DJ92_1 SM00382 ATPases associated with a variety of cellular activities DJ92_1006 SM00740 DJ92_1006 DJ92_1007 SM00740 DJ92_1007 DJ92_1013 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains DJ92_1017 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_1027 SM00855 Phosphoglycerate mutase family DJ92_1039 SM00878 Biotin carboxylase C-terminal domain DJ92_104 SM00530 Helix-turn-helix XRE-family like proteins DJ92_1043 SM00670 Large family of predicted nucleotide-binding domains DJ92_1048 SM00838 Elongation factor G C-terminus DJ92_1066 SM00861 Transketolase, pyrimidine binding domain DJ92_1071 SM00849 Metallo-beta-lactamase superfamily DJ92_1086 SM00052 Putative diguanylate phosphodiesterase DJ92_11 SM00028 Tetratricopeptide repeats DJ92_1103 SM00387 Histidine kinase-like ATPases DJ92_1103 SM00388 His Kinase A (phosphoacceptor) domain DJ92_1107 SM00642 Alpha-amylase domain DJ92_1108 SM00642 Alpha-amylase domain DJ92_1109 SM00382 ATPases associated with a variety of cellular activities DJ92_111 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_1118 SM00382 ATPases associated with a variety of cellular activities DJ92_1133 SM01007 Class II Aldolase and Adducin N-terminal domain DJ92_1139 SM00267 diguanylate cyclase DJ92_1146 SM01061 CAT RNA binding domain DJ92_1148 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_1148 SM00866 DJ92_1148 DJ92_1168 SM00387 Histidine kinase-like ATPases DJ92_1170 SM00936 Penicillin-binding protein 5, C-terminal domain DJ92_1171 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_1172 SM00382 ATPases associated with a variety of cellular activities DJ92_1176 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_1180 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DJ92_1201 SM00354 helix_turn _helix lactose operon repressor DJ92_1205 SM00704 CDGSH-type zinc finger. Function unknown. DJ92_1214 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_1214 SM00876 Biotin and Thiamin Synthesis associated domain DJ92_1224 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_1231 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ92_1234 SM00849 Metallo-beta-lactamase superfamily DJ92_1239 SM00849 Metallo-beta-lactamase superfamily DJ92_1251 SM00382 ATPases associated with a variety of cellular activities DJ92_1253 SM00062 Bacterial periplasmic substrate-binding proteins DJ92_1253 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ92_1260 SM00861 Transketolase, pyrimidine binding domain DJ92_1264 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_1266 SM00091 PAS domain DJ92_1266 SM00382 ATPases associated with a variety of cellular activities DJ92_1270 SM00028 Tetratricopeptide repeats DJ92_1273 SM00448 cheY-homologous receiver domain DJ92_1274 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_1277 SM00363 S4 RNA-binding domain DJ92_1278 SM00861 Transketolase, pyrimidine binding domain DJ92_1285 SM00878 Biotin carboxylase C-terminal domain DJ92_1296 SM00382 ATPases associated with a variety of cellular activities DJ92_1300 SM00841 Elongation factor P, C-terminal DJ92_1300 SM01185 DJ92_1300 DJ92_1307 SM00529 Helix-turn-helix diphteria tox regulatory element DJ92_1314 SM00450 Rhodanese Homology Domain DJ92_1316 SM00354 helix_turn _helix lactose operon repressor DJ92_1323 SM00382 ATPases associated with a variety of cellular activities DJ92_1324 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_1330 SM00487 DEAD-like helicases superfamily DJ92_1330 SM00490 helicase superfamily c-terminal domain DJ92_1344 SM00382 ATPases associated with a variety of cellular activities DJ92_1349 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_1354 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_1358 SM01018 B12 binding domain DJ92_1363 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_1365 SM00849 Metallo-beta-lactamase superfamily DJ92_1373 SM00382 ATPases associated with a variety of cellular activities DJ92_1386 SM00382 ATPases associated with a variety of cellular activities DJ92_1389 SM00518 AP endonuclease family 2 DJ92_139 SM00797 Allophanate hydrolase subunit 2 DJ92_1390 SM00487 DEAD-like helicases superfamily DJ92_1390 SM00490 helicase superfamily c-terminal domain DJ92_1397 SM00400 zinc finger DJ92_1397 SM00493 DJ92_1397 DJ92_1397 SM00766 DNA primase DnaG DnaB-binding DJ92_140 SM00796 Allophanate hydrolase subunit 1 DJ92_1401 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_1408 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_141 SM00346 helix_turn_helix isocitrate lyase regulation DJ92_1414 SM01133 DJ92_1414 DJ92_1415 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_1418 SM00271 DnaJ molecular chaperone homology domain DJ92_1422 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_1424 SM00838 Elongation factor G C-terminus DJ92_1430 SM00849 Metallo-beta-lactamase superfamily DJ92_1432 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ92_1436 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_1438 SM01103 DJ92_1438 DJ92_144 SM00287 Bacterial SH3 domain homologues DJ92_1445 SM00954 Region found in RelA / SpoT proteins DJ92_1447 SM00098 Alkaline phosphatase homologues DJ92_1452 SM00855 Phosphoglycerate mutase family DJ92_1459 SM00530 Helix-turn-helix XRE-family like proteins DJ92_1463 SM00354 helix_turn _helix lactose operon repressor DJ92_147 SM00382 ATPases associated with a variety of cellular activities DJ92_1485 SM00732 Likely ribonuclease with RNase H fold. DJ92_1487 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_1493 SM00028 Tetratricopeptide repeats DJ92_1497 SM00382 ATPases associated with a variety of cellular activities DJ92_1506 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_1506 SM00954 Region found in RelA / SpoT proteins DJ92_1515 SM01323 DJ92_1515 DJ92_1519 SM00382 ATPases associated with a variety of cellular activities DJ92_1520 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ92_1525 SM00257 Lysin motif DJ92_1535 SM00382 ATPases associated with a variety of cellular activities DJ92_1536 SM00387 Histidine kinase-like ATPases DJ92_1537 SM00448 cheY-homologous receiver domain DJ92_1537 SM00862 Transcriptional regulatory protein, C terminal DJ92_1539 SM01317 DJ92_1539 DJ92_1557 SM00257 Lysin motif DJ92_1559 SM01004 Delta-aminolevulinic acid dehydratase DJ92_1564 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_1567 SM00382 ATPases associated with a variety of cellular activities DJ92_1567 SM00464 Found in ATP-dependent protease La (LON) DJ92_1568 SM00382 ATPases associated with a variety of cellular activities DJ92_1569 SM00382 ATPases associated with a variety of cellular activities DJ92_1569 SM00994 ClpX C4-type zinc finger DJ92_1569 SM01086 C-terminal, D2-small domain, of ClpB protein DJ92_1580 SM00909 Sporulation and spore germination DJ92_1582 SM00421 helix_turn_helix, Lux Regulon DJ92_1586 SM01038 Beta galactosidase small chain DJ92_1590 SM00342 helix_turn_helix, arabinose operon control protein DJ92_1590 SM00448 cheY-homologous receiver domain DJ92_1591 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_1592 SM00530 Helix-turn-helix XRE-family like proteins DJ92_1597 SM00382 ATPases associated with a variety of cellular activities DJ92_1605 SM00465 GIY-YIG type nucleases (URI domain) DJ92_1615 SM00893 Electron transfer flavoprotein domain DJ92_1616 SM00893 Electron transfer flavoprotein domain DJ92_1627 SM00382 ATPases associated with a variety of cellular activities DJ92_1628 SM00387 Histidine kinase-like ATPases DJ92_1628 SM00388 His Kinase A (phosphoacceptor) domain DJ92_1629 SM00448 cheY-homologous receiver domain DJ92_1629 SM00862 Transcriptional regulatory protein, C terminal DJ92_163 SM00382 ATPases associated with a variety of cellular activities DJ92_1632 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ92_1633 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DJ92_1635 SM00363 S4 RNA-binding domain DJ92_1636 SM00463 Small MutS-related domain DJ92_1636 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ92_1636 