locus-tag class description DN409_00010 PF02767 DNA polymerase III beta subunit, central domain DN409_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain DN409_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain DN409_00025 PF01751 Toprim domain DN409_00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_00025 PF00204 DNA gyrase B DN409_00025 PF00986 DNA gyrase B subunit, carboxyl terminus DN409_00030 PF00521 DNA gyrase/topoisomerase IV, subunit A DN409_00030 PF03989 DNA gyrase C-terminal domain, beta-propeller DN409_00060 PF14175 YaaC-like Protein DN409_00065 PF00571 CBS domain DN409_00065 PF00478 IMP dehydrogenase / GMP reductase domain DN409_00070 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_00070 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_00085 PF02403 Seryl-tRNA synthetase N-terminal domain DN409_00085 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_00100 PF01712 Deoxynucleoside kinase DN409_00105 PF01712 Deoxynucleoside kinase DN409_00110 PF00857 Isochorismatase family DN409_00115 PF14437 MafB19-like deaminase DN409_00125 PF12169 DNA polymerase III subunits gamma and tau domain III DN409_00140 PF10704 Protein of unknown function (DUF2508) DN409_00145 PF07441 SigmaK-factor processing regulatory protein BofA DN409_00180 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN409_00180 PF01276 Orn/Lys/Arg decarboxylase, major domain DN409_00190 PF09115 DNA polymerase III, delta subunit, C terminal DN409_00195 PF04468 PSP1 C-terminal conserved region DN409_00200 PF06156 Initiation control protein YabA DN409_00205 PF05175 Methyltransferase small domain DN409_00210 PF01541 GIY-YIG catalytic domain DN409_00215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_00220 PF18277 AbrB C-terminal domain DN409_00220 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_00225 PF01588 Putative tRNA binding domain DN409_00225 PF09334 tRNA synthetases class I (M) DN409_00225 PF08264 Anticodon-binding domain of tRNA DN409_00230 PF01026 TatD related DNase DN409_00235 PF13662 Toprim domain DN409_00235 PF13331 Domain of unknown function (DUF4093) DN409_00245 PF05582 YabG peptidase U57 DN409_00250 PF06257 Biofilm formation stimulator VEG DN409_00255 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_00265 PF09182 Bacterial purine repressor, N-terminal DN409_00265 PF00156 Phosphoribosyl transferase domain DN409_00270 PF01042 Endoribonuclease L-PSP DN409_00275 PF04026 SpoVG DN409_00285 PF14572 Phosphoribosyl synthetase-associated domain DN409_00285 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN409_00290 PF01195 Peptidyl-tRNA hydrolase DN409_00300 PF03461 TRCF domain DN409_00300 PF00271 Helicase conserved C-terminal domain DN409_00300 PF02559 CarD-like/TRCF domain DN409_00300 PF00270 DEAD/DEAH box helicase DN409_00300 PF17757 UvrB interaction domain DN409_00305 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN409_00305 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_00310 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_00310 PF01943 Polysaccharide biosynthesis protein DN409_00315 PF03819 MazG nucleotide pyrophosphohydrolase domain DN409_00315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_00320 PF01479 S4 domain DN409_00325 PF07873 YabP family DN409_00330 PF09578 Spore cortex protein YabQ (Spore_YabQ) DN409_00340 PF00575 S1 RNA binding domain DN409_00355 PF07228 Stage II sporulation protein E (SpoIIE) DN409_00360 PF09179 TilS substrate binding domain DN409_00360 PF11734 TilS substrate C-terminal domain DN409_00360 PF01171 PP-loop family DN409_00370 PF01434 Peptidase family M41 DN409_00370 PF00004 ATPase family associated with various cellular activities (AAA) DN409_00370 PF17862 AAA+ lid domain DN409_00370 PF06480 FtsH Extracellular DN409_00385 PF00291 Pyridoxal-phosphate dependent enzyme DN409_00390 PF00425 chorismate binding enzyme DN409_00390 PF04715 Anthranilate synthase component I, N terminal region DN409_00395 PF00117 Glutamine amidotransferase class-I DN409_00400 PF01063 Amino-transferase class IV DN409_00405 PF00809 Pterin binding enzyme DN409_00410 PF02152 Dihydroneopterin aldolase DN409_00415 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DN409_00420 PF01381 Helix-turn-helix DN409_00425 PF01207 Dihydrouridine synthase (Dus) DN409_00515 PF05848 CtsR N-terminal HTH domain DN409_00515 PF17727 CtsR C-terminal dimerization domain DN409_00520 PF02151 UvrB/uvrC motif DN409_00530 PF02861 Clp amino terminal domain, pathogenicity island component DN409_00530 PF17871 AAA lid domain DN409_00530 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_00530 PF07724 AAA domain (Cdc48 subfamily) DN409_00530 PF00004 ATPase family associated with various cellular activities (AAA) DN409_00535 PF18073 Rubredoxin metal binding domain DN409_00555 PF02542 YgbB family DN409_00565 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_00565 PF06426 Serine acetyltransferase, N-terminal DN409_00575 PF00636 Ribonuclease III domain DN409_00580 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN409_00580 PF00588 SpoU rRNA Methylase family DN409_00585 PF05991 YacP-like NYN domain DN409_00590 PF04542 Sigma-70 region 2 DN409_00590 PF08281 Sigma-70, region 4 DN409_00600 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN409_00605 PF00467 KOW motif DN409_00605 PF02357 Transcription termination factor nusG DN409_00610 PF03946 Ribosomal protein L11, N-terminal domain DN409_00610 PF00298 Ribosomal protein L11, RNA binding domain DN409_00630 PF05175 Methyltransferase small domain DN409_00645 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN409_00650 PF00164 Ribosomal protein S12/S23 DN409_00670 PF00338 Ribosomal protein S10p/S20e DN409_00675 PF00297 Ribosomal protein L3 DN409_00705 PF07650 KH domain DN409_00705 PF00189 Ribosomal protein S3, C-terminal domain DN409_00740 PF00253 Ribosomal protein S14p/S29e DN409_00750 PF00347 Ribosomal protein L6 DN409_00760 PF03719 Ribosomal protein S5, C-terminal domain DN409_00760 PF00333 Ribosomal protein S5, N-terminal domain DN409_00775 PF00344 SecY translocase DN409_00785 PF00557 Metallopeptidase family M24 DN409_00790 PF01176 Translation initiation factor 1A / IF-1 DN409_00795 PF00444 Ribosomal protein L36 DN409_00810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN409_00810 PF01000 RNA polymerase Rpb3/RpoA insert domain DN409_00810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN409_00815 PF01196 Ribosomal protein L17 DN409_00820 PF00005 ABC transporter DN409_00825 PF00005 ABC transporter DN409_00830 PF02361 Cobalt transport protein DN409_00835 PF01416 tRNA pseudouridine synthase DN409_00855 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_00860 PF10609 NUBPL iron-transfer P-loop NTPase DN409_00865 PF17898 Spore germination GerD central core domain DN409_00870 PF14089 KinB-signalling pathway activation in sporulation DN409_00875 PF01522 Polysaccharide deacetylase DN409_00945 PF02595 Glycerate kinase family DN409_00950 PF00491 Arginase family DN409_00955 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN409_00960 PF07949 YbbR-like protein DN409_00970 PF01380 SIS domain DN409_00980 PF07676 WD40-like Beta Propeller Repeat DN409_00980 PF00326 Prolyl oligopeptidase family DN409_01010 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01015 PF00005 ABC transporter DN409_01015 PF09383 NIL domain DN409_01020 PF03180 NLPA lipoprotein DN409_01025 PF00107 Zinc-binding dehydrogenase DN409_01025 PF08240 Alcohol dehydrogenase GroES-like domain DN409_01035 PF01565 FAD binding domain DN409_01040 PF07690 Major Facilitator Superfamily DN409_01050 PF07690 Major Facilitator Superfamily DN409_01070 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01075 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01075 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_01080 PF00005 ABC transporter DN409_01080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_01085 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_01085 PF00005 ABC transporter DN409_01090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_01105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_01110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_01115 PF00248 Aldo/keto reductase family DN409_01120 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_01120 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_01125 PF04973 Nicotinamide mononucleotide transporter DN409_01130 PF06800 Sugar transport protein DN409_01135 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01145 PF12728 Helix-turn-helix domain DN409_01145 PF12727 PBP superfamily domain DN409_01155 PF03466 LysR substrate binding domain DN409_01155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_01160 PF00892 EamA-like transporter family DN409_01165 PF14142 YrzO-like protein DN409_01175 PF01553 Acyltransferase DN409_01185 PF00356 Bacterial regulatory proteins, lacI family DN409_01185 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_01195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_01195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_01210 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DN409_01230 PF00005 ABC transporter DN409_01230 PF16326 ABC transporter C-terminal domain DN409_01230 PF12848 ABC transporter DN409_01235 PF07730 Histidine kinase DN409_01245 PF00005 ABC transporter DN409_01265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_01270 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01280 PF00005 ABC transporter DN409_01280 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_01285 PF00005 ABC transporter DN409_01285 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_01320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_01325 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN409_01335 PF13520 Amino acid permease DN409_01340 PF07690 Major Facilitator Superfamily DN409_01345 PF07478 D-ala D-ala ligase C-terminus DN409_01345 PF01820 D-ala D-ala ligase N-terminus DN409_01350 PF08245 Mur ligase middle domain DN409_01350 PF02875 Mur ligase family, glutamate ligase domain DN409_01350 PF01225 Mur ligase family, catalytic domain DN409_01355 PF00271 Helicase conserved C-terminal domain DN409_01355 PF00270 DEAD/DEAH box helicase DN409_01360 PF03851 UV-endonuclease UvdE DN409_01365 PF01694 Rhomboid family DN409_01380 PF01168 Alanine racemase, N-terminal domain DN409_01380 PF00842 Alanine racemase, C-terminal domain DN409_01385 PF01402 Ribbon-helix-helix protein, copG family DN409_01390 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN409_01395 PF17674 HHH domain DN409_01395 PF00575 S1 RNA binding domain DN409_01395 PF16921 Tex protein YqgF-like domain DN409_01395 PF09371 Tex-like protein N-terminal domain DN409_01405 PF17283 SprT-like zinc ribbon domain DN409_01405 PF10263 SprT-like family DN409_01495 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN409_01500 PF00814 Glycoprotease family DN409_01505 PF00583 Acetyltransferase (GNAT) family DN409_01510 PF00814 Glycoprotease family DN409_01515 PF12848 ABC transporter DN409_01515 PF16326 ABC transporter C-terminal domain DN409_01515 PF00005 ABC transporter DN409_01530 PF02517 CPBP intramembrane metalloprotease DN409_01550 PF00860 Permease family DN409_01555 PF00486 Transcriptional regulatory protein, C terminal DN409_01555 PF00072 Response regulator receiver domain DN409_01560 PF16736 Single Cache-like DN409_01560 PF00989 PAS fold DN409_01560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_01560 PF00512 His Kinase A (phospho-acceptor) domain DN409_01590 PF01323 DSBA-like thioredoxin domain DN409_01610 PF14307 Glycosyltransferase WbsX DN409_01610 PF05045 Rhamnan synthesis protein F DN409_01620 PF08241 Methyltransferase domain DN409_01640 PF00535 Glycosyl transferase family 2 DN409_01665 PF00155 Aminotransferase class I and II DN409_01665 PF00392 Bacterial regulatory proteins, gntR family DN409_01670 PF01619 Proline dehydrogenase DN409_01690 PF00892 EamA-like transporter family DN409_01720 PF00731 AIR carboxylase DN409_01725 PF02222 ATP-grasp domain DN409_01725 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain DN409_01730 PF10397 Adenylosuccinate lyase C-terminus DN409_01730 PF00206 Lyase DN409_01740 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase DN409_01755 PF00156 Phosphoribosyl transferase domain DN409_01765 PF00551 Formyl transferase DN409_01775 PF02843 Phosphoribosylglycinamide synthetase, C domain DN409_01775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN409_01775 PF02844 Phosphoribosylglycinamide synthetase, N domain DN409_01805 PF13361 UvrD-like helicase C-terminal domain DN409_01805 PF00580 UvrD/REP helicase N-terminal domain DN409_01815 PF07537 CamS sex pheromone cAM373 precursor DN409_01820 PF01925 Sulfite exporter TauE/SafE DN409_01830 PF00857 Isochorismatase family DN409_01835 PF00005 ABC transporter DN409_01835 PF09383 NIL domain DN409_01840 PF00528 Binding-protein-dependent transport system inner membrane component DN409_01845 PF03180 NLPA lipoprotein DN409_01860 PF17886 HSP20-like domain found in ArsA DN409_01860 PF02374 Anion-transporting ATPase DN409_01865 PF01047 MarR family DN409_01870 PF05360 yiaA/B two helix domain DN409_01875 PF02686 Glu-tRNAGln amidotransferase C subunit DN409_01890 PF00781 Diacylglycerol kinase catalytic domain DN409_01895 PF13419 Haloacid dehalogenase-like hydrolase DN409_01900 PF00202 Aminotransferase class-III DN409_01905 PF00158 Sigma-54 interaction domain DN409_01910 PF00171 Aldehyde dehydrogenase family DN409_01915 PF00893 Small Multidrug Resistance protein DN409_01920 PF02073 Thermophilic metalloprotease (M29) DN409_01935 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_01935 PF07670 Nucleoside recognition DN409_01935 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_01940 PF13847 Methyltransferase domain DN409_01940 PF01938 TRAM domain DN409_01940 PF05958 tRNA (Uracil-5-)-methyltransferase DN409_01945 PF01207 Dihydrouridine synthase (Dus) DN409_01950 PF00512 His Kinase A (phospho-acceptor) domain DN409_01950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_01950 PF13426 PAS domain DN409_01950 PF13188 PAS domain DN409_01950 PF00989 PAS fold DN409_01955 PF07308 Protein of unknown function (DUF1456) DN409_01970 PF13378 Enolase C-terminal domain-like DN409_01970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_01985 PF01546 Peptidase family M20/M25/M40 DN409_01985 PF07687 Peptidase dimerisation domain DN409_01995 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_01995 PF13192 Thioredoxin domain DN409_02000 PF00578 AhpC/TSA family DN409_02005 PF01636 Phosphotransferase enzyme family DN409_02015 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_02020 PF01032 FecCD transport family DN409_02025 PF01032 FecCD transport family DN409_02030 PF01497 Periplasmic binding protein DN409_02055 PF12728 Helix-turn-helix domain DN409_02080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_02080 PF00512 His Kinase A (phospho-acceptor) domain DN409_02080 PF00989 PAS fold DN409_02080 PF13188 PAS domain DN409_02080 PF13426 PAS domain DN409_02100 PF10127 RNA repair pathway DNA polymerase beta family DN409_02105 PF01266 FAD dependent oxidoreductase DN409_02105 PF00355 Rieske [2Fe-2S] domain DN409_02115 PF00528 Binding-protein-dependent transport system inner membrane component DN409_02120 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_02125 PF00005 ABC transporter DN409_02130 PF00672 HAMP domain DN409_02130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_02130 PF02743 Cache domain DN409_02135 PF01565 FAD binding domain DN409_02135 PF08031 Berberine and berberine like DN409_02140 PF00128 Alpha amylase, catalytic domain DN409_02140 PF16657 Maltogenic Amylase, C-terminal domain DN409_02145 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_02145 PF00367 phosphotransferase system, EIIB DN409_02145 PF02378 Phosphotransferase system, EIIC DN409_02150 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_02155 PF01061 ABC-2 type transporter DN409_02160 PF01131 DNA topoisomerase DN409_02160 PF01751 Toprim domain DN409_02170 PF02581 Thiamine monophosphate synthase DN409_02175 PF03605 Anaerobic c4-dicarboxylate membrane transporter DN409_02180 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_02180 PF00672 HAMP domain DN409_02185 PF01910 Thiamine-binding protein DN409_02190 PF00528 Binding-protein-dependent transport system inner membrane component DN409_02200 PF00005 ABC transporter DN409_02205 PF00005 ABC transporter DN409_02205 PF12848 ABC transporter DN409_02210 PF00704 Glycosyl hydrolases family 18 DN409_02210 PF00041 Fibronectin type III domain DN409_02240 PF11700 Vacuole effluxer Atg22 like DN409_02255 PF09180 Prolyl-tRNA synthetase, C-terminal DN409_02255 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_02255 PF03129 Anticodon binding domain DN409_02265 PF00480 ROK family DN409_02270 PF02342 TerD domain DN409_02275 PF02342 TerD domain DN409_02280 PF02342 TerD domain DN409_02285 PF03741 Integral membrane protein TerC family DN409_02290 PF14266 Putative component of 'biosynthetic module' DN409_02295 PF05816 Toxic anion resistance protein (TelA) DN409_02300 PF00690 Cation transporter/ATPase, N-terminus DN409_02300 PF00689 Cation transporting ATPase, C-terminus DN409_02310 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN409_02320 PF03631 Virulence factor BrkB DN409_02330 PF00892 EamA-like transporter family DN409_02340 PF10502 Signal peptidase, peptidase S26 DN409_02355 PF09335 SNARE associated Golgi protein DN409_02370 PF16242 Pyridoxamine 5'-phosphate oxidase like DN409_02375 PF01699 Sodium/calcium exchanger protein DN409_02380 PF14167 YfkD-like protein DN409_02385 PF04055 Radical SAM superfamily DN409_02385 PF08756 YfkB-like domain DN409_02395 PF05681 Fumarate hydratase (Fumerase) DN409_02395 PF05683 Fumarase C-terminus DN409_02400 PF01522 Polysaccharide deacetylase DN409_02405 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_02410 PF05958 tRNA (Uracil-5-)-methyltransferase DN409_02410 PF01938 TRAM domain DN409_02415 PF01416 tRNA pseudouridine synthase DN409_02425 PF00158 Sigma-54 interaction domain DN409_02425 PF13426 PAS domain DN409_02425 PF02954 Bacterial regulatory protein, Fis family DN409_02435 PF00324 Amino acid permease DN409_02440 PF07687 Peptidase dimerisation domain DN409_02440 PF01546 Peptidase family M20/M25/M40 DN409_02470 PF02378 Phosphotransferase system, EIIC DN409_02470 PF00367 phosphotransferase system, EIIB DN409_02475 PF00144 Beta-lactamase DN409_02490 PF00535 Glycosyl transferase family 2 DN409_02495 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_02495 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_02495 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_02500 PF00551 Formyl transferase DN409_02500 PF02911 Formyl transferase, C-terminal domain DN409_02500 PF01370 NAD dependent epimerase/dehydratase family DN409_02505 PF00535 Glycosyl transferase family 2 DN409_02515 PF02901 Pyruvate formate lyase-like DN409_02515 PF01228 Glycine radical DN409_02520 PF04055 Radical SAM superfamily DN409_02540 PF01979 Amidohydrolase family DN409_02545 PF01370 NAD dependent epimerase/dehydratase family DN409_02545 PF08338 Domain of unknown function (DUF1731) DN409_02565 PF08176 Small acid-soluble spore protein K family DN409_02570 PF14043 WVELL protein DN409_02575 PF04307 LexA-binding, inner membrane-associated putative hydrolase DN409_02580 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_02580 PF14815 NUDIX domain DN409_02585 PF04259 Small, acid-soluble spore protein, gamma-type DN409_02595 PF14182 YgaB-like protein DN409_02605 PF00664 ABC transporter transmembrane region DN409_02605 PF00005 ABC transporter DN409_02610 PF06081 Aromatic acid exporter family member 1 DN409_02615 PF04898 Glutamate synthase central domain DN409_02615 PF00310 Glutamine amidotransferases class-II DN409_02615 PF01645 Conserved region in glutamate synthase DN409_02615 PF01493 GXGXG motif DN409_02625 PF00005 ABC transporter DN409_02640 PF07885 Ion channel DN409_02645 PF00578 AhpC/TSA family DN409_02650 PF01475 Ferric uptake regulator family DN409_02655 PF11023 Zinc-ribbon containing domain DN409_02760 PF01709 Transcriptional regulator DN409_02765 PF13344 Haloacid dehalogenase-like hydrolase DN409_02765 PF00293 NUDIX domain DN409_02770 PF00912 Transglycosylase DN409_02770 PF00905 Penicillin binding protein transpeptidase domain DN409_02775 PF13462 Thioredoxin DN409_02785 PF08331 Domain of unknown function (DUF1730) DN409_02790 PF12671 Putative amidase domain DN409_02795 PF00588 SpoU rRNA Methylase family DN409_02800 PF00990 Diguanylate cyclase, GGDEF domain DN409_02800 PF03707 Bacterial signalling protein N terminal repeat DN409_02800 PF00563 EAL domain DN409_02805 PF08298 PrkA AAA domain DN409_02805 PF06798 PrkA serine protein kinase C-terminal domain DN409_02820 PF18496 Collagenase G catalytic helper subdomain DN409_02820 PF01752 Collagenase DN409_02820 PF08453 Peptidase family M9 N-terminal DN409_02830 PF01145 SPFH domain / Band 7 family DN409_02830 PF15975 Flotillin DN409_02835 PF02743 Cache domain DN409_02835 PF00672 HAMP domain DN409_02835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_02840 PF00989 PAS fold DN409_02840 PF17203 Single cache domain 3 DN409_02840 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_02840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_02845 PF12431 Transcriptional regulator DN409_02845 PF00072 Response regulator receiver domain DN409_02850 PF03600 Citrate transporter DN409_02875 PF04309 Glycerol-3-phosphate responsive antiterminator DN409_02880 PF17912 MalK OB fold domain DN409_02880 PF00005 ABC transporter DN409_02885 PF00528 Binding-protein-dependent transport system inner membrane component DN409_02890 PF00528 Binding-protein-dependent transport system inner membrane component DN409_02895 PF13416 Bacterial extracellular solute-binding protein DN409_02900 PF00149 Calcineurin-like phosphoesterase DN409_02905 PF00486 Transcriptional regulatory protein, C terminal DN409_02905 PF00072 Response regulator receiver domain DN409_02910 PF00512 His Kinase A (phospho-acceptor) domain DN409_02910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_02920 PF13529 Peptidase_C39 like family DN409_02925 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_02925 PF02743 Cache domain DN409_02925 PF00672 HAMP domain DN409_02930 PF17203 Single cache domain 3 DN409_02930 PF00989 PAS fold DN409_02930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_02935 PF00072 Response regulator receiver domain DN409_02940 PF03390 2-hydroxycarboxylate transporter family DN409_02945 PF00390 Malic enzyme, N-terminal domain DN409_02945 PF03949 Malic enzyme, NAD binding domain DN409_02955 PF00892 EamA-like transporter family DN409_02960 PF00155 Aminotransferase class I and II DN409_02960 PF00392 Bacterial regulatory proteins, gntR family DN409_02970 PF18698 Histidine kinase sensor domain DN409_02970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_02970 PF00672 HAMP domain DN409_02970 PF00512 His Kinase A (phospho-acceptor) domain DN409_02970 PF00989 PAS fold DN409_02975 PF00486 Transcriptional regulatory protein, C terminal DN409_02975 PF00072 Response regulator receiver domain DN409_02980 PF13508 Acetyltransferase (GNAT) domain DN409_02980 PF00583 Acetyltransferase (GNAT) family DN409_02985 PF02634 FdhD/NarQ family DN409_02990 PF01568 Molydopterin dinucleotide binding domain DN409_02990 PF00384 Molybdopterin oxidoreductase DN409_02990 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN409_02990 PF00037 4Fe-4S binding domain DN409_02990 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN409_03005 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_03005 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN409_03010 PF13520 Amino acid permease DN409_03020 PF01022 Bacterial regulatory protein, arsR family DN409_03025 PF00403 Heavy-metal-associated domain DN409_03030 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN409_03030 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN409_03030 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN409_03040 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_03040 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_03040 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_03040 PF03413 Peptidase propeptide and YPEB domain DN409_03060 PF04294 VanW like protein DN409_03065 PF03816 Cell envelope-related transcriptional attenuator domain DN409_03070 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_03070 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_03075 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_03080 PF03471 Transporter associated domain DN409_03080 PF01595 Cyclin M transmembrane N-terminal domain DN409_03080 PF00571 CBS domain DN409_03085 PF10415 Fumarase C C-terminus DN409_03085 PF00206 Lyase DN409_03090 PF02652 L-lactate permease DN409_03095 PF00578 AhpC/TSA family DN409_03105 PF01022 Bacterial regulatory protein, arsR family DN409_03110 PF08141 Small acid-soluble spore protein H family DN409_03115 PF00854 POT family DN409_03120 PF01497 Periplasmic binding protein DN409_03125 PF01032 FecCD transport family DN409_03130 PF01032 FecCD transport family DN409_03135 PF00005 ABC transporter DN409_03140 PF08003 Protein of unknown function (DUF1698) DN409_03145 PF00155 Aminotransferase class I and II DN409_03150 PF01370 NAD dependent epimerase/dehydratase family DN409_03155 PF00293 NUDIX domain DN409_03155 PF13344 Haloacid dehalogenase-like hydrolase DN409_03160 PF00092 von Willebrand factor type A domain DN409_03165 PF07728 AAA domain (dynein-related subfamily) DN409_03170 PF13396 Phospholipase_D-nuclease N-terminal DN409_03170 PF13091 PLD-like domain DN409_03180 PF00990 Diguanylate cyclase, GGDEF domain DN409_03180 PF03707 Bacterial signalling protein N terminal repeat DN409_03180 PF00563 EAL domain DN409_03185 PF13520 Amino acid permease DN409_03190 PF00392 Bacterial regulatory proteins, gntR family DN409_03190 PF07702 UTRA domain DN409_03200 PF00367 phosphotransferase system, EIIB DN409_03200 PF02378 Phosphotransferase system, EIIC DN409_03205 PF16657 Maltogenic Amylase, C-terminal domain DN409_03205 PF00128 Alpha amylase, catalytic domain DN409_03220 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_03225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_03225 PF07730 Histidine kinase DN409_03225 PF13492 GAF domain DN409_03230 PF00072 Response regulator receiver domain DN409_03230 PF00196 Bacterial regulatory proteins, luxR family DN409_03235 PF05922 Peptidase inhibitor I9 DN409_03235 PF02225 PA domain DN409_03235 PF00082 Subtilase family DN409_03235 PF13860 FlgD Ig-like domain DN409_03240 PF12389 Camelysin metallo-endopeptidase DN409_03250 PF01636 Phosphotransferase enzyme family DN409_03255 PF01235 Sodium:alanine symporter family DN409_03260 PF00005 ABC transporter DN409_03265 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_03270 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03275 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03280 PF00324 Amino acid permease DN409_03310 PF08279 HTH domain DN409_03310 PF13280 WYL domain DN409_03315 PF01872 RibD C-terminal domain DN409_03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_03320 PF00672 HAMP domain DN409_03320 PF00512 His Kinase A (phospho-acceptor) domain DN409_03320 PF00989 PAS fold DN409_03320 PF18698 Histidine kinase sensor domain DN409_03325 PF00072 Response regulator receiver domain DN409_03325 PF00486 Transcriptional regulatory protein, C terminal DN409_03335 PF00916 Sulfate permease family DN409_03335 PF01740 STAS domain DN409_03340 PF00582 Universal stress protein family DN409_03350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_03355 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03360 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03365 PF00005 ABC transporter DN409_03365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_03370 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_03370 PF00005 ABC transporter DN409_03375 PF07690 