BG05_1009 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_1009 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1018 SM00530 Helix-turn-helix XRE-family like proteins BG05_1020 SM00849 Metallo-beta-lactamase superfamily BG05_1031 SM00493 BG05_1031 BG05_1034 SM00382 ATPases associated with a variety of cellular activities BG05_1034 SM00930 BG05_1034 BG05_1038 SM00382 ATPases associated with a variety of cellular activities BG05_1049 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_1054 SM00422 helix_turn_helix, mercury resistance BG05_1061 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_1065 SM00382 ATPases associated with a variety of cellular activities BG05_1074 SM00860 SMI1 / KNR4 family BG05_108 SM00387 Histidine kinase-like ATPases BG05_108 SM00388 His Kinase A (phosphoacceptor) domain BG05_1080 SM00382 ATPases associated with a variety of cellular activities BG05_1091 SM00871 Bacterial transcription activator, effector binding domain BG05_1110 SM00479 BG05_1110 BG05_1111 SM01298 BG05_1111 BG05_1118 SM00344 helix_turn_helix ASNC type BG05_1120 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_1155 SM00642 Alpha-amylase domain BG05_1162 SM00422 helix_turn_helix, mercury resistance BG05_1164 SM00357 Cold shock protein domain BG05_1172 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG05_1173 SM00448 cheY-homologous receiver domain BG05_1173 SM00862 Transcriptional regulatory protein, C terminal BG05_1174 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1174 SM00387 Histidine kinase-like ATPases BG05_1174 SM00388 His Kinase A (phosphoacceptor) domain BG05_1180 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_1180 SM00866 BG05_1180 BG05_1184 SM00382 ATPases associated with a variety of cellular activities BG05_1187 SM00387 Histidine kinase-like ATPases BG05_1188 SM00448 cheY-homologous receiver domain BG05_1188 SM00862 Transcriptional regulatory protein, C terminal BG05_1189 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_119 SM01007 Class II Aldolase and Adducin N-terminal domain BG05_1192 SM00382 ATPases associated with a variety of cellular activities BG05_1194 SM00342 helix_turn_helix, arabinose operon control protein BG05_1194 SM00871 Bacterial transcription activator, effector binding domain BG05_1195 SM00382 ATPases associated with a variety of cellular activities BG05_1200 SM00448 cheY-homologous receiver domain BG05_1200 SM00862 Transcriptional regulatory protein, C terminal BG05_1201 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1201 SM00387 Histidine kinase-like ATPases BG05_1201 SM00388 His Kinase A (phosphoacceptor) domain BG05_1208 SM00382 ATPases associated with a variety of cellular activities BG05_1213 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG05_1219 SM00448 cheY-homologous receiver domain BG05_1219 SM00862 Transcriptional regulatory protein, C terminal BG05_1220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1220 SM00387 Histidine kinase-like ATPases BG05_1220 SM00388 His Kinase A (phosphoacceptor) domain BG05_1222 SM00899 BG05_1222 BG05_1232 SM00894 Excalibur calcium-binding domain BG05_1236 SM01234 BG05_1236 BG05_1237 SM00947 Carbonic anhydrase BG05_1239 SM00422 helix_turn_helix, mercury resistance BG05_1253 SM00382 ATPases associated with a variety of cellular activities BG05_1261 SM01060 BG05_1261 BG05_1262 SM00387 Histidine kinase-like ATPases BG05_1262 SM00388 His Kinase A (phosphoacceptor) domain BG05_1263 SM00387 Histidine kinase-like ATPases BG05_1274 SM00852 Probable molybdopterin binding domain BG05_1278 SM00014 Acid phosphatase homologues BG05_1285 SM00382 ATPases associated with a variety of cellular activities BG05_1287 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_129 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG05_1290 SM00382 ATPases associated with a variety of cellular activities BG05_1307 SM00450 Rhodanese Homology Domain BG05_1312 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_1315 SM00852 Probable molybdopterin binding domain BG05_1322 SM01058 CarD-like/TRCF domain BG05_1327 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_133 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG05_133 SM00387 Histidine kinase-like ATPases BG05_133 SM00388 His Kinase A (phosphoacceptor) domain BG05_1331 SM00363 S4 RNA-binding domain BG05_1332 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_1335 SM00642 Alpha-amylase domain BG05_1339 SM00849 Metallo-beta-lactamase superfamily BG05_1347 SM00646 BG05_1347 BG05_1348 SM00382 ATPases associated with a variety of cellular activities BG05_1348 SM00843 BG05_1348 BG05_1351 SM00422 helix_turn_helix, mercury resistance BG05_1362 SM00354 helix_turn _helix lactose operon repressor BG05_1367 SM00248 ankyrin repeats BG05_1368 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1368 SM00387 Histidine kinase-like ATPases BG05_1368 SM00388 His Kinase A (phosphoacceptor) domain BG05_1369 SM00448 cheY-homologous receiver domain BG05_1369 SM00862 Transcriptional regulatory protein, C terminal BG05_1373 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_1377 SM01266 BG05_1377 BG05_1381 SM00363 S4 RNA-binding domain BG05_1384 SM00363 S4 RNA-binding domain BG05_1384 SM01390 BG05_1384 BG05_1391 SM00981 BG05_1391 BG05_1417 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG05_1417 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG05_1419 SM00530 Helix-turn-helix XRE-family like proteins BG05_1428 SM00849 Metallo-beta-lactamase superfamily BG05_143 SM00382 ATPases associated with a variety of cellular activities BG05_1430 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_1436 SM00481 DNA polymerase alpha chain like domain BG05_1437 SM00919 Malic enzyme, NAD binding domain BG05_1437 SM01274 BG05_1437 BG05_1438 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_1447 SM01329 BG05_1447 BG05_1452 SM00448 cheY-homologous receiver domain BG05_1452 SM00862 Transcriptional regulatory protein, C terminal BG05_1453 SM00091 PAS domain BG05_1453 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_1453 SM00387 Histidine kinase-like ATPases BG05_1453 SM00388 His Kinase A (phosphoacceptor) domain BG05_1454 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG05_1454 SM00474 3'-5' exonuclease BG05_1454 SM00475 5'-3' exonuclease BG05_1454 SM00482 DNA polymerase A domain BG05_1455 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BG05_1455 SM01232 BG05_1455 BG05_1458 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG05_146 SM00046 Diacylglycerol kinase catalytic domain (presumed) BG05_1462 SM00382 ATPases associated with a variety of cellular activities BG05_1464 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG05_147 SM00845 GatB domain BG05_1480 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG05_1482 SM00873 B3/4 domain BG05_1482 SM00874 tRNA synthetase B5 domain BG05_1482 SM00896 Ferredoxin-fold anticodon binding domain BG05_1489 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG05_1489 SM00481 DNA polymerase alpha chain like domain BG05_1489 SM00483 DNA polymerase X family BG05_1490 SM00463 Small MutS-related domain BG05_1490 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG05_1490 SM00534 ATPase domain of DNA mismatch repair MUTS family BG05_1492 SM00363 S4 RNA-binding domain BG05_1494 SM00725 NEAr Transporter domain BG05_1495 SM00725 NEAr Transporter domain BG05_1496 SM00725 NEAr Transporter domain BG05_1499 SM00382 ATPases associated with a variety of cellular activities BG05_1502 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG05_1505 SM00448 cheY-homologous receiver domain BG05_1505 SM00862 Transcriptional regulatory protein, C terminal BG05_1506 SM00387 Histidine kinase-like ATPases BG05_1506 SM00388 His Kinase A (phosphoacceptor) domain BG05_1507 SM00382 ATPases associated with a variety of cellular activities BG05_151 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_1521 SM00893 Electron transfer flavoprotein domain BG05_1522 SM00893 Electron transfer flavoprotein domain BG05_1524 SM00465 GIY-YIG type nucleases (URI domain) BG05_1534 SM00382 ATPases associated with a variety of cellular activities BG05_1539 SM00530 Helix-turn-helix XRE-family like proteins BG05_1543 SM00421 helix_turn_helix, Lux Regulon BG05_1546 SM00909 Sporulation and spore germination BG05_1557 SM00382 ATPases associated with a variety of cellular activities BG05_1557 SM00994 ClpX C4-type zinc finger BG05_1557 SM01086 C-terminal, D2-small domain, of ClpB protein BG05_1558 SM00382 ATPases associated with a variety of cellular activities BG05_1559 SM00382 ATPases associated with a variety