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ92_1637 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ92_1637 SM00481 DNA polymerase alpha chain like domain DJ92_1637 SM00483 DNA polymerase X family DJ92_1645 SM00873 B3/4 domain DJ92_1645 SM00874 tRNA synthetase B5 domain DJ92_1645 SM00896 Ferredoxin-fold anticodon binding domain DJ92_1647 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ92_165 SM00421 helix_turn_helix, Lux Regulon DJ92_1658 SM00829 Enoylreductase DJ92_1662 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_1668 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ92_1671 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain DJ92_1671 SM01232 DJ92_1671 DJ92_1672 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ92_1672 SM00474 3'-5' exonuclease DJ92_1672 SM00475 5'-3' exonuclease DJ92_1672 SM00482 DNA polymerase A domain DJ92_1673 SM00091 PAS domain DJ92_1673 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_1673 SM00387 Histidine kinase-like ATPases DJ92_1673 SM00388 His Kinase A (phosphoacceptor) domain DJ92_1674 SM00448 cheY-homologous receiver domain DJ92_1674 SM00862 Transcriptional regulatory protein, C terminal DJ92_1679 SM01329 DJ92_1679 DJ92_168 SM00382 ATPases associated with a variety of cellular activities DJ92_1688 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_1689 SM00919 Malic enzyme, NAD binding domain DJ92_1689 SM01274 DJ92_1689 DJ92_1690 SM00481 DNA polymerase alpha chain like domain DJ92_1696 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_1698 SM00849 Metallo-beta-lactamase superfamily DJ92_17 SM00855 Phosphoglycerate mutase family DJ92_1710 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ92_1710 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ92_172 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_172 SM00387 Histidine kinase-like ATPases DJ92_172 SM00388 His Kinase A (phosphoacceptor) domain DJ92_173 SM00448 cheY-homologous receiver domain DJ92_173 SM00862 Transcriptional regulatory protein, C terminal DJ92_1740 SM00981 DJ92_1740 DJ92_1748 SM00363 S4 RNA-binding domain DJ92_1748 SM01390 DJ92_1748 DJ92_1750 SM00363 S4 RNA-binding domain DJ92_1756 SM01266 DJ92_1756 DJ92_1759 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_1765 SM00354 helix_turn _helix lactose operon repressor DJ92_1766 SM00830 Chorismate mutase type II DJ92_1777 SM00843 DJ92_1777 DJ92_1778 SM00646 DJ92_1778 DJ92_1791 SM00849 Metallo-beta-lactamase superfamily DJ92_1795 SM00642 Alpha-amylase domain DJ92_1798 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ92_1799 SM00363 S4 RNA-binding domain DJ92_180 SM00382 ATPases associated with a variety of cellular activities DJ92_1803 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_1808 SM01058 CarD-like/TRCF domain DJ92_1813 SM00852 Probable molybdopterin binding domain DJ92_1816 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_1819 SM00100 Cyclic nucleotide-monophosphate binding domain DJ92_1819 SM00419 helix_turn_helix, cAMP Regulatory protein DJ92_1820 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ92_1827 SM00450 Rhodanese Homology Domain DJ92_1840 SM00382 ATPases associated with a variety of cellular activities DJ92_1844 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_1853 SM00014 Acid phosphatase homologues DJ92_1856 SM00852 Probable molybdopterin binding domain DJ92_1869 SM00387 Histidine kinase-like ATPases DJ92_1870 SM00387 Histidine kinase-like ATPases DJ92_1870 SM00388 His Kinase A (phosphoacceptor) domain DJ92_1876 SM00382 ATPases associated with a variety of cellular activities DJ92_1880 SM00646 DJ92_1880 DJ92_1888 SM00354 helix_turn _helix lactose operon repressor DJ92_1893 SM00947 Carbonic anhydrase DJ92_1894 SM01234 DJ92_1894 DJ92_1907 SM00899 DJ92_1907 DJ92_1909 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_1909 SM00387 Histidine kinase-like ATPases DJ92_1909 SM00388 His Kinase A (phosphoacceptor) domain DJ92_1910 SM00448 cheY-homologous receiver domain DJ92_1910 SM00862 Transcriptional regulatory protein, C terminal DJ92_1923 SM00382 ATPases associated with a variety of cellular activities DJ92_1924 SM00342 helix_turn_helix, arabinose operon control protein DJ92_1924 SM00871 Bacterial transcription activator, effector binding domain DJ92_1926 SM00382 ATPases associated with a variety of cellular activities DJ92_1928 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_1929 SM00448 cheY-homologous receiver domain DJ92_1929 SM00862 Transcriptional regulatory protein, C terminal DJ92_1930 SM00387 Histidine kinase-like ATPases DJ92_1932 SM00382 ATPases associated with a variety of cellular activities DJ92_1936 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ92_1944 SM00357 Cold shock protein domain DJ92_1946 SM00422 helix_turn_helix, mercury resistance DJ92_1953 SM00642 Alpha-amylase domain DJ92_1988 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_1990 SM00344 helix_turn_helix ASNC type DJ92_1997 SM01298 DJ92_1997 DJ92_1998 SM00479 DJ92_1998 DJ92_2 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_2018 SM00871 Bacterial transcription activator, effector binding domain DJ92_2031 SM00382 ATPases associated with a variety of cellular activities DJ92_2046 SM00327 von Willebrand factor (vWF) type A domain DJ92_2047 SM00028 Tetratricopeptide repeats DJ92_2048 SM00421 helix_turn_helix, Lux Regulon DJ92_2051 SM00382 ATPases associated with a variety of cellular activities DJ92_2062 SM00422 helix_turn_helix, mercury resistance DJ92_2064 SM00855 Phosphoglycerate mutase family DJ92_2067 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_207 SM00642 Alpha-amylase domain DJ92_2073 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_2074 SM00382 ATPases associated with a variety of cellular activities DJ92_2081 SM00382 ATPases associated with a variety of cellular activities DJ92_2084 SM00382 ATPases associated with a variety of cellular activities DJ92_2084 SM00930 DJ92_2084 DJ92_2087 SM00493 DJ92_2087 DJ92_2096 SM00849 Metallo-beta-lactamase superfamily DJ92_2098 SM00530 Helix-turn-helix XRE-family like proteins DJ92_2121 SM00530 Helix-turn-helix XRE-family like proteins DJ92_2126 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_2131 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_2150 SM00363 S4 RNA-binding domain DJ92_2155 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain DJ92_2166 SM00014 Acid phosphatase homologues DJ92_2175 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_2175 SM00357 Cold shock protein domain DJ92_2175 SM00955 DJ92_2175 DJ92_2181 SM01192 DJ92_2181 DJ92_2181 SM01193 DJ92_2181 DJ92_2185 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DJ92_219 SM00248 ankyrin repeats DJ92_2198 SM00100 Cyclic nucleotide-monophosphate binding domain DJ92_2198 SM00419 helix_turn_helix, cAMP Regulatory protein DJ92_2201 SM00849 Metallo-beta-lactamase superfamily DJ92_2205 SM00100 Cyclic nucleotide-monophosphate binding domain DJ92_2205 SM00419 helix_turn_helix, cAMP Regulatory protein DJ92_2218 SM00028 Tetratricopeptide repeats DJ92_2225 SM00487 DEAD-like helicases superfamily DJ92_2225 SM00490 helicase superfamily c-terminal domain DJ92_2229 SM00422 helix_turn_helix, mercury resistance DJ92_223 SM00860 SMI1 / KNR4 family DJ92_2232 SM00422 helix_turn_helix, mercury resistance DJ92_2237 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_2237 SM00245 tail specific protease DJ92_2239 SM00382 ATPases associated with a variety of cellular activities DJ92_2241 SM00937 DJ92_2241 DJ92_2242 SM00957 SecA DEAD-like domain DJ92_2242 SM00958 SecA preprotein cross-linking domain DJ92_2244 SM00357 Cold shock protein domain DJ92_2246 SM00487 DEAD-like helicases superfamily DJ92_2246 SM00490 helicase superfamily c-terminal domain DJ92_2253 SM00984 UDP binding domain DJ92_2256 SM00382 ATPases associated with a variety of cellular activities DJ92_2257 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DJ92_2265 SM00850 LytTr DNA-binding