Major Facilitator Superfamily DN409_03380 PF01047 MarR family DN409_03385 PF07690 Major Facilitator Superfamily DN409_03390 PF00356 Bacterial regulatory proteins, lacI family DN409_03395 PF00294 pfkB family carbohydrate kinase DN409_03405 PF00005 ABC transporter DN409_03410 PF02653 Branched-chain amino acid transport system / permease component DN409_03415 PF13407 Periplasmic binding protein domain DN409_03420 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN409_03425 PF05547 Immune inhibitor A peptidase M6 DN409_03440 PF07690 Major Facilitator Superfamily DN409_03445 PF00107 Zinc-binding dehydrogenase DN409_03445 PF08240 Alcohol dehydrogenase GroES-like domain DN409_03455 PF00882 Zinc dependent phospholipase C DN409_03460 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_03485 PF02673 Bacitracin resistance protein BacA DN409_03490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_03490 PF00672 HAMP domain DN409_03490 PF02743 Cache domain DN409_03495 PF06725 3D domain DN409_03495 PF03990 G5-linked-Ubiquitin-like domain DN409_03495 PF07501 G5 domain DN409_03500 PF01381 Helix-turn-helix DN409_03510 PF04203 Sortase domain DN409_03520 PF00854 POT family DN409_03525 PF05525 Branched-chain amino acid transport protein DN409_03540 PF00324 Amino acid permease DN409_03545 PF00860 Permease family DN409_03560 PF13673 Acetyltransferase (GNAT) domain DN409_03570 PF00999 Sodium/hydrogen exchanger family DN409_03570 PF02254 TrkA-N domain DN409_03570 PF02080 TrkA-C domain DN409_03585 PF00510 Cytochrome c oxidase subunit III DN409_03590 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN409_03595 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN409_03600 PF00324 Amino acid permease DN409_03605 PF13529 Peptidase_C39 like family DN409_03610 PF07687 Peptidase dimerisation domain DN409_03610 PF01546 Peptidase family M20/M25/M40 DN409_03615 PF11755 Protein of unknown function (DUF3311) DN409_03620 PF00474 Sodium:solute symporter family DN409_03625 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_03630 PF03845 Spore germination protein DN409_03635 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_03640 PF02421 Ferrous iron transport protein B DN409_03640 PF17910 FeoB cytosolic helical domain DN409_03640 PF07670 Nucleoside recognition DN409_03640 PF07664 Ferrous iron transport protein B C terminus DN409_03645 PF17910 FeoB cytosolic helical domain DN409_03645 PF02421 Ferrous iron transport protein B DN409_03645 PF07670 Nucleoside recognition DN409_03645 PF07664 Ferrous iron transport protein B C terminus DN409_03655 PF12849 PBP superfamily domain DN409_03660 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03665 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03675 PF00873 AcrB/AcrD/AcrF family DN409_03795 PF00571 CBS domain DN409_03810 PF08239 Bacterial SH3 domain DN409_03810 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_03815 PF03070 TENA/THI-4/PQQC family DN409_03820 PF00005 ABC transporter DN409_03825 PF00528 Binding-protein-dependent transport system inner membrane component DN409_03830 PF09084 NMT1/THI5 like DN409_03835 PF02581 Thiamine monophosphate synthase DN409_03840 PF01266 FAD dependent oxidoreductase DN409_03845 PF02597 ThiS family DN409_03855 PF00899 ThiF family DN409_03860 PF08543 Phosphomethylpyrimidine kinase DN409_03900 PF02702 Osmosensitive K+ channel His kinase sensor domain DN409_03905 PF07690 Major Facilitator Superfamily DN409_03910 PF01047 MarR family DN409_03920 PF02653 Branched-chain amino acid transport system / permease component DN409_03925 PF00005 ABC transporter DN409_03930 PF13407 Periplasmic binding protein domain DN409_03935 PF00860 Permease family DN409_03945 PF03734 L,D-transpeptidase catalytic domain DN409_03945 PF17969 L,D-transpeptidase C-terminal domain DN409_03960 PF00085 Thioredoxin DN409_03965 PF02600 Disulfide bond formation protein DsbB DN409_03970 PF14148 YhdB-like protein DN409_03980 PF03845 Spore germination protein DN409_03990 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_04000 PF00881 Nitroreductase family DN409_04005 PF04293 SpoVR like protein DN409_04030 PF02583 Metal-sensitive transcriptional repressor DN409_04035 PF01206 Sulfurtransferase TusA DN409_04035 PF00581 Rhodanese-like domain DN409_04040 PF00753 Metallo-beta-lactamase superfamily DN409_04040 PF00581 Rhodanese-like domain DN409_04045 PF01206 Sulfurtransferase TusA DN409_04050 PF00581 Rhodanese-like domain DN409_04050 PF01206 Sulfurtransferase TusA DN409_04055 PF13686 DsrE/DsrF/DrsH-like family DN409_04060 PF01925 Sulfite exporter TauE/SafE DN409_04070 PF03816 Cell envelope-related transcriptional attenuator domain DN409_04075 PF08240 Alcohol dehydrogenase GroES-like domain DN409_04075 PF00107 Zinc-binding dehydrogenase DN409_04080 PF02690 Na+/Pi-cotransporter DN409_04090 PF07690 Major Facilitator Superfamily DN409_04105 PF00874 PRD domain DN409_04105 PF05043 Mga helix-turn-helix domain DN409_04105 PF08279 HTH domain DN409_04105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN409_04110 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_04115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_04120 PF02378 Phosphotransferase system, EIIC DN409_04135 PF06725 3D domain DN409_04135 PF01476 LysM domain DN409_04140 PF02687 FtsX-like permease family DN409_04140 PF12704 MacB-like periplasmic core domain DN409_04145 PF00005 ABC transporter DN409_04155 PF09529 Integral membrane protein (intg_mem_TP0381) DN409_04170 PF02687 FtsX-like permease family DN409_04175 PF05525 Branched-chain amino acid transport protein DN409_04180 PF05067 Manganese containing catalase DN409_04185 PF12652 CotJB protein DN409_04190 PF11007 Spore coat associated protein JA (CotJA) DN409_04210 PF09335 SNARE associated Golgi protein DN409_04240 PF13520 Amino acid permease DN409_04245 PF00999 Sodium/hydrogen exchanger family DN409_04255 PF01418 Helix-turn-helix domain, rpiR family DN409_04255 PF01380 SIS domain DN409_04265 PF02378 Phosphotransferase system, EIIC DN409_04265 PF00367 phosphotransferase system, EIIB DN409_04275 PF07681 DoxX DN409_04295 PF00892 EamA-like transporter family DN409_04300 PF01037 Lrp/AsnC ligand binding domain DN409_04310 PF00106 short chain dehydrogenase DN409_04315 PF13411 MerR HTH family regulatory protein DN409_04320 PF00893 Small Multidrug Resistance protein DN409_04325 PF00893 Small Multidrug Resistance protein DN409_04330 PF17934 Tetracyclin repressor-like, C-terminal domain DN409_04330 PF00440 Bacterial regulatory proteins, tetR family DN409_04335 PF07690 Major Facilitator Superfamily DN409_04340 PF01638 HxlR-like helix-turn-helix DN409_04350 PF02525 Flavodoxin-like fold DN409_04360 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_04360 PF12793 Sugar transport-related sRNA regulator N-term DN409_04365 PF07690 Major Facilitator Superfamily DN409_04375 PF01965 DJ-1/PfpI family DN409_04385 PF13520 Amino acid permease DN409_04390 PF00171 Aldehyde dehydrogenase family DN409_04405 PF00005 ABC transporter DN409_04405 PF00664 ABC transporter transmembrane region DN409_04410 PF00005 ABC transporter DN409_04410 PF00664 ABC transporter transmembrane region DN409_04415 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_04420 PF00528 Binding-protein-dependent transport system inner membrane component DN409_04425 PF00005 ABC transporter DN409_04430 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_04440 PF14398 YheC/D like ATP-grasp DN409_04470 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_04470 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_04470 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_04475 PF03306 Alpha-acetolactate decarboxylase DN409_04480 PF00535 Glycosyl transferase family 2 DN409_04485 PF00535 Glycosyl transferase family 2 DN409_04500 PF10425 C-terminus of bacterial fibrinogen-binding adhesin DN409_04500 PF00746 LPXTG cell wall anchor motif DN409_04500 PF17961 Bacterial Ig domain DN409_04500 PF04650 YSIRK type signal peptide DN409_04500 PF17210 SdrD B-like domain DN409_04505 PF04055 Radical SAM superfamily DN409_04510 PF13193 AMP-binding enzyme C-terminal domain DN409_04510 PF00501 AMP-binding enzyme DN409_04515 PF09335 SNARE associated Golgi protein DN409_04525 PF06445 GyrI-like small molecule binding domain DN409_04525 PF13411 MerR HTH family regulatory protein DN409_04535 PF00916 Sulfate permease family DN409_04535 PF01740 STAS domain DN409_04550 PF01043 SecA preprotein cross-linking domain DN409_04550 PF07516 SecA Wing and Scaffold domain DN409_04550 PF07517 SecA DEAD-like domain DN409_04555 PF01943 Polysaccharide biosynthesis protein DN409_04555 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_04565 PF02368 Bacterial Ig-like domain (group 2) DN409_04565 PF00395 S-layer homology domain DN409_04565 PF13205 Bacterial Ig-like domain DN409_04570 PF00395 S-layer homology domain DN409_04580 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_04595 PF00378 Enoyl-CoA hydratase/isomerase DN409_04610 PF05343 M42 glutamyl aminopeptidase DN409_04615 PF00395 S-layer homology domain DN409_04615 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_04625 PF05163 DinB family DN409_04630 PF11121 Protein of unknown function (DUF2639) DN409_04640 PF08943 CsiD DN409_04645 PF01266 FAD dependent oxidoreductase DN409_04660 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN409_04675 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_04680 PF00528 Binding-protein-dependent transport system inner membrane component DN409_04685 PF00528 Binding-protein-dependent transport system inner membrane component DN409_04685 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_04690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_04690 PF00005 ABC transporter DN409_04695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_04695 PF00005 ABC transporter DN409_04715 PF00083 Sugar (and other) transporter DN409_04720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_04720 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_04725 PF12431 Transcriptional regulator DN409_04725 PF00072 Response regulator receiver domain DN409_04725 PF08279 HTH domain DN409_04730 PF03401 Tripartite tricarboxylate transporter family receptor DN409_04745 PF02976 DNA mismatch repair enzyme MutH DN409_04750 PF02976 DNA mismatch repair enzyme MutH DN409_04755 PF00145 C-5 cytosine-specific DNA methylase DN409_04760 PF04851 Type III restriction enzyme, res subunit DN409_04760 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DN409_04760 PF08463 EcoEI R protein C-terminal DN409_04760 PF00271 Helicase conserved C-terminal domain DN409_04810 PF00772 DnaB-like helicase N terminal domain DN409_04810 PF03796 DnaB-like helicase C terminal domain DN409_04830 PF04012 PspA/IM30 family DN409_04840 PF07690 Major Facilitator Superfamily DN409_04880 PF01066 CDP-alcohol phosphatidyltransferase DN409_04940 PF01337 Barstar (barnase inhibitor) DN409_04945 PF07690 Major Facilitator Superfamily DN409_04970 PF09680 Family of unknown function DN409_04975 PF02733 Dak1 domain DN409_04995 PF02733 Dak1 domain DN409_05000 PF02525 Flavodoxin-like fold DN409_05005 PF02082 Transcriptional regulator DN409_05010 PF02734 DAK2 domain DN409_05030 PF00296 Luciferase-like monooxygenase DN409_05040 PF05547 Immune inhibitor A peptidase M6 DN409_05045 PF04294 VanW like protein DN409_05055 PF00395 S-layer homology domain DN409_05075 PF00282 Pyridoxal-dependent decarboxylase conserved domain DN409_05095 PF00149 Calcineurin-like phosphoesterase DN409_05095 PF00746 LPXTG cell wall anchor motif DN409_05095 PF02872 5'-nucleotidase, C-terminal domain DN409_05095 PF00565 Staphylococcal nuclease homologue DN409_05140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN409_05155 PF01906 Putative heavy-metal-binding DN409_05165 PF07690 Major Facilitator Superfamily DN409_05170 PF07729 FCD domain DN409_05170 PF00392 Bacterial regulatory proteins, gntR family DN409_05175 PF00107 Zinc-binding dehydrogenase DN409_05175 PF08240 Alcohol dehydrogenase GroES-like domain DN409_05180 PF07730 Histidine kinase DN409_05180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_05185 PF00072 Response regulator receiver domain DN409_05185 PF00196 Bacterial regulatory proteins, luxR family DN409_05200 PF11121 Protein of unknown function (DUF2639) DN409_05215 PF00149 Calcineurin-like phosphoesterase DN409_05220 PF13514 AAA domain DN409_05225 PF01966 HD domain DN409_05225 PF01336 OB-fold nucleic acid binding domain DN409_05230 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_05235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_05240 PF17874 MalT-like TPR region DN409_05240 PF18801 response regulator aspartate phosphatase H, N terminal DN409_05250 PF00561 alpha/beta hydrolase fold DN409_05250 PF08386 TAP-like protein DN409_05255 PF14147 Sporulation protein YhaL DN409_05265 PF01381 Helix-turn-helix DN409_05270 PF04309 Glycerol-3-phosphate responsive antiterminator DN409_05275 PF00230 Major intrinsic protein DN409_05285 PF01266 FAD dependent oxidoreductase DN409_05285 PF16901 C-terminal domain of alpha-glycerophosphate oxidase DN409_05290 PF04542 Sigma-70 region 2 DN409_05290 PF08281 Sigma-70, region 4 DN409_05305 PF13538 UvrD-like helicase C-terminal domain DN409_05335 PF01230 HIT domain DN409_05340 PF00005 ABC transporter DN409_05345 PF05975 Bacterial ABC transporter protein EcsB DN409_05350 PF12787 EcsC protein family DN409_05410 PF00440 Bacterial regulatory proteins, tetR family DN409_05410 PF17934 Tetracyclin repressor-like, C-terminal domain DN409_05415 PF03703 Bacterial PH domain DN409_05420 PF03703 Bacterial PH domain DN409_05460 PF03703 Bacterial PH domain DN409_05465 PF03703 Bacterial PH domain DN409_05470 PF03992 Antibiotic biosynthesis monooxygenase DN409_05475 PF00905 Penicillin binding protein transpeptidase domain DN409_05475 PF00912 Transglycosylase DN409_05510 PF00440 Bacterial regulatory proteins, tetR family DN409_05510 PF17932 Tetracyclin repressor-like, C-terminal domain DN409_05535 PF04893 Yip1 domain DN409_05550 PF00356 Bacterial regulatory proteins, lacI family DN409_05555 PF14149 YhfH-like protein DN409_05560 PF12706 Beta-lactamase superfamily domain DN409_05565 PF10437 Bacterial lipoate protein ligase C-terminus DN409_05565 PF03099 Biotin/lipoate A/B protein ligase family DN409_05575 PF13193 AMP-binding enzyme C-terminal domain DN409_05575 PF00501 AMP-binding enzyme DN409_05585 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_05585 PF00395 S-layer homology domain DN409_05595 PF00528 Binding-protein-dependent transport system inner membrane component DN409_05600 PF00528 Binding-protein-dependent transport system inner membrane component DN409_05605 PF00005 ABC transporter DN409_05605 PF17850 CysA C-terminal regulatory domain DN409_05605 PF12857 TOBE-like domain DN409_05645 PF00149 Calcineurin-like phosphoesterase DN409_05650 PF01966 HD domain DN409_05665 PF04542 Sigma-70 region 2 DN409_05665 PF08281 Sigma-70, region 4 DN409_05675 PF12833 Helix-turn-helix domain DN409_05675 PF06445 GyrI-like small molecule binding domain DN409_05680 PF00512 His Kinase A (phospho-acceptor) domain DN409_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_05685 PF00486 Transcriptional regulatory protein, C terminal DN409_05685 PF00072 Response regulator receiver domain DN409_05705 PF01435 Peptidase family M48 DN409_05705 PF16491 CAAX prenyl protease N-terminal, five membrane helices DN409_05710 PF00892 EamA-like transporter family DN409_05715 PF00150 Cellulase (glycosyl hydrolase family 5) DN409_05715 PF00395 S-layer homology domain DN409_05715 PF03424 Carbohydrate binding domain (family 17/28) DN409_05735 PF00395 S-layer homology domain DN409_05740 PF01274 Malate synthase DN409_05745 PF00463 Isocitrate lyase family DN409_05755 PF00313 'Cold-shock' DNA-binding domain DN409_05775 PF06338 ComK protein DN409_05785 PF09335 SNARE associated Golgi protein DN409_05790 PF10502 Signal peptidase, peptidase S26 DN409_05815 PF10676 Spore germination protein gerPA/gerPF DN409_05820 PF10970 Spore germination protein GerPE DN409_05830 PF10737 Spore germination protein GerPC DN409_05835 PF10803 Spore germination GerPB DN409_05840 PF10676 Spore germination protein gerPA/gerPF DN409_05845 PF09388 Spo0E like sporulation regulatory protein DN409_05850 PF01557 Fumarylacetoacetate (FAA) hydrolase family DN409_05860 PF00202 Aminotransferase class-III DN409_05875 PF00733 Asparagine synthase DN409_05875 PF13537 Glutamine amidotransferase domain DN409_05885 PF06628 Catalase-related immune-responsive DN409_05885 PF00199 Catalase DN409_05890 PF00909 Ammonium Transporter Family DN409_05895 PF00128 Alpha amylase, catalytic domain DN409_05905 PF13509 S1 domain DN409_05905 PF17783 CvfB-like winged helix domain DN409_05920 PF02559 CarD-like/TRCF domain DN409_05955 PF00639 PPIC-type PPIASE domain DN409_05965 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_05965 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_05985 PF14168 YjzC-like protein DN409_05990 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_05990 PF00004 ATPase family associated with various cellular activities (AAA) DN409_05990 PF02861 Clp amino terminal domain, pathogenicity island component DN409_05990 PF07724 AAA domain (Cdc48 subfamily) DN409_05990 PF17871 AAA lid domain DN409_06010 PF10815 ComZ DN409_06015 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_06015 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_06020 PF02801 Beta-ketoacyl synthase, C-terminal domain DN409_06020 PF00109 Beta-ketoacyl synthase, N-terminal domain DN409_06025 PF10026 Predicted Zn-dependent protease (DUF2268) DN409_06045 PF00579 tRNA synthetases class I (W and Y) DN409_06060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_06065 PF00528 Binding-protein-dependent transport system inner membrane component DN409_06070 PF00528 Binding-protein-dependent transport system inner membrane component DN409_06070 PF12911 N-terminal TM domain of oligopeptide transport permease C DN409_06075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_06075 PF00005 ABC transporter DN409_06080 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN409_06080 PF00005 ABC transporter DN409_06085 PF01554 MatE DN409_06090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_06105 PF03960 ArsC family DN409_06110 PF03741 Integral membrane protein TerC family DN409_06115 PF05389 Negative regulator of genetic competence (MecA) DN409_06120 PF13091 PLD-like domain DN409_06120 PF13396 Phospholipase_D-nuclease N-terminal DN409_06130 PF01432 Peptidase family M3 DN409_06130 PF08439 Oligopeptidase F DN409_06140 PF01152 Bacterial-like globin DN409_06145 PF01928 CYTH domain DN409_06155 PF04607 Region found in RelA / SpoT proteins DN409_06160 PF01513 ATP-NAD kinase DN409_06165 PF00849 RNA pseudouridylate synthase DN409_06180 PF01098 Cell cycle protein DN409_06185 PF00535 Glycosyl transferase family 2 DN409_06190 PF08241 Methyltransferase domain DN409_06195 PF05711 Macrocin-O-methyltransferase (TylF) DN409_06205 PF00535 Glycosyl transferase family 2 DN409_06205 PF13181 Tetratricopeptide repeat DN409_06225 PF00483 Nucleotidyl transferase DN409_06230 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase DN409_06235 PF16363 GDP-mannose 4,6 dehydratase DN409_06240 PF04321 RmlD substrate binding domain DN409_06260 PF07098 Protein of unknown function (DUF1360) DN409_06280 PF13361 UvrD-like helicase C-terminal domain DN409_06280 PF00580 UvrD/REP helicase N-terminal domain DN409_06285 PF13673 Acetyltransferase (GNAT) domain DN409_06295 PF00756 Putative esterase DN409_06320 PF02368 Bacterial Ig-like domain (group 2) DN409_06325 PF00474 Sodium:solute symporter family DN409_06345 PF00591 Glycosyl transferase family, a/b domain DN409_06345 PF00117 Glutamine amidotransferase class-I DN409_06345 PF02885 Glycosyl transferase family, helical bundle domain DN409_06380 PF02652 L-lactate permease DN409_06385 PF10042 Uncharacterized conserved protein (DUF2278) DN409_06420 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_06420 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_06435 PF01209 ubiE/COQ5 methyltransferase family DN409_06455 PF02817 e3 binding domain DN409_06455 PF00364 Biotin-requiring enzyme DN409_06455 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_06465 PF01381 Helix-turn-helix DN409_06530 PF00589 Phage integrase family DN409_06530 PF02899 Phage integrase, N-terminal SAM-like domain DN409_06550 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_06550 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_06560 PF12389 Camelysin metallo-endopeptidase DN409_06575 PF12389 Camelysin metallo-endopeptidase DN409_06580 PF01381 Helix-turn-helix DN409_06580 PF08671 Anti-repressor SinI DN409_06590 PF05547 Immune inhibitor A peptidase M6 DN409_06595 PF00171 Aldehyde dehydrogenase family DN409_06600 PF00005 ABC transporter DN409_06600 PF08402 TOBE domain DN409_06605 PF00528 Binding-protein-dependent transport system inner membrane component DN409_06610 PF00528 Binding-protein-dependent transport system inner membrane component DN409_06615 PF13416 Bacterial extracellular solute-binding protein DN409_06625 PF03176 MMPL family DN409_06635 PF00849 RNA pseudouridylate synthase DN409_06635 PF01479 S4 domain DN409_06645 PF00188 Cysteine-rich secretory protein family DN409_06650 PF13183 4Fe-4S dicluster domain DN409_06650 PF02754 Cysteine-rich domain DN409_06655 PF02913 FAD linked oxidases, C-terminal domain DN409_06655 PF01565 FAD binding domain DN409_06660 PF13556 PucR C-terminal helix-turn-helix domain DN409_06660 PF05651 Putative sugar diacid recognition DN409_06660 PF17853 GGDEF-like domain DN409_06670 PF00072 Response regulator receiver domain DN409_06670 PF00486 Transcriptional regulatory protein, C terminal DN409_06675 PF00672 HAMP domain DN409_06675 PF00512 His Kinase A (phospho-acceptor) domain DN409_06675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_06675 PF00989 PAS fold DN409_06675 PF18698 Histidine kinase sensor domain DN409_06680 PF00392 Bacterial regulatory proteins, gntR family DN409_06680 PF07729 FCD domain DN409_06700 PF06750 Bacterial Peptidase A24 N-terminal domain DN409_06700 PF01478 Type IV leader peptidase family DN409_06710 PF01226 Formate/nitrite transporter DN409_06715 PF03741 Integral membrane protein TerC family DN409_06720 PF02386 Cation transport protein DN409_06725 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_06730 PF01575 MaoC like domain DN409_06755 PF00561 alpha/beta hydrolase fold DN409_06765 PF02386 Cation transport protein DN409_06785 PF08402 TOBE domain DN409_06785 PF00005 ABC transporter DN409_06790 PF00528 Binding-protein-dependent transport system inner membrane component DN409_06810 PF00455 DeoR C terminal sensor domain DN409_06810 PF08220 DeoR-like helix-turn-helix domain DN409_06820 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_06830 PF04748 Divergent polysaccharide deacetylase DN409_06835 PF09388 Spo0E like sporulation regulatory protein DN409_06840 PF02743 Cache domain DN409_06840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_06840 PF00512 His Kinase A (phospho-acceptor) domain DN409_06845 PF01047 MarR family DN409_06855 PF12867 DinB superfamily DN409_06860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_06860 PF13426 PAS domain DN409_06860 PF00989 PAS fold DN409_06860 PF13188 PAS domain DN409_06860 PF00512 His Kinase A (phospho-acceptor) domain DN409_06870 PF01242 6-pyruvoyl tetrahydropterin synthase DN409_06875 PF04055 Radical SAM superfamily DN409_06885 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) DN409_06895 PF00583 Acetyltransferase (GNAT) family DN409_06915 PF07972 NrdI Flavodoxin like DN409_06930 PF00268 Ribonucleotide reductase, small chain DN409_06935 PF00324 Amino acid permease DN409_06940 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_06940 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_06955 PF02954 Bacterial regulatory protein, Fis family DN409_06955 PF00072 Response regulator receiver domain DN409_06955 PF00158 Sigma-54 interaction domain DN409_06965 PF00202 Aminotransferase class-III DN409_06970 PF00392 Bacterial regulatory proteins, gntR family DN409_06975 PF00005 ABC transporter DN409_06985 PF00005 ABC transporter DN409_06995 PF02517 CPBP intramembrane metalloprotease DN409_07005 PF01037 Lrp/AsnC ligand binding domain DN409_07015 PF00857 Isochorismatase family DN409_07025 PF02016 LD-carboxypeptidase N-terminal domain DN409_07025 PF17676 LD-carboxypeptidase C-terminal domain DN409_07030 PF03060 Nitronate monooxygenase DN409_07035 PF04914 DltD protein DN409_07045 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_07060 PF01546 Peptidase family M20/M25/M40 DN409_07060 PF07687 Peptidase dimerisation domain DN409_07065 PF00258 Flavodoxin DN409_07090 PF01554 MatE DN409_07095 PF02673 Bacitracin resistance protein BacA DN409_07110 PF01047 MarR family DN409_07120 PF00375 Sodium:dicarboxylate symporter family DN409_07125 PF02386 Cation transport protein DN409_07135 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_07155 PF01063 Amino-transferase class IV DN409_07160 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_07160 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_07160 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_07165 PF01842 ACT domain DN409_07165 PF10369 Small subunit of acetolactate synthase DN409_07170 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN409_07170 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN409_07180 PF00180 Isocitrate/isopropylmalate dehydrogenase DN409_07190 PF00694 Aconitase C-terminal domain DN409_07205 PF00815 Histidinol dehydrogenase DN409_07230 PF01502 Phosphoribosyl-AMP cyclohydrolase DN409_07240 PF02811 PHP domain DN409_07250 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_07250 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_07255 PF01066 CDP-alcohol phosphatidyltransferase DN409_07260 PF00884 Sulfatase DN409_07270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN409_07270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN409_07295 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN409_07295 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN409_07305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_07310 PF01903 CbiX DN409_07320 PF00209 Sodium:neurotransmitter symporter family DN409_07330 PF00375 Sodium:dicarboxylate symporter family DN409_07340 PF03553 Na+/H+ antiporter family DN409_07360 PF09922 Cell wall-active antibiotics response 4TMS YvqF DN409_07365 PF00672 HAMP domain DN409_07365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_07365 PF07730 Histidine kinase DN409_07370 PF00072 Response regulator receiver domain DN409_07370 PF00196 Bacterial regulatory proteins, luxR family DN409_07380 PF05525 Branched-chain amino acid transport protein DN409_07390 PF08241 Methyltransferase domain DN409_07420 PF00970 Oxidoreductase FAD-binding domain DN409_07420 PF00175 Oxidoreductase NAD-binding domain DN409_07420 PF00042 Globin DN409_07435 PF01925 Sulfite exporter TauE/SafE DN409_07440 PF01384 Phosphate transporter family DN409_07445 PF01865 Protein of unknown function DUF47 DN409_07450 PF00912 Transglycosylase DN409_07450 PF00905 Penicillin binding protein transpeptidase domain DN409_07465 PF00989 PAS fold DN409_07465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_07465 PF00512 His Kinase A (phospho-acceptor) domain DN409_07470 PF01904 Protein of unknown function DUF72 DN409_07480 PF00589 Phage integrase family DN409_07485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_07485 PF00512 His Kinase A (phospho-acceptor) domain DN409_07485 PF00989 PAS fold DN409_07485 PF16736 Single Cache-like DN409_07490 PF01048 Phosphorylase superfamily DN409_07500 PF09924 Uncharacterised conserved protein (DUF2156) DN409_07500 PF03706 Lysylphosphatidylglycerol synthase TM region DN409_07515 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_07515 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_07520 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_07520 