locus-tag	class	description
J5V76_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J5V76_00010	COG0592	DNA-directed DNA polymerase activity
J5V76_00015	COG2501	S4 domain
J5V76_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5V76_00025	COG0187	DNA topoisomerase II activity
J5V76_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V76_00065	COG0516	GMP reductase activity
J5V76_00065	COG0517	IMP dehydrogenase activity
J5V76_00070	COG1686	Belongs to the peptidase S11 family
J5V76_00075	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
J5V76_00080	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
J5V76_00100	COG1428	Deoxynucleoside kinase
J5V76_00105	COG1428	Deoxynucleoside kinase
J5V76_00110	COG1335	isochorismatase
J5V76_00115	COG0590	tRNA wobble adenosine to inosine editing
J5V76_00125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J5V76_00130	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J5V76_00135	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J5V76_00180	COG1982	Orn Lys Arg decarboxylase major
J5V76_00185	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J5V76_00190	COG0470	DNA polymerase III
J5V76_00195	COG1774	PSP1 C-terminal conserved region
J5V76_00200	COG4467	Involved in initiation control of chromosome replication
J5V76_00205	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J5V76_00215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J5V76_00220	COG2002	toxin-antitoxin pair type II binding
J5V76_00230	COG0084	hydrolase, TatD family'
J5V76_00240	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J5V76_00250	COG4466	Protein conserved in bacteria
J5V76_00260	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J5V76_00265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V76_00270	COG0251	oxidation-reduction process
J5V76_00275	COG2088	sporulation resulting in formation of a cellular spore
J5V76_00280	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J5V76_00300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J5V76_00305	COG2002	toxin-antitoxin pair type II binding
J5V76_00310	COG2244	polysaccharide biosynthetic process
J5V76_00315	COG3956	TIGRFAM MazG family protein
J5V76_00320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
J5V76_00340	COG1098	S1 RNA binding domain
J5V76_00355	COG2208	phosphoserine phosphatase activity
J5V76_00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V76_00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J5V76_00375	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
J5V76_00380	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J5V76_00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V76_00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J5V76_00395	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V76_00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V76_00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J5V76_00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J5V76_00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J5V76_00420	COG1396	sequence-specific DNA binding
J5V76_00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V76_00430	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J5V76_00515	COG3880	PFAM UvrB UvrC protein
J5V76_00520	COG3869	Catalyzes the specific phosphorylation of arginine residues in
J5V76_00525	COG0542	response to heat
J5V76_00530	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J5V76_00535	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
J5V76_00540	COG4956	integral membrane protein (PIN domain superfamily)
J5V76_00545	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J5V76_00555	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5V76_00560	COG1045	serine acetyltransferase
J5V76_00565	COG0215	cysteine-tRNA ligase activity
J5V76_00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V76_00580	COG3688	RNA-binding protein containing a PIN domain
J5V76_00590	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V76_00595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V76_00600	COG0250	Participates in transcription elongation, termination and antitermination
J5V76_00605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J5V76_00610	COG0081	regulation of translation
J5V76_00615	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J5V76_00620	COG0222	ribosome binding
J5V76_00625	COG2813	Specifically methylates the guanine in position
J5V76_00630	COG0085	RNA polymerase activity
J5V76_00635	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J5V76_00640	COG1358	cellular component organization or biogenesis
J5V76_00645	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J5V76_00650	COG0049	tRNA binding
J5V76_00655	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J5V76_00660	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J5V76_00665	COG0051	transcription antitermination factor activity, RNA binding
J5V76_00670	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J5V76_00675	COG0088	Forms part of the polypeptide exit tunnel
J5V76_00680	COG0089	rRNA binding
J5V76_00685	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J5V76_00690	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J5V76_00695	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J5V76_00705	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
J5V76_00710	COG0255	Belongs to the universal ribosomal protein uL29 family
J5V76_00715	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J5V76_00720	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
J5V76_00725	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J5V76_00730	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J5V76_00740	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J5V76_00750	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J5V76_00760	COG1841	ribosomal large subunit assembly
J5V76_00765	COG0200	Binds to the 23S rRNA
J5V76_00770	COG0201	protein transport
J5V76_00775	COG0563	adenylate kinase activity
J5V76_00780	COG0024	Methionine aminopeptidase
J5V76_00790	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J5V76_00795	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J5V76_00800	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J5V76_00825	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J5V76_00835	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J5V76_00840	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J5V76_00850	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_00855	COG0489	protein tyrosine kinase activity
J5V76_00865	COG2194	sulfuric ester hydrolase activity
J5V76_00870	COG0726	polysaccharide deacetylase
J5V76_00950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J5V76_00955	COG4856	YbbR-like protein
J5V76_00960	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V76_00970	COG4946	Tricorn protease homolog
J5V76_00970	COG1506	peptidase
J5V76_00970	COG0823	Involved in the tonB-independent uptake of proteins
J5V76_00995	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_01000	COG2011	ABC-type metal ion transport system permease component
J5V76_01010	COG1464	Belongs to the NlpA lipoprotein family
J5V76_01015	COG0604	alcohol dehydrogenase
J5V76_01025	COG0277	FAD linked oxidase domain protein
J5V76_01030	COG2271	Major facilitator Superfamily
J5V76_01040	COG2814	Major facilitator Superfamily
J5V76_01055	COG0601	transmembrane transport
J5V76_01060	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V76_01065	COG0444	Belongs to the ABC transporter superfamily
J5V76_01070	COG4608	Belongs to the ABC transporter superfamily
J5V76_01075	COG4166	transmembrane transport
J5V76_01085	COG2207	Transcriptional regulator
J5V76_01100	COG4166	transmembrane transport
J5V76_01105	COG4166	transmembrane transport
J5V76_01110	COG0656	L-ascorbic acid biosynthetic process
J5V76_01115	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V76_01130	COG4149	molybdate abc transporter
J5V76_01135	COG0725	ABC transporter, periplasmic molybdate-binding protein
J5V76_01140	COG1910	domain protein
J5V76_01155	COG0697	spore germination
J5V76_01170	COG0204	Acyl-transferase
J5V76_01180	COG1609	Transcriptional regulator
J5V76_01190	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_01205	COG5298	Protein conserved in bacteria
J5V76_01225	COG0488	(ABC) transporter
J5V76_01235	COG0747	negative chemotaxis
J5V76_01240	COG0747	negative chemotaxis
J5V76_01245	COG0601	transmembrane transport
J5V76_01250	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V76_01255	COG0444	Belongs to the ABC transporter superfamily
J5V76_01260	COG4608	Belongs to the ABC transporter superfamily
J5V76_01265	COG0561	phosphatase activity
J5V76_01295	COG3185	4-Hydroxyphenylpyruvate dioxygenase
J5V76_01300	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V76_01310	COG0531	amino acid
J5V76_01315	COG2814	Major facilitator Superfamily
J5V76_01325	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J5V76_01335	COG4294	response to UV
J5V76_01340	COG0705	Rhomboid family
J5V76_01345	COG0736	holo-[acyl-carrier-protein] synthase activity
J5V76_01350	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J5V76_01355	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5V76_01360	COG0864	Transcriptional regulator
J5V76_01365	COG2337	Toxic component of a toxin-antitoxin (TA) module
J5V76_01370	COG2183	response to ionizing radiation
J5V76_01470	COG0802	atpase or kinase
J5V76_01475	COG1214	PFAM Peptidase M22, glycoprotease
J5V76_01480	COG0456	acetyltransferase
J5V76_01490	COG0488	(ABC) transporter
J5V76_01495	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
J5V76_01505	COG1266	CAAX protease self-immunity
J5V76_01510	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J5V76_01515	COG0459	protein refolding
J5V76_01520	COG0519	Catalyzes the synthesis of GMP from XMP
J5V76_01520	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J5V76_01525	COG2252	PERMEase
J5V76_01535	COG5002	protein histidine kinase activity
J5V76_01560	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5V76_01590	COG2226	methyltransferase
J5V76_01650	COG2205	protein histidine kinase activity
J5V76_01655	COG0745	RESPONSE REGULATOR receiver
J5V76_01675	COG0697	spore germination
J5V76_01700	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J5V76_01705	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J5V76_01710	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J5V76_01715	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J5V76_01720	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V76_01725	COG0047	phosphoribosylformylglycinamidine synthase activity
J5V76_01730	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V76_01735	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J5V76_01740	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J5V76_01745	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J5V76_01750	COG0138	bifunctional purine biosynthesis protein purh
J5V76_01755	COG0151	Belongs to the GarS family
J5V76_01775	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
J5V76_01780	COG0210	DNA helicase
J5V76_01785	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J5V76_01790	COG4851	CamS sex pheromone cAM373 precursor
J5V76_01800	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_01805	COG1335	isochorismatase
J5V76_01815	COG2011	ABC-type metal ion transport system permease component
J5V76_01820	COG1464	Belongs to the NlpA lipoprotein family
J5V76_01835	COG0003	Pfam Anion-transporting ATPase
J5V76_01840	COG1846	Transcriptional regulator
J5V76_01845	COG4682	membrane
J5V76_01855	COG0154	amidase activity
J5V76_01860	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J5V76_01865	COG1597	lipid kinase activity
J5V76_01875	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V76_01885	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_01890	COG2076	Multidrug Resistance protein
J5V76_01895	COG2309	aminopeptidase activity
J5V76_01910	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_01920	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V76_01925	COG5002	protein histidine kinase activity
J5V76_01935	COG4807	Protein conserved in bacteria
J5V76_01960	COG1757	Na H antiporter
J5V76_01965	COG1473	amidohydrolase
J5V76_01980	COG0450	alkyl hydroperoxide reductase
J5V76_01990	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V76_02000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_02005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_02010	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_02015	COG0492	ferredoxin-NADP+ reductase activity
J5V76_02025	COG0166	Belongs to the GPI family
J5V76_02050	COG5002	protein histidine kinase activity
J5V76_02070	COG3541	Predicted nucleotidyltransferase
J5V76_02075	COG0723	plastoquinol--plastocyanin reductase activity
J5V76_02075	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V76_02085	COG0765	amino acid transport
J5V76_02090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_02100	COG0840	transmembrane signaling receptor activity
J5V76_02105	COG0277	FAD linked oxidase domain protein
J5V76_02110	COG0366	Alpha amylase catalytic
J5V76_02115	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V76_02115	COG1263	PTS System
J5V76_02115	COG2190	(PTS) system
J5V76_02135	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
J5V76_02140	COG0352	thiamine-phosphate diphosphorylase activity
J5V76_02145	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
J5V76_02160	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V76_02165	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V76_02170	COG1116	anion transmembrane transporter activity
J5V76_02175	COG0488	(ABC) transporter
J5V76_02210	COG2270	Major facilitator Superfamily
J5V76_02245	COG2310	stress, protein
J5V76_02250	COG2310	stress, protein
J5V76_02255	COG2310	stress, protein
J5V76_02260	COG0861	Integral membrane protein TerC family
J5V76_02270	COG3853	Toxic anion resistance protein (TelA)
J5V76_02280	COG4840	Belongs to the UPF0435 family
J5V76_02285	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J5V76_02295	COG1295	ribonuclease BN
J5V76_02300	COG2217	Heavy metal translocating P-type atpase
J5V76_02305	COG0697	spore germination
J5V76_02325	COG0586	Pfam SNARE associated Golgi protein
J5V76_02340	COG3871	stress protein (general stress protein 26)
J5V76_02345	COG0387	Pfam Sodium calcium exchanger
J5V76_02355	COG0535	radical SAM domain protein
J5V76_02375	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V76_02395	COG3829	transcription factor binding
J5V76_02405	COG0833	amino acid
J5V76_02410	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V76_02430	COG2066	Belongs to the glutaminase family
J5V76_02435	COG1263	PTS System
J5V76_02435	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V76_02440	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_02455	COG1216	Glycosyl transferase, family 2
J5V76_02465	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V76_02465	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V76_02470	COG0463	Glycosyl transferase, family 2
J5V76_02485	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J5V76_02490	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J5V76_02505	COG1228	amidohydrolase
J5V76_02510	COG1090	epimerase
J5V76_02515	COG2137	regulation of response to DNA damage stimulus
J5V76_02540	COG1988	membrane-bound metal-dependent
J5V76_02545	COG1194	a g-specific adenine glycosylase
J5V76_02570	COG3557	Belongs to the UPF0374 family
J5V76_02575	COG1132	(ABC) transporter
J5V76_02580	COG4129	membrane
J5V76_02585	COG0070	glutamate synthase
J5V76_02585	COG0069	glutamate synthase activity
J5V76_02585	COG0067	glutamate synthase
J5V76_02590	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V76_02595	COG4555	ABC transporter
J5V76_02615	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J5V76_02620	COG0735	belongs to the Fur family
J5V76_02725	COG4974	Belongs to the 'phage' integrase family
J5V76_02810	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
J5V76_02815	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J5V76_02835	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J5V76_02845	COG2766	serine protein kinase
J5V76_02850	COG2718	Belongs to the UPF0229 family
J5V76_02865	COG1585	Membrane protein implicated in regulation of membrane protease activity
J5V76_02870	COG2268	Band 7 protein
J5V76_02880	COG3290	protein histidine kinase activity
J5V76_02885	COG4565	transcriptional regulatory protein
J5V76_02890	COG2851	Citrate transporter
J5V76_02915	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V76_02920	COG3842	ATPase activity
J5V76_02925	COG1175	transmembrane transport
J5V76_02930	COG0395	ABC-type sugar transport system, permease component
J5V76_02940	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V76_02945	COG0745	RESPONSE REGULATOR receiver
J5V76_02950	COG5002	protein histidine kinase activity
J5V76_02960	COG4990	cell redox homeostasis
J5V76_02970	COG3290	protein histidine kinase activity
J5V76_02975	COG4565	transcriptional regulatory protein
J5V76_02980	COG3493	citrate carrier protein
J5V76_02985	COG0281	malic enzyme
J5V76_02995	COG0697	spore germination
J5V76_03000	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_03010	COG5002	protein histidine kinase activity
J5V76_03015	COG0745	RESPONSE REGULATOR receiver
J5V76_03020	COG0456	acetyltransferase
J5V76_03025	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V76_03030	COG3383	formate dehydrogenase (NAD+) activity
J5V76_03035	COG2427	Protein of unknown function (DUF1641)
J5V76_03050	COG0531	amino acid
J5V76_03060	COG0640	Transcriptional regulator
J5V76_03065	COG2217	Heavy metal translocating P-type atpase
J5V76_03070	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
J5V76_03085	COG3227	Zinc metalloprotease (Elastase)
J5V76_03105	COG2720	vancomycin resistance protein
J5V76_03110	COG1316	TRANSCRIPTIONal
J5V76_03115	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_03120	COG0346	lactoylglutathione lyase activity
J5V76_03125	COG1253	flavin adenine dinucleotide binding
J5V76_03130	COG1027	Aspartate ammonia-lyase
J5V76_03135	COG1620	l-lactate permease
J5V76_03140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_03155	COG3104	oligopeptide transport