domain DJ92_2285 SM00287 Bacterial SH3 domain homologues DJ92_2289 SM00287 Bacterial SH3 domain homologues DJ92_2295 SM00487 DEAD-like helicases superfamily DJ92_2295 SM00490 helicase superfamily c-terminal domain DJ92_2304 SM00382 ATPases associated with a variety of cellular activities DJ92_2311 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_2311 SM00387 Histidine kinase-like ATPases DJ92_2311 SM00388 His Kinase A (phosphoacceptor) domain DJ92_2312 SM00448 cheY-homologous receiver domain DJ92_2312 SM00862 Transcriptional regulatory protein, C terminal DJ92_232 SM00327 von Willebrand factor (vWF) type A domain DJ92_2327 SM00984 UDP binding domain DJ92_2337 SM00382 ATPases associated with a variety of cellular activities DJ92_2368 SM00382 ATPases associated with a variety of cellular activities DJ92_2379 SM00382 ATPases associated with a variety of cellular activities DJ92_2380 SM00850 LytTr DNA-binding domain DJ92_2400 SM00382 ATPases associated with a variety of cellular activities DJ92_241 SM01011 Aminopeptidase P, N-terminal domain DJ92_2413 SM00226 Low molecular weight phosphatase family DJ92_2416 SM00903 Flavin reductase like domain DJ92_2423 SM00937 DJ92_2423 DJ92_2426 SM00357 Cold shock protein domain DJ92_2426 SM00382 ATPases associated with a variety of cellular activities DJ92_2426 SM00959 Rho termination factor, N-terminal domain DJ92_2430 SM00448 cheY-homologous receiver domain DJ92_2440 SM00155 Phospholipase D. Active site motifs. DJ92_2443 SM00530 Helix-turn-helix XRE-family like proteins DJ92_2445 SM00421 helix_turn_helix, Lux Regulon DJ92_2445 SM00448 cheY-homologous receiver domain DJ92_2448 SM00382 ATPases associated with a variety of cellular activities DJ92_2452 SM00836 DALR anticodon binding domain DJ92_2452 SM01016 Arginyl tRNA synthetase N terminal dom DJ92_2460 SM00422 helix_turn_helix, mercury resistance DJ92_2466 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_2468 SM00382 ATPases associated with a variety of cellular activities DJ92_247 SM00860 SMI1 / KNR4 family DJ92_2477 SM00936 Penicillin-binding protein 5, C-terminal domain DJ92_2486 SM00986 Uracil DNA glycosylase superfamily DJ92_2486 SM00987 UreE urease accessory protein, C-terminal domain DJ92_2488 SM00382 ATPases associated with a variety of cellular activities DJ92_2490 SM00354 helix_turn _helix lactose operon repressor DJ92_2500 SM00100 Cyclic nucleotide-monophosphate binding domain DJ92_2502 SM00421 helix_turn_helix, Lux Regulon DJ92_2502 SM00448 cheY-homologous receiver domain DJ92_2503 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ92_2507 SM00448 cheY-homologous receiver domain DJ92_2507 SM00850 LytTr DNA-binding domain DJ92_2519 SM00382 ATPases associated with a variety of cellular activities DJ92_2529 SM00448 cheY-homologous receiver domain DJ92_2529 SM00850 LytTr DNA-binding domain DJ92_2530 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ92_2530 SM00387 Histidine kinase-like ATPases DJ92_2541 SM00487 DEAD-like helicases superfamily DJ92_2541 SM00490 helicase superfamily c-terminal domain DJ92_2545 SM00448 cheY-homologous receiver domain DJ92_2546 SM00387 Histidine kinase-like ATPases DJ92_2548 SM01240 DJ92_2548 DJ92_2552 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_2553 SM00849 Metallo-beta-lactamase superfamily DJ92_2556 SM00091 PAS domain DJ92_2556 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_2556 SM00387 Histidine kinase-like ATPases DJ92_2556 SM00388 His Kinase A (phosphoacceptor) domain DJ92_2557 SM00448 cheY-homologous receiver domain DJ92_2557 SM00862 Transcriptional regulatory protein, C terminal DJ92_2562 SM00788 Adenylosuccinate synthetase DJ92_2565 SM00267 diguanylate cyclase DJ92_2574 SM00470 ParB-like nuclease domain DJ92_2576 SM00470 ParB-like nuclease domain DJ92_2578 SM01228 DJ92_2578 DJ92_2580 SM00393 Putative single-stranded nucleic acids-binding domain DJ92_2580 SM01245 DJ92_2580 DJ92_2584 SM00382 ATPases associated with a variety of cellular activities DJ92_2584 SM00760 Bacterial dnaA protein helix-turn-helix domain DJ92_2585 SM00480 DNA polymerase III beta subunit DJ92_2588 SM00387 Histidine kinase-like ATPases DJ92_2588 SM00433 TopoisomeraseII DJ92_2589 SM00434 DNA Topoisomerase IV DJ92_2597 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_2597 SM01240 DJ92_2597 DJ92_2598 SM00936 Penicillin-binding protein 5, C-terminal domain DJ92_2608 SM00382 ATPases associated with a variety of cellular activities DJ92_2610 SM00493 DJ92_2610 DJ92_2628 SM00966 SpoVT / AbrB like domain DJ92_2631 SM00493 DJ92_2631 DJ92_2632 SM00650 Ribosomal RNA adenine dimethylases DJ92_2641 SM01400 DJ92_2641 DJ92_2644 SM00487 DEAD-like helicases superfamily DJ92_2644 SM00490 helicase superfamily c-terminal domain DJ92_2644 SM00982 DJ92_2644 DJ92_2644 SM01058 CarD-like/TRCF domain DJ92_2645 SM00966 SpoVT / AbrB like domain DJ92_2648 SM00363 S4 RNA-binding domain DJ92_2652 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_2655 SM00331 Sigma factor PP2C-like phosphatases DJ92_2655 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ92_2656 SM00977 TilS substrate C-terminal domain DJ92_2658 SM00382 ATPases associated with a variety of cellular activities DJ92_2666 SM00905 Dihydroneopterin aldolase DJ92_2668 SM00530 Helix-turn-helix XRE-family like proteins DJ92_2689 SM00382 ATPases associated with a variety of cellular activities DJ92_2689 SM01086 C-terminal, D2-small domain, of ClpB protein DJ92_2690 SM00382 ATPases associated with a variety of cellular activities DJ92_2692 SM00670 Large family of predicted nucleotide-binding domains DJ92_2697 SM00840 DJ92_2697 DJ92_2698 SM00535 Ribonuclease III family DJ92_2699 SM00967 RNA 2'-O ribose methyltransferase substrate binding DJ92_2701 SM00421 helix_turn_helix, Lux Regulon DJ92_2703 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. DJ92_2704 SM00649 Ribosomal protein L11/L12 DJ92_2710 SM00663 RNA polymerase I subunit A N-terminus DJ92_2714 SM00838 Elongation factor G C-terminus DJ92_2714 SM00889 Elongation factor G, domain IV DJ92_2716 SM01403 DJ92_2716 DJ92_2720 SM01382 DJ92_2720 DJ92_2720 SM01383 DJ92_2720 DJ92_2723 SM00322 K homology RNA-binding domain DJ92_2727 SM01374 DJ92_2727 DJ92_2728 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. DJ92_2740 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_2744 SM00662 RNA polymerases D DJ92_2746 SM00382 ATPases associated with a variety of cellular activities DJ92_2747 SM00382 ATPases associated with a variety of cellular activities DJ92_2753 SM00646 DJ92_2753 DJ92_2756 SM01251 DJ92_2756 DJ92_2783 SM00871 Bacterial transcription activator, effector binding domain DJ92_2784 SM00047 Lysozyme subfamily 2 DJ92_2799 SM00563 Phosphate acyltransferases DJ92_2816 SM00382 ATPases associated with a variety of cellular activities DJ92_2817 SM00387 Histidine kinase-like ATPases DJ92_2818 SM00421 helix_turn_helix, Lux Regulon DJ92_2818 SM00448 cheY-homologous receiver domain DJ92_2819 SM00382 ATPases associated with a variety of cellular activities DJ92_2826 SM00382 ATPases associated with a variety of cellular activities DJ92_2827 SM00382 ATPases associated with a variety of cellular activities DJ92_2841 SM00487 DEAD-like helicases superfamily DJ92_2841 SM00490 helicase superfamily c-terminal domain DJ92_2846 SM01005 Alanine racemase, C-terminal domain DJ92_2849 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_2849 SM00732 Likely ribonuclease with RNase H fold. DJ92_2851 SM00731 SprT homologues. DJ92_287 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_2875 SM00382 ATPases associated with a variety of cellular activities DJ92_2876 SM00881 CoA binding domain DJ92_2879 SM00883 Chaperonin 10 Kd subunit DJ92_2883 SM00448 cheY-homologous receiver domain DJ92_2883 SM00862 Transcriptional regulatory protein, C terminal DJ92_2884 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_2884 SM00387 Histidine kinase-like ATPases DJ92_2884 SM00388 His Kinase A (phosphoacceptor) domain DJ92_2896 SM01022 DJ92_2896 