locus-tag	class	description
J5V73_00005	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
J5V73_00010	COG0592	DNA-directed DNA polymerase activity
J5V73_00015	COG2501	S4 domain
J5V73_00020	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5V73_00025	COG0187	DNA topoisomerase II activity
J5V73_00030	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V73_00065	COG0516	GMP reductase activity
J5V73_00065	COG0517	IMP dehydrogenase activity
J5V73_00070	COG1686	Belongs to the peptidase S11 family
J5V73_00075	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
J5V73_00080	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
J5V73_00100	COG1428	Deoxynucleoside kinase
J5V73_00105	COG1428	Deoxynucleoside kinase
J5V73_00110	COG1335	isochorismatase
J5V73_00115	COG0590	tRNA wobble adenosine to inosine editing
J5V73_00125	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
J5V73_00130	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
J5V73_00135	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
J5V73_00180	COG1982	Orn Lys Arg decarboxylase major
J5V73_00185	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
J5V73_00190	COG0470	DNA polymerase III
J5V73_00195	COG1774	PSP1 C-terminal conserved region
J5V73_00200	COG4467	Involved in initiation control of chromosome replication
J5V73_00205	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
J5V73_00215	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
J5V73_00220	COG2002	toxin-antitoxin pair type II binding
J5V73_00230	COG0084	hydrolase, TatD family'
J5V73_00240	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
J5V73_00250	COG4466	Protein conserved in bacteria
J5V73_00260	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
J5V73_00265	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V73_00270	COG0251	oxidation-reduction process
J5V73_00275	COG2088	sporulation resulting in formation of a cellular spore
J5V73_00280	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
J5V73_00300	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
J5V73_00305	COG2002	toxin-antitoxin pair type II binding
J5V73_00310	COG2244	polysaccharide biosynthetic process
J5V73_00315	COG3956	TIGRFAM MazG family protein
J5V73_00320	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
J5V73_00340	COG1098	S1 RNA binding domain
J5V73_00355	COG2208	phosphoserine phosphatase activity
J5V73_00365	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V73_00370	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
J5V73_00375	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
J5V73_00380	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
J5V73_00385	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V73_00390	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
J5V73_00395	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V73_00400	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V73_00405	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
J5V73_00410	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
J5V73_00415	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
J5V73_00420	COG1396	sequence-specific DNA binding
J5V73_00425	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V73_00430	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
J5V73_00515	COG3880	PFAM UvrB UvrC protein
J5V73_00520	COG3869	Catalyzes the specific phosphorylation of arginine residues in
J5V73_00525	COG0542	response to heat
J5V73_00530	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
J5V73_00535	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
J5V73_00540	COG4956	integral membrane protein (PIN domain superfamily)
J5V73_00545	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
J5V73_00555	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
J5V73_00560	COG1045	serine acetyltransferase
J5V73_00565	COG0215	cysteine-tRNA ligase activity
J5V73_00575	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V73_00580	COG3688	RNA-binding protein containing a PIN domain
J5V73_00590	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V73_00595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V73_00600	COG0250	Participates in transcription elongation, termination and antitermination
J5V73_00605	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
J5V73_00610	COG0081	regulation of translation
J5V73_00615	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
J5V73_00620	COG0222	ribosome binding
J5V73_00625	COG2813	Specifically methylates the guanine in position
J5V73_00630	COG0085	RNA polymerase activity
J5V73_00635	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
J5V73_00640	COG1358	cellular component organization or biogenesis
J5V73_00645	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
J5V73_00655	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
J5V73_00660	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
J5V73_00665	COG0051	transcription antitermination factor activity, RNA binding
J5V73_00670	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
J5V73_00675	COG0088	Forms part of the polypeptide exit tunnel
J5V73_00680	COG0089	rRNA binding
J5V73_00685	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
J5V73_00690	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
J5V73_00695	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
J5V73_00710	COG0255	Belongs to the universal ribosomal protein uL29 family
J5V73_00715	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
J5V73_00725	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
J5V73_00730	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
J5V73_00740	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
J5V73_00750	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
J5V73_00760	COG1841	ribosomal large subunit assembly
J5V73_00765	COG0200	Binds to the 23S rRNA
J5V73_00770	COG0201	protein transport
J5V73_00775	COG0563	adenylate kinase activity
J5V73_00780	COG0024	Methionine aminopeptidase
J5V73_00790	COG0257	Belongs to the bacterial ribosomal protein bL36 family
J5V73_00795	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
J5V73_00800	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
J5V73_00825	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
J5V73_00835	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
J5V73_00840	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
J5V73_00850	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_00855	COG0489	protein tyrosine kinase activity
J5V73_00865	COG2194	sulfuric ester hydrolase activity
J5V73_00870	COG0726	polysaccharide deacetylase
J5V73_00950	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
J5V73_00955	COG4856	YbbR-like protein
J5V73_00960	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V73_00975	COG1506	peptidase
J5V73_00975	COG0823	Involved in the tonB-independent uptake of proteins
J5V73_00975	COG4946	Tricorn protease homolog
J5V73_00985	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_00990	COG2011	ABC-type metal ion transport system permease component
J5V73_01000	COG1464	Belongs to the NlpA lipoprotein family
J5V73_01005	COG0604	alcohol dehydrogenase
J5V73_01015	COG0277	FAD linked oxidase domain protein
J5V73_01020	COG2271	Major facilitator Superfamily
J5V73_01030	COG2814	Major facilitator Superfamily
J5V73_01050	COG0601	transmembrane transport
J5V73_01055	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V73_01060	COG0444	Belongs to the ABC transporter superfamily
J5V73_01065	COG4608	Belongs to the ABC transporter superfamily
J5V73_01070	COG4166	transmembrane transport
J5V73_01080	COG2207	Transcriptional regulator
J5V73_01095	COG4166	transmembrane transport
J5V73_01100	COG4166	transmembrane transport
J5V73_01105	COG0656	L-ascorbic acid biosynthetic process
J5V73_01110	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V73_01120	COG4149	molybdate abc transporter
J5V73_01125	COG0725	ABC transporter, periplasmic molybdate-binding protein
J5V73_01130	COG1910	domain protein
J5V73_01145	COG0697	spore germination
J5V73_01160	COG0204	Acyl-transferase
J5V73_01170	COG1609	Transcriptional regulator
J5V73_01180	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_01195	COG5298	Protein conserved in bacteria
J5V73_01215	COG0488	(ABC) transporter
J5V73_01220	COG4585	Histidine kinase
J5V73_01225	COG2197	response regulator
J5V73_01230	COG1131	(ABC) transporter
J5V73_01235	COG1511	domain protein
J5V73_01235	COG0842	Transport permease protein
J5V73_01240	COG0842	Transport permease protein
J5V73_01250	COG0747	negative chemotaxis
J5V73_01260	COG0601	transmembrane transport
J5V73_01265	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V73_01270	COG0444	Belongs to the ABC transporter superfamily
J5V73_01275	COG4608	Belongs to the ABC transporter superfamily
J5V73_01280	COG0561	phosphatase activity
J5V73_01310	COG3185	4-Hydroxyphenylpyruvate dioxygenase
J5V73_01315	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V73_01325	COG2814	Major facilitator Superfamily
J5V73_01335	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
J5V73_01345	COG4294	response to UV
J5V73_01350	COG0705	Rhomboid family
J5V73_01355	COG0736	holo-[acyl-carrier-protein] synthase activity
J5V73_01360	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
J5V73_01370	COG0864	Transcriptional regulator
J5V73_01375	COG2337	Toxic component of a toxin-antitoxin (TA) module
J5V73_01380	COG2183	response to ionizing radiation
J5V73_01480	COG0802	atpase or kinase
J5V73_01485	COG1214	PFAM Peptidase M22, glycoprotease
J5V73_01490	COG0456	acetyltransferase
J5V73_01500	COG0488	(ABC) transporter
J5V73_01505	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
J5V73_01515	COG1266	CAAX protease self-immunity
J5V73_01520	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
J5V73_01525	COG0459	protein refolding
J5V73_01530	COG0518	GMP synthase (glutamine-hydrolyzing) activity
J5V73_01530	COG0519	Catalyzes the synthesis of GMP from XMP
J5V73_01535	COG2252	PERMEase
J5V73_01545	COG5002	protein histidine kinase activity
J5V73_01570	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5V73_01600	COG2226	methyltransferase
J5V73_01610	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V73_01620	COG1215	transferase activity, transferring glycosyl groups
J5V73_01660	COG2205	protein histidine kinase activity
J5V73_01665	COG0745	RESPONSE REGULATOR receiver
J5V73_01685	COG0697	spore germination
J5V73_01710	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
J5V73_01715	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
J5V73_01720	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
J5V73_01725	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
J5V73_01730	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V73_01735	COG0047	phosphoribosylformylglycinamidine synthase activity
J5V73_01740	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
J5V73_01745	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
J5V73_01750	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
J5V73_01755	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
J5V73_01760	COG0138	bifunctional purine biosynthesis protein purh
J5V73_01765	COG0151	Belongs to the GarS family
J5V73_01785	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
J5V73_01790	COG0210	DNA helicase
J5V73_01795	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
J5V73_01800	COG4851	CamS sex pheromone cAM373 precursor
J5V73_01810	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_01815	COG1335	isochorismatase
J5V73_01825	COG2011	ABC-type metal ion transport system permease component
J5V73_01830	COG1464	Belongs to the NlpA lipoprotein family
J5V73_01845	COG0003	Pfam Anion-transporting ATPase
J5V73_01850	COG1846	Transcriptional regulator
J5V73_01855	COG4682	membrane
J5V73_01865	COG0154	amidase activity
J5V73_01870	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
J5V73_01875	COG1597	lipid kinase activity
J5V73_01880	COG0546	phosphoglycolate phosphatase activity
J5V73_01885	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V73_01895	COG0531	amino acid
J5V73_01900	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_01905	COG2076	Multidrug Resistance protein
J5V73_01910	COG2309	aminopeptidase activity
J5V73_01925	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_01935	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
J5V73_01940	COG5002	protein histidine kinase activity
J5V73_01945	COG4807	Protein conserved in bacteria
J5V73_01970	COG1757	Na H antiporter
J5V73_01975	COG1473	amidohydrolase
J5V73_01990	COG0450	alkyl hydroperoxide reductase
J5V73_02000	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V73_02010	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_02015	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_02020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_02025	COG0492	ferredoxin-NADP+ reductase activity
J5V73_02035	COG0166	Belongs to the GPI family
J5V73_02060	COG5002	protein histidine kinase activity
J5V73_02080	COG3541	Predicted nucleotidyltransferase
J5V73_02085	COG2814	Major facilitator Superfamily
J5V73_02090	COG0723	plastoquinol--plastocyanin reductase activity
J5V73_02090	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V73_02100	COG0765	amino acid transport
J5V73_02105	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_02115	COG0840	transmembrane signaling receptor activity
J5V73_02140	COG0549	Belongs to the carbamate kinase family
J5V73_02155	COG0277	FAD linked oxidase domain protein
J5V73_02160	COG0366	Alpha amylase catalytic
J5V73_02165	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V73_02165	COG2190	(PTS) system
J5V73_02165	COG1263	PTS System
J5V73_02185	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
J5V73_02190	COG0352	thiamine-phosphate diphosphorylase activity
J5V73_02195	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J5V73_02200	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
J5V73_02215	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V73_02220	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V73_02225	COG1116	anion transmembrane transporter activity
J5V73_02230	COG0488	(ABC) transporter
J5V73_02275	COG2270	Major facilitator Superfamily
J5V73_02305	COG2310	stress, protein
J5V73_02310	COG2310	stress, protein
J5V73_02315	COG2310	stress, protein
J5V73_02320	COG0861	Integral membrane protein TerC family
J5V73_02330	COG3853	Toxic anion resistance protein (TelA)
J5V73_02340	COG4840	Belongs to the UPF0435 family
J5V73_02345	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
J5V73_02355	COG1295	ribonuclease BN
J5V73_02360	COG2217	Heavy metal translocating P-type atpase
J5V73_02365	COG0697	spore germination
J5V73_02385	COG0586	Pfam SNARE associated Golgi protein
J5V73_02400	COG3871	stress protein (general stress protein 26)
J5V73_02405	COG0387	Pfam Sodium calcium exchanger
J5V73_02415	COG0535	radical SAM domain protein
J5V73_02435	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V73_02455	COG3829	transcription factor binding
J5V73_02465	COG0833	amino acid
J5V73_02470	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V73_02490	COG2066	Belongs to the glutaminase family
J5V73_02495	COG1263	PTS System
J5V73_02495	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V73_02500	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_02515	COG1216	Glycosyl transferase, family 2
J5V73_02525	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V73_02525	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V73_02530	COG0463	Glycosyl transferase, family 2
J5V73_02545	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
J5V73_02550	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
J5V73_02565	COG1228	amidohydrolase
J5V73_02570	COG1090	epimerase
J5V73_02575	COG2137	regulation of response to DNA damage stimulus
J5V73_02600	COG1988	membrane-bound metal-dependent
J5V73_02605	COG1194	a g-specific adenine glycosylase
J5V73_02625	COG3557	Belongs to the UPF0374 family
J5V73_02630	COG1132	(ABC) transporter
J5V73_02635	COG4129	membrane
J5V73_02640	COG0070	glutamate synthase
J5V73_02640	COG0069	glutamate synthase activity
J5V73_02640	COG0067	glutamate synthase
J5V73_02645	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V73_02650	COG4555	ABC transporter
J5V73_02670	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
J5V73_02675	COG0735	belongs to the Fur family
J5V73_02795	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
J5V73_02800	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
J5V73_02820	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
J5V73_02825	COG1716	ATPase activity
J5V73_02825	COG5001	Diguanylate cyclase
J5V73_02830	COG2766	serine protein kinase
J5V73_02835	COG2718	Belongs to the UPF0229 family
J5V73_02850	COG1585	Membrane protein implicated in regulation of membrane protease activity
J5V73_02855	COG2268	Band 7 protein
J5V73_02865	COG3290	protein histidine kinase activity
J5V73_02870	COG4565	transcriptional regulatory protein
J5V73_02875	COG2851	Citrate transporter
J5V73_02900	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V73_02905	COG3842	ATPase activity
J5V73_02910	COG1175	transmembrane transport
J5V73_02915	COG0395	ABC-type sugar transport system, permease component
J5V73_02925	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V73_02930	COG0745	RESPONSE REGULATOR receiver
J5V73_02935	COG5002	protein histidine kinase activity
J5V73_02945	COG4990	cell redox homeostasis
J5V73_02955	COG3290	protein histidine kinase activity
J5V73_02960	COG4565	transcriptional regulatory protein
J5V73_02965	COG3493	citrate carrier protein
J5V73_02970	COG0281	malic enzyme
J5V73_02980	COG0697	spore germination
J5V73_02985	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_02995	COG5002	protein histidine kinase activity
J5V73_03000	COG0745	RESPONSE REGULATOR receiver
J5V73_03005	COG0456	acetyltransferase
J5V73_03010	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V73_03015	COG3383	formate dehydrogenase (NAD+) activity
J5V73_03020	COG2427	Protein of unknown function (DUF1641)
J5V73_03035	COG0531	amino acid
J5V73_03045	COG0640	Transcriptional regulator
J5V73_03055	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