J5V76_03160	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_03165	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_03170	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_03180	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V76_03185	COG0156	8-amino-7-oxononanoate synthase activity
J5V76_03190	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V76_03200	COG4548	von Willebrand factor, type A
J5V76_03205	COG0714	Associated with various cellular activities
J5V76_03225	COG0531	amino acid
J5V76_03230	COG2188	Transcriptional regulator
J5V76_03235	COG1263	PTS System
J5V76_03235	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V76_03240	COG0366	Alpha amylase catalytic
J5V76_03255	COG0697	spore germination
J5V76_03260	COG4585	Histidine kinase
J5V76_03270	COG1404	Belongs to the peptidase S8 family
J5V76_03285	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V76_03290	COG1115	amino acid carrier protein
J5V76_03295	COG1126	abc transporter atp-binding protein
J5V76_03300	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_03305	COG0765	amino acid transport
J5V76_03310	COG0765	amino acid transport
J5V76_03315	COG0833	amino acid
J5V76_03340	COG2378	regulation of single-species biofilm formation
J5V76_03345	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
J5V76_03350	COG5002	protein histidine kinase activity
J5V76_03370	COG2814	Major facilitator Superfamily
J5V76_03375	COG0659	secondary active sulfate transmembrane transporter activity
J5V76_03390	COG0747	negative chemotaxis
J5V76_03400	COG0601	transmembrane transport
J5V76_03405	COG4608	Belongs to the ABC transporter superfamily
J5V76_03415	COG2271	Major facilitator Superfamily
J5V76_03420	COG1846	Transcriptional regulator
J5V76_03425	COG0477	Major facilitator Superfamily
J5V76_03430	COG1609	Transcriptional regulator
J5V76_03435	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J5V76_03440	COG1869	D-ribose catabolic process
J5V76_03450	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V76_03455	COG1879	ABC-type sugar transport system periplasmic component
J5V76_03485	COG1063	alcohol dehydrogenase
J5V76_03500	COG3568	Endonuclease Exonuclease Phosphatase
J5V76_03530	COG0840	transmembrane signaling receptor activity
J5V76_03535	COG3584	3D domain protein
J5V76_03535	COG3583	domain protein
J5V76_03540	COG1476	TRANSCRIPTIONal
J5V76_03560	COG3104	oligopeptide transport
J5V76_03565	COG1114	Component of the transport system for branched-chain amino acids
J5V76_03580	COG1113	amino acid transport
J5V76_03585	COG2252	PERMEase
J5V76_03600	COG2153	protein acetylation
J5V76_03610	COG0475	glutathione-regulated potassium exporter activity
J5V76_03610	COG0569	domain protein
J5V76_03620	COG1845	cytochrome c oxidase, subunit III
J5V76_03625	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J5V76_03635	COG0833	amino acid
J5V76_03640	COG4990	cell redox homeostasis
J5V76_03655	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V76_03660	COG0697	spore germination
J5V76_03665	COG0531	amino acid
J5V76_03675	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V76_03680	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V76_03690	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V76_03695	COG0573	inorganic phosphate transmembrane transporter activity
J5V76_03700	COG0581	inorganic phosphate transmembrane transporter activity
J5V76_03705	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V76_03825	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
J5V76_03840	COG3103	Sh3 type 3 domain protein
J5V76_03840	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_03840	COG4991	sh3 domain protein
J5V76_03845	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V76_03850	COG1116	anion transmembrane transporter activity
J5V76_03855	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V76_03860	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V76_03865	COG0352	thiamine-phosphate diphosphorylase activity
J5V76_03870	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V76_03875	COG2104	thiamine diphosphate biosynthetic process
J5V76_03885	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V76_03890	COG0351	phosphomethylpyrimidine kinase
J5V76_03915	COG2060	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane
J5V76_03920	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
J5V76_03925	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
J5V76_03930	COG2205	protein histidine kinase activity
J5V76_03935	COG2814	Major facilitator Superfamily
J5V76_03940	COG1846	Transcriptional regulator
J5V76_03960	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V76_03965	COG1129	ABC transporter
J5V76_03970	COG1879	ABC-type sugar transport system periplasmic component
J5V76_03975	COG2252	PERMEase
J5V76_03980	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_04040	COG0778	Nitroreductase
J5V76_04045	COG2719	SpoVR family
J5V76_04080	COG1937	Protein conserved in bacteria
J5V76_04085	COG0425	Belongs to the sulfur carrier protein TusA family
J5V76_04085	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_04090	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_04090	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_04095	COG0425	Belongs to the sulfur carrier protein TusA family
J5V76_04100	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_04100	COG0425	Belongs to the sulfur carrier protein TusA family
J5V76_04105	COG2210	Belongs to the sulfur carrier protein TusA family
J5V76_04110	COG0730	response to heat
J5V76_04120	COG1316	TRANSCRIPTIONal
J5V76_04140	COG1283	sodium-dependent phosphate transmembrane transporter activity
J5V76_04155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V76_04155	COG3711	transcriptional antiterminator
J5V76_04160	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V76_04165	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V76_04190	COG3584	3D domain protein
J5V76_04190	COG1388	LysM domain
J5V76_04195	COG0577	efflux transmembrane transporter activity
J5V76_04200	COG1136	(ABC) transporter
J5V76_04210	COG5522	Integral membrane protein (intg_mem_TP0381)
J5V76_04225	COG0577	efflux transmembrane transporter activity
J5V76_04230	COG1114	Component of the transport system for branched-chain amino acids
J5V76_04235	COG3546	catalase activity
J5V76_04260	COG0586	Pfam SNARE associated Golgi protein
J5V76_04295	COG0531	amino acid
J5V76_04300	COG0475	glutathione-regulated potassium exporter activity
J5V76_04310	COG1737	Transcriptional regulator
J5V76_04315	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
J5V76_04320	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V76_04320	COG1263	PTS System
J5V76_04330	COG2259	Doxx family
J5V76_04350	COG0697	spore germination
J5V76_04355	COG1522	sequence-specific DNA binding
J5V76_04365	COG0300	oxidoreductase activity
J5V76_04380	COG2076	Multidrug Resistance protein
J5V76_04385	COG1309	transcriptional regulator
J5V76_04390	COG2814	Major facilitator Superfamily
J5V76_04395	COG1733	regulation of RNA biosynthetic process
J5V76_04420	COG0693	protein deglycase activity
J5V76_04430	COG0531	amino acid
J5V76_04435	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_04440	COG1132	(ABC) transporter
J5V76_04445	COG1132	(ABC) transporter
J5V76_04450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_04455	COG0765	amino acid transport
J5V76_04460	COG1126	abc transporter atp-binding protein
J5V76_04475	COG0189	ligase activity
J5V76_04485	COG4399	Belongs to the UPF0754 family
J5V76_04490	COG3679	Belongs to the UPF0342 family
J5V76_04505	COG0028	Belongs to the TPP enzyme family
J5V76_04510	COG3527	Alpha-acetolactate decarboxylase
J5V76_04515	COG0463	Glycosyl transferase, family 2
J5V76_04520	COG1216	Glycosyl transferase, family 2
J5V76_04525	COG2094	Belongs to the DNA glycosylase MPG family
J5V76_04530	COG0561	phosphatase activity
J5V76_04540	COG5632	N-Acetylmuramoyl-L-alanine amidase
J5V76_04540	COG3409	Peptidoglycan-binding domain 1 protein
J5V76_04545	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V76_04550	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_04555	COG0586	Pfam SNARE associated Golgi protein
J5V76_04565	COG0789	Transcriptional regulator
J5V76_04565	COG4978	Transcriptional regulator
J5V76_04575	COG0659	secondary active sulfate transmembrane transporter activity
J5V76_04590	COG0653	protein targeting
J5V76_04595	COG2244	polysaccharide biosynthetic process
J5V76_04605	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_04610	COG4196	transglutaminase domain protein
J5V76_04635	COG1024	Enoyl-CoA hydratase
J5V76_04655	COG1363	Peptidase, m42
J5V76_04670	COG2318	DinB family
J5V76_04690	COG0579	oxidoreductase
J5V76_04740	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V76_04745	COG0444	Belongs to the ABC transporter superfamily
J5V76_04750	COG4608	Belongs to the ABC transporter superfamily
J5V76_04775	COG0477	Major facilitator Superfamily
J5V76_04780	COG3290	protein histidine kinase activity
J5V76_04785	COG4565	transcriptional regulatory protein
J5V76_04790	COG3181	Tripartite tricarboxylate transporter family receptor
J5V76_04815	COG2801	Transposase and inactivated derivatives
J5V76_04860	COG0305	Participates in initiation and elongation during chromosome replication
J5V76_04895	COG0477	Major facilitator Superfamily
J5V76_04935	COG2814	Major facilitator Superfamily
J5V76_04940	COG0640	Transcriptional regulator
J5V76_04975	COG2376	Dihydroxyacetone kinase
J5V76_04985	COG2376	Dihydroxyacetone kinase
J5V76_05010	COG2337	Toxic component of a toxin-antitoxin (TA) module
J5V76_05030	COG2720	vancomycin resistance protein
J5V76_05085	COG0825	malonyl-CoA metabolic process
J5V76_05105	COG3237	CsbD-like
J5V76_05125	COG2172	sigma factor antagonist activity
J5V76_05130	COG1191	sigma factor activity
J5V76_05140	COG2208	phosphoserine phosphatase activity
J5V76_05145	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V76_05150	COG0784	Response regulator, receiver
J5V76_05150	COG2205	protein histidine kinase activity
J5V76_05150	COG5002	protein histidine kinase activity
J5V76_05185	COG2807	transmembrane transport
J5V76_05200	COG4585	Histidine kinase
J5V76_05205	COG2197	response regulator
J5V76_05235	COG0420	3'-5' exonuclease activity
J5V76_05240	COG4717	serine-type aminopeptidase activity
J5V76_05245	COG3481	metal-dependent phosphohydrolase, HD sub domain
J5V76_05285	COG0346	lactoylglutathione lyase activity
J5V76_05290	COG0346	lactoylglutathione lyase activity
J5V76_05295	COG0457	Tetratricopeptide repeat
J5V76_05305	COG2267	carboxylic ester hydrolase activity
J5V76_05320	COG3620	sequence-specific DNA binding
J5V76_05340	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V76_05345	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J5V76_05350	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J5V76_05355	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J5V76_05360	COG1695	Transcriptional regulator
J5V76_05380	COG0693	protein deglycase activity
J5V76_05385	COG1595	DNA-templated transcription, initiation
J5V76_05405	COG3973	AAA domain
J5V76_05410	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V76_05425	COG1846	Transcriptional regulator
J5V76_05435	COG0537	adenosine 5'-monophosphoramidase activity
J5V76_05440	COG1131	(ABC) transporter
J5V76_05445	COG4473	ABC transporter
J5V76_05455	COG0247	lactate metabolic process
J5V76_05460	COG1139	Iron-sulfur cluster binding protein
J5V76_05465	COG1556	Lactate utilization protein
J5V76_05485	COG3402	PFAM membrane-flanked domain
J5V76_05490	COG3428	Bacterial PH domain
J5V76_05530	COG3402	PFAM membrane-flanked domain
J5V76_05535	COG3428	Bacterial PH domain
J5V76_05540	COG2329	Antibiotic biosynthesis monooxygenase
J5V76_05545	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_05550	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J5V76_05555	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
J5V76_05560	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V76_05580	COG1309	transcriptional regulator
J5V76_05585	COG1511	domain protein
J5V76_05615	COG1609	Transcriptional regulator
J5V76_05625	COG1234	tRNA 3'-trailer cleavage
J5V76_05630	COG0095	Lipoate-protein ligase
J5V76_05640	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_05655	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
J5V76_05665	COG4208	sulfate ABC transporter
J5V76_05700	COG1408	metallophosphoesterase
J5V76_05705	COG1078	dGTPase activity
J5V76_05720	COG1595	DNA-templated transcription, initiation
J5V76_05725	COG3708	Transcriptional regulator
J5V76_05725	COG2207	Transcriptional regulator
J5V76_05730	COG2205	protein histidine kinase activity
J5V76_05735	COG0745	RESPONSE REGULATOR receiver
J5V76_05755	COG0501	Belongs to the peptidase M48B family
J5V76_05760	COG0840	transmembrane signaling receptor activity
J5V76_05765	COG0697	spore germination
J5V76_05785	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
J5V76_05790	COG2224	Isocitrate lyase
J5V76_05800	COG1278	Cold shock
J5V76_05810	COG4903	ComK protein
J5V76_05820	COG0398	Pfam SNARE associated Golgi protein
J5V76_05830	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
J5V76_05835	COG1074	ATP-dependent DNA helicase activity
J5V76_05885	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V76_05910	COG0367	asparagine synthase
J5V76_05920	COG0753	catalase activity
J5V76_05925	COG0004	ammonium transporteR
J5V76_05935	COG1666	GTP binding
J5V76_05940	COG2996	Protein conserved in bacteria
J5V76_05950	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V76_05975	COG0561	phosphatase activity
J5V76_05995	COG2267	carboxylic ester hydrolase activity
J5V76_06010	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V76_06015	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J5V76_06020	COG5504	Zn-dependent protease
J5V76_06030	COG0180	Tryptophanyl-tRNA synthetase
J5V76_06040	COG4166	transmembrane transport
J5V76_06045	COG0601	transmembrane transport
J5V76_06050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V76_06055	COG0444	Belongs to the ABC transporter superfamily
J5V76_06060	COG4608	Belongs to the ABC transporter superfamily
J5V76_06065	COG0534	Mate efflux family protein
J5V76_06070	COG4166	transmembrane transport
J5V76_06085	COG0861	Integral membrane protein TerC family
J5V76_06090	COG4862	establishment of competence for transformation
J5V76_06095	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V76_06105	COG1164	Oligoendopeptidase f
J5V76_06120	COG2346	COG2346, Truncated hemoglobins
J5V76_06125	COG4116	CYTH
J5V76_06135	COG2357	RelA SpoT domain protein
J5V76_06145	COG0564	pseudouridine synthase activity
J5V76_06155	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V76_06160	COG0772	Belongs to the SEDS family
J5V76_06165	COG1216	Glycosyl transferase, family 2
J5V76_06185	COG0457	Tetratricopeptide repeat
J5V76_06185	COG0463	Glycosyl transferase, family 2
J5V76_06205	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J5V76_06220	COG1091	dTDP-4-dehydrorhamnose reductase activity
J5V76_06265	COG2153	protein acetylation
J5V76_06270	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J5V76_06275	COG2382	esterase
J5V76_06300	COG5492	domain, Protein
J5V76_06305	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V76_06315	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V76_06315	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V76_06320	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V76_06325	COG0134	indole-3-glycerol-phosphate synthase activity
J5V76_06330	COG0135	phosphoribosylanthranilate isomerase activity
J5V76_06335	COG0133	tryptophan synthase activity
J5V76_06340	COG0159	tryptophan synthase activity
J5V76_06350	COG1620	l-lactate permease
J5V76_06355	COG5634	Uncharacterized conserved protein (DUF2278)
J5V76_06395	COG2226	methyltransferase
J5V76_06415	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V76_06420	COG0567	Dehydrogenase, E1 component
J5V76_06425	COG1476	TRANSCRIPTIONal
J5V76_06450	COG4152	abc transporter atp-binding protein
J5V76_06455	COG1668	transmembrane transport
J5V76_06475	COG1686	Belongs to the peptidase S11 family
J5V76_06480	COG0681	Belongs to the peptidase S26 family
J5V76_06515	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_06525	COG1176	ABC-type spermidine putrescine transport system, permease component I
J5V76_06530	COG1177	transmembrane transport
J5V76_06535	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
J5V76_06545	COG2409	Drug exporters of the RND superfamily
J5V76_06555	COG0564	pseudouridine synthase activity
J5V76_06565	COG2340	Cysteine-rich secretory protein family
J5V76_06570	COG0247	lactate metabolic process
J5V76_06575	COG0277	FAD linked oxidase domain protein
J5V76_06580	COG3835	regulator
J5V76_06590	COG0745	RESPONSE REGULATOR receiver
J5V76_06595	COG3850	Histidine kinase
J5V76_06595	COG5002	protein histidine kinase activity
J5V76_06600	COG2186	Transcriptional regulator
J5V76_06605	COG0247	lactate metabolic process
J5V76_06610	COG1139	Iron-sulfur cluster binding protein
J5V76_06615	COG1556	Lactate utilization protein
J5V76_06620	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
J5V76_06630	COG2116	formate transmembrane transporter activity
J5V76_06635	COG0861	Integral membrane protein TerC family
J5V76_06640	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V76_06650	COG2030	dehydratase
J5V76_06670	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_06675	COG3243	poly(R)-hydroxyalkanoic acid synthase
J5V76_06685	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V76_06700	COG1840	ABC-type Fe3 transport system, periplasmic component
J5V76_06705	COG3842	ATPase activity
J5V76_06715	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V76_06720	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J5V76_06730	COG1349	DNA-binding transcription factor activity
J5V76_06740	COG0235	Class ii aldolase
J5V76_06750	COG2861	carbohydrate metabolic process
J5V76_06760	COG3852	Histidine kinase
J5V76_06765	COG1846	Transcriptional regulator
J5V76_06775	COG2318	DinB family
J5V76_06780	COG5002	protein histidine kinase activity
J5V76_06785	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J5V76_06790	COG0720	synthase
J5V76_06800	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J5V76_06805	COG4873	Protein conserved in bacteria
J5V76_06820	COG0456	acetyltransferase
J5V76_06835	COG1780	Probably involved in ribonucleotide reductase function