DJ92_2900 SM00382 ATPases associated with a variety of cellular activities DJ92_2901 SM00387 Histidine kinase-like ATPases DJ92_2901 SM00388 His Kinase A (phosphoacceptor) domain DJ92_2902 SM00448 cheY-homologous receiver domain DJ92_2902 SM00862 Transcriptional regulatory protein, C terminal DJ92_2911 SM01001 AIR carboxylase DJ92_2913 SM00998 Adenylosuccinate lyase C-terminus DJ92_2916 SM01211 DJ92_2916 DJ92_2921 SM00798 AICARFT/IMPCHase bienzyme DJ92_2921 SM00851 MGS-like domain DJ92_2922 SM01209 DJ92_2922 DJ92_2922 SM01210 DJ92_2922 DJ92_2923 SM00382 ATPases associated with a variety of cellular activities DJ92_2930 SM00244 prohibitin homologues DJ92_2934 SM00278 Helix-hairpin-helix DNA-binding motif class 1 DJ92_2934 SM00292 breast cancer carboxy-terminal domain DJ92_2934 SM00532 Ligase N family DJ92_2943 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_2947 SM00845 GatB domain DJ92_2948 SM00046 Diacylglycerol kinase catalytic domain (presumed) DJ92_2951 SM00091 PAS domain DJ92_2951 SM00382 ATPases associated with a variety of cellular activities DJ92_296 SM00382 ATPases associated with a variety of cellular activities DJ92_2965 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ92_2970 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ92_2970 SM01134 DJ92_2970 DJ92_2971 SM01007 Class II Aldolase and Adducin N-terminal domain DJ92_2982 SM00387 Histidine kinase-like ATPases DJ92_2989 SM00062 Bacterial periplasmic substrate-binding proteins DJ92_2989 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ92_2990 SM00382 ATPases associated with a variety of cellular activities DJ92_2997 SM00100 Cyclic nucleotide-monophosphate binding domain DJ92_2997 SM00419 helix_turn_helix, cAMP Regulatory protein DJ92_2999 SM00642 Alpha-amylase domain DJ92_30 SM00382 ATPases associated with a variety of cellular activities DJ92_3003 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ92_3003 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ92_3003 SM00493 DJ92_3003 DJ92_3006 SM00382 ATPases associated with a variety of cellular activities DJ92_3016 SM00382 ATPases associated with a variety of cellular activities DJ92_3017 SM00382 ATPases associated with a variety of cellular activities DJ92_3020 SM00382 ATPases associated with a variety of cellular activities DJ92_3020 SM00930 DJ92_3020 DJ92_3027 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3032 SM00946 Prolyl-tRNA synthetase, C-terminal DJ92_304 SM00829 Enoylreductase DJ92_3042 SM00831 Cation transporter/ATPase, N-terminus DJ92_3044 SM00226 Low molecular weight phosphatase family DJ92_3065 SM00478 endonuclease III DJ92_3071 SM00382 ATPases associated with a variety of cellular activities DJ92_3076 SM00530 Helix-turn-helix XRE-family like proteins DJ92_308 SM00382 ATPases associated with a variety of cellular activities DJ92_3097 SM00478 endonuclease III DJ92_3097 SM00525 DJ92_3097 DJ92_310 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3104 SM00382 ATPases associated with a variety of cellular activities DJ92_3107 SM00382 ATPases associated with a variety of cellular activities DJ92_3133 SM00645 Papain family cysteine protease DJ92_3139 SM00567 E-Z type HEAT repeats DJ92_3143 SM00763 PrkA AAA domain DJ92_3146 SM00244 prohibitin homologues DJ92_3147 SM00448 cheY-homologous receiver domain DJ92_3147 SM00862 Transcriptional regulatory protein, C terminal DJ92_3148 SM00387 Histidine kinase-like ATPases DJ92_3148 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3154 SM00248 ankyrin repeats DJ92_3157 SM00448 cheY-homologous receiver domain DJ92_3160 SM00710 Parallel beta-helix repeats DJ92_3163 SM00382 ATPases associated with a variety of cellular activities DJ92_3165 SM00248 ankyrin repeats DJ92_3168 SM00849 Metallo-beta-lactamase superfamily DJ92_3172 SM00382 ATPases associated with a variety of cellular activities DJ92_3176 SM00448 cheY-homologous receiver domain DJ92_3176 SM00862 Transcriptional regulatory protein, C terminal DJ92_3177 SM00387 Histidine kinase-like ATPases DJ92_3177 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3180 SM00387 Histidine kinase-like ATPases DJ92_3181 SM00448 cheY-homologous receiver domain DJ92_3183 SM00919 Malic enzyme, NAD binding domain DJ92_3183 SM01274 DJ92_3183 DJ92_3186 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_3188 SM00387 Histidine kinase-like ATPases DJ92_3188 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3189 SM00448 cheY-homologous receiver domain DJ92_3189 SM00862 Transcriptional regulatory protein, C terminal DJ92_3193 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ92_3193 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ92_3196 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ92_3196 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ92_3199 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_3202 SM00028 Tetratricopeptide repeats DJ92_3202 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3215 SM01091 Transporter associated domain DJ92_3218 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_3224 SM00382 ATPases associated with a variety of cellular activities DJ92_3229 SM00327 von Willebrand factor (vWF) type A domain DJ92_3230 SM00382 ATPases associated with a variety of cellular activities DJ92_3231 SM00155 Phospholipase D. Active site motifs. DJ92_3236 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_3236 SM00866 DJ92_3236 DJ92_3238 SM00642 Alpha-amylase domain DJ92_3241 SM00382 ATPases associated with a variety of cellular activities DJ92_3242 SM00062 Bacterial periplasmic substrate-binding proteins DJ92_3242 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ92_3247 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3247 SM00387 Histidine kinase-like ATPases DJ92_3247 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3248 SM00448 cheY-homologous receiver domain DJ92_3248 SM00862 Transcriptional regulatory protein, C terminal DJ92_3253 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_3255 SM00354 helix_turn _helix lactose operon repressor DJ92_3258 SM00382 ATPases associated with a variety of cellular activities DJ92_3263 SM00646 DJ92_3263 DJ92_3265 SM00829 Enoylreductase DJ92_3267 SM00770 Zinc dependent phospholipase C (alpha toxin) DJ92_3273 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3285 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3302 SM00899 DJ92_3302 DJ92_333 SM01091 Transporter associated domain DJ92_3332 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_3337 SM00382 ATPases associated with a variety of cellular activities DJ92_334 SM00422 helix_turn_helix, mercury resistance DJ92_3354 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_336 SM00326 Src homology 3 domains DJ92_3373 SM00450 Rhodanese Homology Domain DJ92_3375 SM00450 Rhodanese Homology Domain DJ92_3375 SM00849 Metallo-beta-lactamase superfamily DJ92_3377 SM00450 Rhodanese Homology Domain DJ92_3378 SM00450 Rhodanese Homology Domain DJ92_3390 SM00382 ATPases associated with a variety of cellular activities DJ92_3414 SM00849 Metallo-beta-lactamase superfamily DJ92_3418 SM00344 helix_turn_helix ASNC type DJ92_343 SM00849 Metallo-beta-lactamase superfamily DJ92_3430 SM00636 DJ92_3430 DJ92_3435 SM00382 ATPases associated with a variety of cellular activities DJ92_3436 SM00382 ATPases associated with a variety of cellular activities DJ92_3437 SM00062 Bacterial periplasmic substrate-binding proteins DJ92_3437 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. DJ92_3439 SM00382 ATPases associated with a variety of cellular activities DJ92_3449 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_3473 SM00421 helix_turn_helix, Lux Regulon DJ92_3473 SM00448 cheY-homologous receiver domain DJ92_3474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3474 SM00387 Histidine kinase-like ATPases DJ92_3484 SM00091 PAS domain DJ92_3484 SM00382 ATPases associated with a variety of cellular activities DJ92_3487 SM00091 PAS domain DJ92_3487 SM00387 Histidine kinase-like