Phosphate transporter family DJ92_4102 PF01865 Protein of unknown function DUF47 DJ92_4103 PF00905 Penicillin binding protein transpeptidase domain DJ92_4103 PF00912 Transglycosylase DJ92_4105 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4105 PF00989 PAS fold DJ92_4105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4106 PF01904 Protein of unknown function DUF72 DJ92_4107 PF07282 Putative transposase DNA-binding domain DJ92_4107 PF01385 Probable transposase DJ92_4107 PF12323 Helix-turn-helix domain DJ92_4109 PF00589 Phage integrase family DJ92_411 PF02687 FtsX-like permease family DJ92_4110 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4110 PF16736 Single Cache-like DJ92_4110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4110 PF00989 PAS fold DJ92_4111 PF01048 Phosphorylase superfamily DJ92_4113 PF03706 Lysylphosphatidylglycerol synthase TM region DJ92_4113 PF09924 Uncharacterised conserved protein (DUF2156) DJ92_4115 PF13047 Protein of unknown function (DUF3907) DJ92_4116 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DJ92_4116 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DJ92_4117 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_4117 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_4118 PF07670 Nucleoside recognition DJ92_4119 PF07670 Nucleoside recognition DJ92_412 PF00005 ABC transporter DJ92_4120 PF00849 RNA pseudouridylate synthase DJ92_4120 PF01479 S4 domain DJ92_4121 PF00578 AhpC/TSA family DJ92_4122 PF05140 ResB-like family DJ92_4123 PF01578 Cytochrome C assembly protein DJ92_4124 PF00072 Response regulator receiver domain DJ92_4124 PF00486 Transcriptional regulatory protein, C terminal DJ92_4125 PF18698 Histidine kinase sensor domain DJ92_4125 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4125 PF00672 HAMP domain DJ92_4125 PF00989 PAS fold DJ92_4126 PF01923 Cobalamin adenosyltransferase DJ92_4127 PF01551 Peptidase family M23 DJ92_4129 PF12822 ECF transporter, substrate-specific component DJ92_4131 PF14493 Helix-turn-helix domain DJ92_4132 PF00271 Helicase conserved C-terminal domain DJ92_4132 PF00270 DEAD/DEAH box helicase DJ92_4133 PF02517 CPBP intramembrane metalloprotease DJ92_4135 PF00149 Calcineurin-like phosphoesterase DJ92_4136 PF02310 B12 binding domain DJ92_4136 PF02607 B12 binding domain DJ92_4136 PF13411 MerR HTH family regulatory protein DJ92_4137 PF05389 Negative regulator of genetic competence (MecA) DJ92_4138 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_4138 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DJ92_414 PF12852 Cupin DJ92_414 PF12833 Helix-turn-helix domain DJ92_4142 PF17763 Glutaminase/Asparaginase C-terminal domain DJ92_4142 PF00710 Asparaginase, N-terminal DJ92_4144 PF02224 Cytidylate kinase DJ92_4145 PF00575 S1 RNA binding domain DJ92_4146 PF01070 FMN-dependent dehydrogenase DJ92_4148 PF00196 Bacterial regulatory proteins, luxR family DJ92_4148 PF00072 Response regulator receiver domain DJ92_4149 PF14140 YpzI-like protein DJ92_4151 PF14045 YIEGIA protein DJ92_4153 PF01926 50S ribosome-binding GTPase DJ92_4153 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DJ92_4154 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DJ92_4154 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DJ92_4156 PF10966 Protein of unknown function (DUF2768) DJ92_4158 PF09547 Stage IV sporulation protein A (spore_IV_A) DJ92_4159 PF00216 Bacterial DNA-binding protein DJ92_4160 PF01227 GTP cyclohydrolase I DJ92_4161 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DJ92_4162 PF01209 ubiE/COQ5 methyltransferase family DJ92_4163 PF00348 Polyprenyl synthetase DJ92_4164 PF00334 Nucleoside diphosphate kinase DJ92_4165 PF01264 Chorismate synthase DJ92_4166 PF01761 3-dehydroquinate synthase DJ92_4168 PF00155 Aminotransferase class I and II DJ92_4169 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DJ92_417 PF02687 FtsX-like permease family DJ92_4171 PF08858 IDEAL domain DJ92_4171 PF08864 UPF0302 domain DJ92_4172 PF10673 Protein of unknown function (DUF2487) DJ92_4173 PF00355 Rieske [2Fe-2S] domain DJ92_4174 PF00033 Cytochrome b/b6/petB DJ92_4175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DJ92_4175 PF00032 Cytochrome b(C-terminal)/b6/petD DJ92_4176 PF07187 Protein of unknown function (DUF1405) DJ92_4179 PF04298 Putative neutral zinc metallopeptidase DJ92_418 PF00005 ABC transporter DJ92_4181 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_4181 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_4182 PF03819 MazG nucleotide pyrophosphohydrolase domain DJ92_4183 PF05173 Dihydrodipicolinate reductase, C-terminus DJ92_4183 PF01113 Dihydrodipicolinate reductase, N-terminus DJ92_4184 PF02142 MGS-like domain DJ92_4185 PF02585 GlcNAc-PI de-N-acetylase DJ92_4186 PF00534 Glycosyl transferases group 1 DJ92_4186 PF13439 Glycosyltransferase Family 4 DJ92_4187 PF01743 Poly A polymerase head domain DJ92_4187 PF13735 tRNA nucleotidyltransferase domain 2 putative DJ92_4187 PF12627 Probable RNA and SrmB- binding site of polymerase A DJ92_4188 PF08279 HTH domain DJ92_4188 PF02237 Biotin protein ligase C terminal domain DJ92_4188 PF03099 Biotin/lipoate A/B protein ligase family DJ92_4189 PF02548 Ketopantoate hydroxymethyltransferase DJ92_4190 PF02569 Pantoate-beta-alanine ligase DJ92_4191 PF02261 Aspartate decarboxylase DJ92_4192 PF13307 Helicase C-terminal domain DJ92_4192 PF04851 Type III restriction enzyme, res subunit DJ92_4192 PF00929 Exonuclease DJ92_4193 PF14084 Protein of unknown function (DUF4264) DJ92_4195 PF00155 Aminotransferase class I and II DJ92_4196 PF07261 Replication initiation and membrane attachment DJ92_4197 PF10576 Iron-sulfur binding domain of endonuclease III DJ92_4197 PF00633 Helix-hairpin-helix motif DJ92_4197 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ92_4199 PF00905 Penicillin binding protein transpeptidase domain DJ92_4199 PF00912 Transglycosylase DJ92_420 PF01476 LysM domain DJ92_420 PF01471 Putative peptidoglycan binding domain DJ92_420 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_4200 PF03838 Recombination protein U DJ92_4201 PF10720 Protein of unknown function (DUF2515) DJ92_4207 PF11122 Inner spore coat protein D DJ92_4208 PF06908 YspA SLOG family DJ92_4209 PF05103 DivIVA protein DJ92_4210 PF01170 Putative RNA methylase family UPF0020 DJ92_4210 PF02926 THUMP domain DJ92_4212 PF13307 Helicase C-terminal domain DJ92_4213 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DJ92_4216 PF00115 Cytochrome C and Quinol oxidase polypeptide I DJ92_4217 PF09125 Cytochrome C oxidase subunit II, transmembrane DJ92_4217 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DJ92_4219 PF00557 Metallopeptidase family M24 DJ92_4220 PF00156 Phosphoribosyl transferase domain DJ92_4221 PF00860 Permease family DJ92_4222 PF04235 Protein of unknown function (DUF418) DJ92_4222 PF07786 Protein of unknown function (DUF1624) DJ92_4223 PF00350 Dynamin family DJ92_4225 PF00583 Acetyltransferase (GNAT) family DJ92_4226 PF10752 Protein of unknown function (DUF2533) DJ92_4227 PF00581 Rhodanese-like domain DJ92_4231 PF03994 Domain of Unknown Function (DUF350) DJ92_4232 PF00690 Cation transporter/ATPase, N-terminus DJ92_4232 PF00689 Cation transporting ATPase, C-terminus DJ92_4233 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DJ92_4233 PF01367 5'-3' exonuclease, C-terminal SAM fold DJ92_4236 PF13193 AMP-binding enzyme C-terminal domain DJ92_4236 PF00501 AMP-binding enzyme DJ92_4237 PF18014 Acetyltransferase (GNAT) domain DJ92_4237 PF13673 Acetyltransferase (GNAT) domain DJ92_4240 PF00892 EamA-like transporter family DJ92_4241 PF13456 Reverse transcriptase-like DJ92_4242 PF01263 Aldose 1-epimerase DJ92_4244 PF13456 Reverse transcriptase-like DJ92_4245 PF10782 Zinc-finger DJ92_4247 PF00313 'Cold-shock' DNA-binding domain DJ92_4248 PF08892 YqcI/YcgG family DJ92_4249 PF01810 LysE type translocator DJ92_425 PF02801 Beta-ketoacyl synthase, C-terminal domain DJ92_425 PF00109 Beta-ketoacyl synthase, N-terminal domain DJ92_4254 PF00474 Sodium:solute symporter family DJ92_4255 PF00202 Aminotransferase class-III DJ92_4256 PF00999 Sodium/hydrogen exchanger family DJ92_4257 PF13411 MerR HTH family regulatory protein DJ92_4257 PF06445 GyrI-like small molecule binding domain DJ92_4259 PF04239 Protein of unknown function (DUF421) DJ92_4260 PF02698 DUF218 domain DJ92_4262 PF00881 Nitroreductase family DJ92_4266 PF00005 ABC transporter DJ92_427 PF00293 NUDIX domain DJ92_4274 PF12181 DNA binding domain of the motility gene repressor (MogR) DJ92_4275 PF00293 NUDIX domain DJ92_4280 PF01738 Dienelactone hydrolase family DJ92_4281 PF03992 Antibiotic biosynthesis monooxygenase DJ92_4282 PF08141 Small acid-soluble spore protein H family DJ92_4291 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_4295 PF01047 MarR family DJ92_4302 PF00392 Bacterial regulatory proteins, gntR family DJ92_4302 PF07729 FCD domain DJ92_4303 PF00892 EamA-like transporter family DJ92_4305 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ92_4305 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ92_4306 PF03773 Predicted permease DJ92_4307 PF09323 Domain of unknown function (DUF1980) DJ92_4308 PF00857 Isochorismatase family DJ92_4309 PF03553 Na+/H+ antiporter family DJ92_431 PF02687 FtsX-like permease family DJ92_4310 PF03741 Integral membrane protein TerC family DJ92_4311 PF10415 Fumarase C C-terminus DJ92_4311 PF00206 Lyase DJ92_4313 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ92_4316 PF01554 MatE DJ92_4318 PF00578 AhpC/TSA family DJ92_4319 PF03814 Potassium-transporting ATPase A subunit DJ92_432 PF00005 ABC transporter DJ92_4321 PF04286 Protein of unknown function (DUF445) DJ92_4326 PF00196 Bacterial regulatory proteins, luxR family DJ92_4326 PF00072 Response regulator receiver domain DJ92_4327 PF13492 GAF domain DJ92_4327 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4327 PF13185 GAF domain DJ92_4327 PF07730 Histidine kinase DJ92_4328 PF00005 ABC transporter DJ92_4332 PF13091 PLD-like domain DJ92_4335 PF00696 Amino acid kinase family DJ92_4337 PF00375 Sodium:dicarboxylate symporter family DJ92_4338 PF10415 Fumarase C C-terminus DJ92_4338 PF00206 Lyase DJ92_4339 PF00390 Malic enzyme, N-terminal domain DJ92_4339 PF03949 Malic enzyme, NAD binding