J5V76_06850	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J5V76_06855	COG0531	amino acid
J5V76_06860	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5V76_06875	COG2204	response regulator
J5V76_06880	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_06890	COG1725	Transcriptional regulator
J5V76_06895	COG1131	(ABC) transporter
J5V76_06905	COG1131	(ABC) transporter
J5V76_06910	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V76_06925	COG1522	sequence-specific DNA binding
J5V76_06935	COG1335	isochorismatase
J5V76_06945	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V76_06950	COG2070	2-Nitropropane dioxygenase
J5V76_06955	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V76_06960	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V76_06965	COG1696	Membrane protein involved in D-alanine export
J5V76_06970	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5V76_06990	COG0716	FMN binding
J5V76_07025	COG0534	Mate efflux family protein
J5V76_07045	COG1846	Transcriptional regulator
J5V76_07060	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V76_07070	COG3874	Sporulation protein YtfJ
J5V76_07090	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V76_07095	COG0028	Belongs to the TPP enzyme family
J5V76_07100	COG0440	acetolactate synthase activity
J5V76_07110	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V76_07120	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J5V76_07130	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
J5V76_07135	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J5V76_07145	COG0131	Imidazoleglycerol-phosphate dehydratase
J5V76_07150	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J5V76_07155	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J5V76_07160	COG0107	imidazoleglycerol-phosphate synthase activity
J5V76_07170	COG0140	phosphoribosyl-ATP diphosphatase activity
J5V76_07175	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V76_07190	COG1183	phosphatidylcholine synthase activity
J5V76_07195	COG1368	sulfuric ester hydrolase activity
J5V76_07205	COG0019	diaminopimelate decarboxylase activity
J5V76_07215	COG0175	sulfate reduction
J5V76_07220	COG2046	Belongs to the sulfate adenylyltransferase family
J5V76_07225	COG0529	Catalyzes the synthesis of activated sulfate
J5V76_07230	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J5V76_07250	COG1648	precorrin-2 dehydrogenase activity
J5V76_07255	COG0733	neurotransmitter:sodium symporter activity
J5V76_07280	COG1757	Na H antiporter
J5V76_07300	COG4758	membrane
J5V76_07305	COG4585	Histidine kinase
J5V76_07310	COG2197	response regulator
J5V76_07320	COG1114	Component of the transport system for branched-chain amino acids
J5V76_07330	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V76_07370	COG0730	response to heat
J5V76_07375	COG0306	phosphate transporter
J5V76_07380	COG1392	Phosphate transport regulator
J5V76_07385	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_07400	COG3852	Histidine kinase
J5V76_07405	COG1801	Protein of unknown function DUF72
J5V76_07415	COG0582	viral genome integration into host DNA
J5V76_07420	COG5002	protein histidine kinase activity
J5V76_07435	COG0392	lysyltransferase activity
J5V76_07435	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
J5V76_07450	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V76_07455	COG1686	Belongs to the peptidase S11 family
J5V76_07460	COG2715	membrane protein required for spore maturation
J5V76_07465	COG0700	Nucleoside recognition
J5V76_07470	COG1187	pseudouridine synthase activity
J5V76_07480	COG1333	cytochrome c biogenesis protein
J5V76_07485	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V76_07490	COG0745	RESPONSE REGULATOR receiver
J5V76_07495	COG5002	protein histidine kinase activity
J5V76_07500	COG2096	Adenosyltransferase
J5V76_07505	COG4942	peptidase
J5V76_07515	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
J5V76_07520	COG1141	Ferredoxin
J5V76_07525	COG4955	Helix-turn-helix domain
J5V76_07530	COG0514	ATP-dependent DNA helicase (RecQ)
J5V76_07535	COG1266	CAAX protease self-immunity
J5V76_07545	COG1408	metallophosphoesterase
J5V76_07560	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5V76_07580	COG0492	ferredoxin-NADP+ reductase activity
J5V76_07585	COG0252	asparaginase activity
J5V76_07595	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J5V76_07605	COG1304	FMN binding
J5V76_07635	COG1160	GTP binding
J5V76_07640	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J5V76_07660	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V76_07670	COG0302	gtp cyclohydrolase
J5V76_07675	COG0142	geranyltranstransferase activity
J5V76_07680	COG2226	methyltransferase
J5V76_07685	COG0142	geranyltranstransferase activity
J5V76_07700	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J5V76_07710	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J5V76_07715	COG0457	Tetratricopeptide repeat
J5V76_07720	COG5582	Belongs to the UPF0302 family
J5V76_07735	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J5V76_07750	COG4347	Protein of unknown function (DUF1405)
J5V76_07765	COG2738	Putative neutral zinc metallopeptidase
J5V76_07775	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_07780	COG1694	Mazg nucleotide pyrophosphohydrolase
J5V76_07785	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J5V76_07790	COG1803	Methylglyoxal synthase
J5V76_07795	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V76_07800	COG0438	transferase activity, transferring glycosyl groups
J5V76_07805	COG0617	tRNA 3'-terminal CCA addition
J5V76_07815	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
J5V76_07820	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
J5V76_07830	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J5V76_07830	COG1199	ATP-dependent helicase activity
J5V76_07850	COG3935	DnaD domain protein
J5V76_07855	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J5V76_07865	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_07865	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V76_07870	COG3331	DNA recombination
J5V76_07905	COG4474	Belongs to the UPF0398 family
J5V76_07910	COG3599	regulation of cell shape
J5V76_07920	COG0116	Belongs to the methyltransferase superfamily
J5V76_07930	COG1199	ATP-dependent helicase activity
J5V76_07935	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J5V76_07945	COG0024	Methionine aminopeptidase
J5V76_07955	COG2233	PERMEase
J5V76_07960	COG2311	Membrane
J5V76_07970	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V76_07980	COG0456	acetyltransferase
J5V76_07990	COG2897	thiosulfate sulfurtransferase activity
J5V76_08030	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V76_08055	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J5V76_08070	COG1215	transferase activity, transferring glycosyl groups
J5V76_08075	COG0438	transferase activity, transferring glycosyl groups
J5V76_08090	COG0454	-acetyltransferase
J5V76_08110	COG0328	RNA-DNA hybrid ribonuclease activity
J5V76_08145	COG3403	YqcI/YcgG family
J5V76_08150	COG1280	lysine exporter protein (LysE YggA)
J5V76_08165	COG3162	membrane
J5V76_08175	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V76_08185	COG0475	glutathione-regulated potassium exporter activity
J5V76_08190	COG0789	Transcriptional regulator
J5V76_08190	COG4978	Transcriptional regulator
J5V76_08200	COG2323	membrane
J5V76_08205	COG1434	Gram-negative-bacterium-type cell wall biogenesis
J5V76_08250	COG1923	regulation of RNA biosynthetic process
J5V76_08260	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V76_08265	COG1360	Flagellar Motor Protein
J5V76_08270	COG2201	protein-glutamate methylesterase activity
J5V76_08275	COG2198	Histidine kinase
J5V76_08275	COG0643	Histidine kinase
J5V76_08280	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V76_08280	COG1776	CheC inhibitor of MCP methylation
J5V76_08295	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V76_08315	COG1256	bacterial-type flagellum assembly
J5V76_08320	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V76_08340	COG1815	bacterial-type flagellum-dependent cell motility
J5V76_08345	COG1558	bacterial-type flagellum-dependent cell motility
J5V76_08355	COG1766	The M ring may be actively involved in energy transduction
J5V76_08360	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V76_08370	COG1157	protein secretion by the type III secretion system
J5V76_08390	COG1749	Flagellar hook protein flgE
J5V76_08405	COG0835	chemotaxis
J5V76_08405	COG0784	Response regulator, receiver
J5V76_08425	COG0861	Integral membrane protein TerC family
J5V76_08435	COG3383	formate dehydrogenase (NAD+) activity
J5V76_08440	COG2427	Protein of unknown function (DUF1641)
J5V76_08445	COG5609	conserved protein (DUF2294)
J5V76_08450	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V76_08460	COG2116	formate transmembrane transporter activity
J5V76_08465	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V76_08470	COG0303	'Molybdopterin
J5V76_08475	COG0314	molybdopterin synthase activity
J5V76_08480	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
J5V76_08490	COG0489	protein tyrosine kinase activity
J5V76_08495	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V76_08500	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V76_08505	COG0741	lytic transglycosylase activity
J5V76_08515	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V76_08520	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V76_08520	COG1776	CheC inhibitor of MCP methylation
J5V76_08530	COG1338	Plays a role in the flagellum-specific transport system
J5V76_08535	COG1987	bacterial-type flagellum assembly
J5V76_08545	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V76_08550	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V76_08555	COG1419	protein localization to endoplasmic reticulum
J5V76_08560	COG4786	Flagellar basal body rod
J5V76_08565	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V76_08605	COG2329	Antibiotic biosynthesis monooxygenase
J5V76_08620	COG2814	Major facilitator Superfamily
J5V76_08630	COG0583	DNA-binding transcription factor activity
J5V76_08635	COG3842	ATPase activity
J5V76_08685	COG0406	alpha-ribazole phosphatase activity
J5V76_08715	COG0367	asparagine synthase
J5V76_08745	COG1802	Transcriptional regulator
J5V76_08750	COG0697	spore germination
J5V76_08765	COG1216	Glycosyl transferase, family 2
J5V76_08765	COG0438	transferase activity, transferring glycosyl groups
J5V76_08770	COG1757	Na H antiporter
J5V76_08790	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_08805	COG0534	Mate efflux family protein
J5V76_08810	COG3340	Belongs to the peptidase S51 family
J5V76_08830	COG0785	Cytochrome C biogenesis protein
J5V76_08835	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_08850	COG3048	D-serine ammonia-lyase activity
J5V76_08855	COG2733	membrane
J5V76_08890	COG1131	(ABC) transporter
J5V76_08905	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V76_08910	COG0528	UMP kinase activity
J5V76_08920	COG1027	Aspartate ammonia-lyase
J5V76_08925	COG0281	malic enzyme
J5V76_08930	COG4191	Histidine kinase
J5V76_08935	COG0784	Response regulator, receiver
J5V76_08940	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V76_08950	COG2502	aspartate--ammonia ligase
J5V76_08955	COG3620	sequence-specific DNA binding
J5V76_08985	COG1051	belongs to the nudix hydrolase family
J5V76_08990	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_09000	COG2814	Major facilitator Superfamily
J5V76_09025	COG1695	Transcriptional regulator
J5V76_09040	COG0477	Major facilitator Superfamily
J5V76_09055	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V76_09060	COG2223	nitrite transmembrane transporter activity
J5V76_09065	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V76_09080	COG2244	polysaccharide biosynthetic process
J5V76_09085	COG0733	neurotransmitter:sodium symporter activity
J5V76_09095	COG5566	PFAM Mor transcription activator
J5V76_09100	COG2323	membrane
J5V76_09120	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V76_09125	COG2132	Multicopper oxidase
J5V76_09135	COG5002	protein histidine kinase activity
J5V76_09140	COG0745	RESPONSE REGULATOR receiver
J5V76_09150	COG0129	dihydroxy-acid dehydratase activity
J5V76_09155	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J5V76_09180	COG2814	Major facilitator Superfamily
J5V76_09185	COG3384	dioxygenase
J5V76_09230	COG4166	transmembrane transport
J5V76_09235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_09255	COG1914	H( )-stimulated, divalent metal cation uptake system
J5V76_09260	COG1054	Belongs to the UPF0176 family
J5V76_09270	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V76_09275	COG0531	amino acid
J5V76_09300	COG2390	Transcriptional regulator
J5V76_09310	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J5V76_09315	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_09320	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
J5V76_09325	COG0295	cytidine deaminase activity
J5V76_09335	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V76_09355	COG0583	DNA-binding transcription factor activity
J5V76_09375	COG2132	Multicopper oxidase
J5V76_09385	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V76_09395	COG0583	DNA-binding transcription factor activity
J5V76_09415	COG1114	Component of the transport system for branched-chain amino acids
J5V76_09435	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_09445	COG1276	copper resistance
J5V76_09445	COG2372	response to copper ion
J5V76_09450	COG4549	nuclear export factor GLE1
J5V76_09460	COG0697	spore germination
J5V76_09465	COG0583	DNA-binding transcription factor activity
J5V76_09470	COG1959	2 iron, 2 sulfur cluster binding
J5V76_09475	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5V76_09480	COG0778	Nitroreductase
J5V76_09490	COG0628	permease
J5V76_09505	COG1231	oxidoreductase activity
J5V76_09510	COG0523	cobalamin synthesis protein
J5V76_09520	COG0411	ABC transporter
J5V76_09540	COG0583	DNA-binding transcription factor activity
J5V76_09550	COG1942	4-Oxalocrotonate Tautomerase
J5V76_09565	COG0346	lactoylglutathione lyase activity
J5V76_09575	COG1271	oxidase subunit
J5V76_09580	COG1294	oxidase, subunit
J5V76_09585	COG4988	ABC transporter
J5V76_09590	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J5V76_09620	COG1686	Belongs to the peptidase S11 family
J5V76_09635	COG0791	NLP P60 protein
J5V76_09635	COG1388	LysM domain
J5V76_09645	COG1132	(ABC) transporter
J5V76_09650	COG0745	RESPONSE REGULATOR receiver
J5V76_09655	COG5002	protein histidine kinase activity
J5V76_09660	COG0300	oxidoreductase activity
J5V76_09665	COG4122	O-methyltransferase activity
J5V76_09695	COG0460	homoserine dehydrogenase
J5V76_09705	COG0083	homoserine kinase activity
J5V76_09720	COG1316	TRANSCRIPTIONal
J5V76_09735	COG1285	pathogenesis
J5V76_09740	COG1247	-acetyltransferase
J5V76_09760	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V76_09770	COG1082	Xylose isomerase domain protein TIM barrel
J5V76_09780	COG2814	Major facilitator Superfamily
J5V76_09785	COG1279	arginine transmembrane transporter activity
J5V76_09790	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_09800	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V76_09830	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J5V76_09835	COG0577	efflux transmembrane transporter activity
J5V76_09840	COG2002	toxin-antitoxin pair type II binding
J5V76_09845	COG1404	Belongs to the peptidase S8 family
J5V76_09850	COG0640	Transcriptional regulator
J5V76_09855	COG0667	Aldo Keto reductase
J5V76_09860	COG2814	Major facilitator Superfamily
J5V76_09900	COG3949	Membrane
J5V76_09905	COG0783	Belongs to the Dps family
J5V76_09920	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V76_09930	COG1231	oxidoreductase activity
J5V76_09935	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_09940	COG4989	oxidoreductase activity
J5V76_09945	COG0523	cobalamin synthesis protein
J5V76_09950	COG0456	acetyltransferase
J5V76_09955	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5V76_09975	COG1136	(ABC) transporter
J5V76_09980	COG0577	efflux transmembrane transporter activity
J5V76_09995	COG1902	pentaerythritol trinitrate reductase activity
J5V76_10000	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V76_10010	COG4166	transmembrane transport
J5V76_10015	COG0346	lactoylglutathione lyase activity
J5V76_10025	COG0406	alpha-ribazole phosphatase activity
J5V76_10035	COG5337	Spore coat protein CotH
J5V76_10040	COG1051	belongs to the nudix hydrolase family
J5V76_10045	COG0586	Pfam SNARE associated Golgi protein
J5V76_10050	COG2244	polysaccharide biosynthetic process
J5V76_10060	COG0701	Predicted permease
J5V76_10065	COG3689	TIGRFAM TIGR03943 family protein
J5V76_10070	COG1607	acyl-coa hydrolase
J5V76_10095	COG0702	epimerase
J5V76_10100	COG2839	Protein conserved in bacteria
J5V76_10105	COG1253	flavin adenine dinucleotide binding
J5V76_10130	COG1114	Component of the transport system for branched-chain amino acids
J5V76_10135	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V76_10150	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_10160	COG1876	peptidase activity
J5V76_10165	COG0494	nUDIX hydrolase
J5V76_10185	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_10195	COG0561	phosphatase activity
J5V76_10200	COG1846	Transcriptional regulator
J5V76_10205	COG2814	Major facilitator Superfamily
J5V76_10215	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5V76_10220	COG4106	trans-aconitate 2-methyltransferase activity
J5V76_10240	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_10245	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_10270	COG0456	acetyltransferase
J5V76_10310	COG4974	Belongs to the 'phage' integrase family
J5V76_10410	COG3874	Sporulation protein YtfJ
J5V76_10435	COG2226	methyltransferase
J5V76_10465	COG0604	alcohol dehydrogenase
J5V76_10470	COG1595	DNA-templated transcription, initiation
J5V76_10490	COG0426	domain, Protein
J5V76_10490	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V76_10500	COG0386	Belongs to the glutathione peroxidase family
J5V76_10505	COG1305	Transglutaminase-like
J5V76_10510	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
J5V76_10515	COG0714	Associated with various cellular activities
J5V76_10520	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