ATPases DJ92_3488 SM00448 cheY-homologous receiver domain DJ92_3506 SM00487 DEAD-like helicases superfamily DJ92_3506 SM00490 helicase superfamily c-terminal domain DJ92_3508 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. DJ92_3521 SM00342 helix_turn_helix, arabinose operon control protein DJ92_3528 SM00098 Alkaline phosphatase homologues DJ92_3541 SM00860 SMI1 / KNR4 family DJ92_3542 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins DJ92_3544 SM00770 Zinc dependent phospholipase C (alpha toxin) DJ92_3545 SM00382 ATPases associated with a variety of cellular activities DJ92_3546 SM00382 ATPases associated with a variety of cellular activities DJ92_3548 SM00421 helix_turn_helix, Lux Regulon DJ92_3548 SM00448 cheY-homologous receiver domain DJ92_3561 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_3575 SM01002 Alanine dehydrogenase/PNT, C-terminal domain DJ92_3575 SM01003 Alanine dehydrogenase/PNT, N-terminal domain DJ92_3585 SM00344 helix_turn_helix ASNC type DJ92_3597 SM00387 Histidine kinase-like ATPases DJ92_3597 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3599 SM00448 cheY-homologous receiver domain DJ92_3599 SM00862 Transcriptional regulatory protein, C terminal DJ92_36 SM00830 Chorismate mutase type II DJ92_3601 SM00646 DJ92_3601 DJ92_3604 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3604 SM00387 Histidine kinase-like ATPases DJ92_3604 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3606 SM00382 ATPases associated with a variety of cellular activities DJ92_3631 SM01120 DJ92_3631 DJ92_3636 SM00382 ATPases associated with a variety of cellular activities DJ92_3637 SM00448 cheY-homologous receiver domain DJ92_3637 SM00862 Transcriptional regulatory protein, C terminal DJ92_3638 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3638 SM00387 Histidine kinase-like ATPases DJ92_3638 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3641 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3641 SM00387 Histidine kinase-like ATPases DJ92_3641 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3642 SM00448 cheY-homologous receiver domain DJ92_3642 SM00862 Transcriptional regulatory protein, C terminal DJ92_3646 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_3649 SM00342 helix_turn_helix, arabinose operon control protein DJ92_3654 SM00422 helix_turn_helix, mercury resistance DJ92_3665 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_3668 SM00028 Tetratricopeptide repeats DJ92_3681 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_3685 SM00382 ATPases associated with a variety of cellular activities DJ92_3690 SM00448 cheY-homologous receiver domain DJ92_3690 SM00862 Transcriptional regulatory protein, C terminal DJ92_3691 SM00387 Histidine kinase-like ATPases DJ92_3691 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3695 SM00460 Transglutaminase/protease-like homologues DJ92_3699 SM00287 Bacterial SH3 domain homologues DJ92_3699 SM00641 Glycosyl hydrolases family 25 DJ92_3725 SM00354 helix_turn _helix lactose operon repressor DJ92_3727 SM00849 Metallo-beta-lactamase superfamily DJ92_3733 SM00342 helix_turn_helix, arabinose operon control protein DJ92_3733 SM00871 Bacterial transcription activator, effector binding domain DJ92_3734 SM00387 Histidine kinase-like ATPases DJ92_3734 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3735 SM00448 cheY-homologous receiver domain DJ92_3735 SM00862 Transcriptional regulatory protein, C terminal DJ92_3748 SM00357 Cold shock protein domain DJ92_3751 SM00091 PAS domain DJ92_3751 SM00387 Histidine kinase-like ATPases DJ92_3751 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3771 SM00257 Lysin motif DJ92_3773 SM01060 DJ92_3773 DJ92_3775 SM00642 Alpha-amylase domain DJ92_3778 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_378 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_3786 SM00382 ATPases associated with a variety of cellular activities DJ92_3786 SM01086 C-terminal, D2-small domain, of ClpB protein DJ92_3792 SM00825 Beta-ketoacyl synthase DJ92_3800 SM00382 ATPases associated with a variety of cellular activities DJ92_3801 SM00382 ATPases associated with a variety of cellular activities DJ92_3808 SM00155 Phospholipase D. Active site motifs. DJ92_381 SM01209 DJ92_381 DJ92_3814 SM01118 DJ92_3814 DJ92_3816 SM00954 Region found in RelA / SpoT proteins DJ92_382 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_3823 SM00858 DJ92_3823 DJ92_3834 SM00422 helix_turn_helix, mercury resistance DJ92_385 SM00966 SpoVT / AbrB like domain DJ92_3860 SM00635 Bacterial Ig-like domain 2 DJ92_3878 SM01324 DJ92_3878 DJ92_3886 SM00861 Transketolase, pyrimidine binding domain DJ92_3887 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3900 SM00857 Resolvase, N terminal domain DJ92_391 SM00849 Metallo-beta-lactamase superfamily DJ92_3910 SM01040 BRO family, N-terminal domain DJ92_3915 SM00028 Tetratricopeptide repeats DJ92_3929 SM00530 Helix-turn-helix XRE-family like proteins DJ92_3933 SM00382 ATPases associated with a variety of cellular activities DJ92_3937 SM00014 Acid phosphatase homologues DJ92_394 SM00382 ATPases associated with a variety of cellular activities DJ92_3947 SM00448 cheY-homologous receiver domain DJ92_3947 SM00862 Transcriptional regulatory protein, C terminal DJ92_3948 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_3948 SM00387 Histidine kinase-like ATPases DJ92_3948 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3949 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_3949 SM00895 DJ92_3949 DJ92_396 SM00849 Metallo-beta-lactamase superfamily DJ92_3963 SM00822 DJ92_3963 DJ92_3971 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ92_3971 SM01134 DJ92_3971 DJ92_3972 SM01007 Class II Aldolase and Adducin N-terminal domain DJ92_3976 SM00387 Histidine kinase-like ATPases DJ92_3976 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3977 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_3981 SM00387 Histidine kinase-like ATPases DJ92_3981 SM00388 His Kinase A (phosphoacceptor) domain DJ92_3998 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_4001 SM00091 PAS domain DJ92_4001 SM00382 ATPases associated with a variety of cellular activities DJ92_4006 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_4007 SM00382 ATPases associated with a variety of cellular activities DJ92_4009 SM00382 ATPases associated with a variety of cellular activities DJ92_4014 SM00344 helix_turn_helix ASNC type DJ92_4038 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_4050 SM00917 LeuA allosteric (dimerisation) domain DJ92_4051 SM01329 DJ92_4051 DJ92_408 SM00387 Histidine kinase-like ATPases DJ92_4088 SM00387 Histidine kinase-like ATPases DJ92_4089 SM00421 helix_turn_helix, Lux Regulon DJ92_4089 SM00448 cheY-homologous receiver domain DJ92_409 SM00448 cheY-homologous receiver domain DJ92_409 SM00862 Transcriptional regulatory protein, C terminal DJ92_4105 SM00091 PAS domain DJ92_4105 SM00387 Histidine kinase-like ATPases DJ92_4105 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4110 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_4110 SM00387 Histidine kinase-like ATPases DJ92_4110 SM00388 His Kinase A (phosphoacceptor) domain DJ92_412 SM00382 ATPases associated with a variety of cellular activities DJ92_4120 SM00363 S4 RNA-binding domain DJ92_4124 SM00448 cheY-homologous receiver domain DJ92_4124 SM00862 Transcriptional regulatory protein, C terminal DJ92_4125 SM00091 PAS domain DJ92_4125 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_4125 SM00387 Histidine kinase-like ATPases DJ92_4125 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4127 SM00257 Lysin motif DJ92_4132 SM00487 DEAD-like helicases superfamily DJ92_4132 SM00490 helicase superfamily c-terminal domain DJ92_4134 SM00257 Lysin motif DJ92_4136 SM00422 helix_turn_helix, mercury resistance DJ92_4138 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DJ92_414 SM00342 helix_turn_helix, arabinose operon control protein