J5V73_03070	COG3227	Zinc metalloprotease (Elastase)
J5V73_03090	COG2720	vancomycin resistance protein
J5V73_03095	COG1316	TRANSCRIPTIONal
J5V73_03100	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_03105	COG0346	lactoylglutathione lyase activity
J5V73_03110	COG1253	flavin adenine dinucleotide binding
J5V73_03115	COG1027	Aspartate ammonia-lyase
J5V73_03120	COG1620	l-lactate permease
J5V73_03125	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_03140	COG3104	oligopeptide transport
J5V73_03145	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_03150	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_03155	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_03165	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V73_03170	COG0156	8-amino-7-oxononanoate synthase activity
J5V73_03175	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
J5V73_03185	COG4548	von Willebrand factor, type A
J5V73_03190	COG0714	Associated with various cellular activities
J5V73_03210	COG0531	amino acid
J5V73_03215	COG2188	Transcriptional regulator
J5V73_03220	COG1263	PTS System
J5V73_03220	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V73_03225	COG0366	Alpha amylase catalytic
J5V73_03240	COG0697	spore germination
J5V73_03245	COG4585	Histidine kinase
J5V73_03255	COG1404	Belongs to the peptidase S8 family
J5V73_03270	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V73_03275	COG1115	amino acid carrier protein
J5V73_03280	COG1126	abc transporter atp-binding protein
J5V73_03285	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_03290	COG0765	amino acid transport
J5V73_03295	COG0765	amino acid transport
J5V73_03300	COG0833	amino acid
J5V73_03330	COG2378	regulation of single-species biofilm formation
J5V73_03335	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
J5V73_03340	COG5002	protein histidine kinase activity
J5V73_03355	COG0659	secondary active sulfate transmembrane transporter activity
J5V73_03370	COG2271	Major facilitator Superfamily
J5V73_03375	COG1846	Transcriptional regulator
J5V73_03380	COG0477	Major facilitator Superfamily
J5V73_03385	COG1609	Transcriptional regulator
J5V73_03390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
J5V73_03395	COG1869	D-ribose catabolic process
J5V73_03405	COG1172	Belongs to the binding-protein-dependent transport system permease family
J5V73_03410	COG1879	ABC-type sugar transport system periplasmic component
J5V73_03440	COG1063	alcohol dehydrogenase
J5V73_03485	COG0840	transmembrane signaling receptor activity
J5V73_03490	COG3584	3D domain protein
J5V73_03490	COG3583	domain protein
J5V73_03495	COG1476	TRANSCRIPTIONal
J5V73_03515	COG3104	oligopeptide transport
J5V73_03520	COG1114	Component of the transport system for branched-chain amino acids
J5V73_03535	COG1113	amino acid transport
J5V73_03540	COG2252	PERMEase
J5V73_03555	COG2153	protein acetylation
J5V73_03565	COG0475	glutathione-regulated potassium exporter activity
J5V73_03565	COG0569	domain protein
J5V73_03575	COG1845	cytochrome c oxidase, subunit III
J5V73_03580	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
J5V73_03590	COG4990	cell redox homeostasis
J5V73_03605	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V73_03610	COG0697	spore germination
J5V73_03615	COG0531	amino acid
J5V73_03625	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V73_03630	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
J5V73_03640	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V73_03645	COG0573	inorganic phosphate transmembrane transporter activity
J5V73_03650	COG0581	inorganic phosphate transmembrane transporter activity
J5V73_03655	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V73_03775	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
J5V73_03790	COG3103	Sh3 type 3 domain protein
J5V73_03790	COG4991	sh3 domain protein
J5V73_03790	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_03795	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V73_03800	COG1116	anion transmembrane transporter activity
J5V73_03805	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V73_03810	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V73_03815	COG0352	thiamine-phosphate diphosphorylase activity
J5V73_03820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V73_03825	COG2104	thiamine diphosphate biosynthetic process
J5V73_03835	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V73_03840	COG0351	phosphomethylpyrimidine kinase
J5V73_03870	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
J5V73_03875	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
J5V73_03880	COG2205	protein histidine kinase activity
J5V73_03885	COG2814	Major facilitator Superfamily
J5V73_03890	COG1846	Transcriptional regulator
J5V73_03900	COG2252	PERMEase
J5V73_03905	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_03930	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
J5V73_03965	COG0778	Nitroreductase
J5V73_03970	COG2719	SpoVR family
J5V73_04005	COG1937	Protein conserved in bacteria
J5V73_04010	COG0425	Belongs to the sulfur carrier protein TusA family
J5V73_04010	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V73_04015	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V73_04015	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_04020	COG0425	Belongs to the sulfur carrier protein TusA family
J5V73_04025	COG0425	Belongs to the sulfur carrier protein TusA family
J5V73_04025	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V73_04030	COG2210	Belongs to the sulfur carrier protein TusA family
J5V73_04035	COG0730	response to heat
J5V73_04045	COG1316	TRANSCRIPTIONal
J5V73_04050	COG0604	alcohol dehydrogenase
J5V73_04055	COG1283	sodium-dependent phosphate transmembrane transporter activity
J5V73_04065	COG2814	Major facilitator Superfamily
J5V73_04075	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V73_04075	COG3711	transcriptional antiterminator
J5V73_04080	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V73_04085	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_04110	COG1388	LysM domain
J5V73_04110	COG3584	3D domain protein
J5V73_04115	COG0577	efflux transmembrane transporter activity
J5V73_04120	COG1136	(ABC) transporter
J5V73_04130	COG5522	Integral membrane protein (intg_mem_TP0381)
J5V73_04145	COG1114	Component of the transport system for branched-chain amino acids
J5V73_04150	COG3546	catalase activity
J5V73_04180	COG0586	Pfam SNARE associated Golgi protein
J5V73_04215	COG0531	amino acid
J5V73_04220	COG0475	glutathione-regulated potassium exporter activity
J5V73_04230	COG1737	Transcriptional regulator
J5V73_04235	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
J5V73_04240	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V73_04240	COG1263	PTS System
J5V73_04250	COG2259	Doxx family
J5V73_04275	COG1522	sequence-specific DNA binding
J5V73_04300	COG2076	Multidrug Resistance protein
J5V73_04305	COG1309	transcriptional regulator
J5V73_04310	COG2814	Major facilitator Superfamily
J5V73_04315	COG1733	regulation of RNA biosynthetic process
J5V73_04325	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V73_04335	COG4533	DNA binding
J5V73_04340	COG2211	Major facilitator Superfamily
J5V73_04350	COG0693	protein deglycase activity
J5V73_04360	COG0531	amino acid
J5V73_04365	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_04370	COG1132	(ABC) transporter
J5V73_04375	COG1132	(ABC) transporter
J5V73_04380	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_04385	COG0765	amino acid transport
J5V73_04390	COG1126	abc transporter atp-binding protein
J5V73_04405	COG0189	ligase activity
J5V73_04415	COG4399	Belongs to the UPF0754 family
J5V73_04420	COG3679	Belongs to the UPF0342 family
J5V73_04435	COG0028	Belongs to the TPP enzyme family
J5V73_04440	COG3527	Alpha-acetolactate decarboxylase
J5V73_04445	COG0463	Glycosyl transferase, family 2
J5V73_04450	COG1216	Glycosyl transferase, family 2
J5V73_04455	COG2094	Belongs to the DNA glycosylase MPG family
J5V73_04460	COG0561	phosphatase activity
J5V73_04465	COG5632	N-Acetylmuramoyl-L-alanine amidase
J5V73_04465	COG3409	Peptidoglycan-binding domain 1 protein
J5V73_04470	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V73_04475	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_04495	COG0586	Pfam SNARE associated Golgi protein
J5V73_04505	COG4978	Transcriptional regulator
J5V73_04505	COG0789	Transcriptional regulator
J5V73_04515	COG0659	secondary active sulfate transmembrane transporter activity
J5V73_04535	COG2244	polysaccharide biosynthetic process
J5V73_04545	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_04550	COG4196	transglutaminase domain protein
J5V73_04565	COG1696	Membrane protein involved in D-alanine export
J5V73_04580	COG1024	Enoyl-CoA hydratase
J5V73_04595	COG1363	Peptidase, m42
J5V73_04615	COG1113	amino acid transport
J5V73_04620	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
J5V73_04640	COG0579	oxidoreductase
J5V73_04675	COG0601	transmembrane transport
J5V73_04680	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V73_04685	COG0444	Belongs to the ABC transporter superfamily
J5V73_04690	COG4608	Belongs to the ABC transporter superfamily
J5V73_04780	COG0477	Major facilitator Superfamily
J5V73_04785	COG3290	protein histidine kinase activity
J5V73_04790	COG4565	transcriptional regulatory protein
J5V73_04795	COG3181	Tripartite tricarboxylate transporter family receptor
J5V73_04875	COG0305	Participates in initiation and elongation during chromosome replication
J5V73_04910	COG0477	Major facilitator Superfamily
J5V73_04985	COG2732	(Barnase) inhibitor
J5V73_04990	COG2814	Major facilitator Superfamily
J5V73_04995	COG0640	Transcriptional regulator
J5V73_05010	COG1183	phosphatidylcholine synthase activity
J5V73_05030	COG2376	Dihydroxyacetone kinase
J5V73_05040	COG2376	Dihydroxyacetone kinase
J5V73_05115	COG5444	nuclease activity
J5V73_05135	COG1335	isochorismatase
J5V73_05170	COG0076	glutamate decarboxylase activity
J5V73_05185	COG1278	Cold shock
J5V73_05210	COG3237	CsbD-like
J5V73_05230	COG2172	sigma factor antagonist activity
J5V73_05235	COG1191	sigma factor activity
J5V73_05245	COG2208	phosphoserine phosphatase activity
J5V73_05250	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V73_05255	COG0784	Response regulator, receiver
J5V73_05255	COG2205	protein histidine kinase activity
J5V73_05295	COG4585	Histidine kinase
J5V73_05300	COG2197	response regulator
J5V73_05330	COG0420	3'-5' exonuclease activity
J5V73_05335	COG4717	serine-type aminopeptidase activity
J5V73_05340	COG3481	metal-dependent phosphohydrolase, HD sub domain
J5V73_05350	COG0346	lactoylglutathione lyase activity
J5V73_05355	COG0346	lactoylglutathione lyase activity
J5V73_05360	COG0457	Tetratricopeptide repeat
J5V73_05370	COG2267	carboxylic ester hydrolase activity
J5V73_05385	COG3620	sequence-specific DNA binding
J5V73_05390	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
J5V73_05395	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
J5V73_05400	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
J5V73_05405	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
J5V73_05410	COG1595	DNA-templated transcription, initiation
J5V73_05425	COG3973	AAA domain
J5V73_05445	COG1846	Transcriptional regulator
J5V73_05455	COG0537	adenosine 5'-monophosphoramidase activity
J5V73_05460	COG1131	(ABC) transporter
J5V73_05465	COG4473	ABC transporter
J5V73_05475	COG0247	lactate metabolic process
J5V73_05480	COG1139	Iron-sulfur cluster binding protein
J5V73_05485	COG1556	Lactate utilization protein
J5V73_05505	COG3402	PFAM membrane-flanked domain
J5V73_05510	COG3428	Bacterial PH domain
J5V73_05540	COG3402	PFAM membrane-flanked domain
J5V73_05545	COG3428	Bacterial PH domain
J5V73_05550	COG2329	Antibiotic biosynthesis monooxygenase
J5V73_05555	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V73_05560	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
J5V73_05565	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
J5V73_05570	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V73_05605	COG1309	transcriptional regulator
J5V73_05610	COG1511	domain protein
J5V73_05610	COG1511	domain protein
J5V73_05650	COG2378	regulation of single-species biofilm formation
J5V73_05655	COG1609	Transcriptional regulator
J5V73_05665	COG1234	tRNA 3'-trailer cleavage
J5V73_05670	COG0095	Lipoate-protein ligase
J5V73_05680	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_05695	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
J5V73_05705	COG4208	sulfate ABC transporter
J5V73_05750	COG1408	metallophosphoesterase
J5V73_05755	COG1078	dGTPase activity
J5V73_05760	COG1129	ABC transporter
J5V73_05785	COG1595	DNA-templated transcription, initiation
J5V73_05790	COG2207	Transcriptional regulator
J5V73_05790	COG3708	Transcriptional regulator
J5V73_05795	COG2205	protein histidine kinase activity
J5V73_05800	COG0745	RESPONSE REGULATOR receiver
J5V73_05820	COG0501	Belongs to the peptidase M48B family
J5V73_05825	COG0697	spore germination
J5V73_05850	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
J5V73_05855	COG2224	Isocitrate lyase
J5V73_05865	COG1278	Cold shock
J5V73_05875	COG4903	ComK protein
J5V73_05885	COG0398	Pfam SNARE associated Golgi protein
J5V73_05895	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
J5V73_05900	COG1074	ATP-dependent DNA helicase activity
J5V73_05955	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V73_05980	COG0367	asparagine synthase
J5V73_05995	COG0753	catalase activity
J5V73_06000	COG0004	ammonium transporteR
J5V73_06015	COG1666	GTP binding
J5V73_06020	COG2996	Protein conserved in bacteria
J5V73_06035	COG1329	Transcriptional regulator
J5V73_06065	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V73_06075	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_06090	COG0561	phosphatase activity
J5V73_06110	COG2267	carboxylic ester hydrolase activity
J5V73_06125	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V73_06130	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
J5V73_06135	COG5504	Zn-dependent protease
J5V73_06145	COG0180	Tryptophanyl-tRNA synthetase
J5V73_06155	COG4166	transmembrane transport
J5V73_06160	COG0601	transmembrane transport
J5V73_06165	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
J5V73_06170	COG0444	Belongs to the ABC transporter superfamily
J5V73_06175	COG4608	Belongs to the ABC transporter superfamily
J5V73_06180	COG0534	Mate efflux family protein
J5V73_06185	COG4166	transmembrane transport
J5V73_06200	COG0861	Integral membrane protein TerC family
J5V73_06205	COG4862	establishment of competence for transformation
J5V73_06210	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V73_06220	COG1164	Oligoendopeptidase f
J5V73_06235	COG2346	COG2346, Truncated hemoglobins
J5V73_06240	COG4116	CYTH
J5V73_06250	COG2357	RelA SpoT domain protein
J5V73_06260	COG0564	pseudouridine synthase activity
J5V73_06270	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
J5V73_06275	COG0772	Belongs to the SEDS family
J5V73_06280	COG1216	Glycosyl transferase, family 2
J5V73_06300	COG0457	Tetratricopeptide repeat
J5V73_06300	COG0463	Glycosyl transferase, family 2
J5V73_06320	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
J5V73_06335	COG1091	dTDP-4-dehydrorhamnose reductase activity
J5V73_06380	COG2153	protein acetylation
J5V73_06385	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J5V73_06390	COG2382	esterase
J5V73_06415	COG5492	domain, Protein
J5V73_06420	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V73_06430	COG0512	Glutamine amidotransferase of anthranilate synthase
J5V73_06430	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V73_06435	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
J5V73_06440	COG0134	indole-3-glycerol-phosphate synthase activity
J5V73_06445	COG0135	phosphoribosylanthranilate isomerase activity
J5V73_06450	COG0133	tryptophan synthase activity
J5V73_06455	COG0159	tryptophan synthase activity
J5V73_06465	COG1620	l-lactate permease
J5V73_06470	COG5634	Uncharacterized conserved protein (DUF2278)
J5V73_06525	COG2226	methyltransferase
J5V73_06545	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V73_06550	COG0567	Dehydrogenase, E1 component
J5V73_06555	COG1476	TRANSCRIPTIONal
J5V73_06600	COG1686	Belongs to the peptidase S11 family
J5V73_06605	COG0681	Belongs to the peptidase S26 family
J5V73_06640	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_06650	COG1176	ABC-type spermidine putrescine transport system, permease component I
J5V73_06655	COG1177	transmembrane transport
J5V73_06660	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
J5V73_06670	COG2409	Drug exporters of the RND superfamily
J5V73_06680	COG0564	pseudouridine synthase activity
J5V73_06690	COG2340	Cysteine-rich secretory protein family
J5V73_06695	COG0247	lactate metabolic process
J5V73_06700	COG0277	FAD linked oxidase domain protein
J5V73_06705	COG3835	regulator
J5V73_06715	COG0745	RESPONSE REGULATOR receiver
J5V73_06720	COG3850	Histidine kinase
J5V73_06720	COG5002	protein histidine kinase activity
J5V73_06725	COG2186	Transcriptional regulator
J5V73_06730	COG0247	lactate metabolic process
J5V73_06735	COG1139	Iron-sulfur cluster binding protein
J5V73_06740	COG1556	Lactate utilization protein
J5V73_06745	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
J5V73_06755	COG2116	formate transmembrane transporter activity
J5V73_06760	COG0861	Integral membrane protein TerC family
J5V73_06765	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V73_06775	COG2030	dehydratase
J5V73_06795	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_06800	COG3243	poly(R)-hydroxyalkanoic acid synthase
J5V73_06810	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V73_06825	COG1840	ABC-type Fe3 transport system, periplasmic component
J5V73_06830	COG3842	ATPase activity
J5V73_06840	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V73_06845	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J5V73_06855	COG1349	DNA-binding transcription factor activity
J5V73_06865	COG0235	Class ii aldolase
J5V73_06875	COG2861	carbohydrate metabolic process
J5V73_06885	COG3852	Histidine kinase
J5V73_06890	COG1846	Transcriptional regulator