of cellular activities BG05_1559 SM00464 Found in ATP-dependent protease La (LON) BG05_1562 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_1567 SM01004 Delta-aminolevulinic acid dehydratase BG05_1569 SM00257 Lysin motif BG05_157 SM00382 ATPases associated with a variety of cellular activities BG05_157 SM00930 BG05_157 BG05_1587 SM01317 BG05_1587 BG05_1589 SM00448 cheY-homologous receiver domain BG05_1589 SM00862 Transcriptional regulatory protein, C terminal BG05_1590 SM00387 Histidine kinase-like ATPases BG05_1591 SM00382 ATPases associated with a variety of cellular activities BG05_1601 SM00257 Lysin motif BG05_1606 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG05_1607 SM00382 ATPases associated with a variety of cellular activities BG05_1611 SM01323 BG05_1611 BG05_162 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG05_162 SM00292 breast cancer carboxy-terminal domain BG05_162 SM00532 Ligase N family BG05_1620 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_1620 SM00954 Region found in RelA / SpoT proteins BG05_1627 SM00382 ATPases associated with a variety of cellular activities BG05_1631 SM00028 Tetratricopeptide repeats BG05_1638 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG05_1640 SM00732 Likely ribonuclease with RNase H fold. BG05_1659 SM00382 ATPases associated with a variety of cellular activities BG05_166 SM00244 prohibitin homologues BG05_1664 SM00530 Helix-turn-helix XRE-family like proteins BG05_1673 SM00855 Phosphoglycerate mutase family BG05_1677 SM00098 Alkaline phosphatase homologues BG05_1679 SM00954 Region found in RelA / SpoT proteins BG05_168 SM01209 BG05_168 BG05_168 SM01210 BG05_168 BG05_1687 SM01103 BG05_1687 BG05_1689 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_169 SM00798 AICARFT/IMPCHase bienzyme BG05_169 SM00851 MGS-like domain BG05_1693 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BG05_1695 SM00849 Metallo-beta-lactamase superfamily BG05_1701 SM00838 Elongation factor G C-terminus BG05_1703 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_1707 SM00271 DnaJ molecular chaperone homology domain BG05_1710 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_1716 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_1723 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_1725 SM00400 zinc finger BG05_1725 SM00493 BG05_1725 BG05_1725 SM00766 DNA primase DnaG DnaB-binding BG05_1732 SM00487 DEAD-like helicases superfamily BG05_1732 SM00490 helicase superfamily c-terminal domain BG05_1733 SM00518 AP endonuclease family 2 BG05_1736 SM00382 ATPases associated with a variety of cellular activities BG05_174 SM01211 BG05_174 BG05_1749 SM00382 ATPases associated with a variety of cellular activities BG05_1757 SM00849 Metallo-beta-lactamase superfamily BG05_1759 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_1764 SM01018 B12 binding domain BG05_177 SM00998 Adenylosuccinate lyase C-terminus BG05_1775 SM00382 ATPases associated with a variety of cellular activities BG05_1782 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. BG05_1789 SM00487 DEAD-like helicases superfamily BG05_1789 SM00490 helicase superfamily c-terminal domain BG05_179 SM01001 AIR carboxylase BG05_1795 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_1796 SM00382 ATPases associated with a variety of cellular activities BG05_1805 SM00354 helix_turn _helix lactose operon repressor BG05_1807 SM00450 Rhodanese Homology Domain BG05_1813 SM00529 Helix-turn-helix diphteria tox regulatory element BG05_1820 SM00841 Elongation factor P, C-terminal BG05_1820 SM01185 BG05_1820 BG05_1824 SM00382 ATPases associated with a variety of cellular activities BG05_1833 SM00878 Biotin carboxylase C-terminal domain BG05_1840 SM00861 Transketolase, pyrimidine binding domain BG05_1841 SM00363 S4 RNA-binding domain BG05_1844 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_1845 SM00448 cheY-homologous receiver domain BG05_1854 SM00091 PAS domain BG05_1854 SM00382 ATPases associated with a variety of cellular activities BG05_1856 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG05_1860 SM00861 Transketolase, pyrimidine binding domain BG05_1867 SM00062 Bacterial periplasmic substrate-binding proteins BG05_1867 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG05_1869 SM00382 ATPases associated with a variety of cellular activities BG05_1878 SM00831 Cation transporter/ATPase, N-terminus BG05_1880 SM00849 Metallo-beta-lactamase superfamily BG05_1885 SM00849 Metallo-beta-lactamase superfamily BG05_1888 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG05_1896 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_190 SM00448 cheY-homologous receiver domain BG05_190 SM00862 Transcriptional regulatory protein, C terminal BG05_1906 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_1906 SM00876 Biotin and Thiamin Synthesis associated domain BG05_191 SM00387 Histidine kinase-like ATPases BG05_191 SM00388 His Kinase A (phosphoacceptor) domain BG05_1912 SM00704 CDGSH-type zinc finger. Function unknown. BG05_1916 SM00354 helix_turn _helix lactose operon repressor BG05_192 SM00382 ATPases associated with a variety of cellular activities BG05_1936 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG05_1940 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_1944 SM00382 ATPases associated with a variety of cellular activities BG05_1945 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_1946 SM00936 Penicillin-binding protein 5, C-terminal domain BG05_1948 SM00387 Histidine kinase-like ATPases BG05_195 SM01022 BG05_195 BG05_1966 SM00849 Metallo-beta-lactamase superfamily BG05_1969 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_1969 SM00866 BG05_1969 BG05_1971 SM01061 CAT RNA binding domain BG05_1978 SM00267 diguanylate cyclase BG05_1984 SM01007 Class II Aldolase and Adducin N-terminal domain BG05_200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_200 SM00387 Histidine kinase-like ATPases BG05_200 SM00388 His Kinase A (phosphoacceptor) domain BG05_2000 SM00382 ATPases associated with a variety of cellular activities BG05_2008 SM00382 ATPases associated with a variety of cellular activities BG05_2009 SM00642 Alpha-amylase domain BG05_201 SM00448 cheY-homologous receiver domain BG05_201 SM00862 Transcriptional regulatory protein, C terminal BG05_2010 SM00642 Alpha-amylase domain BG05_2014 SM00354 helix_turn _helix lactose operon repressor BG05_2017 SM00387 Histidine kinase-like ATPases BG05_2017 SM00388 His Kinase A (phosphoacceptor) domain BG05_2026 SM00267 diguanylate cyclase BG05_2034 SM00052 Putative diguanylate phosphodiesterase BG05_2047 SM00849 Metallo-beta-lactamase superfamily BG05_205 SM00883 Chaperonin 10 Kd subunit BG05_2053 SM00861 Transketolase, pyrimidine binding domain BG05_2069 SM00838 Elongation factor G C-terminus BG05_2074 SM00670 Large family of predicted nucleotide-binding domains BG05_2078 SM00878 Biotin carboxylase C-terminal domain BG05_208 SM00881 CoA binding domain BG05_209 SM00382 ATPases associated with a variety of cellular activities BG05_2090 SM00855 Phosphoglycerate mutase family BG05_2098 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_2102 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains BG05_2108 SM00740 BG05_2108 BG05_2109 SM00740 BG05_2109 BG05_2117 SM00842 Cell division protein FtsA BG05_2118 SM00864 Tubulin/FtsZ family, GTPase domain BG05_2118 SM00865 Tubulin/FtsZ family, C-terminal domain BG05_2127 SM00363 S4 RNA-binding domain BG05_2132 SM00363 S4 RNA-binding domain BG05_2137 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BG05_2138 SM00851 MGS-like domain BG05_2138 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BG05_2138 SM01209 BG05_2138 BG05_2141 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BG05_2150 SM00831 Cation transporter/ATPase, N-terminus BG05_2153 SM00072 Guanylate kinase homologues. BG05_2154 SM01409 BG05_2154 BG05_2156 SM00487 DEAD-like helicases superfamily BG05_2156 SM00490 helicase superfamily c-terminal domain BG05_2161 SM00331 Sigma factor PP2C-like phosphatases BG05_2161 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG05_2162 SM00220 Serine/Threonine protein kinases, catalytic domain BG05_2162 SM00740 BG05_2162 BG05_2165 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BG05_2168 SM01120 BG05_2168 BG05_2168 SM01121 BG05_2168 BG05_2169 SM00487 DEAD-like helicases superfamily BG05_2169 SM00490 helicase superfamily c-terminal domain BG05_2172 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BG05_2173 SM00822 BG05_2173 BG05_2175 SM00358 Double-stranded RNA binding motif BG05_2175 SM00535 Ribonuclease III