A361_00005 SM00382 ATPases associated with a variety of cellular activities A361_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain A361_00010 SM00480 DNA polymerase III beta subunit A361_00030 SM00387 Histidine kinase-like ATPases A361_00030 SM00433 TopoisomeraseII A361_00035 SM00434 DNA Topoisomerase IV A361_00040 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_00080 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_00080 SM01240 A361_00080 A361_00085 SM00936 Penicillin-binding protein 5, C-terminal domain A361_00125 SM00257 Lysin motif A361_00125 SM00636 A361_00125 A361_00145 SM00382 ATPases associated with a variety of cellular activities A361_00155 SM00493 A361_00155 A361_00250 SM00966 SpoVT / AbrB like domain A361_00270 SM01208 A361_00270 A361_00275 SM00493 A361_00275 A361_00280 SM00650 Ribosomal RNA adenine dimethylases A361_00325 SM01400 A361_00325 A361_00345 SM00487 DEAD-like helicases superfamily A361_00345 SM00490 helicase superfamily c-terminal domain A361_00345 SM00982 A361_00345 A361_00345 SM01058 CarD-like/TRCF domain A361_00350 SM00966 SpoVT / AbrB like domain A361_00365 SM00363 S4 RNA-binding domain A361_00385 SM00316 Ribosomal protein S1-like RNA-binding domain A361_00400 SM00331 Sigma factor PP2C-like phosphatases A361_00400 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A361_00410 SM00220 Serine/Threonine protein kinases, catalytic domain A361_00415 SM00977 TilS substrate C-terminal domain A361_00425 SM00382 ATPases associated with a variety of cellular activities A361_00470 SM00905 Dihydroneopterin aldolase A361_00480 SM00530 Helix-turn-helix XRE-family like proteins A361_00590 SM00382 ATPases associated with a variety of cellular activities A361_00590 SM01086 C-terminal, D2-small domain, of ClpB protein A361_00595 SM00382 ATPases associated with a variety of cellular activities A361_00605 SM00670 Large family of predicted nucleotide-binding domains A361_00630 SM00840 A361_00630 A361_00635 SM00535 Ribonuclease III family A361_00640 SM00967 RNA 2'-O ribose methyltransferase substrate binding A361_00650 SM00421 helix_turn_helix, Lux Regulon A361_00665 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. A361_00665 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A361_00670 SM00649 Ribosomal protein L11/L12 A361_00700 SM00663 RNA polymerase I subunit A N-terminus A361_00720 SM00838 Elongation factor G C-terminus A361_00720 SM00889 Elongation factor G, domain IV A361_00730 SM01403 A361_00730 A361_00750 SM01382 A361_00750 A361_00750 SM01383 A361_00750 A361_00765 SM00322 K homology RNA-binding domain A361_00785 SM01374 A361_00785 A361_00790 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. A361_00855 SM00316 Ribosomal protein S1-like RNA-binding domain A361_00875 SM00662 RNA polymerases D A361_00885 SM00382 ATPases associated with a variety of cellular activities A361_00890 SM00382 ATPases associated with a variety of cellular activities A361_00920 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A361_00935 SM00646 A361_00935 A361_00950 SM01251 A361_00950 A361_01070 SM00487 DEAD-like helicases superfamily A361_01070 SM00490 helicase superfamily c-terminal domain A361_01135 SM00382 ATPases associated with a variety of cellular activities A361_01185 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A361_01210 SM00382 ATPases associated with a variety of cellular activities A361_01225 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_01235 SM00382 ATPases associated with a variety of cellular activities A361_01270 SM00836 DALR anticodon binding domain A361_01270 SM01016 Arginyl tRNA synthetase N terminal dom A361_01295 SM00382 ATPases associated with a variety of cellular activities A361_01325 SM00855 Phosphoglycerate mutase family A361_01350 SM00855 Phosphoglycerate mutase family A361_01400 SM00487 DEAD-like helicases superfamily A361_01400 SM00490 helicase superfamily c-terminal domain A361_01435 SM01005 Alanine racemase, C-terminal domain A361_01465 SM00331 Sigma factor PP2C-like