J5V76_10525	COG1140	nitrate reductase beta subunit
J5V76_10530	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
J5V76_10535	COG2181	nitrate reductase activity
J5V76_10540	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V76_10545	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5V76_10550	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V76_10555	COG0303	'Molybdopterin
J5V76_10560	COG0314	molybdopterin synthase activity
J5V76_10570	COG2223	nitrite transmembrane transporter activity
J5V76_10590	COG1648	precorrin-2 dehydrogenase activity
J5V76_10600	COG1587	Uroporphyrinogen-III synthase
J5V76_10600	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J5V76_10605	COG2146	nitrite reductase [NAD(P)H] activity
J5V76_10610	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J5V76_10615	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
J5V76_10645	COG2359	stage V sporulation protein S
J5V76_10655	COG1418	mRNA catabolic process
J5V76_10660	COG0488	(ABC) transporter
J5V76_10690	COG1413	lyase activity
J5V76_10705	COG2521	methyltransferase
J5V76_10705	COG2136	Putative SAM-dependent methyltransferase
J5V76_10710	COG0018	arginyl-trna synthetase
J5V76_10760	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J5V76_10765	COG0017	Asparaginyl-tRNA synthetase
J5V76_10770	COG0733	neurotransmitter:sodium symporter activity
J5V76_10795	COG2610	gluconate transmembrane transporter activity
J5V76_10805	COG1794	racemase activity, acting on amino acids and derivatives
J5V76_10815	COG0456	acetyltransferase
J5V76_10820	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
J5V76_10825	COG1131	(ABC) transporter
J5V76_10830	COG4473	ABC transporter
J5V76_10840	COG0546	phosphoglycolate phosphatase activity
J5V76_10880	COG0768	penicillin binding
J5V76_10895	COG1272	protein, Hemolysin III
J5V76_10900	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J5V76_10905	COG0805	protein transport
J5V76_10915	COG1307	EDD domain protein, DegV family
J5V76_10920	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V76_10925	COG1999	signal sequence binding
J5V76_10930	COG0071	Belongs to the small heat shock protein (HSP20) family
J5V76_10935	COG0367	asparagine synthase
J5V76_10950	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V76_10955	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_10960	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V76_10980	COG1335	isochorismatase
J5V76_10990	COG0668	transmembrane transport
J5V76_10995	COG4585	Histidine kinase
J5V76_10995	COG2203	Gaf domain
J5V76_11000	COG2197	response regulator
J5V76_11005	COG1737	Transcriptional regulator
J5V76_11010	COG1064	alcohol dehydrogenase
J5V76_11030	COG1070	Carbohydrate kinase
J5V76_11040	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
J5V76_11060	COG0517	IMP dehydrogenase activity
J5V76_11060	COG1125	glycine betaine transport
J5V76_11065	COG1174	glycine betaine transport
J5V76_11100	COG1253	flavin adenine dinucleotide binding
J5V76_11105	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_11110	COG5506	Protein of unknown function (DUF1694)
J5V76_11125	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V76_11130	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
J5V76_11135	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
J5V76_11140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V76_11145	COG0456	acetyltransferase
J5V76_11150	COG3829	transcription factor binding
J5V76_11155	COG1509	lysine 2,3-aminomutase activity
J5V76_11165	COG4479	Belongs to the UPF0346 family
J5V76_11190	COG0515	serine threonine protein kinase
J5V76_11190	COG3064	Membrane
J5V76_11190	COG4991	sh3 domain protein
J5V76_11200	COG0671	phosphoesterase, PA-phosphatase related
J5V76_11205	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V76_11210	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_11280	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V76_11305	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_11325	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_11325	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V76_11335	COG2814	Major facilitator Superfamily
J5V76_11345	COG0372	Belongs to the citrate synthase family
J5V76_11350	COG2079	MmgE PrpD family protein
J5V76_11355	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
J5V76_11360	COG1960	acyl-CoA dehydrogenase activity
J5V76_11365	COG2084	Dehydrogenase
J5V76_11370	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_11375	COG1280	lysine exporter protein (LysE YggA)
J5V76_11380	COG1024	Enoyl-CoA hydratase
J5V76_11395	COG0420	3'-5' exonuclease activity
J5V76_11420	COG2223	nitrite transmembrane transporter activity
J5V76_11425	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_11430	COG1169	isochorismate synthase
J5V76_11435	COG1021	2,3-dihydroxybenzoate-AMP ligase
J5V76_11440	COG1535	isochorismatase
J5V76_11440	COG3433	isochorismatase activity
J5V76_11445	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5V76_11450	COG3251	PFAM MbtH domain protein
J5V76_11455	COG2814	Major facilitator Superfamily
J5V76_11470	COG0776	regulation of translation
J5V76_11480	COG2318	DinB family
J5V76_11485	COG1115	amino acid carrier protein
J5V76_11500	COG2329	Antibiotic biosynthesis monooxygenase
J5V76_11510	COG1187	pseudouridine synthase activity
J5V76_11515	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V76_11520	COG3655	Transcriptional regulator
J5V76_11530	COG1136	(ABC) transporter
J5V76_11540	COG2814	Major facilitator Superfamily
J5V76_11555	COG0028	Belongs to the TPP enzyme family
J5V76_11575	COG1253	flavin adenine dinucleotide binding
J5V76_11610	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V76_11630	COG1846	Transcriptional regulator
J5V76_11640	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_11645	COG1309	transcriptional regulator
J5V76_11675	COG1247	-acetyltransferase
J5V76_11690	COG1132	(ABC) transporter
J5V76_11700	COG1309	transcriptional regulator
J5V76_11705	COG2357	RelA SpoT domain protein
J5V76_11710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_11740	COG0596	Alpha beta hydrolase
J5V76_11745	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V76_11785	COG0583	DNA-binding transcription factor activity
J5V76_11790	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V76_11840	COG0583	DNA-binding transcription factor activity
J5V76_11845	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V76_11850	COG2258	MOSC domain
J5V76_11865	COG1132	(ABC) transporter
J5V76_11870	COG1132	(ABC) transporter
J5V76_11880	COG1396	sequence-specific DNA binding
J5V76_11905	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5V76_11915	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
J5V76_11920	COG1595	DNA-templated transcription, initiation
J5V76_11945	COG1649	PFAM Uncharacterised BCR, COG1649
J5V76_11965	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
J5V76_11970	COG2971	BadF BadG BcrA BcrD
J5V76_12020	COG1309	transcriptional regulator
J5V76_12035	COG1136	(ABC) transporter
J5V76_12035	COG0577	efflux transmembrane transporter activity
J5V76_12040	COG3615	Tellurite resistance protein tehB
J5V76_12040	COG0500	methyltransferase
J5V76_12055	COG0588	phosphoglycerate mutase activity
J5V76_12075	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V76_12085	COG0110	maltose O-acetyltransferase activity
J5V76_12090	COG1136	(ABC) transporter
J5V76_12115	COG1686	Belongs to the peptidase S11 family
J5V76_12140	COG0768	penicillin binding
J5V76_12150	COG2205	protein histidine kinase activity
J5V76_12155	COG1136	(ABC) transporter
J5V76_12160	COG0577	efflux transmembrane transporter activity
J5V76_12170	COG1595	DNA-templated transcription, initiation
J5V76_12180	COG0768	penicillin binding
J5V76_12185	COG0768	penicillin binding
J5V76_12220	COG1252	NADH dehydrogenase
J5V76_12225	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_12225	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_12270	COG3397	chitin binding
J5V76_12275	COG0823	Involved in the tonB-independent uptake of proteins
J5V76_12285	COG1408	metallophosphoesterase
J5V76_12295	COG1131	(ABC) transporter
J5V76_12305	COG1309	transcriptional regulator
J5V76_12315	COG1960	acyl-CoA dehydrogenase activity
J5V76_12320	COG0439	Biotin carboxylase
J5V76_12325	COG0511	ligase activity, forming carbon-carbon bonds
J5V76_12330	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V76_12335	COG1024	Enoyl-CoA hydratase
J5V76_12340	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J5V76_12345	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V76_12390	COG0572	uridine kinase
J5V76_12425	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V76_12455	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V76_12480	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_12485	COG1733	regulation of RNA biosynthetic process
J5V76_12510	COG1309	transcriptional regulator
J5V76_12540	COG0697	spore germination
J5V76_12545	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_12575	COG2323	membrane
J5V76_12580	COG2132	Multicopper oxidase
J5V76_12595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_12600	COG0697	spore germination
J5V76_12605	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V76_12610	COG0201	protein transport
J5V76_12620	COG0737	Belongs to the 5'-nucleotidase family
J5V76_12625	COG3227	Zinc metalloprotease (Elastase)
J5V76_12630	COG1523	belongs to the glycosyl hydrolase 13 family
J5V76_12645	COG0076	glutamate decarboxylase activity
J5V76_12650	COG0657	acetylesterase activity
J5V76_12665	COG0577	efflux transmembrane transporter activity
J5V76_12670	COG1136	(ABC) transporter
J5V76_12690	COG0745	RESPONSE REGULATOR receiver
J5V76_12720	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V76_12725	COG1183	phosphatidylcholine synthase activity
J5V76_12735	COG1132	(ABC) transporter
J5V76_12740	COG3961	Belongs to the TPP enzyme family
J5V76_12760	COG0322	excinuclease ABC activity
J5V76_12785	COG2318	DinB family
J5V76_12800	COG4667	esterase of the alpha-beta hydrolase superfamily
J5V76_12850	COG0592	DNA-directed DNA polymerase activity
J5V76_12855	COG2816	NAD+ diphosphatase activity
J5V76_12865	COG2223	nitrite transmembrane transporter activity
J5V76_12875	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_12885	COG0494	nUDIX hydrolase
J5V76_12905	COG0697	spore germination
J5V76_12910	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_12935	COG1733	regulation of RNA biosynthetic process
J5V76_12955	COG1132	(ABC) transporter
J5V76_12955	COG2375	cellular response to nickel ion
J5V76_12960	COG1132	(ABC) transporter
J5V76_12990	COG0768	penicillin binding
J5V76_12995	COG0671	phosphoesterase, PA-phosphatase related
J5V76_13000	COG0604	alcohol dehydrogenase
J5V76_13005	COG5002	protein histidine kinase activity
J5V76_13010	COG0745	RESPONSE REGULATOR receiver
J5V76_13020	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V76_13050	COG4720	Psort location CytoplasmicMembrane, score
J5V76_13055	COG1794	racemase activity, acting on amino acids and derivatives
J5V76_13080	COG0561	phosphatase activity
J5V76_13125	COG2124	cytochrome p450
J5V76_13170	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V76_13180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_13185	COG0460	homoserine dehydrogenase
J5V76_13205	COG0577	efflux transmembrane transporter activity
J5V76_13210	COG1136	(ABC) transporter
J5V76_13225	COG0488	(ABC) transporter
J5V76_13230	COG0667	Aldo Keto reductase
J5V76_13235	COG0583	DNA-binding transcription factor activity
J5V76_13250	COG2205	protein histidine kinase activity
J5V76_13255	COG0745	RESPONSE REGULATOR receiver
J5V76_13265	COG3773	Cell wall hydrolase
J5V76_13270	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
J5V76_13280	COG3386	PFAM SMP-30 Gluconolaconase
J5V76_13290	COG0604	alcohol dehydrogenase
J5V76_13340	COG2959	enzyme of heme biosynthesis
J5V76_13365	COG3483	tryptophan 2,3-dioxygenase activity
J5V76_13370	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
J5V76_13375	COG3844	kynureninase activity
J5V76_13380	COG1309	transcriptional regulator
J5V76_13395	COG3284	Transcriptional regulator
J5V76_13410	COG1349	DNA-binding transcription factor activity
J5V76_13430	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V76_13435	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V76_13440	COG0022	dehydrogenase e1 component
J5V76_13445	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V76_13455	COG2223	nitrite transmembrane transporter activity
J5V76_13465	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_13470	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V76_13470	COG0456	acetyltransferase
J5V76_13505	COG4176	ABC-type proline glycine betaine transport system permease component
J5V76_13510	COG4175	Glycine betaine
J5V76_13510	COG0517	IMP dehydrogenase activity
J5V76_13535	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
J5V76_13540	COG2153	protein acetylation
J5V76_13545	COG3397	chitin binding
J5V76_13555	COG1819	glycosyl
J5V76_13570	COG2205	protein histidine kinase activity
J5V76_13575	COG2315	Protein conserved in bacteria
J5V76_13620	COG3973	AAA domain
J5V76_13630	COG2105	PFAM AIG2 family protein
J5V76_13635	COG0514	ATP-dependent DNA helicase (RecQ)
J5V76_13660	COG4637	Psort location Cytoplasmic, score
J5V76_13670	COG1227	inorganic diphosphatase activity
J5V76_13675	COG3397	chitin binding
J5V76_13685	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V76_13690	COG1115	amino acid carrier protein
J5V76_13695	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_13700	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J5V76_13710	COG3938	Belongs to the proline racemase family
J5V76_13715	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V76_13755	COG0586	Pfam SNARE associated Golgi protein
J5V76_13770	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V76_13775	COG4166	transmembrane transport
J5V76_13785	COG4948	Mandelate Racemase Muconate Lactonizing
J5V76_13805	COG0667	Aldo Keto reductase
J5V76_13850	COG2936	dipeptidyl-peptidase activity
J5V76_13860	COG0745	RESPONSE REGULATOR receiver
J5V76_13880	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V76_13910	COG1307	EDD domain protein, DegV family
J5V76_13965	COG2814	Major facilitator Superfamily
J5V76_13975	COG1664	Polymer-forming cytoskeletal
J5V76_13980	COG0789	Transcriptional regulator
J5V76_13985	COG4533	DNA binding
J5V76_13990	COG0477	Major facilitator Superfamily
J5V76_13990	COG2814	Major facilitator Superfamily
J5V76_14010	COG2261	transglycosylase associated protein
J5V76_14025	COG2226	methyltransferase
J5V76_14060	COG0436	Aminotransferase
J5V76_14065	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J5V76_14090	COG1131	(ABC) transporter
J5V76_14095	COG2188	Transcriptional regulator
J5V76_14135	COG0628	permease
J5V76_14145	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V76_14180	COG2746	aminoglycoside 3-N-acetyltransferase activity
J5V76_14190	COG0697	spore germination
J5V76_14195	COG2318	DinB family
J5V76_14245	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V76_14255	COG2814	Major facilitator Superfamily
J5V76_14260	COG1368	sulfuric ester hydrolase activity
J5V76_14275	COG0488	(ABC) transporter
J5V76_14280	COG1033	growth of symbiont in host cell
J5V76_14280	COG2409	Drug exporters of the RND superfamily
J5V76_14285	COG1309	transcriptional regulator
J5V76_14305	COG0287	Prephenate dehydrogenase
J5V76_14320	COG1605	Chorismate mutase
J5V76_14320	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J5V76_14345	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
J5V76_14360	COG3584	3D domain protein
J5V76_14360	COG1388	LysM domain
J5V76_14370	COG0346	lactoylglutathione lyase activity
J5V76_14380	COG0431	NADPH-dependent FMN reductase
J5V76_14410	COG0579	oxidoreductase
J5V76_14415	COG1879	ABC-type sugar transport system periplasmic component
J5V76_14425	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V76_14430	COG1129	ABC transporter
J5V76_14435	COG2390	Transcriptional regulator
J5V76_14455	COG2226	methyltransferase
J5V76_14470	COG0346	lactoylglutathione lyase activity
J5V76_14475	COG2329	Antibiotic biosynthesis monooxygenase
J5V76_14495	COG1472	Belongs to the glycosyl hydrolase 3 family
J5V76_14505	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_14510	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J5V76_14515	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J5V76_14520	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V76_14525	COG3239	Fatty acid desaturase
J5V76_14585	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_14590	COG0346	lactoylglutathione lyase activity
J5V76_14610	COG0714	Associated with various cellular activities
J5V76_14630	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5V76_14635	COG0753	catalase activity
J5V76_14655	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J5V76_14675	COG0778	Nitroreductase
J5V76_14680	COG1846	Transcriptional regulator
J5V76_14695	COG1051	belongs to the nudix hydrolase family
J5V76_14700	COG4884	unkown
J5V76_14700	COG3831	ATPase activity
J5V76_14720	COG2207	Transcriptional regulator
J5V76_14725	COG0456	acetyltransferase
J5V76_14745	COG0697	spore germination
J5V76_14750	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_14760	COG1671	Belongs to the UPF0178 family
J5V76_14790	COG0456	acetyltransferase
J5V76_14790	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V76_14815	COG0730	response to heat
J5V76_14825	COG0833	amino acid
J5V76_14835	COG4335	DNA alkylation repair
J5V76_14860	COG0681	Belongs to the peptidase S26 family
J5V76_14865	COG0768	penicillin binding
J5V76_14875	COG3104	oligopeptide transport
J5V76_14880	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
J5V76_14895	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
J5V76_14900	COG1984	allophanate hydrolase subunit 2
J5V76_14905	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
J5V76_14910	COG1414	Transcriptional regulator
J5V76_14940	COG1960	acyl-CoA dehydrogenase activity
J5V76_14955	COG0346	lactoylglutathione lyase activity
J5V76_14965	COG0640	Transcriptional regulator
J5V76_14970	COG3314	Sporulation integral membrane protein YlbJ
J5V76_14990	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J5V76_15005	COG0574	Belongs to the PEP-utilizing enzyme family
J5V76_15005	COG3848	Pyruvate phosphate dikinase