J5V73_06900	COG2318	DinB family
J5V73_06905	COG5002	protein histidine kinase activity
J5V73_06910	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
J5V73_06915	COG0720	synthase
J5V73_06925	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
J5V73_06930	COG4873	Protein conserved in bacteria
J5V73_06945	COG0456	acetyltransferase
J5V73_06960	COG1780	Probably involved in ribonucleotide reductase function
J5V73_06975	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
J5V73_06980	COG0531	amino acid
J5V73_06995	COG2204	response regulator
J5V73_07000	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_07010	COG1725	Transcriptional regulator
J5V73_07015	COG1131	(ABC) transporter
J5V73_07025	COG1131	(ABC) transporter
J5V73_07030	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V73_07035	COG1266	CAAX protease self-immunity
J5V73_07045	COG1522	sequence-specific DNA binding
J5V73_07055	COG1335	isochorismatase
J5V73_07065	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V73_07070	COG2070	2-Nitropropane dioxygenase
J5V73_07075	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V73_07080	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V73_07085	COG1696	Membrane protein involved in D-alanine export
J5V73_07090	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5V73_07110	COG0716	FMN binding
J5V73_07145	COG0534	Mate efflux family protein
J5V73_07150	COG1968	undecaprenyl-diphosphatase activity
J5V73_07170	COG1846	Transcriptional regulator
J5V73_07185	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
J5V73_07195	COG3874	Sporulation protein YtfJ
J5V73_07220	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V73_07225	COG0028	Belongs to the TPP enzyme family
J5V73_07230	COG0440	acetolactate synthase activity
J5V73_07240	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V73_07250	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
J5V73_07260	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
J5V73_07265	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
J5V73_07275	COG0131	Imidazoleglycerol-phosphate dehydratase
J5V73_07280	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
J5V73_07285	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
J5V73_07290	COG0107	imidazoleglycerol-phosphate synthase activity
J5V73_07300	COG0140	phosphoribosyl-ATP diphosphatase activity
J5V73_07305	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V73_07320	COG1183	phosphatidylcholine synthase activity
J5V73_07325	COG1368	sulfuric ester hydrolase activity
J5V73_07335	COG0019	diaminopimelate decarboxylase activity
J5V73_07345	COG0175	sulfate reduction
J5V73_07350	COG2046	Belongs to the sulfate adenylyltransferase family
J5V73_07355	COG0529	Catalyzes the synthesis of activated sulfate
J5V73_07360	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J5V73_07380	COG1648	precorrin-2 dehydrogenase activity
J5V73_07385	COG0733	neurotransmitter:sodium symporter activity
J5V73_07410	COG1757	Na H antiporter
J5V73_07430	COG4758	membrane
J5V73_07435	COG4585	Histidine kinase
J5V73_07440	COG2197	response regulator
J5V73_07450	COG1114	Component of the transport system for branched-chain amino acids
J5V73_07460	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V73_07500	COG0730	response to heat
J5V73_07505	COG0306	phosphate transporter
J5V73_07510	COG1392	Phosphate transport regulator
J5V73_07515	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V73_07530	COG3852	Histidine kinase
J5V73_07535	COG1801	Protein of unknown function DUF72
J5V73_07545	COG0582	viral genome integration into host DNA
J5V73_07550	COG5002	protein histidine kinase activity
J5V73_07565	COG0392	lysyltransferase activity
J5V73_07565	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
J5V73_07580	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V73_07585	COG1686	Belongs to the peptidase S11 family
J5V73_07590	COG2715	membrane protein required for spore maturation
J5V73_07595	COG0700	Nucleoside recognition
J5V73_07600	COG1187	pseudouridine synthase activity
J5V73_07610	COG1333	cytochrome c biogenesis protein
J5V73_07615	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V73_07620	COG0745	RESPONSE REGULATOR receiver
J5V73_07625	COG5002	protein histidine kinase activity
J5V73_07630	COG2096	Adenosyltransferase
J5V73_07635	COG4942	peptidase
J5V73_07645	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
J5V73_07650	COG1141	Ferredoxin
J5V73_07655	COG4955	Helix-turn-helix domain
J5V73_07660	COG0514	ATP-dependent DNA helicase (RecQ)
J5V73_07665	COG1266	CAAX protease self-immunity
J5V73_07675	COG1408	metallophosphoesterase
J5V73_07690	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
J5V73_07710	COG0492	ferredoxin-NADP+ reductase activity
J5V73_07715	COG0252	asparaginase activity
J5V73_07725	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
J5V73_07735	COG1304	FMN binding
J5V73_07765	COG1160	GTP binding
J5V73_07770	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
J5V73_07790	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V73_07800	COG0302	gtp cyclohydrolase
J5V73_07805	COG0142	geranyltranstransferase activity
J5V73_07810	COG2226	methyltransferase
J5V73_07815	COG0142	geranyltranstransferase activity
J5V73_07830	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
J5V73_07840	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
J5V73_07845	COG0457	Tetratricopeptide repeat
J5V73_07850	COG5582	Belongs to the UPF0302 family
J5V73_07865	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
J5V73_07880	COG4347	Protein of unknown function (DUF1405)
J5V73_07895	COG2738	Putative neutral zinc metallopeptidase
J5V73_07905	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_07910	COG1694	Mazg nucleotide pyrophosphohydrolase
J5V73_07915	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
J5V73_07920	COG1803	Methylglyoxal synthase
J5V73_07925	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V73_07930	COG0438	transferase activity, transferring glycosyl groups
J5V73_07935	COG0617	tRNA 3'-terminal CCA addition
J5V73_07945	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
J5V73_07950	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
J5V73_07960	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
J5V73_07960	COG1199	ATP-dependent helicase activity
J5V73_07980	COG3935	DnaD domain protein
J5V73_07985	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
J5V73_07995	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V73_07995	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V73_08000	COG3331	DNA recombination
J5V73_08035	COG4474	Belongs to the UPF0398 family
J5V73_08040	COG3599	regulation of cell shape
J5V73_08050	COG0116	Belongs to the methyltransferase superfamily
J5V73_08060	COG1199	ATP-dependent helicase activity
J5V73_08065	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
J5V73_08075	COG0024	Methionine aminopeptidase
J5V73_08080	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V73_08085	COG2233	PERMEase
J5V73_08090	COG2311	Membrane
J5V73_08100	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V73_08110	COG0456	acetyltransferase
J5V73_08120	COG2897	thiosulfate sulfurtransferase activity
J5V73_08160	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V73_08175	COG0454	-acetyltransferase
J5V73_08195	COG0328	RNA-DNA hybrid ribonuclease activity
J5V73_08230	COG3403	YqcI/YcgG family
J5V73_08235	COG1280	lysine exporter protein (LysE YggA)
J5V73_08250	COG3162	membrane
J5V73_08255	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V73_08260	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V73_08270	COG0475	glutathione-regulated potassium exporter activity
J5V73_08275	COG0789	Transcriptional regulator
J5V73_08275	COG4978	Transcriptional regulator
J5V73_08285	COG2323	membrane
J5V73_08290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
J5V73_08325	COG2814	Major facilitator Superfamily
J5V73_08345	COG1923	regulation of RNA biosynthetic process
J5V73_08355	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V73_08360	COG1360	Flagellar Motor Protein
J5V73_08365	COG2201	protein-glutamate methylesterase activity
J5V73_08370	COG0643	Histidine kinase
J5V73_08370	COG2198	Histidine kinase
J5V73_08375	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V73_08375	COG1776	CheC inhibitor of MCP methylation
J5V73_08390	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
J5V73_08410	COG1256	bacterial-type flagellum assembly
J5V73_08415	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V73_08420	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
J5V73_08435	COG1815	bacterial-type flagellum-dependent cell motility
J5V73_08440	COG1558	bacterial-type flagellum-dependent cell motility
J5V73_08450	COG1766	The M ring may be actively involved in energy transduction
J5V73_08455	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V73_08465	COG1157	protein secretion by the type III secretion system
J5V73_08500	COG0835	chemotaxis
J5V73_08500	COG0784	Response regulator, receiver
J5V73_08520	COG0861	Integral membrane protein TerC family
J5V73_08530	COG3383	formate dehydrogenase (NAD+) activity
J5V73_08535	COG2427	Protein of unknown function (DUF1641)
J5V73_08540	COG5609	conserved protein (DUF2294)
J5V73_08545	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
J5V73_08555	COG2116	formate transmembrane transporter activity
J5V73_08560	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V73_08565	COG0303	'Molybdopterin
J5V73_08570	COG0314	molybdopterin synthase activity
J5V73_08585	COG0489	protein tyrosine kinase activity
J5V73_08590	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V73_08595	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
J5V73_08600	COG0741	lytic transglycosylase activity
J5V73_08610	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V73_08615	COG1776	CheC inhibitor of MCP methylation
J5V73_08615	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
J5V73_08625	COG1338	Plays a role in the flagellum-specific transport system
J5V73_08630	COG1987	bacterial-type flagellum assembly
J5V73_08640	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V73_08645	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
J5V73_08650	COG1419	protein localization to endoplasmic reticulum
J5V73_08655	COG4786	Flagellar basal body rod
J5V73_08695	COG2329	Antibiotic biosynthesis monooxygenase
J5V73_08710	COG2814	Major facilitator Superfamily
J5V73_08720	COG0583	DNA-binding transcription factor activity
J5V73_08725	COG3842	ATPase activity
J5V73_08740	COG1234	tRNA 3'-trailer cleavage
J5V73_08775	COG0406	alpha-ribazole phosphatase activity
J5V73_08805	COG0367	asparagine synthase
J5V73_08835	COG1802	Transcriptional regulator
J5V73_08840	COG0697	spore germination
J5V73_08855	COG1216	Glycosyl transferase, family 2
J5V73_08855	COG0438	transferase activity, transferring glycosyl groups
J5V73_08860	COG1757	Na H antiporter
J5V73_08890	COG0534	Mate efflux family protein
J5V73_08895	COG3340	Belongs to the peptidase S51 family
J5V73_08915	COG0785	Cytochrome C biogenesis protein
J5V73_08920	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_08935	COG3048	D-serine ammonia-lyase activity
J5V73_08940	COG2733	membrane
J5V73_08975	COG1131	(ABC) transporter
J5V73_08990	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V73_08995	COG0528	UMP kinase activity
J5V73_09005	COG1027	Aspartate ammonia-lyase
J5V73_09010	COG0281	malic enzyme
J5V73_09015	COG4191	Histidine kinase
J5V73_09020	COG0784	Response regulator, receiver
J5V73_09025	COG1846	Transcriptional regulator
J5V73_09035	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V73_09045	COG2502	aspartate--ammonia ligase
J5V73_09085	COG1051	belongs to the nudix hydrolase family
J5V73_09100	COG2814	Major facilitator Superfamily
J5V73_09115	COG1966	Carbon starvation protein
J5V73_09125	COG1695	Transcriptional regulator
J5V73_09140	COG0477	Major facilitator Superfamily
J5V73_09155	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V73_09160	COG2223	nitrite transmembrane transporter activity
J5V73_09165	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V73_09180	COG2244	polysaccharide biosynthetic process
J5V73_09185	COG0733	neurotransmitter:sodium symporter activity
J5V73_09195	COG5566	PFAM Mor transcription activator
J5V73_09200	COG2323	membrane
J5V73_09215	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V73_09220	COG2132	Multicopper oxidase
J5V73_09230	COG5002	protein histidine kinase activity
J5V73_09235	COG0745	RESPONSE REGULATOR receiver
J5V73_09245	COG0129	dihydroxy-acid dehydratase activity
J5V73_09250	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
J5V73_09275	COG2814	Major facilitator Superfamily
J5V73_09280	COG3384	dioxygenase
J5V73_09325	COG4166	transmembrane transport
J5V73_09330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_09340	COG1914	H( )-stimulated, divalent metal cation uptake system
J5V73_09345	COG1054	Belongs to the UPF0176 family
J5V73_09355	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V73_09360	COG0531	amino acid
J5V73_09380	COG1280	lysine exporter protein (LysE YggA)
J5V73_09400	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_09405	COG2390	Transcriptional regulator
J5V73_09415	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
J5V73_09420	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_09425	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
J5V73_09440	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V73_09465	COG0006	proline dipeptidase activity
J5V73_09470	COG2132	Multicopper oxidase
J5V73_09480	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V73_09500	COG1114	Component of the transport system for branched-chain amino acids
J5V73_09510	COG2372	response to copper ion
J5V73_09510	COG1276	copper resistance
J5V73_09515	COG4549	nuclear export factor GLE1
J5V73_09525	COG0697	spore germination
J5V73_09530	COG0583	DNA-binding transcription factor activity
J5V73_09535	COG1959	2 iron, 2 sulfur cluster binding
J5V73_09540	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
J5V73_09545	COG0778	Nitroreductase
J5V73_09565	COG0628	permease
J5V73_09580	COG1231	oxidoreductase activity
J5V73_09590	COG0523	cobalamin synthesis protein
J5V73_09600	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_09605	COG2030	dehydratase
J5V73_09610	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V73_09620	COG0411	ABC transporter
J5V73_09640	COG0583	DNA-binding transcription factor activity
J5V73_09650	COG1942	4-Oxalocrotonate Tautomerase
J5V73_09665	COG0346	lactoylglutathione lyase activity
J5V73_09675	COG1271	oxidase subunit
J5V73_09680	COG1294	oxidase, subunit
J5V73_09685	COG4988	ABC transporter
J5V73_09690	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
J5V73_09720	COG1686	Belongs to the peptidase S11 family
J5V73_09735	COG0791	NLP P60 protein
J5V73_09735	COG1388	LysM domain
J5V73_09745	COG1132	(ABC) transporter
J5V73_09750	COG0745	RESPONSE REGULATOR receiver
J5V73_09755	COG5002	protein histidine kinase activity
J5V73_09760	COG0300	oxidoreductase activity
J5V73_09795	COG0460	homoserine dehydrogenase
J5V73_09805	COG0083	homoserine kinase activity
J5V73_09820	COG1316	TRANSCRIPTIONal
J5V73_09830	COG0745	RESPONSE REGULATOR receiver
J5V73_09835	COG5002	protein histidine kinase activity
J5V73_09850	COG1285	pathogenesis
J5V73_09855	COG1247	-acetyltransferase
J5V73_09875	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V73_09885	COG1082	Xylose isomerase domain protein TIM barrel
J5V73_09895	COG2814	Major facilitator Superfamily
J5V73_09900	COG1279	arginine transmembrane transporter activity
J5V73_09905	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_09915	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V73_09945	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
J5V73_09950	COG0577	efflux transmembrane transporter activity
J5V73_09955	COG2002	toxin-antitoxin pair type II binding
J5V73_09960	COG1404	Belongs to the peptidase S8 family
J5V73_09965	COG0640	Transcriptional regulator
J5V73_09970	COG0667	Aldo Keto reductase
J5V73_09975	COG2814	Major facilitator Superfamily
J5V73_10015	COG3949	Membrane
J5V73_10020	COG0783	Belongs to the Dps family
J5V73_10035	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
J5V73_10045	COG1231	oxidoreductase activity
J5V73_10050	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_10055	COG4989	oxidoreductase activity
J5V73_10060	COG0523	cobalamin synthesis protein
J5V73_10065	COG0456	acetyltransferase
J5V73_10070	COG0803	Belongs to the bacterial solute-binding protein 9 family
J5V73_10085	COG1902	pentaerythritol trinitrate reductase activity
J5V73_10090	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V73_10100	COG4166	transmembrane transport
J5V73_10105	COG0346	lactoylglutathione lyase activity
J5V73_10125	COG5337	Spore coat protein CotH
J5V73_10130	COG1051	belongs to the nudix hydrolase family
J5V73_10135	COG0586	Pfam SNARE associated Golgi protein
J5V73_10140	COG2244	polysaccharide biosynthetic process
J5V73_10150	COG0701	Predicted permease
J5V73_10155	COG3689	TIGRFAM TIGR03943 family protein
J5V73_10160	COG1607	acyl-coa hydrolase
J5V73_10170	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V73_10185	COG0702	epimerase
J5V73_10190	COG2839	Protein conserved in bacteria
J5V73_10195	COG1253	flavin adenine dinucleotide binding
J5V73_10210	COG1114	Component of the transport system for branched-chain amino acids
J5V73_10215	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V73_10230	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_10240	COG1876	peptidase activity
J5V73_10245	COG0494	nUDIX hydrolase
J5V73_10255	COG2211	Major facilitator Superfamily
J5V73_10270	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_10280	COG0561	phosphatase activity
J5V73_10290	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
J5V73_10305	COG1819	glycosyl
J5V73_10310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_10315	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_10340	COG0456	acetyltransferase
J5V73_10375	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V73_10455	COG3874	Sporulation protein YtfJ
J5V73_10480	COG2226	methyltransferase