phosphatases A361_01485 SM00331 Sigma factor PP2C-like phosphatases A361_01490 SM00316 Ribosomal protein S1-like RNA-binding domain A361_01490 SM00732 Likely ribonuclease with RNase H fold. A361_01495 SM00731 SprT homologues. A361_01600 SM00382 ATPases associated with a variety of cellular activities A361_01610 SM00881 CoA binding domain A361_01625 SM00883 Chaperonin 10 Kd subunit A361_01650 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_01690 SM00631 A361_01690 A361_01775 SM00460 Transglutaminase/protease-like homologues A361_01800 SM00460 Transglutaminase/protease-like homologues A361_01815 SM01061 CAT RNA binding domain A361_01850 SM01001 AIR carboxylase A361_01860 SM00998 Adenylosuccinate lyase C-terminus A361_01875 SM01211 A361_01875 A361_01900 SM00798 AICARFT/IMPCHase bienzyme A361_01900 SM00851 MGS-like domain A361_01905 SM01209 A361_01905 A361_01905 SM01210 A361_01905 A361_01940 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A361_01940 SM00292 breast cancer carboxy-terminal domain A361_01940 SM00532 Ligase N family A361_01990 SM00845 GatB domain A361_01995 SM00850 LytTr DNA-binding domain A361_02000 SM00382 ATPases associated with a variety of cellular activities A361_02020 SM01131 A361_02020 A361_02040 SM01207 A361_02040 A361_02060 SM00046 Diacylglycerol kinase catalytic domain (presumed) A361_02070 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_02070 SM00091 PAS domain A361_02070 SM00387 Histidine kinase-like ATPases A361_02070 SM00388 His Kinase A (phosphoacceptor) domain A361_02080 SM00287 Bacterial SH3 domain homologues A361_02095 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_02095 SM00091 PAS domain A361_02095 SM00387 Histidine kinase-like ATPases A361_02095 SM00388 His Kinase A (phosphoacceptor) domain A361_02135 SM00849 Metallo-beta-lactamase superfamily A361_02155 SM01022 A361_02155 A361_02180 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_02180 SM00387 Histidine kinase-like ATPases A361_02180 SM00388 His Kinase A (phosphoacceptor) domain A361_02180 SM00448 cheY-homologous receiver domain A361_02185 SM00138 Methyltransferase, chemotaxis proteins A361_02190 SM00331 Sigma factor PP2C-like phosphatases A361_02190 SM00448 cheY-homologous receiver domain A361_02325 SM00382 ATPases associated with a variety of cellular activities A361_02355 SM00342 helix_turn_helix, arabinose operon control protein A361_02400 SM00382 ATPases associated with a variety of cellular activities A361_02450 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_02450 SM00091 PAS domain A361_02450 SM00387 Histidine kinase-like ATPases A361_02450 SM00388 His Kinase A (phosphoacceptor) domain A361_02700 SM00387 Histidine kinase-like ATPases A361_02700 SM00388 His Kinase A (phosphoacceptor) domain A361_02705 SM00448 cheY-homologous receiver domain A361_02705 SM00862 Transcriptional regulatory protein, C terminal A361_02740 SM00448 cheY-homologous receiver domain A361_02740 SM00862 Transcriptional regulatory protein, C terminal A361_02745 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_02745 SM00387 Histidine kinase-like ATPases A361_02745 SM00388 His Kinase A (phosphoacceptor) domain A361_02750 SM00382 ATPases associated with a variety of cellular activities A361_02775 SM00382 ATPases associated with a variety of cellular activities A361_02820 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_02820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_02880 SM00835 Cupin A361_02920 SM00850 LytTr DNA-binding domain A361_02930 SM00382 ATPases associated with a variety of cellular activities A361_02945 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_02965 SM00914 A361_02965 A361_03015 SM00091 PAS domain A361_03015 SM00382 ATPases associated with a variety of cellular activities A361_03035 SM01329 A361_03035 A361_03050 SM00344 helix_turn_helix ASNC type A361_03095 SM00448 cheY-homologous receiver domain A361_03095 SM00862 Transcriptional regulatory protein, C terminal A361_03100 SM00387 Histidine kinase-like