J5V76_15015	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V76_15020	COG1876	peptidase activity
J5V76_15030	COG5002	protein histidine kinase activity
J5V76_15035	COG0745	RESPONSE REGULATOR receiver
J5V76_15040	COG4990	cell redox homeostasis
J5V76_15065	COG5002	protein histidine kinase activity
J5V76_15070	COG0745	RESPONSE REGULATOR receiver
J5V76_15080	COG1575	Belongs to the MenA family. Type 1 subfamily
J5V76_15095	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5V76_15100	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J5V76_15105	COG1121	(ABC) transporter
J5V76_15130	COG3320	Male sterility
J5V76_15130	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V76_15135	COG1309	transcriptional regulator
J5V76_15140	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_15145	COG1522	sequence-specific DNA binding
J5V76_15160	COG0346	lactoylglutathione lyase activity
J5V76_15185	COG2226	methyltransferase
J5V76_15195	COG2814	Major facilitator Superfamily
J5V76_15230	COG0745	RESPONSE REGULATOR receiver
J5V76_15235	COG3850	Histidine kinase
J5V76_15235	COG5002	protein histidine kinase activity
J5V76_15265	COG2515	1-aminocyclopropane-1-carboxylate deaminase
J5V76_15275	COG2309	aminopeptidase activity
J5V76_15285	COG1690	Belongs to the RtcB family
J5V76_15295	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
J5V76_15315	COG1136	(ABC) transporter
J5V76_15320	COG0577	efflux transmembrane transporter activity
J5V76_15340	COG3850	Histidine kinase
J5V76_15340	COG5002	protein histidine kinase activity
J5V76_15355	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_15370	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V76_15390	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J5V76_15420	COG5444	nuclease activity
J5V76_15465	COG2814	Major facilitator Superfamily
J5V76_15505	COG0477	Major facilitator Superfamily
J5V76_15520	COG1846	Transcriptional regulator
J5V76_15525	COG2814	Major facilitator Superfamily
J5V76_15570	COG0789	Transcriptional regulator
J5V76_15605	COG1476	TRANSCRIPTIONal
J5V76_15620	COG1288	antiporter activity
J5V76_15625	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J5V76_15670	COG3718	enzyme involved in inositol metabolism
J5V76_15675	COG0191	fructose-bisphosphate aldolase activity
J5V76_15700	COG0673	inositol 2-dehydrogenase activity
J5V76_15705	COG2814	Major facilitator Superfamily
J5V76_15710	COG1609	Transcriptional regulator
J5V76_15745	COG2002	toxin-antitoxin pair type II binding
J5V76_15765	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_15775	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_15825	COG4187	Peptidase family M20/M25/M40
J5V76_15835	COG2890	protein-(glutamine-N5) methyltransferase activity
J5V76_15850	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V76_15890	COG1122	ATPase activity
J5V76_15915	COG1288	antiporter activity
J5V76_15920	COG2356	endonuclease I
J5V76_15925	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V76_15930	COG3620	sequence-specific DNA binding
J5V76_15940	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J5V76_15960	COG1785	Belongs to the alkaline phosphatase family
J5V76_15965	COG0778	Nitroreductase
J5V76_15970	COG1733	regulation of RNA biosynthetic process
J5V76_15990	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_16000	COG1131	(ABC) transporter
J5V76_16030	COG1595	DNA-templated transcription, initiation
J5V76_16045	COG1011	Hydrolase
J5V76_16050	COG2365	Tyrosine phosphatase family
J5V76_16075	COG0577	efflux transmembrane transporter activity
J5V76_16075	COG1136	(ABC) transporter
J5V76_16095	COG0628	permease
J5V76_16100	COG2261	transglycosylase associated protein
J5V76_16140	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
J5V76_16150	COG1253	flavin adenine dinucleotide binding
J5V76_16155	COG0789	Transcriptional regulator
J5V76_16160	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J5V76_16185	COG0697	spore germination
J5V76_16195	COG1357	PFAM Pentapeptide repeats (8 copies)
J5V76_16200	COG3813	Protein conserved in bacteria
J5V76_16205	COG2706	6-phosphogluconolactonase activity
J5V76_16210	COG1070	Carbohydrate kinase
J5V76_16220	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
J5V76_16225	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
J5V76_16230	COG4702	Belongs to the UPF0303 family
J5V76_16240	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_16260	COG0384	phenazine biosynthesis protein PhzF
J5V76_16280	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_16285	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V76_16290	COG1733	regulation of RNA biosynthetic process
J5V76_16305	COG1191	sigma factor activity
J5V76_16320	COG1876	peptidase activity
J5V76_16360	COG0741	lytic transglycosylase activity
J5V76_16430	COG1522	sequence-specific DNA binding
J5V76_16435	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V76_16440	COG0657	acetylesterase activity
J5V76_16450	COG2814	Major facilitator Superfamily
J5V76_16455	COG1309	transcriptional regulator
J5V76_16485	COG0814	amino acid
J5V76_16510	COG1151	hydroxylamine reductase activity
J5V76_16545	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_16555	COG2072	flavoprotein involved in K transport
J5V76_16600	COG1695	Transcriptional regulator
J5V76_16605	COG0604	alcohol dehydrogenase
J5V76_16610	COG1113	amino acid transport
J5V76_16620	COG2814	Major facilitator Superfamily
J5V76_16630	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V76_16635	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_16645	COG0534	Mate efflux family protein
J5V76_16650	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_16655	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V76_16670	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V76_16675	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V76_16695	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_16700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_16705	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_16710	COG3739	integral membrane protein
J5V76_16730	COG0583	DNA-binding transcription factor activity
J5V76_16755	COG1193	negative regulation of DNA recombination
J5V76_16775	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V76_16780	COG1164	Oligoendopeptidase f
J5V76_16820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_16880	COG0640	Transcriptional regulator
J5V76_16885	COG0604	alcohol dehydrogenase
J5V76_16890	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
J5V76_16905	COG2808	Putative FMN-binding domain
J5V76_16910	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V76_16920	COG0277	FAD linked oxidase domain protein
J5V76_16940	COG1285	pathogenesis
J5V76_16950	COG2514	catechol 2,3-dioxygenase activity
J5V76_16955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_16960	COG1126	abc transporter atp-binding protein
J5V76_16965	COG0765	amino acid transport
J5V76_16970	COG2720	vancomycin resistance protein
J5V76_16995	COG1278	Cold shock
J5V76_17005	COG0716	FMN binding
J5V76_17015	COG0494	nUDIX hydrolase
J5V76_17035	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_17045	COG0165	Argininosuccinate lyase
J5V76_17060	COG4145	pantothenate transmembrane transporter activity
J5V76_17070	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_17075	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_17085	COG1657	PFAM Prenyltransferase squalene oxidase
J5V76_17090	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
J5V76_17095	COG2962	Rard protein
J5V76_17100	COG3326	Membrane
J5V76_17105	COG0531	amino acid
J5V76_17140	COG2226	methyltransferase
J5V76_17145	COG4166	transmembrane transport
J5V76_17150	COG4166	transmembrane transport
J5V76_17155	COG4166	transmembrane transport
J5V76_17165	COG1131	(ABC) transporter
J5V76_17185	COG0673	inositol 2-dehydrogenase activity
J5V76_17190	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V76_17195	COG0187	DNA topoisomerase II activity
J5V76_17200	COG1832	CoA-binding protein
J5V76_17205	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V76_17210	COG0745	RESPONSE REGULATOR receiver
J5V76_17220	COG1328	CTP reductase activity
J5V76_17220	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5V76_17230	COG4841	protein insertion into membrane
J5V76_17235	COG0824	Thioesterase
J5V76_17260	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_17280	COG2274	protein secretion by the type I secretion system
J5V76_17285	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
J5V76_17315	COG2211	Major facilitator Superfamily
J5V76_17325	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V76_17340	COG0183	Belongs to the thiolase family
J5V76_17345	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_17350	COG1268	BioY protein
J5V76_17355	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_17360	COG1396	sequence-specific DNA binding
J5V76_17400	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_17410	COG5002	protein histidine kinase activity
J5V76_17420	COG0400	carboxylic ester hydrolase activity
J5V76_17425	COG0346	lactoylglutathione lyase activity
J5V76_17430	COG0069	glutamate synthase activity
J5V76_17435	COG1902	pentaerythritol trinitrate reductase activity
J5V76_17445	COG1329	Transcriptional regulator
J5V76_17450	COG0010	Belongs to the arginase family
J5V76_17460	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
J5V76_17465	COG2986	histidine ammonia-lyase
J5V76_17475	COG2226	methyltransferase
J5V76_17500	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V76_17505	COG0785	Cytochrome C biogenesis protein
J5V76_17515	COG1473	amidohydrolase
J5V76_17520	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V76_17525	COG1131	(ABC) transporter
J5V76_17535	COG0583	DNA-binding transcription factor activity
J5V76_17545	COG1346	cytolysis
J5V76_17560	COG0730	response to heat
J5V76_17570	COG3409	Peptidoglycan-binding domain 1 protein
J5V76_17570	COG5632	N-Acetylmuramoyl-L-alanine amidase
J5V76_17590	COG1132	(ABC) transporter
J5V76_17595	COG1132	(ABC) transporter
J5V76_17600	COG3763	UPF0154 protein
J5V76_17620	COG3639	organic phosphonate transmembrane transporter activity
J5V76_17630	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_17635	COG0737	Belongs to the 5'-nucleotidase family
J5V76_17645	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J5V76_17650	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J5V76_17665	COG1695	Transcriptional regulator
J5V76_17670	COG0174	glutamine synthetase
J5V76_17675	COG0789	Transcriptional regulator
J5V76_17680	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
J5V76_17685	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V76_17690	COG2860	membrane
J5V76_17700	COG0464	growth
J5V76_17720	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J5V76_17730	COG1388	LysM domain
J5V76_17730	COG3584	3D domain protein
J5V76_17735	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V76_17735	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V76_17735	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V76_17740	COG1105	Belongs to the carbohydrate kinase PfkB family
J5V76_17745	COG1349	DNA-binding transcription factor activity
J5V76_17750	COG1979	alcohol dehydrogenase
J5V76_17755	COG2322	membrane
J5V76_17765	COG1113	amino acid transport
J5V76_17775	COG1473	amidohydrolase
J5V76_17780	COG1408	metallophosphoesterase
J5V76_17785	COG2116	formate transmembrane transporter activity
J5V76_17800	COG2217	Heavy metal translocating P-type atpase
J5V76_17805	COG2608	mercury ion transmembrane transporter activity
J5V76_17810	COG1937	Protein conserved in bacteria
J5V76_17830	COG2819	hydrolase of the alpha beta superfamily
J5V76_17835	COG1120	ATPase activity
J5V76_17840	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_17845	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_17850	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_17855	COG0708	Exodeoxyribonuclease III
J5V76_17860	COG2169	Transcriptional regulator
J5V76_17865	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V76_17870	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V76_17875	COG2706	6-phosphogluconolactonase activity
J5V76_17880	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V76_17885	COG2364	Membrane
J5V76_17895	COG0346	lactoylglutathione lyase activity
J5V76_17900	COG3300	MHYT domain
J5V76_17900	COG5001	Diguanylate cyclase
J5V76_17940	COG1346	cytolysis
J5V76_17950	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V76_17955	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V76_17955	COG0596	Alpha beta hydrolase
J5V76_17960	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V76_17970	COG2188	Transcriptional regulator
J5V76_17975	COG2723	6-phospho-beta-galactosidase activity
J5V76_17985	COG3773	Cell wall hydrolase
J5V76_17995	COG1368	sulfuric ester hydrolase activity
J5V76_18000	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V76_18005	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
J5V76_18010	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J5V76_18015	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J5V76_18025	COG4550	Control of competence regulator ComK, YlbF/YmcA
J5V76_18030	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V76_18035	COG1013	pyruvate-flavodoxin oxidoreductase activity
J5V76_18040	COG0674	pyruvate-flavodoxin oxidoreductase activity
J5V76_18040	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J5V76_18050	COG2359	stage V sporulation protein S
J5V76_18055	COG1692	metallophosphoesterase
J5V76_18060	COG1418	mRNA catabolic process
J5V76_18065	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
J5V76_18070	COG1058	Belongs to the CinA family
J5V76_18070	COG1546	Belongs to the CinA family
J5V76_18075	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J5V76_18080	COG1426	Protein conserved in bacteria
J5V76_18095	COG0300	oxidoreductase activity
J5V76_18100	COG0612	Peptidase, M16
J5V76_18105	COG0612	Peptidase, M16
J5V76_18110	COG1079	Belongs to the binding-protein-dependent transport system permease family
J5V76_18115	COG4603	Belongs to the binding-protein-dependent transport system permease family
J5V76_18120	COG3845	ABC transporter
J5V76_18125	COG1744	ABC transporter substrate-binding protein PnrA-like
J5V76_18130	COG2188	Transcriptional regulator
J5V76_18135	COG1674	ftsk spoiiie
J5V76_18145	COG0740	serine-type endopeptidase activity
J5V76_18150	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V76_18160	COG0527	aspartate kinase activity
J5V76_18165	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V76_18170	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V76_18190	COG4824	toxin secretion phage lysis holin
J5V76_18310	COG1278	Cold shock
J5V76_18320	COG0582	viral genome integration into host DNA
J5V76_18375	COG0305	Participates in initiation and elongation during chromosome replication
J5V76_18410	COG1396	sequence-specific DNA binding
J5V76_18445	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V76_18450	COG1873	PFAM PRC-barrel domain
J5V76_18455	COG0612	Peptidase, M16
J5V76_18460	COG0726	polysaccharide deacetylase
J5V76_18465	COG1185	polyribonucleotide nucleotidyltransferase activity
J5V76_18475	COG0196	riboflavin kinase activity
J5V76_18485	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J5V76_18490	COG1550	Protein conserved in bacteria
J5V76_18495	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J5V76_18500	COG1358	cellular component organization or biogenesis
J5V76_18505	COG2740	Nucleic-acid-binding protein implicated in transcription termination
J5V76_18510	COG0195	Participates in both transcription termination and antitermination
J5V76_18515	COG0779	Required for maturation of 30S ribosomal subunits
J5V76_18525	COG0442	prolyl-tRNA aminoacylation
J5V76_18530	COG0750	zinc metalloprotease
J5V76_18540	COG4589	Belongs to the CDS family
J5V76_18550	COG0233	cytoplasmic translational termination
J5V76_18555	COG0528	UMP kinase activity
J5V76_18560	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J5V76_18565	COG0052	Belongs to the universal ribosomal protein uS2 family
J5V76_18570	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V76_18575	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
J5V76_18580	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
J5V76_18585	COG4974	Belongs to the 'phage' integrase family
J5V76_18590	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
J5V76_18595	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V76_18600	COG0758	DNA mediated transformation
J5V76_18605	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
J5V76_18610	COG0045	succinate-CoA ligase (ADP-forming) activity
J5V76_18615	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V76_18630	COG0335	large ribosomal subunit rRNA binding
J5V76_18635	COG0336	Belongs to the RNA methyltransferase TrmD family
J5V76_18640	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J5V76_18645	COG1837	Belongs to the UPF0109 family
J5V76_18655	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J5V76_18660	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
J5V76_18665	COG0552	protein localization to endoplasmic reticulum
J5V76_18670	COG1196	nuclear chromosome segregation
J5V76_18675	COG0571	ribonuclease III activity
J5V76_18680	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V76_18685	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_18690	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J5V76_18695	COG0416	fatty acid biosynthetic process
J5V76_18700	COG2050	protein possibly involved in aromatic compounds catabolism
J5V76_18700	COG1349	DNA-binding transcription factor activity
J5V76_18705	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J5V76_18710	COG1461	Dihydroxyacetone kinase
J5V76_18715	COG1302	Protein conserved in bacteria
J5V76_18730	COG1564	THIamine pyrophosphokinase
J5V76_18735	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J5V76_18745	COG2815	serine threonine protein kinase
J5V76_18745	COG0515	serine threonine protein kinase
J5V76_18750	COG0631	protein serine/threonine phosphatase activity
J5V76_18755	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J5V76_18760	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J5V76_18760	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V76_18765	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V76_18770	COG0242	peptide deformylase activity