domain DJ92_4340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4341 PF00072 Response regulator receiver domain DJ92_4341 PF08664 YcbB domain DJ92_4343 PF17770 Ribonuclease J C-terminal domain DJ92_4343 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ92_4343 PF00753 Metallo-beta-lactamase superfamily DJ92_4344 PF00176 SNF2 family N-terminal domain DJ92_4344 PF12419 SNF2 Helicase protein DJ92_4344 PF00271 Helicase conserved C-terminal domain DJ92_4346 PF03590 Aspartate-ammonia ligase DJ92_4348 PF00005 ABC transporter DJ92_4348 PF13732 Domain of unknown function (DUF4162) DJ92_4351 PF01040 UbiA prenyltransferase family DJ92_4352 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4352 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4353 PF00486 Transcriptional regulatory protein, C terminal DJ92_4353 PF00072 Response regulator receiver domain DJ92_4354 PF13840 ACT domain DJ92_4354 PF00696 Amino acid kinase family DJ92_4356 PF13761 Domain of unknown function (DUF4166) DJ92_4357 PF14158 YndJ-like protein DJ92_436 PF01609 Transposase DDE domain DJ92_4362 PF10400 Virulence activator alpha C-term DJ92_4362 PF03551 Transcriptional regulator PadR-like family DJ92_4363 PF07690 Major Facilitator Superfamily DJ92_4365 PF09335 SNARE associated Golgi protein DJ92_4366 PF00392 Bacterial regulatory proteins, gntR family DJ92_4366 PF00155 Aminotransferase class I and II DJ92_4367 PF01569 PAP2 superfamily DJ92_4369 PF07690 Major Facilitator Superfamily DJ92_4371 PF03976 Polyphosphate kinase 2 (PPK2) DJ92_4372 PF13167 GTP-binding GTPase N-terminal DJ92_4372 PF01926 50S ribosome-binding GTPase DJ92_4372 PF16360 GTP-binding GTPase Middle Region DJ92_4374 PF07690 Major Facilitator Superfamily DJ92_4375 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_4376 PF01943 Polysaccharide biosynthesis protein DJ92_4376 PF14667 Polysaccharide biosynthesis C-terminal domain DJ92_4377 PF00209 Sodium:neurotransmitter symporter family DJ92_4383 PF00491 Arginase family DJ92_4384 PF01625 Peptide methionine sulfoxide reductase DJ92_4386 PF01063 Amino-transferase class IV DJ92_4387 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_4387 PF00205 Thiamine pyrophosphate enzyme, central domain DJ92_4387 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_4388 PF10369 Small subunit of acetolactate synthase DJ92_4389 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DJ92_4389 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DJ92_4391 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_4391 PF00585 C-terminal regulatory domain of Threonine dehydratase DJ92_4392 PF09587 Bacterial capsule synthesis protein PGA_cap DJ92_4393 PF04474 Protein of unknown function (DUF554) DJ92_4396 PF00005 ABC transporter DJ92_4397 PF00072 Response regulator receiver domain DJ92_4397 PF00486 Transcriptional regulatory protein, C terminal DJ92_4398 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4398 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4398 PF00672 HAMP domain DJ92_4401 PF07690 Major Facilitator Superfamily DJ92_4409 PF00483 Nucleotidyl transferase DJ92_441 PF00589 Phage integrase family DJ92_4411 PF16363 GDP-mannose 4,6 dehydratase DJ92_4412 PF16363 GDP-mannose 4,6 dehydratase DJ92_4414 PF01609 Transposase DDE domain DJ92_4415 PF13091 PLD-like domain DJ92_4418 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DJ92_4423 PF01979 Amidohydrolase family DJ92_4424 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_4425 PF13302 Acetyltransferase (GNAT) domain DJ92_4426 PF00072 Response regulator receiver domain DJ92_4426 PF00486 Transcriptional regulatory protein, C terminal DJ92_4427 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4427 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4429 PF01566 Natural resistance-associated macrophage protein DJ92_4432 PF13302 Acetyltransferase (GNAT) domain DJ92_4433 PF02558 Ketopantoate reductase PanE/ApbA DJ92_4433 PF08546 Ketopantoate reductase PanE/ApbA C terminal DJ92_4435 PF13188 PAS domain DJ92_4435 PF00989 PAS fold DJ92_4435 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4435 PF13426 PAS domain DJ92_4436 PF13520 Amino acid permease DJ92_4437 PF07730 Histidine kinase DJ92_4437 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4437 PF00672 HAMP domain DJ92_4438 PF00196 Bacterial regulatory proteins, luxR family DJ92_4438 PF00072 Response regulator receiver domain DJ92_444 PF01609 Transposase DDE domain DJ92_4442 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ92_4443 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ92_4444 PF04198 Putative sugar-binding domain DJ92_4445 PF01791 DeoC/LacD family aldolase DJ92_4446 PF07662 Na+ dependent nucleoside transporter C-terminus DJ92_4446 PF01773 Na+ dependent nucleoside transporter N-terminus DJ92_4447 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DJ92_4447 PF02885 Glycosyl transferase family, helical bundle domain DJ92_4447 PF00591 Glycosyl transferase family, a/b domain DJ92_4448 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DJ92_4449 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DJ92_4449 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ92_4451 PF01799 [2Fe-2S] binding domain DJ92_4451 PF00111 2Fe-2S iron-sulfur cluster binding domain DJ92_4452 PF02625 XdhC and CoxI family DJ92_4452 PF13478 XdhC Rossmann domain DJ92_4454 PF05979 Bacterial protein of unknown function (DUF896) DJ92_4455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_4455 PF03466 LysR substrate binding domain DJ92_4456 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_4456 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_4457 PF18603 L-amino acid ligase C-terminal domain 2 DJ92_4457 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_4458 PF14398 YheC/D like ATP-grasp DJ92_446 PF01980 tRNA-methyltransferase O DJ92_4460 PF01568 Molydopterin dinucleotide binding domain DJ92_4460 PF00037 4Fe-4S binding domain DJ92_4460 PF00384 Molybdopterin oxidoreductase DJ92_4460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DJ92_4460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ92_4461 PF07849 Protein of unknown function (DUF1641) DJ92_4462 PF10057 Uncharacterized conserved protein (DUF2294) DJ92_4463 PF02634 FdhD/NarQ family DJ92_4464 PF04055 Radical SAM superfamily DJ92_4464 PF06463 Molybdenum Cofactor Synthesis C DJ92_4465 PF01226 Formate/nitrite transporter DJ92_4466 PF00899 ThiF family DJ92_4467 PF03453 MoeA N-terminal region (domain I and II) DJ92_4467 PF03454 MoeA C-terminal region (domain IV) DJ92_4467 PF00994 Probable molybdopterin binding domain DJ92_4468 PF02391 MoaE protein DJ92_447 PF04072 Leucine carboxyl methyltransferase DJ92_4470 PF10609 NUBPL iron-transfer P-loop NTPase DJ92_4472 PF01022 Bacterial regulatory protein, arsR family DJ92_4474 PF00916 Sulfate permease family DJ92_4474 PF01740 STAS domain DJ92_4475 PF00550 Phosphopantetheine attachment site DJ92_4476 PF08274 PhnA Zinc-Ribbon DJ92_4476 PF03831 PhnA domain DJ92_4478 PF05525 Branched-chain amino acid transport protein DJ92_4480 PF04234 CopC domain DJ92_4480 PF05425 Copper resistance protein D DJ92_4480 PF13115 YtkA-like DJ92_4483 PF00892 EamA-like transporter family DJ92_4484 PF03466 LysR substrate binding domain DJ92_4484 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_4485 PF02082 Transcriptional regulator DJ92_4486 PF01323 DSBA-like thioredoxin domain DJ92_4487 PF00881 Nitroreductase family DJ92_4489 PF01594 AI-2E family transporter DJ92_4490 PF00056 lactate/malate dehydrogenase, NAD binding domain DJ92_4490 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DJ92_4491 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ92_4491 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ92_4494 PF12399 Branched-chain amino acid ATP-binding cassette transporter DJ92_4494 PF00005 ABC transporter DJ92_4495 PF00005 ABC transporter DJ92_4496 PF02653 Branched-chain amino acid transport system / permease component DJ92_4503 PF02016 LD-carboxypeptidase N-terminal domain DJ92_4503 PF17676 LD-carboxypeptidase C-terminal domain DJ92_4504 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_4504 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_4508 PF01925 Sulfite exporter TauE/SafE DJ92_4509 PF01978 Sugar-specific transcriptional regulator TrmB DJ92_4509 PF11495 Archaeal transcriptional regulator TrmB DJ92_4510 PF00877 NlpC/P60 family DJ92_4510 PF01476 LysM domain DJ92_4512 PF00664 ABC transporter transmembrane region DJ92_4512 PF00005 ABC transporter DJ92_4513 PF00106 short chain dehydrogenase DJ92_4516 PF02630 SCO1/SenC DJ92_4518 PF01022 Bacterial regulatory protein, arsR family DJ92_4522 PF03965 Penicillinase repressor DJ92_4525 PF02630 SCO1/SenC DJ92_4526 PF01022 Bacterial regulatory protein, arsR family DJ92_4527 PF01758 Sodium Bile acid symporter family DJ92_4528 PF01451 Low molecular weight phosphotyrosine protein phosphatase DJ92_4529 PF06953 Arsenical resistance operon trans-acting repressor ArsD DJ92_453 PF01609 Transposase DDE domain DJ92_4530 PF02374 Anion-transporting ATPase DJ92_4532 PF04439 Streptomycin adenylyltransferase DJ92_4533 PF01522 Polysaccharide deacetylase DJ92_4533 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DJ92_4537 PF03447 Homoserine dehydrogenase, NAD binding domain DJ92_4537 PF00742 Homoserine dehydrogenase DJ92_4537 PF01842 ACT domain DJ92_4538 PF00291 Pyridoxal-phosphate dependent enzyme DJ92_4539 PF00288 GHMP kinases N terminal domain DJ92_4539 PF08544 GHMP kinases C terminal DJ92_4541 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_4542 PF01522 Polysaccharide deacetylase DJ92_4544 PF02308 MgtC family DJ92_4547 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_4548 PF07690 Major Facilitator Superfamily DJ92_4549 PF01810 LysE type translocator DJ92_455 PF02585 GlcNAc-PI de-N-acetylase DJ92_4550 PF00392 Bacterial regulatory proteins, gntR family DJ92_4550 PF00155 Aminotransferase class I and II DJ92_4552 PF04294 VanW like protein DJ92_4553 PF01734 Patatin-like phospholipase DJ92_4557 PF00293 NUDIX domain DJ92_4559 PF02540 NAD synthase DJ92_456 PF08830 Protein of unknown function (DUF1806) DJ92_4560 PF02687 FtsX-like permease family DJ92_4561 PF03176 MMPL family DJ92_4562 PF00082 Subtilase family DJ92_4563 