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_07525 PF07670 Nucleoside recognition DN409_07530 PF07670 Nucleoside recognition DN409_07535 PF01479 S4 domain DN409_07535 PF00849 RNA pseudouridylate synthase DN409_07540 PF00578 AhpC/TSA family DN409_07545 PF05140 ResB-like family DN409_07550 PF01578 Cytochrome C assembly protein DN409_07555 PF00486 Transcriptional regulatory protein, C terminal DN409_07555 PF00072 Response regulator receiver domain DN409_07560 PF00989 PAS fold DN409_07560 PF18698 Histidine kinase sensor domain DN409_07560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_07560 PF00672 HAMP domain DN409_07560 PF00512 His Kinase A (phospho-acceptor) domain DN409_07565 PF01923 Cobalamin adenosyltransferase DN409_07570 PF01551 Peptidase family M23 DN409_07580 PF12822 ECF transporter, substrate-specific component DN409_07595 PF14493 Helix-turn-helix domain DN409_07600 PF00270 DEAD/DEAH box helicase DN409_07600 PF00271 Helicase conserved C-terminal domain DN409_07605 PF02517 CPBP intramembrane metalloprotease DN409_07615 PF00149 Calcineurin-like phosphoesterase DN409_07620 PF02310 B12 binding domain DN409_07620 PF02607 B12 binding domain DN409_07620 PF13411 MerR HTH family regulatory protein DN409_07625 PF05389 Negative regulator of genetic competence (MecA) DN409_07630 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_07630 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_07655 PF17763 Glutaminase/Asparaginase C-terminal domain DN409_07655 PF00710 Asparaginase, N-terminal DN409_07665 PF00575 S1 RNA binding domain DN409_07680 PF14140 YpzI-like protein DN409_07690 PF14045 YIEGIA protein DN409_07715 PF10966 Protein of unknown function (DUF2768) DN409_07725 PF09547 Stage IV sporulation protein A (spore_IV_A) DN409_07730 PF00216 Bacterial DNA-binding protein DN409_07740 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 DN409_07750 PF00348 Polyprenyl synthetase DN409_07755 PF00334 Nucleoside diphosphate kinase DN409_07760 PF01264 Chorismate synthase DN409_07770 PF00155 Aminotransferase class I and II DN409_07775 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_07790 PF10673 Protein of unknown function (DUF2487) DN409_07795 PF00355 Rieske [2Fe-2S] domain DN409_07800 PF00033 Cytochrome b/b6/petB DN409_07805 PF00032 Cytochrome b(C-terminal)/b6/petD DN409_07805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_07815 PF07187 Protein of unknown function (DUF1405) DN409_07825 PF09577 Sporulation protein YpjB (SpoYpjB) DN409_07830 PF04298 Putative neutral zinc metallopeptidase DN409_07840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_07840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_07845 PF03819 MazG nucleotide pyrophosphohydrolase domain DN409_07860 PF02585 GlcNAc-PI de-N-acetylase DN409_07865 PF00534 Glycosyl transferases group 1 DN409_07865 PF13439 Glycosyltransferase Family 4 DN409_07875 PF08279 HTH domain DN409_07875 PF03099 Biotin/lipoate A/B protein ligase family DN409_07875 PF02237 Biotin protein ligase C terminal domain DN409_07890 PF02261 Aspartate decarboxylase DN409_07895 PF13307 Helicase C-terminal domain DN409_07895 PF04851 Type III restriction enzyme, res subunit DN409_07895 PF00929 Exonuclease DN409_07900 PF14084 Protein of unknown function (DUF4264) DN409_07910 PF00155 Aminotransferase class I and II DN409_07915 PF07261 Replication initiation and membrane attachment DN409_07920 PF00633 Helix-hairpin-helix motif DN409_07920 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_07920 PF10576 Iron-sulfur binding domain of endonuclease III DN409_07930 PF00912 Transglycosylase DN409_07930 PF00905 Penicillin binding protein transpeptidase domain DN409_07940 PF10720 Protein of unknown function (DUF2515) DN409_07985 PF01170 Putative RNA methylase family UPF0020 DN409_07985 PF02926 THUMP domain DN409_07995 PF13307 Helicase C-terminal domain DN409_08000 PF02074 Carboxypeptidase Taq (M32) metallopeptidase DN409_08010 PF00557 Metallopeptidase family M24 DN409_08015 PF00156 Phosphoribosyl transferase domain DN409_08020 PF00860 Permease family DN409_08025 PF04235 Protein of unknown function (DUF418) DN409_08030 PF00350 Dynamin family DN409_08040 PF00583 Acetyltransferase (GNAT) family DN409_08045 PF10752 Protein of unknown function (DUF2533) DN409_08050 PF00581 Rhodanese-like domain DN409_08085 PF00689 Cation transporting ATPase, C-terminus DN409_08085 PF00690 Cation transporter/ATPase, N-terminus DN409_08090 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN409_08090 PF01367 5'-3' exonuclease, C-terminal SAM fold DN409_08105 PF18014 Acetyltransferase (GNAT) domain DN409_08105 PF13673 Acetyltransferase (GNAT) domain DN409_08125 PF13456 Reverse transcriptase-like DN409_08130 PF01263 Aldose 1-epimerase DN409_08145 PF10782 Zinc-finger DN409_08155 PF00313 'Cold-shock' DNA-binding domain DN409_08160 PF08892 YqcI/YcgG family DN409_08165 PF01810 LysE type translocator DN409_08180 PF04341 Protein of unknown function, DUF485 DN409_08185 PF00474 Sodium:solute symporter family DN409_08190 PF00202 Aminotransferase class-III DN409_08200 PF00999 Sodium/hydrogen exchanger family DN409_08205 PF13411 MerR HTH family regulatory protein DN409_08205 PF06445 GyrI-like small molecule binding domain DN409_08215 PF04239 Protein of unknown function (DUF421) DN409_08220 PF02698 DUF218 domain DN409_08230 PF00881 Nitroreductase family DN409_08280 PF17209 Hfq protein DN409_08290 PF01618 MotA/TolQ/ExbB proton channel family DN409_08295 PF00691 OmpA family DN409_08295 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN409_08300 PF00072 Response regulator receiver domain DN409_08305 PF02895 Signal transducing histidine kinase, homodimeric domain DN409_08305 PF07194 P2 response regulator binding domain DN409_08305 PF01627 Hpt domain DN409_08305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_08305 PF01584 CheW-like domain DN409_08310 PF04509 CheC-like family DN409_08310 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_08325 PF01739 CheR methyltransferase, SAM binding domain DN409_08325 PF03705 CheR methyltransferase, all-alpha domain DN409_08345 PF00460 Flagella basal body rod protein DN409_08345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_08350 PF00700 Bacterial flagellin C-terminal helical region DN409_08350 PF00669 Bacterial flagellin N-terminal helical region DN409_08375 PF00460 Flagella basal body rod protein DN409_08380 PF00460 Flagella basal body rod protein DN409_08380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_08385 PF02049 Flagellar hook-basal body complex protein FliE DN409_08390 PF08345 Flagellar M-ring protein C-terminal DN409_08390 PF01514 Secretory protein of YscJ/FliF family DN409_08395 PF01706 FliG C-terminal domain DN409_08395 PF14841 FliG middle domain DN409_08395 PF14842 FliG N-terminal domain DN409_08405 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_08405 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN409_08405 PF18269 T3SS EscN ATPase C-terminal domain DN409_08425 PF00460 Flagella basal body rod protein DN409_08425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_08425 PF07559 Flagellar basal body protein FlaE DN409_08440 PF01584 CheW-like domain DN409_08440 PF00072 Response regulator receiver domain DN409_08445 PF12181 DNA binding domain of the motility gene repressor (MogR) DN409_08450 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_08450 PF00395 S-layer homology domain DN409_08455 PF00563 EAL domain DN409_08455 PF00990 Diguanylate cyclase, GGDEF domain DN409_08455 PF03707 Bacterial signalling protein N terminal repeat DN409_08460 PF03741 Integral membrane protein TerC family DN409_08470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DN409_08470 PF00384 Molybdopterin oxidoreductase DN409_08470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN409_08470 PF01568 Molydopterin dinucleotide binding domain DN409_08470 PF00037 4Fe-4S binding domain DN409_08475 PF07849 Protein of unknown function (DUF1641) DN409_08480 PF10057 Uncharacterized conserved protein (DUF2294) DN409_08485 PF02634 FdhD/NarQ family DN409_08490 PF04055 Radical SAM superfamily DN409_08490 PF06463 Molybdenum Cofactor Synthesis C DN409_08495 PF01226 Formate/nitrite transporter DN409_08500 PF00899 ThiF family DN409_08505 PF00994 Probable molybdopterin binding domain DN409_08505 PF03454 MoeA C-terminal region (domain IV) DN409_08505 PF03453 MoeA N-terminal region (domain I and II) DN409_08510 PF02391 MoaE protein DN409_08515 PF02597 ThiS family DN409_08520 PF01967 MoaC family DN409_08525 PF10609 NUBPL iron-transfer P-loop NTPase DN409_08530 PF00669 Bacterial flagellin N-terminal helical region DN409_08530 PF00700 Bacterial flagellin C-terminal helical region DN409_08535 PF00700 Bacterial flagellin C-terminal helical region DN409_08535 PF07196 Flagellin hook IN motif DN409_08535 PF00669 Bacterial flagellin N-terminal helical region DN409_08540 PF01464 Transglycosylase SLT domain DN409_08550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_08550 PF02154 Flagellar motor switch protein FliM DN409_08555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DN409_08555 PF04509 CheC-like family DN409_08565 PF00813 FliP family DN409_08570 PF01313 Bacterial export proteins, family 3 DN409_08580 PF01312 FlhB HrpN YscU SpaS Family DN409_08585 PF00771 FHIPEP family DN409_08590 PF00448 SRP54-type protein, GTPase domain DN409_08595 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DN409_08595 PF00460 Flagella basal body rod protein DN409_08630 PF03992 Antibiotic biosynthesis monooxygenase DN409_08635 PF08141 Small acid-soluble spore protein H family DN409_08645 PF07690 Major Facilitator Superfamily DN409_08660 PF08402 TOBE domain DN409_08660 PF00005 ABC transporter DN409_08670 PF00528 Binding-protein-dependent transport system inner membrane component DN409_08685 PF10787 Uncharacterised protein from bacillus cereus group DN409_08720 PF00561 alpha/beta hydrolase fold DN409_08740 PF13537 Glutamine amidotransferase domain DN409_08740 PF00733 Asparagine synthase DN409_08760 PF01545 Cation efflux family DN409_08760 PF16916 Dimerisation domain of Zinc Transporter DN409_08770 PF07729 FCD domain DN409_08770 PF00392 Bacterial regulatory proteins, gntR family DN409_08775 PF00892 EamA-like transporter family DN409_08780 PF00535 Glycosyl transferase family 2 DN409_08785 PF03553 Na+/H+ antiporter family DN409_08790 PF10415 Fumarase C C-terminus DN409_08790 PF00206 Lyase DN409_08825 PF01554 MatE DN409_08830 PF03575 Peptidase family S51 DN409_08850 PF02683 Cytochrome C biogenesis protein transmembrane region DN409_08855 PF00578 AhpC/TSA family DN409_08875 PF04286 Protein of unknown function (DUF445) DN409_08905 PF00072 Response regulator receiver domain DN409_08905 PF00196 Bacterial regulatory proteins, luxR family DN409_08910 PF13185 GAF domain DN409_08910 PF13492 GAF domain DN409_08910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_08910 PF07730 Histidine kinase DN409_08915 PF00005 ABC transporter DN409_08935 PF13091 PLD-like domain DN409_08940 PF00696 Amino acid kinase family DN409_08945 PF00375 Sodium:dicarboxylate symporter family DN409_08950 PF00206 Lyase DN409_08950 PF10415 Fumarase C C-terminus DN409_08955 PF00390 Malic enzyme, N-terminal domain DN409_08955 PF03949 Malic enzyme, NAD binding domain DN409_08960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_08965 PF00072 Response regulator receiver domain DN409_08965 PF08664 YcbB domain DN409_08970 PF01047 MarR family DN409_08975 PF07690 Major Facilitator Superfamily DN409_08980 PF00271 Helicase conserved C-terminal domain DN409_08980 PF00176 SNF2 family N-terminal domain DN409_08980 PF04434 SWIM zinc finger DN409_09000 PF01381 Helix-turn-helix DN409_09010 PF13840 ACT domain DN409_09010 PF00696 Amino acid kinase family DN409_09025 PF13761 Domain of unknown function (DUF4166) DN409_09030 PF14158 YndJ-like protein DN409_09035 PF00293 NUDIX domain DN409_09040 PF02368 Bacterial Ig-like domain (group 2) DN409_09040 PF00395 S-layer homology domain DN409_09050 PF07690 Major Facilitator Superfamily DN409_09070 PF03976 Polyphosphate kinase 2 (PPK2) DN409_09080 PF07690 Major Facilitator Superfamily DN409_09090 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_09090 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_09100 PF01926 50S ribosome-binding GTPase DN409_09100 PF13167 GTP-binding GTPase N-terminal DN409_09100 PF16360 GTP-binding GTPase Middle Region DN409_09105 PF07690 Major Facilitator Superfamily DN409_09110 PF00291 Pyridoxal-phosphate dependent enzyme DN409_09125 PF01943 Polysaccharide biosynthesis protein DN409_09125 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_09130 PF00209 Sodium:neurotransmitter symporter family DN409_09135 PF00457 Glycosyl hydrolases family 11 DN409_09135 PF01522 Polysaccharide deacetylase DN409_09135 PF03422 Carbohydrate binding module (family 6) DN409_09145 PF04239 Protein of unknown function (DUF421) DN409_09165 PF01625 Peptide methionine sulfoxide reductase DN409_09170 PF07732 Multicopper oxidase DN409_09170 PF07731 Multicopper oxidase DN409_09170 PF00394 Multicopper oxidase DN409_09180 PF13426 PAS domain DN409_09180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_09180 PF00672 HAMP domain DN409_09180 PF00512 His Kinase A (phospho-acceptor) domain DN409_09185 PF00486 Transcriptional regulatory protein, C terminal DN409_09185 PF00072 Response regulator receiver domain DN409_09200 PF00291 Pyridoxal-phosphate dependent enzyme DN409_09200 PF00585 C-terminal regulatory domain of Threonine dehydratase DN409_09210 PF09587 Bacterial capsule synthesis protein PGA_cap DN409_09225 PF07690 Major Facilitator Superfamily DN409_09230 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase DN409_09260 PF01979 Amidohydrolase family DN409_09285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_09320 PF13302 Acetyltransferase (GNAT) domain DN409_09325 PF00486 Transcriptional regulatory protein, C terminal DN409_09325 PF00072 Response regulator receiver domain DN409_09330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_09330 PF00512 His Kinase A (phospho-acceptor) domain DN409_09340 PF01566 Natural resistance-associated macrophage protein DN409_09355 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN409_09355 PF02558 Ketopantoate reductase PanE/ApbA DN409_09360 PF13520 Amino acid permease DN409_09370 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_09375 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_09395 PF02627 Carboxymuconolactone decarboxylase family DN409_09400 PF13302 Acetyltransferase (GNAT) domain DN409_09415 PF04198 Putative sugar-binding domain DN409_09430 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_09430 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_09435 PF02885 Glycosyl transferase family, helical bundle domain DN409_09435 PF00591 Glycosyl transferase family, a/b domain DN409_09435 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN409_09440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_09450 PF07301 Protein of unknown function (DUF1453) DN409_09455 PF05979 Bacterial protein of unknown function (DUF896) DN409_09470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_09470 PF03466 LysR substrate binding domain DN409_09485 PF00557 Metallopeptidase family M24 DN409_09485 PF05195 Aminopeptidase P, N-terminal domain DN409_09490 PF07732 Multicopper oxidase DN409_09490 PF07731 Multicopper oxidase DN409_09490 PF00394 Multicopper oxidase DN409_09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_09515 PF03466 LysR substrate binding domain DN409_09530 PF02525 Flavodoxin-like fold DN409_09535 PF05525 Branched-chain amino acid transport protein DN409_09550 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_09555 PF11954 Domain of unknown function (DUF3471) DN409_09555 PF00144 Beta-lactamase DN409_09565 PF00975 Thioesterase domain DN409_09570 PF00501 AMP-binding enzyme DN409_09570 PF13193 AMP-binding enzyme C-terminal domain DN409_09570 PF00668 Condensation domain DN409_09570 PF00550 Phosphopantetheine attachment site DN409_09570 PF00975 Thioesterase domain DN409_09575 PF00698 Acyl transferase domain DN409_09575 PF00109 Beta-ketoacyl synthase, N-terminal domain DN409_09575 PF02801 Beta-ketoacyl synthase, C-terminal domain DN409_09575 PF00550 Phosphopantetheine attachment site DN409_09575 PF00668 Condensation domain DN409_09575 PF16197 Ketoacyl-synthetase C-terminal extension DN409_09580 PF00550 Phosphopantetheine attachment site DN409_09580 PF00668 Condensation domain DN409_09580 PF13193 AMP-binding enzyme C-terminal domain DN409_09580 PF00501 AMP-binding enzyme DN409_09585 PF00664 ABC transporter transmembrane region DN409_09585 PF00005 ABC transporter DN409_09590 PF00550 Phosphopantetheine attachment site DN409_09590 PF13193 AMP-binding enzyme C-terminal domain DN409_09590 PF00501 AMP-binding enzyme DN409_09590 PF00668 Condensation domain DN409_09600 PF04234 CopC domain DN409_09600 PF13115 YtkA-like DN409_09600 PF05425 Copper resistance protein D DN409_09605 PF07987 Domain of unkown function (DUF1775) DN409_09615 PF00892 EamA-like transporter family DN409_09620 PF03466 LysR substrate binding domain DN409_09620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_09625 PF02082 Transcriptional regulator DN409_09630 PF01323 DSBA-like thioredoxin domain DN409_09635 PF00881 Nitroreductase family DN409_09645 PF01425 Amidase DN409_09650 PF01594 AI-2E family transporter DN409_09660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_09660 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_09665 PF01593 Flavin containing amine oxidoreductase DN409_09670 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN409_09670 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN409_09680 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN409_09680 PF00005 ABC transporter DN409_09685 PF00005 ABC transporter DN409_09690 PF02653 Branched-chain amino acid transport system / permease component DN409_09700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_09700 PF03466 LysR substrate binding domain DN409_09710 PF14552 Tautomerase enzyme DN409_09720 PF01047 MarR family DN409_09725 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_09735 PF01654 Cytochrome bd terminal oxidase subunit I DN409_09740 PF02322 Cytochrome bd terminal oxidase subunit II DN409_09745 PF00664 ABC transporter transmembrane region DN409_09745 PF00005 ABC transporter DN409_09750 PF00664 ABC transporter transmembrane region DN409_09750 PF00005 ABC transporter DN409_09775 PF17676 LD-carboxypeptidase C-terminal domain DN409_09775 PF02016 LD-carboxypeptidase N-terminal domain DN409_09780 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_09780 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_09795 PF01476 LysM domain DN409_09795 PF00877 NlpC/P60 family DN409_09805 PF00005 ABC transporter DN409_09805 PF00664 ABC transporter transmembrane region DN409_09810 PF00486 Transcriptional regulatory protein, C terminal DN409_09810 PF00072 Response regulator receiver domain DN409_09815 PF16736 Single Cache-like DN409_09815 PF00989 PAS fold DN409_09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_09815 PF00512 His Kinase A (phospho-acceptor) domain DN409_09820 PF00106 short chain dehydrogenase DN409_09830 PF04439 Streptomycin adenylyltransferase DN409_09835 PF11738 Protein of unknown function (DUF3298) DN409_09835 PF13739 Deacetylase PdaC DN409_09835 PF01522 Polysaccharide deacetylase DN409_09840 PF13630 SdpI/YhfL protein family DN409_09855 PF00742 Homoserine dehydrogenase DN409_09855 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_09855 PF01842 ACT domain DN409_09860 PF00291 Pyridoxal-phosphate dependent enzyme DN409_09880 PF03816 Cell envelope-related transcriptional attenuator domain DN409_09890 PF00486 Transcriptional regulatory protein, C terminal DN409_09890 PF00072 Response regulator receiver domain DN409_09895 PF16736 Single Cache-like DN409_09895 PF00989 PAS fold DN409_09895 PF00512 His Kinase A (phospho-acceptor) domain DN409_09895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_09900 PF01522 Polysaccharide deacetylase DN409_09915 PF01385 Probable transposase DN409_09915 PF12323 Helix-turn-helix domain DN409_09915 PF07282 Putative transposase DNA-binding domain DN409_09920 PF02308 MgtC family DN409_09925 PF00583 Acetyltransferase (GNAT) family DN409_09930 PF04183 IucA / IucC family DN409_09930 PF06276 Ferric iron reductase FhuF-like transporter DN409_09935 PF04183 IucA / IucC family DN409_09935 PF06276 Ferric iron reductase FhuF-like transporter DN409_09940 PF00501 AMP-binding enzyme DN409_09940 PF13193 AMP-binding enzyme C-terminal domain DN409_09955 PF01261 Xylose isomerase-like TIM barrel DN409_09960 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_09965 PF07690 Major Facilitator Superfamily DN409_09970 PF01810 LysE type translocator DN409_09975 PF00392 Bacterial regulatory proteins, gntR family DN409_09975 PF00155 Aminotransferase class I and II DN409_09985 PF01734 Patatin-like phospholipase DN409_10010 PF00293 NUDIX domain DN409_10010 PF13344 Haloacid dehalogenase-like hydrolase DN409_10020 PF02687 FtsX-like permease family DN409_10025 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_10025 PF18277 AbrB C-terminal domain DN409_10030 PF00082 Subtilase family DN409_10040 PF03459 TOBE domain DN409_10040 PF00005 ABC transporter DN409_10040 PF17912 MalK OB fold domain DN409_10045 PF13556 PucR C-terminal helix-turn-helix domain DN409_10050 PF12833 Helix-turn-helix domain DN409_10055 PF01547 Bacterial extracellular solute-binding protein DN409_10060 PF00528 Binding-protein-dependent transport system inner membrane component DN409_10065 PF00528 Binding-protein-dependent transport system inner membrane component DN409_10070 PF17386 Lacto-N-biose phosphorylase C-terminal domain DN409_10070 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain DN409_10070 PF17385 Lacto-N-biose phosphorylase central domain DN409_10075 PF00480 ROK family DN409_10080 PF01380 SIS domain DN409_10085 PF01979 Amidohydrolase family DN409_10090 PF00294 pfkB family carbohydrate kinase DN409_10095 PF01791 DeoC/LacD family aldolase DN409_10100 PF04650 YSIRK type signal peptide DN409_10100 PF12905 Endo-alpha-N-acetylgalactosaminidase DN409_10100 PF17451 Glycosyl hydrolase 101 beta sandwich domain DN409_10100 PF17995 Endo-alpha-N-acetylgalactosaminidase N-terminal DN409_10100 PF18080 Galactose mutarotase-like fold domain DN409_10100 PF00754 F5/8 type C domain DN409_10100 PF17974 Galactose-binding domain-like DN409_10110 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DN409_10110 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DN409_10115 PF01022 Bacterial regulatory protein, arsR family DN409_10120 PF00248 Aldo/keto reductase family DN409_10125 PF07690 Major Facilitator Superfamily DN409_10150 PF03193 RsgA GTPase DN409_10155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_10155 PF02743 Cache domain DN409_10155 PF00672 HAMP domain DN409_10175 PF00210 Ferritin-like domain DN409_10190 PF00296 Luciferase-like monooxygenase DN409_10200 PF01593 Flavin containing amine oxidoreductase DN409_10205 PF13302 Acetyltransferase (GNAT) domain DN409_10210 PF00248 Aldo/keto reductase family DN409_10215 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN409_10215 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN409_10220 PF00583 Acetyltransferase (GNAT) family DN409_10225 PF01297 Zinc-uptake complex component A periplasmic DN409_10245 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN409_10245 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN409_10255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_10270 PF00300 Histidine phosphatase superfamily (branch 1) DN409_10280 PF08757 CotH kinase protein DN409_10285 PF00293 NUDIX domain DN409_10290 PF09335 SNARE associated Golgi protein DN409_10295 PF01943 Polysaccharide biosynthesis protein DN409_10295 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_10305 PF03773 Predicted permease DN409_10310 PF09323 Domain of unknown function (DUF1980) DN409_10315 PF03061 Thioesterase superfamily DN409_10325 PF13091 PLD-like domain DN409_10340 PF13460 NAD(P)H-binding DN409_10345 PF04306 Protein of unknown function (DUF456) DN409_10350 PF00571 CBS domain DN409_10350 PF01595 Cyclin M transmembrane N-terminal domain DN409_10350 PF03471 Transporter associated domain DN409_10375 PF05525 Branched-chain amino acid transport protein DN409_10380 PF01588 Putative tRNA binding domain DN409_10400 PF07454 Stage II sporulation protein P (SpoIIP) DN409_10415 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_10420 PF00293 NUDIX domain DN409_10425 PF01425 Amidase DN409_10440 PF01145 SPFH domain / Band 7 family DN409_10445 PF07454 Stage II sporulation protein P (SpoIIP) DN409_10450 PF00300 Histidine phosphatase superfamily (branch 1) DN409_10460 PF01047 MarR family DN409_10465 PF07690 Major Facilitator Superfamily DN409_10475 PF01168 Alanine racemase, N-terminal domain DN409_10475 PF00842 Alanine racemase, C-terminal domain DN409_10480 PF13847 Methyltransferase domain DN409_10495 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_10500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_10500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_10505 PF00392 Bacterial regulatory proteins, gntR family DN409_10505 PF00155 Aminotransferase class I and II DN409_10530 PF00583 Acetyltransferase (GNAT) family DN409_10550 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_10575 PF01209 ubiE/COQ5 methyltransferase family DN409_10580 PF01268 Formate--tetrahydrofolate ligase DN409_10590 PF00270 DEAD/DEAH box helicase DN409_10590 PF00271 Helicase conserved C-terminal domain DN409_10605 PF08240 Alcohol dehydrogenase GroES-like domain DN409_10605 PF00107 Zinc-binding dehydrogenase DN409_10610 PF04542 Sigma-70 region 2 DN409_10610 PF08281 Sigma-70, region 4 DN409_10635 PF01613 Flavin reductase like domain DN409_10635 PF00258 Flavodoxin DN409_10645 PF00255 Glutathione peroxidase DN409_10650 PF13559 Domain of unknown function (DUF4129) DN409_10650 PF11992 Domain of unknown function (DUF3488) DN409_10650 PF01841 Transglutaminase-like superfamily DN409_10655 PF01882 Protein of unknown function DUF58 DN409_10660 PF07726 ATPase family associated with various cellular activities (AAA) DN409_10660 PF17863 AAA lid domain DN409_10665 PF00384 Molybdopterin oxidoreductase DN409_10665 PF01568 Molydopterin dinucleotide binding domain DN409_10665 PF14710 Respiratory nitrate reductase alpha N-terminal DN409_10670 PF14711 Respiratory nitrate reductase beta C-terminal DN409_10670 PF13247 4Fe-4S dicluster domain DN409_10675 PF02613 Nitrate reductase delta subunit DN409_10680 PF02665 Nitrate reductase gamma subunit DN409_10685 PF00027 Cyclic nucleotide-binding domain DN409_10685 PF00325 Bacterial regulatory proteins, crp family DN409_10690 PF06463 Molybdenum Cofactor Synthesis C DN409_10690 PF04055 Radical SAM superfamily DN409_10695 PF00899 ThiF family DN409_10700 PF00994 Probable molybdopterin binding domain DN409_10700 PF03453 MoeA N-terminal region (domain I and II) DN409_10700 PF03454 MoeA C-terminal region (domain IV) DN409_10705 PF02391 MoaE protein DN409_10715 PF07690 Major Facilitator Superfamily DN409_10725 PF04909 Amidohydrolase DN409_10740 PF01903 CbiX DN409_10745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN409_10750 PF00355 Rieske [2Fe-2S] domain DN409_10755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN409_10755 PF04324 BFD-like [2Fe-2S] binding domain DN409_10755 PF18267 Rubredoxin NAD+ reductase C-terminal domain DN409_10755 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_10755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN409_10760 PF04405 Domain of Unknown function (DUF542) DN409_10760 PF01814 Hemerythrin HHE cation binding domain DN409_10785 PF04232 Stage V sporulation protein S (SpoVS) DN409_10795 PF01966 HD domain DN409_10800 PF00005 ABC transporter DN409_10800 PF16326 ABC transporter C-terminal domain DN409_10800 PF12848 ABC transporter DN409_10815 PF00436 Single-strand binding protein