J5V76_18775	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J5V76_18780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V76_18785	COG1758	RNA polymerase activity
J5V76_18800	COG1561	YicC-like family, N-terminal region
J5V76_18805	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J5V76_18820	COG0006	proline dipeptidase activity
J5V76_18840	COG3069	C4-dicarboxylate transmembrane transporter activity
J5V76_18860	COG0167	dihydroorotate dehydrogenase activity
J5V76_18865	COG0543	2 iron, 2 sulfur cluster binding
J5V76_18870	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J5V76_18880	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J5V76_18885	COG0540	Belongs to the ATCase OTCase family
J5V76_18895	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
J5V76_18900	COG0564	pseudouridine synthase activity
J5V76_18905	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J5V76_18915	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J5V76_18920	COG3599	regulation of cell shape
J5V76_18925	COG2302	S4 RNA-binding domain
J5V76_18930	COG0762	integral membrane protein
J5V76_18935	COG1799	cell septum assembly
J5V76_18940	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J5V76_18950	COG1873	PFAM PRC-barrel domain
J5V76_18955	COG1191	sigma factor activity
J5V76_18960	COG1191	sigma factor activity
J5V76_18970	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J5V76_18975	COG0849	cell division
J5V76_18980	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
J5V76_18995	COG0772	Belongs to the SEDS family
J5V76_19000	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J5V76_19005	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V76_19010	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J5V76_19015	COG0768	penicillin binding
J5V76_19020	COG0768	penicillin binding
J5V76_19030	COG0275	rRNA processing
J5V76_19035	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
J5V76_19040	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V76_19045	COG0454	-acetyltransferase
J5V76_19055	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J5V76_19060	COG1399	metal-binding, possibly nucleic acid-binding protein
J5V76_19065	COG1323	Belongs to the UPF0348 family
J5V76_19070	COG3480	Lon protease (S16) C-terminal proteolytic domain
J5V76_19075	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V76_19080	COG3314	Sporulation integral membrane protein YlbJ
J5V76_19090	COG0742	ribosomal rna small subunit methyltransferase
J5V76_19100	COG4471	UPF0298 protein
J5V76_19105	COG3679	Belongs to the UPF0342 family
J5V76_19110	COG0406	alpha-ribazole phosphatase activity
J5V76_19125	COG2340	Cysteine-rich secretory protein family
J5V76_19135	COG3336	cytochrome c oxidase
J5V76_19160	COG0109	protoheme IX farnesyltransferase activity
J5V76_19165	COG1612	heme a metabolic process
J5V76_19170	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
J5V76_19175	COG0772	Belongs to the SEDS family
J5V76_19180	COG4838	Belongs to the UPF0358 family
J5V76_19185	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
J5V76_19190	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
J5V76_19200	COG4896	Protein conserved in bacteria
J5V76_19215	COG1217	gtp-binding protein TYPA
J5V76_19225	COG0483	inositol monophosphate 1-phosphatase activity
J5V76_19235	COG4493	Belongs to the UPF0637 family
J5V76_19240	COG4476	Belongs to the UPF0223 family
J5V76_19245	COG1982	Orn Lys Arg decarboxylase major
J5V76_19290	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V76_19295	COG0022	dehydrogenase e1 component
J5V76_19300	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V76_19315	COG0561	phosphatase activity
J5V76_19320	COG5503	Protein of unknown function (DUF1447)
J5V76_19325	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V76_19330	COG0569	domain protein
J5V76_19340	COG1473	amidohydrolase
J5V76_19345	COG2171	N-acyltransferase activity
J5V76_19350	COG0583	DNA-binding transcription factor activity
J5V76_19355	COG0517	IMP dehydrogenase activity
J5V76_19365	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
J5V76_19375	COG4703	Protein of unknown function (DUF1797)
J5V76_19390	COG2200	EAL domain
J5V76_19395	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_19400	COG1408	metallophosphoesterase
J5V76_19445	COG2814	Major facilitator Superfamily
J5V76_19455	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J5V76_19465	COG3209	COG3209 Rhs family protein
J5V76_19475	COG2205	protein histidine kinase activity
J5V76_19485	COG0436	Aminotransferase
J5V76_19490	COG1609	Transcriptional regulator
J5V76_19495	COG3833	ABC-type maltose transport systems, permease component
J5V76_19500	COG1175	transmembrane transport
J5V76_19505	COG2182	Extracellular solute-binding protein
J5V76_19515	COG0366	Alpha amylase catalytic
J5V76_19520	COG3842	ATPase activity
J5V76_19560	COG0183	Belongs to the thiolase family
J5V76_19590	COG1695	Transcriptional regulator
J5V76_19595	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_19605	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V76_19610	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
J5V76_19615	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J5V76_19620	COG0436	Aminotransferase
J5V76_19625	COG1850	ribulose-bisphosphate carboxylase activity
J5V76_19630	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
J5V76_19655	COG2084	Dehydrogenase
J5V76_19665	COG2199	diguanylate cyclase activity
J5V76_19670	COG0778	Nitroreductase
J5V76_19695	COG1263	PTS System
J5V76_19695	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V76_19695	COG2190	(PTS) system
J5V76_19700	COG3711	transcriptional antiterminator
J5V76_19710	COG2188	Transcriptional regulator
J5V76_19715	COG0363	glucosamine-6-phosphate deaminase activity
J5V76_19720	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J5V76_19730	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J5V76_19735	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
J5V76_19745	COG1547	Domain of unknown function (DUF309)
J5V76_19755	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J5V76_19760	COG4086	secreted protein
J5V76_19765	COG0561	phosphatase activity
J5V76_19770	COG0697	spore germination
J5V76_19785	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V76_19825	COG1686	Belongs to the peptidase S11 family
J5V76_19830	COG1725	Transcriptional regulator
J5V76_19835	COG1131	(ABC) transporter
J5V76_19860	COG1846	Transcriptional regulator
J5V76_19875	COG0598	Magnesium transport protein CorA
J5V76_19890	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
J5V76_19900	COG4974	Belongs to the 'phage' integrase family
J5V76_19910	COG0735	belongs to the Fur family
J5V76_19915	COG1300	Membrane
J5V76_19935	COG0667	Aldo Keto reductase
J5V76_19940	COG0656	L-ascorbic acid biosynthetic process
J5V76_19945	COG0456	acetyltransferase
J5V76_19945	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V76_19955	COG1525	nuclease
J5V76_19955	COG0737	Belongs to the 5'-nucleotidase family
J5V76_19955	COG4085	toxin activity
J5V76_19960	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J5V76_19970	COG0596	Alpha beta hydrolase
J5V76_19975	COG2056	Na+-H+ antiporter family
J5V76_19980	COG1609	Transcriptional regulator
J5V76_19985	COG0456	acetyltransferase
J5V76_19990	COG1073	alpha beta
J5V76_20005	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V76_20005	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V76_20010	COG0307	riboflavin synthase, alpha
J5V76_20015	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V76_20015	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V76_20030	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J5V76_20035	COG4106	trans-aconitate 2-methyltransferase activity
J5V76_20040	COG1073	alpha beta
J5V76_20040	COG2226	methyltransferase
J5V76_20045	COG0156	8-amino-7-oxononanoate synthase activity
J5V76_20055	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V76_20065	COG1757	Na H antiporter
J5V76_20070	COG0737	Belongs to the 5'-nucleotidase family
J5V76_20080	COG1522	sequence-specific DNA binding
J5V76_20110	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5V76_20115	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
J5V76_20125	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J5V76_20135	COG0300	oxidoreductase activity
J5V76_20140	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_20145	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V76_20150	COG1760	l-serine dehydratase
J5V76_20155	COG1760	l-serine dehydratase
J5V76_20165	COG1234	tRNA 3'-trailer cleavage
J5V76_20180	COG1285	pathogenesis
J5V76_20195	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V76_20200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_20215	COG1376	ErfK ybiS ycfS ynhG family protein
J5V76_20220	COG4129	membrane
J5V76_20225	COG1126	abc transporter atp-binding protein
J5V76_20230	COG0765	amino acid transport
J5V76_20235	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V76_20245	COG2816	NAD+ diphosphatase activity
J5V76_20250	COG2323	membrane
J5V76_20255	COG0772	Belongs to the SEDS family
J5V76_20260	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V76_20265	COG0022	dehydrogenase e1 component
J5V76_20270	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V76_20275	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V76_20280	COG3426	butyrate kinase activity
J5V76_20290	COG0280	phosphate acetyltransferase
J5V76_20295	COG3290	protein histidine kinase activity
J5V76_20295	COG3829	transcription factor binding
J5V76_20305	COG0584	glycerophosphoryl diester phosphodiesterase
J5V76_20310	COG3093	addiction module antidote protein HigA
J5V76_20350	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J5V76_20395	COG0745	RESPONSE REGULATOR receiver
J5V76_20400	COG0750	zinc metalloprotease
J5V76_20405	COG0497	DNA recombination
J5V76_20410	COG1438	arginine binding
J5V76_20415	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
J5V76_20420	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J5V76_20425	COG0142	geranyltranstransferase activity
J5V76_20430	COG1722	exodeoxyribonuclease VII activity
J5V76_20435	COG1570	exodeoxyribonuclease VII activity
J5V76_20440	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J5V76_20445	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V76_20450	COG1302	Protein conserved in bacteria
J5V76_20455	COG0439	Biotin carboxylase
J5V76_20460	COG0511	ligase activity, forming carbon-carbon bonds
J5V76_20505	COG3854	ATPases associated with a variety of cellular activities
J5V76_20525	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J5V76_20530	COG0006	proline dipeptidase activity
J5V76_20535	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J5V76_20545	COG3872	metal-dependent enzyme
J5V76_20555	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V76_20560	COG1321	iron dependent repressor
J5V76_20590	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_20600	COG1609	Transcriptional regulator
J5V76_20610	COG2076	Multidrug Resistance protein
J5V76_20615	COG2076	Multidrug Resistance protein
J5V76_20645	COG1131	(ABC) transporter
J5V76_20650	COG1725	Transcriptional regulator
J5V76_20665	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V76_20670	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V76_20675	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J5V76_20680	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V76_20705	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J5V76_20730	COG4970	Tfp pilus assembly protein FimT
J5V76_20740	COG1459	type II secretion system
J5V76_20745	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J5V76_20800	COG0646	methionine synthase
J5V76_20800	COG1410	methionine synthase
J5V76_20805	COG0646	methionine synthase
J5V76_20805	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
J5V76_20810	COG0626	cystathionine gamma-synthase activity
J5V76_20815	COG0626	cystathionine gamma-synthase activity
J5V76_20830	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_20840	COG1940	carbohydrate kinase activity
J5V76_20845	COG4483	Protein conserved in bacteria
J5V76_20850	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J5V76_20855	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V76_20860	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J5V76_20865	COG0704	Plays a role in the regulation of phosphate uptake
J5V76_20875	COG0581	inorganic phosphate transmembrane transporter activity
J5V76_20880	COG0573	inorganic phosphate transmembrane transporter activity
J5V76_20885	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V76_20890	COG0768	penicillin binding
J5V76_20895	COG0477	Major facilitator Superfamily
J5V76_20900	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V76_20920	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J5V76_20925	COG0735	belongs to the Fur family
J5V76_20930	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J5V76_20935	COG1121	(ABC) transporter
J5V76_20940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_20950	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J5V76_20965	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J5V76_20970	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J5V76_20975	COG2384	SAM-dependent methyltransferase
J5V76_20985	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J5V76_20990	COG0358	DNA primase activity
J5V76_21000	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J5V76_21005	COG0517	IMP dehydrogenase activity
J5V76_21010	COG1381	Involved in DNA repair and RecF pathway recombination
J5V76_21020	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
J5V76_21025	COG0295	cytidine deaminase activity
J5V76_21030	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J5V76_21035	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J5V76_21040	COG1480	7TM receptor with intracellular HD hydrolase
J5V76_21045	COG1702	phosphate starvation-inducible protein PhoH
J5V76_21060	COG1610	YqeY-like protein
J5V76_21065	COG0828	Belongs to the bacterial ribosomal protein bS21 family
J5V76_21070	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V76_21075	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J5V76_21085	COG0484	heat shock protein binding
J5V76_21090	COG0443	Heat shock 70 kDa protein
J5V76_21100	COG1420	regulation of RNA biosynthetic process
J5V76_21105	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V76_21110	COG1733	regulation of RNA biosynthetic process
J5V76_21115	COG0481	GTPase activity
J5V76_21125	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
J5V76_21130	COG0268	Binds directly to 16S ribosomal RNA
J5V76_21135	COG1466	dna polymerase III delta subunit
J5V76_21145	COG0658	competence protein
J5V76_21145	COG2333	competence protein COMEC
J5V76_21150	COG2131	deaminase
J5V76_21155	COG1555	photosystem II stabilization
J5V76_21155	COG1596	polysaccharide export
J5V76_21160	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V76_21165	COG2226	methyltransferase
J5V76_21170	COG0799	negative regulation of ribosome biogenesis
J5V76_21175	COG1713	HD superfamily hydrolase involved in NAD metabolism
J5V76_21180	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J5V76_21185	COG1534	Rna-binding protein
J5V76_21190	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J5V76_21195	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J5V76_21200	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
J5V76_21210	COG0688	phosphatidylethanolamine metabolic process
J5V76_21220	COG1595	DNA-templated transcription, initiation
J5V76_21225	COG2357	RelA SpoT domain protein
J5V76_21235	COG1785	Belongs to the alkaline phosphatase family
J5V76_21245	COG2267	carboxylic ester hydrolase activity
J5V76_21280	COG1404	Belongs to the peptidase S8 family
J5V76_21285	COG3186	Phenylalanine-4-hydroxylase
J5V76_21290	COG2154	pterin-4-alpha-carbinolamine dehydratase
J5V76_21295	COG2514	catechol 2,3-dioxygenase activity
J5V76_21300	COG2259	Doxx family
J5V76_21340	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_21350	COG1012	belongs to the aldehyde dehydrogenase family
J5V76_21350	COG1454	alcohol dehydrogenase
J5V76_21355	COG0626	cystathionine gamma-synthase activity
J5V76_21360	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V76_21365	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V76_21370	COG2226	methyltransferase
J5V76_21385	COG0768	penicillin binding
J5V76_21390	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J5V76_21395	COG0572	uridine kinase
J5V76_21400	COG0826	peptidase U32
J5V76_21405	COG0826	peptidase U32
J5V76_21410	COG4122	O-methyltransferase activity
J5V76_21415	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J5V76_21425	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J5V76_21430	COG4472	Bacterial protein of unknown function (DUF965)
J5V76_21435	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V76_21445	COG0628	permease
J5V76_21465	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J5V76_21475	COG0482	sulfurtransferase activity
J5V76_21480	COG1104	cysteine desulfurase activity
J5V76_21485	COG1959	2 iron, 2 sulfur cluster binding
J5V76_21490	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J5V76_21500	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J5V76_21505	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J5V76_21520	COG1490	D-aminoacyl-tRNA deacylase activity
J5V76_21525	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5V76_21530	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V76_21535	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J5V76_21535	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
J5V76_21540	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V76_21545	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V76_21545	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V76_21555	COG2244	polysaccharide biosynthetic process
J5V76_21560	COG2323	membrane
J5V76_21570	COG1862	Preprotein translocase
J5V76_21575	COG0343	queuine tRNA-ribosyltransferase activity
J5V76_21590	COG2255	four-way junction helicase activity
J5V76_21595	COG0632	four-way junction helicase activity
J5V76_21600	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
J5V76_21625	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
J5V76_21630	COG0157	Belongs to the NadC ModD family