PF01022 Bacterial regulatory protein, arsR family DJ92_4564 PF00248 Aldo/keto reductase family DJ92_457 PF03600 Citrate transporter DJ92_4570 PF03193 RsgA GTPase DJ92_4574 PF00210 Ferritin-like domain DJ92_4577 PF00296 Luciferase-like monooxygenase DJ92_4579 PF01593 Flavin containing amine oxidoreductase DJ92_4582 PF00248 Aldo/keto reductase family DJ92_4583 PF02492 CobW/HypB/UreG, nucleotide-binding domain DJ92_4583 PF07683 Cobalamin synthesis protein cobW C-terminal domain DJ92_4586 PF01297 Zinc-uptake complex component A periplasmic DJ92_4588 PF13460 NAD(P)H-binding DJ92_4589 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ92_4590 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ92_4590 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ92_4592 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_4593 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_4595 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_4597 PF08757 CotH kinase protein DJ92_4599 PF00293 NUDIX domain DJ92_460 PF05675 Protein of unknown function (DUF817) DJ92_4600 PF09335 SNARE associated Golgi protein DJ92_4601 PF14667 Polysaccharide biosynthesis C-terminal domain DJ92_4601 PF01943 Polysaccharide biosynthesis protein DJ92_4603 PF03773 Predicted permease DJ92_4604 PF09323 Domain of unknown function (DUF1980) DJ92_4605 PF03061 Thioesterase superfamily DJ92_4606 PF13091 PLD-like domain DJ92_4608 PF00106 short chain dehydrogenase DJ92_461 PF03466 LysR substrate binding domain DJ92_461 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_4610 PF13460 NAD(P)H-binding DJ92_4611 PF04306 Protein of unknown function (DUF456) DJ92_4612 PF01595 Cyclin M transmembrane N-terminal domain DJ92_4612 PF03471 Transporter associated domain DJ92_4612 PF00571 CBS domain DJ92_4615 PF05525 Branched-chain amino acid transport protein DJ92_4616 PF01588 Putative tRNA binding domain DJ92_462 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_462 PF00107 Zinc-binding dehydrogenase DJ92_4620 PF07454 Stage II sporulation protein P (SpoIIP) DJ92_4622 PF02557 D-alanyl-D-alanine carboxypeptidase DJ92_4623 PF00293 NUDIX domain DJ92_4624 PF01425 Amidase DJ92_4625 PF07690 Major Facilitator Superfamily DJ92_4627 PF01145 SPFH domain / Band 7 family DJ92_4628 PF07454 Stage II sporulation protein P (SpoIIP) DJ92_4629 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DJ92_4629 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DJ92_4631 PF06574 FAD synthetase DJ92_4632 PF06052 3-hydroxyanthranilic acid dioxygenase DJ92_4634 PF01042 Endoribonuclease L-PSP DJ92_4635 PF00171 Aldehyde dehydrogenase family DJ92_4636 PF01557 Fumarylacetoacetate (FAA) hydrolase family DJ92_4637 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation DJ92_4637 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ92_4638 PF00682 HMGL-like DJ92_4638 PF07836 DmpG-like communication domain DJ92_464 PF00488 MutS domain V DJ92_464 PF01713 Smr domain DJ92_4640 PF01361 Tautomerase enzyme DJ92_4641 PF01047 MarR family DJ92_4642 PF07690 Major Facilitator Superfamily DJ92_4643 PF01168 Alanine racemase, N-terminal domain DJ92_4643 PF00842 Alanine racemase, C-terminal domain DJ92_4646 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_4646 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_4647 PF00392 Bacterial regulatory proteins, gntR family DJ92_4647 PF00155 Aminotransferase class I and II DJ92_465 PF00797 N-acetyltransferase DJ92_4659 PF08817 WXG100 protein secretion system (Wss), protein YukD DJ92_4660 PF10140 WXG100 protein secretion system (Wss), protein YukC DJ92_4661 PF01580 FtsK/SpoIIIE family DJ92_4661 PF12538 DNA transporter DJ92_4677 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_4677 PF18277 AbrB C-terminal domain DJ92_4679 PF00665 Integrase core domain DJ92_4679 PF13276 HTH-like domain DJ92_4679 PF13333 Integrase core domain DJ92_4683 PF00005 ABC transporter DJ92_4683 PF13732 Domain of unknown function (DUF4162) DJ92_4684 PF01061 ABC-2 type transporter DJ92_469 PF07969 Amidohydrolase family DJ92_4691 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DJ92_4696 PF01209 ubiE/COQ5 methyltransferase family DJ92_4697 PF01268 Formate--tetrahydrofolate ligase DJ92_4699 PF00271 Helicase conserved C-terminal domain DJ92_4699 PF00270 DEAD/DEAH box helicase DJ92_47 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_470 PF00202 Aminotransferase class-III DJ92_4701 PF00107 Zinc-binding dehydrogenase DJ92_4701 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_4702 PF08281 Sigma-70, region 4 DJ92_4702 PF04542 Sigma-70 region 2 DJ92_4705 PF00753 Metallo-beta-lactamase superfamily DJ92_4707 PF00255 Glutathione peroxidase DJ92_4708 PF00453 Ribosomal protein L20 DJ92_4709 PF05076 Suppressor of fused protein (SUFU) DJ92_4710 PF04740 LXG domain of WXG superfamily DJ92_4710 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues DJ92_4710 PF14449 Pre-toxin TG DJ92_4711 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_4716 PF18593 CdiI immunity protein DJ92_4718 PF04740 LXG domain of WXG superfamily DJ92_4718 PF14436 Bacterial EndoU nuclease DJ92_4722 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DJ92_4722 PF13457 GW (Gly-Tryp) dipeptide domain DJ92_4727 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_4728 PF00082 Subtilase family DJ92_473 PF01554 MatE DJ92_4730 PF00665 Integrase core domain DJ92_4730 PF13333 Integrase core domain DJ92_4730 PF13276 HTH-like domain DJ92_4731 PF13276 HTH-like domain DJ92_4731 PF00665 Integrase core domain DJ92_4731 PF13333 Integrase core domain DJ92_4732 PF18593 CdiI immunity protein DJ92_4733 PF14436 Bacterial EndoU nuclease DJ92_4733 PF04740 LXG domain of WXG superfamily DJ92_4735 PF01966 HD domain DJ92_4736 PF00005 ABC transporter DJ92_4736 PF16326 ABC transporter C-terminal domain DJ92_4736 PF12848 ABC transporter DJ92_4738 PF00436 Single-strand binding protein family DJ92_4742 PF08712 Scaffold protein Nfu/NifU N terminal DJ92_4742 PF13769 Virulence factor DJ92_4744 PF06491 Disulphide isomerase DJ92_4745 PF04445 Putative SAM-dependent methyltransferase DJ92_4746 PF03485 Arginyl tRNA synthetase N terminal domain DJ92_4746 PF05746 DALR anticodon binding domain DJ92_4746 PF00750 tRNA synthetases class I (R) DJ92_4749 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_4749 PF00205 Thiamine pyrophosphate enzyme, central domain DJ92_4749 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_4756 PF01040 UbiA prenyltransferase family DJ92_4763 PF02645 Uncharacterised protein, DegV family COG1307 DJ92_4764 PF07690 Major Facilitator Superfamily DJ92_4767 PF00133 tRNA synthetases class I (I, L, M and V) DJ92_4767 PF08264 Anticodon-binding domain of tRNA DJ92_4770 PF00440 Bacterial regulatory proteins, tetR family DJ92_4772 PF01494 FAD binding domain DJ92_4774 PF01336 OB-fold nucleic acid binding domain DJ92_4774 PF00152 tRNA synthetases class II (D, K and N) DJ92_4775 PF00209 Sodium:neurotransmitter symporter family DJ92_4778 PF00005 ABC transporter DJ92_4779 PF00196 Bacterial regulatory proteins, luxR family DJ92_4779 PF00072 Response regulator receiver domain DJ92_478 PF08439 Oligopeptidase F DJ92_478 PF01432 Peptidase family M3 DJ92_4780 PF00561 alpha/beta hydrolase fold DJ92_4782 PF13419 Haloacid dehalogenase-like hydrolase DJ92_4784 PF00465 Iron-containing alcohol dehydrogenase DJ92_4786 PF01177 Asp/Glu/Hydantoin racemase DJ92_4787 PF01980 tRNA-methyltransferase O DJ92_4788 PF00583 Acetyltransferase (GNAT) family DJ92_479 PF00144 Beta-lactamase DJ92_4791 PF00005 ABC transporter DJ92_4793 PF14005 YpjP-like protein DJ92_4794 PF13419 Haloacid dehalogenase-like hydrolase DJ92_4796 PF00144 Beta-lactamase DJ92_4796 PF07930 D-aminopeptidase, domain B DJ92_4797 PF00303 Thymidylate synthase DJ92_4798 PF00186 Dihydrofolate reductase DJ92_4799 PF05223 NTF2-like N-terminal transpeptidase domain DJ92_4799 PF03717 Penicillin-binding Protein dimerisation domain DJ92_4799 PF00905 Penicillin binding protein transpeptidase domain DJ92_4800 PF02525 Flavodoxin-like fold DJ92_4802 PF03006 Haemolysin-III related DJ92_4803 PF02416 mttA/Hcf106 family DJ92_4804 PF00902 Sec-independent protein translocase protein (TatC) DJ92_4806 PF02645 Uncharacterised protein, DegV family COG1307 DJ92_4808 PF02630 SCO1/SenC DJ92_4809 PF00011 Hsp20/alpha crystallin family DJ92_481 PF02696 Uncharacterized ACR, YdiU/UPF0061 family DJ92_4810 PF13537 Glutamine amidotransferase domain DJ92_4810 PF00733 Asparagine synthase DJ92_4813 PF01520 N-acetylmuramoyl-L-alanine amidase DJ92_4813 PF05036 Sporulation related domain DJ92_4814 PF01497 Periplasmic binding protein DJ92_4815 PF01063 Amino-transferase class IV DJ92_4818 PF06445 GyrI-like small molecule binding domain DJ92_4818 PF12833 Helix-turn-helix domain DJ92_4819 PF00857 Isochorismatase family DJ92_4820 PF07730 Histidine kinase DJ92_4820 PF13185 GAF domain DJ92_4821 PF00196 Bacterial regulatory proteins, luxR family DJ92_4821 PF00072 Response regulator receiver domain DJ92_4824 PF03358 NADPH-dependent FMN reductase DJ92_483 PF07537 CamS sex pheromone cAM373 precursor DJ92_4830 PF00005 ABC transporter DJ92_4830 PF00571 CBS domain DJ92_4831 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_4832 PF13520 Amino acid permease DJ92_4837 PF03063 Prismane/CO dehydrogenase family DJ92_4839 PF01595 Cyclin M transmembrane N-terminal domain DJ92_4839 PF03471 Transporter associated domain DJ92_4839 PF00571 CBS domain DJ92_484 PF02687 FtsX-like permease family DJ92_484 PF12704 MacB-like periplasmic core domain DJ92_4840 PF07997 Protein of unknown function (DUF1694) DJ92_4841 PF09385 Histidine kinase N terminal DJ92_4844 PF03459 TOBE domain DJ92_4844 PF17912 MalK OB fold domain DJ92_4844 PF00005 ABC transporter DJ92_4845 PF13556 PucR C-terminal helix-turn-helix domain DJ92_4846 PF00202 Aminotransferase class-III DJ92_4847 PF01144 Coenzyme A transferase DJ92_4848 PF01144 Coenzyme A transferase DJ92_4849 PF07687 Peptidase dimerisation domain DJ92_4849 PF01546 Peptidase family M20/M25/M40 DJ92_485 PF00005 ABC transporter DJ92_4850 PF00583 Acetyltransferase (GNAT) family DJ92_4851 PF02954 Bacterial regulatory protein, Fis family DJ92_4851 PF00158 Sigma-54 interaction domain DJ92_4851 PF13426 PAS domain DJ92_4852 PF12544 Lysine-2,3-aminomutase DJ92_4853 