DJ92_414 SM00871 Bacterial transcription activator, effector binding domain DJ92_4140 SM00644 DJ92_4140 DJ92_4142 SM00870 DJ92_4142 DJ92_4145 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_4146 SM01240 DJ92_4146 DJ92_4148 SM00421 helix_turn_helix, Lux Regulon DJ92_4159 SM00411 bacterial (prokaryotic) histone like domain DJ92_4164 SM00562 DJ92_4164 DJ92_4170 SM00028 Tetratricopeptide repeats DJ92_4171 SM00914 DJ92_4171 DJ92_418 SM00382 ATPases associated with a variety of cellular activities DJ92_4180 SM00986 Uracil DNA glycosylase superfamily DJ92_4180 SM00987 UreE urease accessory protein, C-terminal domain DJ92_4184 SM00851 MGS-like domain DJ92_4192 SM00479 DJ92_4192 DJ92_4192 SM00487 DEAD-like helicases superfamily DJ92_4192 SM00491 DJ92_4192 DJ92_4197 SM00478 endonuclease III DJ92_4199 SM00060 Fibronectin type 3 domain DJ92_420 SM00644 DJ92_420 DJ92_4210 SM00981 DJ92_4210 DJ92_4212 SM00491 DJ92_4212 DJ92_4215 SM00860 SMI1 / KNR4 family DJ92_4227 SM00450 Rhodanese Homology Domain DJ92_4233 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs DJ92_4233 SM00475 5'-3' exonuclease DJ92_4247 SM00357 Cold shock protein domain DJ92_425 SM00825 Beta-ketoacyl synthase DJ92_4257 SM00422 helix_turn_helix, mercury resistance DJ92_4257 SM00871 Bacterial transcription activator, effector binding domain DJ92_426 SM00530 Helix-turn-helix XRE-family like proteins DJ92_4264 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_4266 SM00382 ATPases associated with a variety of cellular activities DJ92_4283 SM00530 Helix-turn-helix XRE-family like proteins DJ92_4289 SM00835 Cupin DJ92_4291 SM00855 Phosphoglycerate mutase family DJ92_4295 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_4302 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_4302 SM00895 DJ92_4302 DJ92_4305 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ92_432 SM00382 ATPases associated with a variety of cellular activities DJ92_4326 SM00421 helix_turn_helix, Lux Regulon DJ92_4326 SM00448 cheY-homologous receiver domain DJ92_4328 SM00382 ATPases associated with a variety of cellular activities DJ92_4332 SM00155 Phospholipase D. Active site motifs. DJ92_4339 SM00919 Malic enzyme, NAD binding domain DJ92_4339 SM01274 DJ92_4339 DJ92_4340 SM00387 Histidine kinase-like ATPases DJ92_4341 SM00448 cheY-homologous receiver domain DJ92_4343 SM00849 Metallo-beta-lactamase superfamily DJ92_4344 SM00487 DEAD-like helicases superfamily DJ92_4344 SM00490 helicase superfamily c-terminal domain DJ92_4348 SM00382 ATPases associated with a variety of cellular activities DJ92_4352 SM00387 Histidine kinase-like ATPases DJ92_4352 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4353 SM00448 cheY-homologous receiver domain DJ92_4353 SM00862 Transcriptional regulatory protein, C terminal DJ92_4367 SM00014 Acid phosphatase homologues DJ92_4373 SM00382 ATPases associated with a variety of cellular activities DJ92_4392 SM00854 Bacterial capsule synthesis protein PGA_cap DJ92_4396 SM00382 ATPases associated with a variety of cellular activities DJ92_4397 SM00448 cheY-homologous receiver domain DJ92_4397 SM00862 Transcriptional regulatory protein, C terminal DJ92_4398 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_4398 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4399 SM00387 Histidine kinase-like ATPases DJ92_4415 SM00155 Phospholipase D. Active site motifs. DJ92_4417 SM00641 Glycosyl hydrolases family 25 DJ92_4426 SM00448 cheY-homologous receiver domain DJ92_4426 SM00862 Transcriptional regulatory protein, C terminal DJ92_4427 SM00387 Histidine kinase-like ATPases DJ92_4427 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4430 SM00450 Rhodanese Homology Domain DJ92_4435 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) DJ92_4435 SM00091 PAS domain DJ92_4435 SM00387 Histidine kinase-like ATPases DJ92_4435 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4437 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_4437 SM00387 Histidine kinase-like ATPases DJ92_4438 SM00421 helix_turn_helix, Lux Regulon DJ92_4438 SM00448 cheY-homologous receiver domain DJ92_4445 SM01133 DJ92_4445 DJ92_4447 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain DJ92_4449 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DJ92_4450 SM01092 CO dehydrogenase flavoprotein C-terminal domain DJ92_4459 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ92_4459 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ92_4459 SM00493 DJ92_4459 DJ92_4460 SM00926 Molybdopterin oxidoreductase Fe4S4 domain DJ92_4460 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DJ92_4464 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_4467 SM00852 Probable molybdopterin binding domain DJ92_4472 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_4491 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ92_4494 SM00382 ATPases associated with a variety of cellular activities DJ92_4495 SM00382 ATPases associated with a variety of cellular activities DJ92_450 SM01276 DJ92_450 DJ92_4510 SM00287 Bacterial SH3 domain homologues DJ92_4512 SM00387 Histidine kinase-like ATPases DJ92_4518 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_4526 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_4528 SM00226 Low molecular weight phosphatase family DJ92_4530 SM00382 ATPases associated with a variety of cellular activities DJ92_4550 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_4556 SM00460 Transglutaminase/protease-like homologues DJ92_4563 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_4583 SM00833 Cobalamin synthesis protein cobW C-terminal domain DJ92_4595 SM00855 Phosphoglycerate mutase family DJ92_4606 SM00155 Phospholipase D. Active site motifs. DJ92_4612 SM01091 Transporter associated domain DJ92_462 SM00829 Enoylreductase DJ92_4627 SM00244 prohibitin homologues DJ92_4630 SM00346 helix_turn_helix isocitrate lyase regulation DJ92_4637 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ92_464 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ92_464 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ92_4641 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_4643 SM01005 Alanine racemase, C-terminal domain DJ92_4647 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_4677 SM00966 SpoVT / AbrB like domain DJ92_4683 SM00382 ATPases associated with a variety of cellular activities DJ92_4699 SM00487 DEAD-like helicases superfamily DJ92_4699 SM00490 helicase superfamily c-terminal domain DJ92_4701 SM00829 Enoylreductase DJ92_4705 SM00849 Metallo-beta-lactamase superfamily DJ92_4722 SM00644 DJ92_4722 DJ92_4735 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_4736 SM00382 ATPases associated with a variety of cellular activities DJ92_4742 SM00567 E-Z type HEAT repeats DJ92_4742 SM00932 Scaffold protein Nfu/NifU N terminal DJ92_4746 SM00836 DALR anticodon binding domain DJ92_4746 SM01016 Arginyl tRNA synthetase N terminal dom DJ92_476 SM00422 helix_turn_helix, mercury resistance DJ92_4760 SM00382 ATPases associated with a variety of cellular activities DJ92_4766 SM00028 Tetratricopeptide repeats DJ92_4778 SM00382 ATPases associated with a variety of cellular activities DJ92_4779 SM00387 Histidine kinase-like ATPases DJ92_4779 SM00421 helix_turn_helix, Lux Regulon DJ92_4779 SM00448 cheY-homologous receiver domain DJ92_4791 SM00382 ATPases associated with a variety of cellular activities DJ92_4801 SM00563 Phosphate acyltransferases DJ92_4813 SM00287 Bacterial SH3 domain homologues DJ92_4813 SM00646 DJ92_4813 DJ92_4818 SM00342 helix_turn_helix, arabinose operon control protein DJ92_4818 SM00871 Bacterial transcription activator, effector binding domain DJ92_4820 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. DJ92_4821 SM00421 helix_turn_helix, Lux Regulon DJ92_4821 SM00448 cheY-homologous receiver domain DJ92_4830 SM00382 ATPases associated with a variety of cellular activities DJ92_4839 SM01091 Transporter associated domain DJ92_4841 SM00387 Histidine kinase-like ATPases