J5V76_21635	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
J5V76_21640	COG1104	cysteine desulfurase activity
J5V76_21645	COG1827	regulation of RNA biosynthetic process
J5V76_21650	COG2258	MOSC domain
J5V76_21655	COG0077	Prephenate dehydratase
J5V76_21660	COG0577	efflux transmembrane transporter activity
J5V76_21665	COG0577	efflux transmembrane transporter activity
J5V76_21670	COG1136	(ABC) transporter
J5V76_21675	COG5002	protein histidine kinase activity
J5V76_21680	COG0745	RESPONSE REGULATOR receiver
J5V76_21685	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J5V76_21690	COG3290	protein histidine kinase activity
J5V76_21700	COG2868	ribosomal protein
J5V76_21710	COG1530	ribonuclease E activity
J5V76_21715	COG1994	Peptidase M50
J5V76_21720	COG0739	heme binding
J5V76_21725	COG2894	cell division
J5V76_21730	COG0850	regulation of cytokinetic process
J5V76_21745	COG1077	Cell shape determining protein MreB Mrl
J5V76_21750	COG2003	Belongs to the UPF0758 family
J5V76_21755	COG0424	maF-like protein
J5V76_21765	COG0285	dihydrofolate synthase activity
J5V76_21780	COG1388	LysM domain
J5V76_21785	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V76_21790	COG0113	porphobilinogen synthase activity
J5V76_21795	COG1587	Uroporphyrinogen-III synthase
J5V76_21800	COG0181	hydroxymethylbilane synthase activity
J5V76_21805	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V76_21810	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J5V76_21815	COG1846	Transcriptional regulator
J5V76_21820	COG1764	response to oxidative stress
J5V76_21825	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J5V76_21835	COG1067	ATP-dependent peptidase activity
J5V76_21835	COG0470	DNA polymerase III
J5V76_21845	COG0544	peptidyl-prolyl cis-trans isomerase activity
J5V76_21875	COG0622	Phosphoesterase
J5V76_21885	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J5V76_21890	COG5401	PFAM Sporulation and spore germination
J5V76_21900	COG0477	Major facilitator Superfamily
J5V76_21910	COG1309	transcriptional regulator
J5V76_21920	COG2197	response regulator
J5V76_21925	COG2233	PERMEase
J5V76_21930	COG0402	S-adenosylhomocysteine deaminase activity
J5V76_21935	COG1983	PspC domain protein
J5V76_21940	COG1396	sequence-specific DNA binding
J5V76_21945	COG0697	spore germination
J5V76_21955	COG1959	2 iron, 2 sulfur cluster binding
J5V76_21960	COG1668	transmembrane transport
J5V76_21965	COG4152	abc transporter atp-binding protein
J5V76_21970	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
J5V76_21975	COG1360	Flagellar Motor Protein
J5V76_21980	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V76_21985	COG1876	peptidase activity
J5V76_21990	COG0824	Thioesterase
J5V76_21995	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J5V76_22000	COG1053	succinate dehydrogenase
J5V76_22005	COG2009	succinate dehydrogenase
J5V76_22010	COG1719	4-vinyl reductase, 4VR
J5V76_22015	COG0322	excinuclease ABC activity
J5V76_22020	COG3118	belongs to the thioredoxin family
J5V76_22025	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
J5V76_22030	COG2086	electron transfer activity
J5V76_22035	COG1024	Enoyl-CoA hydratase
J5V76_22040	COG1309	transcriptional regulator
J5V76_22045	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_22070	COG2318	DinB family
J5V76_22100	COG1131	(ABC) transporter
J5V76_22105	COG2205	protein histidine kinase activity
J5V76_22110	COG0745	RESPONSE REGULATOR receiver
J5V76_22120	COG4895	conserved protein (DUF2196)
J5V76_22125	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J5V76_22135	COG2329	Antibiotic biosynthesis monooxygenase
J5V76_22140	COG4509	Sortase family
J5V76_22145	COG1120	ATPase activity
J5V76_22160	COG5386	Cell surface protein
J5V76_22170	COG5386	Cell surface protein
J5V76_22175	COG1114	Component of the transport system for branched-chain amino acids
J5V76_22185	COG1193	negative regulation of DNA recombination
J5V76_22190	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V76_22190	COG1796	DNA polymerase
J5V76_22195	COG1286	toxin biosynthetic process
J5V76_22200	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
J5V76_22205	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V76_22240	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J5V76_22245	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V76_22255	COG1418	mRNA catabolic process
J5V76_22285	COG2814	Major facilitator Superfamily
J5V76_22290	COG1566	PFAM secretion protein HlyD family protein
J5V76_22295	COG1309	transcriptional regulator
J5V76_22300	COG1363	Peptidase, m42
J5V76_22310	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J5V76_22325	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V76_22335	COG1484	DNA-dependent DNA replication
J5V76_22340	COG3611	Membrane attachment protein
J5V76_22345	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5V76_22350	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
J5V76_22355	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V76_22360	COG0237	dephospho-CoA kinase activity
J5V76_22365	COG1971	Probably functions as a manganese efflux pump
J5V76_22375	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V76_22375	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V76_22380	COG5002	protein histidine kinase activity
J5V76_22385	COG0745	RESPONSE REGULATOR receiver
J5V76_22400	COG0039	L-malate dehydrogenase activity
J5V76_22405	COG0538	isocitrate dehydrogenase activity
J5V76_22410	COG0372	Belongs to the citrate synthase family
J5V76_22420	COG0628	permease
J5V76_22425	COG3030	protein affecting phage T7 exclusion by the F plasmid
J5V76_22435	COG0205	6-phosphofructokinase activity
J5V76_22445	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J5V76_22450	COG1725	Transcriptional regulator
J5V76_22455	COG0281	malic enzyme
J5V76_22460	COG0587	DNA-directed DNA polymerase activity
J5V76_22475	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J5V76_22490	COG4109	DRTGG domain
J5V76_22500	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V76_22505	COG0006	proline dipeptidase activity
J5V76_22530	COG0662	Cupin 2, conserved barrel domain protein
J5V76_22540	COG1476	TRANSCRIPTIONal
J5V76_22555	COG1028	Short-chain dehydrogenase reductase Sdr
J5V76_22560	COG0589	response to stress
J5V76_22575	COG0165	Argininosuccinate lyase
J5V76_22580	COG0137	argininosuccinate synthase activity
J5V76_22595	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_22615	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J5V76_22620	COG0827	DNA restriction-modification system
J5V76_22625	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
J5V76_22630	COG3874	Sporulation protein YtfJ
J5V76_22645	COG1574	metal-dependent hydrolase with the TIM-barrel fold
J5V76_22655	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V76_22670	COG1104	cysteine desulfurase activity
J5V76_22675	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
J5V76_22685	COG1309	transcriptional regulator
J5V76_22690	COG1956	GAF domain-containing protein
J5V76_22695	COG0626	cystathionine gamma-synthase activity
J5V76_22700	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J5V76_22725	COG1595	DNA-templated transcription, initiation
J5V76_22735	COG0110	maltose O-acetyltransferase activity
J5V76_22740	COG0456	acetyltransferase
J5V76_22745	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V76_22750	COG0454	-acetyltransferase
J5V76_22755	COG0517	IMP dehydrogenase activity
J5V76_22760	COG0123	including yeast histone deacetylase and acetoin utilization protein
J5V76_22775	COG0745	RESPONSE REGULATOR receiver
J5V76_22780	COG5002	protein histidine kinase activity
J5V76_22785	COG0666	response to abiotic stimulus
J5V76_22795	COG1970	mechanosensitive ion channel activity
J5V76_22815	COG1609	Transcriptional regulator
J5V76_22825	COG1605	Chorismate mutase
J5V76_22825	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J5V76_22830	COG4851	CamS sex pheromone cAM373 precursor
J5V76_22835	COG3118	belongs to the thioredoxin family
J5V76_22845	COG2309	aminopeptidase activity
J5V76_22865	COG0697	spore germination
J5V76_22870	COG0789	Transcriptional regulator
J5V76_22875	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J5V76_22885	COG1674	ftsk spoiiie
J5V76_22900	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V76_22905	COG4848	Belongs to the UPF0354 family
J5V76_22910	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_22915	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
J5V76_22920	COG1363	Peptidase, m42
J5V76_22930	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_22935	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J5V76_22945	COG0510	thiamine kinase activity
J5V76_22950	COG1523	belongs to the glycosyl hydrolase 13 family
J5V76_22960	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V76_22965	COG1349	DNA-binding transcription factor activity
J5V76_22970	COG1187	pseudouridine synthase activity
J5V76_22975	COG2244	polysaccharide biosynthetic process
J5V76_22980	COG2081	HI0933 family
J5V76_22985	COG2814	Major facilitator Superfamily
J5V76_22995	COG3832	glyoxalase III activity
J5V76_23015	COG1329	Transcriptional regulator
J5V76_23040	COG0314	molybdopterin synthase activity
J5V76_23045	COG1763	Mo-molybdopterin cofactor biosynthetic process
J5V76_23050	COG0303	'Molybdopterin
J5V76_23055	COG0315	cyclic pyranopterin monophosphate synthase activity
J5V76_23060	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V76_23065	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5V76_23085	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_23095	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J5V76_23135	COG0495	leucyl-tRNA aminoacylation
J5V76_23140	COG2814	Major facilitator Superfamily
J5V76_23145	COG0475	glutathione-regulated potassium exporter activity
J5V76_23150	COG0490	domain, Protein
J5V76_23155	COG0582	viral genome integration into host DNA
J5V76_23165	COG1136	(ABC) transporter
J5V76_23185	COG1242	4 iron, 4 sulfur cluster binding
J5V76_23190	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
J5V76_23205	COG2267	carboxylic ester hydrolase activity
J5V76_23210	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
J5V76_23215	COG0671	phosphoesterase, PA-phosphatase related
J5V76_23220	COG0438	transferase activity, transferring glycosyl groups
J5V76_23225	COG0746	molybdenum cofactor guanylyltransferase activity
J5V76_23230	COG0521	Mo-molybdopterin cofactor biosynthetic process
J5V76_23245	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J5V76_23250	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
J5V76_23290	COG5002	protein histidine kinase activity
J5V76_23295	COG3852	Histidine kinase
J5V76_23300	COG0753	catalase activity
J5V76_23305	COG2267	carboxylic ester hydrolase activity
J5V76_23315	COG1368	sulfuric ester hydrolase activity
J5V76_23325	COG4895	conserved protein (DUF2196)
J5V76_23340	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V76_23345	COG1116	anion transmembrane transporter activity
J5V76_23350	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V76_23370	COG0494	nUDIX hydrolase
J5V76_23405	COG2076	Multidrug Resistance protein
J5V76_23410	COG2076	Multidrug Resistance protein
J5V76_23415	COG0789	Transcriptional regulator
J5V76_23420	COG1854	S-ribosylhomocysteine lyase activity
J5V76_23430	COG0288	reversible hydration of carbon dioxide
J5V76_23435	COG1271	oxidase subunit
J5V76_23440	COG1294	oxidase, subunit
J5V76_23465	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_23485	COG1842	Phage shock protein A
J5V76_23510	COG3859	Proton-coupled thiamine transporter YuaJ
J5V76_23515	COG5002	protein histidine kinase activity
J5V76_23520	COG0745	RESPONSE REGULATOR receiver
J5V76_23545	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V76_23550	COG1597	lipid kinase activity
J5V76_23575	COG4977	sequence-specific DNA binding
J5V76_23585	COG0577	efflux transmembrane transporter activity
J5V76_23590	COG1136	(ABC) transporter
J5V76_23595	COG3708	Transcriptional regulator
J5V76_23595	COG2207	Transcriptional regulator
J5V76_23605	COG1131	(ABC) transporter
J5V76_23615	COG5658	integral membrane protein
J5V76_23620	COG0640	Transcriptional regulator
J5V76_23625	COG0745	RESPONSE REGULATOR receiver
J5V76_23630	COG2205	protein histidine kinase activity
J5V76_23635	COG0577	efflux transmembrane transporter activity
J5V76_23640	COG0577	efflux transmembrane transporter activity
J5V76_23645	COG1136	(ABC) transporter
J5V76_23650	COG0577	efflux transmembrane transporter activity
J5V76_23665	COG2188	Transcriptional regulator
J5V76_23685	COG3964	amidohydrolase
J5V76_23715	COG4948	Mandelate Racemase Muconate Lactonizing
J5V76_23720	COG0318	PFAM AMP-dependent synthetase and ligase
J5V76_23725	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J5V76_23730	COG0596	Alpha beta hydrolase
J5V76_23735	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J5V76_23740	COG1169	isochorismate synthase
J5V76_23745	COG1575	Belongs to the MenA family. Type 1 subfamily
J5V76_23750	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J5V76_23755	COG1278	Cold shock
J5V76_23765	COG0789	Transcriptional regulator
J5V76_23775	COG0058	SHG alpha-glucan phosphorylase activity
J5V76_23785	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V76_23790	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V76_23795	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
J5V76_23935	COG1285	pathogenesis
J5V76_23940	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
J5V76_23950	COG0166	Belongs to the GPI family
J5V76_23955	COG2155	Conserved Protein
J5V76_23960	COG1098	S1 RNA binding domain
J5V76_23965	COG0436	Aminotransferase
J5V76_23970	COG1522	sequence-specific DNA binding
J5V76_23975	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V76_23980	COG2267	carboxylic ester hydrolase activity
J5V76_23990	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
J5V76_24010	COG5018	Exonuclease
J5V76_24015	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V76_24035	COG2050	protein possibly involved in aromatic compounds catabolism
J5V76_24045	COG1268	BioY protein
J5V76_24050	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V76_24055	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V76_24065	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J5V76_24070	COG3584	3D domain protein
J5V76_24085	COG1252	NADH dehydrogenase
J5V76_24090	COG0492	ferredoxin-NADP+ reductase activity
J5V76_24095	COG3708	Transcriptional regulator
J5V76_24110	COG1683	Conserved Protein
J5V76_24130	COG0316	Belongs to the HesB IscA family
J5V76_24135	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J5V76_24140	COG4844	belongs to the
J5V76_24145	COG1252	NADH dehydrogenase
J5V76_24155	COG0390	transport system, permease component
J5V76_24160	COG2824	Alkylphosphonate utilization operon protein PhnA
J5V76_24205	COG4837	Protein of unknown function (DUF1462)
J5V76_24210	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J5V76_24220	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V76_24225	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J5V76_24235	COG0647	UMP catabolic process
J5V76_24245	COG2445	Protein of unknown function DUF86
J5V76_24250	COG1494	fructose-1,6-bisphosphatase
J5V76_24265	COG4470	Protein conserved in bacteria
J5V76_24275	COG0789	Transcriptional regulator
J5V76_24280	COG4377	Putative membrane peptidase family (DUF2324)
J5V76_24300	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J5V76_24305	COG0739	heme binding
J5V76_24315	COG3377	Domain of unknown function (DUF1805)
J5V76_24320	COG0737	Belongs to the 5'-nucleotidase family
J5V76_24325	COG1695	Transcriptional regulator
J5V76_24335	COG0719	Fe-S assembly protein
J5V76_24340	COG0822	iron-sulfur transferase activity
J5V76_24345	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J5V76_24350	COG0719	Fe-S assembly protein
J5V76_24355	COG0396	ATPase activity
J5V76_24360	COG1464	Belongs to the NlpA lipoprotein family
J5V76_24365	COG1464	Belongs to the NlpA lipoprotein family
J5V76_24370	COG2011	ABC-type metal ion transport system permease component
J5V76_24385	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V76_24390	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J5V76_24395	COG0509	glycine decarboxylation via glycine cleavage system
J5V76_24400	COG1393	Belongs to the ArsC family
J5V76_24455	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_24460	COG1960	acyl-CoA dehydrogenase activity
J5V76_24465	COG0183	Belongs to the thiolase family
J5V76_24470	COG1024	Enoyl-CoA hydratase
J5V76_24470	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V76_24480	COG1686	Belongs to the peptidase S11 family
J5V76_24485	COG0506	proline dehydrogenase activity
J5V76_24495	COG0011	TIGRFAM Protein of
J5V76_24500	COG0840	transmembrane signaling receptor activity
J5V76_24515	COG2814	Major facilitator Superfamily
J5V76_24520	COG0531	amino acid
J5V76_24545	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V76_24575	COG0586	Pfam SNARE associated Golgi protein
J5V76_24585	COG1376	ErfK ybiS ycfS ynhG family protein
J5V76_24590	COG0745	RESPONSE REGULATOR receiver
J5V76_24595	COG5002	protein histidine kinase activity
J5V76_24605	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V76_24615	COG0840	transmembrane signaling receptor activity
J5V76_24620	COG0840	transmembrane signaling receptor activity
J5V76_24625	COG2151	metal-sulfur cluster biosynthetic enzyme
J5V76_24630	COG3227	Zinc metalloprotease (Elastase)
J5V76_24635	COG1741	Belongs to the pirin family
J5V76_24650	COG0586	Pfam SNARE associated Golgi protein
J5V76_24655	COG0475	glutathione-regulated potassium exporter activity
J5V76_24660	COG0490	domain, Protein
J5V76_24665	COG1115	amino acid carrier protein
J5V76_24670	COG0783	Belongs to the Dps family
J5V76_24680	COG2318	DinB family
J5V76_24690	COG1611	Belongs to the LOG family
J5V76_24700	COG1528	Iron-storage protein
J5V76_24705	COG2311	Membrane
J5V76_24710	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_24715	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_24720	COG1115	amino acid carrier protein
J5V76_24725	COG2910	NAD(P)H-binding
J5V76_24750	COG0656	L-ascorbic acid biosynthetic process
J5V76_24755	COG2814	Major facilitator Superfamily
J5V76_24760	COG1733	regulation of RNA biosynthetic process
J5V76_24770	COG1252	NADH dehydrogenase
J5V76_24790	COG0840	transmembrane signaling receptor activity