family BG05_2176 SM00968 SMC proteins Flexible Hinge Domain BG05_2177 SM00382 ATPases associated with a variety of cellular activities BG05_2177 SM00962 SRP54-type protein, GTPase domain BG05_2177 SM00963 SRP54-type protein, helical bundle domain BG05_2179 SM00382 ATPases associated with a variety of cellular activities BG05_2179 SM00962 SRP54-type protein, GTPase domain BG05_2179 SM00963 SRP54-type protein, helical bundle domain BG05_2189 SM00881 CoA binding domain BG05_2191 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG05_2191 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG05_2191 SM00493 BG05_2191 BG05_2195 SM00382 ATPases associated with a variety of cellular activities BG05_2195 SM01086 C-terminal, D2-small domain, of ClpB protein BG05_2204 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_2206 SM00479 BG05_2206 BG05_2206 SM00481 DNA polymerase alpha chain like domain BG05_2208 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_2208 SM00322 K homology RNA-binding domain BG05_2215 SM00904 Riboflavin kinase BG05_2216 SM01387 BG05_2216 BG05_2217 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_2217 SM00322 K homology RNA-binding domain BG05_2223 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG05_2225 SM01130 BG05_2225 BG05_2226 SM00849 Metallo-beta-lactamase superfamily BG05_2229 SM00382 ATPases associated with a variety of cellular activities BG05_2229 SM00843 BG05_2229 BG05_2231 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_2231 SM00866 BG05_2231 BG05_2233 SM00382 ATPases associated with a variety of cellular activities BG05_2243 SM00852 Probable molybdopterin binding domain BG05_2244 SM00382 ATPases associated with a variety of cellular activities BG05_2245 SM00322 K homology RNA-binding domain BG05_2245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_2251 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_2254 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG05_2254 SM00534 ATPase domain of DNA mismatch repair MUTS family BG05_2255 SM00853 MutL C terminal dimerisation domain BG05_2255 SM01340 BG05_2255 BG05_2261 SM00257 Lysin motif BG05_2262 SM00148 Phospholipase C, catalytic domain (part); domain X BG05_2264 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_2264 SM00866 BG05_2264 BG05_2268 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_2278 SM00052 Putative diguanylate phosphodiesterase BG05_2278 SM00091 PAS domain BG05_2278 SM00267 diguanylate cyclase BG05_2280 SM00855 Phosphoglycerate mutase family BG05_2284 SM00478 endonuclease III BG05_2286 SM00342 helix_turn_helix, arabinose operon control protein BG05_2291 SM00382 ATPases associated with a variety of cellular activities BG05_2294 SM00421 helix_turn_helix, Lux Regulon BG05_2295 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2296 SM00855 Phosphoglycerate mutase family BG05_2308 SM00636 BG05_2308 BG05_2314 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_2314 SM01134 BG05_2314 BG05_2317 SM00287 Bacterial SH3 domain homologues BG05_232 SM00731 SprT homologues. BG05_2323 SM00382 ATPases associated with a variety of cellular activities BG05_2328 SM00422 helix_turn_helix, mercury resistance BG05_2329 SM01230 BG05_2329 BG05_233 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_233 SM00732 Likely ribonuclease with RNase H fold. BG05_2334 SM00857 Resolvase, N terminal domain BG05_2337 SM00062 Bacterial periplasmic substrate-binding proteins BG05_2338 SM00382 ATPases associated with a variety of cellular activities BG05_2341 SM00861 Transketolase, pyrimidine binding domain BG05_2344 SM00382 ATPases associated with a variety of cellular activities BG05_2345 SM00382 ATPases associated with a variety of cellular activities BG05_2346 SM00287 Bacterial SH3 domain homologues BG05_2346 SM00641 Glycosyl hydrolases family 25 BG05_2349 SM00644 BG05_2349 BG05_2358 SM00382 ATPases associated with a variety of cellular activities BG05_236 SM01005 Alanine racemase, C-terminal domain BG05_2375 SM01058 CarD-like/TRCF domain BG05_2376 SM00829 Enoylreductase BG05_2382 SM00091 PAS domain BG05_2382 SM00387 Histidine kinase-like ATPases BG05_2382 SM00388 His Kinase A (phosphoacceptor) domain BG05_2385 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG05_2386 SM00644 BG05_2386 BG05_2386 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. BG05_2391 SM00988 UreE urease accessory protein, N-terminal domain BG05_2400 SM00530 Helix-turn-helix XRE-family like proteins BG05_2407 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG05_241 SM00487 DEAD-like helicases superfamily BG05_241 SM00490 helicase superfamily c-terminal domain BG05_2416 SM00382 ATPases associated with a variety of cellular activities BG05_2420 SM00479 BG05_2420 BG05_2423 SM00257 Lysin motif BG05_2423 SM00636 BG05_2423 BG05_2426 SM01207 BG05_2426 BG05_2429 SM00448 cheY-homologous receiver domain BG05_2429 SM00862 Transcriptional regulatory protein, C terminal BG05_2430 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_2431 SM00881 CoA binding domain BG05_2432 SM00387 Histidine kinase-like ATPases BG05_2432 SM00433 TopoisomeraseII BG05_2433 SM00434 DNA Topoisomerase IV BG05_2436 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_2438 SM00382 ATPases associated with a variety of cellular activities BG05_2467 SM01022 BG05_2467 BG05_2472 SM00357 Cold shock protein domain BG05_2473 SM00479 BG05_2473 BG05_2479 SM00382 ATPases associated with a variety of cellular activities BG05_2480 SM00062 Bacterial periplasmic substrate-binding proteins BG05_2480 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG05_2484 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG05_2491 SM00028 Tetratricopeptide repeats BG05_2495 SM00829 Enoylreductase BG05_2496 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_25 SM00984 UDP binding domain BG05_2510 SM00422 helix_turn_helix, mercury resistance BG05_2510 SM00871 Bacterial transcription activator, effector binding domain BG05_2515 SM00642 Alpha-amylase domain BG05_2516 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BG05_2516 SM00534 ATPase domain of DNA mismatch repair MUTS family BG05_2518 SM00855 Phosphoglycerate mutase family BG05_2520 SM00829 Enoylreductase BG05_2535 SM00422 helix_turn_helix, mercury resistance BG05_2547 SM00829 Enoylreductase BG05_255 SM00382 ATPases associated with a variety of cellular activities BG05_2551 SM00849 Metallo-beta-lactamase superfamily BG05_256 SM00382 ATPases associated with a variety of cellular activities BG05_2568 SM00382 ATPases associated with a variety of cellular activities BG05_2579 SM00448 cheY-homologous receiver domain BG05_2579 SM00862 Transcriptional regulatory protein, C terminal BG05_2580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2580 SM00387 Histidine kinase-like ATPases BG05_2580 SM00388 His Kinase A (phosphoacceptor) domain BG05_2583 SM00421 helix_turn_helix, Lux Regulon BG05_2583 SM00448 cheY-homologous receiver domain BG05_2590 SM00387 Histidine kinase-like ATPases BG05_2590 SM00388 His Kinase A (phosphoacceptor) domain BG05_2601 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2602 SM00248 ankyrin repeats BG05_2614 SM00849 Metallo-beta-lactamase superfamily BG05_2619 SM00914 BG05_2619 BG05_2624 SM01350 BG05_2624 BG05_263 SM00382 ATPases associated with a variety of cellular activities BG05_2638 SM00422 helix_turn_helix, mercury resistance BG05_2639 SM01091 Transporter associated domain BG05_264 SM00421 helix_turn_helix, Lux Regulon BG05_264 SM00448 cheY-homologous receiver domain BG05_265 SM00387 Histidine kinase-like ATPases BG05_266 SM00382 ATPases associated with a variety of cellular activities BG05_2660 SM01266 BG05_2660 BG05_2675 SM00530 Helix-turn-helix XRE-family like proteins BG05_2678 SM00382 ATPases associated with a variety of cellular activities BG05_2685 SM00098 Alkaline phosphatase homologues BG05_2692 SM00530 Helix-turn-helix XRE-family like proteins BG05_2700 SM00382 ATPases associated with a variety of cellular activities BG05_2723 SM00422 helix_turn_helix, mercury resistance BG05_2727 SM00155 Phospholipase D. Active site motifs. BG05_2730 SM00421 helix_turn_helix, Lux Regulon BG05_2730 SM00448 cheY-homologous receiver domain BG05_2731 SM00387 Histidine kinase-like ATPases BG05_2736 SM00382 ATPases associated with a variety of cellular activities BG05_2737 SM01260 BG05_2737 BG05_2739 SM00382 ATPases associated with a variety of cellular activities BG05_2742 SM00382 ATPases associated with a variety of cellular activities BG05_2744 SM00448 cheY-homologous receiver domain BG05_2744 SM00862 Transcriptional regulatory protein, C terminal