J5V73_10515	COG0604	alcohol dehydrogenase
J5V73_10520	COG1595	DNA-templated transcription, initiation
J5V73_10540	COG0426	domain, Protein
J5V73_10540	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V73_10550	COG0386	Belongs to the glutathione peroxidase family
J5V73_10555	COG1305	Transglutaminase-like
J5V73_10560	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
J5V73_10565	COG0714	Associated with various cellular activities
J5V73_10570	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
J5V73_10575	COG1140	nitrate reductase beta subunit
J5V73_10580	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
J5V73_10585	COG2181	nitrate reductase activity
J5V73_10590	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V73_10595	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5V73_10600	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V73_10605	COG0303	'Molybdopterin
J5V73_10610	COG0314	molybdopterin synthase activity
J5V73_10620	COG2223	nitrite transmembrane transporter activity
J5V73_10630	COG1648	precorrin-2 dehydrogenase activity
J5V73_10640	COG1587	Uroporphyrinogen-III synthase
J5V73_10640	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
J5V73_10645	COG2146	nitrite reductase [NAD(P)H] activity
J5V73_10650	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
J5V73_10655	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
J5V73_10685	COG2359	stage V sporulation protein S
J5V73_10695	COG1418	mRNA catabolic process
J5V73_10700	COG0488	(ABC) transporter
J5V73_10720	COG1413	lyase activity
J5V73_10735	COG2521	methyltransferase
J5V73_10735	COG2136	Putative SAM-dependent methyltransferase
J5V73_10740	COG0018	arginyl-trna synthetase
J5V73_10795	COG0017	Asparaginyl-tRNA synthetase
J5V73_10800	COG0733	neurotransmitter:sodium symporter activity
J5V73_10825	COG2610	gluconate transmembrane transporter activity
J5V73_10830	COG1454	alcohol dehydrogenase
J5V73_10835	COG1794	racemase activity, acting on amino acids and derivatives
J5V73_10845	COG0456	acetyltransferase
J5V73_10850	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
J5V73_10860	COG1131	(ABC) transporter
J5V73_10865	COG4473	ABC transporter
J5V73_10875	COG0546	phosphoglycolate phosphatase activity
J5V73_10890	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_10905	COG0768	penicillin binding
J5V73_10920	COG1272	protein, Hemolysin III
J5V73_10925	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
J5V73_10930	COG0805	protein transport
J5V73_10940	COG1307	EDD domain protein, DegV family
J5V73_10945	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V73_10950	COG1999	signal sequence binding
J5V73_10955	COG0071	Belongs to the small heat shock protein (HSP20) family
J5V73_10960	COG0367	asparagine synthase
J5V73_10975	COG0860	N-Acetylmuramoyl-L-alanine amidase
J5V73_10980	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_10985	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
J5V73_11025	COG1335	isochorismatase
J5V73_11035	COG0668	transmembrane transport
J5V73_11040	COG2203	Gaf domain
J5V73_11040	COG4585	Histidine kinase
J5V73_11045	COG2197	response regulator
J5V73_11050	COG1737	Transcriptional regulator
J5V73_11055	COG1064	alcohol dehydrogenase
J5V73_11070	COG1070	Carbohydrate kinase
J5V73_11080	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
J5V73_11100	COG0517	IMP dehydrogenase activity
J5V73_11100	COG1125	glycine betaine transport
J5V73_11105	COG1174	glycine betaine transport
J5V73_11140	COG1253	flavin adenine dinucleotide binding
J5V73_11145	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_11150	COG5506	Protein of unknown function (DUF1694)
J5V73_11165	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V73_11170	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
J5V73_11175	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
J5V73_11180	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V73_11185	COG0456	acetyltransferase
J5V73_11190	COG3829	transcription factor binding
J5V73_11195	COG1509	lysine 2,3-aminomutase activity
J5V73_11205	COG4479	Belongs to the UPF0346 family
J5V73_11230	COG4991	sh3 domain protein
J5V73_11230	COG0515	serine threonine protein kinase
J5V73_11230	COG3064	Membrane
J5V73_11240	COG0671	phosphoesterase, PA-phosphatase related
J5V73_11245	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V73_11250	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_11305	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
J5V73_11330	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_11350	COG4499	WXG100 protein secretion system (Wss), protein YukC
J5V73_11350	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V73_11360	COG2814	Major facilitator Superfamily
J5V73_11370	COG0372	Belongs to the citrate synthase family
J5V73_11375	COG2079	MmgE PrpD family protein
J5V73_11380	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
J5V73_11385	COG1960	acyl-CoA dehydrogenase activity
J5V73_11390	COG2084	Dehydrogenase
J5V73_11395	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_11400	COG1280	lysine exporter protein (LysE YggA)
J5V73_11405	COG1024	Enoyl-CoA hydratase
J5V73_11420	COG0420	3'-5' exonuclease activity
J5V73_11425	COG0419	ATPase involved in DNA repair
J5V73_11445	COG2223	nitrite transmembrane transporter activity
J5V73_11450	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_11455	COG1169	isochorismate synthase
J5V73_11460	COG1021	2,3-dihydroxybenzoate-AMP ligase
J5V73_11465	COG1535	isochorismatase
J5V73_11465	COG3433	isochorismatase activity
J5V73_11470	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
J5V73_11475	COG3251	PFAM MbtH domain protein
J5V73_11480	COG2814	Major facilitator Superfamily
J5V73_11495	COG0776	regulation of translation
J5V73_11505	COG2318	DinB family
J5V73_11510	COG1115	amino acid carrier protein
J5V73_11525	COG2329	Antibiotic biosynthesis monooxygenase
J5V73_11535	COG1187	pseudouridine synthase activity
J5V73_11540	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V73_11545	COG3655	Transcriptional regulator
J5V73_11555	COG1136	(ABC) transporter
J5V73_11565	COG0596	Alpha beta hydrolase
J5V73_11580	COG0028	Belongs to the TPP enzyme family
J5V73_11600	COG1253	flavin adenine dinucleotide binding
J5V73_11610	COG1234	tRNA 3'-trailer cleavage
J5V73_11650	COG1846	Transcriptional regulator
J5V73_11660	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_11665	COG1309	transcriptional regulator
J5V73_11675	COG0697	spore germination
J5V73_11705	COG1247	-acetyltransferase
J5V73_11735	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
J5V73_11745	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_11790	COG0561	phosphatase activity
J5V73_11800	COG0583	DNA-binding transcription factor activity
J5V73_11805	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V73_11840	COG0583	DNA-binding transcription factor activity
J5V73_11850	COG2258	MOSC domain
J5V73_11865	COG1132	(ABC) transporter
J5V73_11870	COG1132	(ABC) transporter
J5V73_11945	COG1396	sequence-specific DNA binding
J5V73_11975	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5V73_11985	COG3075	Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor
J5V73_11990	COG1595	DNA-templated transcription, initiation
J5V73_12030	COG2226	methyltransferase
J5V73_12045	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_12065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_12080	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_12150	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
J5V73_12150	COG2755	lipolytic protein G-D-S-L family
J5V73_12175	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
J5V73_12180	COG2971	BadF BadG BcrA BcrD
J5V73_12190	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
J5V73_12235	COG1309	transcriptional regulator
J5V73_12250	COG0577	efflux transmembrane transporter activity
J5V73_12250	COG1136	(ABC) transporter
J5V73_12255	COG0500	methyltransferase
J5V73_12255	COG3615	Tellurite resistance protein tehB
J5V73_12265	COG0693	protein deglycase activity
J5V73_12275	COG0588	phosphoglycerate mutase activity
J5V73_12300	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V73_12310	COG1686	Belongs to the peptidase S11 family
J5V73_12335	COG0768	penicillin binding
J5V73_12340	COG1595	DNA-templated transcription, initiation
J5V73_12350	COG0768	penicillin binding
J5V73_12355	COG0768	penicillin binding
J5V73_12365	COG1408	metallophosphoesterase
J5V73_12375	COG1131	(ABC) transporter
J5V73_12385	COG1309	transcriptional regulator
J5V73_12405	COG1960	acyl-CoA dehydrogenase activity
J5V73_12410	COG0439	Biotin carboxylase
J5V73_12415	COG0511	ligase activity, forming carbon-carbon bonds
J5V73_12420	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V73_12425	COG1024	Enoyl-CoA hydratase
J5V73_12430	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
J5V73_12435	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V73_12480	COG0572	uridine kinase
J5V73_12485	COG2318	DinB family
J5V73_12490	COG1686	Belongs to the peptidase S11 family
J5V73_12515	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V73_12540	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V73_12560	COG0693	protein deglycase activity
J5V73_12575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_12615	COG1309	transcriptional regulator
J5V73_12645	COG0697	spore germination
J5V73_12650	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_12670	COG1063	alcohol dehydrogenase
J5V73_12680	COG2323	membrane
J5V73_12695	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_12700	COG0697	spore germination
J5V73_12705	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V73_12710	COG0201	protein transport
J5V73_12720	COG0737	Belongs to the 5'-nucleotidase family
J5V73_12725	COG3227	Zinc metalloprotease (Elastase)
J5V73_12730	COG1523	belongs to the glycosyl hydrolase 13 family
J5V73_12745	COG0076	glutamate decarboxylase activity
J5V73_12750	COG0657	acetylesterase activity
J5V73_12755	COG1073	alpha beta
J5V73_12765	COG0577	efflux transmembrane transporter activity
J5V73_12770	COG1136	(ABC) transporter
J5V73_12780	COG5002	protein histidine kinase activity
J5V73_12785	COG0745	RESPONSE REGULATOR receiver
J5V73_12795	COG1011	Hydrolase
J5V73_12820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V73_12825	COG1183	phosphatidylcholine synthase activity
J5V73_12835	COG1132	(ABC) transporter
J5V73_12840	COG3961	Belongs to the TPP enzyme family
J5V73_12860	COG0322	excinuclease ABC activity
J5V73_12885	COG2318	DinB family
J5V73_12900	COG4667	esterase of the alpha-beta hydrolase superfamily
J5V73_12925	COG3878	Protein conserved in bacteria
J5V73_12965	COG1051	belongs to the nudix hydrolase family
J5V73_12970	COG0592	DNA-directed DNA polymerase activity
J5V73_12975	COG2816	NAD+ diphosphatase activity
J5V73_12980	COG2223	nitrite transmembrane transporter activity
J5V73_12990	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_13000	COG0494	nUDIX hydrolase
J5V73_13020	COG0697	spore germination
J5V73_13025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_13040	COG0584	glycerophosphoryl diester phosphodiesterase
J5V73_13055	COG1733	regulation of RNA biosynthetic process
J5V73_13060	COG2814	Major facilitator Superfamily
J5V73_13100	COG0768	penicillin binding
J5V73_13105	COG0671	phosphoesterase, PA-phosphatase related
J5V73_13110	COG0604	alcohol dehydrogenase
J5V73_13115	COG5002	protein histidine kinase activity
J5V73_13120	COG0745	RESPONSE REGULATOR receiver
J5V73_13130	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V73_13140	COG2205	protein histidine kinase activity
J5V73_13155	COG1122	ATPase activity
J5V73_13160	COG4720	Psort location CytoplasmicMembrane, score
J5V73_13165	COG1794	racemase activity, acting on amino acids and derivatives
J5V73_13170	COG1819	glycosyl
J5V73_13180	COG0768	penicillin binding
J5V73_13185	COG5002	protein histidine kinase activity
J5V73_13190	COG0561	phosphatase activity
J5V73_13235	COG2124	cytochrome p450
J5V73_13275	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
J5V73_13285	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_13290	COG0460	homoserine dehydrogenase
J5V73_13310	COG0577	efflux transmembrane transporter activity
J5V73_13315	COG1136	(ABC) transporter
J5V73_13330	COG0488	(ABC) transporter
J5V73_13335	COG0667	Aldo Keto reductase
J5V73_13340	COG0583	DNA-binding transcription factor activity
J5V73_13345	COG2205	protein histidine kinase activity
J5V73_13350	COG0745	RESPONSE REGULATOR receiver
J5V73_13360	COG3773	Cell wall hydrolase
J5V73_13365	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
J5V73_13375	COG3386	PFAM SMP-30 Gluconolaconase
J5V73_13380	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
J5V73_13415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_13430	COG2959	enzyme of heme biosynthesis
J5V73_13455	COG3483	tryptophan 2,3-dioxygenase activity
J5V73_13460	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
J5V73_13465	COG3844	kynureninase activity
J5V73_13470	COG1309	transcriptional regulator
J5V73_13485	COG3284	Transcriptional regulator
J5V73_13500	COG1349	DNA-binding transcription factor activity
J5V73_13520	COG4824	toxin secretion phage lysis holin
J5V73_13535	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V73_13540	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V73_13545	COG0022	dehydrogenase e1 component
J5V73_13550	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V73_13560	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_13565	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V73_13565	COG0456	acetyltransferase
J5V73_13600	COG4176	ABC-type proline glycine betaine transport system permease component
J5V73_13605	COG4175	Glycine betaine
J5V73_13605	COG0517	IMP dehydrogenase activity
J5V73_13630	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
J5V73_13635	COG2153	protein acetylation
J5V73_13640	COG3397	chitin binding
J5V73_13650	COG1819	glycosyl
J5V73_13670	COG2205	protein histidine kinase activity
J5V73_13675	COG2315	Protein conserved in bacteria
J5V73_13720	COG3973	AAA domain
J5V73_13730	COG2105	PFAM AIG2 family protein
J5V73_13735	COG0514	ATP-dependent DNA helicase (RecQ)
J5V73_13760	COG4637	Psort location Cytoplasmic, score
J5V73_13770	COG1227	inorganic diphosphatase activity
J5V73_13775	COG3397	chitin binding
J5V73_13780	COG2318	DinB family
J5V73_13795	COG1162	GTPase activity
J5V73_13800	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
J5V73_13805	COG1115	amino acid carrier protein
J5V73_13810	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_13815	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
J5V73_13825	COG3938	Belongs to the proline racemase family
J5V73_13830	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V73_13870	COG0586	Pfam SNARE associated Golgi protein
J5V73_13885	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
J5V73_13890	COG4166	transmembrane transport
J5V73_13900	COG4948	Mandelate Racemase Muconate Lactonizing
J5V73_13920	COG0667	Aldo Keto reductase
J5V73_13970	COG2936	dipeptidyl-peptidase activity
J5V73_13980	COG0745	RESPONSE REGULATOR receiver
J5V73_14005	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V73_14015	COG1164	Oligoendopeptidase f
J5V73_14020	COG1307	EDD domain protein, DegV family
J5V73_14070	COG2814	Major facilitator Superfamily
J5V73_14080	COG1664	Polymer-forming cytoskeletal
J5V73_14085	COG0789	Transcriptional regulator
J5V73_14090	COG4533	DNA binding
J5V73_14095	COG2814	Major facilitator Superfamily
J5V73_14095	COG0477	Major facilitator Superfamily
J5V73_14115	COG2261	transglycosylase associated protein
J5V73_14130	COG2226	methyltransferase
J5V73_14165	COG0436	Aminotransferase
J5V73_14170	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
J5V73_14180	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
J5V73_14195	COG1131	(ABC) transporter
J5V73_14200	COG2188	Transcriptional regulator
J5V73_14240	COG0628	permease
J5V73_14270	COG2746	aminoglycoside 3-N-acetyltransferase activity
J5V73_14290	COG0697	spore germination
J5V73_14295	COG2318	DinB family
J5V73_14315	COG4912	Dna alkylation repair
J5V73_14345	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V73_14365	COG1368	sulfuric ester hydrolase activity
J5V73_14375	COG0488	(ABC) transporter
J5V73_14380	COG2409	Drug exporters of the RND superfamily
J5V73_14380	COG1033	growth of symbiont in host cell
J5V73_14385	COG1309	transcriptional regulator
J5V73_14390	COG0494	nUDIX hydrolase
J5V73_14410	COG0287	Prephenate dehydrogenase
J5V73_14425	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J5V73_14425	COG1605	Chorismate mutase
J5V73_14445	COG0189	ligase activity
J5V73_14485	COG1388	LysM domain
J5V73_14485	COG3584	3D domain protein
J5V73_14495	COG0346	lactoylglutathione lyase activity
J5V73_14500	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J5V73_14505	COG0431	NADPH-dependent FMN reductase
J5V73_14535	COG0579	oxidoreductase
J5V73_14540	COG1879	ABC-type sugar transport system periplasmic component
J5V73_14555	COG1129	ABC transporter
J5V73_14560	COG2390	Transcriptional regulator
J5V73_14580	COG2226	methyltransferase
J5V73_14595	COG2329	Antibiotic biosynthesis monooxygenase
J5V73_14625	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_14630	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
J5V73_14635	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
J5V73_14640	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V73_14645	COG3239	Fatty acid desaturase
J5V73_14655	COG3842	ATPase activity
J5V73_14680	COG1175	transmembrane transport
J5V73_14685	COG1349	DNA-binding transcription factor activity
J5V73_14695	COG3655	Transcriptional regulator
J5V73_14735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_14740	COG0346	lactoylglutathione lyase activity
J5V73_14760	COG0714	Associated with various cellular activities
J5V73_14780	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
J5V73_14785	COG0753	catalase activity
J5V73_14795	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
J5V73_14820	COG0714	Associated with various cellular activities
J5V73_14830	COG0778	Nitroreductase
J5V73_14835	COG1846	Transcriptional regulator
J5V73_14855	COG0179	Fumarylacetoacetate (FAA) hydrolase