J5V76_24790	COG3290	protein histidine kinase activity
J5V76_24800	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
J5V76_24815	COG3655	Transcriptional regulator
J5V76_24830	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_24840	COG1733	regulation of RNA biosynthetic process
J5V76_24845	COG0778	Nitroreductase
J5V76_24850	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V76_24855	COG4224	UPF0291 protein
J5V76_24860	COG1522	sequence-specific DNA binding
J5V76_24865	COG0288	reversible hydration of carbon dioxide
J5V76_24870	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
J5V76_24875	COG2233	PERMEase
J5V76_24900	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_24920	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J5V76_24925	COG0557	exoribonuclease II activity
J5V76_24930	COG1647	Serine aminopeptidase, S33
J5V76_24935	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V76_24940	COG1346	cytolysis
J5V76_24955	COG0148	phosphopyruvate hydratase activity
J5V76_24965	COG0149	triose-phosphate isomerase activity
J5V76_24970	COG0126	phosphoglycerate kinase activity
J5V76_24975	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V76_24990	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
J5V76_25020	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V76_25035	COG2323	membrane
J5V76_25045	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V76_25050	COG1481	regulation of sporulation
J5V76_25055	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J5V76_25060	COG1660	Displays ATPase and GTPase activities
J5V76_25065	COG1051	belongs to the nudix hydrolase family
J5V76_25075	COG0492	ferredoxin-NADP+ reductase activity
J5V76_25080	COG0457	Tetratricopeptide repeat
J5V76_25085	COG0110	maltose O-acetyltransferase activity
J5V76_25090	COG0546	phosphoglycolate phosphatase activity
J5V76_25095	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
J5V76_25100	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
J5V76_25105	COG1950	PFAM Membrane protein of
J5V76_25115	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V76_25135	COG0789	Transcriptional regulator
J5V76_25170	COG0583	DNA-binding transcription factor activity
J5V76_25175	COG0789	Transcriptional regulator
J5V76_25180	COG0655	NAD(P)H dehydrogenase (quinone) activity
J5V76_25185	COG0488	(ABC) transporter
J5V76_25195	COG1132	(ABC) transporter
J5V76_25200	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V76_25205	COG3409	Peptidoglycan-binding domain 1 protein
J5V76_25205	COG0793	Belongs to the peptidase S41A family
J5V76_25210	COG2177	Part of the ABC transporter FtsEX involved in
J5V76_25215	COG2884	Cell division ATP-binding protein ftsE
J5V76_25240	COG1131	(ABC) transporter
J5V76_25275	COG1278	Cold shock
J5V76_25280	COG1040	competence protein
J5V76_25285	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
J5V76_25290	COG0791	NLP P60 protein
J5V76_25290	COG1388	LysM domain
J5V76_25295	COG1733	regulation of RNA biosynthetic process
J5V76_25300	COG1307	EDD domain protein, DegV family
J5V76_25305	COG1739	Uncharacterized protein family UPF0029
J5V76_25310	COG1316	TRANSCRIPTIONal
J5V76_25315	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J5V76_25320	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V76_25325	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V76_25335	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
J5V76_25335	COG3933	PFAM sigma-54 factor interaction domain-containing protein
J5V76_25355	COG1486	melibiose metabolic process
J5V76_25360	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V76_25365	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V76_25385	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V76_25395	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V76_25400	COG1301	dicarboxylic acid transport
J5V76_25415	COG1511	domain protein
J5V76_25420	COG0583	DNA-binding transcription factor activity
J5V76_25425	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
J5V76_25435	COG1271	oxidase subunit
J5V76_25440	COG1294	oxidase, subunit
J5V76_25445	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V76_25450	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
J5V76_25455	COG1620	l-lactate permease
J5V76_25465	COG2389	metal-binding protein
J5V76_25475	COG1368	sulfuric ester hydrolase activity
J5V76_25485	COG1388	LysM domain
J5V76_25485	COG0791	NLP P60 protein
J5V76_25490	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V76_25500	COG1215	transferase activity, transferring glycosyl groups
J5V76_25505	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V76_25510	COG1388	LysM domain
J5V76_25510	COG3584	3D domain protein
J5V76_25535	COG4715	Zinc finger, swim domain protein
J5V76_25540	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V76_25580	COG0577	efflux transmembrane transporter activity
J5V76_25585	COG1136	(ABC) transporter
J5V76_25620	COG3850	Histidine kinase
J5V76_25620	COG5002	protein histidine kinase activity
J5V76_25625	COG0745	RESPONSE REGULATOR receiver
J5V76_25630	COG1316	TRANSCRIPTIONal
J5V76_25650	COG1134	teichoic acid transport
J5V76_25655	COG1682	transport, permease protein
J5V76_25660	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J5V76_25670	COG1215	transferase activity, transferring glycosyl groups
J5V76_25705	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
J5V76_25715	COG1609	Transcriptional regulator
J5V76_25720	COG0726	polysaccharide deacetylase
J5V76_25730	COG0739	heme binding
J5V76_25745	COG3279	Response regulator of the LytR AlgR family
J5V76_25750	COG2385	sporulation resulting in formation of a cellular spore
J5V76_25765	COG4836	Membrane
J5V76_25770	COG1007	ATP synthesis coupled electron transport
J5V76_25775	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V76_25780	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
J5V76_25785	COG0713	ATP synthesis coupled electron transport
J5V76_25790	COG0839	Belongs to the complex I subunit 6 family
J5V76_25800	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
J5V76_25805	COG0649	NAD binding
J5V76_25815	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V76_25820	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V76_25825	COG5001	Diguanylate cyclase
J5V76_25825	COG3300	MHYT domain
J5V76_25840	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J5V76_25845	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J5V76_25850	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
J5V76_25855	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
J5V76_25860	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J5V76_25865	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J5V76_25875	COG0356	it plays a direct role in the translocation of protons across the membrane
J5V76_25900	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
J5V76_25910	COG0698	ribose 5-phosphate isomerase
J5V76_25920	COG2190	(PTS) system
J5V76_25925	COG2259	Doxx family
J5V76_25930	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V76_25940	COG1971	Probably functions as a manganese efflux pump
J5V76_25945	COG0009	L-threonylcarbamoyladenylate synthase
J5V76_25960	COG2890	protein-(glutamine-N5) methyltransferase activity
J5V76_25965	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J5V76_25970	COG1435	thymidine kinase activity
J5V76_25980	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
J5V76_25985	COG1494	fructose-1,6-bisphosphatase
J5V76_26005	COG4821	SIS domain
J5V76_26010	COG0504	CTP synthase activity
J5V76_26015	COG3343	RNA polymerase activity
J5V76_26025	COG1960	acyl-CoA dehydrogenase activity
J5V76_26030	COG1960	acyl-CoA dehydrogenase activity
J5V76_26035	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V76_26040	COG0183	Belongs to the thiolase family
J5V76_26045	COG2181	nitrate reductase activity
J5V76_26045	COG0247	lactate metabolic process
J5V76_26050	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V76_26055	COG4294	response to UV
J5V76_26060	COG5001	Diguanylate cyclase
J5V76_26060	COG3300	MHYT domain
J5V76_26075	COG3227	Zinc metalloprotease (Elastase)
J5V76_26080	COG2197	response regulator
J5V76_26085	COG4585	Histidine kinase
J5V76_26090	COG0842	Transport permease protein
J5V76_26095	COG1131	(ABC) transporter
J5V76_26100	COG0024	Methionine aminopeptidase
J5V76_26110	COG2234	aminopeptidase activity
J5V76_26130	COG4506	Protein conserved in bacteria
J5V76_26135	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V76_26150	COG0010	Belongs to the arginase family
J5V76_26155	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
J5V76_26160	COG2814	Major facilitator Superfamily
J5V76_26165	COG0789	Transcriptional regulator
J5V76_26170	COG0584	glycerophosphoryl diester phosphodiesterase
J5V76_26175	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_26185	COG1994	Peptidase M50
J5V76_26195	COG1078	dGTPase activity
J5V76_26200	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V76_26205	COG1120	ATPase activity
J5V76_26210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_26215	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V76_26220	COG4844	belongs to the
J5V76_26235	COG0280	phosphate acetyltransferase
J5V76_26240	COG3253	May function as heme-dependent peroxidase
J5V76_26250	COG3773	Cell wall hydrolase
J5V76_26260	COG2363	Small membrane protein
J5V76_26275	COG2233	PERMEase
J5V76_26280	COG0561	phosphatase activity
J5V76_26285	COG2814	Major facilitator Superfamily
J5V76_26290	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J5V76_26295	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V76_26300	COG1131	(ABC) transporter
J5V76_26305	COG2755	lipolytic protein G-D-S-L family
J5V76_26310	COG1609	Transcriptional regulator
J5V76_26320	COG0460	homoserine dehydrogenase
J5V76_26325	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
J5V76_26330	COG2873	o-acetylhomoserine
J5V76_26340	COG1011	Hydrolase
J5V76_26345	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V76_26355	COG2197	response regulator
J5V76_26360	COG4585	Histidine kinase
J5V76_26360	COG2203	Gaf domain
J5V76_26365	COG0351	phosphomethylpyrimidine kinase
J5V76_26370	COG3706	GGDEF domain
J5V76_26375	COG2879	small protein
J5V76_26380	COG1966	Carbon starvation protein
J5V76_26385	COG3279	Response regulator of the LytR AlgR family
J5V76_26390	COG0477	Major facilitator Superfamily
J5V76_26415	COG0840	transmembrane signaling receptor activity
J5V76_26425	COG1607	acyl-coa hydrolase
J5V76_26430	COG1216	Glycosyl transferase, family 2
J5V76_26440	COG1216	Glycosyl transferase, family 2
J5V76_26450	COG4485	Bacterial membrane protein, YfhO
J5V76_26455	COG0463	Glycosyl transferase, family 2
J5V76_26465	COG1309	transcriptional regulator
J5V76_26470	COG0488	(ABC) transporter
J5V76_26475	COG1309	transcriptional regulator
J5V76_26480	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V76_26485	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V76_26485	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V76_26490	COG0628	permease
J5V76_26500	COG1380	Effector of murein hydrolase LrgA
J5V76_26505	COG3279	Response regulator of the LytR AlgR family
J5V76_26510	COG3275	phosphorelay sensor kinase activity
J5V76_26515	COG2814	Major facilitator Superfamily
J5V76_26520	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V76_26525	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
J5V76_26530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V76_26580	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J5V76_26585	COG1272	protein, Hemolysin III
J5V76_26610	COG1164	Oligoendopeptidase f
J5V76_26620	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
J5V76_26630	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V76_26635	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
J5V76_26640	COG4853	Protein conserved in bacteria
J5V76_26650	COG5002	protein histidine kinase activity
J5V76_26655	COG0745	RESPONSE REGULATOR receiver
J5V76_26685	COG0305	Participates in initiation and elongation during chromosome replication
J5V76_26690	COG0359	binds to the 23S rRNA
J5V76_26695	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
J5V76_26700	COG4241	membrane
J5V76_26710	COG0629	single-stranded DNA binding
J5V76_26715	COG0360	Binds together with S18 to 16S ribosomal RNA
J5V76_26720	COG0012	GTP binding
J5V76_26725	COG4481	Protein conserved in bacteria
J5V76_26730	COG0668	transmembrane transport
J5V76_26740	COG1475	DNA binding
J5V76_26745	COG1192	Involved in chromosome partitioning
J5V76_26750	COG1475	DNA binding
J5V76_26755	COG0357	Ribosomal RNA small subunit methyltransferase G
J5V76_26760	COG0445	tRNA wobble uridine modification
J5V76_26765	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J5V76_26770	COG1847	R3H domain protein
J5V76_26775	COG0706	membrane insertase activity
J5V76_26780	COG0594	ribonuclease P activity
J5V76_26785	COG0230	Belongs to the bacterial ribosomal protein bL34 family
J5V76_26805	COG0741	lytic transglycosylase activity
J5V76_26820	COG1674	ftsk spoiiie
J5V76_26835	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V76_26860	COG5002	protein histidine kinase activity
J5V76_26880	COG0024	Methionine aminopeptidase
J5V76_26905	COG1396	sequence-specific DNA binding
J5V76_26995	COG0741	lytic transglycosylase activity
J5V76_26995	COG0791	NLP P60 protein
J5V76_27005	COG0791	NLP P60 protein
J5V76_27005	COG3883	PFAM NLP P60 protein
J5V76_27080	COG2002	toxin-antitoxin pair type II binding
J5V76_27090	COG1923	regulation of RNA biosynthetic process
J5V76_27105	COG0582	viral genome integration into host DNA
J5V76_27120	COG2732	(Barnase) inhibitor
J5V76_27185	COG0662	Cupin 2, conserved barrel domain protein
J5V76_27195	COG1923	regulation of RNA biosynthetic process
J5V76_27220	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V76_27250	COG4974	Belongs to the 'phage' integrase family
J5V76_27265	COG1136	(ABC) transporter
J5V76_27300	COG0450	alkyl hydroperoxide reductase
J5V76_27305	COG0833	amino acid
J5V76_27315	COG1982	Orn Lys Arg decarboxylase major
J5V76_27335	COG0517	IMP dehydrogenase activity
J5V76_27335	COG4175	Glycine betaine
J5V76_27340	COG4176	ABC-type proline glycine betaine transport system permease component
J5V76_27375	COG3344	reverse transcriptase
J5V76_27395	COG1329	Transcriptional regulator
J5V76_27430	COG1131	(ABC) transporter
J5V76_27435	COG1725	Transcriptional regulator
J5V76_27450	COG0745	RESPONSE REGULATOR receiver
J5V76_27455	COG2205	protein histidine kinase activity
J5V76_27465	COG1136	(ABC) transporter
J5V76_27470	COG0577	efflux transmembrane transporter activity
J5V76_27485	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V76_27485	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V76_27500	COG1136	(ABC) transporter
J5V76_27515	COG1309	transcriptional regulator
J5V76_27525	COG3858	chitin binding
J5V76_27530	COG0697	spore germination
J5V76_27550	COG0697	spore germination
J5V76_27560	COG0697	spore germination
J5V76_27565	COG2508	Transcriptional regulator
J5V76_27565	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V76_27590	COG4974	Belongs to the 'phage' integrase family
J5V76_27600	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V76_27610	COG2239	Acts as a magnesium transporter
J5V76_27615	COG0772	Belongs to the SEDS family
J5V76_27620	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_27625	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
J5V76_27630	COG1073	alpha beta
J5V76_27635	COG2267	carboxylic ester hydrolase activity
J5V76_27640	COG1285	pathogenesis
J5V76_27645	COG0833	amino acid
J5V76_27675	COG0745	RESPONSE REGULATOR receiver
J5V76_27695	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V76_27720	COG1396	sequence-specific DNA binding
J5V76_27765	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
J5V76_27780	COG2002	toxin-antitoxin pair type II binding
J5V76_27860	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
J5V76_27885	COG2814	Major facilitator Superfamily
J5V76_27935	COG1923	regulation of RNA biosynthetic process
J5V76_27945	COG2002	toxin-antitoxin pair type II binding
J5V76_27950	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V76_27950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V76_27955	COG1252	NADH dehydrogenase
J5V76_27965	COG0697	spore germination
J5V76_27995	COG2239	Acts as a magnesium transporter
J5V76_28005	COG0657	acetylesterase activity
J5V76_28005	COG2755	lipolytic protein G-D-S-L family
J5V76_28025	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V76_28035	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V76_28100	COG1846	Transcriptional regulator
J5V76_28135	COG4641	Protein conserved in bacteria
J5V76_28140	COG2089	acid synthase
J5V76_28155	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
J5V76_28160	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V76_28165	COG1088	dTDP-glucose 4,6-dehydratase activity
J5V76_28170	COG1086	Polysaccharide biosynthesis protein
J5V76_28175	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J5V76_28180	COG0463	Glycosyl transferase, family 2
J5V76_28260	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V76_28345	COG2140	Oxalate decarboxylase
J5V76_28360	COG0024	Methionine aminopeptidase
J5V76_28365	COG1923	regulation of RNA biosynthetic process
J5V76_28370	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V76_28380	COG0776	regulation of translation
J5V76_28385	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J5V76_28390	COG0367	asparagine synthase
J5V76_28410	COG0542	response to heat
J5V76_28420	COG3397	chitin binding
J5V76_28510	COG1404	Belongs to the peptidase S8 family
J5V76_28530	COG2814	Major facilitator Superfamily
J5V76_28535	COG2234	aminopeptidase activity
J5V76_28545	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V76_28560	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V76_28565	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V76_28570	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V76_28580	COG0456	acetyltransferase
J5V76_28660	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V76_28705	COG0582	viral genome integration into host DNA
J5V76_28840	COG0791	NLP P60 protein
J5V76_28840	COG3883	PFAM NLP P60 protein
J5V76_28940	COG1396	sequence-specific DNA binding
J5V76_28960	COG3409	Peptidoglycan-binding domain 1 protein
J5V76_28970	COG0582	viral genome integration into host DNA