BG05_2745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2745 SM00387 Histidine kinase-like ATPases BG05_2745 SM00388 His Kinase A (phosphoacceptor) domain BG05_2750 SM00857 Resolvase, N terminal domain BG05_2757 SM01058 CarD-like/TRCF domain BG05_2762 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2768 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_277 SM00354 helix_turn _helix lactose operon repressor BG05_2786 SM00248 ankyrin repeats BG05_279 SM00563 Phosphate acyltransferases BG05_2790 SM00860 SMI1 / KNR4 family BG05_2793 SM00860 SMI1 / KNR4 family BG05_2804 SM00248 ankyrin repeats BG05_2824 SM00028 Tetratricopeptide repeats BG05_2829 SM00448 cheY-homologous receiver domain BG05_2829 SM00862 Transcriptional regulatory protein, C terminal BG05_2830 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2830 SM00387 Histidine kinase-like ATPases BG05_2830 SM00388 His Kinase A (phosphoacceptor) domain BG05_2833 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2835 SM00382 ATPases associated with a variety of cellular activities BG05_2850 SM00530 Helix-turn-helix XRE-family like proteins BG05_2859 SM00421 helix_turn_helix, Lux Regulon BG05_2859 SM00448 cheY-homologous receiver domain BG05_2864 SM00342 helix_turn_helix, arabinose operon control protein BG05_2869 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG05_2869 SM00091 PAS domain BG05_2869 SM00387 Histidine kinase-like ATPases BG05_2869 SM00388 His Kinase A (phosphoacceptor) domain BG05_2871 SM00448 cheY-homologous receiver domain BG05_2871 SM00862 Transcriptional regulatory protein, C terminal BG05_2872 SM00387 Histidine kinase-like ATPases BG05_2872 SM00388 His Kinase A (phosphoacceptor) domain BG05_2885 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2885 SM00387 Histidine kinase-like ATPases BG05_2885 SM00388 His Kinase A (phosphoacceptor) domain BG05_2886 SM00448 cheY-homologous receiver domain BG05_2886 SM00862 Transcriptional regulatory protein, C terminal BG05_2894 SM00344 helix_turn_helix ASNC type BG05_2899 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2902 SM00226 Low molecular weight phosphatase family BG05_2908 SM00448 cheY-homologous receiver domain BG05_2908 SM00862 Transcriptional regulatory protein, C terminal BG05_2909 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2909 SM00387 Histidine kinase-like ATPases BG05_2909 SM00388 His Kinase A (phosphoacceptor) domain BG05_2910 SM00646 BG05_2910 BG05_2919 SM00448 cheY-homologous receiver domain BG05_2919 SM00862 Transcriptional regulatory protein, C terminal BG05_2920 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_2920 SM00387 Histidine kinase-like ATPases BG05_2920 SM00388 His Kinase A (phosphoacceptor) domain BG05_2923 SM00382 ATPases associated with a variety of cellular activities BG05_2932 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_2940 SM00346 helix_turn_helix isocitrate lyase regulation BG05_2941 SM00796 Allophanate hydrolase subunit 1 BG05_2942 SM00797 Allophanate hydrolase subunit 2 BG05_2967 SM00448 cheY-homologous receiver domain BG05_2967 SM00862 Transcriptional regulatory protein, C terminal BG05_2968 SM00387 Histidine kinase-like ATPases BG05_2968 SM00388 His Kinase A (phosphoacceptor) domain BG05_297 SM00342 helix_turn_helix, arabinose operon control protein BG05_2977 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_2982 SM00342 helix_turn_helix, arabinose operon control protein BG05_2982 SM00871 Bacterial transcription activator, effector binding domain BG05_2986 SM00860 SMI1 / KNR4 family BG05_2988 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_2989 SM00382 ATPases associated with a variety of cellular activities BG05_2994 SM00889 Elongation factor G, domain IV BG05_2995 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_3 SM00382 ATPases associated with a variety of cellular activities BG05_300 SM00382 ATPases associated with a variety of cellular activities BG05_3002 SM01060 BG05_3002 BG05_301 SM00382 ATPases associated with a variety of cellular activities BG05_3017 SM00530 Helix-turn-helix XRE-family like proteins BG05_3019 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_3019 SM01134 BG05_3019 BG05_3025 SM00382 ATPases associated with a variety of cellular activities BG05_3027 SM00014 Acid phosphatase homologues BG05_3032 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BG05_3037 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_3045 SM01133 BG05_3045 BG05_3049 SM00382 ATPases associated with a variety of cellular activities BG05_3061 SM00287 Bacterial SH3 domain homologues BG05_3068 SM00830 Chorismate mutase type II BG05_3078 SM00382 ATPases associated with a variety of cellular activities BG05_3099 SM00028 Tetratricopeptide repeats BG05_311 SM00829 Enoylreductase BG05_3115 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_3116 SM00382 ATPases associated with a variety of cellular activities BG05_313 SM00382 ATPases associated with a variety of cellular activities BG05_313 SM00930 BG05_313 BG05_3152 SM00028 Tetratricopeptide repeats BG05_3159 SM00448 cheY-homologous receiver domain BG05_3159 SM00862 Transcriptional regulatory protein, C terminal BG05_3160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_3160 SM00387 Histidine kinase-like ATPases BG05_3160 SM00388 His Kinase A (phosphoacceptor) domain BG05_3161 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain BG05_3168 SM00248 ankyrin repeats BG05_3174 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BG05_3187 SM00091 PAS domain BG05_3187 SM00382 ATPases associated with a variety of cellular activities BG05_3191 SM01130 BG05_3191 BG05_3196 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_3200 SM01131 BG05_3200 BG05_3207 SM00341 Helicase and RNase D C-terminal BG05_3207 SM00487 DEAD-like helicases superfamily BG05_3207 SM00490 helicase superfamily c-terminal domain BG05_3207 SM00956 BG05_3207 BG05_3228 SM00060 Fibronectin type 3 domain BG05_3235 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_3235 SM00382 ATPases associated with a variety of cellular activities BG05_3244 SM00342 helix_turn_helix, arabinose operon control protein BG05_3248 SM00861 Transketolase, pyrimidine binding domain BG05_3258 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_3258 SM01134 BG05_3258 BG05_3262 SM00382 ATPases associated with a variety of cellular activities BG05_3282 SM00829 Enoylreductase BG05_3290 SM00448 cheY-homologous receiver domain BG05_3290 SM00862 Transcriptional regulatory protein, C terminal BG05_3291 SM00387 Histidine kinase-like ATPases BG05_3294 SM00382 ATPases associated with a variety of cellular activities BG05_3296 SM00382 ATPases associated with a variety of cellular activities BG05_3302 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_3303 SM01209 BG05_3303 BG05_3307 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_3321 SM00091 PAS domain BG05_3321 SM00387 Histidine kinase-like ATPases BG05_3321 SM00388 His Kinase A (phosphoacceptor) domain BG05_3327 SM00382 ATPases associated with a variety of cellular activities BG05_3330 SM00387 Histidine kinase-like ATPases BG05_3330 SM00388 His Kinase A (phosphoacceptor) domain BG05_3334 SM00448 cheY-homologous receiver domain BG05_3334 SM00862 Transcriptional regulatory protein, C terminal BG05_3335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_3335 SM00387 Histidine kinase-like ATPases BG05_3335 SM00388 His Kinase A (phosphoacceptor) domain BG05_3336 SM00829 Enoylreductase BG05_3337 SM00014 Acid phosphatase homologues BG05_3338 SM00740 BG05_3338 BG05_3345 SM00422 helix_turn_helix, mercury resistance BG05_3353 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_3365 SM00480 DNA polymerase III beta subunit BG05_3385 SM00465 GIY-YIG type nucleases (URI domain) BG05_3391 SM00382 ATPases associated with a variety of cellular activities BG05_3392 SM00382 ATPases associated with a variety of cellular activities BG05_34 SM00530 Helix-turn-helix XRE-family like proteins BG05_340 SM01251 BG05_340 BG05_3400 SM00448 cheY-homologous receiver domain BG05_3400 SM00862 Transcriptional regulatory protein, C terminal BG05_3401 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_3401 SM00387 Histidine kinase-like ATPases BG05_3401 SM00388 His Kinase A (phosphoacceptor) domain BG05_3404 SM00382 ATPases associated with a variety of cellular activities BG05_3413 SM00642 Alpha-amylase domain BG05_3422 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_343 SM00646 BG05_343 BG05_3431 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_3434 SM00342 helix_turn_helix, arabinose operon control protein BG05_3445 