DJ92_4841 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4844 SM00382 ATPases associated with a variety of cellular activities DJ92_4847 SM00882 Coenzyme A transferase DJ92_4848 SM00882 Coenzyme A transferase DJ92_485 SM00382 ATPases associated with a variety of cellular activities DJ92_4851 SM00382 ATPases associated with a variety of cellular activities DJ92_4859 SM00219 Tyrosine kinase, catalytic domain DJ92_4862 SM00014 Acid phosphatase homologues DJ92_4890 SM00028 Tetratricopeptide repeats DJ92_4903 SM00382 ATPases associated with a variety of cellular activities DJ92_4907 SM00823 Phosphopantetheine attachment site DJ92_4908 SM00823 Phosphopantetheine attachment site DJ92_4909 SM00823 Phosphopantetheine attachment site DJ92_4922 SM00448 cheY-homologous receiver domain DJ92_4922 SM00862 Transcriptional regulatory protein, C terminal DJ92_4923 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_4923 SM00387 Histidine kinase-like ATPases DJ92_4923 SM00388 His Kinase A (phosphoacceptor) domain DJ92_4932 SM00091 PAS domain DJ92_4932 SM00382 ATPases associated with a variety of cellular activities DJ92_4937 SM00530 Helix-turn-helix XRE-family like proteins DJ92_494 SM00422 helix_turn_helix, mercury resistance DJ92_494 SM00871 Bacterial transcription activator, effector binding domain DJ92_4947 SM00823 Phosphopantetheine attachment site DJ92_4947 SM00824 Thioesterase DJ92_4948 SM00923 MbtH-like protein DJ92_4952 SM00411 bacterial (prokaryotic) histone like domain DJ92_4955 SM00849 Metallo-beta-lactamase superfamily DJ92_4962 SM00363 S4 RNA-binding domain DJ92_4963 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_4964 SM00382 ATPases associated with a variety of cellular activities DJ92_4966 SM00422 helix_turn_helix, mercury resistance DJ92_4998 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_5009 SM00855 Phosphoglycerate mutase family DJ92_5011 SM00855 Phosphoglycerate mutase family DJ92_5018 SM00357 Cold shock protein domain DJ92_5021 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_5026 SM01350 DJ92_5026 DJ92_5030 SM00382 ATPases associated with a variety of cellular activities DJ92_5031 SM00382 ATPases associated with a variety of cellular activities DJ92_5034 SM00835 Cupin DJ92_5037 SM01065 Starch binding domain DJ92_5046 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase DJ92_5054 SM01207 DJ92_5054 DJ92_5059 SM00487 DEAD-like helicases superfamily DJ92_5059 SM00490 helicase superfamily c-terminal domain DJ92_5063 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_5064 SM00855 Phosphoglycerate mutase family DJ92_5072 SM00382 ATPases associated with a variety of cellular activities DJ92_5080 SM00382 ATPases associated with a variety of cellular activities DJ92_5082 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_5088 SM00878 Biotin carboxylase C-terminal domain DJ92_5094 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_51 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5102 SM00387 Histidine kinase-like ATPases DJ92_5102 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5103 SM00448 cheY-homologous receiver domain DJ92_5103 SM00862 Transcriptional regulatory protein, C terminal DJ92_5112 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_5118 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. DJ92_5120 SM00014 Acid phosphatase homologues DJ92_5121 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_5129 SM00465 GIY-YIG type nucleases (URI domain) DJ92_5170 SM00014 Acid phosphatase homologues DJ92_5171 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_5171 SM00387 Histidine kinase-like ATPases DJ92_5171 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5172 SM00448 cheY-homologous receiver domain DJ92_5172 SM00862 Transcriptional regulatory protein, C terminal DJ92_5176 SM00387 Histidine kinase-like ATPases DJ92_5176 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5181 SM00382 ATPases associated with a variety of cellular activities DJ92_5184 SM00091 PAS domain DJ92_5184 SM00387 Histidine kinase-like ATPases DJ92_5184 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5201 SM00849 Metallo-beta-lactamase superfamily DJ92_5207 SM00382 ATPases associated with a variety of cellular activities DJ92_5208 SM00387 Histidine kinase-like ATPases DJ92_5209 SM00448 cheY-homologous receiver domain DJ92_5209 SM00862 Transcriptional regulatory protein, C terminal DJ92_521 SM00710 Parallel beta-helix repeats DJ92_5212 SM00421 helix_turn_helix, Lux Regulon DJ92_5212 SM00448 cheY-homologous receiver domain DJ92_523 SM00479 DJ92_523 DJ92_524 SM00357 Cold shock protein domain DJ92_5246 SM00116 Domain in cystathionine beta-synthase and other proteins. DJ92_5246 SM00382 ATPases associated with a variety of cellular activities DJ92_527 SM01022 DJ92_527 DJ92_5283 SM00028 Tetratricopeptide repeats DJ92_5289 SM00341 Helicase and RNase D C-terminal DJ92_5289 SM00487 DEAD-like helicases superfamily DJ92_5289 SM00490 helicase superfamily c-terminal domain DJ92_5289 SM00956 DJ92_5289 DJ92_5294 SM01131 DJ92_5294 DJ92_5298 SM01130 DJ92_5298 DJ92_5302 SM00091 PAS domain DJ92_5302 SM00382 ATPases associated with a variety of cellular activities DJ92_5320 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain DJ92_5327 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DJ92_5330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_5330 SM00387 Histidine kinase-like ATPases DJ92_5330 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5331 SM00448 cheY-homologous receiver domain DJ92_5331 SM00862 Transcriptional regulatory protein, C terminal DJ92_5342 SM00770 Zinc dependent phospholipase C (alpha toxin) DJ92_5359 SM00382 ATPases associated with a variety of cellular activities DJ92_5361 SM00850 LytTr DNA-binding domain DJ92_538 SM00822 DJ92_538 DJ92_5390 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5392 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5393 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5394 SM01040 BRO family, N-terminal domain DJ92_5416 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5427 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5439 SM00857 Resolvase, N terminal domain DJ92_5442 SM00387 Histidine kinase-like ATPases DJ92_5442 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5448 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_5456 SM01058 CarD-like/TRCF domain DJ92_5461 SM00014 Acid phosphatase homologues DJ92_5465 SM00422 helix_turn_helix, mercury resistance DJ92_5484 SM00155 Phospholipase D. Active site motifs. DJ92_5485 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_5494 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5504 SM00857 Resolvase, N terminal domain DJ92_5509 SM00382 ATPases associated with a variety of cellular activities DJ92_5512 SM01207 DJ92_5512 DJ92_5518 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_5529 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5543 SM00014 Acid phosphatase homologues DJ92_5545 SM00382 ATPases associated with a variety of cellular activities DJ92_5559 SM00829 Enoylreductase DJ92_5576 SM00387 Histidine kinase-like ATPases DJ92_5577 SM00448 cheY-homologous receiver domain DJ92_5589 SM00857 Resolvase, N terminal domain DJ92_5593 SM00530 Helix-turn-helix XRE-family like proteins DJ92_560 SM00382 ATPases associated with a variety of cellular activities DJ92_5600 SM01126 DJ92_5600 DJ92_5603 SM00857 Resolvase, N terminal domain DJ92_5618 SM00857 Resolvase, N terminal domain DJ92_5633 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5642 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5656 SM00966 SpoVT / AbrB like domain DJ92_5664 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ92_5664 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ92_5664 SM00493 DJ92_5664 DJ92_5676 SM00507 HNH nucleases DJ92_5681 SM01209 DJ92_5681 DJ92_5688 SM00382 ATPases associated with a variety of cellular activities DJ92_5689 SM00382 ATPases associated with a variety of