J5V73_14865	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
J5V73_14875	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_14880	COG0183	Belongs to the thiolase family
J5V73_14885	COG1024	Enoyl-CoA hydratase
J5V73_14890	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V73_14895	COG2723	6-phospho-beta-galactosidase activity
J5V73_14900	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V73_14905	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_14920	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_14930	COG2508	Transcriptional regulator
J5V73_14935	COG2814	Major facilitator Superfamily
J5V73_14950	COG3831	ATPase activity
J5V73_14950	COG4884	unkown
J5V73_14960	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_14965	COG1309	transcriptional regulator
J5V73_14995	COG2207	Transcriptional regulator
J5V73_15000	COG0456	acetyltransferase
J5V73_15015	COG0697	spore germination
J5V73_15020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_15025	COG1671	Belongs to the UPF0178 family
J5V73_15045	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V73_15045	COG0456	acetyltransferase
J5V73_15070	COG0730	response to heat
J5V73_15080	COG0833	amino acid
J5V73_15090	COG4335	DNA alkylation repair
J5V73_15120	COG0768	penicillin binding
J5V73_15130	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
J5V73_15145	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
J5V73_15150	COG1984	allophanate hydrolase subunit 2
J5V73_15155	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
J5V73_15160	COG1414	Transcriptional regulator
J5V73_15180	COG0640	Transcriptional regulator
J5V73_15190	COG1960	acyl-CoA dehydrogenase activity
J5V73_15215	COG0640	Transcriptional regulator
J5V73_15225	COG3314	Sporulation integral membrane protein YlbJ
J5V73_15245	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
J5V73_15260	COG0574	Belongs to the PEP-utilizing enzyme family
J5V73_15260	COG3848	Pyruvate phosphate dikinase
J5V73_15270	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
J5V73_15285	COG0737	Belongs to the 5'-nucleotidase family
J5V73_15290	COG2267	carboxylic ester hydrolase activity
J5V73_15295	COG1335	isochorismatase
J5V73_15320	COG0583	DNA-binding transcription factor activity
J5V73_15330	COG2814	Major facilitator Superfamily
J5V73_15335	COG1309	transcriptional regulator
J5V73_15405	COG5002	protein histidine kinase activity
J5V73_15410	COG0745	RESPONSE REGULATOR receiver
J5V73_15420	COG1575	Belongs to the MenA family. Type 1 subfamily
J5V73_15440	COG0798	PFAM Bile acid sodium symporter
J5V73_15445	COG0346	lactoylglutathione lyase activity
J5V73_15450	COG0640	Transcriptional regulator
J5V73_15460	COG1090	epimerase
J5V73_15465	COG1309	transcriptional regulator
J5V73_15470	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_15475	COG1522	sequence-specific DNA binding
J5V73_15490	COG0346	lactoylglutathione lyase activity
J5V73_15515	COG0745	RESPONSE REGULATOR receiver
J5V73_15520	COG3850	Histidine kinase
J5V73_15520	COG5002	protein histidine kinase activity
J5V73_15565	COG0277	FAD linked oxidase domain protein
J5V73_15575	COG1136	(ABC) transporter
J5V73_15595	COG0577	efflux transmembrane transporter activity
J5V73_15600	COG1136	(ABC) transporter
J5V73_15605	COG2205	protein histidine kinase activity
J5V73_15610	COG0745	RESPONSE REGULATOR receiver
J5V73_15625	COG2814	Major facilitator Superfamily
J5V73_15640	COG2515	1-aminocyclopropane-1-carboxylate deaminase
J5V73_15690	COG4977	sequence-specific DNA binding
J5V73_15740	COG0662	Cupin 2, conserved barrel domain protein
J5V73_15755	COG2318	DinB family
J5V73_15790	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
J5V73_15805	COG1136	(ABC) transporter
J5V73_15810	COG0577	efflux transmembrane transporter activity
J5V73_15825	COG3850	Histidine kinase
J5V73_15825	COG5002	protein histidine kinase activity
J5V73_15835	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_15860	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V73_15880	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
J5V73_15920	COG2814	Major facilitator Superfamily
J5V73_16005	COG2849	repeat protein
J5V73_16010	COG5444	nuclease activity
J5V73_16050	COG0477	Major facilitator Superfamily
J5V73_16065	COG1846	Transcriptional regulator
J5V73_16070	COG2814	Major facilitator Superfamily
J5V73_16090	COG0640	Transcriptional regulator
J5V73_16110	COG4257	antibiotic catabolic process
J5V73_16125	COG1309	transcriptional regulator
J5V73_16130	COG2814	Major facilitator Superfamily
J5V73_16170	COG5002	protein histidine kinase activity
J5V73_16185	COG1136	(ABC) transporter
J5V73_16200	COG1131	(ABC) transporter
J5V73_16295	COG4187	Peptidase family M20/M25/M40
J5V73_16300	COG1414	Transcriptional regulator
J5V73_16305	COG0833	amino acid
J5V73_16325	COG2031	fatty acid transporter
J5V73_16380	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
J5V73_16385	COG1288	antiporter activity
J5V73_16390	COG2356	endonuclease I
J5V73_16395	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V73_16400	COG3620	sequence-specific DNA binding
J5V73_16430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V73_16435	COG0384	phenazine biosynthesis protein PhzF
J5V73_16440	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
J5V73_16460	COG1785	Belongs to the alkaline phosphatase family
J5V73_16465	COG0778	Nitroreductase
J5V73_16470	COG1733	regulation of RNA biosynthetic process
J5V73_16490	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_16500	COG1131	(ABC) transporter
J5V73_16530	COG1595	DNA-templated transcription, initiation
J5V73_16545	COG1011	Hydrolase
J5V73_16550	COG2365	Tyrosine phosphatase family
J5V73_16585	COG0628	permease
J5V73_16590	COG2261	transglycosylase associated protein
J5V73_16625	COG0477	Major facilitator Superfamily
J5V73_16645	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
J5V73_16655	COG1253	flavin adenine dinucleotide binding
J5V73_16660	COG0789	Transcriptional regulator
J5V73_16665	COG0697	spore germination
J5V73_16670	COG1357	PFAM Pentapeptide repeats (8 copies)
J5V73_16675	COG3813	Protein conserved in bacteria
J5V73_16680	COG4702	Belongs to the UPF0303 family
J5V73_16690	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_16705	COG0494	nUDIX hydrolase
J5V73_16720	COG0384	phenazine biosynthesis protein PhzF
J5V73_16730	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_16740	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_16745	COG2249	NAD(P)H dehydrogenase (quinone) activity
J5V73_16750	COG1733	regulation of RNA biosynthetic process
J5V73_16765	COG1191	sigma factor activity
J5V73_16780	COG1876	peptidase activity
J5V73_16820	COG0741	lytic transglycosylase activity
J5V73_16845	COG5002	protein histidine kinase activity
J5V73_16850	COG0745	RESPONSE REGULATOR receiver
J5V73_16890	COG0814	amino acid
J5V73_16915	COG1151	hydroxylamine reductase activity
J5V73_16955	COG2072	flavoprotein involved in K transport
J5V73_17005	COG1695	Transcriptional regulator
J5V73_17010	COG0604	alcohol dehydrogenase
J5V73_17015	COG1113	amino acid transport
J5V73_17035	COG5002	protein histidine kinase activity
J5V73_17040	COG0745	RESPONSE REGULATOR receiver
J5V73_17045	COG5002	protein histidine kinase activity
J5V73_17050	COG2814	Major facilitator Superfamily
J5V73_17060	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V73_17065	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_17075	COG0534	Mate efflux family protein
J5V73_17080	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_17085	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
J5V73_17100	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V73_17105	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V73_17125	COG3739	integral membrane protein
J5V73_17155	COG0583	DNA-binding transcription factor activity
J5V73_17175	COG1193	negative regulation of DNA recombination
J5V73_17195	COG2162	N-hydroxyarylamine O-acetyltransferase activity
J5V73_17200	COG1164	Oligoendopeptidase f
J5V73_17225	COG3781	membrane
J5V73_17240	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
J5V73_17270	COG0640	Transcriptional regulator
J5V73_17275	COG0604	alcohol dehydrogenase
J5V73_17290	COG0457	Tetratricopeptide repeat
J5V73_17300	COG2808	Putative FMN-binding domain
J5V73_17305	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V73_17315	COG0277	FAD linked oxidase domain protein
J5V73_17335	COG1285	pathogenesis
J5V73_17345	COG2514	catechol 2,3-dioxygenase activity
J5V73_17350	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_17355	COG1126	abc transporter atp-binding protein
J5V73_17360	COG0765	amino acid transport
J5V73_17365	COG2720	vancomycin resistance protein
J5V73_17390	COG1278	Cold shock
J5V73_17400	COG0716	FMN binding
J5V73_17410	COG0494	nUDIX hydrolase
J5V73_17430	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_17440	COG0165	Argininosuccinate lyase
J5V73_17455	COG4145	pantothenate transmembrane transporter activity
J5V73_17465	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_17470	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_17480	COG1657	PFAM Prenyltransferase squalene oxidase
J5V73_17485	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
J5V73_17490	COG2962	Rard protein
J5V73_17495	COG3326	Membrane
J5V73_17530	COG2226	methyltransferase
J5V73_17535	COG4166	transmembrane transport
J5V73_17540	COG4166	transmembrane transport
J5V73_17545	COG4166	transmembrane transport
J5V73_17555	COG1131	(ABC) transporter
J5V73_17575	COG0673	inositol 2-dehydrogenase activity
J5V73_17580	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
J5V73_17585	COG0187	DNA topoisomerase II activity
J5V73_17590	COG1832	CoA-binding protein
J5V73_17595	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V73_17600	COG0745	RESPONSE REGULATOR receiver
J5V73_17610	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5V73_17610	COG1328	CTP reductase activity
J5V73_17620	COG4841	protein insertion into membrane
J5V73_17625	COG0824	Thioesterase
J5V73_17655	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_17670	COG1132	(ABC) transporter
J5V73_17675	COG1266	CAAX protease self-immunity
J5V73_17680	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
J5V73_17710	COG2211	Major facilitator Superfamily
J5V73_17720	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V73_17735	COG0183	Belongs to the thiolase family
J5V73_17740	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_17745	COG1268	BioY protein
J5V73_17750	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_17755	COG1396	sequence-specific DNA binding
J5V73_17790	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_17800	COG5002	protein histidine kinase activity
J5V73_17810	COG0400	carboxylic ester hydrolase activity
J5V73_17815	COG0346	lactoylglutathione lyase activity
J5V73_17820	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
J5V73_17825	COG0069	glutamate synthase activity
J5V73_17830	COG1902	pentaerythritol trinitrate reductase activity
J5V73_17840	COG1329	Transcriptional regulator
J5V73_17845	COG0010	Belongs to the arginase family
J5V73_17850	COG1228	amidohydrolase
J5V73_17855	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
J5V73_17860	COG2986	histidine ammonia-lyase
J5V73_17870	COG2226	methyltransferase
J5V73_17895	COG4846	Membrane protein involved in cytochrome C biogenesis
J5V73_17900	COG0785	Cytochrome C biogenesis protein
J5V73_17910	COG1473	amidohydrolase
J5V73_17915	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V73_17920	COG1131	(ABC) transporter
J5V73_17930	COG0583	DNA-binding transcription factor activity
J5V73_17940	COG1346	cytolysis
J5V73_17955	COG0730	response to heat
J5V73_17965	COG5632	N-Acetylmuramoyl-L-alanine amidase
J5V73_17965	COG3409	Peptidoglycan-binding domain 1 protein
J5V73_17985	COG1132	(ABC) transporter
J5V73_17990	COG1132	(ABC) transporter
J5V73_17995	COG3763	UPF0154 protein
J5V73_18015	COG3639	organic phosphonate transmembrane transporter activity
J5V73_18025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_18030	COG0737	Belongs to the 5'-nucleotidase family
J5V73_18040	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
J5V73_18045	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
J5V73_18060	COG1695	Transcriptional regulator
J5V73_18065	COG1132	(ABC) transporter
J5V73_18100	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
J5V73_18105	COG0110	maltose O-acetyltransferase activity
J5V73_18110	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
J5V73_18120	COG5434	Belongs to the glycosyl hydrolase 28 family
J5V73_18125	COG1442	glycosyl transferase family 8
J5V73_18125	COG1216	Glycosyl transferase, family 2
J5V73_18130	COG0438	transferase activity, transferring glycosyl groups
J5V73_18160	COG1216	Glycosyl transferase, family 2
J5V73_18180	COG0463	Glycosyl transferase, family 2
J5V73_18180	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
J5V73_18185	COG0438	transferase activity, transferring glycosyl groups
J5V73_18190	COG0438	transferase activity, transferring glycosyl groups
J5V73_18195	COG1086	Polysaccharide biosynthesis protein
J5V73_18200	COG0489	protein tyrosine kinase activity
J5V73_18205	COG3944	biosynthesis protein
J5V73_18210	COG0174	glutamine synthetase
J5V73_18215	COG0789	Transcriptional regulator
J5V73_18220	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
J5V73_18225	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
J5V73_18230	COG2860	membrane
J5V73_18240	COG0464	growth
J5V73_18260	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
J5V73_18270	COG1388	LysM domain
J5V73_18270	COG3584	3D domain protein
J5V73_18275	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V73_18275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V73_18275	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
J5V73_18280	COG1105	Belongs to the carbohydrate kinase PfkB family
J5V73_18285	COG1349	DNA-binding transcription factor activity
J5V73_18290	COG1979	alcohol dehydrogenase
J5V73_18295	COG2322	membrane
J5V73_18305	COG1408	metallophosphoesterase
J5V73_18310	COG2116	formate transmembrane transporter activity
J5V73_18325	COG2217	Heavy metal translocating P-type atpase
J5V73_18330	COG2608	mercury ion transmembrane transporter activity
J5V73_18335	COG1937	Protein conserved in bacteria
J5V73_18355	COG2819	hydrolase of the alpha beta superfamily
J5V73_18360	COG1120	ATPase activity
J5V73_18365	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_18370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_18375	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_18380	COG0708	Exodeoxyribonuclease III
J5V73_18385	COG2169	Transcriptional regulator
J5V73_18390	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
J5V73_18395	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
J5V73_18405	COG2706	6-phosphogluconolactonase activity
J5V73_18410	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V73_18415	COG2364	Membrane
J5V73_18430	COG0346	lactoylglutathione lyase activity
J5V73_18435	COG5001	Diguanylate cyclase
J5V73_18435	COG3300	MHYT domain
J5V73_18455	COG1086	Polysaccharide biosynthesis protein
J5V73_18475	COG1346	cytolysis
J5V73_18485	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_18495	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
J5V73_18505	COG2188	Transcriptional regulator
J5V73_18510	COG2723	6-phospho-beta-galactosidase activity
J5V73_18520	COG3773	Cell wall hydrolase
J5V73_18530	COG1368	sulfuric ester hydrolase activity
J5V73_18535	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
J5V73_18545	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
J5V73_18550	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
J5V73_18555	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
J5V73_18565	COG4550	Control of competence regulator ComK, YlbF/YmcA
J5V73_18570	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V73_18575	COG1013	pyruvate-flavodoxin oxidoreductase activity
J5V73_18580	COG0674	pyruvate-flavodoxin oxidoreductase activity
J5V73_18580	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
J5V73_18590	COG2359	stage V sporulation protein S
J5V73_18595	COG1692	metallophosphoesterase
J5V73_18600	COG1418	mRNA catabolic process
J5V73_18605	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
J5V73_18620	COG1546	Belongs to the CinA family
J5V73_18620	COG1058	Belongs to the CinA family
J5V73_18625	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
J5V73_18630	COG1426	Protein conserved in bacteria
J5V73_18645	COG0300	oxidoreductase activity
J5V73_18650	COG0612	Peptidase, M16
J5V73_18655	COG0612	Peptidase, M16
J5V73_18660	COG1079	Belongs to the binding-protein-dependent transport system permease family
J5V73_18665	COG4603	Belongs to the binding-protein-dependent transport system permease family
J5V73_18670	COG3845	ABC transporter
J5V73_18675	COG1744	ABC transporter substrate-binding protein PnrA-like
J5V73_18680	COG2188	Transcriptional regulator
J5V73_18690	COG1674	ftsk spoiiie
J5V73_18700	COG0740	serine-type endopeptidase activity
J5V73_18705	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V73_18715	COG0527	aspartate kinase activity
J5V73_18720	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
J5V73_18725	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V73_18730	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V73_18735	COG1873	PFAM PRC-barrel domain
J5V73_18740	COG0612	Peptidase, M16
J5V73_18745	COG0726	polysaccharide deacetylase
J5V73_18750	COG1185	polyribonucleotide nucleotidyltransferase activity
J5V73_18760	COG0196	riboflavin kinase activity
J5V73_18770	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
J5V73_18775	COG1550	Protein conserved in bacteria
J5V73_18780	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
J5V73_18785	COG1358	cellular component organization or biogenesis
J5V73_18790	COG2740	Nucleic-acid-binding protein implicated in transcription termination
J5V73_18795	COG0195	Participates in both transcription termination and antitermination
J5V73_18800	COG0779	Required for maturation of 30S ribosomal subunits
J5V73_18810	COG0442	prolyl-tRNA aminoacylation
J5V73_18815	COG0750	zinc metalloprotease
J5V73_18825	COG4589	Belongs to the CDS family
J5V73_18835	COG0233	cytoplasmic translational termination