family DN409_10825 PF01494 FAD binding domain DN409_10830 PF08712 Scaffold protein Nfu/NifU N terminal DN409_10830 PF13769 Virulence factor DN409_10840 PF06491 Disulphide isomerase DN409_10845 PF04445 Putative SAM-dependent methyltransferase DN409_10850 PF00750 tRNA synthetases class I (R) DN409_10850 PF03485 Arginyl tRNA synthetase N terminal domain DN409_10850 PF05746 DALR anticodon binding domain DN409_10875 PF08264 Anticodon-binding domain of tRNA DN409_10875 PF00133 tRNA synthetases class I (I, L, M and V) DN409_10905 PF01336 OB-fold nucleic acid binding domain DN409_10905 PF00152 tRNA synthetases class II (D, K and N) DN409_10925 PF12538 DNA transporter DN409_10925 PF01580 FtsK/SpoIIIE family DN409_10950 PF04740 LXG domain of WXG superfamily DN409_10950 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH DN409_10970 PF00209 Sodium:neurotransmitter symporter family DN409_10985 PF10997 Alternate to MurJ DN409_10990 PF13419 Haloacid dehalogenase-like hydrolase DN409_11005 PF00465 Iron-containing alcohol dehydrogenase DN409_11010 PF01177 Asp/Glu/Hydantoin racemase DN409_11015 PF01980 tRNA-methyltransferase O DN409_11020 PF00583 Acetyltransferase (GNAT) family DN409_11025 PF08645 Polynucleotide kinase 3 phosphatase DN409_11030 PF00005 ABC transporter DN409_11035 PF05975 Bacterial ABC transporter protein EcsB DN409_11040 PF14005 YpjP-like protein DN409_11045 PF13419 Haloacid dehalogenase-like hydrolase DN409_11065 PF07859 alpha/beta hydrolase fold DN409_11075 PF07282 Putative transposase DNA-binding domain DN409_11075 PF01385 Probable transposase DN409_11075 PF12323 Helix-turn-helix domain DN409_11085 PF00144 Beta-lactamase DN409_11090 PF00303 Thymidylate synthase DN409_11095 PF00186 Dihydrofolate reductase DN409_11100 PF00905 Penicillin binding protein transpeptidase domain DN409_11100 PF03717 Penicillin-binding Protein dimerisation domain DN409_11100 PF05223 NTF2-like N-terminal transpeptidase domain DN409_11105 PF02525 Flavodoxin-like fold DN409_11110 PF01553 Acyltransferase DN409_11115 PF03006 Haemolysin-III related DN409_11125 PF00902 Sec-independent protein translocase protein (TatC) DN409_11135 PF02645 Uncharacterised protein, DegV family COG1307 DN409_11145 PF02630 SCO1/SenC DN409_11150 PF00011 Hsp20/alpha crystallin family DN409_11155 PF13537 Glutamine amidotransferase domain DN409_11155 PF00733 Asparagine synthase DN409_11170 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_11170 PF05036 Sporulation related domain DN409_11175 PF01497 Periplasmic binding protein DN409_11180 PF01063 Amino-transferase class IV DN409_11185 PF00881 Nitroreductase family DN409_11205 PF04740 LXG domain of WXG superfamily DN409_11205 PF14436 Bacterial EndoU nuclease DN409_11215 PF13610 DDE domain DN409_11225 PF07690 Major Facilitator Superfamily DN409_11230 PF01609 Transposase DDE domain DN409_11250 PF00857 Isochorismatase family DN409_11260 PF00924 Mechanosensitive ion channel DN409_11265 PF13185 GAF domain DN409_11265 PF07730 Histidine kinase DN409_11270 PF00196 Bacterial regulatory proteins, luxR family DN409_11270 PF00072 Response regulator receiver domain DN409_11275 PF01418 Helix-turn-helix domain, rpiR family DN409_11275 PF01380 SIS domain DN409_11280 PF08240 Alcohol dehydrogenase GroES-like domain DN409_11280 PF00107 Zinc-binding dehydrogenase DN409_11295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_11295 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_11300 PF02447 GntP family permease DN409_11305 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_11305 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN409_11310 PF03358 NADPH-dependent FMN reductase DN409_11325 PF00571 CBS domain DN409_11325 PF00005 ABC transporter DN409_11330 PF00528 Binding-protein-dependent transport system inner membrane component DN409_11335 PF13520 Amino acid permease DN409_11365 PF03471 Transporter associated domain DN409_11365 PF01595 Cyclin M transmembrane N-terminal domain DN409_11365 PF00571 CBS domain DN409_11370 PF00171 Aldehyde dehydrogenase family DN409_11375 PF07997 Protein of unknown function (DUF1694) DN409_11380 PF09385 Histidine kinase N terminal DN409_11390 PF00202 Aminotransferase class-III DN409_11395 PF01144 Coenzyme A transferase DN409_11400 PF01144 Coenzyme A transferase DN409_11405 PF01546 Peptidase family M20/M25/M40 DN409_11405 PF07687 Peptidase dimerisation domain DN409_11410 PF00583 Acetyltransferase (GNAT) family DN409_11415 PF02954 Bacterial regulatory protein, Fis family DN409_11415 PF13426 PAS domain DN409_11415 PF00158 Sigma-54 interaction domain DN409_11420 PF12544 Lysine-2,3-aminomutase DN409_11425 PF14122 YokU-like protein, putative antitoxin DN409_11445 PF14162 YozD-like protein DN409_11455 PF08239 Bacterial SH3 domain DN409_11455 PF00069 Protein kinase domain DN409_11465 PF01569 PAP2 superfamily DN409_11470 PF01545 Cation efflux family DN409_11470 PF16916 Dimerisation domain of Zinc Transporter DN409_11475 PF00085 Thioredoxin DN409_11570 PF10676 Spore germination protein gerPA/gerPF DN409_11600 PF00912 Transglycosylase DN409_11600 PF00905 Penicillin binding protein transpeptidase domain DN409_11610 PF07690 Major Facilitator Superfamily DN409_11620 PF00285 Citrate synthase, C-terminal domain DN409_11625 PF03972 MmgE/PrpD family DN409_11635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_11635 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_11635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_11640 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN409_11640 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_11650 PF01810 LysE type translocator DN409_11655 PF00378 Enoyl-CoA hydratase/isomerase DN409_11665 PF10763 Protein of unknown function (DUF2584) DN409_11670 PF00149 Calcineurin-like phosphoesterase DN409_11670 PF12320 Type 5 capsule protein repressor C-terminal domain DN409_11675 PF13476 AAA domain DN409_11680 PF01022 Bacterial regulatory protein, arsR family DN409_11690 PF07690 Major Facilitator Superfamily DN409_11695 PF00106 short chain dehydrogenase DN409_11700 PF00425 chorismate binding enzyme DN409_11705 PF13193 AMP-binding enzyme C-terminal domain DN409_11705 PF00501 AMP-binding enzyme DN409_11710 PF00550 Phosphopantetheine attachment site DN409_11710 PF00857 Isochorismatase family DN409_11715 PF00550 Phosphopantetheine attachment site DN409_11715 PF13193 AMP-binding enzyme C-terminal domain DN409_11715 PF00975 Thioesterase domain DN409_11715 PF00668 Condensation domain DN409_11715 PF00501 AMP-binding enzyme DN409_11720 PF03621 MbtH-like protein DN409_11725 PF07690 Major Facilitator Superfamily DN409_11740 PF00216 Bacterial DNA-binding protein DN409_11750 PF05163 DinB family DN409_11755 PF01235 Sodium:alanine symporter family DN409_11770 PF16291 Domain of unknown function (DUF4937 DN409_11785 PF01479 S4 domain DN409_11785 PF00849 RNA pseudouridylate synthase DN409_11790 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_11790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_11790 PF03129 Anticodon binding domain DN409_11790 PF02824 TGS domain DN409_11795 PF13443 Cro/C1-type HTH DNA-binding domain DN409_11800 PF11188 Protein of unknown function (DUF2975) DN409_11805 PF00005 ABC transporter DN409_11815 PF07690 Major Facilitator Superfamily DN409_11830 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_11830 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_11830 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_11860 PF00571 CBS domain DN409_11860 PF03471 Transporter associated domain DN409_11860 PF01595 Cyclin M transmembrane N-terminal domain DN409_11865 PF00753 Metallo-beta-lactamase superfamily DN409_11895 PF00027 Cyclic nucleotide-binding domain DN409_11915 PF01047 MarR family DN409_11930 PF00753 Metallo-beta-lactamase superfamily DN409_11935 PF00440 Bacterial regulatory proteins, tetR family DN409_11940 PF03176 MMPL family DN409_11950 PF00302 Chloramphenicol acetyltransferase DN409_11965 PF00583 Acetyltransferase (GNAT) family DN409_12005 PF00561 alpha/beta hydrolase fold DN409_12020 PF13302 Acetyltransferase (GNAT) domain DN409_12030 PF00313 'Cold-shock' DNA-binding domain DN409_12050 PF03466 LysR substrate binding domain DN409_12050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_12055 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN409_12055 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN409_12115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_12115 PF03466 LysR substrate binding domain DN409_12120 PF00202 Aminotransferase class-III DN409_12125 PF03475 3-alpha domain DN409_12125 PF03473 MOSC domain DN409_12140 PF00005 ABC transporter DN409_12140 PF00664 ABC transporter transmembrane region DN409_12145 PF00005 ABC transporter DN409_12145 PF00664 ABC transporter transmembrane region DN409_12160 PF01810 LysE type translocator DN409_12165 PF01381 Helix-turn-helix DN409_12165 PF07883 Cupin domain DN409_12270 PF00313 'Cold-shock' DNA-binding domain DN409_12305 PF04607 Region found in RelA / SpoT proteins DN409_12305 PF02824 TGS domain DN409_12305 PF13291 ACT domain DN409_12315 PF00890 FAD binding domain DN409_12320 PF04542 Sigma-70 region 2 DN409_12320 PF12680 SnoaL-like domain DN409_12320 PF08281 Sigma-70, region 4 DN409_12325 PF01596 O-methyltransferase DN409_12340 PF02638 Glycosyl hydrolase-like 10 DN409_12350 PF02378 Phosphotransferase system, EIIC DN409_12365 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN409_12370 PF02660 Glycerol-3-phosphate acyltransferase DN409_12375 PF00266 Aminotransferase class-V DN409_12425 PF00271 Helicase conserved C-terminal domain DN409_12425 PF00270 DEAD/DEAH box helicase DN409_12430 PF09313 Domain of unknown function (DUF1971) DN409_12430 PF03848 Tellurite resistance protein TehB DN409_12440 PF01965 DJ-1/PfpI family DN409_12455 PF14171 Toxin SpoIISA, type II toxin-antitoxin system DN409_12485 PF07687 Peptidase dimerisation domain DN409_12485 PF01546 Peptidase family M20/M25/M40 DN409_12490 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_12505 PF00005 ABC transporter DN409_12520 PF00072 Response regulator receiver domain DN409_12520 PF00486 Transcriptional regulatory protein, C terminal DN409_12530 PF00512 His Kinase A (phospho-acceptor) domain DN409_12530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_12540 PF00005 ABC transporter DN409_12545 PF02687 FtsX-like permease family DN409_12545 PF12704 MacB-like periplasmic core domain DN409_12555 PF00486 Transcriptional regulatory protein, C terminal DN409_12555 PF00072 Response regulator receiver domain DN409_12560 PF00512 His Kinase A (phospho-acceptor) domain DN409_12560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_12560 PF00672 HAMP domain DN409_12560 PF00989 PAS fold DN409_12570 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_12570 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_12600 PF00905 Penicillin binding protein transpeptidase domain DN409_12600 PF05223 NTF2-like N-terminal transpeptidase domain DN409_12600 PF03717 Penicillin-binding Protein dimerisation domain DN409_12605 PF00486 Transcriptional regulatory protein, C terminal DN409_12605 PF00072 Response regulator receiver domain DN409_12610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_12615 PF00005 ABC transporter DN409_12620 PF02687 FtsX-like permease family DN409_12630 PF04542 Sigma-70 region 2 DN409_12630 PF08281 Sigma-70, region 4 DN409_12640 PF03717 Penicillin-binding Protein dimerisation domain DN409_12640 PF00905 Penicillin binding protein transpeptidase domain DN409_12665 PF05791 Bacillus haemolytic enterotoxin (HBL) DN409_12680 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_12685 PF00581 Rhodanese-like domain DN409_12685 PF00753 Metallo-beta-lactamase superfamily DN409_12700 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_12730 PF18416 N-acetylglucosamine binding protein domain 2 DN409_12730 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_12735 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_12745 PF00149 Calcineurin-like phosphoesterase DN409_12755 PF00005 ABC transporter DN409_12765 PF08359 YsiA-like protein, C-terminal region DN409_12765 PF00440 Bacterial regulatory proteins, tetR family DN409_12775 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_12775 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_12775 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_12780 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_12780 PF00289 Biotin carboxylase, N-terminal domain DN409_12780 PF02785 Biotin carboxylase C-terminal domain DN409_12785 PF00364 Biotin-requiring enzyme DN409_12790 PF00682 HMGL-like DN409_12795 PF00378 Enoyl-CoA hydratase/isomerase DN409_12800 PF01039 Carboxyl transferase domain DN409_12805 PF16177 Acetyl-coenzyme A synthetase N-terminus DN409_12805 PF00501 AMP-binding enzyme DN409_12805 PF13193 AMP-binding enzyme C-terminal domain DN409_12845 PF00485 Phosphoribulokinase / Uridine kinase family DN409_12850 PF05163 DinB family DN409_12855 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_12855 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_12860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_12860 PF00512 His Kinase A (phospho-acceptor) domain DN409_12865 PF00072 Response regulator receiver domain DN409_12865 PF00486 Transcriptional regulatory protein, C terminal DN409_12875 PF13021 Domain of unknown function (DUF3885) DN409_12880 PF01048 Phosphorylase superfamily DN409_12905 PF00005 ABC transporter DN409_12905 PF17760 UvrA interaction domain DN409_12905 PF17755 UvrA DNA-binding domain DN409_12920 PF00144 Beta-lactamase DN409_12925 PF00376 MerR family regulatory protein DN409_12925 PF09278 MerR, DNA binding DN409_12935 PF01638 HxlR-like helix-turn-helix DN409_12960 PF00440 Bacterial regulatory proteins, tetR family DN409_12965 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_12965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_12975 PF01636 Phosphotransferase enzyme family DN409_12980 PF14525 AraC-binding-like domain DN409_12980 PF12833 Helix-turn-helix domain DN409_12990 PF00892 EamA-like transporter family DN409_12995 PF00155 Aminotransferase class I and II DN409_12995 PF00392 Bacterial regulatory proteins, gntR family DN409_13020 PF00107 Zinc-binding dehydrogenase DN409_13020 PF08240 Alcohol dehydrogenase GroES-like domain DN409_13030 PF04239 Protein of unknown function (DUF421) DN409_13045 PF00392 Bacterial regulatory proteins, gntR family DN409_13045 PF00155 Aminotransferase class I and II DN409_13050 PF00892 EamA-like transporter family DN409_13055 PF01494 FAD binding domain DN409_13060 PF00440 Bacterial regulatory proteins, tetR family DN409_13060 PF02909 Tetracyclin repressor-like, C-terminal domain DN409_13070 PF00344 SecY translocase DN409_13080 PF02872 5'-nucleotidase, C-terminal domain DN409_13080 PF00149 Calcineurin-like phosphoesterase DN409_13085 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_13085 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_13085 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_13085 PF03413 Peptidase propeptide and YPEB domain DN409_13090 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN409_13090 PF03714 Bacterial pullanase-associated domain DN409_13090 PF00128 Alpha amylase, catalytic domain DN409_13100 PF01569 PAP2 superfamily DN409_13120 PF02687 FtsX-like permease family DN409_13120 PF12704 MacB-like periplasmic core domain DN409_13125 PF00005 ABC transporter DN409_13130 PF03845 Spore germination protein DN409_13135 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_13140 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_13155 PF00512 His Kinase A (phospho-acceptor) domain DN409_13155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_13155 PF00989 PAS fold DN409_13155 PF16736 Single Cache-like DN409_13160 PF00486 Transcriptional regulatory protein, C terminal DN409_13160 PF00072 Response regulator receiver domain DN409_13190 PF01266 FAD dependent oxidoreductase DN409_13195 PF01066 CDP-alcohol phosphatidyltransferase DN409_13205 PF00664 ABC transporter transmembrane region DN409_13205 PF00005 ABC transporter DN409_13210 PF00664 ABC transporter transmembrane region DN409_13210 PF00005 ABC transporter DN409_13220 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_13220 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_13220 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_13240 PF01541 GIY-YIG catalytic domain DN409_13250 PF02673 Bacitracin resistance protein BacA DN409_13275 PF08000 Bacterial PH domain DN409_13280 PF01734 Patatin-like phospholipase DN409_13305 PF09234 Domain of unknown function (DUF1963) DN409_13320 PF12706 Beta-lactamase superfamily domain DN409_13330 PF00293 NUDIX domain DN409_13335 PF00712 DNA polymerase III beta subunit, N-terminal domain DN409_13335 PF02768 DNA polymerase III beta subunit, C-terminal domain DN409_13335 PF02767 DNA polymerase III beta subunit, central domain DN409_13340 PF09297 NADH pyrophosphatase zinc ribbon domain DN409_13340 PF00293 NUDIX domain DN409_13350 PF07690 Major Facilitator Superfamily DN409_13365 PF00293 NUDIX domain DN409_13365 PF13344 Haloacid dehalogenase-like hydrolase DN409_13385 PF00892 EamA-like transporter family DN409_13400 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_13415 PF01638 HxlR-like helix-turn-helix DN409_13425 PF07690 Major Facilitator Superfamily DN409_13445 PF00664 ABC transporter transmembrane region DN409_13445 PF00005 ABC transporter DN409_13480 PF01569 PAP2 superfamily DN409_13485 PF00107 Zinc-binding dehydrogenase DN409_13485 PF08240 Alcohol dehydrogenase GroES-like domain DN409_13490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_13490 PF00512 His Kinase A (phospho-acceptor) domain DN409_13490 PF18719 ArlS sensor domain DN409_13495 PF00486 Transcriptional regulatory protein, C terminal DN409_13495 PF00072 Response regulator receiver domain DN409_13515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_13515 PF00512 His Kinase A (phospho-acceptor) domain DN409_13530 PF12558 ATP-binding cassette cobalt transporter DN409_13530 PF00005 ABC transporter DN409_13540 PF01177 Asp/Glu/Hydantoin racemase DN409_13545 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_13560 PF13426 PAS domain DN409_13560 PF13188 PAS domain DN409_13560 PF00989 PAS fold DN409_13560 PF00512 His Kinase A (phospho-acceptor) domain DN409_13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_13595 PF07561 Domain of Unknown Function (DUF1540) DN409_13600 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_13615 PF00067 Cytochrome P450 DN409_13670 PF03070 TENA/THI-4/PQQC family DN409_13675 PF07478 D-ala D-ala ligase C-terminus DN409_13675 PF01820 D-ala D-ala ligase N-terminus DN409_13680 PF00392 Bacterial regulatory proteins, gntR family DN409_13680 PF00155 Aminotransferase class I and II DN409_13685 PF00742 Homoserine dehydrogenase DN409_13685 PF01842 ACT domain DN409_13685 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_13705 PF02687 FtsX-like permease family DN409_13710 PF00005 ABC transporter DN409_13720 PF07690 Major Facilitator Superfamily DN409_13725 PF01609 Transposase DDE domain DN409_13750 PF00248 Aldo/keto reductase family DN409_13755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_13755 PF03466 LysR substrate binding domain DN409_13780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_13785 PF00072 Response regulator receiver domain DN409_13785 PF00486 Transcriptional regulatory protein, C terminal DN409_13795 PF07486 Cell Wall Hydrolase DN409_13800 PF08240 Alcohol dehydrogenase GroES-like domain DN409_13800 PF00107 Zinc-binding dehydrogenase DN409_13805 PF00561 alpha/beta hydrolase fold DN409_13840 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN409_13845 PF03413 Peptidase propeptide and YPEB domain DN409_13845 PF14620 YpeB sporulation DN409_13850 PF01471 Putative peptidoglycan binding domain DN409_13850 PF07486 Cell Wall Hydrolase DN409_13855 PF13028 Protein of unknown function (DUF3889) DN409_13885 PF00440 Bacterial regulatory proteins, tetR family DN409_13885 PF08359 YsiA-like protein, C-terminal region DN409_13900 PF00158 Sigma-54 interaction domain DN409_13900 PF02954 Bacterial regulatory protein, Fis family DN409_13900 PF01590 GAF domain DN409_13915 PF00455 DeoR C terminal sensor domain DN409_13915 PF08220 DeoR-like helix-turn-helix domain DN409_13935 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_13935 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_13940 PF00364 Biotin-requiring enzyme DN409_13940 PF02817 e3 binding domain DN409_13940 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_13945 PF02779 Transketolase, pyrimidine binding domain DN409_13945 PF02780 Transketolase, C-terminal domain DN409_13950 PF00676 Dehydrogenase E1 component DN409_13965 PF12833 Helix-turn-helix domain DN409_13965 PF02311 AraC-like ligand binding domain DN409_13970 PF00106 short chain dehydrogenase DN409_13975 PF04229 GrpB protein DN409_13975 PF13673 Acetyltransferase (GNAT) domain DN409_14010 PF00528 Binding-protein-dependent transport system inner membrane component DN409_14015 PF00005 ABC transporter DN409_14015 PF00571 CBS domain DN409_14020 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DN409_14025 PF00574 Clp protease DN409_14045 PF13673 Acetyltransferase (GNAT) domain DN409_14050 PF18416 N-acetylglucosamine binding protein domain 2 DN409_14050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_14060 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DN409_14065 PF03781 Sulfatase-modifying factor enzyme 1 DN409_14075 PF10990 Protein of unknown function (DUF2809) DN409_14080 PF04237 YjbR DN409_14135 PF13538 UvrD-like helicase C-terminal domain DN409_14150 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like DN409_14155 PF00270 DEAD/DEAH box helicase DN409_14155 PF00271 Helicase conserved C-terminal domain DN409_14155 PF00570 HRDC domain DN409_14155 PF16124 RecQ zinc-binding DN409_14155 PF09382 RQC domain DN409_14195 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading DN409_14195 PF18416 N-acetylglucosamine binding protein domain 2 DN409_14200 PF05163 DinB family DN409_14215 PF03193 RsgA GTPase DN409_14220 PF02627 Carboxymuconolactone decarboxylase family DN409_14225 PF01235 Sodium:alanine symporter family DN409_14230 PF00171 Aldehyde dehydrogenase family DN409_14235 PF00701 Dihydrodipicolinate synthetase family DN409_14240 PF05544 Proline racemase DN409_14245 PF05544 Proline racemase DN409_14250 PF01266 FAD dependent oxidoreductase DN409_14255 PF13188 PAS domain DN409_14255 PF02954 Bacterial regulatory protein, Fis family DN409_14255 PF00158 Sigma-54 interaction domain DN409_14260 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_14260 PF04324 BFD-like [2Fe-2S] binding domain DN409_14270 PF04324 BFD-like [2Fe-2S] binding domain DN409_14270 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_14285 PF08876 Domain of unknown function (DUF1836) DN409_14290 PF09335 SNARE associated Golgi protein DN409_14305 PF04914 DltD protein DN409_14310 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_14315 PF00877 NlpC/P60 family DN409_14315 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DN409_14320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_14320 PF13378 Enolase C-terminal domain-like DN409_14340 PF00248 Aldo/keto reductase family DN409_14345 PF01965 DJ-1/PfpI family DN409_14380 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DN409_14380 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DN409_14385 PF00672 HAMP domain DN409_14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_14385 PF00512 His Kinase A (phospho-acceptor) domain DN409_14385 PF13426 PAS domain DN409_14390 PF00486 Transcriptional regulatory protein, C terminal DN409_14390 PF00072 Response regulator receiver domain DN409_14405 PF13419 Haloacid dehalogenase-like hydrolase DN409_14410 PF01048 Phosphorylase superfamily DN409_14415 PF08439 Oligopeptidase F DN409_14415 PF01432 Peptidase family M3 DN409_14430 PF02645 Uncharacterised protein, DegV family COG1307 DN409_14460 PF00857 Isochorismatase family DN409_14475 PF07690 Major Facilitator Superfamily DN409_14485 PF04519 Polymer-forming cytoskeletal DN409_14490 PF13171 Protein of unknown function (DUF4004) DN409_14495 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_14495 PF12793 Sugar transport-related sRNA regulator N-term DN409_14500 PF07690 Major Facilitator Superfamily DN409_14515 PF00483 Nucleotidyl transferase DN409_14520 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_14520 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_14520 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_14525 PF01370 NAD dependent epimerase/dehydratase family DN409_14530 PF00534 Glycosyl transferases group 1 DN409_14530 PF13439 Glycosyltransferase Family 4 DN409_14535 PF00872 Transposase, Mutator family DN409_14560 PF00534 Glycosyl transferases group 1 DN409_14560 PF13439 Glycosyltransferase Family 4 DN409_14565 PF01636 Phosphotransferase enzyme family DN409_14580 PF04226 Transglycosylase associated protein DN409_14595 PF01209 ubiE/COQ5 methyltransferase family DN409_14630 PF00155 Aminotransferase class I and II DN409_14635 PF07977 FabA-like domain DN409_14640 PF03630 Fumble DN409_14660 PF00005 ABC transporter DN409_14710 PF01594 AI-2E family transporter DN409_14755 PF02522 Aminoglycoside 3-N-acetyltransferase DN409_14765 PF13536 Putative multidrug resistance efflux transporter DN409_14790 PF08713 DNA alkylation repair enzyme DN409_14800 PF01522 Polysaccharide deacetylase DN409_14815 PF07690 Major Facilitator Superfamily DN409_14820 PF00884 Sulfatase DN409_14830 PF12848 ABC transporter DN409_14830 PF00005 ABC transporter DN409_14835 PF03176 MMPL family DN409_14845 PF16295 Tetracyclin repressor-like, C-terminal domain DN409_14845 PF00440 Bacterial regulatory proteins, tetR family DN409_14850 PF00293 NUDIX domain DN409_14865 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_14870 PF02153 Prephenate dehydrogenase DN409_14870 PF01842 ACT domain DN409_14875 PF00155 Aminotransferase class I and II DN409_14880 PF01264 Chorismate synthase DN409_14885 PF00793 DAHP synthetase I family DN409_14885 PF01817 Chorismate mutase type II DN409_14910 PF01636 Phosphotransferase enzyme family DN409_14915 PF02403 Seryl-tRNA synthetase N-terminal domain DN409_14915 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_14930 PF06725 3D domain DN409_14930 PF01476 LysM domain DN409_14940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_14950 PF03358 NADPH-dependent FMN reductase DN409_14985 PF13407 Periplasmic binding protein domain DN409_14990 PF04198 Putative sugar-binding domain DN409_14995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_14995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_15005 PF01791 DeoC/LacD family aldolase DN409_15010 PF08241 Methyltransferase domain DN409_15025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_15030 PF03992 Antibiotic biosynthesis monooxygenase DN409_15055 PF17853 GGDEF-like domain DN409_15055 PF12833 Helix-turn-helix domain DN409_15065 PF10924 Protein of unknown function (DUF2711) DN409_15070 PF00293 NUDIX domain DN409_15080 PF17853 GGDEF-like domain DN409_15080 PF12833 Helix-turn-helix domain DN409_15100 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_15100 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_15115 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_15115 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_15120 PF00487 Fatty acid desaturase DN409_15130 PF11188 Protein of unknown function (DUF2975) DN409_15135 PF13443 Cro/C1-type HTH DNA-binding domain DN409_15180 PF13302 Acetyltransferase (GNAT) domain DN409_15185 PF12681 Glyoxalase-like domain DN409_15215 PF17863 AAA lid domain DN409_15215 PF07726 ATPase family associated with various cellular activities (AAA) DN409_15230 PF07690 Major Facilitator Superfamily DN409_15235 PF00202 Aminotransferase class-III DN409_15240 PF00199 Catalase DN409_15240 PF06628 Catalase-related immune-responsive DN409_15250 PF01979 Amidohydrolase family DN409_15250 