cellular activities DJ92_5697 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_5702 SM00382 ATPases associated with a variety of cellular activities DJ92_5703 SM00448 cheY-homologous receiver domain DJ92_5703 SM00862 Transcriptional regulatory protein, C terminal DJ92_5704 SM00388 His Kinase A (phosphoacceptor) domain DJ92_5706 SM00530 Helix-turn-helix XRE-family like proteins DJ92_571 SM00434 DNA Topoisomerase IV DJ92_572 SM00387 Histidine kinase-like ATPases DJ92_572 SM00433 TopoisomeraseII DJ92_573 SM00881 CoA binding domain DJ92_574 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_575 SM00448 cheY-homologous receiver domain DJ92_575 SM00862 Transcriptional regulatory protein, C terminal DJ92_5759 SM00829 Enoylreductase DJ92_5760 SM00871 Bacterial transcription activator, effector binding domain DJ92_5763 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5779 SM01126 DJ92_5779 DJ92_578 SM01207 DJ92_578 DJ92_5788 SM01321 DJ92_5788 DJ92_5790 SM00422 helix_turn_helix, mercury resistance DJ92_5792 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ92_581 SM00257 Lysin motif DJ92_581 SM00636 DJ92_581 DJ92_5811 SM00966 SpoVT / AbrB like domain DJ92_5813 SM01126 DJ92_5813 DJ92_5814 SM00996 S-adenosyl-L-homocysteine hydrolase DJ92_5814 SM00997 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DJ92_5829 SM00422 helix_turn_helix, mercury resistance DJ92_5830 SM00530 Helix-turn-helix XRE-family like proteins DJ92_5837 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_585 SM00479 DJ92_585 DJ92_596 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain DJ92_60 SM00382 ATPases associated with a variety of cellular activities DJ92_603 SM00644 DJ92_603 DJ92_603 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. DJ92_604 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ92_607 SM00091 PAS domain DJ92_607 SM00387 Histidine kinase-like ATPases DJ92_607 SM00388 His Kinase A (phosphoacceptor) domain DJ92_610 SM01058 CarD-like/TRCF domain DJ92_627 SM00382 ATPases associated with a variety of cellular activities DJ92_634 SM00346 helix_turn_helix isocitrate lyase regulation DJ92_64 SM01133 DJ92_64 DJ92_643 SM00382 ATPases associated with a variety of cellular activities DJ92_644 SM00382 ATPases associated with a variety of cellular activities DJ92_647 SM00861 Transketolase, pyrimidine binding domain DJ92_652 SM00857 Resolvase, N terminal domain DJ92_663 SM00460 Transglutaminase/protease-like homologues DJ92_669 SM00028 Tetratricopeptide repeats DJ92_67 SM00849 Metallo-beta-lactamase superfamily DJ92_680 SM01230 DJ92_680 DJ92_681 SM00422 helix_turn_helix, mercury resistance DJ92_687 SM00382 ATPases associated with a variety of cellular activities DJ92_693 SM00287 Bacterial SH3 domain homologues DJ92_696 SM00420 helix_turn_helix, Deoxyribose operon repressor DJ92_696 SM01134 DJ92_696 DJ92_704 SM00411 bacterial (prokaryotic) histone like domain DJ92_708 SM00382 ATPases associated with a variety of cellular activities DJ92_713 SM00342 helix_turn_helix, arabinose operon control protein DJ92_715 SM00478 endonuclease III DJ92_724 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_728 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_728 SM00387 Histidine kinase-like ATPases DJ92_728 SM00388 His Kinase A (phosphoacceptor) domain DJ92_73 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor DJ92_730 SM00382 ATPases associated with a variety of cellular activities DJ92_742 SM00382 ATPases associated with a variety of cellular activities DJ92_743 SM00387 Histidine kinase-like ATPases DJ92_743 SM00388 His Kinase A (phosphoacceptor) domain DJ92_744 SM00448 cheY-homologous receiver domain DJ92_744 SM00862 Transcriptional regulatory protein, C terminal DJ92_747 SM00382 ATPases associated with a variety of cellular activities DJ92_749 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain DJ92_749 SM00387 Histidine kinase-like ATPases DJ92_749 SM00388 His Kinase A (phosphoacceptor) domain DJ92_750 SM00862 Transcriptional regulatory protein, C terminal DJ92_776 SM00382 ATPases associated with a variety of cellular activities DJ92_802 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_811 SM00853 MutL C terminal dimerisation domain DJ92_811 SM01340 DJ92_811 DJ92_812 SM00533 DNA-binding domain of DNA mismatch repair MUTS family DJ92_812 SM00534 ATPase domain of DNA mismatch repair MUTS family DJ92_815 SM00729 Elongator protein 3, MiaB family, Radical SAM DJ92_821 SM00322 K homology RNA-binding domain DJ92_821 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. DJ92_822 SM00382 ATPases associated with a variety of cellular activities DJ92_823 SM00852 Probable molybdopterin binding domain DJ92_833 SM00382 ATPases associated with a variety of cellular activities DJ92_835 SM00345 helix_turn_helix gluconate operon transcriptional repressor DJ92_835 SM00866 DJ92_835 DJ92_836 SM00382 ATPases associated with a variety of cellular activities DJ92_836 SM00843 DJ92_836 DJ92_839 SM00849 Metallo-beta-lactamase superfamily DJ92_840 SM01130 DJ92_840 DJ92_842 SM00859 Semialdehyde dehydrogenase, NAD binding domain DJ92_848 SM00028 Tetratricopeptide repeats DJ92_849 SM00644 DJ92_849 DJ92_863 SM00507 HNH nucleases DJ92_883 SM00530 Helix-turn-helix XRE-family like proteins DJ92_884 SM00530 Helix-turn-helix XRE-family like proteins DJ92_887 SM00857 Resolvase, N terminal domain DJ92_89 SM00347 helix_turn_helix multiple antibiotic resistance protein DJ92_893 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_893 SM00322 K homology RNA-binding domain DJ92_894 SM01387 DJ92_894 DJ92_895 SM00904 Riboflavin kinase DJ92_90 SM00889 Elongation factor G, domain IV DJ92_902 SM00316 Ribosomal protein S1-like RNA-binding domain DJ92_902 SM00322 K homology RNA-binding domain DJ92_905 SM00479 DJ92_905 DJ92_905 SM00481 DNA polymerase alpha chain like domain DJ92_907 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. DJ92_916 SM00382 ATPases associated with a variety of cellular activities DJ92_916 SM01086 C-terminal, D2-small domain, of ClpB protein DJ92_920 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain DJ92_920 SM00437 Bacterial DNA topoisomerase I DNA-binding domain DJ92_920 SM00493 DJ92_920 DJ92_922 SM00881 CoA binding domain DJ92_932 SM00382 ATPases associated with a variety of cellular activities DJ92_932 SM00962 SRP54-type protein, GTPase domain DJ92_932 SM00963 SRP54-type protein, helical bundle domain DJ92_934 SM00382 ATPases associated with a variety of cellular activities DJ92_934 SM00962 SRP54-type protein, GTPase domain DJ92_934 SM00963 SRP54-type protein, helical bundle domain DJ92_935 SM00968 SMC proteins Flexible Hinge Domain DJ92_936 SM00358 Double-stranded RNA binding motif DJ92_936 SM00535 Ribonuclease III family DJ92_938 SM00822 DJ92_938 DJ92_939 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. DJ92_942 SM00487 DEAD-like helicases superfamily DJ92_942 SM00490 helicase superfamily c-terminal domain DJ92_943 SM01120 DJ92_943 DJ92_943 SM01121 DJ92_943 DJ92_946 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain DJ92_949 SM00220 Serine/Threonine protein kinases, catalytic domain DJ92_949 SM00740 DJ92_949 DJ92_950 SM00331 Sigma factor PP2C-like phosphatases DJ92_950 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain DJ92_955 SM00487 DEAD-like helicases superfamily DJ92_955 SM00490 helicase superfamily c-terminal domain DJ92_957 SM01409 DJ92_957 DJ92_958 SM00072 Guanylate kinase homologues. DJ92_961 SM00831 Cation transporter/ATPase, N-terminus DJ92_974 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family DJ92_977 SM00851 MGS-like domain DJ92_977 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DJ92_977 SM01209 DJ92_977 DJ92_978 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain DJ92_983 SM00363 S4 RNA-binding domain DJ92_988 SM00363 S4 RNA-binding domain DJ92_997 SM00864 Tubulin/FtsZ family, GTPase domain DJ92_997 SM00865 Tubulin/FtsZ family, C-terminal domain DJ92_998 SM00842 Cell division protein FtsA