J5V73_18840	COG0528	UMP kinase activity
J5V73_18845	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
J5V73_18850	COG0052	Belongs to the universal ribosomal protein uS2 family
J5V73_18855	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V73_18860	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
J5V73_18865	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
J5V73_18870	COG4974	Belongs to the 'phage' integrase family
J5V73_18875	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
J5V73_18880	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
J5V73_18885	COG0758	DNA mediated transformation
J5V73_18890	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
J5V73_18895	COG0045	succinate-CoA ligase (ADP-forming) activity
J5V73_18900	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V73_18915	COG0335	large ribosomal subunit rRNA binding
J5V73_18920	COG0336	Belongs to the RNA methyltransferase TrmD family
J5V73_18925	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
J5V73_18930	COG1837	Belongs to the UPF0109 family
J5V73_18940	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
J5V73_18950	COG0552	protein localization to endoplasmic reticulum
J5V73_18955	COG1196	nuclear chromosome segregation
J5V73_18960	COG0571	ribonuclease III activity
J5V73_18965	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
J5V73_18970	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_18975	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
J5V73_18980	COG0416	fatty acid biosynthetic process
J5V73_18985	COG2050	protein possibly involved in aromatic compounds catabolism
J5V73_18985	COG1349	DNA-binding transcription factor activity
J5V73_18990	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
J5V73_18995	COG1461	Dihydroxyacetone kinase
J5V73_19000	COG1302	Protein conserved in bacteria
J5V73_19015	COG1564	THIamine pyrophosphokinase
J5V73_19020	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
J5V73_19030	COG0515	serine threonine protein kinase
J5V73_19030	COG2815	serine threonine protein kinase
J5V73_19035	COG0631	protein serine/threonine phosphatase activity
J5V73_19040	COG0820	rRNA (adenine-C2-)-methyltransferase activity
J5V73_19045	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V73_19045	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
J5V73_19050	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
J5V73_19055	COG0242	peptide deformylase activity
J5V73_19060	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
J5V73_19065	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
J5V73_19070	COG1758	RNA polymerase activity
J5V73_19085	COG1561	YicC-like family, N-terminal region
J5V73_19090	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
J5V73_19100	COG0006	proline dipeptidase activity
J5V73_19115	COG3069	C4-dicarboxylate transmembrane transporter activity
J5V73_19125	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
J5V73_19135	COG0167	dihydroorotate dehydrogenase activity
J5V73_19140	COG0543	2 iron, 2 sulfur cluster binding
J5V73_19145	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
J5V73_19155	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
J5V73_19160	COG0540	Belongs to the ATCase OTCase family
J5V73_19170	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
J5V73_19175	COG0564	pseudouridine synthase activity
J5V73_19180	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
J5V73_19190	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
J5V73_19195	COG3599	regulation of cell shape
J5V73_19200	COG2302	S4 RNA-binding domain
J5V73_19205	COG0762	integral membrane protein
J5V73_19210	COG1799	cell septum assembly
J5V73_19215	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
J5V73_19225	COG1873	PFAM PRC-barrel domain
J5V73_19230	COG1191	sigma factor activity
J5V73_19235	COG1191	sigma factor activity
J5V73_19245	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
J5V73_19250	COG0849	cell division
J5V73_19255	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
J5V73_19270	COG0772	Belongs to the SEDS family
J5V73_19275	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
J5V73_19280	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V73_19285	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
J5V73_19290	COG0768	penicillin binding
J5V73_19295	COG0768	penicillin binding
J5V73_19305	COG0275	rRNA processing
J5V73_19310	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
J5V73_19315	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
J5V73_19320	COG0454	-acetyltransferase
J5V73_19330	COG0333	Belongs to the bacterial ribosomal protein bL32 family
J5V73_19335	COG1399	metal-binding, possibly nucleic acid-binding protein
J5V73_19340	COG1323	Belongs to the UPF0348 family
J5V73_19345	COG3480	Lon protease (S16) C-terminal proteolytic domain
J5V73_19350	COG1752	Esterase of the alpha-beta hydrolase superfamily
J5V73_19355	COG3314	Sporulation integral membrane protein YlbJ
J5V73_19365	COG0742	ribosomal rna small subunit methyltransferase
J5V73_19375	COG4471	UPF0298 protein
J5V73_19380	COG3679	Belongs to the UPF0342 family
J5V73_19385	COG0406	alpha-ribazole phosphatase activity
J5V73_19400	COG2340	Cysteine-rich secretory protein family
J5V73_19410	COG3336	cytochrome c oxidase
J5V73_19435	COG0109	protoheme IX farnesyltransferase activity
J5V73_19440	COG1612	heme a metabolic process
J5V73_19445	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
J5V73_19450	COG0772	Belongs to the SEDS family
J5V73_19455	COG4838	Belongs to the UPF0358 family
J5V73_19460	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
J5V73_19465	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
J5V73_19475	COG4896	Protein conserved in bacteria
J5V73_19490	COG1217	gtp-binding protein TYPA
J5V73_19500	COG0483	inositol monophosphate 1-phosphatase activity
J5V73_19510	COG4493	Belongs to the UPF0637 family
J5V73_19515	COG4476	Belongs to the UPF0223 family
J5V73_19520	COG1982	Orn Lys Arg decarboxylase major
J5V73_19565	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V73_19570	COG0022	dehydrogenase e1 component
J5V73_19575	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V73_19590	COG0561	phosphatase activity
J5V73_19595	COG5503	Protein of unknown function (DUF1447)
J5V73_19600	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
J5V73_19605	COG0569	domain protein
J5V73_19615	COG1473	amidohydrolase
J5V73_19620	COG2171	N-acyltransferase activity
J5V73_19625	COG0583	DNA-binding transcription factor activity
J5V73_19630	COG0517	IMP dehydrogenase activity
J5V73_19640	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
J5V73_19650	COG4703	Protein of unknown function (DUF1797)
J5V73_19665	COG2200	EAL domain
J5V73_19670	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_19675	COG1408	metallophosphoesterase
J5V73_19720	COG2814	Major facilitator Superfamily
J5V73_19730	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
J5V73_19740	COG3209	COG3209 Rhs family protein
J5V73_19750	COG2205	protein histidine kinase activity
J5V73_19760	COG0436	Aminotransferase
J5V73_19765	COG1609	Transcriptional regulator
J5V73_19770	COG3833	ABC-type maltose transport systems, permease component
J5V73_19775	COG1175	transmembrane transport
J5V73_19780	COG2182	Extracellular solute-binding protein
J5V73_19790	COG0366	Alpha amylase catalytic
J5V73_19795	COG3842	ATPase activity
J5V73_19835	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
J5V73_19840	COG0183	Belongs to the thiolase family
J5V73_19870	COG1695	Transcriptional regulator
J5V73_19875	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_19885	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
J5V73_19890	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
J5V73_19895	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
J5V73_19900	COG0436	Aminotransferase
J5V73_19905	COG1850	ribulose-bisphosphate carboxylase activity
J5V73_19915	COG0235	Class ii aldolase
J5V73_19920	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
J5V73_19935	COG2084	Dehydrogenase
J5V73_19945	COG2199	diguanylate cyclase activity
J5V73_19950	COG0778	Nitroreductase
J5V73_19975	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
J5V73_19975	COG1263	PTS System
J5V73_19975	COG2190	(PTS) system
J5V73_19980	COG3711	transcriptional antiterminator
J5V73_19990	COG2188	Transcriptional regulator
J5V73_19995	COG0363	glucosamine-6-phosphate deaminase activity
J5V73_20000	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
J5V73_20010	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
J5V73_20015	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
J5V73_20025	COG1547	Domain of unknown function (DUF309)
J5V73_20035	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
J5V73_20040	COG4086	secreted protein
J5V73_20045	COG0561	phosphatase activity
J5V73_20050	COG0697	spore germination
J5V73_20065	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V73_20090	COG0733	neurotransmitter:sodium symporter activity
J5V73_20110	COG1686	Belongs to the peptidase S11 family
J5V73_20115	COG1725	Transcriptional regulator
J5V73_20120	COG1131	(ABC) transporter
J5V73_20140	COG1846	Transcriptional regulator
J5V73_20155	COG0598	Magnesium transport protein CorA
J5V73_20170	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
J5V73_20180	COG4974	Belongs to the 'phage' integrase family
J5V73_20190	COG0735	belongs to the Fur family
J5V73_20195	COG1300	Membrane
J5V73_20215	COG0667	Aldo Keto reductase
J5V73_20220	COG0656	L-ascorbic acid biosynthetic process
J5V73_20225	COG0456	acetyltransferase
J5V73_20225	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
J5V73_20235	COG4085	toxin activity
J5V73_20235	COG0737	Belongs to the 5'-nucleotidase family
J5V73_20235	COG1525	nuclease
J5V73_20250	COG0596	Alpha beta hydrolase
J5V73_20255	COG2056	Na+-H+ antiporter family
J5V73_20260	COG1609	Transcriptional regulator
J5V73_20265	COG0456	acetyltransferase
J5V73_20270	COG1073	alpha beta
J5V73_20285	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V73_20285	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
J5V73_20290	COG0307	riboflavin synthase, alpha
J5V73_20295	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V73_20295	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
J5V73_20310	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
J5V73_20315	COG4106	trans-aconitate 2-methyltransferase activity
J5V73_20320	COG1073	alpha beta
J5V73_20320	COG2226	methyltransferase
J5V73_20325	COG0156	8-amino-7-oxononanoate synthase activity
J5V73_20335	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
J5V73_20345	COG1757	Na H antiporter
J5V73_20350	COG0737	Belongs to the 5'-nucleotidase family
J5V73_20360	COG1522	sequence-specific DNA binding
J5V73_20395	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
J5V73_20405	COG0300	oxidoreductase activity
J5V73_20410	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_20415	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V73_20420	COG1760	l-serine dehydratase
J5V73_20425	COG1760	l-serine dehydratase
J5V73_20435	COG1234	tRNA 3'-trailer cleavage
J5V73_20460	COG2195	Cleaves the N-terminal amino acid of tripeptides
J5V73_20465	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_20480	COG1376	ErfK ybiS ycfS ynhG family protein
J5V73_20485	COG4129	membrane
J5V73_20495	COG1126	abc transporter atp-binding protein
J5V73_20500	COG0765	amino acid transport
J5V73_20505	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
J5V73_20515	COG2816	NAD+ diphosphatase activity
J5V73_20520	COG2323	membrane
J5V73_20525	COG0772	Belongs to the SEDS family
J5V73_20530	COG0508	dehydrogenase complex catalyzes the overall conversion of
J5V73_20535	COG0022	dehydrogenase e1 component
J5V73_20540	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
J5V73_20545	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
J5V73_20550	COG3426	butyrate kinase activity
J5V73_20560	COG0280	phosphate acetyltransferase
J5V73_20565	COG3290	protein histidine kinase activity
J5V73_20565	COG3829	transcription factor binding
J5V73_20575	COG0584	glycerophosphoryl diester phosphodiesterase
J5V73_20580	COG3093	addiction module antidote protein HigA
J5V73_20620	COG0745	RESPONSE REGULATOR receiver
J5V73_20625	COG0750	zinc metalloprotease
J5V73_20630	COG0497	DNA recombination
J5V73_20635	COG1438	arginine binding
J5V73_20640	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
J5V73_20645	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
J5V73_20650	COG0142	geranyltranstransferase activity
J5V73_20655	COG1722	exodeoxyribonuclease VII activity
J5V73_20660	COG1570	exodeoxyribonuclease VII activity
J5V73_20665	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
J5V73_20670	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
J5V73_20675	COG1302	Protein conserved in bacteria
J5V73_20680	COG0439	Biotin carboxylase
J5V73_20685	COG0511	ligase activity, forming carbon-carbon bonds
J5V73_20730	COG3854	ATPases associated with a variety of cellular activities
J5V73_20750	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
J5V73_20755	COG0006	proline dipeptidase activity
J5V73_20760	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
J5V73_20770	COG3872	metal-dependent enzyme
J5V73_20780	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
J5V73_20785	COG1321	iron dependent repressor
J5V73_20815	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V73_20825	COG1609	Transcriptional regulator
J5V73_20835	COG2076	Multidrug Resistance protein
J5V73_20840	COG2076	Multidrug Resistance protein
J5V73_20870	COG1131	(ABC) transporter
J5V73_20875	COG1725	Transcriptional regulator
J5V73_20890	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V73_20895	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
J5V73_20900	COG0404	The glycine cleavage system catalyzes the degradation of glycine
J5V73_20905	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V73_20930	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
J5V73_20955	COG4970	Tfp pilus assembly protein FimT
J5V73_20965	COG1459	type II secretion system
J5V73_20970	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
J5V73_21025	COG1410	methionine synthase
J5V73_21025	COG0646	methionine synthase
J5V73_21030	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
J5V73_21030	COG0646	methionine synthase
J5V73_21035	COG0626	cystathionine gamma-synthase activity
J5V73_21040	COG0626	cystathionine gamma-synthase activity
J5V73_21060	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_21070	COG1940	carbohydrate kinase activity
J5V73_21075	COG4483	Protein conserved in bacteria
J5V73_21080	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
J5V73_21085	COG0267	Belongs to the bacterial ribosomal protein bL33 family
J5V73_21090	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
J5V73_21095	COG0704	Plays a role in the regulation of phosphate uptake
J5V73_21105	COG0581	inorganic phosphate transmembrane transporter activity
J5V73_21110	COG0573	inorganic phosphate transmembrane transporter activity
J5V73_21115	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
J5V73_21120	COG0768	penicillin binding
J5V73_21125	COG0477	Major facilitator Superfamily
J5V73_21130	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V73_21150	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
J5V73_21155	COG0735	belongs to the Fur family
J5V73_21160	COG1108	ABC-type Mn2 Zn2 transport systems permease components
J5V73_21165	COG1121	(ABC) transporter
J5V73_21170	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_21180	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
J5V73_21195	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
J5V73_21200	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
J5V73_21205	COG2384	SAM-dependent methyltransferase
J5V73_21210	COG2010	Cytochrome c
J5V73_21215	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
J5V73_21220	COG0358	DNA primase activity
J5V73_21230	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
J5V73_21235	COG0517	IMP dehydrogenase activity
J5V73_21240	COG1381	Involved in DNA repair and RecF pathway recombination
J5V73_21250	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
J5V73_21255	COG0295	cytidine deaminase activity
J5V73_21260	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
J5V73_21265	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
J5V73_21270	COG1480	7TM receptor with intracellular HD hydrolase
J5V73_21275	COG1702	phosphate starvation-inducible protein PhoH
J5V73_21290	COG1610	YqeY-like protein
J5V73_21295	COG0828	Belongs to the bacterial ribosomal protein bS21 family
J5V73_21300	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
J5V73_21305	COG1385	rRNA (uridine-N3-)-methyltransferase activity
J5V73_21315	COG0484	heat shock protein binding
J5V73_21320	COG0443	Heat shock 70 kDa protein
J5V73_21330	COG1420	regulation of RNA biosynthetic process
J5V73_21335	COG0635	Involved in the biosynthesis of porphyrin-containing compound
J5V73_21340	COG1733	regulation of RNA biosynthetic process
J5V73_21345	COG0481	GTPase activity
J5V73_21355	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
J5V73_21360	COG0268	Binds directly to 16S ribosomal RNA
J5V73_21365	COG1466	dna polymerase III delta subunit
J5V73_21375	COG0658	competence protein
J5V73_21375	COG2333	competence protein COMEC
J5V73_21380	COG2131	deaminase
J5V73_21385	COG1596	polysaccharide export
J5V73_21385	COG1555	photosystem II stabilization
J5V73_21390	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
J5V73_21395	COG2226	methyltransferase
J5V73_21400	COG0799	negative regulation of ribosome biogenesis
J5V73_21405	COG1713	HD superfamily hydrolase involved in NAD metabolism
J5V73_21410	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
J5V73_21415	COG1534	Rna-binding protein
J5V73_21420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
J5V73_21425	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
J5V73_21430	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
J5V73_21440	COG0688	phosphatidylethanolamine metabolic process
J5V73_21450	COG1595	DNA-templated transcription, initiation
J5V73_21455	COG2357	RelA SpoT domain protein