SM00871 Bacterial transcription activator, effector binding domain BG05_3449 SM00382 ATPases associated with a variety of cellular activities BG05_3457 SM00448 cheY-homologous receiver domain BG05_3457 SM00862 Transcriptional regulatory protein, C terminal BG05_3458 SM00387 Histidine kinase-like ATPases BG05_3458 SM00388 His Kinase A (phosphoacceptor) domain BG05_3474 SM00878 Biotin carboxylase C-terminal domain BG05_3479 SM00382 ATPases associated with a variety of cellular activities BG05_3483 SM00148 Phospholipase C, catalytic domain (part); domain X BG05_3484 SM00060 Fibronectin type 3 domain BG05_349 SM00382 ATPases associated with a variety of cellular activities BG05_3491 SM00831 Cation transporter/ATPase, N-terminus BG05_3494 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_3494 SM00924 MgtE intracellular N domain BG05_3495 SM00287 Bacterial SH3 domain homologues BG05_3499 SM00458 Ricin-type beta-trefoil BG05_350 SM00382 ATPases associated with a variety of cellular activities BG05_3506 SM00421 helix_turn_helix, Lux Regulon BG05_3506 SM00448 cheY-homologous receiver domain BG05_3514 SM00382 ATPases associated with a variety of cellular activities BG05_3515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_3515 SM00387 Histidine kinase-like ATPases BG05_3515 SM00388 His Kinase A (phosphoacceptor) domain BG05_3516 SM00448 cheY-homologous receiver domain BG05_3516 SM00862 Transcriptional regulatory protein, C terminal BG05_3519 SM00382 ATPases associated with a variety of cellular activities BG05_352 SM00662 RNA polymerases D BG05_3521 SM00387 Histidine kinase-like ATPases BG05_3521 SM00388 His Kinase A (phosphoacceptor) domain BG05_3522 SM00448 cheY-homologous receiver domain BG05_3522 SM00862 Transcriptional regulatory protein, C terminal BG05_3526 SM00450 Rhodanese Homology Domain BG05_3526 SM00849 Metallo-beta-lactamase superfamily BG05_3528 SM01276 BG05_3528 BG05_3536 SM00382 ATPases associated with a variety of cellular activities BG05_3537 SM00387 Histidine kinase-like ATPases BG05_3538 SM00448 cheY-homologous receiver domain BG05_3538 SM00862 Transcriptional regulatory protein, C terminal BG05_3544 SM00936 Penicillin-binding protein 5, C-terminal domain BG05_3545 SM00387 Histidine kinase-like ATPases BG05_3545 SM00388 His Kinase A (phosphoacceptor) domain BG05_3546 SM00448 cheY-homologous receiver domain BG05_3546 SM00862 Transcriptional regulatory protein, C terminal BG05_3551 SM00382 ATPases associated with a variety of cellular activities BG05_3559 SM00855 Phosphoglycerate mutase family BG05_356 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_3560 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_3564 SM00382 ATPases associated with a variety of cellular activities BG05_3568 SM00487 DEAD-like helicases superfamily BG05_3568 SM00490 helicase superfamily c-terminal domain BG05_3577 SM01207 BG05_3577 BG05_3587 SM00770 Zinc dependent phospholipase C (alpha toxin) BG05_3598 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_3600 SM00835 Cupin BG05_3606 SM00530 Helix-turn-helix XRE-family like proteins BG05_3614 SM00382 ATPases associated with a variety of cellular activities BG05_3615 SM00382 ATPases associated with a variety of cellular activities BG05_3624 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG05_3629 SM00357 Cold shock protein domain BG05_3636 SM00530 Helix-turn-helix XRE-family like proteins BG05_3643 SM01059 Chloramphenicol acetyltransferase BG05_3647 SM00849 Metallo-beta-lactamase superfamily BG05_3649 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_3653 SM00100 Cyclic nucleotide-monophosphate binding domain BG05_3658 SM00849 Metallo-beta-lactamase superfamily BG05_3659 SM01091 Transporter associated domain BG05_3660 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_3670 SM00382 ATPases associated with a variety of cellular activities BG05_3672 SM00530 Helix-turn-helix XRE-family like proteins BG05_3673 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BG05_3674 SM00363 S4 RNA-binding domain BG05_368 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BG05_3683 SM00411 bacterial (prokaryotic) histone like domain BG05_3687 SM00923 MbtH-like protein BG05_3688 SM00823 Phosphopantetheine attachment site BG05_3688 SM00824 Thioesterase BG05_369 SM01374 BG05_369 BG05_3695 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_373 SM00322 K homology RNA-binding domain BG05_3733 SM00014 Acid phosphatase homologues BG05_3736 SM00219 Tyrosine kinase, catalytic domain BG05_3744 SM00382 ATPases associated with a variety of cellular activities BG05_3747 SM00882 Coenzyme A transferase BG05_3748 SM00882 Coenzyme A transferase BG05_3751 SM00387 Histidine kinase-like ATPases BG05_3751 SM00388 His Kinase A (phosphoacceptor) domain BG05_3754 SM01091 Transporter associated domain BG05_376 SM01382 BG05_376 BG05_376 SM01383 BG05_376 BG05_3762 SM00382 ATPases associated with a variety of cellular activities BG05_3766 SM01350 BG05_3766 BG05_3771 SM00829 Enoylreductase BG05_3773 SM00421 helix_turn_helix, Lux Regulon BG05_3773 SM00448 cheY-homologous receiver domain BG05_3774 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG05_3781 SM00287 Bacterial SH3 domain homologues BG05_3781 SM00646 BG05_3781 BG05_3793 SM00563 Phosphate acyltransferases BG05_38 SM00382 ATPases associated with a variety of cellular activities BG05_380 SM01403 BG05_380 BG05_3804 SM00382 ATPases associated with a variety of cellular activities BG05_382 SM00838 Elongation factor G C-terminus BG05_382 SM00889 Elongation factor G, domain IV BG05_3823 SM00028 Tetratricopeptide repeats BG05_3827 SM00836 DALR anticodon binding domain BG05_3827 SM01016 Arginyl tRNA synthetase N terminal dom BG05_3831 SM00567 E-Z type HEAT repeats BG05_3831 SM00932 Scaffold protein Nfu/NifU N terminal BG05_3835 SM00382 ATPases associated with a variety of cellular activities BG05_3836 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_3855 SM00894 Excalibur calcium-binding domain BG05_3859 SM00460 Transglutaminase/protease-like homologues BG05_386 SM00663 RNA polymerase I subunit A N-terminus BG05_3862 SM00849 Metallo-beta-lactamase superfamily BG05_3867 SM00829 Enoylreductase BG05_3869 SM00487 DEAD-like helicases superfamily BG05_3869 SM00490 helicase superfamily c-terminal domain BG05_3907 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_3912 SM01005 Alanine racemase, C-terminal domain BG05_3915 SM00855 Phosphoglycerate mutase family BG05_3917 SM00244 prohibitin homologues BG05_392 SM00649 Ribosomal protein L11/L12 BG05_393 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BG05_3933 SM01091 Transporter associated domain BG05_3935 SM00859 Semialdehyde dehydrogenase, NAD binding domain BG05_3938 SM00155 Phospholipase D. Active site motifs. BG05_3948 SM00855 Phosphoglycerate mutase family BG05_395 SM00421 helix_turn_helix, Lux Regulon BG05_3955 SM00387 Histidine kinase-like ATPases BG05_3956 SM00448 cheY-homologous receiver domain BG05_3956 SM00862 Transcriptional regulatory protein, C terminal BG05_3958 SM00382 ATPases associated with a variety of cellular activities BG05_3966 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG05_397 SM00967 RNA 2'-O ribose methyltransferase substrate binding BG05_3978 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_3978 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_398 SM00535 Ribonuclease III family BG05_3985 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_3987 SM00966 SpoVT / AbrB like domain BG05_399 SM00840 BG05_399 BG05_3991 SM00460 Transglutaminase/protease-like homologues BG05_3996 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_4024 SM00387 Histidine kinase-like ATPases BG05_4024 SM00388 His Kinase A (phosphoacceptor) domain BG05_4025 SM00448 cheY-homologous receiver domain BG05_4025 SM00862 Transcriptional regulatory protein, C terminal BG05_4026 SM00382 ATPases associated with a variety of cellular activities BG05_4028 SM00287 Bacterial SH3 domain homologues BG05_4037 SM00382 ATPases associated with a variety of cellular activities BG05_4038 SM00382 ATPases associated with a variety of cellular activities BG05_404 SM00670 Large family of predicted nucleotide-binding domains BG05_4043 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4050 SM00382 ATPases associated with a variety of cellular activities BG05_4051 SM00382 ATPases associated with a variety of cellular activities BG05_4059 SM00833 Cobalamin synthesis protein cobW C-terminal domain BG05_406 SM00382 ATPases associated with a variety of cellular activities BG05_407 SM00382 ATPases associated with a variety of cellular activities