PF14122 YokU-like protein, putative antitoxin DJ92_4854 PF06855 YozE SAM-like fold DJ92_4857 PF14162 YozD-like protein DJ92_4859 PF00069 Protein kinase domain DJ92_4859 PF08239 Bacterial SH3 domain DJ92_4860 PF07070 SpoOM protein DJ92_4861 PF01545 Cation efflux family DJ92_4861 PF16916 Dimerisation domain of Zinc Transporter DJ92_4862 PF01569 PAP2 superfamily DJ92_4864 PF00085 Thioredoxin DJ92_4868 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_4870 PF04740 LXG domain of WXG superfamily DJ92_4870 PF14436 Bacterial EndoU nuclease DJ92_4880 PF00692 dUTPase DJ92_4885 PF01609 Transposase DDE domain DJ92_489 PF01609 Transposase DDE domain DJ92_4890 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_4893 PF00293 NUDIX domain DJ92_4897 PF08803 Putative mono-oxygenase ydhR DJ92_4903 PF13732 Domain of unknown function (DUF4162) DJ92_4903 PF00005 ABC transporter DJ92_4904 PF01061 ABC-2 type transporter DJ92_4906 PF07690 Major Facilitator Superfamily DJ92_4907 PF00550 Phosphopantetheine attachment site DJ92_4907 PF00668 Condensation domain DJ92_4907 PF00501 AMP-binding enzyme DJ92_4907 PF13193 AMP-binding enzyme C-terminal domain DJ92_4908 PF00550 Phosphopantetheine attachment site DJ92_4908 PF00501 AMP-binding enzyme DJ92_4908 PF00668 Condensation domain DJ92_4908 PF07993 Male sterility protein DJ92_4908 PF13193 AMP-binding enzyme C-terminal domain DJ92_4909 PF00668 Condensation domain DJ92_4909 PF00550 Phosphopantetheine attachment site DJ92_4909 PF13193 AMP-binding enzyme C-terminal domain DJ92_4909 PF00501 AMP-binding enzyme DJ92_4910 PF01648 4'-phosphopantetheinyl transferase superfamily DJ92_4911 PF00975 Thioesterase domain DJ92_4913 PF09335 SNARE associated Golgi protein DJ92_4921 PF00930 Dipeptidyl peptidase IV (DPP IV) N-terminal region DJ92_4921 PF00326 Prolyl oligopeptidase family DJ92_4922 PF00072 Response regulator receiver domain DJ92_4922 PF00486 Transcriptional regulatory protein, C terminal DJ92_4923 PF00672 HAMP domain DJ92_4923 PF00512 His Kinase A (phospho-acceptor) domain DJ92_4923 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_4926 PF00905 Penicillin binding protein transpeptidase domain DJ92_4926 PF00912 Transglycosylase DJ92_4929 PF00285 Citrate synthase, C-terminal domain DJ92_493 PF07969 Amidohydrolase family DJ92_4930 PF03972 MmgE/PrpD family DJ92_4932 PF00989 PAS fold DJ92_4932 PF02954 Bacterial regulatory protein, Fis family DJ92_4932 PF00158 Sigma-54 interaction domain DJ92_4933 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_4933 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_4933 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_4934 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ92_4934 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ92_4935 PF00171 Aldehyde dehydrogenase family DJ92_4936 PF01810 LysE type translocator DJ92_4938 PF00378 Enoyl-CoA hydratase/isomerase DJ92_4940 PF10763 Protein of unknown function (DUF2584) DJ92_4941 PF00149 Calcineurin-like phosphoesterase DJ92_4941 PF12320 Type 5 capsule protein repressor C-terminal domain DJ92_4942 PF13476 AAA domain DJ92_4943 PF00106 short chain dehydrogenase DJ92_4944 PF00425 chorismate binding enzyme DJ92_4945 PF00501 AMP-binding enzyme DJ92_4945 PF13193 AMP-binding enzyme C-terminal domain DJ92_4946 PF00857 Isochorismatase family DJ92_4946 PF00550 Phosphopantetheine attachment site DJ92_4947 PF13193 AMP-binding enzyme C-terminal domain DJ92_4947 PF00668 Condensation domain DJ92_4947 PF00501 AMP-binding enzyme DJ92_4947 PF00975 Thioesterase domain DJ92_4947 PF00550 Phosphopantetheine attachment site DJ92_4948 PF03621 MbtH-like protein DJ92_4949 PF07690 Major Facilitator Superfamily DJ92_4952 PF00216 Bacterial DNA-binding protein DJ92_4954 PF05163 DinB family DJ92_4956 PF01235 Sodium:alanine symporter family DJ92_4961 PF16291 Domain of unknown function (DUF4937 DJ92_4962 PF00849 RNA pseudouridylate synthase DJ92_4962 PF01479 S4 domain DJ92_4963 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_4963 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_4963 PF02824 TGS domain DJ92_4963 PF03129 Anticodon binding domain DJ92_4964 PF00005 ABC transporter DJ92_4966 PF13411 MerR HTH family regulatory protein DJ92_4967 PF00561 alpha/beta hydrolase fold DJ92_4967 PF00106 short chain dehydrogenase DJ92_497 PF01062 Bestrophin, RFP-TM, chloride channel DJ92_4976 PF13005 zinc-finger binding domain of transposase IS66 DJ92_4976 PF13007 Transposase C of IS166 homeodomain DJ92_4976 PF03050 Transposase IS66 family DJ92_4976 PF13817 IS66 C-terminal element DJ92_4985 PF03838 Recombination protein U DJ92_4998 PF00392 Bacterial regulatory proteins, gntR family DJ92_4998 PF07840 FadR C-terminal domain DJ92_500 PF10502 Signal peptidase, peptidase S26 DJ92_5001 PF00589 Phage integrase family DJ92_5001 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_5004 PF00205 Thiamine pyrophosphate enzyme, central domain DJ92_5004 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_5004 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DJ92_5006 PF07690 Major Facilitator Superfamily DJ92_5009 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_5010 PF00171 Aldehyde dehydrogenase family DJ92_5011 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_5012 PF00583 Acetyltransferase (GNAT) family DJ92_5016 PF13302 Acetyltransferase (GNAT) domain DJ92_5018 PF00313 'Cold-shock' DNA-binding domain DJ92_5021 PF01047 MarR family DJ92_5022 PF07690 Major Facilitator Superfamily DJ92_5023 PF03466 LysR substrate binding domain DJ92_5023 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_5024 PF00202 Aminotransferase class-III DJ92_5025 PF03475 3-alpha domain DJ92_5025 PF03473 MOSC domain DJ92_5026 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DJ92_5026 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ92_5027 PF04199 Putative cyclase DJ92_5028 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DJ92_5028 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DJ92_503 PF08478 POTRA domain, FtsQ-type DJ92_5030 PF00005 ABC transporter DJ92_5030 PF00664 ABC transporter transmembrane region DJ92_5031 PF00664 ABC transporter transmembrane region DJ92_5031 PF00005 ABC transporter DJ92_5036 PF00583 Acetyltransferase (GNAT) family DJ92_5037 PF01373 Glycosyl hydrolase family 14 DJ92_5037 PF00686 Starch binding domain DJ92_5038 PF00890 FAD binding domain DJ92_5039 PF04542 Sigma-70 region 2 DJ92_5039 PF08281 Sigma-70, region 4 DJ92_5042 PF13193 AMP-binding enzyme C-terminal domain DJ92_5042 PF00501 AMP-binding enzyme DJ92_5045 PF14748 Pyrroline-5-carboxylate reductase dimerisation DJ92_5045 PF03807 NADP oxidoreductase coenzyme F420-dependent DJ92_5046 PF01472 PUA domain DJ92_5046 PF00696 Amino acid kinase family DJ92_5047 PF00171 Aldehyde dehydrogenase family DJ92_5048 PF02638 Glycosyl hydrolase-like 10 DJ92_505 PF01565 FAD binding domain DJ92_505 PF02913 FAD linked oxidases, C-terminal domain DJ92_5050 PF02378 Phosphotransferase system, EIIC DJ92_5051 PF03702 Anhydro-N-acetylmuramic acid kinase DJ92_5052 PF01869 BadF/BadG/BcrA/BcrD ATPase family DJ92_5054 PF02660 Glycerol-3-phosphate acyltransferase DJ92_5059 PF00270 DEAD/DEAH box helicase DJ92_5059 PF00271 Helicase conserved C-terminal domain DJ92_506 PF03691 Uncharacterised protein family (UPF0167) DJ92_5060 PF16925 Tetracyclin repressor-like, C-terminal domain DJ92_5060 PF00440 Bacterial regulatory proteins, tetR family DJ92_5064 PF00300 Histidine phosphatase superfamily (branch 1) DJ92_5065 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DJ92_5069 PF07687 Peptidase dimerisation domain DJ92_5069 PF01546 Peptidase family M20/M25/M40 DJ92_5070 PF00149 Calcineurin-like phosphoesterase DJ92_5072 PF00005 ABC transporter DJ92_5074 PF00440 Bacterial regulatory proteins, tetR family DJ92_5074 PF08359 YsiA-like protein, C-terminal region DJ92_5075 PF00589 Phage integrase family DJ92_5075 PF14659 Phage integrase, N-terminal SAM-like domain DJ92_508 PF00269 Small, acid-soluble spore proteins, alpha/beta type DJ92_5080 PF00005 ABC transporter DJ92_5082 PF00392 Bacterial regulatory proteins, gntR family DJ92_5085 PF10946 Protein of unknown function DUF2625 DJ92_5087 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DJ92_5087 PF02770 Acyl-CoA dehydrogenase, middle domain DJ92_5087 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DJ92_5088 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_5088 PF00289 Biotin carboxylase, N-terminal domain DJ92_5088 PF02785 Biotin carboxylase C-terminal domain DJ92_5089 PF00364 Biotin-requiring enzyme DJ92_5090 PF00682 HMGL-like DJ92_5091 PF00378 Enoyl-CoA hydratase/isomerase DJ92_5092 PF01039 Carboxyl transferase domain DJ92_5093 PF16177 Acetyl-coenzyme A synthetase N-terminus DJ92_5093 PF00501 AMP-binding enzyme DJ92_5093 PF13193 AMP-binding enzyme C-terminal domain DJ92_5095 PF01613 Flavin reductase like domain DJ92_5098 PF05163 DinB family DJ92_51 PF01381 Helix-turn-helix DJ92_5100 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 DJ92_5100 PF00535 Glycosyl transferase family 2 DJ92_5101 PF00768 D-alanyl-D-alanine carboxypeptidase DJ92_5101 PF07943 Penicillin-binding protein 5, C-terminal domain DJ92_5102 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5102 PF00989 PAS fold DJ92_5102 PF16736 Single Cache-like DJ92_5102 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5103 PF00486 Transcriptional regulatory protein, C terminal DJ92_5103 PF00072 Response regulator receiver domain DJ92_5104 PF01048 Phosphorylase superfamily DJ92_5111 PF00892 EamA-like transporter family DJ92_5112 PF00392 Bacterial regulatory proteins, gntR family DJ92_5112 PF00155 Aminotransferase class I and II DJ92_5116 PF10676 Spore germination protein gerPA/gerPF DJ92_512 PF04294 VanW like protein DJ92_5120 PF01569 PAP2 superfamily DJ92_5121 PF00392 Bacterial regulatory proteins, gntR family DJ92_5121 PF00155 Aminotransferase class I and II DJ92_5122 PF04239 Protein of unknown function (DUF421) DJ92_5124 PF00344 SecY translocase DJ92_5125 PF00797 N-acetyltransferase DJ92_5127 PF01266 FAD dependent oxidoreductase DJ92_5129 PF01541 GIY-YIG catalytic domain DJ92_5131 PF02673 Bacitracin resistance protein BacA DJ92_5136 PF08000 Bacterial PH domain DJ92_5137 PF01734 Patatin-like