PF13382 Adenine deaminase C-terminal domain DN409_15255 PF00144 Beta-lactamase DN409_15275 PF07726 ATPase family associated with various cellular activities (AAA) DN409_15275 PF17863 AAA lid domain DN409_15285 PF00881 Nitroreductase family DN409_15290 PF01047 MarR family DN409_15300 PF00009 Elongation factor Tu GTP binding domain DN409_15300 PF14492 Elongation Factor G, domain II DN409_15300 PF03764 Elongation factor G, domain IV DN409_15300 PF00679 Elongation factor G C-terminus DN409_15310 PF00293 NUDIX domain DN409_15325 PF00005 ABC transporter DN409_15330 PF00392 Bacterial regulatory proteins, gntR family DN409_15360 PF12833 Helix-turn-helix domain DN409_15365 PF00583 Acetyltransferase (GNAT) family DN409_15380 PF00892 EamA-like transporter family DN409_15385 PF00155 Aminotransferase class I and II DN409_15385 PF00392 Bacterial regulatory proteins, gntR family DN409_15390 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 DN409_15395 PF13031 Protein of unknown function (DUF3892) DN409_15410 PF13673 Acetyltransferase (GNAT) domain DN409_15410 PF04229 GrpB protein DN409_15435 PF01925 Sulfite exporter TauE/SafE DN409_15445 PF00324 Amino acid permease DN409_15455 PF08713 DNA alkylation repair enzyme DN409_15460 PF10898 Protein of unknown function (DUF2716) DN409_15480 PF04989 Cephalosporin hydroxylase DN409_15485 PF10502 Signal peptidase, peptidase S26 DN409_15495 PF02146 Sir2 family DN409_15525 PF02626 Carboxyltransferase domain, subdomain A and B DN409_15530 PF02682 Carboxyltransferase domain, subdomain C and D DN409_15535 PF09339 IclR helix-turn-helix domain DN409_15535 PF01614 Bacterial transcriptional regulator DN409_15540 PF10502 Signal peptidase, peptidase S26 DN409_15545 PF03932 CutC family DN409_15555 PF08028 Acyl-CoA dehydrogenase, C-terminal domain DN409_15555 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_15555 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_15580 PF01022 Bacterial regulatory protein, arsR family DN409_15610 PF10903 Protein of unknown function (DUF2691) DN409_15615 PF02915 Rubrerythrin DN409_15625 PF00440 Bacterial regulatory proteins, tetR family DN409_15630 PF00391 PEP-utilising enzyme, mobile domain DN409_15630 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN409_15640 PF11798 IMS family HHH motif DN409_15640 PF11799 impB/mucB/samB family C-terminal domain DN409_15640 PF00817 impB/mucB/samB family DN409_15650 PF11954 Domain of unknown function (DUF3471) DN409_15650 PF00144 Beta-lactamase DN409_15680 PF12146 Serine aminopeptidase, S33 DN409_15680 PF13026 Protein of unknown function (DUF3887) DN409_15695 PF01522 Polysaccharide deacetylase DN409_15700 PF08239 Bacterial SH3 domain DN409_15700 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_15705 PF16736 Single Cache-like DN409_15705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_15705 PF00512 His Kinase A (phospho-acceptor) domain DN409_15705 PF00989 PAS fold DN409_15710 PF00072 Response regulator receiver domain DN409_15710 PF00486 Transcriptional regulatory protein, C terminal DN409_15720 PF01040 UbiA prenyltransferase family DN409_15730 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_15735 PF02952 L-fucose isomerase, C-terminal domain DN409_15735 PF07881 L-fucose isomerase, first N-terminal domain DN409_15735 PF07882 L-fucose isomerase, second N-terminal domain DN409_15740 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_15740 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_15745 PF00596 Class II Aldolase and Adducin N-terminal domain DN409_15755 PF02653 Branched-chain amino acid transport system / permease component DN409_15760 PF00005 ABC transporter DN409_15765 PF05025 RbsD / FucU transport protein family DN409_15770 PF00356 Bacterial regulatory proteins, lacI family DN409_15780 PF12746 GNAT acetyltransferase DN409_15795 PF01381 Helix-turn-helix DN409_15805 PF00550 Phosphopantetheine attachment site DN409_15805 PF07993 Male sterility protein DN409_15810 PF18665 Tetracyclin repressor-like, C-terminal domain DN409_15810 PF00440 Bacterial regulatory proteins, tetR family DN409_15820 PF01037 Lrp/AsnC ligand binding domain DN409_15835 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_15845 PF07282 Putative transposase DNA-binding domain DN409_15845 PF01385 Probable transposase DN409_15845 PF12323 Helix-turn-helix domain DN409_15865 PF08241 Methyltransferase domain DN409_15870 PF00175 Oxidoreductase NAD-binding domain DN409_15870 PF00258 Flavodoxin DN409_15870 PF00667 FAD binding domain DN409_15870 PF00067 Cytochrome P450 DN409_15875 PF07690 Major Facilitator Superfamily DN409_15905 PF00486 Transcriptional regulatory protein, C terminal DN409_15905 PF00072 Response regulator receiver domain DN409_15910 PF00512 His Kinase A (phospho-acceptor) domain DN409_15910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_15910 PF00672 HAMP domain DN409_15940 PF00291 Pyridoxal-phosphate dependent enzyme DN409_15955 PF02073 Thermophilic metalloprotease (M29) DN409_15965 PF01139 tRNA-splicing ligase RtcB DN409_15975 PF13411 MerR HTH family regulatory protein DN409_15980 PF04072 Leucine carboxyl methyltransferase DN409_16000 PF00005 ABC transporter DN409_16005 PF02687 FtsX-like permease family DN409_16025 PF00672 HAMP domain DN409_16025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_16025 PF00512 His Kinase A (phospho-acceptor) domain DN409_16030 PF00486 Transcriptional regulatory protein, C terminal DN409_16030 PF00072 Response regulator receiver domain DN409_16035 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_16035 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_16050 PF02016 LD-carboxypeptidase N-terminal domain DN409_16050 PF17676 LD-carboxypeptidase C-terminal domain DN409_16070 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_16070 PF01842 ACT domain DN409_16070 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_16075 PF00266 Aminotransferase class-V DN409_16100 PF04740 LXG domain of WXG superfamily DN409_16105 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_16125 PF00072 Response regulator receiver domain DN409_16125 PF00196 Bacterial regulatory proteins, luxR family DN409_16130 PF01804 Penicillin amidase DN409_16145 PF08361 MAATS-type transcriptional repressor, C-terminal region DN409_16145 PF00440 Bacterial regulatory proteins, tetR family DN409_16150 PF07690 Major Facilitator Superfamily DN409_16180 PF14044 NETI protein DN409_16185 PF07690 Major Facilitator Superfamily DN409_16195 PF12697 Alpha/beta hydrolase family DN409_16200 PF01047 MarR family DN409_16205 PF07690 Major Facilitator Superfamily DN409_16220 PF13610 DDE domain DN409_16235 PF13411 MerR HTH family regulatory protein DN409_16240 PF00144 Beta-lactamase DN409_16245 PF00144 Beta-lactamase DN409_16270 PF01381 Helix-turn-helix DN409_16280 PF00158 Sigma-54 interaction domain DN409_16280 PF13426 PAS domain DN409_16280 PF02954 Bacterial regulatory protein, Fis family DN409_16285 PF03606 C4-dicarboxylate anaerobic carrier DN409_16290 PF01979 Amidohydrolase family DN409_16335 PF04962 KduI/IolB family DN409_16340 PF01116 Fructose-bisphosphate aldolase class-II DN409_16345 PF01261 Xylose isomerase-like TIM barrel DN409_16350 PF00205 Thiamine pyrophosphate enzyme, central domain DN409_16350 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_16350 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN409_16355 PF00171 Aldehyde dehydrogenase family DN409_16360 PF00294 pfkB family carbohydrate kinase DN409_16365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_16365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN409_16375 PF07690 Major Facilitator Superfamily DN409_16380 PF00356 Bacterial regulatory proteins, lacI family DN409_16385 PF01385 Probable transposase DN409_16385 PF12323 Helix-turn-helix domain DN409_16385 PF07282 Putative transposase DNA-binding domain DN409_16450 PF00350 Dynamin family DN409_16465 PF02976 DNA mismatch repair enzyme MutH DN409_16480 PF00145 C-5 cytosine-specific DNA methylase DN409_16490 PF02976 DNA mismatch repair enzyme MutH DN409_16575 PF11798 IMS family HHH motif DN409_16575 PF11799 impB/mucB/samB family C-terminal domain DN409_16575 PF00817 impB/mucB/samB family DN409_16635 PF18801 response regulator aspartate phosphatase H, N terminal DN409_16660 PF10676 Spore germination protein gerPA/gerPF DN409_16695 PF00753 Metallo-beta-lactamase superfamily DN409_16695 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN409_16705 PF00144 Beta-lactamase DN409_16710 PF12389 Camelysin metallo-endopeptidase DN409_16720 PF00144 Beta-lactamase DN409_16755 PF01546 Peptidase family M20/M25/M40 DN409_16775 PF05175 Methyltransferase small domain DN409_16775 PF17827 PrmC N-terminal domain DN409_16780 PF02667 Short chain fatty acid transporter DN409_16790 PF02525 Flavodoxin-like fold DN409_16810 PF14256 YwiC-like protein DN409_16830 PF00005 ABC transporter DN409_16850 PF03737 Aldolase/RraA DN409_16855 PF03606 C4-dicarboxylate anaerobic carrier DN409_16860 PF04231 Endonuclease I DN409_16865 PF01048 Phosphorylase superfamily DN409_16885 PF04073 Aminoacyl-tRNA editing domain DN409_16890 PF03129 Anticodon binding domain DN409_16890 PF13393 Histidyl-tRNA synthetase DN409_16900 PF00391 PEP-utilising enzyme, mobile domain DN409_16900 PF02887 Pyruvate kinase, alpha/beta domain DN409_16900 PF00224 Pyruvate kinase, barrel domain DN409_16905 PF00245 Alkaline phosphatase DN409_16910 PF00881 Nitroreductase family DN409_16915 PF01638 HxlR-like helix-turn-helix DN409_16940 PF00005 ABC transporter DN409_16970 PF04542 Sigma-70 region 2 DN409_16970 PF08281 Sigma-70, region 4 DN409_16985 PF13419 Haloacid dehalogenase-like hydrolase DN409_17005 PF13344 Haloacid dehalogenase-like hydrolase DN409_17005 PF00293 NUDIX domain DN409_17010 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_17015 PF00480 ROK family DN409_17020 PF07690 Major Facilitator Superfamily DN409_17025 PF12464 Maltose acetyltransferase DN409_17025 PF14602 Hexapeptide repeat of succinyl-transferase DN409_17030 PF00579 tRNA synthetases class I (W and Y) DN409_17035 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN409_17035 PF13288 DXP reductoisomerase C-terminal domain DN409_17035 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN409_17040 PF01594 AI-2E family transporter DN409_17045 PF04226 Transglycosylase associated protein DN409_17090 PF01595 Cyclin M transmembrane N-terminal domain DN409_17090 PF00571 CBS domain DN409_17090 PF03471 Transporter associated domain DN409_17095 PF13411 MerR HTH family regulatory protein DN409_17100 PF00892 EamA-like transporter family DN409_17110 PF00805 Pentapeptide repeats (8 copies) DN409_17115 PF06906 Protein of unknown function (DUF1272) DN409_17120 PF10282 Lactonase, 7-bladed beta-propeller DN409_17125 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN409_17125 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN409_17130 PF00923 Transaldolase/Fructose-6-phosphate aldolase DN409_17135 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_17135 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN409_17140 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain DN409_17140 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain DN409_17175 PF02567 Phenazine biosynthesis-like protein DN409_17195 PF00501 AMP-binding enzyme DN409_17195 PF13193 AMP-binding enzyme C-terminal domain DN409_17200 PF02525 Flavodoxin-like fold DN409_17205 PF01638 HxlR-like helix-turn-helix DN409_17210 PF01022 Bacterial regulatory protein, arsR family DN409_17215 PF12791 Anti-sigma factor N-terminus DN409_17220 PF04542 Sigma-70 region 2 DN409_17245 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_17260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_17260 PF00512 His Kinase A (phospho-acceptor) domain DN409_17315 PF00512 His Kinase A (phospho-acceptor) domain DN409_17315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_17315 PF13426 PAS domain DN409_17315 PF00672 HAMP domain DN409_17320 PF00072 Response regulator receiver domain DN409_17320 PF00486 Transcriptional regulatory protein, C terminal DN409_17330 PF03466 LysR substrate binding domain DN409_17330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_17345 PF07690 Major Facilitator Superfamily DN409_17350 PF01609 Transposase DDE domain DN409_17355 PF07859 alpha/beta hydrolase fold DN409_17365 PF07690 Major Facilitator Superfamily DN409_17370 PF00440 Bacterial regulatory proteins, tetR family DN409_17390 PF00463 Isocitrate lyase family DN409_17425 PF01061 ABC-2 type transporter DN409_17430 PF00005 ABC transporter DN409_17430 PF13732 Domain of unknown function (DUF4162) DN409_17445 PF03063 Prismane/CO dehydrogenase family DN409_17450 PF00753 Metallo-beta-lactamase superfamily DN409_17475 PF00144 Beta-lactamase DN409_17515 PF00753 Metallo-beta-lactamase superfamily DN409_17530 PF03551 Transcriptional regulator PadR-like family DN409_17535 PF00107 Zinc-binding dehydrogenase DN409_17535 PF08240 Alcohol dehydrogenase GroES-like domain DN409_17540 PF00324 Amino acid permease DN409_17550 PF07690 Major Facilitator Superfamily DN409_17555 PF07969 Amidohydrolase family DN409_17565 PF00202 Aminotransferase class-III DN409_17580 PF01554 MatE DN409_17600 PF02585 GlcNAc-PI de-N-acetylase DN409_17605 PF08830 Protein of unknown function (DUF1806) DN409_17610 PF03600 Citrate transporter DN409_17630 PF01497 Periplasmic binding protein DN409_17635 PF01032 FecCD transport family DN409_17640 PF01032 FecCD transport family DN409_17645 PF05675 Protein of unknown function (DUF817) DN409_17670 PF03466 LysR substrate binding domain DN409_17670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_17675 PF08240 Alcohol dehydrogenase GroES-like domain DN409_17675 PF00107 Zinc-binding dehydrogenase DN409_17690 PF01713 Smr domain DN409_17690 PF00488 MutS domain V DN409_17705 PF00128 Alpha amylase, catalytic domain DN409_17705 PF09154 Domain of unknown function (DUF1939) DN409_17710 PF00797 N-acetyltransferase DN409_17715 PF01432 Peptidase family M3 DN409_17715 PF08439 Oligopeptidase F DN409_17720 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN409_17725 PF07969 Amidohydrolase family DN409_17740 PF01062 Bestrophin, RFP-TM, chloride channel DN409_17745 PF06146 Phosphate-starvation-inducible E DN409_17750 PF04371 Porphyromonas-type peptidyl-arginine deiminase DN409_17755 PF00144 Beta-lactamase DN409_17770 PF03466 LysR substrate binding domain DN409_17770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_17790 PF13538 UvrD-like helicase C-terminal domain DN409_17800 PF01494 FAD binding domain DN409_17805 PF01022 Bacterial regulatory protein, arsR family DN409_17810 PF00107 Zinc-binding dehydrogenase DN409_17810 PF08240 Alcohol dehydrogenase GroES-like domain DN409_17825 PF18801 response regulator aspartate phosphatase H, N terminal DN409_17830 PF04299 Putative FMN-binding domain DN409_17845 PF01565 FAD binding domain DN409_17845 PF02913 FAD linked oxidases, C-terminal domain DN409_17860 PF01752 Collagenase DN409_17860 PF08453 Peptidase family M9 N-terminal DN409_17860 PF18496 Collagenase G catalytic helper subdomain DN409_17865 PF02308 MgtC family DN409_17875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_17880 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_17885 PF00005 ABC transporter DN409_17890 PF00528 Binding-protein-dependent transport system inner membrane component DN409_17895 PF04294 VanW like protein DN409_17905 PF13039 Protein of unknown function (DUF3900) DN409_17905 PF13037 Domain of unknown function (DUF3898) DN409_17920 PF00313 'Cold-shock' DNA-binding domain DN409_17930 PF00258 Flavodoxin DN409_17950 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_17960 PF00106 short chain dehydrogenase DN409_17970 PF14698 Argininosuccinate lyase C-terminal DN409_17970 PF00206 Lyase DN409_17980 PF01156 Inosine-uridine preferring nucleoside hydrolase DN409_17985 PF00474 Sodium:solute symporter family DN409_17995 PF00171 Aldehyde dehydrogenase family DN409_18010 PF13249 Squalene-hopene cyclase N-terminal domain DN409_18010 PF13243 Squalene-hopene cyclase C-terminal domain DN409_18015 PF02681 Divergent PAP2 family DN409_18020 PF00892 EamA-like transporter family DN409_18025 PF06961 Protein of unknown function (DUF1294) DN409_18030 PF13520 Amino acid permease DN409_18060 PF08241 Methyltransferase domain DN409_18065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_18070 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_18075 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN409_18080 PF03816 Cell envelope-related transcriptional attenuator domain DN409_18090 PF08281 Sigma-70, region 4 DN409_18090 PF04542 Sigma-70 region 2 DN409_18100 PF00005 ABC transporter DN409_18100 PF13732 Domain of unknown function (DUF4162) DN409_18120 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DN409_18120 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_18125 PF00521 DNA gyrase/topoisomerase IV, subunit A DN409_18125 PF03989 DNA gyrase C-terminal domain, beta-propeller DN409_18130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_18130 PF01751 Toprim domain DN409_18130 PF00986 DNA gyrase B subunit, carboxyl terminus DN409_18130 PF00204 DNA gyrase B DN409_18135 PF13380 CoA binding domain DN409_18140 PF13180 PDZ domain DN409_18145 PF00072 Response regulator receiver domain DN409_18145 PF00486 Transcriptional regulatory protein, C terminal DN409_18155 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN409_18155 PF03477 ATP cone domain DN409_18160 PF02660 Glycerol-3-phosphate acyltransferase DN409_18165 PF01521 Iron-sulphur cluster biosynthesis DN409_18170 PF03061 Thioesterase superfamily DN409_18175 PF01476 LysM domain DN409_18175 PF00704 Glycosyl hydrolases family 18 DN409_18180 PF08177 Small acid-soluble spore protein N family DN409_18185 PF13040 Fur-regulated basic protein B DN409_18190 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_18190 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_18190 PF11490 DNA polymerase III polC-type N-terminus II DN409_18190 PF01336 OB-fold nucleic acid binding domain DN409_18190 PF00929 Exonuclease DN409_18190 PF02811 PHP domain DN409_18190 PF14579 Helix-hairpin-helix motif DN409_18195 PF00578 AhpC/TSA family DN409_18230 PF00664 ABC transporter transmembrane region DN409_18230 PF00005 ABC transporter DN409_18235 PF02517 CPBP intramembrane metalloprotease DN409_18240 PF00330 Aconitase family (aconitate hydratase) DN409_18240 PF00694 Aconitase C-terminal domain DN409_18250 PF01522 Polysaccharide deacetylase DN409_18260 PF08179 Small acid-soluble spore protein P family DN409_18270 PF07690 Major Facilitator Superfamily DN409_18280 PF01411 tRNA synthetases class II (A) DN409_18280 PF02272 DHHA1 domain DN409_18280 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_18295 PF02803 Thiolase, C-terminal domain DN409_18295 PF00108 Thiolase, N-terminal domain DN409_18300 PF00501 AMP-binding enzyme DN409_18300 PF13193 AMP-binding enzyme C-terminal domain DN409_18305 PF02632 BioY family DN409_18310 PF00501 AMP-binding enzyme DN409_18310 PF13193 AMP-binding enzyme C-terminal domain DN409_18335 PF05532 CsbD-like DN409_18360 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_18360 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_18375 PF13188 PAS domain DN409_18375 PF13426 PAS domain DN409_18375 PF00989 PAS fold DN409_18375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_18375 PF00512 His Kinase A (phospho-acceptor) domain DN409_18385 PF01738 Dienelactone hydrolase family DN409_18390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_18395 PF01645 Conserved region in glutamate synthase DN409_18400 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DN409_18405 PF00107 Zinc-binding dehydrogenase DN409_18405 PF08240 Alcohol dehydrogenase GroES-like domain DN409_18410 PF02559 CarD-like/TRCF domain DN409_18415 PF00491 Arginase family DN409_18420 PF01979 Amidohydrolase family DN409_18440 PF01209 ubiE/COQ5 methyltransferase family DN409_18465 PF11084 Protein of unknown function (DUF2621) DN409_18470 PF07301 Protein of unknown function (DUF1453) DN409_18475 PF02683 Cytochrome C biogenesis protein transmembrane region DN409_18495 PF12679 ABC-2 family transporter protein DN409_18500 PF00005 ABC transporter DN409_18510 PF03466 LysR substrate binding domain DN409_18510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_18515 PF03788 LrgA family DN409_18520 PF04172 LrgB-like family DN409_18525 PF00293 NUDIX domain DN409_18525 PF13344 Haloacid dehalogenase-like hydrolase DN409_18535 PF01925 Sulfite exporter TauE/SafE DN409_18545 PF01510 N-acetylmuramoyl-L-alanine amidase DN409_18545 PF01471 Putative peptidoglycan binding domain DN409_18560 PF08239 Bacterial SH3 domain DN409_18560 PF01183 Glycosyl hydrolases family 25 DN409_18565 PF00664 ABC transporter transmembrane region DN409_18565 PF00005 ABC transporter DN409_18570 PF00005 ABC transporter DN409_18570 PF00664 ABC transporter transmembrane region DN409_18580 PF10747 Sporulation inhibitor of replication protein SirA DN409_18585 PF02779 Transketolase, pyrimidine binding domain DN409_18585 PF02780 Transketolase, C-terminal domain DN409_18585 PF00456 Transketolase, thiamine diphosphate binding domain DN409_18590 PF00528 Binding-protein-dependent transport system inner membrane component DN409_18595 PF00528 Binding-protein-dependent transport system inner membrane component DN409_18600 PF00005 ABC transporter DN409_18605 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_18610 PF02872 5'-nucleotidase, C-terminal domain DN409_18610 PF00149 Calcineurin-like phosphoesterase DN409_18615 PF05979 Bacterial protein of unknown function (DUF896) DN409_18620 PF00239 Resolvase, N terminal domain DN409_18640 PF03551 Transcriptional regulator PadR-like family DN409_18645 PF00005 ABC transporter DN409_18645 PF00664 ABC transporter transmembrane region DN409_18680 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_18690 PF02397 Bacterial sugar transferase DN409_18700 PF13229 Right handed beta helix region DN409_18710 PF01501 Glycosyl transferase family 8 DN409_18710 PF08759 Glycosyltransferase GT-D fold DN409_18715 PF00535 Glycosyl transferase family 2 DN409_18715 PF01501 Glycosyl transferase family 8 DN409_18720 PF00534 Glycosyl transferases group 1 DN409_18730 PF00534 Glycosyl transferases group 1 DN409_18730 PF08323 Starch synthase catalytic domain DN409_18740 PF00534 Glycosyl transferases group 1 DN409_18740 PF13439 Glycosyltransferase Family 4 DN409_18750 PF00535 Glycosyl transferase family 2 DN409_18755 PF00534 Glycosyl transferases group 1 DN409_18755 PF13439 Glycosyltransferase Family 4 DN409_18760 PF13439 Glycosyltransferase Family 4 DN409_18760 PF00534 Glycosyl transferases group 1 DN409_18765 PF02719 Polysaccharide biosynthesis protein DN409_18770 PF13614 AAA domain DN409_18775 PF02706 Chain length determinant protein DN409_18775 PF13807 G-rich domain on putative tyrosine kinase DN409_18780 PF03951 Glutamine synthetase, beta-Grasp domain DN409_18780 PF00120 Glutamine synthetase, catalytic domain DN409_18785 PF13411 MerR HTH family regulatory protein DN409_18790 PF06838 Methionine gamma-lyase DN409_18795 PF16360 GTP-binding GTPase Middle Region DN409_18795 PF01926 50S ribosome-binding GTPase DN409_18795 PF13167 GTP-binding GTPase N-terminal DN409_18800 PF03458 UPF0126 domain DN409_18805 PF17866 AAA lid domain DN409_18805 PF00004 ATPase family associated with various cellular activities (AAA) DN409_18820 PF17209 Hfq protein DN409_18835 PF01476 LysM domain DN409_18835 PF06725 3D domain DN409_18840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_18840 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DN409_18845 PF00294 pfkB family carbohydrate kinase DN409_18850 PF08220 DeoR-like helix-turn-helix domain DN409_18850 PF00455 DeoR C terminal sensor domain DN409_18855 PF00465 Iron-containing alcohol dehydrogenase DN409_18860 PF04238 Protein of unknown function (DUF420) DN409_18870 PF00324 Amino acid permease DN409_18880 PF00041 Fibronectin type III domain DN409_18880 PF00704 Glycosyl hydrolases family 18 DN409_18885 PF01546 Peptidase family M20/M25/M40 DN409_18885 PF07687 Peptidase dimerisation domain DN409_18890 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN409_18890 PF00149 Calcineurin-like phosphoesterase DN409_18895 PF01226 Formate/nitrite transporter DN409_18900 PF00216 Bacterial DNA-binding protein DN409_18910 PF00403 Heavy-metal-associated domain DN409_18915 PF00403 Heavy-metal-associated domain DN409_18920 PF02583 Metal-sensitive transcriptional repressor DN409_18940 PF00756 Putative esterase DN409_18945 PF00005 ABC transporter DN409_18950 PF01032 FecCD transport family DN409_18955 PF01032 FecCD transport family DN409_18960 PF01497 Periplasmic binding protein DN409_18965 PF03372 Endonuclease/Exonuclease/phosphatase family DN409_18970 PF02805 Metal binding domain of Ada DN409_18970 PF12833 Helix-turn-helix domain DN409_18975 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN409_18975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN409_18980 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain DN409_18980 PF00730 HhH-GPD superfamily base excision DNA repair protein DN409_18985 PF10282 Lactonase, 7-bladed beta-propeller DN409_19005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_19010 PF00563 EAL domain DN409_19010 PF00990 Diguanylate cyclase, GGDEF domain DN409_19010 PF03707 Bacterial signalling protein N terminal repeat DN409_19015 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_19015 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_19025 PF16363 GDP-mannose 4,6 dehydratase DN409_19030 PF08485 Polysaccharide biosynthesis protein C-terminal DN409_19030 PF02719 Polysaccharide biosynthesis protein DN409_19045 PF10787 Uncharacterised protein from bacillus cereus group DN409_19050 PF04172 LrgB-like family DN409_19055 PF03788 LrgA family DN409_19060 PF00392 Bacterial regulatory proteins, gntR family DN409_19060 PF00155 Aminotransferase class I and II DN409_19065 PF00364 Biotin-requiring enzyme DN409_19065 PF00561 alpha/beta hydrolase fold DN409_19070 PF02585 GlcNAc-PI de-N-acetylase DN409_19080 PF00392 Bacterial regulatory proteins, gntR family DN409_19080 PF07702 UTRA domain DN409_19085 PF00232 Glycosyl hydrolase family 1 DN409_19090 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_19095 PF07486 Cell Wall Hydrolase DN409_19105 PF00350 Dynamin family DN409_19115 PF00232 Glycosyl hydrolase family 1 DN409_19120 PF00367 phosphotransferase system, EIIB DN409_19120 PF02378 Phosphotransferase system, EIIC DN409_19120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_19125 PF00874 PRD domain DN409_19125 PF03123 CAT RNA binding domain DN409_19140 PF00892 EamA-like transporter family DN409_19145 PF00155 Aminotransferase class I and II DN409_19145 PF00392 Bacterial regulatory proteins, gntR family DN409_19160 PF10628 Outer spore coat protein E (CotE) DN409_19165 PF06133 Control of competence regulator ComK, YlbF/YmcA DN409_19175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN409_19180 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN409_19180 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN409_19180 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN409_19185 PF01244 Membrane dipeptidase (Peptidase family M19) DN409_19190 PF04232 Stage V sporulation protein S (SpoVS) DN409_19195 PF13277 YmdB-like protein DN409_19215 PF01066 CDP-alcohol phosphatidyltransferase DN409_19220 PF13464 Domain of unknown function (DUF4115) DN409_19225 PF11868 Protein of unknown function (DUF3388) DN409_19230 PF11588 Protein of unknown function (DUF3243) DN409_19240 PF00675 Insulinase (Peptidase family M16) DN409_19240 PF05193 Peptidase M16 inactive domain DN409_19245 PF05193 Peptidase M16 inactive domain DN409_19270 PF07702 UTRA domain DN409_19270 PF00392 Bacterial regulatory proteins, gntR family DN409_19280 PF01580 FtsK/SpoIIIE family DN409_19280 PF09397 Ftsk gamma domain DN409_19280 PF17854 FtsK alpha domain DN409_19285 PF14035 YlzJ-like protein DN409_19290 PF00574 Clp protease DN409_19295 