BG05_407 SM01086 C-terminal, D2-small domain, of ClpB protein BG05_4080 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG05_4080 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG05_4080 SM00493 BG05_4080 BG05_4083 SM01011 Aminopeptidase P, N-terminal domain BG05_4093 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BG05_4095 SM01133 BG05_4095 BG05_4112 SM00450 Rhodanese Homology Domain BG05_4125 SM00854 Bacterial capsule synthesis protein PGA_cap BG05_4155 SM00047 Lysozyme subfamily 2 BG05_4156 SM00646 BG05_4156 BG05_4166 SM00487 DEAD-like helicases superfamily BG05_4166 SM00490 helicase superfamily c-terminal domain BG05_4168 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4169 SM00448 cheY-homologous receiver domain BG05_4170 SM00387 Histidine kinase-like ATPases BG05_4171 SM00919 Malic enzyme, NAD binding domain BG05_4171 SM01274 BG05_4171 BG05_4178 SM00860 SMI1 / KNR4 family BG05_4182 SM00155 Phospholipase D. Active site motifs. BG05_4185 SM00382 ATPases associated with a variety of cellular activities BG05_4187 SM00421 helix_turn_helix, Lux Regulon BG05_4187 SM00448 cheY-homologous receiver domain BG05_4194 SM00530 Helix-turn-helix XRE-family like proteins BG05_42 SM00478 endonuclease III BG05_4212 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_4212 SM00895 BG05_4212 BG05_4220 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4224 SM00855 Phosphoglycerate mutase family BG05_4226 SM00835 Cupin BG05_4230 SM00849 Metallo-beta-lactamase superfamily BG05_4230 SM01027 Beta-Casp domain BG05_4233 SM00382 ATPases associated with a variety of cellular activities BG05_4237 SM00530 Helix-turn-helix XRE-family like proteins BG05_4248 SM00382 ATPases associated with a variety of cellular activities BG05_4248 SM00962 SRP54-type protein, GTPase domain BG05_4264 SM00260 Two component signalling adaptor domain BG05_4264 SM00448 cheY-homologous receiver domain BG05_4281 SM00422 helix_turn_helix, mercury resistance BG05_4281 SM00871 Bacterial transcription activator, effector binding domain BG05_4291 SM00357 Cold shock protein domain BG05_430 SM00530 Helix-turn-helix XRE-family like proteins BG05_4312 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BG05_4312 SM00475 5'-3' exonuclease BG05_4318 SM00450 Rhodanese Homology Domain BG05_432 SM00905 Dihydroneopterin aldolase BG05_4329 SM00491 BG05_4329 BG05_4331 SM00981 BG05_4331 BG05_4342 SM00060 Fibronectin type 3 domain BG05_4344 SM00478 endonuclease III BG05_4349 SM00479 BG05_4349 BG05_4349 SM00487 DEAD-like helicases superfamily BG05_4349 SM00491 BG05_4349 BG05_4357 SM00851 MGS-like domain BG05_4361 SM00986 Uracil DNA glycosylase superfamily BG05_4361 SM00987 UreE urease accessory protein, C-terminal domain BG05_4370 SM00914 BG05_4370 BG05_4371 SM00028 Tetratricopeptide repeats BG05_4376 SM00562 BG05_4376 BG05_4381 SM00411 bacterial (prokaryotic) histone like domain BG05_4394 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_4396 SM00870 BG05_4396 BG05_440 SM00382 ATPases associated with a variety of cellular activities BG05_4400 SM00644 BG05_4400 BG05_4403 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG05_4405 SM00422 helix_turn_helix, mercury resistance BG05_4407 SM00257 Lysin motif BG05_4409 SM00487 DEAD-like helicases superfamily BG05_4409 SM00490 helicase superfamily c-terminal domain BG05_4414 SM00257 Lysin motif BG05_4416 SM00091 PAS domain BG05_4416 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_4416 SM00387 Histidine kinase-like ATPases BG05_4416 SM00388 His Kinase A (phosphoacceptor) domain BG05_4417 SM00448 cheY-homologous receiver domain BG05_4417 SM00862 Transcriptional regulatory protein, C terminal BG05_442 SM00977 TilS substrate C-terminal domain BG05_4421 SM00363 S4 RNA-binding domain BG05_443 SM00331 Sigma factor PP2C-like phosphatases BG05_443 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BG05_4431 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_4431 SM00387 Histidine kinase-like ATPases BG05_4431 SM00388 His Kinase A (phosphoacceptor) domain BG05_4435 SM00091 PAS domain BG05_4435 SM00387 Histidine kinase-like ATPases BG05_4435 SM00388 His Kinase A (phosphoacceptor) domain BG05_4453 SM00421 helix_turn_helix, Lux Regulon BG05_4453 SM00448 cheY-homologous receiver domain BG05_4454 SM00387 Histidine kinase-like ATPases BG05_446 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_4490 SM01329 BG05_4490 BG05_4491 SM00917 LeuA allosteric (dimerisation) domain BG05_450 SM00363 S4 RNA-binding domain BG05_4504 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4529 SM00344 helix_turn_helix ASNC type BG05_453 SM00966 SpoVT / AbrB like domain BG05_4533 SM00382 ATPases associated with a variety of cellular activities BG05_4535 SM00382 ATPases associated with a variety of cellular activities BG05_4536 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_4539 SM00091 PAS domain BG05_4539 SM00382 ATPases associated with a variety of cellular activities BG05_454 SM00487 DEAD-like helicases superfamily BG05_454 SM00490 helicase superfamily c-terminal domain BG05_454 SM00982 BG05_454 BG05_454 SM01058 CarD-like/TRCF domain BG05_4542 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BG05_4558 SM00387 Histidine kinase-like ATPases BG05_4558 SM00388 His Kinase A (phosphoacceptor) domain BG05_4562 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4563 SM00387 Histidine kinase-like ATPases BG05_4563 SM00388 His Kinase A (phosphoacceptor) domain BG05_4567 SM01007 Class II Aldolase and Adducin N-terminal domain BG05_4568 SM00365 Leucine-rich repeat, SDS22-like subfamily BG05_4568 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG05_4568 SM00725 NEAr Transporter domain BG05_457 SM01400 BG05_457 BG05_4570 SM00420 helix_turn_helix, Deoxyribose operon repressor BG05_4570 SM01134 BG05_4570 BG05_4575 SM00382 ATPases associated with a variety of cellular activities BG05_4582 SM00822 BG05_4582 BG05_4596 SM00422 helix_turn_helix, mercury resistance BG05_4602 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_4602 SM00895 BG05_4602 BG05_4603 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_4603 SM00387 Histidine kinase-like ATPases BG05_4603 SM00388 His Kinase A (phosphoacceptor) domain BG05_4604 SM00448 cheY-homologous receiver domain BG05_4604 SM00862 Transcriptional regulatory protein, C terminal BG05_4614 SM00014 Acid phosphatase homologues BG05_4618 SM00382 ATPases associated with a variety of cellular activities BG05_4622 SM00530 Helix-turn-helix XRE-family like proteins BG05_4637 SM00530 Helix-turn-helix XRE-family like proteins BG05_4638 SM00861 Transketolase, pyrimidine binding domain BG05_4647 SM01324 BG05_4647 BG05_466 SM00650 Ribosomal RNA adenine dimethylases BG05_4663 SM00635 Bacterial Ig-like domain 2 BG05_4665 SM00100 Cyclic nucleotide-monophosphate binding domain BG05_467 SM00493 BG05_467 BG05_4695 SM00954 Region found in RelA / SpoT proteins BG05_4697 SM01118 BG05_4697 BG05_470 SM00966 SpoVT / AbrB like domain BG05_4703 SM00155 Phospholipase D. Active site motifs. BG05_4710 SM00382 ATPases associated with a variety of cellular activities BG05_4711 SM00382 ATPases associated with a variety of cellular activities BG05_472 SM00465 GIY-YIG type nucleases (URI domain) BG05_4720 SM00825 Beta-ketoacyl synthase BG05_4726 SM00382 ATPases associated with a variety of cellular activities BG05_4726 SM01086 C-terminal, D2-small domain, of ClpB protein BG05_4734 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_4736 SM00642 Alpha-amylase domain BG05_4738 SM01060 BG05_4738 BG05_4762 SM00357 Cold shock protein domain BG05_4775 SM00448 cheY-homologous receiver domain BG05_4775 SM00862 Transcriptional regulatory protein, C terminal BG05_4776 SM00387 Histidine kinase-like ATPases BG05_4776 SM00388 His Kinase A (phosphoacceptor) domain BG05_4777 SM00342 helix_turn_helix, arabinose operon control protein BG05_4777 SM00871 Bacterial transcription activator, effector binding domain BG05_4783 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_4787 SM00382 ATPases associated with a variety of cellular activities BG05_4791 SM00725 NEAr Transporter domain BG05_4796 SM00849 Metallo-beta-lactamase superfamily BG05_4798 SM00354 helix_turn _helix lactose operon repressor BG05_4835 SM00382 ATPases associated with a variety of cellular activities BG05_4838 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4851 SM00530 Helix-turn-helix XRE-family like proteins BG05_4856 SM00028 Tetratricopeptide repeats BG05_4859 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_4867 SM00421 helix_turn_helix, Lux Regulon BG05_4867 SM00448 cheY-homologous receiver domain