ATPases A361_03100 SM00388 His Kinase A (phosphoacceptor) domain A361_03155 SM00382 ATPases associated with a variety of cellular activities A361_03170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_03170 SM00387 Histidine kinase-like ATPases A361_03175 SM00342 helix_turn_helix, arabinose operon control protein A361_03175 SM00448 cheY-homologous receiver domain A361_03205 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_03225 SM01266 A361_03225 A361_03340 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_03350 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_03350 SM00387 Histidine kinase-like ATPases A361_03350 SM00388 His Kinase A (phosphoacceptor) domain A361_03355 SM00448 cheY-homologous receiver domain A361_03355 SM00862 Transcriptional regulatory protein, C terminal A361_03360 SM00248 ankyrin repeats A361_03400 SM00946 Prolyl-tRNA synthetase, C-terminal A361_03545 SM00382 ATPases associated with a variety of cellular activities A361_03615 SM00422 helix_turn_helix, mercury resistance A361_03620 SM00829 Enoylreductase A361_03645 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_03665 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_03870 SM00448 cheY-homologous receiver domain A361_03875 SM00387 Histidine kinase-like ATPases A361_03895 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_03935 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_03970 SM01059 Chloramphenicol acetyltransferase A361_03990 SM00382 ATPases associated with a variety of cellular activities A361_04055 SM00028 Tetratricopeptide repeats A361_04055 SM00530 Helix-turn-helix XRE-family like proteins A361_04075 SM00823 Phosphopantetheine attachment site A361_04085 SM00382 ATPases associated with a variety of cellular activities A361_04090 SM00923 MbtH-like protein A361_04180 SM00344 helix_turn_helix ASNC type A361_04185 SM00342 helix_turn_helix, arabinose operon control protein A361_04200 SM01207 A361_04200 A361_04230 SM00849 Metallo-beta-lactamase superfamily A361_04235 SM00267 diguanylate cyclase A361_04275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_04275 SM00387 Histidine kinase-like ATPases A361_04275 SM00388 His Kinase A (phosphoacceptor) domain A361_04280 SM00448 cheY-homologous receiver domain A361_04280 SM00862 Transcriptional regulatory protein, C terminal A361_04350 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain A361_04370 SM00478 endonuclease III A361_04370 SM01009 AlkA N-terminal domain A361_04375 SM00342 helix_turn_helix, arabinose operon control protein A361_04390 SM00448 cheY-homologous receiver domain A361_04390 SM00862 Transcriptional regulatory protein, C terminal A361_04395 SM00387 Histidine kinase-like ATPases A361_04395 SM00388 His Kinase A (phosphoacceptor) domain A361_04405 SM00342 helix_turn_helix, arabinose operon control protein A361_04445 SM00448 cheY-homologous receiver domain A361_04445 SM00862 Transcriptional regulatory protein, C terminal A361_04450 SM00387 Histidine kinase-like ATPases A361_04460 SM00382 ATPases associated with a variety of cellular activities A361_04475 SM00448 cheY-homologous receiver domain A361_04475 SM00862 Transcriptional regulatory protein, C terminal A361_04480 SM00387 Histidine kinase-like ATPases A361_04480 SM00388 His Kinase A (phosphoacceptor) domain A361_04485 SM00382 ATPases associated with a variety of cellular activities A361_04525 SM00357 Cold shock protein domain A361_04530 SM00422 helix_turn_helix, mercury resistance A361_04590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_04605 SM00382 ATPases associated with a variety of cellular activities A361_04675 SM00422 helix_turn_helix, mercury resistance A361_04690 SM00382 ATPases associated with a variety of cellular activities A361_04720 SM00422 helix_turn_helix, mercury resistance A361_04740 SM00422 helix_turn_helix, mercury resistance A361_04790 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A361_04835 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_04835 SM00895 A361_04835 A361_04865 