phospholipase DJ92_514 PF13039 Protein of unknown function (DUF3900) DJ92_514 PF13037 Domain of unknown function (DUF3898) DJ92_5140 PF09234 Domain of unknown function (DUF1963) DJ92_5143 PF05139 Erythromycin esterase DJ92_5147 PF00293 NUDIX domain DJ92_5149 PF07690 Major Facilitator Superfamily DJ92_515 PF13439 Glycosyltransferase Family 4 DJ92_515 PF00534 Glycosyl transferases group 1 DJ92_5153 PF13344 Haloacid dehalogenase-like hydrolase DJ92_5153 PF00293 NUDIX domain DJ92_5156 PF04229 GrpB protein DJ92_5158 PF00561 alpha/beta hydrolase fold DJ92_5159 PF03009 Glycerophosphoryl diester phosphodiesterase family DJ92_5160 PF07690 Major Facilitator Superfamily DJ92_5164 PF13302 Acetyltransferase (GNAT) domain DJ92_5167 PF02675 S-adenosylmethionine decarboxylase DJ92_5170 PF01569 PAP2 superfamily DJ92_5171 PF18719 ArlS sensor domain DJ92_5171 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5171 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5172 PF00486 Transcriptional regulatory protein, C terminal DJ92_5172 PF00072 Response regulator receiver domain DJ92_5174 PF04229 GrpB protein DJ92_5176 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5181 PF12558 ATP-binding cassette cobalt transporter DJ92_5181 PF00005 ABC transporter DJ92_5182 PF07155 ECF-type riboflavin transporter, S component DJ92_5183 PF01177 Asp/Glu/Hydantoin racemase DJ92_5184 PF13188 PAS domain DJ92_5184 PF00989 PAS fold DJ92_5184 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5184 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5184 PF13426 PAS domain DJ92_5186 PF00067 Cytochrome P450 DJ92_5188 PF07561 Domain of Unknown Function (DUF1540) DJ92_5190 PF00132 Bacterial transferase hexapeptide (six repeats) DJ92_5191 PF07690 Major Facilitator Superfamily DJ92_5192 PF00067 Cytochrome P450 DJ92_5198 PF01636 Phosphotransferase enzyme family DJ92_5199 PF13026 Protein of unknown function (DUF3887) DJ92_5199 PF12146 Serine aminopeptidase, S33 DJ92_52 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_5200 PF03070 TENA/THI-4/PQQC family DJ92_5203 PF03447 Homoserine dehydrogenase, NAD binding domain DJ92_5203 PF00742 Homoserine dehydrogenase DJ92_5206 PF02687 FtsX-like permease family DJ92_5207 PF00005 ABC transporter DJ92_5208 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5209 PF00486 Transcriptional regulatory protein, C terminal DJ92_5209 PF00072 Response regulator receiver domain DJ92_5211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5211 PF07730 Histidine kinase DJ92_5212 PF00196 Bacterial regulatory proteins, luxR family DJ92_5212 PF00072 Response regulator receiver domain DJ92_5213 PF01209 ubiE/COQ5 methyltransferase family DJ92_5215 PF07486 Cell Wall Hydrolase DJ92_5217 PF01921 tRNA synthetases class I (K) DJ92_5218 PF08450 SMP-30/Gluconolactonase/LRE-like region DJ92_522 PF01385 Probable transposase DJ92_522 PF12323 Helix-turn-helix domain DJ92_522 PF07282 Putative transposase DNA-binding domain DJ92_5223 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DJ92_5224 PF03413 Peptidase propeptide and YPEB domain DJ92_5224 PF14620 YpeB sporulation DJ92_5225 PF07486 Cell Wall Hydrolase DJ92_5225 PF01471 Putative peptidoglycan binding domain DJ92_5229 PF13419 Haloacid dehalogenase-like hydrolase DJ92_5230 PF03301 Tryptophan 2,3-dioxygenase DJ92_5231 PF04199 Putative cyclase DJ92_5232 PF00266 Aminotransferase class-V DJ92_5233 PF08359 YsiA-like protein, C-terminal region DJ92_5233 PF00440 Bacterial regulatory proteins, tetR family DJ92_5234 PF13344 Haloacid dehalogenase-like hydrolase DJ92_5234 PF00293 NUDIX domain DJ92_5237 PF13302 Acetyltransferase (GNAT) domain DJ92_5238 PF02779 Transketolase, pyrimidine binding domain DJ92_5238 PF02780 Transketolase, C-terminal domain DJ92_5239 PF00106 short chain dehydrogenase DJ92_524 PF00313 'Cold-shock' DNA-binding domain DJ92_5245 PF00528 Binding-protein-dependent transport system inner membrane component DJ92_5246 PF00571 CBS domain DJ92_5246 PF00005 ABC transporter DJ92_5247 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DJ92_5248 PF00574 Clp protease DJ92_5253 PF13673 Acetyltransferase (GNAT) domain DJ92_5256 PF10990 Protein of unknown function (DUF2809) DJ92_526 PF00293 NUDIX domain DJ92_5263 PF03848 Tellurite resistance protein TehB DJ92_5263 PF09313 Domain of unknown function (DUF1971) DJ92_5271 PF00144 Beta-lactamase DJ92_5277 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ92_5278 PF05791 Bacillus haemolytic enterotoxin (HBL) DJ92_528 PF01814 Hemerythrin HHE cation binding domain DJ92_528 PF04405 Domain of Unknown function (DUF542) DJ92_5281 PF00882 Zinc dependent phospholipase C DJ92_5283 PF17874 MalT-like TPR region DJ92_5283 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_5284 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ92_5284 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ92_5284 PF03413 Peptidase propeptide and YPEB domain DJ92_5284 PF01447 Thermolysin metallopeptidase, catalytic domain DJ92_5285 PF13538 UvrD-like helicase C-terminal domain DJ92_5286 PF00296 Luciferase-like monooxygenase DJ92_5288 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DJ92_5289 PF00271 Helicase conserved C-terminal domain DJ92_5289 PF00570 HRDC domain DJ92_5289 PF16124 RecQ zinc-binding DJ92_5289 PF09382 RQC domain DJ92_5289 PF00270 DEAD/DEAH box helicase DJ92_529 PF00106 short chain dehydrogenase DJ92_5290 PF03466 LysR substrate binding domain DJ92_5290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_5294 PF01368 DHH family DJ92_5294 PF02833 DHHA2 domain DJ92_5295 PF12697 Alpha/beta hydrolase family DJ92_5296 PF01235 Sodium:alanine symporter family DJ92_5297 PF00171 Aldehyde dehydrogenase family DJ92_5298 PF00701 Dihydrodipicolinate synthetase family DJ92_5299 PF05544 Proline racemase DJ92_53 PF07690 Major Facilitator Superfamily DJ92_5300 PF05544 Proline racemase DJ92_5301 PF01266 FAD dependent oxidoreductase DJ92_5302 PF02954 Bacterial regulatory protein, Fis family DJ92_5302 PF13188 PAS domain DJ92_5302 PF00158 Sigma-54 interaction domain DJ92_5303 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_5303 PF04324 BFD-like [2Fe-2S] binding domain DJ92_5305 PF07992 Pyridine nucleotide-disulphide oxidoreductase DJ92_5305 PF04324 BFD-like [2Fe-2S] binding domain DJ92_5308 PF08876 Domain of unknown function (DUF1836) DJ92_531 PF14698 Argininosuccinate lyase C-terminal DJ92_531 PF00206 Lyase DJ92_5312 PF09335 SNARE associated Golgi protein DJ92_5315 PF04914 DltD protein DJ92_5318 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_5319 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DJ92_5319 PF00877 NlpC/P60 family DJ92_5320 PF13378 Enolase C-terminal domain-like DJ92_5320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DJ92_5324 PF00248 Aldo/keto reductase family DJ92_5327 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DJ92_5327 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DJ92_5329 PF07486 Cell Wall Hydrolase DJ92_5330 PF00672 HAMP domain DJ92_5330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5330 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5331 PF00486 Transcriptional regulatory protein, C terminal DJ92_5331 PF00072 Response regulator receiver domain DJ92_5334 PF01048 Phosphorylase superfamily DJ92_5335 PF03808 Glycosyl transferase WecB/TagA/CpsF family DJ92_5336 PF01432 Peptidase family M3 DJ92_5336 PF08439 Oligopeptidase F DJ92_5338 PF03466 LysR substrate binding domain DJ92_5338 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_5339 PF00248 Aldo/keto reductase family DJ92_5341 PF04231 Endonuclease I DJ92_5342 PF00882 Zinc dependent phospholipase C DJ92_5344 PF02645 Uncharacterised protein, DegV family COG1307 DJ92_5348 PF07690 Major Facilitator Superfamily DJ92_535 PF00474 Sodium:solute symporter family DJ92_5350 PF04519 Polymer-forming cytoskeletal DJ92_5351 PF13171 Protein of unknown function (DUF4004) DJ92_5352 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_5352 PF12793 Sugar transport-related sRNA regulator N-term DJ92_5353 PF07690 Major Facilitator Superfamily DJ92_5356 PF04226 Transglycosylase associated protein DJ92_5359 PF00005 ABC transporter DJ92_5363 PF01209 ubiE/COQ5 methyltransferase family DJ92_5366 PF06130 Phosphate propanoyltransferase DJ92_5367 PF00155 Aminotransferase class I and II DJ92_5368 PF07977 FabA-like domain DJ92_5369 PF03630 Fumble DJ92_537 PF00171 Aldehyde dehydrogenase family DJ92_5371 PF13538 UvrD-like helicase C-terminal domain DJ92_5378 PF01385 Probable transposase DJ92_5378 PF12323 Helix-turn-helix domain DJ92_5378 PF07282 Putative transposase DNA-binding domain DJ92_5386 PF11799 impB/mucB/samB family C-terminal domain DJ92_5386 PF00817 impB/mucB/samB family DJ92_5386 PF11798 IMS family HHH motif DJ92_5389 PF13610 DDE domain DJ92_539 PF14151 YfhD-like protein DJ92_5392 PF01381 Helix-turn-helix DJ92_5394 PF02498 BRO family, N-terminal domain DJ92_5394 PF10548 P22AR C-terminal domain DJ92_5398 PF01695 IstB-like ATP binding protein DJ92_540 PF13249 Squalene-hopene cyclase N-terminal domain DJ92_540 PF13243 Squalene-hopene cyclase C-terminal domain DJ92_5404 PF10145 Phage-related minor tail protein DJ92_5404 PF01464 Transglycosylase SLT domain DJ92_5404 PF01551 Peptidase family M23 DJ92_5405 PF05105 Bacteriophage holin family DJ92_541 PF02681 Divergent PAP2 family DJ92_5412 PF13610 DDE domain DJ92_5415 PF01609 Transposase DDE domain DJ92_542 PF00892 EamA-like transporter family DJ92_5420 PF00589 Phage integrase family DJ92_5421 PF01810 LysE type translocator DJ92_5422 PF08892 YqcI/YcgG family DJ92_5424 PF13610 DDE domain DJ92_5427 PF01381 Helix-turn-helix DJ92_5427 PF00145 C-5 cytosine-specific DNA methylase DJ92_5429 PF02627 Carboxymuconolactone decarboxylase family DJ92_543 PF06961 Protein of unknown function (DUF1294) DJ92_5431 PF00440 Bacterial regulatory proteins, tetR family DJ92_5432 PF03176 MMPL family DJ92_5436 PF13610 DDE domain DJ92_5438 PF13276 HTH-like domain DJ92_5438 PF13333 Integrase core domain DJ92_5438 PF00665 Integrase core domain DJ92_5439 PF02796 Helix-turn-helix domain of resolvase DJ92_5439 PF00239 Resolvase, N terminal domain DJ92_544 PF13520 Amino acid permease DJ92_5442 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5442 