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN409_19295 PF00753 Metallo-beta-lactamase superfamily DN409_19295 PF17770 Ribonuclease J C-terminal domain DN409_19300 PF00701 Dihydrodipicolinate synthetase family DN409_19305 PF00696 Amino acid kinase family DN409_19305 PF13840 ACT domain DN409_19310 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN409_19310 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN409_19315 PF02441 Flavoprotein DN409_19320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_19320 PF16924 Dipicolinate synthase subunit A N-terminal domain DN409_19325 PF05239 PRC-barrel domain DN409_19330 PF05193 Peptidase M16 inactive domain DN409_19330 PF00675 Insulinase (Peptidase family M16) DN409_19335 PF01522 Polysaccharide deacetylase DN409_19345 PF00312 Ribosomal protein S15 DN409_19350 PF06574 FAD synthetase DN409_19350 PF01687 Riboflavin kinase DN409_19355 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN409_19355 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN409_19360 PF02033 Ribosome-binding factor A DN409_19365 PF04456 Protein of unknown function (DUF503) DN409_19375 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN409_19380 PF04296 Protein of unknown function (DUF448) DN409_19385 PF13184 NusA-like KH domain DN409_19385 PF00575 S1 RNA binding domain DN409_19385 PF08529 NusA N-terminal domain DN409_19395 PF14480 DNA polymerase III polC-type N-terminus I DN409_19395 PF11490 DNA polymerase III polC-type N-terminus II DN409_19395 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_19395 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_19395 PF14579 Helix-hairpin-helix motif DN409_19395 PF02811 PHP domain DN409_19395 PF00929 Exonuclease DN409_19405 PF17820 PDZ domain DN409_19405 PF02163 Peptidase family M50 DN409_19410 PF13288 DXP reductoisomerase C-terminal domain DN409_19410 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN409_19410 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN409_19420 PF01255 Putative undecaprenyl diphosphate synthase DN409_19430 PF00696 Amino acid kinase family DN409_19460 PF02899 Phage integrase, N-terminal SAM-like domain DN409_19460 PF00589 Phage integrase family DN409_19470 PF01751 Toprim domain DN409_19470 PF01131 DNA topoisomerase DN409_19470 PF01396 Topoisomerase DNA binding C4 zinc finger DN409_19475 PF02481 DNA recombination-mediator protein A DN409_19480 PF02629 CoA binding domain DN409_19480 PF00549 CoA-ligase DN409_19495 PF01926 50S ribosome-binding GTPase DN409_19500 PF10502 Signal peptidase, peptidase S26 DN409_19525 PF00886 Ribosomal protein S16 DN409_19530 PF02978 Signal peptide binding domain DN409_19530 PF02881 SRP54-type protein, helical bundle domain DN409_19530 PF00448 SRP54-type protein, GTPase domain DN409_19540 PF00448 SRP54-type protein, GTPase domain DN409_19540 PF02881 SRP54-type protein, helical bundle domain DN409_19545 PF06470 SMC proteins Flexible Hinge Domain DN409_19545 PF02463 RecF/RecN/SMC N terminal domain DN409_19565 PF00698 Acyl transferase domain DN409_19580 PF00271 Helicase conserved C-terminal domain DN409_19580 PF17191 RecG wedge domain DN409_19580 PF00270 DEAD/DEAH box helicase DN409_19585 PF13684 Dihydroxyacetone kinase family DN409_19585 PF02734 DAK2 domain DN409_19590 PF03780 Asp23 family, cell envelope-related function DN409_19595 PF00830 Ribosomal L28 family DN409_19600 PF08183 Stage V sporulation protein family DN409_19605 PF04263 Thiamin pyrophosphokinase, catalytic domain DN409_19605 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DN409_19610 PF00834 Ribulose-phosphate 3 epimerase family DN409_19615 PF16745 RsgA N-terminal domain DN409_19615 PF03193 RsgA GTPase DN409_19620 PF03793 PASTA domain DN409_19620 PF00069 Protein kinase domain DN409_19635 PF01029 NusB family DN409_19635 PF01189 16S rRNA methyltransferase RsmB/F DN409_19645 PF01327 Polypeptide deformylase DN409_19650 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN409_19650 PF04851 Type III restriction enzyme, res subunit DN409_19650 PF18074 Primosomal protein N C-terminal domain DN409_19650 PF00271 Helicase conserved C-terminal domain DN409_19650 PF17764 3′ DNA-binding domain (3′BD) DN409_19655 PF04127 DNA / pantothenate metabolism flavoprotein DN409_19655 PF02441 Flavoprotein DN409_19665 PF00625 Guanylate kinase DN409_19670 PF04025 Domain of unknown function (DUF370) DN409_19675 PF08340 Domain of unknown function (DUF1732) DN409_19675 PF03755 YicC-like family, N-terminal region DN409_19680 PF00689 Cation transporting ATPase, C-terminus DN409_19680 PF00690 Cation transporter/ATPase, N-terminus DN409_19695 PF00557 Metallopeptidase family M24 DN409_19695 PF01321 Creatinase/Prolidase N-terminal domain DN409_19725 PF00156 Phosphoribosyl transferase domain DN409_19730 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN409_19750 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN409_19750 PF00117 Glutamine amidotransferase class-I DN409_19765 PF00860 Permease family DN409_19775 PF00849 RNA pseudouridylate synthase DN409_19775 PF01479 S4 domain DN409_19795 PF05103 DivIVA protein DN409_19800 PF01479 S4 domain DN409_19800 PF17774 Putative RNA-binding domain in YlmH DN409_19805 PF02325 YGGT family DN409_19815 PF01168 Alanine racemase, N-terminal domain DN409_19825 PF05239 PRC-barrel domain DN409_19830 PF04539 Sigma-70 region 3 DN409_19830 PF04542 Sigma-70 region 2 DN409_19830 PF04545 Sigma-70, region 4 DN409_19835 PF04545 Sigma-70, region 4 DN409_19835 PF04542 Sigma-70 region 2 DN409_19840 PF03419 Sporulation factor SpoIIGA DN409_19845 PF12327 FtsZ family, C-terminal domain DN409_19845 PF00091 Tubulin/FtsZ family, GTPase domain DN409_19850 PF02491 SHS2 domain inserted in FTSA DN409_19855 PF08478 POTRA domain, FtsQ-type DN409_19855 PF03799 Cell division protein FtsQ DN409_19860 PF01565 FAD binding domain DN409_19860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN409_19865 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_19865 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_19870 PF01098 Cell cycle protein DN409_19885 PF08245 Mur ligase middle domain DN409_19885 PF01225 Mur ligase family, catalytic domain DN409_19885 PF02875 Mur ligase family, glutamate ligase domain DN409_19890 PF03793 PASTA domain DN409_19890 PF00905 Penicillin binding protein transpeptidase domain DN409_19890 PF03717 Penicillin-binding Protein dimerisation domain DN409_19900 PF04977 Septum formation initiator DN409_19915 PF02558 Ketopantoate reductase PanE/ApbA DN409_19915 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN409_19930 PF01783 Ribosomal L32p protein family DN409_19935 PF02620 Large ribosomal RNA subunit accumulation protein YceD DN409_19945 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_19945 PF13180 PDZ domain DN409_19950 PF01734 Patatin-like phospholipase DN409_19955 PF07670 Nucleoside recognition DN409_19960 PF01467 Cytidylyltransferase-like DN409_19980 PF06133 Control of competence regulator ComK, YlbF/YmcA DN409_19985 PF00300 Histidine phosphatase superfamily (branch 1) DN409_19990 PF14003 YlbE-like protein DN409_19995 PF14071 Putative coat protein DN409_20000 PF14504 CAP-associated N-terminal DN409_20000 PF00188 Cysteine-rich secretory protein family DN409_20005 PF08868 YugN-like family DN409_20010 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) DN409_20015 PF03626 Prokaryotic Cytochrome C oxidase subunit IV DN409_20020 PF00510 Cytochrome c oxidase subunit III DN409_20025 PF00115 Cytochrome C and Quinol oxidase polypeptide I DN409_20030 PF00034 Cytochrome c DN409_20030 PF00116 Cytochrome C oxidase subunit II, periplasmic domain DN409_20030 PF02790 Cytochrome C oxidase subunit II, transmembrane domain DN409_20045 PF02436 Conserved carboxylase domain DN409_20045 PF00364 Biotin-requiring enzyme DN409_20045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_20045 PF00289 Biotin carboxylase, N-terminal domain DN409_20045 PF02785 Biotin carboxylase C-terminal domain DN409_20045 PF00682 HMGL-like DN409_20055 PF01098 Cell cycle protein DN409_20070 PF13638 PIN domain DN409_20070 PF02562 PhoH-like protein DN409_20080 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) DN409_20090 PF14036 YlaH-like protein DN409_20105 PF00459 Inositol monophosphatase family DN409_20125 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN409_20125 PF01276 Orn/Lys/Arg decarboxylase, major domain DN409_20170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_20170 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_20175 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_20175 PF00364 Biotin-requiring enzyme DN409_20175 PF02817 e3 binding domain DN409_20180 PF02780 Transketolase, C-terminal domain DN409_20180 PF02779 Transketolase, pyrimidine binding domain DN409_20185 PF00676 Dehydrogenase E1 component DN409_20195 PF01327 Polypeptide deformylase DN409_20215 PF17770 Ribonuclease J C-terminal domain DN409_20215 PF00753 Metallo-beta-lactamase superfamily DN409_20215 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN409_20220 PF02080 TrkA-C domain DN409_20220 PF02254 TrkA-N domain DN409_20240 PF03466 LysR substrate binding domain DN409_20240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_20255 PF04308 Ribonuclease H-like DN409_20265 PF08796 Protein of unknown function (DUF1797) DN409_20280 PF00563 EAL domain DN409_20280 PF10388 EAL-domain associated signalling protein domain DN409_20290 PF00149 Calcineurin-like phosphoesterase DN409_20290 PF10518 TAT (twin-arginine translocation) pathway signal sequence DN409_20300 PF13089 Polyphosphate kinase N-terminal domain DN409_20300 PF13090 Polyphosphate kinase C-terminal domain 2 DN409_20300 PF02503 Polyphosphate kinase middle domain DN409_20300 PF17941 Polyphosphate kinase C-terminal domain 1 DN409_20305 PF02541 Ppx/GppA phosphatase family DN409_20310 PF14177 YkyB-like protein DN409_20335 PF07690 Major Facilitator Superfamily DN409_20355 PF14040 Deoxyribonuclease NucA/NucB DN409_20365 PF00512 His Kinase A (phospho-acceptor) domain DN409_20365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_20375 PF00155 Aminotransferase class I and II DN409_20380 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_20380 PF00356 Bacterial regulatory proteins, lacI family DN409_20385 PF00528 Binding-protein-dependent transport system inner membrane component DN409_20390 PF00528 Binding-protein-dependent transport system inner membrane component DN409_20395 PF13416 Bacterial extracellular solute-binding protein DN409_20400 PF00128 Alpha amylase, catalytic domain DN409_20400 PF16657 Maltogenic Amylase, C-terminal domain DN409_20400 PF02903 Alpha amylase, N-terminal ig-like domain DN409_20405 PF16657 Maltogenic Amylase, C-terminal domain DN409_20405 PF00128 Alpha amylase, catalytic domain DN409_20410 PF17912 MalK OB fold domain DN409_20410 PF03459 TOBE domain DN409_20410 PF00005 ABC transporter DN409_20455 PF02803 Thiolase, C-terminal domain DN409_20455 PF00108 Thiolase, N-terminal domain DN409_20460 PF00293 NUDIX domain DN409_20490 PF03551 Transcriptional regulator PadR-like family DN409_20515 PF00795 Carbon-nitrogen hydrolase DN409_20520 PF00155 Aminotransferase class I and II DN409_20555 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN409_20555 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DN409_20560 PF00144 Beta-lactamase DN409_20565 PF00990 Diguanylate cyclase, GGDEF domain DN409_20570 PF00881 Nitroreductase family DN409_20585 PF02896 PEP-utilising enzyme, TIM barrel domain DN409_20585 PF05524 PEP-utilising enzyme, N-terminal DN409_20585 PF00391 PEP-utilising enzyme, mobile domain DN409_20590 PF00381 PTS HPr component phosphorylation site DN409_20595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_20595 PF00367 phosphotransferase system, EIIB DN409_20595 PF02378 Phosphotransferase system, EIIC DN409_20600 PF00874 PRD domain DN409_20600 PF03123 CAT RNA binding domain DN409_20620 PF01979 Amidohydrolase family DN409_20650 PF03745 Domain of unknown function (DUF309) DN409_20655 PF00583 Acetyltransferase (GNAT) family DN409_20660 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN409_20665 PF06207 Protein of unknown function (DUF1002) DN409_20675 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_20680 PF14097 Stage V sporulation protein AE1 DN409_20685 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_20690 PF07451 Stage V sporulation protein AD (SpoVAD) DN409_20695 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_20700 PF13782 Stage V sporulation protein AB DN409_20705 PF12164 Stage V sporulation protein AA DN409_20715 PF04545 Sigma-70, region 4 DN409_20715 PF04542 Sigma-70 region 2 DN409_20715 PF04539 Sigma-70 region 3 DN409_20720 PF13581 Histidine kinase-like ATPase domain DN409_20725 PF01740 STAS domain DN409_20730 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_20730 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_20735 PF00392 Bacterial regulatory proteins, gntR family DN409_20740 PF00005 ABC transporter DN409_20760 PF01047 MarR family DN409_20770 PF00860 Permease family DN409_20775 PF01544 CorA-like Mg2+ transporter protein DN409_20780 PF02885 Glycosyl transferase family, helical bundle domain DN409_20780 PF00591 Glycosyl transferase family, a/b domain DN409_20780 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DN409_20785 PF01048 Phosphorylase superfamily DN409_20795 PF13115 YtkA-like DN409_20800 PF02899 Phage integrase, N-terminal SAM-like domain DN409_20800 PF00589 Phage integrase family DN409_20805 PF14004 Protein of unknown function (DUF4227) DN409_20810 PF01475 Ferric uptake regulator family DN409_20815 PF01944 Stage II sporulation protein M DN409_20825 PF00293 NUDIX domain DN409_20830 PF13072 Mother cell inhibitor of FtsZ DN409_20835 PF00248 Aldo/keto reductase family DN409_20840 PF00248 Aldo/keto reductase family DN409_20845 PF13673 Acetyltransferase (GNAT) domain DN409_20845 PF04229 GrpB protein DN409_20855 PF00565 Staphylococcal nuclease homologue DN409_20855 PF00746 LPXTG cell wall anchor motif DN409_20855 PF00149 Calcineurin-like phosphoesterase DN409_20855 PF02872 5'-nucleotidase, C-terminal domain DN409_20865 PF12146 Serine aminopeptidase, S33 DN409_20870 PF03553 Na+/H+ antiporter family DN409_20870 PF13726 Na+-H+ antiporter family DN409_20875 PF00356 Bacterial regulatory proteins, lacI family DN409_20880 PF00583 Acetyltransferase (GNAT) family DN409_20885 PF12146 Serine aminopeptidase, S33 DN409_20890 PF10827 Protein of unknown function (DUF2552) DN409_20900 PF01872 RibD C-terminal domain DN409_20900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_20905 PF00677 Lumazine binding domain DN409_20920 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN409_20935 PF13847 Methyltransferase domain DN409_20940 PF08241 Methyltransferase domain DN409_20940 PF12697 Alpha/beta hydrolase family DN409_20955 PF00202 Aminotransferase class-III DN409_20970 PF02872 5'-nucleotidase, C-terminal domain DN409_20970 PF00149 Calcineurin-like phosphoesterase DN409_20980 PF13404 AsnC-type helix-turn-helix domain DN409_20980 PF01037 Lrp/AsnC ligand binding domain DN409_20995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN409_20995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN409_21000 PF00202 Aminotransferase class-III DN409_21010 PF01960 ArgJ family DN409_21025 PF00106 short chain dehydrogenase DN409_21030 PF00753 Metallo-beta-lactamase superfamily DN409_21035 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_21035 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_21040 PF03313 Serine dehydratase alpha chain DN409_21045 PF01842 ACT domain DN409_21045 PF03315 Serine dehydratase beta chain DN409_21090 PF00005 ABC transporter DN409_21105 PF00690 Cation transporter/ATPase, N-terminus DN409_21105 PF00689 Cation transporting ATPase, C-terminus DN409_21110 PF00817 impB/mucB/samB family DN409_21110 PF11798 IMS family HHH motif DN409_21110 PF11799 impB/mucB/samB family C-terminal domain DN409_21120 PF01546 Peptidase family M20/M25/M40 DN409_21120 PF07687 Peptidase dimerisation domain DN409_21125 PF13302 Acetyltransferase (GNAT) domain DN409_21135 PF03734 L,D-transpeptidase catalytic domain DN409_21140 PF06081 Aromatic acid exporter family member 1 DN409_21140 PF11728 Putative aromatic acid exporter C-terminal domain DN409_21145 PF00005 ABC transporter DN409_21150 PF00528 Binding-protein-dependent transport system inner membrane component DN409_21155 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN409_21160 PF06491 Disulphide isomerase DN409_21165 PF11208 Protein of unknown function (DUF2992) DN409_21175 PF04239 Protein of unknown function (DUF421) DN409_21180 PF01098 Cell cycle protein DN409_21185 PF02817 e3 binding domain DN409_21185 PF00364 Biotin-requiring enzyme DN409_21185 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DN409_21190 PF02779 Transketolase, pyrimidine binding domain DN409_21190 PF02780 Transketolase, C-terminal domain DN409_21195 PF00676 Dehydrogenase E1 component DN409_21200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DN409_21200 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_21210 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN409_21210 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN409_21215 PF01515 Phosphate acetyl/butaryl transferase DN409_21225 PF02954 Bacterial regulatory protein, Fis family DN409_21225 PF00158 Sigma-54 interaction domain DN409_21225 PF00989 PAS fold DN409_21230 PF11118 Protein of unknown function (DUF2627) DN409_21235 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_21240 PF14174 YycC-like protein DN409_21270 PF14436 Bacterial EndoU nuclease DN409_21270 PF04740 LXG domain of WXG superfamily DN409_21280 PF08769 Sporulation initiation factor Spo0A C terminal DN409_21280 PF00072 Response regulator receiver domain DN409_21290 PF05580 SpoIVB peptidase S55 DN409_21290 PF17820 PDZ domain DN409_21295 PF13476 AAA domain DN409_21305 PF01479 S4 domain DN409_21305 PF01728 FtsJ-like methyltransferase DN409_21315 PF00348 Polyprenyl synthetase DN409_21340 PF03780 Asp23 family, cell envelope-related function DN409_21345 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN409_21345 PF00289 Biotin carboxylase, N-terminal domain DN409_21345 PF02785 Biotin carboxylase C-terminal domain DN409_21350 PF00364 Biotin-requiring enzyme DN409_21360 PF12685 SpoIIIAH-like protein DN409_21370 PF09581 Stage III sporulation protein AF (Spore_III_AF) DN409_21375 PF09546 Stage III sporulation protein AE (spore_III_AE) DN409_21380 PF06686 Stage III sporulation protein AC/AD protein family DN409_21385 PF06686 Stage III sporulation protein AC/AD protein family DN409_21390 PF09548 Stage III sporulation protein AB (spore_III_AB) DN409_21420 PF01321 Creatinase/Prolidase N-terminal domain DN409_21420 PF00557 Metallopeptidase family M24 DN409_21430 PF11085 Conserved membrane protein YqhR DN409_21435 PF07136 Protein of unknown function (DUF1385) DN409_21445 PF13419 Haloacid dehalogenase-like hydrolase DN409_21475 PF03099 Biotin/lipoate A/B protein ligase family DN409_21480 PF00581 Rhodanese-like domain DN409_21490 PF00356 Bacterial regulatory proteins, lacI family DN409_21490 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_21500 PF00893 Small Multidrug Resistance protein DN409_21505 PF00893 Small Multidrug Resistance protein DN409_21535 PF00005 ABC transporter DN409_21540 PF00392 Bacterial regulatory proteins, gntR family DN409_21570 PF00176 SNF2 family N-terminal domain DN409_21570 PF00271 Helicase conserved C-terminal domain DN409_21575 PF11079 Bacterial protein YqhG of unknown function DN409_21595 PF14038 YqzE-like protein DN409_21625 PF07963 Prokaryotic N-terminal methylation motif DN409_21635 PF00482 Type II secretion system (T2SS), protein F DN409_21640 PF00437 Type II/IV secretion system protein DN409_21650 PF11117 Protein of unknown function (DUF2626) DN409_21655 PF00375 Sodium:dicarboxylate symporter family DN409_21690 PF03033 Glycosyltransferase family 28 N-terminal domain DN409_21690 PF04101 Glycosyltransferase family 28 C-terminal domain DN409_21695 PF02574 Homocysteine S-methyltransferase DN409_21695 PF02310 B12 binding domain DN409_21695 PF02607 B12 binding domain DN409_21695 PF00809 Pterin binding enzyme DN409_21695 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN409_21700 PF02574 Homocysteine S-methyltransferase DN409_21700 PF02219 Methylenetetrahydrofolate reductase DN409_21705 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_21710 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_21715 PF01022 Bacterial regulatory protein, arsR family DN409_21725 PF00753 Metallo-beta-lactamase superfamily DN409_21730 PF10958 Protein of unknown function (DUF2759) DN409_21735 PF00480 ROK family DN409_21740 PF06014 Bacterial protein of unknown function (DUF910) DN409_21745 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN409_21750 PF00471 Ribosomal protein L33 DN409_21755 PF00483 Nucleotidyl transferase DN409_21760 PF01895 PhoU domain DN409_21765 PF00005 ABC transporter DN409_21770 PF00528 Binding-protein-dependent transport system inner membrane component DN409_21775 PF00528 Binding-protein-dependent transport system inner membrane component DN409_21780 PF12849 PBP superfamily domain DN409_21790 PF07690 Major Facilitator Superfamily DN409_21795 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_21795 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_21820 PF01475 Ferric uptake regulator family DN409_21825 PF00950 ABC 3 transport family DN409_21830 PF00005 ABC transporter DN409_21835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_21835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_21840 PF11116 Protein of unknown function (DUF2624) DN409_21850 PF00270 DEAD/DEAH box helicase DN409_21850 PF00271 Helicase conserved C-terminal domain DN409_21865 PF01784 NIF3 (NGG1p interacting factor 3) DN409_21870 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN409_21875 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_21880 PF04545 Sigma-70, region 4 DN409_21880 PF04539 Sigma-70 region 3 DN409_21880 PF04542 Sigma-70 region 2 DN409_21880 PF03979 Sigma-70 factor, region 1.1 DN409_21880 PF00140 Sigma-70 factor, region 1.2 DN409_21885 PF10410 DnaB-helicase binding domain of primase DN409_21885 PF01807 CHC2 zinc finger DN409_21885 PF08275 DNA primase catalytic core, N-terminal domain DN409_21900 PF08279 HTH domain DN409_21900 PF00571 CBS domain DN409_21915 PF07650 KH domain DN409_21915 PF01926 50S ribosome-binding GTPase DN409_21920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_21925 PF01219 Prokaryotic diacylglycerol kinase DN409_21935 PF01966 HD domain DN409_21935 PF07697 7TM-HD extracellular DN409_21935 PF07698 7TM receptor with intracellular HD hydrolase DN409_21940 PF02562 PhoH-like protein DN409_21945 PF06898 Putative stage IV sporulation protein YqfD DN409_21950 PF07873 YabP family DN409_21955 PF09424 Yqey-like protein DN409_21960 PF01165 Ribosomal protein S21 DN409_21965 PF01938 TRAM domain DN409_21965 PF00919 Uncharacterized protein family UPF0004 DN409_21965 PF04055 Radical SAM superfamily DN409_21970 PF04452 RNA methyltransferase DN409_21990 PF01025 GrpE DN409_22000 PF06969 HemN C-terminal domain DN409_22000 PF04055 Radical SAM superfamily DN409_22005 PF01638 HxlR-like helix-turn-helix DN409_22030 PF06144 DNA polymerase III, delta subunit DN409_22035 PF14141 YqzM-like protein DN409_22045 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN409_22050 PF10531 SLBB domain DN409_22055 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN409_22055 PF03807 NADP oxidoreductase coenzyme F420-dependent DN409_22060 PF13649 Methyltransferase domain DN409_22070 PF01966 HD domain DN409_22080 PF01985 CRS1 / YhbY (CRM) domain DN409_22090 PF01926 50S ribosome-binding GTPase DN409_22110 PF04545 Sigma-70, region 4 DN409_22110 PF04542 Sigma-70 region 2 DN409_22120 PF04607 Region found in RelA / SpoT proteins DN409_22130 PF00245 Alkaline phosphatase DN409_22140 PF00561 alpha/beta hydrolase fold DN409_22140 PF08386 TAP-like protein DN409_22175 PF00082 Subtilase family DN409_22175 PF05922 Peptidase inhibitor I9 DN409_22175 PF13860 FlgD Ig-like domain DN409_22175 PF02225 PA domain DN409_22180 PF00351 Biopterin-dependent aromatic amino acid hydroxylase DN409_22185 PF01329 Pterin 4 alpha carbinolamine dehydratase DN409_22190 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN409_22195 PF07681 DoxX DN409_22225 PF00005 ABC transporter DN409_22230 PF01032 FecCD transport family DN409_22235 PF01497 Periplasmic binding protein DN409_22240 PF14143 YrhC-like protein DN409_22245 PF00465 Iron-containing alcohol dehydrogenase DN409_22245 PF00171 Aldehyde dehydrogenase family DN409_22250 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_22255 PF00291 Pyridoxal-phosphate dependent enzyme DN409_22270 PF10750 Protein of unknown function (DUF2536) DN409_22280 PF00905 Penicillin binding protein transpeptidase domain DN409_22280 PF03717 Penicillin-binding Protein dimerisation domain DN409_22285 PF01272 Transcription elongation factor, GreA/GreB, C-term DN409_22285 PF03449 Transcription elongation factor, N-terminal DN409_22310 PF02618 YceG-like family DN409_22315 PF06949 Protein of unknown function (DUF1292) DN409_22340 PF01594 AI-2E family transporter DN409_22360 PF13538 UvrD-like helicase C-terminal domain DN409_22360 PF14490 Helix-hairpin-helix containing domain DN409_22360 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN409_22375 PF00266 Aminotransferase class-V DN409_22380 PF02082 Transcriptional regulator DN409_22385 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN409_22385 PF12002 MgsA AAA+ ATPase C terminal DN409_22385 PF16193 AAA C-terminal domain DN409_22395 PF00899 ThiF family DN409_22405 PF13393 Histidyl-tRNA synthetase DN409_22405 PF03129 Anticodon binding domain DN409_22415 PF04607 Region found in RelA / SpoT proteins DN409_22415 PF02824 TGS domain DN409_22415 PF13291 ACT domain DN409_22425 PF02272 DHHA1 domain DN409_22425 PF17768 RecJ OB domain DN409_22425 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN409_22425 PF01368 DHH family DN409_22430 PF16916 Dimerisation domain of Zinc Transporter DN409_22430 PF01545 Cation efflux family DN409_22435 PF07549 SecD/SecF GG Motif DN409_22435 PF02355 Protein export membrane protein DN409_22445 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_22445 PF01943 Polysaccharide biosynthesis protein DN409_22450 PF04239 Protein of unknown function (DUF421) DN409_22460 PF02699 Preprotein translocase subunit DN409_22475 PF11146 Protein of unknown function (DUF2905) DN409_22490 PF01497 Periplasmic binding protein DN409_22510 PF01476 LysM domain DN409_22520 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DN409_22520 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DN409_22525 PF02910 Fumarate reductase flavoprotein C-term DN409_22525 PF00890 FAD binding domain DN409_22530 PF00266 Aminotransferase class-V DN409_22535 PF02829 3H domain DN409_22535 PF08279 HTH domain DN409_22540 PF03475 3-alpha domain DN409_22540 PF03473 MOSC domain DN409_22545 PF00800 Prephenate dehydratase DN409_22545 PF01842 ACT domain DN409_22550 PF02687 FtsX-like permease family DN409_22555 PF02687 FtsX-like permease family DN409_22560 PF00005 ABC transporter DN409_22565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_22570 PF00486 Transcriptional regulatory protein, C terminal DN409_22570 PF00072 Response regulator receiver domain DN409_22580 PF14682 Sporulation initiation phospho-transferase B, C-terminal DN409_22580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN409_22585 PF01016 Ribosomal L27 protein DN409_22590 PF04327 Cysteine protease Prp DN409_22595 PF00829 Ribosomal prokaryotic L21 protein DN409_22600 PF00575 S1 RNA binding domain DN409_22600 PF10150 Ribonuclease E/G family DN409_22610 PF02163 Peptidase family M50 DN409_22615 PF01551 Peptidase family M23 DN409_22620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN409_22635 PF04085 rod shape-determining protein MreC DN409_22665 PF02875 Mur ligase family, glutamate ligase domain DN409_22665 