J5V73_21465	COG1785	Belongs to the alkaline phosphatase family
J5V73_21475	COG2267	carboxylic ester hydrolase activity
J5V73_21510	COG1404	Belongs to the peptidase S8 family
J5V73_21515	COG3186	Phenylalanine-4-hydroxylase
J5V73_21520	COG2154	pterin-4-alpha-carbinolamine dehydratase
J5V73_21525	COG2514	catechol 2,3-dioxygenase activity
J5V73_21530	COG2259	Doxx family
J5V73_21570	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_21580	COG1454	alcohol dehydrogenase
J5V73_21580	COG1012	belongs to the aldehyde dehydrogenase family
J5V73_21585	COG0626	cystathionine gamma-synthase activity
J5V73_21590	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
J5V73_21595	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
J5V73_21600	COG2226	methyltransferase
J5V73_21615	COG0768	penicillin binding
J5V73_21620	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
J5V73_21625	COG0572	uridine kinase
J5V73_21630	COG0826	peptidase U32
J5V73_21635	COG0826	peptidase U32
J5V73_21640	COG4122	O-methyltransferase activity
J5V73_21645	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
J5V73_21655	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
J5V73_21660	COG4472	Bacterial protein of unknown function (DUF965)
J5V73_21665	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
J5V73_21675	COG0628	permease
J5V73_21695	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
J5V73_21705	COG0482	sulfurtransferase activity
J5V73_21710	COG1104	cysteine desulfurase activity
J5V73_21715	COG1959	2 iron, 2 sulfur cluster binding
J5V73_21720	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
J5V73_21730	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J5V73_21735	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
J5V73_21755	COG1490	D-aminoacyl-tRNA deacylase activity
J5V73_21760	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
J5V73_21765	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
J5V73_21770	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
J5V73_21770	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
J5V73_21775	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
J5V73_21780	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V73_21780	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
J5V73_21790	COG2244	polysaccharide biosynthetic process
J5V73_21795	COG2323	membrane
J5V73_21805	COG1862	Preprotein translocase
J5V73_21810	COG0343	queuine tRNA-ribosyltransferase activity
J5V73_21815	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
J5V73_21825	COG2255	four-way junction helicase activity
J5V73_21830	COG0632	four-way junction helicase activity
J5V73_21835	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
J5V73_21860	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
J5V73_21865	COG0157	Belongs to the NadC ModD family
J5V73_21870	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
J5V73_21875	COG1104	cysteine desulfurase activity
J5V73_21880	COG1827	regulation of RNA biosynthetic process
J5V73_21885	COG2258	MOSC domain
J5V73_21890	COG0077	Prephenate dehydratase
J5V73_21895	COG0577	efflux transmembrane transporter activity
J5V73_21900	COG0577	efflux transmembrane transporter activity
J5V73_21905	COG1136	(ABC) transporter
J5V73_21910	COG5002	protein histidine kinase activity
J5V73_21915	COG0745	RESPONSE REGULATOR receiver
J5V73_21920	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
J5V73_21925	COG3290	protein histidine kinase activity
J5V73_21935	COG2868	ribosomal protein
J5V73_21945	COG1530	ribonuclease E activity
J5V73_21950	COG1994	Peptidase M50
J5V73_21955	COG0739	heme binding
J5V73_21960	COG2894	cell division
J5V73_21965	COG0850	regulation of cytokinetic process
J5V73_21980	COG1077	Cell shape determining protein MreB Mrl
J5V73_21985	COG2003	Belongs to the UPF0758 family
J5V73_21990	COG0424	maF-like protein
J5V73_22000	COG0285	dihydrofolate synthase activity
J5V73_22015	COG1388	LysM domain
J5V73_22020	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
J5V73_22025	COG0113	porphobilinogen synthase activity
J5V73_22030	COG1587	Uroporphyrinogen-III synthase
J5V73_22035	COG0181	hydroxymethylbilane synthase activity
J5V73_22040	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
J5V73_22045	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
J5V73_22050	COG1846	Transcriptional regulator
J5V73_22055	COG1764	response to oxidative stress
J5V73_22060	COG0218	Necessary for normal cell division and for the maintenance of normal septation
J5V73_22070	COG0470	DNA polymerase III
J5V73_22070	COG1067	ATP-dependent peptidase activity
J5V73_22080	COG0544	peptidyl-prolyl cis-trans isomerase activity
J5V73_22130	COG0622	Phosphoesterase
J5V73_22140	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
J5V73_22145	COG5401	PFAM Sporulation and spore germination
J5V73_22155	COG2197	response regulator
J5V73_22160	COG2233	PERMEase
J5V73_22165	COG0402	S-adenosylhomocysteine deaminase activity
J5V73_22170	COG1983	PspC domain protein
J5V73_22175	COG1396	sequence-specific DNA binding
J5V73_22180	COG0697	spore germination
J5V73_22190	COG1959	2 iron, 2 sulfur cluster binding
J5V73_22195	COG1668	transmembrane transport
J5V73_22200	COG4152	abc transporter atp-binding protein
J5V73_22205	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
J5V73_22210	COG1360	Flagellar Motor Protein
J5V73_22215	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
J5V73_22220	COG1876	peptidase activity
J5V73_22225	COG0824	Thioesterase
J5V73_22230	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
J5V73_22235	COG1053	succinate dehydrogenase
J5V73_22240	COG2009	succinate dehydrogenase
J5V73_22245	COG1719	4-vinyl reductase, 4VR
J5V73_22250	COG0322	excinuclease ABC activity
J5V73_22255	COG3118	belongs to the thioredoxin family
J5V73_22260	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
J5V73_22265	COG2086	electron transfer activity
J5V73_22270	COG1024	Enoyl-CoA hydratase
J5V73_22275	COG1309	transcriptional regulator
J5V73_22280	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_22295	COG2318	DinB family
J5V73_22325	COG1131	(ABC) transporter
J5V73_22330	COG2205	protein histidine kinase activity
J5V73_22335	COG0745	RESPONSE REGULATOR receiver
J5V73_22345	COG4895	conserved protein (DUF2196)
J5V73_22350	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
J5V73_22360	COG4509	Sortase family
J5V73_22365	COG1120	ATPase activity
J5V73_22380	COG5386	Cell surface protein
J5V73_22385	COG5386	Cell surface protein
J5V73_22390	COG1114	Component of the transport system for branched-chain amino acids
J5V73_22400	COG1193	negative regulation of DNA recombination
J5V73_22405	COG1796	DNA polymerase
J5V73_22405	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
J5V73_22410	COG1286	toxin biosynthetic process
J5V73_22415	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
J5V73_22420	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
J5V73_22455	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
J5V73_22460	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
J5V73_22470	COG1418	mRNA catabolic process
J5V73_22490	COG2814	Major facilitator Superfamily
J5V73_22495	COG1566	PFAM secretion protein HlyD family protein
J5V73_22500	COG1309	transcriptional regulator
J5V73_22505	COG1363	Peptidase, m42
J5V73_22515	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
J5V73_22530	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
J5V73_22540	COG1484	DNA-dependent DNA replication
J5V73_22545	COG3611	Membrane attachment protein
J5V73_22550	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
J5V73_22555	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
J5V73_22560	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V73_22565	COG0237	dephospho-CoA kinase activity
J5V73_22570	COG1971	Probably functions as a manganese efflux pump
J5V73_22580	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V73_22580	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
J5V73_22585	COG5002	protein histidine kinase activity
J5V73_22590	COG0745	RESPONSE REGULATOR receiver
J5V73_22605	COG0039	L-malate dehydrogenase activity
J5V73_22610	COG0538	isocitrate dehydrogenase activity
J5V73_22615	COG0372	Belongs to the citrate synthase family
J5V73_22625	COG0628	permease
J5V73_22630	COG3030	protein affecting phage T7 exclusion by the F plasmid
J5V73_22640	COG0205	6-phosphofructokinase activity
J5V73_22650	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
J5V73_22655	COG1725	Transcriptional regulator
J5V73_22660	COG0281	malic enzyme
J5V73_22665	COG0587	DNA-directed DNA polymerase activity
J5V73_22680	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
J5V73_22695	COG4109	DRTGG domain
J5V73_22705	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
J5V73_22710	COG0006	proline dipeptidase activity
J5V73_22740	COG0662	Cupin 2, conserved barrel domain protein
J5V73_22750	COG1476	TRANSCRIPTIONal
J5V73_22765	COG1028	Short-chain dehydrogenase reductase Sdr
J5V73_22770	COG0589	response to stress
J5V73_22790	COG0165	Argininosuccinate lyase
J5V73_22795	COG0137	argininosuccinate synthase activity
J5V73_22810	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_22830	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
J5V73_22835	COG0827	DNA restriction-modification system
J5V73_22840	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
J5V73_22845	COG3874	Sporulation protein YtfJ
J5V73_22860	COG1574	metal-dependent hydrolase with the TIM-barrel fold
J5V73_22870	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V73_22885	COG1104	cysteine desulfurase activity
J5V73_22890	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
J5V73_22905	COG1309	transcriptional regulator
J5V73_22910	COG1956	GAF domain-containing protein
J5V73_22915	COG0626	cystathionine gamma-synthase activity
J5V73_22920	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
J5V73_22950	COG0556	nucleotide-excision repair
J5V73_22975	COG1595	DNA-templated transcription, initiation
J5V73_22985	COG0110	maltose O-acetyltransferase activity
J5V73_22995	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
J5V73_23000	COG0454	-acetyltransferase
J5V73_23005	COG0517	IMP dehydrogenase activity
J5V73_23010	COG0123	including yeast histone deacetylase and acetoin utilization protein
J5V73_23045	COG0745	RESPONSE REGULATOR receiver
J5V73_23050	COG5002	protein histidine kinase activity
J5V73_23055	COG0666	response to abiotic stimulus
J5V73_23065	COG1970	mechanosensitive ion channel activity
J5V73_23085	COG1609	Transcriptional regulator
J5V73_23095	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
J5V73_23095	COG1605	Chorismate mutase
J5V73_23100	COG4851	CamS sex pheromone cAM373 precursor
J5V73_23105	COG3118	belongs to the thioredoxin family
J5V73_23115	COG2309	aminopeptidase activity
J5V73_23130	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_23135	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
J5V73_23145	COG1674	ftsk spoiiie
J5V73_23160	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V73_23165	COG4848	Belongs to the UPF0354 family
J5V73_23170	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_23175	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
J5V73_23180	COG1363	Peptidase, m42
J5V73_23190	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_23195	COG0220	tRNA (guanine-N7-)-methyltransferase activity
J5V73_23205	COG0510	thiamine kinase activity
J5V73_23210	COG1523	belongs to the glycosyl hydrolase 13 family
J5V73_23220	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
J5V73_23225	COG1349	DNA-binding transcription factor activity
J5V73_23230	COG1187	pseudouridine synthase activity
J5V73_23235	COG2244	polysaccharide biosynthetic process
J5V73_23240	COG2081	HI0933 family
J5V73_23245	COG2814	Major facilitator Superfamily
J5V73_23255	COG3832	glyoxalase III activity
J5V73_23275	COG1329	Transcriptional regulator
J5V73_23300	COG0314	molybdopterin synthase activity
J5V73_23305	COG1763	Mo-molybdopterin cofactor biosynthetic process
J5V73_23310	COG0303	'Molybdopterin
J5V73_23315	COG0315	cyclic pyranopterin monophosphate synthase activity
J5V73_23320	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
J5V73_23325	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
J5V73_23345	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
J5V73_23355	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
J5V73_23395	COG0495	leucyl-tRNA aminoacylation
J5V73_23400	COG2814	Major facilitator Superfamily
J5V73_23405	COG0475	glutathione-regulated potassium exporter activity
J5V73_23410	COG0490	domain, Protein
J5V73_23415	COG0582	viral genome integration into host DNA
J5V73_23425	COG1136	(ABC) transporter
J5V73_23445	COG1242	4 iron, 4 sulfur cluster binding
J5V73_23450	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
J5V73_23455	COG1794	racemase activity, acting on amino acids and derivatives
J5V73_23470	COG2267	carboxylic ester hydrolase activity
J5V73_23475	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
J5V73_23480	COG0671	phosphoesterase, PA-phosphatase related
J5V73_23485	COG0438	transferase activity, transferring glycosyl groups
J5V73_23495	COG0521	Mo-molybdopterin cofactor biosynthetic process
J5V73_23520	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
J5V73_23525	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
J5V73_23560	COG5002	protein histidine kinase activity
J5V73_23565	COG3852	Histidine kinase
J5V73_23570	COG0753	catalase activity
J5V73_23575	COG2267	carboxylic ester hydrolase activity
J5V73_23580	COG1368	sulfuric ester hydrolase activity
J5V73_23590	COG4895	conserved protein (DUF2196)
J5V73_23605	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
J5V73_23610	COG1116	anion transmembrane transporter activity
J5V73_23615	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
J5V73_23640	COG0577	efflux transmembrane transporter activity
J5V73_23645	COG1136	(ABC) transporter
J5V73_23650	COG0745	RESPONSE REGULATOR receiver
J5V73_23655	COG5002	protein histidine kinase activity
J5V73_23660	COG0494	nUDIX hydrolase
J5V73_23700	COG1854	S-ribosylhomocysteine lyase activity
J5V73_23710	COG0288	reversible hydration of carbon dioxide
J5V73_23715	COG1271	oxidase subunit
J5V73_23720	COG1294	oxidase, subunit
J5V73_23740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_23760	COG1842	Phage shock protein A
J5V73_23785	COG3859	Proton-coupled thiamine transporter YuaJ
J5V73_23790	COG5002	protein histidine kinase activity
J5V73_23795	COG0745	RESPONSE REGULATOR receiver
J5V73_23820	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
J5V73_23825	COG1597	lipid kinase activity
J5V73_23870	COG0577	efflux transmembrane transporter activity
J5V73_23875	COG1136	(ABC) transporter
J5V73_23880	COG2207	Transcriptional regulator
J5V73_23880	COG3708	Transcriptional regulator
J5V73_23890	COG1131	(ABC) transporter
J5V73_23895	COG5658	integral membrane protein
J5V73_23900	COG0640	Transcriptional regulator
J5V73_23905	COG0745	RESPONSE REGULATOR receiver
J5V73_23910	COG2205	protein histidine kinase activity
J5V73_23915	COG0577	efflux transmembrane transporter activity
J5V73_23920	COG0577	efflux transmembrane transporter activity
J5V73_23925	COG1136	(ABC) transporter
J5V73_23930	COG0577	efflux transmembrane transporter activity
J5V73_23945	COG2188	Transcriptional regulator
J5V73_23965	COG3964	amidohydrolase
J5V73_23990	COG4948	Mandelate Racemase Muconate Lactonizing
J5V73_23995	COG0318	PFAM AMP-dependent synthetase and ligase
J5V73_24000	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
J5V73_24005	COG0596	Alpha beta hydrolase
J5V73_24010	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
J5V73_24015	COG1169	isochorismate synthase
J5V73_24020	COG1575	Belongs to the MenA family. Type 1 subfamily
J5V73_24025	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
J5V73_24030	COG1278	Cold shock
J5V73_24050	COG0058	SHG alpha-glucan phosphorylase activity
J5V73_24060	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V73_24065	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
J5V73_24070	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
J5V73_24215	COG1285	pathogenesis
J5V73_24220	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
J5V73_24230	COG0166	Belongs to the GPI family
J5V73_24235	COG2155	Conserved Protein
J5V73_24240	COG1098	S1 RNA binding domain
J5V73_24245	COG0436	Aminotransferase
J5V73_24250	COG1522	sequence-specific DNA binding
J5V73_24255	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
J5V73_24260	COG2267	carboxylic ester hydrolase activity
J5V73_24270	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
J5V73_24290	COG5018	Exonuclease
J5V73_24295	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V73_24315	COG2050	protein possibly involved in aromatic compounds catabolism
J5V73_24325	COG1268	BioY protein
J5V73_24330	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V73_24335	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
J5V73_24345	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
J5V73_24350	COG3584	3D domain protein
J5V73_24365	COG1252	NADH dehydrogenase
J5V73_24370	COG0492	ferredoxin-NADP+ reductase activity
J5V73_24375	COG3708	Transcriptional regulator
J5V73_24390	COG1683	Conserved Protein
J5V73_24405	COG0316	Belongs to the HesB IscA family
J5V73_24410	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
J5V73_24415	COG4844	belongs to the
J5V73_24420	COG1252	NADH dehydrogenase
J5V73_24430	COG0390	transport system, permease component
J5V73_24435	COG2824	Alkylphosphonate utilization operon protein PhnA
J5V73_24480	COG4837	Protein of unknown function (DUF1462)
J5V73_24485	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
J5V73_24495	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
J5V73_24500	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
J5V73_24510	COG0647	UMP catabolic process
J5V73_24520	COG2445	Protein of unknown function DUF86
J5V73_24525	COG1494	fructose-1,6-bisphosphatase
J5V73_24540	COG4470	Protein conserved in bacteria
J5V73_24550	COG0789	Transcriptional regulator
J5V73_24555	COG4377	Putative membrane peptidase family (DUF2324)
J5V73_24575	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