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5447 PF07690 Major Facilitator Superfamily DJ92_5449 PF01609 Transposase DDE domain DJ92_545 PF05525 Branched-chain amino acid transport protein DJ92_5450 PF01609 Transposase DDE domain DJ92_5454 PF13333 Integrase core domain DJ92_5454 PF00665 Integrase core domain DJ92_5454 PF13276 HTH-like domain DJ92_5456 PF02559 CarD-like/TRCF domain DJ92_5459 PF10842 Protein of unknown function (DUF2642) DJ92_5461 PF01569 PAP2 superfamily DJ92_5463 PF01062 Bestrophin, RFP-TM, chloride channel DJ92_5465 PF13411 MerR HTH family regulatory protein DJ92_5465 PF06445 GyrI-like small molecule binding domain DJ92_5466 PF01609 Transposase DDE domain DJ92_5468 PF00144 Beta-lactamase DJ92_5469 PF00239 Resolvase, N terminal domain DJ92_5469 PF02796 Helix-turn-helix domain of resolvase DJ92_5472 PF01609 Transposase DDE domain DJ92_5476 PF00067 Cytochrome P450 DJ92_5479 PF00440 Bacterial regulatory proteins, tetR family DJ92_5480 PF00667 FAD binding domain DJ92_5480 PF00258 Flavodoxin DJ92_5480 PF00175 Oxidoreductase NAD-binding domain DJ92_5480 PF00067 Cytochrome P450 DJ92_5481 PF00440 Bacterial regulatory proteins, tetR family DJ92_5482 PF00171 Aldehyde dehydrogenase family DJ92_5484 PF13396 Phospholipase_D-nuclease N-terminal DJ92_5484 PF13091 PLD-like domain DJ92_5487 PF04892 VanZ like family DJ92_5490 PF13276 HTH-like domain DJ92_5490 PF00665 Integrase core domain DJ92_5490 PF13333 Integrase core domain DJ92_5494 PF01381 Helix-turn-helix DJ92_5501 PF17440 Thiol-activated cytolysin beta sandwich domain DJ92_5501 PF01289 Thiol-activated cytolysin DJ92_5503 PF16403 Domain of unknown function (DUF5011) DJ92_5504 PF00239 Resolvase, N terminal domain DJ92_5504 PF02796 Helix-turn-helix domain of resolvase DJ92_5509 PF00005 ABC transporter DJ92_5510 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DJ92_5510 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DJ92_5512 PF02660 Glycerol-3-phosphate acyltransferase DJ92_5513 PF07977 FabA-like domain DJ92_5514 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DJ92_5514 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DJ92_5515 PF01609 Transposase DDE domain DJ92_5516 PF16859 Tetracyclin repressor-like, C-terminal domain DJ92_5516 PF00440 Bacterial regulatory proteins, tetR family DJ92_5517 PF07690 Major Facilitator Superfamily DJ92_5518 PF01047 MarR family DJ92_5519 PF03466 LysR substrate binding domain DJ92_5519 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_552 PF08241 Methyltransferase domain DJ92_5520 PF01979 Amidohydrolase family DJ92_5523 PF00857 Isochorismatase family DJ92_5524 PF00561 alpha/beta hydrolase fold DJ92_5527 PF13610 DDE domain DJ92_553 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_5531 PF01609 Transposase DDE domain DJ92_5532 PF07537 CamS sex pheromone cAM373 precursor DJ92_554 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_5543 PF01569 PAP2 superfamily DJ92_5545 PF00005 ABC transporter DJ92_5547 PF13610 DDE domain DJ92_555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DJ92_5555 PF01270 Glycosyl hydrolases family 8 DJ92_5556 PF07690 Major Facilitator Superfamily DJ92_5559 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_5559 PF00107 Zinc-binding dehydrogenase DJ92_556 PF03816 Cell envelope-related transcriptional attenuator domain DJ92_5560 PF13610 DDE domain DJ92_5562 PF13610 DDE domain DJ92_5564 PF03315 Serine dehydratase beta chain DJ92_5564 PF01842 ACT domain DJ92_5566 PF00155 Aminotransferase class I and II DJ92_5569 PF08803 Putative mono-oxygenase ydhR DJ92_5570 PF00144 Beta-lactamase DJ92_5571 PF01609 Transposase DDE domain DJ92_5572 PF13610 DDE domain DJ92_5574 PF01235 Sodium:alanine symporter family DJ92_5575 PF04960 Glutaminase DJ92_5576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5577 PF00072 Response regulator receiver domain DJ92_5577 PF08664 YcbB domain DJ92_5578 PF13610 DDE domain DJ92_558 PF04542 Sigma-70 region 2 DJ92_558 PF08281 Sigma-70, region 4 DJ92_5581 PF00378 Enoyl-CoA hydratase/isomerase DJ92_5582 PF13610 DDE domain DJ92_5583 PF13610 DDE domain DJ92_5584 PF13333 Integrase core domain DJ92_5584 PF00665 Integrase core domain DJ92_5584 PF13276 HTH-like domain DJ92_5589 PF02796 Helix-turn-helix domain of resolvase DJ92_5589 PF00239 Resolvase, N terminal domain DJ92_5594 PF01609 Transposase DDE domain DJ92_5595 PF00589 Phage integrase family DJ92_5598 PF03413 Peptidase propeptide and YPEB domain DJ92_5598 PF01447 Thermolysin metallopeptidase, catalytic domain DJ92_5598 PF02868 Thermolysin metallopeptidase, alpha-helical domain DJ92_5598 PF07504 Fungalysin/Thermolysin Propeptide Motif DJ92_5599 PF01609 Transposase DDE domain DJ92_560 PF13732 Domain of unknown function (DUF4162) DJ92_560 PF00005 ABC transporter DJ92_5603 PF02796 Helix-turn-helix domain of resolvase DJ92_5603 PF00239 Resolvase, N terminal domain DJ92_5619 PF17209 Hfq protein DJ92_562 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DJ92_562 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DJ92_5621 PF02796 Helix-turn-helix domain of resolvase DJ92_5621 PF00239 Resolvase, N terminal domain DJ92_5629 PF03050 Transposase IS66 family DJ92_5629 PF13817 IS66 C-terminal element DJ92_5629 PF13005 zinc-finger binding domain of transposase IS66 DJ92_5629 PF13007 Transposase C of IS166 homeodomain DJ92_563 PF02600 Disulfide bond formation protein DsbB DJ92_564 PF00085 Thioredoxin DJ92_5642 PF01381 Helix-turn-helix DJ92_5651 PF07968 Leukocidin/Hemolysin toxin family DJ92_5654 PF17209 Hfq protein DJ92_5656 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_5656 PF18277 AbrB C-terminal domain DJ92_5658 PF00436 Single-strand binding protein family DJ92_5662 PF01131 DNA topoisomerase DJ92_5662 PF01396 Topoisomerase DNA binding C4 zinc finger DJ92_5662 PF01751 Toprim domain DJ92_5664 PF13342 C-terminal repeat of topoisomerase DJ92_5664 PF01751 Toprim domain DJ92_5664 PF01131 DNA topoisomerase DJ92_5668 PF18840 Large polyvalent protein associated domain 25 DJ92_567 PF00892 EamA-like transporter family DJ92_5675 PF00877 NlpC/P60 family DJ92_5676 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DJ92_5680 PF00152 tRNA synthetases class II (D, K and N) DJ92_5680 PF01336 OB-fold nucleic acid binding domain DJ92_5681 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_5681 PF02142 MGS-like domain DJ92_5681 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ92_5684 PF00545 ribonuclease DJ92_5685 PF01337 Barstar (barnase inhibitor) DJ92_5688 PF00005 ABC transporter DJ92_5689 PF00005 ABC transporter DJ92_5690 PF00005 ABC transporter DJ92_5698 PF00924 Mechanosensitive ion channel DJ92_57 PF13407 Periplasmic binding protein domain DJ92_570 PF00266 Aminotransferase class-V DJ92_5702 PF00005 ABC transporter DJ92_5703 PF00486 Transcriptional regulatory protein, C terminal DJ92_5703 PF00072 Response regulator receiver domain DJ92_5704 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_5704 PF00512 His Kinase A (phospho-acceptor) domain DJ92_5704 PF00672 HAMP domain DJ92_5705 PF13276 HTH-like domain DJ92_5705 PF13333 Integrase core domain DJ92_5705 PF00665 Integrase core domain DJ92_5708 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DJ92_571 PF00521 DNA gyrase/topoisomerase IV, subunit A DJ92_571 PF03989 DNA gyrase C-terminal domain, beta-propeller DJ92_5711 PF03965 Penicillinase repressor DJ92_5712 PF01609 Transposase DDE domain DJ92_5715 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ92_5716 PF00561 alpha/beta hydrolase fold DJ92_5717 PF13333 Integrase core domain DJ92_5717 PF00665 Integrase core domain DJ92_5717 PF13276 HTH-like domain DJ92_572 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_572 PF00986 DNA gyrase B subunit, carboxyl terminus DJ92_572 PF00204 DNA gyrase B DJ92_572 PF01751 Toprim domain DJ92_5721 PF04225 Opacity-associated protein A LysM-like domain DJ92_5721 PF01551 Peptidase family M23 DJ92_5722 PF01494 FAD binding domain DJ92_5723 PF01636 Phosphotransferase enzyme family DJ92_5725 PF01609 Transposase DDE domain DJ92_5728 PF13610 DDE domain DJ92_573 PF13380 CoA binding domain DJ92_5730 PF12146 Serine aminopeptidase, S33 DJ92_5730 PF13026 Protein of unknown function (DUF3887) DJ92_5731 PF01609 Transposase DDE domain DJ92_5732 PF01609 Transposase DDE domain DJ92_5739 PF10997 Alternate to MurJ DJ92_574 PF13180 PDZ domain DJ92_5743 PF01527 Transposase DJ92_5744 PF13276 HTH-like domain DJ92_5744 PF00665 Integrase core domain DJ92_5744 PF13333 Integrase core domain DJ92_5748 PF02517 CPBP intramembrane metalloprotease DJ92_5749 PF13610 DDE domain DJ92_575 PF00072 Response regulator receiver domain DJ92_575 PF00486 Transcriptional regulatory protein, C terminal DJ92_5757 PF00144 Beta-lactamase DJ92_5758 PF13610 DDE domain DJ92_5759 PF00107 Zinc-binding dehydrogenase DJ92_5759 PF08240 Alcohol dehydrogenase GroES-like domain DJ92_576 PF04055 Radical SAM superfamily DJ92_5761 PF11799 impB/mucB/samB family C-terminal domain DJ92_5761 PF00817 impB/mucB/samB family DJ92_5761 PF11798 IMS family HHH motif DJ92_577 PF13597 Anaerobic ribonucleoside-triphosphate reductase DJ92_577 PF03477 ATP cone domain DJ92_578 PF02660 Glycerol-3-phosphate acyltransferase DJ92_5783 PF13614 AAA domain DJ92_5789 PF12323 Helix-turn-helix domain DJ92_5789 PF01385 Probable transposase DJ92_5789 PF07282 Putative transposase DNA-binding domain DJ92_579 PF01521 Iron-sulphur cluster biosynthesis DJ92_5790 PF13411 MerR HTH family regulatory protein DJ92_5791 PF10026 Predicted Zn-dependent protease (DUF2268) DJ92_5792 PF01131 DNA topoisomerase DJ92_5792 PF01751 Toprim domain DJ92_5792 PF13342 C-terminal repeat of topoisomerase DJ92_5798 PF13649 Methyltransferase domain DJ92_58 PF02653 Branched-chain amino acid transport system / permease component DJ92_580 PF03061 Thioesterase superfamily DJ92_5805 PF02016 LD-carboxypeptidase N-terminal domain DJ92_5805 PF17676 LD-carboxypeptidase C-terminal domain DJ92_5807 PF00764 Arginosuccinate synthase DJ92_5808 PF13610 DDE domain DJ92_581 PF00704 Glycosyl hydrolases family 18 DJ92_581 PF01476 LysM domain DJ92_5811 PF18277 AbrB C-terminal domain DJ92_5811 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DJ92_5814 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DJ92_5814 PF05221 S-adenosyl-L-homocysteine