SM00850 LytTr DNA-binding domain A361_04885 SM00387 Histidine kinase-like ATPases A361_04890 SM00448 cheY-homologous receiver domain A361_04925 SM00849 Metallo-beta-lactamase superfamily A361_04945 SM00855 Phosphoglycerate mutase family A361_04950 SM00387 Histidine kinase-like ATPases A361_04950 SM00388 His Kinase A (phosphoacceptor) domain A361_04965 SM01060 A361_04965 A361_04970 SM00342 helix_turn_helix, arabinose operon control protein A361_04970 SM00871 Bacterial transcription activator, effector binding domain A361_05020 SM00479 A361_05020 A361_05025 SM00387 Histidine kinase-like ATPases A361_05025 SM00388 His Kinase A (phosphoacceptor) domain A361_05055 SM00448 cheY-homologous receiver domain A361_05055 SM00850 LytTr DNA-binding domain A361_05060 SM00387 Histidine kinase-like ATPases A361_05090 SM00363 S4 RNA-binding domain A361_05095 SM00829 Enoylreductase A361_05135 SM01007 Class II Aldolase and Adducin N-terminal domain A361_05185 SM00387 Histidine kinase-like ATPases A361_05185 SM00388 His Kinase A (phosphoacceptor) domain A361_05200 SM00487 DEAD-like helicases superfamily A361_05200 SM00490 helicase superfamily c-terminal domain A361_05245 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A361_05245 SM01232 A361_05245 A361_05295 SM00387 Histidine kinase-like ATPases A361_05300 SM00421 helix_turn_helix, Lux Regulon A361_05300 SM00448 cheY-homologous receiver domain A361_05395 SM00155 Phospholipase D. Active site motifs. A361_05510 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A361_05510 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A361_05510 SM00493 A361_05510 A361_05530 SM00493 A361_05530 A361_05590 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_05615 SM00530 Helix-turn-helix XRE-family like proteins A361_05650 SM00530 Helix-turn-helix XRE-family like proteins A361_05655 SM00450 Rhodanese Homology Domain A361_05670 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_05670 SM00866 A361_05670 A361_05770 SM00478 endonuclease III A361_05800 SM00382 ATPases associated with a variety of cellular activities A361_05815 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_05895 SM00342 helix_turn_helix, arabinose operon control protein A361_05895 SM00448 cheY-homologous receiver domain A361_05905 SM00382 ATPases associated with a variety of cellular activities A361_05910 SM00382 ATPases associated with a variety of cellular activities A361_05940 SM00248 ankyrin repeats A361_06015 SM00382 ATPases associated with a variety of cellular activities A361_06020 SM00382 ATPases associated with a variety of cellular activities A361_06030 SM00382 ATPases associated with a variety of cellular activities A361_06035 SM00382 ATPases associated with a variety of cellular activities A361_06040 SM00327 von Willebrand factor (vWF) type A domain A361_06095 SM00478 endonuclease III A361_06095 SM00525 A361_06095 A361_06125 SM00382 ATPases associated with a variety of cellular activities A361_06130 SM00382 ATPases associated with a variety of cellular activities A361_06135 SM00382 ATPases associated with a variety of cellular activities A361_06170 SM00382 ATPases associated with a variety of cellular activities A361_06340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_06345 SM00342 helix_turn_helix, arabinose operon control protein A361_06345 SM00448 cheY-homologous receiver domain A361_06375 SM00873 B3/4 domain A361_06380 SM00567 E-Z type HEAT repeats A361_06400 SM00763 PrkA AAA domain A361_06550 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A361_06555 SM00421 helix_turn_helix, Lux Regulon A361_06555 SM00448 cheY-homologous receiver domain A361_06575 SM00448 cheY-homologous receiver domain A361_06575 SM00862 Transcriptional regulatory protein, C terminal A361_06580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_06580 SM00387 Histidine kinase-like ATPases A361_06580 SM00388 His Kinase A (phosphoacceptor) domain A361_06610 SM00450 Rhodanese Homology Domain A361_06615 SM00450 Rhodanese Homology Domain A361_06615 