J5V73_24580	COG0739	heme binding
J5V73_24590	COG3377	Domain of unknown function (DUF1805)
J5V73_24595	COG0737	Belongs to the 5'-nucleotidase family
J5V73_24600	COG0719	Fe-S assembly protein
J5V73_24605	COG0822	iron-sulfur transferase activity
J5V73_24610	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
J5V73_24615	COG0719	Fe-S assembly protein
J5V73_24620	COG0396	ATPase activity
J5V73_24625	COG1464	Belongs to the NlpA lipoprotein family
J5V73_24630	COG1464	Belongs to the NlpA lipoprotein family
J5V73_24635	COG2011	ABC-type metal ion transport system permease component
J5V73_24640	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
J5V73_24650	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
J5V73_24655	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
J5V73_24660	COG0509	glycine decarboxylation via glycine cleavage system
J5V73_24665	COG1393	Belongs to the ArsC family
J5V73_24700	COG1309	transcriptional regulator
J5V73_24705	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
J5V73_24710	COG1960	acyl-CoA dehydrogenase activity
J5V73_24715	COG0183	Belongs to the thiolase family
J5V73_24720	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V73_24720	COG1024	Enoyl-CoA hydratase
J5V73_24730	COG1686	Belongs to the peptidase S11 family
J5V73_24735	COG0506	proline dehydrogenase activity
J5V73_24745	COG0011	TIGRFAM Protein of
J5V73_24750	COG0840	transmembrane signaling receptor activity
J5V73_24765	COG2814	Major facilitator Superfamily
J5V73_24770	COG0531	amino acid
J5V73_24795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
J5V73_24910	COG0586	Pfam SNARE associated Golgi protein
J5V73_24920	COG1376	ErfK ybiS ycfS ynhG family protein
J5V73_24925	COG0745	RESPONSE REGULATOR receiver
J5V73_24930	COG5002	protein histidine kinase activity
J5V73_24940	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
J5V73_24950	COG0840	transmembrane signaling receptor activity
J5V73_24955	COG0840	transmembrane signaling receptor activity
J5V73_24960	COG2151	metal-sulfur cluster biosynthetic enzyme
J5V73_24965	COG3227	Zinc metalloprotease (Elastase)
J5V73_24970	COG1741	Belongs to the pirin family
J5V73_24985	COG0475	glutathione-regulated potassium exporter activity
J5V73_24990	COG0490	domain, Protein
J5V73_24995	COG1115	amino acid carrier protein
J5V73_25000	COG0783	Belongs to the Dps family
J5V73_25010	COG2318	DinB family
J5V73_25015	COG1611	Belongs to the LOG family
J5V73_25025	COG1528	Iron-storage protein
J5V73_25030	COG2311	Membrane
J5V73_25040	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_25045	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_25050	COG1115	amino acid carrier protein
J5V73_25055	COG1115	amino acid carrier protein
J5V73_25060	COG2910	NAD(P)H-binding
J5V73_25070	COG0656	L-ascorbic acid biosynthetic process
J5V73_25075	COG2814	Major facilitator Superfamily
J5V73_25080	COG1733	regulation of RNA biosynthetic process
J5V73_25090	COG1252	NADH dehydrogenase
J5V73_25120	COG0840	transmembrane signaling receptor activity
J5V73_25120	COG3290	protein histidine kinase activity
J5V73_25130	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
J5V73_25155	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
J5V73_25175	COG1522	sequence-specific DNA binding
J5V73_25180	COG0288	reversible hydration of carbon dioxide
J5V73_25185	COG1513	Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide
J5V73_25190	COG2233	PERMEase
J5V73_25235	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
J5V73_25240	COG0557	exoribonuclease II activity
J5V73_25245	COG1647	Serine aminopeptidase, S33
J5V73_25250	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
J5V73_25255	COG1346	cytolysis
J5V73_25270	COG0148	phosphopyruvate hydratase activity
J5V73_25280	COG0149	triose-phosphate isomerase activity
J5V73_25285	COG0126	phosphoglycerate kinase activity
J5V73_25290	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
J5V73_25305	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
J5V73_25330	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
J5V73_25345	COG2323	membrane
J5V73_25355	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
J5V73_25360	COG1481	regulation of sporulation
J5V73_25365	COG0391	Required for morphogenesis under gluconeogenic growth conditions
J5V73_25370	COG1660	Displays ATPase and GTPase activities
J5V73_25375	COG1051	belongs to the nudix hydrolase family
J5V73_25385	COG0492	ferredoxin-NADP+ reductase activity
J5V73_25390	COG0457	Tetratricopeptide repeat
J5V73_25395	COG0110	maltose O-acetyltransferase activity
J5V73_25400	COG0546	phosphoglycolate phosphatase activity
J5V73_25405	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
J5V73_25410	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
J5V73_25415	COG1950	PFAM Membrane protein of
J5V73_25425	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
J5V73_25445	COG0789	Transcriptional regulator
J5V73_25475	COG0583	DNA-binding transcription factor activity
J5V73_25480	COG0789	Transcriptional regulator
J5V73_25485	COG0655	NAD(P)H dehydrogenase (quinone) activity
J5V73_25490	COG0488	(ABC) transporter
J5V73_25500	COG1132	(ABC) transporter
J5V73_25505	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V73_25510	COG0793	Belongs to the peptidase S41A family
J5V73_25510	COG3409	Peptidoglycan-binding domain 1 protein
J5V73_25515	COG2177	Part of the ABC transporter FtsEX involved in
J5V73_25520	COG2884	Cell division ATP-binding protein ftsE
J5V73_25545	COG1131	(ABC) transporter
J5V73_25575	COG1278	Cold shock
J5V73_25580	COG1040	competence protein
J5V73_25585	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
J5V73_25590	COG1388	LysM domain
J5V73_25590	COG0791	NLP P60 protein
J5V73_25595	COG1733	regulation of RNA biosynthetic process
J5V73_25600	COG1307	EDD domain protein, DegV family
J5V73_25605	COG1739	Uncharacterized protein family UPF0029
J5V73_25610	COG1316	TRANSCRIPTIONal
J5V73_25615	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
J5V73_25620	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V73_25625	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
J5V73_25635	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
J5V73_25635	COG3933	PFAM sigma-54 factor interaction domain-containing protein
J5V73_25660	COG1486	melibiose metabolic process
J5V73_25665	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V73_25670	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_25675	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_25690	COG1447	Phosphotransferase system cellobiose-specific component IIA
J5V73_25700	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
J5V73_25705	COG1301	dicarboxylic acid transport
J5V73_25725	COG1511	domain protein
J5V73_25730	COG0583	DNA-binding transcription factor activity
J5V73_25735	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
J5V73_25745	COG1271	oxidase subunit
J5V73_25750	COG1294	oxidase, subunit
J5V73_25755	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
J5V73_25760	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
J5V73_25765	COG1620	l-lactate permease
J5V73_25775	COG2389	metal-binding protein
J5V73_25785	COG1368	sulfuric ester hydrolase activity
J5V73_25795	COG0791	NLP P60 protein
J5V73_25795	COG1388	LysM domain
J5V73_25800	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
J5V73_25810	COG1215	transferase activity, transferring glycosyl groups
J5V73_25815	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V73_25820	COG3584	3D domain protein
J5V73_25820	COG1388	LysM domain
J5V73_25830	COG4715	Zinc finger, swim domain protein
J5V73_25835	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
J5V73_25875	COG0577	efflux transmembrane transporter activity
J5V73_25880	COG1136	(ABC) transporter
J5V73_25900	COG2271	Major facilitator Superfamily
J5V73_25915	COG3850	Histidine kinase
J5V73_25915	COG5002	protein histidine kinase activity
J5V73_25920	COG0745	RESPONSE REGULATOR receiver
J5V73_25930	COG1316	TRANSCRIPTIONal
J5V73_25935	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J5V73_25940	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
J5V73_25945	COG1215	transferase activity, transferring glycosyl groups
J5V73_25950	COG0438	transferase activity, transferring glycosyl groups
J5V73_25970	COG1210	Utp--glucose-1-phosphate uridylyltransferase
J5V73_25975	COG4464	protein tyrosine phosphatase activity
J5V73_25980	COG0489	protein tyrosine kinase activity
J5V73_25985	COG3944	biosynthesis protein
J5V73_25990	COG0489	protein tyrosine kinase activity
J5V73_26005	COG1609	Transcriptional regulator
J5V73_26015	COG0739	heme binding
J5V73_26030	COG3279	Response regulator of the LytR AlgR family
J5V73_26035	COG2385	sporulation resulting in formation of a cellular spore
J5V73_26050	COG4836	Membrane
J5V73_26055	COG1007	ATP synthesis coupled electron transport
J5V73_26060	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V73_26065	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
J5V73_26070	COG0713	ATP synthesis coupled electron transport
J5V73_26075	COG0839	Belongs to the complex I subunit 6 family
J5V73_26085	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
J5V73_26090	COG0649	NAD binding
J5V73_26095	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V73_26100	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V73_26105	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
J5V73_26110	COG5001	Diguanylate cyclase
J5V73_26110	COG3300	MHYT domain
J5V73_26125	COG0355	proton-transporting ATP synthase activity, rotational mechanism
J5V73_26130	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
J5V73_26145	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
J5V73_26150	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
J5V73_26160	COG0356	it plays a direct role in the translocation of protons across the membrane
J5V73_26195	COG0698	ribose 5-phosphate isomerase
J5V73_26205	COG2190	(PTS) system
J5V73_26210	COG2259	Doxx family
J5V73_26215	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
J5V73_26225	COG1971	Probably functions as a manganese efflux pump
J5V73_26230	COG0009	L-threonylcarbamoyladenylate synthase
J5V73_26245	COG2890	protein-(glutamine-N5) methyltransferase activity
J5V73_26250	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
J5V73_26255	COG1435	thymidine kinase activity
J5V73_26265	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
J5V73_26270	COG1494	fructose-1,6-bisphosphatase
J5V73_26290	COG4821	SIS domain
J5V73_26295	COG0504	CTP synthase activity
J5V73_26300	COG3343	RNA polymerase activity
J5V73_26310	COG1960	acyl-CoA dehydrogenase activity
J5V73_26315	COG1960	acyl-CoA dehydrogenase activity
J5V73_26320	COG1250	3-hydroxyacyl-CoA dehydrogenase
J5V73_26325	COG0183	Belongs to the thiolase family
J5V73_26330	COG0247	lactate metabolic process
J5V73_26330	COG2181	nitrate reductase activity
J5V73_26335	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
J5V73_26340	COG4294	response to UV
J5V73_26345	COG3300	MHYT domain
J5V73_26345	COG5001	Diguanylate cyclase
J5V73_26360	COG3227	Zinc metalloprotease (Elastase)
J5V73_26365	COG2197	response regulator
J5V73_26370	COG4585	Histidine kinase
J5V73_26375	COG0842	Transport permease protein
J5V73_26380	COG1131	(ABC) transporter
J5V73_26385	COG0024	Methionine aminopeptidase
J5V73_26390	COG2234	aminopeptidase activity
J5V73_26410	COG4506	Protein conserved in bacteria
J5V73_26415	COG1619	proteins homologs of microcin C7 resistance protein MccF
J5V73_26430	COG0010	Belongs to the arginase family
J5V73_26435	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
J5V73_26440	COG2814	Major facilitator Superfamily
J5V73_26445	COG0789	Transcriptional regulator
J5V73_26450	COG0584	glycerophosphoryl diester phosphodiesterase
J5V73_26455	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
J5V73_26465	COG1994	Peptidase M50
J5V73_26475	COG1078	dGTPase activity
J5V73_26480	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
J5V73_26485	COG1120	ATPase activity
J5V73_26490	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_26495	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
J5V73_26500	COG4844	belongs to the
J5V73_26515	COG0280	phosphate acetyltransferase
J5V73_26520	COG3253	May function as heme-dependent peroxidase
J5V73_26530	COG3773	Cell wall hydrolase
J5V73_26540	COG2363	Small membrane protein
J5V73_26555	COG2233	PERMEase
J5V73_26560	COG0561	phosphatase activity
J5V73_26565	COG2814	Major facilitator Superfamily
J5V73_26570	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
J5V73_26575	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V73_26580	COG1131	(ABC) transporter
J5V73_26585	COG2755	lipolytic protein G-D-S-L family
J5V73_26590	COG1609	Transcriptional regulator
J5V73_26600	COG0460	homoserine dehydrogenase
J5V73_26605	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
J5V73_26610	COG2873	o-acetylhomoserine
J5V73_26620	COG1011	Hydrolase
J5V73_26625	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
J5V73_26635	COG2197	response regulator
J5V73_26640	COG4585	Histidine kinase
J5V73_26640	COG2203	Gaf domain
J5V73_26645	COG0351	phosphomethylpyrimidine kinase
J5V73_26650	COG3706	GGDEF domain
J5V73_26655	COG2879	small protein
J5V73_26660	COG1966	Carbon starvation protein
J5V73_26665	COG3279	Response regulator of the LytR AlgR family
J5V73_26670	COG0477	Major facilitator Superfamily
J5V73_26695	COG0840	transmembrane signaling receptor activity
J5V73_26705	COG1607	acyl-coa hydrolase
J5V73_26710	COG1216	Glycosyl transferase, family 2
J5V73_26725	COG1216	Glycosyl transferase, family 2
J5V73_26735	COG0488	(ABC) transporter
J5V73_26740	COG1309	transcriptional regulator
J5V73_26745	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
J5V73_26750	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V73_26750	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
J5V73_26755	COG0628	permease
J5V73_26765	COG1380	Effector of murein hydrolase LrgA
J5V73_26770	COG3279	Response regulator of the LytR AlgR family
J5V73_26775	COG3275	phosphorelay sensor kinase activity
J5V73_26780	COG2814	Major facilitator Superfamily
J5V73_26785	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
J5V73_26790	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
J5V73_26795	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
J5V73_26845	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
J5V73_26850	COG1272	protein, Hemolysin III
J5V73_26880	COG1164	Oligoendopeptidase f
J5V73_26890	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
J5V73_26900	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
J5V73_26905	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
J5V73_26910	COG4853	Protein conserved in bacteria
J5V73_26920	COG5002	protein histidine kinase activity
J5V73_26925	COG0745	RESPONSE REGULATOR receiver
J5V73_26955	COG0305	Participates in initiation and elongation during chromosome replication
J5V73_26960	COG0359	binds to the 23S rRNA
J5V73_26965	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
J5V73_26970	COG4241	membrane
J5V73_26980	COG0629	single-stranded DNA binding
J5V73_26985	COG0360	Binds together with S18 to 16S ribosomal RNA
J5V73_26990	COG0012	GTP binding
J5V73_26995	COG4481	Protein conserved in bacteria
J5V73_27000	COG0668	transmembrane transport
J5V73_27010	COG1475	DNA binding
J5V73_27015	COG1192	Involved in chromosome partitioning
J5V73_27020	COG1475	DNA binding
J5V73_27030	COG0445	tRNA wobble uridine modification
J5V73_27035	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
J5V73_27040	COG1847	R3H domain protein
J5V73_27045	COG0706	membrane insertase activity
J5V73_27050	COG0594	ribonuclease P activity
J5V73_27055	COG0230	Belongs to the bacterial ribosomal protein bL34 family
J5V73_27100	COG2508	Transcriptional regulator
J5V73_27100	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
J5V73_27105	COG0686	Belongs to the AlaDH PNT family
J5V73_27135	COG0745	RESPONSE REGULATOR receiver
J5V73_27145	COG0739	heme binding
J5V73_27185	COG1073	alpha beta
J5V73_27190	COG2732	(Barnase) inhibitor
J5V73_27255	COG0531	amino acid
J5V73_27260	COG3338	carbonate dehydratase activity
J5V73_27270	COG5002	protein histidine kinase activity
J5V73_27300	COG5002	protein histidine kinase activity
J5V73_27315	COG3227	Zinc metalloprotease (Elastase)
J5V73_27350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
J5V73_27360	COG2707	UPF0756 membrane protein
J5V73_27370	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
J5V73_27385	COG1136	(ABC) transporter
J5V73_27395	COG5002	protein histidine kinase activity
J5V73_27400	COG3842	ATPase activity
J5V73_27425	COG0395	ABC-type sugar transport system, permease component
J5V73_27430	COG1175	transmembrane transport
J5V73_27435	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
J5V73_27440	COG1279	arginine transmembrane transporter activity
J5V73_27460	COG0745	RESPONSE REGULATOR receiver
J5V73_27475	COG1696	Membrane protein involved in D-alanine export
J5V73_27495	COG3739	integral membrane protein
J5V73_27500	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
J5V73_27505	COG1131	(ABC) transporter
J5V73_27515	COG3655	Transcriptional regulator
J5V73_27550	COG0640	Transcriptional regulator
J5V73_27575	COG0823	Involved in the tonB-independent uptake of proteins
J5V73_27580	COG5002	protein histidine kinase activity
J5V73_27585	COG0745	RESPONSE REGULATOR receiver
J5V73_27640	COG2814	Major facilitator Superfamily
J5V73_27645	COG0577	efflux transmembrane transporter activity
J5V73_27645	COG1136	(ABC) transporter
J5V73_27655	COG2205	protein histidine kinase activity
J5V73_27660	COG0745	RESPONSE REGULATOR receiver
J5V73_27680	COG1136	(ABC) transporter
J5V73_27685	COG0577	efflux transmembrane transporter activity
J5V73_27705	COG0659	secondary active sulfate transmembrane transporter activity
J5V73_27720	COG2824	Alkylphosphonate utilization operon protein PhnA
J5V73_27765	COG3493	citrate carrier protein
J5V73_27770	COG4565	transcriptional regulatory protein
J5V73_27775	COG3290	protein histidine kinase activity
J5V73_27820	COG0753	catalase activity
J5V73_27845	COG0825	malonyl-CoA metabolic process
J5V73_27890	COG2124	cytochrome p450
J5V73_27990	COG2868	ribosomal protein