hydrolase DJ92_5818 PF01209 ubiE/COQ5 methyltransferase family DJ92_5819 PF12802 MarR family DJ92_5820 PF01076 Plasmid recombination enzyme DJ92_5829 PF13152 Protein of unknown function (DUF3967) DJ92_5829 PF13411 MerR HTH family regulatory protein DJ92_583 PF08177 Small acid-soluble spore protein N family DJ92_5830 PF01381 Helix-turn-helix DJ92_5832 PF01076 Plasmid recombination enzyme DJ92_5838 PF12802 MarR family DJ92_5840 PF01076 Plasmid recombination enzyme DJ92_585 PF14579 Helix-hairpin-helix motif DJ92_585 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ92_585 PF11490 DNA polymerase III polC-type N-terminus II DJ92_585 PF00929 Exonuclease DJ92_585 PF02811 PHP domain DJ92_585 PF01336 OB-fold nucleic acid binding domain DJ92_585 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ92_586 PF00578 AhpC/TSA family DJ92_589 PF00330 Aconitase family (aconitate hydratase) DJ92_589 PF00694 Aconitase C-terminal domain DJ92_59 PF02653 Branched-chain amino acid transport system / permease component DJ92_591 PF01522 Polysaccharide deacetylase DJ92_593 PF08179 Small acid-soluble spore protein P family DJ92_596 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_596 PF01411 tRNA synthetases class II (A) DJ92_596 PF02272 DHHA1 domain DJ92_599 PF13193 AMP-binding enzyme C-terminal domain DJ92_599 PF00501 AMP-binding enzyme DJ92_60 PF00005 ABC transporter DJ92_603 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_605 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DJ92_605 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DJ92_607 PF13188 PAS domain DJ92_607 PF13426 PAS domain DJ92_607 PF00989 PAS fold DJ92_607 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_607 PF00512 His Kinase A (phospho-acceptor) domain DJ92_608 PF01645 Conserved region in glutamate synthase DJ92_609 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DJ92_61 PF04198 Putative sugar-binding domain DJ92_61 PF00325 Bacterial regulatory proteins, crp family DJ92_610 PF02559 CarD-like/TRCF domain DJ92_611 PF00491 Arginase family DJ92_612 PF01979 Amidohydrolase family DJ92_613 PF01175 Urocanase Rossmann-like domain DJ92_613 PF17392 Urocanase C-terminal domain DJ92_613 PF17391 Urocanase N-terminal domain DJ92_615 PF09021 HutP DJ92_62 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DJ92_62 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DJ92_621 PF11084 Protein of unknown function (DUF2621) DJ92_622 PF07301 Protein of unknown function (DUF1453) DJ92_623 PF02683 Cytochrome C biogenesis protein transmembrane region DJ92_627 PF00005 ABC transporter DJ92_630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DJ92_630 PF03466 LysR substrate binding domain DJ92_631 PF03788 LrgA family DJ92_632 PF04172 LrgB-like family DJ92_633 PF01546 Peptidase family M20/M25/M40 DJ92_634 PF01614 Bacterial transcriptional regulator DJ92_634 PF09339 IclR helix-turn-helix domain DJ92_637 PF09997 Predicted membrane protein (DUF2238) DJ92_638 PF01925 Sulfite exporter TauE/SafE DJ92_64 PF01791 DeoC/LacD family aldolase DJ92_643 PF00664 ABC transporter transmembrane region DJ92_643 PF00005 ABC transporter DJ92_644 PF00005 ABC transporter DJ92_644 PF00664 ABC transporter transmembrane region DJ92_645 PF03672 Uncharacterised protein family (UPF0154) DJ92_646 PF10747 Sporulation inhibitor of replication protein SirA DJ92_647 PF02780 Transketolase, C-terminal domain DJ92_647 PF02779 Transketolase, pyrimidine binding domain DJ92_647 PF00456 Transketolase, thiamine diphosphate binding domain DJ92_65 PF05223 NTF2-like N-terminal transpeptidase domain DJ92_65 PF03717 Penicillin-binding Protein dimerisation domain DJ92_65 PF00905 Penicillin binding protein transpeptidase domain DJ92_650 PF00149 Calcineurin-like phosphoesterase DJ92_650 PF02872 5'-nucleotidase, C-terminal domain DJ92_651 PF05979 Bacterial protein of unknown function (DUF896) DJ92_652 PF00239 Resolvase, N terminal domain DJ92_653 PF01726 LexA DNA binding domain DJ92_653 PF00717 Peptidase S24-like DJ92_656 PF03551 Transcriptional regulator PadR-like family DJ92_657 PF02887 Pyruvate kinase, alpha/beta domain DJ92_657 PF00224 Pyruvate kinase, barrel domain DJ92_657 PF00391 PEP-utilising enzyme, mobile domain DJ92_660 PF08141 Small acid-soluble spore protein H family DJ92_661 PF07726 ATPase family associated with various cellular activities (AAA) DJ92_661 PF17863 AAA lid domain DJ92_662 PF01882 Protein of unknown function DUF58 DJ92_663 PF11992 Domain of unknown function (DUF3488) DJ92_663 PF01841 Transglutaminase-like superfamily DJ92_663 PF13559 Domain of unknown function (DUF4129) DJ92_669 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_67 PF00753 Metallo-beta-lactamase superfamily DJ92_672 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_679 PF01510 N-acetylmuramoyl-L-alanine amidase DJ92_68 PF03717 Penicillin-binding Protein dimerisation domain DJ92_68 PF00905 Penicillin binding protein transpeptidase domain DJ92_680 PF03951 Glutamine synthetase, beta-Grasp domain DJ92_680 PF00120 Glutamine synthetase, catalytic domain DJ92_681 PF13411 MerR HTH family regulatory protein DJ92_682 PF06838 Methionine gamma-lyase DJ92_683 PF16360 GTP-binding GTPase Middle Region DJ92_683 PF13167 GTP-binding GTPase N-terminal DJ92_683 PF01926 50S ribosome-binding GTPase DJ92_684 PF03458 UPF0126 domain DJ92_687 PF17866 AAA lid domain DJ92_687 PF00004 ATPase family associated with various cellular activities (AAA) DJ92_690 PF17209 Hfq protein DJ92_693 PF06725 3D domain DJ92_693 PF01476 LysM domain DJ92_694 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DJ92_694 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DJ92_695 PF00294 pfkB family carbohydrate kinase DJ92_696 PF00455 DeoR C terminal sensor domain DJ92_696 PF08220 DeoR-like helix-turn-helix domain DJ92_697 PF00465 Iron-containing alcohol dehydrogenase DJ92_698 PF04238 Protein of unknown function (DUF420) DJ92_7 PF01594 AI-2E family transporter DJ92_70 PF04542 Sigma-70 region 2 DJ92_70 PF08281 Sigma-70, region 4 DJ92_703 PF01226 Formate/nitrite transporter DJ92_704 PF00216 Bacterial DNA-binding protein DJ92_706 PF02583 Metal-sensitive transcriptional repressor DJ92_707 PF00756 Putative esterase DJ92_708 PF00005 ABC transporter DJ92_709 PF01032 FecCD transport family DJ92_71 PF03992 Antibiotic biosynthesis monooxygenase DJ92_710 PF01032 FecCD transport family DJ92_711 PF01497 Periplasmic binding protein DJ92_712 PF03372 Endonuclease/Exonuclease/phosphatase family DJ92_713 PF12833 Helix-turn-helix domain DJ92_713 PF02805 Metal binding domain of Ada DJ92_714 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DJ92_714 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DJ92_715 PF00730 HhH-GPD superfamily base excision DNA repair protein DJ92_715 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DJ92_716 PF07687 Peptidase dimerisation domain DJ92_716 PF01546 Peptidase family M20/M25/M40 DJ92_718 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DJ92_72 PF07690 Major Facilitator Superfamily DJ92_72 PF00083 Sugar (and other) transporter DJ92_723 PF10787 Uncharacterised protein from bacillus cereus group DJ92_724 PF00155 Aminotransferase class I and II DJ92_724 PF00392 Bacterial regulatory proteins, gntR family DJ92_726 PF00324 Amino acid permease DJ92_727 PF04151 Bacterial pre-peptidase C-terminal domain DJ92_727 PF08453 Peptidase family M9 N-terminal DJ92_727 PF01752 Collagenase DJ92_727 PF18496 Collagenase G catalytic helper subdomain DJ92_728 PF00512 His Kinase A (phospho-acceptor) domain DJ92_728 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_728 PF00672 HAMP domain DJ92_729 PF02687 FtsX-like permease family DJ92_730 PF00005 ABC transporter DJ92_733 PF07301 Protein of unknown function (DUF1453) DJ92_734 PF02525 Flavodoxin-like fold DJ92_736 PF04294 VanW like protein DJ92_739 PF00440 Bacterial regulatory proteins, tetR family DJ92_739 PF08359 YsiA-like protein, C-terminal region DJ92_742 PF00005 ABC transporter DJ92_743 PF00512 His Kinase A (phospho-acceptor) domain DJ92_743 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_744 PF00486 Transcriptional regulatory protein, C terminal DJ92_744 PF00072 Response regulator receiver domain DJ92_747 PF00005 ABC transporter DJ92_749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DJ92_749 PF00512 His Kinase A (phospho-acceptor) domain DJ92_750 PF00072 Response regulator receiver domain DJ92_750 PF00486 Transcriptional regulatory protein, C terminal DJ92_756 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ92_757 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DJ92_76 PF13302 Acetyltransferase (GNAT) domain DJ92_760 PF13610 DDE domain DJ92_764 PF13288 DXP reductoisomerase C-terminal domain DJ92_764 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ92_764 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ92_766 PF13610 DDE domain DJ92_767 PF02872 5'-nucleotidase, C-terminal domain DJ92_767 PF00149 Calcineurin-like phosphoesterase DJ92_77 PF12681 Glyoxalase-like domain DJ92_770 PF01227 GTP cyclohydrolase I DJ92_771 PF04055 Radical SAM superfamily DJ92_772 PF01242 6-pyruvoyl tetrahydropterin synthase DJ92_773 PF06508 Queuosine biosynthesis protein QueC DJ92_776 PF00005 ABC transporter DJ92_778 PF13649 Methyltransferase domain DJ92_781 PF16861 Carbamoyltransferase C-terminus DJ92_781 PF02543 Carbamoyltransferase N-terminus DJ92_785 PF00144 Beta-lactamase DJ92_791 PF03313 Serine dehydratase alpha chain DJ92_802 PF00392 Bacterial regulatory proteins, gntR family DJ92_802 PF00155 Aminotransferase class I and II DJ92_803 PF00892 EamA-like transporter family DJ92_804 PF01609 Transposase DDE domain DJ92_806 PF13610 DDE domain DJ92_810 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DJ92_810 PF00391 PEP-utilising enzyme, mobile domain DJ92_811 PF01119 DNA mismatch repair protein, C-terminal domain DJ92_811 PF08676 MutL C terminal dimerisation domain DJ92_812 PF05190 MutS family domain IV DJ92_812 PF01624 MutS domain I DJ92_812 PF00488 MutS domain V DJ92_812 PF05188 MutS domain II DJ92_812 PF05192 MutS domain III DJ92_813 PF10628 Outer spore coat protein E (CotE) DJ92_814 PF06133 Control of competence regulator ComK, YlbF/YmcA DJ92_815 PF00919 Uncharacterized protein family UPF0004 DJ92_815 