SM00849 Metallo-beta-lactamase superfamily A361_06655 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_06665 SM00448 cheY-homologous receiver domain A361_06665 SM00862 Transcriptional regulatory protein, C terminal A361_06670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_06670 SM00387 Histidine kinase-like ATPases A361_06670 SM00388 His Kinase A (phosphoacceptor) domain A361_06675 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_06675 SM01091 Transporter associated domain A361_06690 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_06690 SM01091 Transporter associated domain A361_06700 SM00387 Histidine kinase-like ATPases A361_06700 SM00388 His Kinase A (phosphoacceptor) domain A361_06705 SM00530 Helix-turn-helix XRE-family like proteins A361_06765 SM00382 ATPases associated with a variety of cellular activities A361_06770 SM00382 ATPases associated with a variety of cellular activities A361_06790 SM00382 ATPases associated with a variety of cellular activities A361_06860 SM00382 ATPases associated with a variety of cellular activities A361_06880 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_06900 SM00382 ATPases associated with a variety of cellular activities A361_06935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_06965 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_06995 SM00382 ATPases associated with a variety of cellular activities A361_07015 SM00014 Acid phosphatase homologues A361_07030 SM00387 Histidine kinase-like ATPases A361_07035 SM00421 helix_turn_helix, Lux Regulon A361_07035 SM00448 cheY-homologous receiver domain A361_07070 SM00849 Metallo-beta-lactamase superfamily A361_07100 SM00382 ATPases associated with a variety of cellular activities A361_07105 SM00530 Helix-turn-helix XRE-family like proteins A361_07130 SM00914 A361_07130 A361_07170 SM00822 A361_07170 A361_07255 SM00052 Putative diguanylate phosphodiesterase A361_07255 SM00091 PAS domain A361_07255 SM00267 diguanylate cyclase A361_07255 SM00897 FIST N domain A361_07255 SM01204 A361_07255 A361_07275 SM00642 Alpha-amylase domain A361_07295 SM00642 Alpha-amylase domain A361_07300 SM00354 helix_turn _helix lactose operon repressor A361_07365 SM00100 Cyclic nucleotide-monophosphate binding domain A361_07365 SM00419 helix_turn_helix, cAMP Regulatory protein A361_07370 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_07380 SM00852 Probable molybdopterin binding domain A361_07395 SM00859 Semialdehyde dehydrogenase, NAD binding domain A361_07415 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A361_07420 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A361_07440 SM00382 ATPases associated with a variety of cellular activities A361_07440 SM01086 C-terminal, D2-small domain, of ClpB protein A361_07490 SM00825 Beta-ketoacyl synthase A361_07500 SM00382 ATPases associated with a variety of cellular activities A361_07505 SM00382 ATPases associated with a variety of cellular activities A361_07550 SM00382 ATPases associated with a variety of cellular activities A361_07555 SM00382 ATPases associated with a variety of cellular activities A361_07610 SM01118 A361_07610 A361_07620 SM00954 Region found in RelA / SpoT proteins A361_07640 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_07640 SM00924 MgtE intracellular N domain A361_07775 SM00487 DEAD-like helicases superfamily A361_07775 SM00490 helicase superfamily c-terminal domain A361_07785 SM00530 Helix-turn-helix XRE-family like proteins A361_07790 SM00530 Helix-turn-helix XRE-family like proteins A361_07805 SM00530 Helix-turn-helix XRE-family like proteins A361_07840 SM00155 Phospholipase D. Active site motifs. A361_07980 SM00257 Lysin motif A361_07980 SM00646 A361_07980 A361_08040 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_08065 SM00479 A361_08065 A361_08130 SM00244 prohibitin homologues A361_08145 SM00382 ATPases associated with a variety of cellular activities A361_08190 SM00382 ATPases associated with a variety of cellular activities A361_08230 