PF08245 Mur ligase middle domain DN409_22670 PF10458 Valyl tRNA synthetase tRNA binding arm DN409_22670 PF00133 tRNA synthetases class I (I, L, M and V) DN409_22670 PF08264 Anticodon-binding domain of tRNA DN409_22680 PF01476 LysM domain DN409_22690 PF00490 Delta-aminolevulinic acid dehydratase DN409_22695 PF02602 Uroporphyrinogen-III synthase HemD DN409_22705 PF01578 Cytochrome C assembly protein DN409_22715 PF01047 MarR family DN409_22720 PF02566 OsmC-like protein DN409_22730 PF00004 ATPase family associated with various cellular activities (AAA) DN409_22730 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN409_22730 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_22735 PF00004 ATPase family associated with various cellular activities (AAA) DN409_22735 PF05362 Lon protease (S16) C-terminal proteolytic domain DN409_22740 PF10431 C-terminal, D2-small domain, of ClpB protein DN409_22740 PF06689 ClpX C4-type zinc finger DN409_22740 PF07724 AAA domain (Cdc48 subfamily) DN409_22760 PF11724 YvbH-like oligomerisation region DN409_22760 PF08000 Bacterial PH domain DN409_22825 PF00589 Phage integrase family DN409_22850 PF00589 Phage integrase family DN409_22850 PF02899 Phage integrase, N-terminal SAM-like domain DN409_22865 PF12850 Calcineurin-like phosphoesterase superfamily domain DN409_22870 PF01725 Ham1 family DN409_22880 PF10646 Sporulation and spore germination DN409_22885 PF01177 Asp/Glu/Hydantoin racemase DN409_22890 PF00196 Bacterial regulatory proteins, luxR family DN409_22895 PF00860 Permease family DN409_22900 PF07969 Amidohydrolase family DN409_22905 PF04024 PspC domain DN409_22910 PF01381 Helix-turn-helix DN409_22910 PF07883 Cupin domain DN409_22915 PF13536 Putative multidrug resistance efflux transporter DN409_22920 PF00230 Major intrinsic protein DN409_22925 PF02082 Transcriptional regulator DN409_22935 PF00005 ABC transporter DN409_22935 PF13732 Domain of unknown function (DUF4162) DN409_22940 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) DN409_22945 PF00691 OmpA family DN409_22945 PF13677 Membrane MotB of proton-channel complex MotA/MotB DN409_22950 PF01618 MotA/TolQ/ExbB proton channel family DN409_22960 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_22965 PF03061 Thioesterase superfamily DN409_22970 PF13183 4Fe-4S dicluster domain DN409_22970 PF13085 2Fe-2S iron-sulfur cluster binding domain DN409_22975 PF02910 Fumarate reductase flavoprotein C-term DN409_22975 PF00890 FAD binding domain DN409_22980 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit DN409_22985 PF10702 Protein of unknown function (DUF2507) DN409_22995 PF00085 Thioredoxin DN409_23000 PF01012 Electron transfer flavoprotein domain DN409_23000 PF00766 Electron transfer flavoprotein FAD-binding domain DN409_23005 PF01012 Electron transfer flavoprotein domain DN409_23010 PF00378 Enoyl-CoA hydratase/isomerase DN409_23015 PF00440 Bacterial regulatory proteins, tetR family DN409_23015 PF08359 YsiA-like protein, C-terminal region DN409_23020 PF00501 AMP-binding enzyme DN409_23020 PF13193 AMP-binding enzyme C-terminal domain DN409_23035 PF05163 DinB family DN409_23055 PF00005 ABC transporter DN409_23060 PF00512 His Kinase A (phospho-acceptor) domain DN409_23060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_23065 PF00486 Transcriptional regulatory protein, C terminal DN409_23065 PF00072 Response regulator receiver domain DN409_23070 PF09962 Uncharacterized conserved protein (DUF2196) DN409_23075 PF17785 PUA-like domain DN409_23075 PF10672 S-adenosylmethionine-dependent methyltransferase DN409_23090 PF04203 Sortase domain DN409_23095 PF00005 ABC transporter DN409_23100 PF01032 FecCD transport family DN409_23105 PF01497 Periplasmic binding protein DN409_23110 PF05031 Iron Transport-associated domain DN409_23120 PF05031 Iron Transport-associated domain DN409_23125 PF05525 Branched-chain amino acid transport protein DN409_23130 PF00849 RNA pseudouridylate synthase DN409_23130 PF01479 S4 domain DN409_23140 PF02811 PHP domain DN409_23140 PF14716 Helix-hairpin-helix domain DN409_23140 PF14791 DNA polymerase beta thumb DN409_23145 PF02674 Colicin V production protein DN409_23175 PF01336 OB-fold nucleic acid binding domain DN409_23175 PF00152 tRNA synthetases class II (D, K and N) DN409_23180 PF03483 B3/4 domain DN409_23180 PF03484 tRNA synthetase B5 domain DN409_23180 PF03147 Ferredoxin-fold anticodon binding domain DN409_23180 PF01588 Putative tRNA binding domain DN409_23180 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN409_23190 PF00588 SpoU rRNA Methylase family DN409_23190 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN409_23200 PF01966 HD domain DN409_23225 PF07690 Major Facilitator Superfamily DN409_23235 PF00440 Bacterial regulatory proteins, tetR family DN409_23235 PF16859 Tetracyclin repressor-like, C-terminal domain DN409_23240 PF05343 M42 glutamyl aminopeptidase DN409_23255 PF01632 Ribosomal protein L35 DN409_23260 PF00707 Translation initiation factor IF-3, C-terminal domain DN409_23260 PF05198 Translation initiation factor IF-3, N-terminal domain DN409_23265 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_23265 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN409_23265 PF03129 Anticodon binding domain DN409_23265 PF02824 TGS domain DN409_23270 PF08812 YtxC-like family DN409_23275 PF01695 IstB-like ATP binding protein DN409_23275 PF07319 Primosomal protein DnaI N-terminus DN409_23280 PF07261 Replication initiation and membrane attachment DN409_23290 PF02675 S-adenosylmethionine decarboxylase DN409_23295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN409_23295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN409_23300 PF01121 Dephospho-CoA kinase DN409_23305 PF02659 Putative manganese efflux pump DN409_23310 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain DN409_23310 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain DN409_23310 PF06827 Zinc finger found in FPG and IleRS DN409_23315 PF00476 DNA polymerase family A DN409_23315 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN409_23315 PF01367 5'-3' exonuclease, C-terminal SAM fold DN409_23320 PF16736 Single Cache-like DN409_23320 PF00989 PAS fold DN409_23320 PF00512 His Kinase A (phospho-acceptor) domain DN409_23320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_23325 PF00072 Response regulator receiver domain DN409_23325 PF00486 Transcriptional regulatory protein, C terminal DN409_23345 PF00180 Isocitrate/isopropylmalate dehydrogenase DN409_23350 PF00285 Citrate synthase, C-terminal domain DN409_23360 PF04284 Protein of unknown function (DUF441) DN409_23365 PF01594 AI-2E family transporter DN409_23370 PF04186 FxsA cytoplasmic membrane protein DN409_23375 PF02887 Pyruvate kinase, alpha/beta domain DN409_23375 PF00391 PEP-utilising enzyme, mobile domain DN409_23375 PF00224 Pyruvate kinase, barrel domain DN409_23385 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN409_23395 PF00392 Bacterial regulatory proteins, gntR family DN409_23400 PF03949 Malic enzyme, NAD binding domain DN409_23400 PF00390 Malic enzyme, N-terminal domain DN409_23405 PF01336 OB-fold nucleic acid binding domain DN409_23405 PF02811 PHP domain DN409_23405 PF14579 Helix-hairpin-helix motif DN409_23405 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN409_23405 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN409_23410 PF14034 Sporulation protein YtrH DN409_23420 PF02272 DHHA1 domain DN409_23420 PF01368 DHH family DN409_23440 PF01636 Phosphotransferase enzyme family DN409_23450 PF00571 CBS domain DN409_23450 PF00392 Bacterial regulatory proteins, gntR family DN409_23450 PF07085 DRTGG domain DN409_23450 PF03061 Thioesterase superfamily DN409_23460 PF00557 Metallopeptidase family M24 DN409_23460 PF01321 Creatinase/Prolidase N-terminal domain DN409_23485 PF07883 Cupin domain DN409_23495 PF01381 Helix-turn-helix DN409_23505 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN409_23505 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN409_23515 PF00582 Universal stress protein family DN409_23555 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_23555 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_23560 PF12787 EcsC protein family DN409_23580 PF02384 N-6 DNA Methylase DN409_23585 PF08534 Redoxin DN409_23590 PF09579 Sporulation protein YtfJ (Spore_YtfJ) DN409_23600 PF01513 ATP-NAD kinase DN409_23605 PF07969 Amidohydrolase family DN409_23615 PF00501 AMP-binding enzyme DN409_23615 PF13193 AMP-binding enzyme C-terminal domain DN409_23620 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN409_23625 PF02568 Thiamine biosynthesis protein (ThiI) DN409_23625 PF02926 THUMP domain DN409_23630 PF00266 Aminotransferase class-V DN409_23650 PF00440 Bacterial regulatory proteins, tetR family DN409_23655 PF13185 GAF domain DN409_23660 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_23680 PF00579 tRNA synthetases class I (W and Y) DN409_23680 PF01479 S4 domain DN409_23690 PF04542 Sigma-70 region 2 DN409_23690 PF08281 Sigma-70, region 4 DN409_23700 PF14602 Hexapeptide repeat of succinyl-transferase DN409_23700 PF12464 Maltose acetyltransferase DN409_23705 PF00583 Acetyltransferase (GNAT) family DN409_23710 PF13193 AMP-binding enzyme C-terminal domain DN409_23710 PF00501 AMP-binding enzyme DN409_23715 PF00583 Acetyltransferase (GNAT) family DN409_23720 PF00571 CBS domain DN409_23725 PF00850 Histone deacetylase domain DN409_23730 PF00561 alpha/beta hydrolase fold DN409_23740 PF00072 Response regulator receiver domain DN409_23740 PF00486 Transcriptional regulatory protein, C terminal DN409_23745 PF16736 Single Cache-like DN409_23745 PF00989 PAS fold DN409_23745 PF00512 His Kinase A (phospho-acceptor) domain DN409_23745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_23750 PF12796 Ankyrin repeats (3 copies) DN409_23755 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DN409_23780 PF00356 Bacterial regulatory proteins, lacI family DN409_23785 PF00793 DAHP synthetase I family DN409_23785 PF01817 Chorismate mutase type II DN409_23790 PF00793 DAHP synthetase I family DN409_23790 PF01817 Chorismate mutase type II DN409_23795 PF07537 CamS sex pheromone cAM373 precursor DN409_23800 PF11009 Protein of unknown function (DUF2847) DN409_23810 PF02073 Thermophilic metalloprotease (M29) DN409_23830 PF13302 Acetyltransferase (GNAT) domain DN409_23845 PF01580 FtsK/SpoIIIE family DN409_23845 PF09397 Ftsk gamma domain DN409_23845 PF17854 FtsK alpha domain DN409_23850 PF01520 N-acetylmuramoyl-L-alanine amidase DN409_23850 PF08239 Bacterial SH3 domain DN409_23860 PF14794 Domain of unknown function (DUF4479) DN409_23860 PF01588 Putative tRNA binding domain DN409_23870 PF00085 Thioredoxin DN409_23875 PF01931 Protein of unknown function DUF84 DN409_23880 PF05343 M42 glutamyl aminopeptidase DN409_23890 PF00753 Metallo-beta-lactamase superfamily DN409_23900 PF14165 YtzH-like protein DN409_23905 PF01636 Phosphotransferase enzyme family DN409_23910 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN409_23910 PF00128 Alpha amylase, catalytic domain DN409_23910 PF17999 Pullulanase N1-terminal domain DN409_23915 PF02834 LigT like Phosphoesterase DN409_23920 PF01546 Peptidase family M20/M25/M40 DN409_23925 PF08220 DeoR-like helix-turn-helix domain DN409_23930 PF01479 S4 domain DN409_23930 PF00849 RNA pseudouridylate synthase DN409_23935 PF01943 Polysaccharide biosynthesis protein DN409_23935 PF14667 Polysaccharide biosynthesis C-terminal domain DN409_23945 PF07690 Major Facilitator Superfamily DN409_23950 PF01022 Bacterial regulatory protein, arsR family DN409_23955 PF08327 Activator of Hsp90 ATPase homolog 1-like protein DN409_23965 PF10957 Sporulation protein Cse60 DN409_23975 PF02559 CarD-like/TRCF domain DN409_23985 PF06800 Sugar transport protein DN409_24000 PF02391 MoaE protein DN409_24005 PF03205 Molybdopterin guanine dinucleotide synthesis protein B DN409_24010 PF00994 Probable molybdopterin binding domain DN409_24010 PF03453 MoeA N-terminal region (domain I and II) DN409_24010 PF03454 MoeA C-terminal region (domain IV) DN409_24020 PF00899 ThiF family DN409_24025 PF04055 Radical SAM superfamily DN409_24025 PF06463 Molybdenum Cofactor Synthesis C DN409_24050 PF00581 Rhodanese-like domain DN409_24060 PF00561 alpha/beta hydrolase fold DN409_24065 PF03323 Bacillus/Clostridium GerA spore germination protein DN409_24070 PF03845 Spore germination protein DN409_24075 PF05504 Spore germination B3/ GerAC like, C-terminal DN409_24105 PF07690 Major Facilitator Superfamily DN409_24110 PF00999 Sodium/hydrogen exchanger family DN409_24115 PF02080 TrkA-C domain DN409_24120 PF00589 Phage integrase family DN409_24130 PF00005 ABC transporter DN409_24140 PF10732 Protein of unknown function (DUF2524) DN409_24145 PF16199 Radical_SAM C-terminal domain DN409_24145 PF04055 Radical SAM superfamily DN409_24150 PF06962 Putative rRNA methylase DN409_24165 PF10776 Protein of unknown function (DUF2600) DN409_24170 PF12146 Serine aminopeptidase, S33 DN409_24175 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_24180 PF01569 PAP2 superfamily DN409_24185 PF13439 Glycosyltransferase Family 4 DN409_24185 PF00534 Glycosyl transferases group 1 DN409_24195 PF12323 Helix-turn-helix domain DN409_24195 PF07282 Putative transposase DNA-binding domain DN409_24195 PF01385 Probable transposase DN409_24205 PF00994 Probable molybdopterin binding domain DN409_24270 PF00512 His Kinase A (phospho-acceptor) domain DN409_24270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_24270 PF00989 PAS fold DN409_24270 PF13188 PAS domain DN409_24270 PF13426 PAS domain DN409_24275 PF00512 His Kinase A (phospho-acceptor) domain DN409_24275 PF02743 Cache domain DN409_24275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_24285 PF00561 alpha/beta hydrolase fold DN409_24285 PF08386 TAP-like protein DN409_24295 PF00884 Sulfatase DN409_24305 PF09962 Uncharacterized conserved protein (DUF2196) DN409_24325 PF00005 ABC transporter DN409_24330 PF00528 Binding-protein-dependent transport system inner membrane component DN409_24345 PF13419 Haloacid dehalogenase-like hydrolase DN409_24355 PF00293 NUDIX domain DN409_24400 PF00893 Small Multidrug Resistance protein DN409_24405 PF00893 Small Multidrug Resistance protein DN409_24410 PF00376 MerR family regulatory protein DN409_24410 PF09278 MerR, DNA binding DN409_24415 PF02664 S-Ribosylhomocysteinase (LuxS) DN409_24420 PF01809 Putative membrane protein insertion efficiency factor DN409_24425 PF00484 Carbonic anhydrase DN409_24430 PF01654 Cytochrome bd terminal oxidase subunit I DN409_24435 PF02322 Cytochrome bd terminal oxidase subunit II DN409_24440 PF10676 Spore germination protein gerPA/gerPF DN409_24455 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_24455 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_24475 PF04012 PspA/IM30 family DN409_24490 PF02421 Ferrous iron transport protein B DN409_24490 PF17910 FeoB cytosolic helical domain DN409_24490 PF07670 Nucleoside recognition DN409_24490 PF07664 Ferrous iron transport protein B C terminus DN409_24500 PF09515 Thiamine transporter protein (Thia_YuaJ) DN409_24505 PF00672 HAMP domain DN409_24505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_24505 PF00512 His Kinase A (phospho-acceptor) domain DN409_24510 PF00072 Response regulator receiver domain DN409_24510 PF00486 Transcriptional regulatory protein, C terminal DN409_24540 PF00781 Diacylglycerol kinase catalytic domain DN409_24580 PF09335 SNARE associated Golgi protein DN409_24585 PF00398 Ribosomal RNA adenine dimethylase DN409_24595 PF02687 FtsX-like permease family DN409_24600 PF00005 ABC transporter DN409_24605 PF12833 Helix-turn-helix domain DN409_24605 PF06445 GyrI-like small molecule binding domain DN409_24615 PF00005 ABC transporter DN409_24620 PF07853 Protein of unknown function (DUF1648) DN409_24620 PF13630 SdpI/YhfL protein family DN409_24625 PF01022 Bacterial regulatory protein, arsR family DN409_24630 PF00072 Response regulator receiver domain DN409_24630 PF00486 Transcriptional regulatory protein, C terminal DN409_24635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_24640 PF02687 FtsX-like permease family DN409_24645 PF02687 FtsX-like permease family DN409_24650 PF00005 ABC transporter DN409_24655 PF02687 FtsX-like permease family DN409_24665 PF02447 GntP family permease DN409_24680 PF07071 KDGP aldolase DN409_24685 PF03841 L-seryl-tRNA selenium transferase DN409_24690 PF01979 Amidohydrolase family DN409_24695 PF02557 D-alanyl-D-alanine carboxypeptidase DN409_24700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_24700 PF00512 His Kinase A (phospho-acceptor) domain DN409_24705 PF00486 Transcriptional regulatory protein, C terminal DN409_24705 PF00072 Response regulator receiver domain DN409_24710 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN409_24710 PF13378 Enolase C-terminal domain-like DN409_24720 PF00378 Enoyl-CoA hydratase/isomerase DN409_24725 PF12697 Alpha/beta hydrolase family DN409_24735 PF00425 chorismate binding enzyme DN409_24740 PF01040 UbiA prenyltransferase family DN409_24745 PF01258 Prokaryotic dksA/traR C4-type zinc finger DN409_24750 PF00313 'Cold-shock' DNA-binding domain DN409_24760 PF13411 MerR HTH family regulatory protein DN409_24770 PF00343 Carbohydrate phosphorylase DN409_24775 PF08323 Starch synthase catalytic domain DN409_24775 PF00534 Glycosyl transferases group 1 DN409_24780 PF00483 Nucleotidyl transferase DN409_24800 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_24800 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_24940 PF02308 MgtC family DN409_24945 PF07885 Ion channel DN409_24945 PF02254 TrkA-N domain DN409_24950 PF08868 YugN-like family DN409_24965 PF04070 Domain of unknown function (DUF378) DN409_24970 PF00575 S1 RNA binding domain DN409_24975 PF00155 Aminotransferase class I and II DN409_24980 PF01037 Lrp/AsnC ligand binding domain DN409_24985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN409_24985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN409_24990 PF08386 TAP-like protein DN409_24990 PF00561 alpha/beta hydrolase fold DN409_25000 PF00155 Aminotransferase class I and II DN409_25010 PF08810 Kinase associated protein B DN409_25015 PF00929 Exonuclease DN409_25020 PF03600 Citrate transporter DN409_25035 PF03129 Anticodon binding domain DN409_25035 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN409_25040 PF03061 Thioesterase superfamily DN409_25050 PF02632 BioY family DN409_25055 PF00483 Nucleotidyl transferase DN409_25060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN409_25060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN409_25060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN409_25060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN409_25065 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN409_25065 PF10372 Bacterial membrane-spanning protein N-terminus DN409_25075 PF06725 3D domain DN409_25085 PF13344 Haloacid dehalogenase-like hydrolase DN409_25085 PF00293 NUDIX domain DN409_25090 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_25100 PF06445 GyrI-like small molecule binding domain DN409_25115 PF04463 Protein of unknown function (DUF523) DN409_25140 PF01521 Iron-sulphur cluster biosynthesis DN409_25155 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_25160 PF00005 ABC transporter DN409_25160 PF03412 Peptidase C39 family DN409_25160 PF00664 ABC transporter transmembrane region DN409_25165 PF03649 Uncharacterised protein family (UPF0014) DN409_25170 PF08274 PhnA Zinc-Ribbon DN409_25170 PF03831 PhnA domain DN409_25195 PF07315 Protein of unknown function (DUF1462) DN409_25200 PF01106 NifU-like domain DN409_25215 PF04608 Phosphatidylglycerophosphatase A DN409_25235 PF12704 MacB-like periplasmic core domain DN409_25235 PF00005 ABC transporter DN409_25235 PF02687 FtsX-like permease family DN409_25240 PF02525 Flavodoxin-like fold DN409_25250 PF13344 Haloacid dehalogenase-like hydrolase DN409_25260 PF01934 Protein of unknown function DUF86 DN409_25265 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN409_25285 PF06265 Protein of unknown function (DUF1027) DN409_25290 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) DN409_25295 PF07739 TipAS antibiotic-recognition domain DN409_25295 PF13411 MerR HTH family regulatory protein DN409_25300 PF10086 YhfC intramembrane metalloprotease DN409_25325 PF01551 Peptidase family M23 DN409_25330 PF09560 Sporulation protein YunB (Spo_YunB) DN409_25335 PF08827 Domain of unknown function (DUF1805) DN409_25340 PF02872 5'-nucleotidase, C-terminal domain DN409_25345 PF01458 Uncharacterized protein family (UPF0051) DN409_25350 PF01592 NifU-like N terminal domain DN409_25355 PF00266 Aminotransferase class-V DN409_25360 PF01458 Uncharacterized protein family (UPF0051) DN409_25365 PF00005 ABC transporter DN409_25370 PF03180 NLPA lipoprotein DN409_25375 PF03180 NLPA lipoprotein DN409_25380 PF00528 Binding-protein-dependent transport system inner membrane component DN409_25385 PF09383 NIL domain DN409_25385 PF00005 ABC transporter DN409_25395 PF00085 Thioredoxin DN409_25400 PF01751 Toprim domain DN409_25410 PF03960 ArsC family DN409_25445 PF00440 Bacterial regulatory proteins, tetR family DN409_25445 PF13305 Tetracyclin repressor-like, C-terminal domain DN409_25450 PF00753 Metallo-beta-lactamase superfamily DN409_25455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_25455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_25455 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_25460 PF00108 Thiolase, N-terminal domain DN409_25460 PF02803 Thiolase, C-terminal domain DN409_25465 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN409_25465 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN409_25465 PF00378 Enoyl-CoA hydratase/isomerase DN409_25470 PF14115 YuzL-like protein DN409_25475 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_25475 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_25480 PF01619 Proline dehydrogenase DN409_25485 PF10835 Protein of unknown function (DUF2573) DN409_25490 PF01910 Thiamine-binding protein DN409_25495 PF02743 Cache domain DN409_25495 PF00672 HAMP domain DN409_25495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_25510 PF07690 Major Facilitator Superfamily DN409_25515 PF13520 Amino acid permease DN409_25530 PF02096 60Kd inner membrane protein DN409_25540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN409_25540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN409_25570 PF09335 SNARE associated Golgi protein DN409_25580 PF17969 L,D-transpeptidase C-terminal domain DN409_25580 PF03734 L,D-transpeptidase catalytic domain DN409_25585 PF00072 Response regulator receiver domain DN409_25585 PF00486 Transcriptional regulatory protein, C terminal DN409_25590 PF16736 Single Cache-like DN409_25590 PF00512 His Kinase A (phospho-acceptor) domain DN409_25590 PF00989 PAS fold DN409_25590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_25610 PF02743 Cache domain DN409_25610 PF00672 HAMP domain DN409_25610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_25615 PF02743 Cache domain DN409_25615 PF00672 HAMP domain DN409_25615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_25620 PF01883 Iron-sulfur cluster assembly protein DN409_25625 PF03413 Peptidase propeptide and YPEB domain DN409_25625 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_25625 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_25625 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_25630 PF02678 Pirin DN409_25630 PF17954 Quercetinase C-terminal cupin domain DN409_25635 PF01047 MarR family DN409_25645 PF09335 SNARE associated Golgi protein DN409_25650 PF00999 Sodium/hydrogen exchanger family DN409_25655 PF02080 TrkA-C domain DN409_25660 PF01235 Sodium:alanine symporter family DN409_25665 PF00210 Ferritin-like domain DN409_25675 PF05163 DinB family DN409_25680 PF03641 Possible lysine decarboxylase DN409_25690 PF00210 Ferritin-like domain DN409_25695 PF04235 Protein of unknown function (DUF418) DN409_25700 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_25700 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_25705 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_25705 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_25710 PF01235 Sodium:alanine symporter family DN409_25715 PF13460 NAD(P)H-binding DN409_25745 PF00248 Aldo/keto reductase family DN409_25750 PF07690 Major Facilitator Superfamily DN409_25755 PF01638 HxlR-like helix-turn-helix DN409_25760 PF07849 Protein of unknown function (DUF1641) DN409_25765 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_25770 PF01479 S4 domain DN409_25770 PF00579 tRNA synthetases class I (W and Y) DN409_25775 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN409_25775 PF01565 FAD binding domain DN409_25785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_25785 PF00672 HAMP domain DN409_25785 PF17202 Single cache domain 3 DN409_25795 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN409_25800 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN409_25810 PF13443 Cro/C1-type HTH DNA-binding domain DN409_25815 PF11188 Protein of unknown function (DUF2975) DN409_25825 PF13302 Acetyltransferase (GNAT) domain DN409_25830 PF06146 Phosphate-starvation-inducible E DN409_25835 PF01638 HxlR-like helix-turn-helix DN409_25840 PF00881 Nitroreductase family DN409_25845 PF00296 Luciferase-like monooxygenase DN409_25850 PF05979 Bacterial protein of unknown function (DUF896) DN409_25855 PF01037 Lrp/AsnC ligand binding domain DN409_25860 PF00484 Carbonic anhydrase DN409_25865 PF02560 Cyanate lyase C-terminal domain DN409_25870 PF00860 Permease family DN409_25875 PF01289 Thiol-activated cytolysin DN409_25875 PF17440 Thiol-activated cytolysin beta sandwich domain DN409_25880 PF00005 ABC transporter DN409_25885 PF01032 FecCD transport family DN409_25890 PF01032 FecCD transport family DN409_25900 PF00072 Response regulator receiver domain DN409_25900 PF00486 Transcriptional regulatory protein, C terminal DN409_25930 PF00575 S1 RNA binding domain DN409_25930 PF00773 RNB domain DN409_25930 PF08206 Ribonuclease B OB domain DN409_25930 PF17876 Cold shock domain DN409_25935 PF12146 Serine aminopeptidase, S33 DN409_25940 PF03840 Preprotein translocase SecG subunit DN409_25945 PF04172 LrgB-like family DN409_25950 PF03788 LrgA family DN409_25955 PF01156 Inosine-uridine preferring nucleoside hydrolase DN409_25965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN409_25965 PF01676 Metalloenzyme superfamily DN409_25980 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN409_25980 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN409_25985 PF04198 Putative sugar-binding domain DN409_25995 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN409_25995 PF04963 Sigma-54 factor, core binding domain DN409_25995 PF04552 Sigma-54, DNA binding domain DN409_26015 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_26020 PF07451 Stage V sporulation protein AD (SpoVAD) DN409_26025 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN409_26035 PF04239 Protein of unknown function (DUF421) DN409_26040 PF00574 Clp protease DN409_26050 PF00381 PTS HPr component phosphorylation site DN409_26060 PF01933 Uncharacterised protein family UPF0052 DN409_26070 PF00293 NUDIX domain DN409_26080 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN409_26090 PF14602 Hexapeptide repeat of succinyl-transferase DN409_26110 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV DN409_26120 PF17760 UvrA interaction domain DN409_26120 PF17755 UvrA DNA-binding domain DN409_26120 PF00005 ABC transporter DN409_26125 PF12344 Ultra-violet resistance protein B DN409_26125 PF00271 Helicase conserved C-terminal domain DN409_26125 PF04851 Type III restriction enzyme, res subunit DN409_26125 PF17757 UvrB interaction domain DN409_26125 PF02151 UvrB/uvrC motif DN409_26145 PF07739 TipAS antibiotic-recognition domain DN409_26145 PF13411 MerR HTH family regulatory protein DN409_26175 PF03601 Conserved hypothetical protein 698 DN409_26180 PF03466 LysR substrate binding