BG05_4868 SM00387 Histidine kinase-like ATPases BG05_4869 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_4869 SM00895 BG05_4869 BG05_4874 SM01321 BG05_4874 BG05_488 SM00493 BG05_488 BG05_4880 SM00387 Histidine kinase-like ATPases BG05_4880 SM00388 His Kinase A (phosphoacceptor) domain BG05_4880 SM00448 cheY-homologous receiver domain BG05_4881 SM00138 Methyltransferase, chemotaxis proteins BG05_4882 SM00331 Sigma factor PP2C-like phosphatases BG05_4882 SM00448 cheY-homologous receiver domain BG05_4893 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_4899 SM01005 Alanine racemase, C-terminal domain BG05_490 SM00382 ATPases associated with a variety of cellular activities BG05_4911 SM00155 Phospholipase D. Active site motifs. BG05_4922 SM00460 Transglutaminase/protease-like homologues BG05_4930 SM01120 BG05_4930 BG05_4935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_4962 SM00530 Helix-turn-helix XRE-family like proteins BG05_4970 SM00487 DEAD-like helicases superfamily BG05_4974 SM00448 cheY-homologous receiver domain BG05_4975 SM00091 PAS domain BG05_4975 SM00387 Histidine kinase-like ATPases BG05_4997 SM00382 ATPases associated with a variety of cellular activities BG05_4998 SM00382 ATPases associated with a variety of cellular activities BG05_500 SM00936 Penicillin-binding protein 5, C-terminal domain BG05_501 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_501 SM01240 BG05_501 BG05_5014 SM00646 BG05_5014 BG05_5032 SM00729 Elongator protein 3, MiaB family, Radical SAM BG05_5039 SM00028 Tetratricopeptide repeats BG05_5050 SM00382 ATPases associated with a variety of cellular activities BG05_5052 SM00062 Bacterial periplasmic substrate-binding proteins BG05_5052 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG05_5053 SM00382 ATPases associated with a variety of cellular activities BG05_5054 SM00382 ATPases associated with a variety of cellular activities BG05_5070 SM00422 helix_turn_helix, mercury resistance BG05_5073 SM00344 helix_turn_helix ASNC type BG05_5078 SM00849 Metallo-beta-lactamase superfamily BG05_509 SM00434 DNA Topoisomerase IV BG05_510 SM00387 Histidine kinase-like ATPases BG05_510 SM00433 TopoisomeraseII BG05_5104 SM00382 ATPases associated with a variety of cellular activities BG05_5106 SM00287 Bacterial SH3 domain homologues BG05_5107 SM00567 E-Z type HEAT repeats BG05_5118 SM00829 Enoylreductase BG05_5120 SM00829 Enoylreductase BG05_5125 SM00450 Rhodanese Homology Domain BG05_5127 SM00450 Rhodanese Homology Domain BG05_5127 SM00849 Metallo-beta-lactamase superfamily BG05_5128 SM00450 Rhodanese Homology Domain BG05_513 SM00480 DNA polymerase III beta subunit BG05_5132 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_514 SM00382 ATPases associated with a variety of cellular activities BG05_514 SM00760 Bacterial dnaA protein helix-turn-helix domain BG05_5144 SM00354 helix_turn _helix lactose operon repressor BG05_5146 SM00640 Glycosyl hydrolases family 32 BG05_5153 SM00382 ATPases associated with a variety of cellular activities BG05_5158 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_5175 SM00382 ATPases associated with a variety of cellular activities BG05_5177 SM00287 Bacterial SH3 domain homologues BG05_518 SM00393 Putative single-stranded nucleic acids-binding domain BG05_518 SM01245 BG05_518 BG05_5180 SM00116 Domain in cystathionine beta-synthase and other proteins. BG05_520 SM01228 BG05_520 BG05_5210 SM00899 BG05_5210 BG05_522 SM00470 ParB-like nuclease domain BG05_5229 SM00530 Helix-turn-helix XRE-family like proteins BG05_5239 SM00530 Helix-turn-helix XRE-family like proteins BG05_524 SM00470 ParB-like nuclease domain BG05_5241 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_5249 SM00770 Zinc dependent phospholipase C (alpha toxin) BG05_5251 SM00829 Enoylreductase BG05_5259 SM00382 ATPases associated with a variety of cellular activities BG05_5262 SM00354 helix_turn _helix lactose operon repressor BG05_5264 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_5270 SM00448 cheY-homologous receiver domain BG05_5270 SM00862 Transcriptional regulatory protein, C terminal BG05_5271 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_5271 SM00387 Histidine kinase-like ATPases BG05_5271 SM00388 His Kinase A (phosphoacceptor) domain BG05_5281 SM00062 Bacterial periplasmic substrate-binding proteins BG05_5281 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG05_5282 SM00382 ATPases associated with a variety of cellular activities BG05_5288 SM00421 helix_turn_helix, Lux Regulon BG05_5288 SM00448 cheY-homologous receiver domain BG05_5289 SM00387 Histidine kinase-like ATPases BG05_5293 SM00642 Alpha-amylase domain BG05_5295 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_5295 SM00866 BG05_5295 BG05_5297 SM00052 Putative diguanylate phosphodiesterase BG05_5297 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG05_5297 SM00091 PAS domain BG05_5297 SM00267 diguanylate cyclase BG05_5299 SM00155 Phospholipase D. Active site motifs. BG05_5300 SM00382 ATPases associated with a variety of cellular activities BG05_5301 SM00327 von Willebrand factor (vWF) type A domain BG05_5306 SM00382 ATPases associated with a variety of cellular activities BG05_5312 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_5317 SM01091 Transporter associated domain BG05_5326 SM00028 Tetratricopeptide repeats BG05_5326 SM00530 Helix-turn-helix XRE-family like proteins BG05_5329 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_533 SM00267 diguanylate cyclase BG05_5332 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BG05_5332 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BG05_5335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BG05_5335 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BG05_5340 SM00448 cheY-homologous receiver domain BG05_5340 SM00862 Transcriptional regulatory protein, C terminal BG05_5341 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_5341 SM00387 Histidine kinase-like ATPases BG05_5341 SM00388 His Kinase A (phosphoacceptor) domain BG05_5343 SM00345 helix_turn_helix gluconate operon transcriptional repressor BG05_5346 SM00919 Malic enzyme, NAD binding domain BG05_5346 SM01274 BG05_5346 BG05_5348 SM00448 cheY-homologous receiver domain BG05_5349 SM00387 Histidine kinase-like ATPases BG05_5350 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_5350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_5353 SM00387 Histidine kinase-like ATPases BG05_5353 SM00388 His Kinase A (phosphoacceptor) domain BG05_5354 SM00448 cheY-homologous receiver domain BG05_5354 SM00862 Transcriptional regulatory protein, C terminal BG05_5359 SM00382 ATPases associated with a variety of cellular activities BG05_536 SM00788 Adenylosuccinate synthetase BG05_5362 SM00248 ankyrin repeats BG05_5366 SM00448 cheY-homologous receiver domain BG05_5367 SM00091 PAS domain BG05_5367 SM00387 Histidine kinase-like ATPases BG05_5368 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_5368 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_5369 SM00244 prohibitin homologues BG05_5371 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG05_5372 SM00365 Leucine-rich repeat, SDS22-like subfamily BG05_5372 SM00369 Leucine-rich repeats, typical (most populated) subfamily BG05_5372 SM00725 NEAr Transporter domain BG05_5374 SM00763 PrkA AAA domain BG05_5376 SM00052 Putative diguanylate phosphodiesterase BG05_5376 SM00091 PAS domain BG05_5376 SM00267 diguanylate cyclase BG05_5379 SM00567 E-Z type HEAT repeats BG05_5387 SM00860 SMI1 / KNR4 family BG05_5388 SM00860 SMI1 / KNR4 family BG05_5390 SM00028 Tetratricopeptide repeats BG05_5393 SM00857 Resolvase, N terminal domain BG05_541 SM00448 cheY-homologous receiver domain BG05_541 SM00862 Transcriptional regulatory protein, C terminal BG05_542 SM00091 PAS domain BG05_542 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_542 SM00387 Histidine kinase-like ATPases BG05_542 SM00388 His Kinase A (phosphoacceptor) domain BG05_5439 SM00382 ATPases associated with a variety of cellular activities BG05_545 SM00849 Metallo-beta-lactamase superfamily BG05_5450 SM00028 Tetratricopeptide repeats BG05_546 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_5462 SM00460 Transglutaminase/protease-like homologues BG05_5472 SM00287 Bacterial SH3 domain homologues BG05_5472 SM00644 BG05_5472 BG05_5478 SM00382 ATPases associated with a variety of cellular activities BG05_5484 SM00770 Zinc dependent phospholipase C (alpha toxin) BG05_5490 SM00710 Parallel beta-helix repeats BG05_5495 SM00287 Bacterial SH3 domain homologues BG05_5495 SM00644 BG05_5495 BG05_5509 SM00849 