PF04055 Radical SAM superfamily DJ92_815 PF01938 TRAM domain DJ92_816 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DJ92_817 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DJ92_817 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DJ92_817 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DJ92_818 PF01244 Membrane dipeptidase (Peptidase family M19) DJ92_819 PF04232 Stage V sporulation protein S (SpoVS) DJ92_820 PF13277 YmdB-like protein DJ92_822 PF00154 recA bacterial DNA recombination protein DJ92_823 PF00994 Probable molybdopterin binding domain DJ92_823 PF02464 Competence-damaged protein DJ92_823 PF18146 Damage-inducible protein CinA KH domain DJ92_824 PF01066 CDP-alcohol phosphatidyltransferase DJ92_825 PF13464 Domain of unknown function (DUF4115) DJ92_826 PF11868 Protein of unknown function (DUF3388) DJ92_827 PF11588 Protein of unknown function (DUF3243) DJ92_829 PF00675 Insulinase (Peptidase family M16) DJ92_829 PF05193 Peptidase M16 inactive domain DJ92_830 PF05193 Peptidase M16 inactive domain DJ92_835 PF00392 Bacterial regulatory proteins, gntR family DJ92_835 PF07702 UTRA domain DJ92_836 PF09397 Ftsk gamma domain DJ92_836 PF01580 FtsK/SpoIIIE family DJ92_836 PF17854 FtsK alpha domain DJ92_837 PF14035 YlzJ-like protein DJ92_838 PF00574 Clp protease DJ92_839 PF17770 Ribonuclease J C-terminal domain DJ92_839 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DJ92_839 PF00753 Metallo-beta-lactamase superfamily DJ92_84 PF17863 AAA lid domain DJ92_84 PF07726 ATPase family associated with various cellular activities (AAA) DJ92_840 PF00701 Dihydrodipicolinate synthetase family DJ92_841 PF00696 Amino acid kinase family DJ92_841 PF13840 ACT domain DJ92_842 PF02774 Semialdehyde dehydrogenase, dimerisation domain DJ92_842 PF01118 Semialdehyde dehydrogenase, NAD binding domain DJ92_843 PF02441 Flavoprotein DJ92_845 PF14436 Bacterial EndoU nuclease DJ92_845 PF04740 LXG domain of WXG superfamily DJ92_848 PF18801 response regulator aspartate phosphatase H, N terminal DJ92_849 PF13457 GW (Gly-Tryp) dipeptide domain DJ92_849 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DJ92_860 PF03354 Phage Terminase DJ92_861 PF10668 Phage terminase small subunit DJ92_866 PF11553 Protein of unknown function (DUF3231) DJ92_868 PF00589 Phage integrase family DJ92_876 PF00772 DnaB-like helicase N terminal domain DJ92_876 PF03796 DnaB-like helicase C terminal domain DJ92_88 PF00881 Nitroreductase family DJ92_883 PF01381 Helix-turn-helix DJ92_888 PF02441 Flavoprotein DJ92_889 PF16924 Dipicolinate synthase subunit A N-terminal domain DJ92_889 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DJ92_89 PF01047 MarR family DJ92_890 PF05239 PRC-barrel domain DJ92_891 PF00675 Insulinase (Peptidase family M16) DJ92_891 PF05193 Peptidase M16 inactive domain DJ92_892 PF01522 Polysaccharide deacetylase DJ92_893 PF00575 S1 RNA binding domain DJ92_893 PF01138 3' exoribonuclease family, domain 1 DJ92_893 PF00013 KH domain DJ92_893 PF03725 3' exoribonuclease family, domain 2 DJ92_893 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DJ92_894 PF00312 Ribosomal protein S15 DJ92_895 PF01687 Riboflavin kinase DJ92_895 PF06574 FAD synthetase DJ92_896 PF16198 tRNA pseudouridylate synthase B C-terminal domain DJ92_896 PF01509 TruB family pseudouridylate synthase (N terminal domain) DJ92_897 PF02033 Ribosome-binding factor A DJ92_898 PF04456 Protein of unknown function (DUF503) DJ92_899 PF00009 Elongation factor Tu GTP binding domain DJ92_899 PF11987 Translation-initiation factor 2 DJ92_899 PF04760 Translation initiation factor IF-2, N-terminal region DJ92_90 PF14492 Elongation Factor G, domain II DJ92_90 PF00009 Elongation factor Tu GTP binding domain DJ92_90 PF03764 Elongation factor G, domain IV DJ92_90 PF00679 Elongation factor G C-terminus DJ92_900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DJ92_901 PF04296 Protein of unknown function (DUF448) DJ92_902 PF13184 NusA-like KH domain DJ92_902 PF08529 NusA N-terminal domain DJ92_902 PF00575 S1 RNA binding domain DJ92_903 PF17384 RimP C-terminal SH3 domain DJ92_903 PF02576 RimP N-terminal domain DJ92_905 PF14579 Helix-hairpin-helix motif DJ92_905 PF02811 PHP domain DJ92_905 PF14480 DNA polymerase III polC-type N-terminus I DJ92_905 PF11490 DNA polymerase III polC-type N-terminus II DJ92_905 PF00929 Exonuclease DJ92_905 PF07733 Bacterial DNA polymerase III alpha NTPase domain DJ92_905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DJ92_906 PF04073 Aminoacyl-tRNA editing domain DJ92_906 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DJ92_906 PF03129 Anticodon binding domain DJ92_907 PF13180 PDZ domain DJ92_907 PF02163 Peptidase family M50 DJ92_908 PF13288 DXP reductoisomerase C-terminal domain DJ92_908 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DJ92_908 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DJ92_910 PF01255 Putative undecaprenyl diphosphate synthase DJ92_912 PF00696 Amino acid kinase family DJ92_914 PF00318 Ribosomal protein S2 DJ92_915 PF06018 CodY GAF-like domain DJ92_915 PF08222 CodY helix-turn-helix domain DJ92_916 PF07724 AAA domain (Cdc48 subfamily) DJ92_916 PF10431 C-terminal, D2-small domain, of ClpB protein DJ92_917 PF00227 Proteasome subunit DJ92_918 PF02899 Phage integrase, N-terminal SAM-like domain DJ92_918 PF00589 Phage integrase family DJ92_92 PF13170 Protein of unknown function (DUF4003) DJ92_920 PF01131 DNA topoisomerase DJ92_920 PF01751 Toprim domain DJ92_920 PF01396 Topoisomerase DNA binding C4 zinc finger DJ92_921 PF02481 DNA recombination-mediator protein A DJ92_922 PF02629 CoA binding domain DJ92_922 PF00549 CoA-ligase DJ92_923 PF00549 CoA-ligase DJ92_923 PF08442 ATP-grasp domain DJ92_924 PF01351 Ribonuclease HII DJ92_925 PF01926 50S ribosome-binding GTPase DJ92_926 PF10502 Signal peptidase, peptidase S26 DJ92_927 PF01245 Ribosomal protein L19 DJ92_93 PF00293 NUDIX domain DJ92_931 PF00886 Ribosomal protein S16 DJ92_932 PF02978 Signal peptide binding domain DJ92_932 PF02881 SRP54-type protein, helical bundle domain DJ92_932 PF00448 SRP54-type protein, GTPase domain DJ92_933 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DJ92_934 PF00448 SRP54-type protein, GTPase domain DJ92_934 PF02881 SRP54-type protein, helical bundle domain DJ92_935 PF06470 SMC proteins Flexible Hinge Domain DJ92_935 PF02463 RecF/RecN/SMC N terminal domain DJ92_936 PF00035 Double-stranded RNA binding motif DJ92_936 PF14622 Ribonuclease-III-like DJ92_937 PF00550 Phosphopantetheine attachment site DJ92_939 PF00698 Acyl transferase domain DJ92_94 PF00144 Beta-lactamase DJ92_940 PF02504 Fatty acid synthesis protein DJ92_941 PF03061 Thioesterase superfamily DJ92_942 PF00271 Helicase conserved C-terminal domain DJ92_942 PF00270 DEAD/DEAH box helicase DJ92_942 PF17191 RecG wedge domain DJ92_943 PF02734 DAK2 domain DJ92_943 PF13684 Dihydroxyacetone kinase family DJ92_944 PF03780 Asp23 family, cell envelope-related function DJ92_945 PF00830 Ribosomal L28 family DJ92_946 PF04263 Thiamin pyrophosphokinase, catalytic domain DJ92_946 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ92_947 PF00834 Ribulose-phosphate 3 epimerase family DJ92_948 PF03193 RsgA GTPase DJ92_948 PF16745 RsgA N-terminal domain DJ92_949 PF03793 PASTA domain DJ92_949 PF00069 Protein kinase domain DJ92_952 PF01029 NusB family DJ92_952 PF01189 16S rRNA methyltransferase RsmB/F DJ92_953 PF02911 Formyl transferase, C-terminal domain DJ92_953 PF00551 Formyl transferase DJ92_954 PF01327 Polypeptide deformylase DJ92_955 PF18074 Primosomal protein N C-terminal domain DJ92_955 PF17764 3′ DNA-binding domain (3′BD) DJ92_955 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DJ92_955 PF04851 Type III restriction enzyme, res subunit DJ92_955 PF00271 Helicase conserved C-terminal domain DJ92_956 PF04127 DNA / pantothenate metabolism flavoprotein DJ92_956 PF02441 Flavoprotein DJ92_957 PF01192 RNA polymerase Rpb6 DJ92_958 PF00625 Guanylate kinase DJ92_959 PF04025 Domain of unknown function (DUF370) DJ92_960 PF08340 Domain of unknown function (DUF1732) DJ92_960 PF03755 YicC-like family, N-terminal region DJ92_961 PF00690 Cation transporter/ATPase, N-terminus DJ92_961 PF00689 Cation transporting ATPase, C-terminus DJ92_963 PF00557 Metallopeptidase family M24 DJ92_963 PF01321 Creatinase/Prolidase N-terminal domain DJ92_968 PF00682 HMGL-like DJ92_969 PF00561 alpha/beta hydrolase fold DJ92_970 PF04284 Protein of unknown function (DUF441) DJ92_971 PF00899 ThiF family DJ92_971 PF00581 Rhodanese-like domain DJ92_972 PF00899 ThiF family DJ92_973 PF00156 Phosphoribosyl transferase domain DJ92_974 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ92_975 PF01180 Dihydroorotate dehydrogenase DJ92_976 PF00970 Oxidoreductase FAD-binding domain DJ92_976 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DJ92_977 PF02142 MGS-like domain DJ92_977 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ92_977 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DJ92_978 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DJ92_978 PF00117 Glutamine amidotransferase class-I DJ92_979 PF01979 Amidohydrolase family DJ92_981 PF00860 Permease family DJ92_982 PF00156 Phosphoribosyl transferase domain DJ92_983 PF01479 S4 domain DJ92_983 PF00849 RNA pseudouridylate synthase DJ92_984 PF01252 Signal peptidase (SPase) II DJ92_986 PF08264 Anticodon-binding domain of tRNA DJ92_986 PF00133 tRNA synthetases class I (I, L, M and V) DJ92_986 PF06827 Zinc finger found in FPG and IleRS DJ92_987 PF05103 DivIVA protein DJ92_988 PF17774 Putative RNA-binding domain in YlmH DJ92_988 PF01479 S4 domain DJ92_989 PF02325 YGGT family DJ92_99 PF00583 Acetyltransferase (GNAT) family DJ92_990 PF04472 Cell division protein SepF DJ92_991 PF01168 Alanine racemase, N-terminal domain DJ92_993 PF05239 PRC-barrel domain DJ92_994 PF04545 Sigma-70, region 4 DJ92_994 PF04542 Sigma-70 region 2 DJ92_994 PF04539 Sigma-70 region 3 DJ92_995 PF04542 Sigma-70 region 2 DJ92_995 PF04545 Sigma-70, region 4 DJ92_996 PF03419 Sporulation factor SpoIIGA DJ92_997 PF12327 FtsZ family, C-terminal domain DJ92_997 PF00091 Tubulin/FtsZ family, GTPase domain DJ92_998 PF02491 SHS2 domain inserted in FTSA DJ92_999 PF08478 POTRA domain, FtsQ-type DJ92_999 PF03799 Cell division protein FtsQ