domain DN409_26180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_26190 PF03358 NADPH-dependent FMN reductase DN409_26200 PF01906 Putative heavy-metal-binding DN409_26205 PF00664 ABC transporter transmembrane region DN409_26205 PF00005 ABC transporter DN409_26210 PF17820 PDZ domain DN409_26215 PF17820 PDZ domain DN409_26215 PF03572 Peptidase family S41 DN409_26215 PF01471 Putative peptidoglycan binding domain DN409_26220 PF02687 FtsX-like permease family DN409_26220 PF18075 FtsX extracellular domain DN409_26225 PF00005 ABC transporter DN409_26230 PF13442 Cytochrome C oxidase, cbb3-type, subunit III DN409_26245 PF07516 SecA Wing and Scaffold domain DN409_26245 PF01043 SecA preprotein cross-linking domain DN409_26245 PF07517 SecA DEAD-like domain DN409_26245 PF02810 SEC-C motif DN409_26260 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN409_26260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN409_26265 PF00313 'Cold-shock' DNA-binding domain DN409_26275 PF00271 Helicase conserved C-terminal domain DN409_26275 PF04851 Type III restriction enzyme, res subunit DN409_26280 PF01476 LysM domain DN409_26280 PF00877 NlpC/P60 family DN409_26285 PF01638 HxlR-like helix-turn-helix DN409_26290 PF02645 Uncharacterised protein, DegV family COG1307 DN409_26295 PF09186 Domain of unknown function (DUF1949) DN409_26295 PF01205 Uncharacterized protein family UPF0029 DN409_26300 PF03816 Cell envelope-related transcriptional attenuator domain DN409_26305 PF02350 UDP-N-acetylglucosamine 2-epimerase DN409_26310 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_26310 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_26310 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_26315 PF00953 Glycosyl transferase family 4 DN409_26325 PF03610 PTS system fructose IIA component DN409_26325 PF00158 Sigma-54 interaction domain DN409_26325 PF00874 PRD domain DN409_26340 PF04794 YdjC-like protein DN409_26345 PF02056 Family 4 glycosyl hydrolase DN409_26345 PF11975 Family 4 glycosyl hydrolase C-terminal domain DN409_26350 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_26355 PF02378 Phosphotransferase system, EIIC DN409_26360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_26370 PF02675 S-adenosylmethionine decarboxylase DN409_26375 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DN409_26380 PF02378 Phosphotransferase system, EIIC DN409_26385 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DN409_26390 PF00375 Sodium:dicarboxylate symporter family DN409_26410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_26410 PF03466 LysR substrate binding domain DN409_26420 PF01654 Cytochrome bd terminal oxidase subunit I DN409_26425 PF02322 Cytochrome bd terminal oxidase subunit II DN409_26430 PF02040 Arsenical pump membrane protein DN409_26440 PF02652 L-lactate permease DN409_26450 PF09988 Uncharacterized metal-binding protein (DUF2227) DN409_26465 PF00884 Sulfatase DN409_26470 PF01063 Amino-transferase class IV DN409_26475 PF01476 LysM domain DN409_26475 PF00877 NlpC/P60 family DN409_26480 PF07662 Na+ dependent nucleoside transporter C-terminus DN409_26480 PF01773 Na+ dependent nucleoside transporter N-terminus DN409_26495 PF02028 BCCT, betaine/carnitine/choline family transporter DN409_26505 PF06725 3D domain DN409_26505 PF01476 LysM domain DN409_26530 PF04434 SWIM zinc finger DN409_26535 PF12419 SNF2 Helicase protein DN409_26535 PF00271 Helicase conserved C-terminal domain DN409_26535 PF00176 SNF2 family N-terminal domain DN409_26570 PF04893 Yip1 domain DN409_26575 PF12704 MacB-like periplasmic core domain DN409_26575 PF02687 FtsX-like permease family DN409_26580 PF00005 ABC transporter DN409_26605 PF07690 Major Facilitator Superfamily DN409_26620 PF00512 His Kinase A (phospho-acceptor) domain DN409_26620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_26620 PF00672 HAMP domain DN409_26625 PF00072 Response regulator receiver domain DN409_26625 PF00486 Transcriptional regulatory protein, C terminal DN409_26640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_26640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_26640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_26655 PF00534 Glycosyl transferases group 1 DN409_26655 PF13439 Glycosyltransferase Family 4 DN409_26670 PF00534 Glycosyl transferases group 1 DN409_26675 PF02350 UDP-N-acetylglucosamine 2-epimerase DN409_26680 PF01370 NAD dependent epimerase/dehydratase family DN409_26685 PF02719 Polysaccharide biosynthesis protein DN409_26685 PF08485 Polysaccharide biosynthesis protein C-terminal DN409_26690 PF13579 Glycosyl transferase 4-like domain DN409_26695 PF00132 Bacterial transferase hexapeptide (six repeats) DN409_26700 PF02397 Bacterial sugar transferase DN409_26705 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_26710 PF02719 Polysaccharide biosynthesis protein DN409_26715 PF00483 Nucleotidyl transferase DN409_26725 PF13614 AAA domain DN409_26730 PF02706 Chain length determinant protein DN409_26730 PF13807 G-rich domain on putative tyrosine kinase DN409_26735 PF13614 AAA domain DN409_26740 PF07977 FabA-like domain DN409_26750 PF12116 Stage III sporulation protein D DN409_26760 PF01551 Peptidase family M23 DN409_26770 PF00005 ABC transporter DN409_26775 PF00072 Response regulator receiver domain DN409_26775 PF04397 LytTr DNA-binding domain DN409_26780 PF08486 Stage II sporulation protein DN409_26785 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_26795 PF06612 Protein of unknown function (DUF1146) DN409_26800 PF00361 Proton-conducting membrane transporter DN409_26805 PF00361 Proton-conducting membrane transporter DN409_26810 PF00361 Proton-conducting membrane transporter DN409_26810 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus DN409_26810 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus DN409_26820 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 DN409_26840 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit DN409_26855 PF00563 EAL domain DN409_26855 PF03707 Bacterial signalling protein N terminal repeat DN409_26855 PF00990 Diguanylate cyclase, GGDEF domain DN409_26900 PF00137 ATP synthase subunit C DN409_26905 PF00119 ATP synthase A chain DN409_26910 PF03899 ATP synthase I chain DN409_26935 PF04260 Protein of unknown function (DUF436) DN409_26940 PF02502 Ribose/Galactose Isomerase DN409_26945 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN409_26950 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DN409_26955 PF07681 DoxX DN409_26960 PF01613 Flavin reductase like domain DN409_26975 PF03481 Putative GTP-binding controlling metal-binding DN409_26975 PF01300 Telomere recombination DN409_26985 PF09551 Stage II sporulation protein R (spore_II_R) DN409_26990 PF17827 PrmC N-terminal domain DN409_26990 PF13847 Methyltransferase domain DN409_27005 PF01197 Ribosomal protein L31 DN409_27015 PF07498 Rho termination factor, N-terminal domain DN409_27015 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN409_27015 PF07497 Rho termination factor, RNA-binding domain DN409_27020 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded DN409_27025 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN409_27030 PF01116 Fructose-bisphosphate aldolase class-II DN409_27035 PF00072 Response regulator receiver domain DN409_27040 PF10740 Domain of unknown function (DUF2529) DN409_27050 PF05066 HB1, ASXL, restriction endonuclease HTH domain DN409_27060 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_27060 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_27060 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_27065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_27065 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_27065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_27070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN409_27070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN409_27075 PF02803 Thiolase, C-terminal domain DN409_27075 PF00108 Thiolase, N-terminal domain DN409_27080 PF13183 4Fe-4S dicluster domain DN409_27080 PF02754 Cysteine-rich domain DN409_27085 PF13091 PLD-like domain DN409_27095 PF03707 Bacterial signalling protein N terminal repeat DN409_27095 PF00990 Diguanylate cyclase, GGDEF domain DN409_27095 PF00563 EAL domain DN409_27110 PF02868 Thermolysin metallopeptidase, alpha-helical domain DN409_27110 PF03413 Peptidase propeptide and YPEB domain DN409_27110 PF01447 Thermolysin metallopeptidase, catalytic domain DN409_27110 PF07504 Fungalysin/Thermolysin Propeptide Motif DN409_27115 PF00196 Bacterial regulatory proteins, luxR family DN409_27115 PF00072 Response regulator receiver domain DN409_27120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_27120 PF07730 Histidine kinase DN409_27130 PF00005 ABC transporter DN409_27135 PF00557 Metallopeptidase family M24 DN409_27145 PF04389 Peptidase family M28 DN409_27145 PF02225 PA domain DN409_27160 PF00750 tRNA synthetases class I (R) DN409_27160 PF05746 DALR anticodon binding domain DN409_27160 PF03485 Arginyl tRNA synthetase N terminal domain DN409_27165 PF09148 Domain of unknown function (DUF1934) DN409_27170 PF02016 LD-carboxypeptidase N-terminal domain DN409_27170 PF17676 LD-carboxypeptidase C-terminal domain DN409_27190 PF00491 Arginase family DN409_27200 PF07690 Major Facilitator Superfamily DN409_27205 PF13411 MerR HTH family regulatory protein DN409_27210 PF03009 Glycerophosphoryl diester phosphodiesterase family DN409_27215 PF00905 Penicillin binding protein transpeptidase domain DN409_27215 PF00912 Transglycosylase DN409_27220 PF08741 YwhD family DN409_27225 PF02163 Peptidase family M50 DN409_27230 PF01361 Tautomerase enzyme DN409_27235 PF01966 HD domain DN409_27240 PF01497 Periplasmic binding protein DN409_27245 PF00005 ABC transporter DN409_27250 PF01032 FecCD transport family DN409_27255 PF01032 FecCD transport family DN409_27270 PF03099 Biotin/lipoate A/B protein ligase family DN409_27275 PF01515 Phosphate acetyl/butaryl transferase DN409_27285 PF07943 Penicillin-binding protein 5, C-terminal domain DN409_27285 PF00768 D-alanyl-D-alanine carboxypeptidase DN409_27290 PF07486 Cell Wall Hydrolase DN409_27295 PF09671 Spore coat protein (Spore_GerQ) DN409_27300 PF04241 Protein of unknown function (DUF423) DN409_27315 PF00860 Permease family DN409_27325 PF12823 Domain of unknown function (DUF3817) DN409_27335 PF12679 ABC-2 family transporter protein DN409_27340 PF00005 ABC transporter DN409_27345 PF13472 GDSL-like Lipase/Acylhydrolase family DN409_27350 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family DN409_27350 PF00356 Bacterial regulatory proteins, lacI family DN409_27360 PF01842 ACT domain DN409_27360 PF03447 Homoserine dehydrogenase, NAD binding domain DN409_27360 PF00742 Homoserine dehydrogenase DN409_27370 PF01053 Cys/Met metabolism PLP-dependent enzyme DN409_27380 PF13419 Haloacid dehalogenase-like hydrolase DN409_27385 PF00027 Cyclic nucleotide-binding domain DN409_27390 PF02525 Flavodoxin-like fold DN409_27395 PF00196 Bacterial regulatory proteins, luxR family DN409_27395 PF00072 Response regulator receiver domain DN409_27400 PF07730 Histidine kinase DN409_27400 PF13185 GAF domain DN409_27405 PF08543 Phosphomethylpyrimidine kinase DN409_27410 PF07694 5TMR of 5TMR-LYT DN409_27410 PF00990 Diguanylate cyclase, GGDEF domain DN409_27415 PF04328 Selenoprotein, putative DN409_27420 PF02554 Carbon starvation protein CstA DN409_27420 PF13722 5TM C-terminal transporter carbon starvation CstA DN409_27425 PF04397 LytTr DNA-binding domain DN409_27425 PF00072 Response regulator receiver domain DN409_27430 PF07690 Major Facilitator Superfamily DN409_27435 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN409_27440 PF00534 Glycosyl transferases group 1 DN409_27440 PF08323 Starch synthase catalytic domain DN409_27450 PF03458 UPF0126 domain DN409_27455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_27465 PF03061 Thioesterase superfamily DN409_27470 PF00535 Glycosyl transferase family 2 DN409_27480 PF00535 Glycosyl transferase family 2 DN409_27490 PF12848 ABC transporter DN409_27490 PF00005 ABC transporter DN409_27495 PF00440 Bacterial regulatory proteins, tetR family DN409_27500 PF00873 AcrB/AcrD/AcrF family DN409_27505 PF01641 SelR domain DN409_27505 PF01625 Peptide methionine sulfoxide reductase DN409_27510 PF01594 AI-2E family transporter DN409_27515 PF04172 LrgB-like family DN409_27525 PF00072 Response regulator receiver domain DN409_27525 PF04397 LytTr DNA-binding domain DN409_27530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_27530 PF13492 GAF domain DN409_27530 PF06580 Histidine kinase DN409_27530 PF07694 5TMR of 5TMR-LYT DN409_27535 PF07690 Major Facilitator Superfamily DN409_27540 PF02028 BCCT, betaine/carnitine/choline family transporter DN409_27545 PF02898 Nitric oxide synthase, oxygenase domain DN409_27555 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN409_27555 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN409_27565 PF02293 AmiS/UreI family transporter DN409_27605 PF16363 GDP-mannose 4,6 dehydratase DN409_27610 PF03006 Haemolysin-III related DN409_27620 PF00270 DEAD/DEAH box helicase DN409_27620 PF00271 Helicase conserved C-terminal domain DN409_27620 PF03880 DbpA RNA binding domain DN409_27630 PF00478 IMP dehydrogenase / GMP reductase domain DN409_27635 PF08439 Oligopeptidase F DN409_27635 PF01432 Peptidase family M3 DN409_27655 PF13180 PDZ domain DN409_27660 PF00753 Metallo-beta-lactamase superfamily DN409_27665 PF09648 YycH protein DN409_27675 PF13426 PAS domain DN409_27675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_27675 PF00672 HAMP domain DN409_27675 PF00512 His Kinase A (phospho-acceptor) domain DN409_27680 PF00486 Transcriptional regulatory protein, C terminal DN409_27680 PF00072 Response regulator receiver domain DN409_27705 PF00709 Adenylosuccinate synthetase DN409_27710 PF03796 DnaB-like helicase C terminal domain DN409_27710 PF00772 DnaB-like helicase N terminal domain DN409_27720 PF02272 DHHA1 domain DN409_27720 PF01368 DHH family DN409_27725 PF09991 Predicted membrane protein (DUF2232) DN409_27730 PF01084 Ribosomal protein S18 DN409_27735 PF00436 Single-strand binding protein family DN409_27745 PF06071 Protein of unknown function (DUF933) DN409_27745 PF01926 50S ribosome-binding GTPase DN409_27750 PF06107 Bacterial protein of unknown function (DUF951) DN409_27755 PF00924 Mechanosensitive ion channel DN409_27760 PF06866 Protein of unknown function (DUF1256) DN409_27765 PF17762 HTH domain found in ParB protein DN409_27765 PF02195 ParB-like nuclease domain DN409_27770 PF13614 AAA domain DN409_27795 PF14804 Jag N-terminus DN409_27795 PF01424 R3H domain DN409_27800 PF02096 60Kd inner membrane protein DN409_27810 PF00468 Ribosomal protein L34 DN409_27830 PF00512 His Kinase A (phospho-acceptor) domain DN409_27830 PF00989 PAS fold DN409_27830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_27830 PF13188 PAS domain DN409_27830 PF13426 PAS domain DN409_27850 PF07282 Putative transposase DNA-binding domain DN409_27850 PF01385 Probable transposase DN409_27850 PF12323 Helix-turn-helix domain DN409_27910 PF00881 Nitroreductase family DN409_27930 PF00005 ABC transporter DN409_27940 PF01609 Transposase DDE domain DN409_27950 PF00817 impB/mucB/samB family DN409_27950 PF11799 impB/mucB/samB family C-terminal domain DN409_27950 PF11798 IMS family HHH motif DN409_27965 PF01580 FtsK/SpoIIIE family DN409_27965 PF09397 Ftsk gamma domain DN409_27965 PF17854 FtsK alpha domain DN409_28050 PF00144 Beta-lactamase DN409_28055 PF00144 Beta-lactamase DN409_28070 PF01022 Bacterial regulatory protein, arsR family DN409_28080 PF00753 Metallo-beta-lactamase superfamily DN409_28080 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN409_28100 PF00440 Bacterial regulatory proteins, tetR family DN409_28105 PF13537 Glutamine amidotransferase domain DN409_28105 PF00733 Asparagine synthase DN409_28115 PF07282 Putative transposase DNA-binding domain DN409_28115 PF12323 Helix-turn-helix domain DN409_28115 PF01385 Probable transposase DN409_28155 PF04225 Opacity-associated protein A LysM-like domain DN409_28155 PF01551 Peptidase family M23 DN409_28185 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN409_28185 PF13457 GW (Gly-Tryp) dipeptide domain DN409_28210 PF02463 RecF/RecN/SMC N terminal domain DN409_28215 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) DN409_28230 PF01757 Acyltransferase family DN409_28250 PF00692 dUTPase DN409_28265 PF10676 Spore germination protein gerPA/gerPF DN409_28300 PF00535 Glycosyl transferase family 2 DN409_28305 PF00535 Glycosyl transferase family 2 DN409_28310 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DN409_28315 PF02719 Polysaccharide biosynthesis protein DN409_28320 PF16363 GDP-mannose 4,6 dehydratase DN409_28325 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_28330 PF02348 Cytidylyltransferase DN409_28345 PF08666 SAF domain DN409_28345 PF03102 NeuB family DN409_28350 PF12996 DUF based on E. rectale Gene description (DUF3880) DN409_28370 PF00555 delta endotoxin DN409_28370 PF03944 delta endotoxin DN409_28370 PF03945 delta endotoxin, N-terminal domain DN409_28400 PF04397 LytTr DNA-binding domain DN409_28420 PF00072 Response regulator receiver domain DN409_28420 PF00486 Transcriptional regulatory protein, C terminal DN409_28425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_28430 PF04235 Protein of unknown function (DUF418) DN409_28430 PF07786 Protein of unknown function (DUF1624) DN409_28440 PF00005 ABC transporter DN409_28445 PF02687 FtsX-like permease family DN409_28455 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_28455 PF18277 AbrB C-terminal domain DN409_28465 PF17209 Hfq protein DN409_28470 PF00041 Fibronectin type III domain DN409_28470 PF00704 Glycosyl hydrolases family 18 DN409_28470 PF00553 Cellulose binding domain DN409_28475 PF00041 Fibronectin type III domain DN409_28475 PF00704 Glycosyl hydrolases family 18 DN409_28475 PF00553 Cellulose binding domain DN409_28485 PF00144 Beta-lactamase DN409_28495 PF07690 Major Facilitator Superfamily DN409_28500 PF00550 Phosphopantetheine attachment site DN409_28500 PF13193 AMP-binding enzyme C-terminal domain DN409_28500 PF00501 AMP-binding enzyme DN409_28500 PF00668 Condensation domain DN409_28505 PF07993 Male sterility protein DN409_28505 PF00501 AMP-binding enzyme DN409_28505 PF00550 Phosphopantetheine attachment site DN409_28505 PF00668 Condensation domain DN409_28505 PF13193 AMP-binding enzyme C-terminal domain DN409_28510 PF00668 Condensation domain DN409_28510 PF00550 Phosphopantetheine attachment site DN409_28510 PF00501 AMP-binding enzyme DN409_28510 PF13193 AMP-binding enzyme C-terminal domain DN409_28515 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_28520 PF00975 Thioesterase domain DN409_28535 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_28535 PF18277 AbrB C-terminal domain DN409_28540 PF10676 Spore germination protein gerPA/gerPF DN409_28550 PF10676 Spore germination protein gerPA/gerPF DN409_28570 PF00589 Phage integrase family DN409_28605 PF03062 MBOAT, membrane-bound O-acyltransferase family DN409_28615 PF07690 Major Facilitator Superfamily DN409_28620 PF00857 Isochorismatase family DN409_28625 PF00440 Bacterial regulatory proteins, tetR family DN409_28635 PF13610 DDE domain DN409_28650 PF13610 DDE domain DN409_28660 PF00589 Phage integrase family DN409_28660 PF02899 Phage integrase, N-terminal SAM-like domain DN409_28680 PF01022 Bacterial regulatory protein, arsR family DN409_28685 PF00877 NlpC/P60 family DN409_28685 PF08239 Bacterial SH3 domain DN409_28685 PF01476 LysM domain DN409_28695 PF07859 alpha/beta hydrolase fold DN409_28700 PF00797 N-acetyltransferase DN409_28705 PF13610 DDE domain DN409_28710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_28710 PF03466 LysR substrate binding domain DN409_28725 PF13529 Peptidase_C39 like family DN409_28730 PF00072 Response regulator receiver domain DN409_28730 PF00486 Transcriptional regulatory protein, C terminal DN409_28735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_28735 PF00512 His Kinase A (phospho-acceptor) domain DN409_28735 PF00989 PAS fold DN409_28735 PF16736 Single Cache-like DN409_28740 PF00388 Phosphatidylinositol-specific phospholipase C, X domain DN409_28755 PF00486 Transcriptional regulatory protein, C terminal DN409_28755 PF00072 Response regulator receiver domain DN409_28760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN409_28760 PF00512 His Kinase A (phospho-acceptor) domain DN409_28780 PF12323 Helix-turn-helix domain DN409_28780 PF01385 Probable transposase DN409_28780 PF07282 Putative transposase DNA-binding domain DN409_28785 PF00324 Amino acid permease DN409_28790 PF02308 MgtC family DN409_28800 PF00561 alpha/beta hydrolase fold DN409_28800 PF08386 TAP-like protein DN409_28810 PF00216 Bacterial DNA-binding protein DN409_28820 PF02743 Cache domain DN409_28820 PF00672 HAMP domain DN409_28820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DN409_28845 PF12833 Helix-turn-helix domain DN409_28890 PF00589 Phage integrase family DN409_28890 PF13495 Phage integrase, N-terminal SAM-like domain DN409_28900 PF13610 DDE domain DN409_28905 PF17209 Hfq protein DN409_28920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_28920 PF18277 AbrB C-terminal domain DN409_28925 PF00753 Metallo-beta-lactamase superfamily DN409_28925 PF13567 Domain of unknown function (DUF4131) DN409_28925 PF03772 Competence protein DN409_28955 PF10779 Haemolysin XhlA DN409_28980 PF02423 Ornithine cyclodeaminase/mu-crystallin family DN409_28995 PF00764 Arginosuccinate synthase DN409_29010 PF00668 Condensation domain DN409_29010 PF13193 AMP-binding enzyme C-terminal domain DN409_29010 PF00501 AMP-binding enzyme DN409_29010 PF00551 Formyl transferase DN409_29010 PF00550 Phosphopantetheine attachment site DN409_29015 PF01042 Endoribonuclease L-PSP DN409_29025 PF01648 4'-phosphopantetheinyl transferase superfamily DN409_29030 PF00550 Phosphopantetheine attachment site DN409_29035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_29035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_29035 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_29045 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN409_29045 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN409_29055 PF17755 UvrA DNA-binding domain DN409_29055 PF00005 ABC transporter DN409_29055 PF17760 UvrA interaction domain DN409_29060 PF17757 UvrB interaction domain DN409_29060 PF12344 Ultra-violet resistance protein B DN409_29060 PF02151 UvrB/uvrC motif DN409_29060 PF04851 Type III restriction enzyme, res subunit DN409_29060 PF00271 Helicase conserved C-terminal domain DN409_29065 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN409_29065 PF00056 lactate/malate dehydrogenase, NAD binding domain DN409_29070 PF13193 AMP-binding enzyme C-terminal domain DN409_29070 PF00501 AMP-binding enzyme DN409_29085 PF00155 Aminotransferase class I and II DN409_29140 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN409_29140 PF12002 MgsA AAA+ ATPase C terminal DN409_29140 PF01661 Macro domain DN409_29140 PF16193 AAA C-terminal domain DN409_29150 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN409_29150 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN409_29155 PF02770 Acyl-CoA dehydrogenase, middle domain DN409_29155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN409_29155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN409_29165 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DN409_29165 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DN409_29170 PF00578 AhpC/TSA family DN409_29180 PF02625 XdhC and CoxI family DN409_29180 PF13478 XdhC Rossmann domain DN409_29185 PF00111 2Fe-2S iron-sulfur cluster binding domain DN409_29185 PF01799 [2Fe-2S] binding domain DN409_29200 PF00107 Zinc-binding dehydrogenase DN409_29200 PF08240 Alcohol dehydrogenase GroES-like domain DN409_29200 PF13823 Alcohol dehydrogenase GroES-associated DN409_29210 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family DN409_29215 PF00483 Nucleotidyl transferase DN409_29220 PF00534 Glycosyl transferases group 1 DN409_29220 PF13439 Glycosyltransferase Family 4 DN409_29225 PF16363 GDP-mannose 4,6 dehydratase DN409_29230 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DN409_29230 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DN409_29230 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DN409_29245 PF00291 Pyridoxal-phosphate dependent enzyme DN409_29250 PF00291 Pyridoxal-phosphate dependent enzyme DN409_29255 PF00005 ABC transporter DN409_29270 PF13280 WYL domain DN409_29270 PF08279 HTH domain DN409_29295 PF13610 DDE domain DN409_29305 PF00216 Bacterial DNA-binding protein DN409_29310 PF18277 AbrB C-terminal domain DN409_29310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN409_29360 PF00072 Response regulator receiver domain DN409_29360 PF00196 Bacterial regulatory proteins, luxR family DN409_29370 PF00144 Beta-lactamase DN409_29375 PF07282 Putative transposase DNA-binding domain DN409_29375 PF01385 Probable transposase DN409_29375 PF12323 Helix-turn-helix domain DN409_29380 PF07690 Major Facilitator Superfamily DN409_29385 PF03466 LysR substrate binding domain DN409_29385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN409_29395 PF13610 DDE domain DN409_29440 PF01569 PAP2 superfamily DN409_29465 PF00553 Cellulose binding domain DN409_29465 PF00041 Fibronectin type III domain DN409_29465 PF00704 Glycosyl hydrolases family 18 DN409_29475 PF04607 Region found in RelA / SpoT proteins DN409_29480 PF07690 Major Facilitator Superfamily DN409_29485 PF08360 QacR-like protein, C-terminal region DN409_29485 PF00440 Bacterial regulatory proteins, tetR family DN409_29490 PF11954 Domain of unknown function (DUF3471) DN409_29490 PF00144 Beta-lactamase DN409_29500 PF02667 Short chain fatty acid transporter DN409_29550 PF00144 Beta-lactamase DN409_29555 PF00072 Response regulator receiver domain DN409_29555 PF00196 Bacterial regulatory proteins, luxR family DN409_29560 PF13610 DDE domain DN409_29570 PF18840 Large polyvalent protein associated domain 25 DN409_29605 PF00877 NlpC/P60 family DN409_29690 PF01381 Helix-turn-helix DN409_29720 PF00557 Metallopeptidase family M24 DN409_29790 PF13392 HNH endonuclease DN409_29810 PF01381 Helix-turn-helix DN409_29810 PF00145 C-5 cytosine-specific DNA methylase DN409_29855 PF10668 Phage terminase small subunit DN409_30015 PF14470 Bacterial PH domain DN409_30050 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system DN409_30110 PF02511 Thymidylate synthase complementing protein DN409_30255 PF17854 FtsK alpha domain DN409_30255 PF01580 FtsK/SpoIIIE family DN409_30255 PF09397 Ftsk gamma domain DN409_30290 PF01381 Helix-turn-helix DN409_30340 PF08708 Primase C terminal 1 (PriCT-1) DN409_30350 PF13610 DDE domain DN409_30385 PF04134 Protein of unknown function, DUF393 DN409_30395 PF10502 Signal peptidase, peptidase S26 DN409_30400 PF05547 Immune inhibitor A peptidase M6 DN409_30430 PF02899 Phage integrase, N-terminal SAM-like domain DN409_30430 PF00589 Phage integrase family DN409_30435 PF02796 Helix-turn-helix domain of resolvase DN409_30435 PF00239 Resolvase, N terminal domain DN409_30475 PF13610 DDE domain DN409_30490 PF13411 MerR HTH family regulatory protein DN409_30490 PF13152 Protein of unknown function (DUF3967) DN409_30500 PF13610 DDE domain DN409_30505 PF13152 Protein of unknown function (DUF3967) DN409_30505 PF13411 MerR HTH family regulatory protein DN409_30520 PF13614 AAA domain DN409_30540 PF01556 DnaJ C terminal domain DN409_30540 PF00684 DnaJ central domain DN409_30540 PF00226 DnaJ domain DN409_30560 PF00877 NlpC/P60 family DN409_30630 PF01580 FtsK/SpoIIIE family DN409_30650 PF07972 NrdI Flavodoxin like DN409_30685 PF14040 Deoxyribonuclease NucA/NucB DN409_30710 PF00589 Phage integrase family DN409_30735 PF12802 MarR family DN409_30760 PF03412 Peptidase C39 family DN409_30760 PF00005 ABC transporter DN409_30760 PF00664 ABC transporter transmembrane region DN409_30770 PF00589 Phage integrase family