Metallo-beta-lactamase superfamily BG05_551 SM01240 BG05_551 BG05_5514 SM00966 SpoVT / AbrB like domain BG05_5519 SM00860 SMI1 / KNR4 family BG05_5528 SM00479 BG05_5528 BG05_553 SM00487 DEAD-like helicases superfamily BG05_553 SM00490 helicase superfamily c-terminal domain BG05_5535 SM00530 Helix-turn-helix XRE-family like proteins BG05_5537 SM00421 helix_turn_helix, Lux Regulon BG05_5538 SM00387 Histidine kinase-like ATPases BG05_5568 SM00507 HNH nucleases BG05_5569 SM00857 Resolvase, N terminal domain BG05_5580 SM00966 SpoVT / AbrB like domain BG05_5585 SM00823 Phosphopantetheine attachment site BG05_5586 SM00823 Phosphopantetheine attachment site BG05_5595 SM00060 Fibronectin type 3 domain BG05_5595 SM00495 Chitin-binding domain type 3 BG05_5596 SM00060 Fibronectin type 3 domain BG05_5596 SM00495 Chitin-binding domain type 3 BG05_5597 SM00060 Fibronectin type 3 domain BG05_5597 SM00495 Chitin-binding domain type 3 BG05_5597 SM01276 BG05_5597 BG05_5598 SM00387 Histidine kinase-like ATPases BG05_5599 SM00448 cheY-homologous receiver domain BG05_5599 SM00862 Transcriptional regulatory protein, C terminal BG05_5600 SM00382 ATPases associated with a variety of cellular activities BG05_5602 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_5604 SM00411 bacterial (prokaryotic) histone like domain BG05_5611 SM00849 Metallo-beta-lactamase superfamily BG05_5614 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BG05_5623 SM00858 BG05_5623 BG05_565 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG05_565 SM00387 Histidine kinase-like ATPases BG05_566 SM00448 cheY-homologous receiver domain BG05_566 SM00850 LytTr DNA-binding domain BG05_5670 SM00422 helix_turn_helix, mercury resistance BG05_5681 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins BG05_5694 SM00530 Helix-turn-helix XRE-family like proteins BG05_573 SM00382 ATPases associated with a variety of cellular activities BG05_5733 SM00257 Lysin motif BG05_5742 SM00966 SpoVT / AbrB like domain BG05_5753 SM00849 Metallo-beta-lactamase superfamily BG05_5758 SM00966 SpoVT / AbrB like domain BG05_5815 SM00530 Helix-turn-helix XRE-family like proteins BG05_5820 SM00530 Helix-turn-helix XRE-family like proteins BG05_5838 SM00860 SMI1 / KNR4 family BG05_586 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_592 SM00448 cheY-homologous receiver domain BG05_592 SM00850 LytTr DNA-binding domain BG05_595 SM00267 diguanylate cyclase BG05_597 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BG05_598 SM00421 helix_turn_helix, Lux Regulon BG05_598 SM00448 cheY-homologous receiver domain BG05_60 SM00226 Low molecular weight phosphatase family BG05_606 SM00354 helix_turn _helix lactose operon repressor BG05_608 SM00382 ATPases associated with a variety of cellular activities BG05_610 SM00986 Uracil DNA glycosylase superfamily BG05_610 SM00987 UreE urease accessory protein, C-terminal domain BG05_62 SM00831 Cation transporter/ATPase, N-terminus BG05_620 SM00936 Penicillin-binding protein 5, C-terminal domain BG05_628 SM00382 ATPases associated with a variety of cellular activities BG05_630 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BG05_636 SM00422 helix_turn_helix, mercury resistance BG05_644 SM00836 DALR anticodon binding domain BG05_644 SM01016 Arginyl tRNA synthetase N terminal dom BG05_648 SM00382 ATPases associated with a variety of cellular activities BG05_651 SM00421 helix_turn_helix, Lux Regulon BG05_651 SM00448 cheY-homologous receiver domain BG05_653 SM00530 Helix-turn-helix XRE-family like proteins BG05_654 SM00052 Putative diguanylate phosphodiesterase BG05_654 SM00091 PAS domain BG05_654 SM00267 diguanylate cyclase BG05_656 SM00155 Phospholipase D. Active site motifs. BG05_666 SM00448 cheY-homologous receiver domain BG05_671 SM00357 Cold shock protein domain BG05_671 SM00382 ATPases associated with a variety of cellular activities BG05_671 SM00959 Rho termination factor, N-terminal domain BG05_674 SM00937 BG05_674 BG05_682 SM00903 Flavin reductase like domain BG05_685 SM00226 Low molecular weight phosphatase family BG05_698 SM00382 ATPases associated with a variety of cellular activities BG05_702 SM00052 Putative diguanylate phosphodiesterase BG05_702 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BG05_702 SM00091 PAS domain BG05_702 SM00267 diguanylate cyclase BG05_71 SM00946 Prolyl-tRNA synthetase, C-terminal BG05_718 SM00850 LytTr DNA-binding domain BG05_719 SM00382 ATPases associated with a variety of cellular activities BG05_731 SM00382 ATPases associated with a variety of cellular activities BG05_75 SM00530 Helix-turn-helix XRE-family like proteins BG05_762 SM00382 ATPases associated with a variety of cellular activities BG05_778 SM00984 UDP binding domain BG05_782 SM00448 cheY-homologous receiver domain BG05_782 SM00862 Transcriptional regulatory protein, C terminal BG05_783 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_783 SM00387 Histidine kinase-like ATPases BG05_783 SM00388 His Kinase A (phosphoacceptor) domain BG05_788 SM00382 ATPases associated with a variety of cellular activities BG05_8 SM00478 endonuclease III BG05_8 SM00525 BG05_8 BG05_804 SM00487 DEAD-like helicases superfamily BG05_804 SM00490 helicase superfamily c-terminal domain BG05_809 SM00287 Bacterial SH3 domain homologues BG05_81 SM00060 Fibronectin type 3 domain BG05_81 SM00636 BG05_81 BG05_81 SM00637 BG05_81 BG05_815 SM00287 Bacterial SH3 domain homologues BG05_82 SM00382 ATPases associated with a variety of cellular activities BG05_83 SM00382 ATPases associated with a variety of cellular activities BG05_844 SM00754 A domain in the BMP inhibitor chordin and in microbial proteins. BG05_845 SM00382 ATPases associated with a variety of cellular activities BG05_848 SM00984 UDP binding domain BG05_855 SM00487 DEAD-like helicases superfamily BG05_855 SM00490 helicase superfamily c-terminal domain BG05_857 SM00357 Cold shock protein domain BG05_864 SM00382 ATPases associated with a variety of cellular activities BG05_867 SM00957 SecA DEAD-like domain BG05_867 SM00958 SecA preprotein cross-linking domain BG05_868 SM00937 BG05_868 BG05_87 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_87 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_870 SM00382 ATPases associated with a variety of cellular activities BG05_872 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BG05_872 SM00245 tail specific protease BG05_874 SM00382 ATPases associated with a variety of cellular activities BG05_876 SM00382 ATPases associated with a variety of cellular activities BG05_878 SM00422 helix_turn_helix, mercury resistance BG05_881 SM00530 Helix-turn-helix XRE-family like proteins BG05_886 SM00422 helix_turn_helix, mercury resistance BG05_889 SM00487 DEAD-like helicases superfamily BG05_889 SM00490 helicase superfamily c-terminal domain BG05_897 SM00028 Tetratricopeptide repeats BG05_91 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BG05_91 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BG05_91 SM00493 BG05_91 BG05_919 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BG05_923 SM01192 BG05_923 BG05_923 SM01193 BG05_923 BG05_929 SM00316 Ribosomal protein S1-like RNA-binding domain BG05_929 SM00357 Cold shock protein domain BG05_929 SM00955 BG05_929 BG05_932 SM00448 cheY-homologous receiver domain BG05_932 SM00862 Transcriptional regulatory protein, C terminal BG05_936 SM00382 ATPases associated with a variety of cellular activities BG05_939 SM01116 BG05_939 BG05_940 SM00947 Carbonic anhydrase BG05_941 SM00344 helix_turn_helix ASNC type BG05_943 SM00344 helix_turn_helix ASNC type BG05_95 SM00642 Alpha-amylase domain BG05_953 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_954 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BG05_956 SM00363 S4 RNA-binding domain BG05_97 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_97 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_98 SM00382 ATPases associated with a variety of cellular activities BG05_980 SM00347 helix_turn_helix multiple antibiotic resistance protein BG05_985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_986 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BG05_986 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BG05_99 SM00062 Bacterial periplasmic substrate-binding proteins BG05_99 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BG05_990 SM00387 Histidine kinase-like ATPases BG05_990 SM00388 His Kinase A (phosphoacceptor) domain BG05_991 SM00448 cheY-homologous receiver domain BG05_991 SM00862 Transcriptional regulatory protein, C terminal BG05_995 SM00530 Helix-turn-helix XRE-family like proteins