SM00642 Alpha-amylase domain A361_08235 SM00642 Alpha-amylase domain A361_08315 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_08360 SM00257 Lysin motif A361_08360 SM00646 A361_08360 A361_08375 SM01119 A361_08375 A361_08395 SM00870 A361_08395 A361_08415 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_08415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_08420 SM00091 PAS domain A361_08420 SM00387 Histidine kinase-like ATPases A361_08420 SM00388 His Kinase A (phosphoacceptor) domain A361_08430 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_08455 SM01007 Class II Aldolase and Adducin N-terminal domain A361_08470 SM00893 Electron transfer flavoprotein domain A361_08475 SM00893 Electron transfer flavoprotein domain A361_08505 SM00387 Histidine kinase-like ATPases A361_08505 SM00388 His Kinase A (phosphoacceptor) domain A361_08515 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_08525 SM00382 ATPases associated with a variety of cellular activities A361_08525 SM01086 C-terminal, D2-small domain, of ClpB protein A361_08560 SM00382 ATPases associated with a variety of cellular activities A361_08580 SM00382 ATPases associated with a variety of cellular activities A361_08645 SM00260 Two component signalling adaptor domain A361_08645 SM00448 cheY-homologous receiver domain A361_08670 SM00257 Lysin motif A361_08690 SM00052 Putative diguanylate phosphodiesterase A361_08710 SM00849 Metallo-beta-lactamase superfamily A361_08750 SM00382 ATPases associated with a variety of cellular activities A361_08755 SM00382 ATPases associated with a variety of cellular activities A361_08765 SM00849 Metallo-beta-lactamase superfamily A361_08795 SM00861 Transketolase, pyrimidine binding domain A361_08885 SM00838 Elongation factor G C-terminus A361_08915 SM00670 Large family of predicted nucleotide-binding domains A361_08940 SM00878 Biotin carboxylase C-terminal domain A361_09005 SM00257 Lysin motif A361_09010 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_09090 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_09125 SM00878 Biotin carboxylase C-terminal domain A361_09170 SM00740 A361_09170 A361_09175 SM00740 A361_09175 A361_09235 SM00842 Cell division protein FtsA A361_09240 SM00864 Tubulin/FtsZ family, GTPase domain A361_09240 SM00865 Tubulin/FtsZ family, C-terminal domain A361_09290 SM00363 S4 RNA-binding domain A361_09320 SM00363 S4 RNA-binding domain A361_09345 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain A361_09350 SM00851 MGS-like domain A361_09350 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain A361_09365 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A361_09380 SM00831 Cation transporter/ATPase, N-terminus A361_09395 SM00072 Guanylate kinase homologues. A361_09400 SM01409 A361_09400 A361_09410 SM00487 DEAD-like helicases superfamily A361_09410 SM00490 helicase superfamily c-terminal domain A361_09435 SM00331 Sigma factor PP2C-like phosphatases A361_09435 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain A361_09440 SM00220 Serine/Threonine protein kinases, catalytic domain A361_09440 SM00740 A361_09440 A361_09455 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain A361_09475 SM01120 A361_09475 A361_09475 SM01121 A361_09475 A361_09480 SM00487 DEAD-like helicases superfamily A361_09480 SM00490 helicase superfamily c-terminal domain A361_09495 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. A361_09500 SM00822 A361_09500 A361_09510 SM00358 Double-stranded RNA binding motif A361_09510 SM00535 Ribonuclease III family A361_09515 SM00968 SMC proteins Flexible Hinge Domain A361_09520 SM00382 ATPases associated with a variety of cellular activities A361_09520 SM00962 SRP54-type protein, GTPase domain A361_09520 SM00963 SRP54-type protein, helical bundle domain A361_09530 SM00382 ATPases associated with a variety of cellular activities A361_09545 SM00382 ATPases associated with a variety of cellular activities A361_09560 SM00327 von Willebrand factor (vWF) type A domain A361_09570 SM00382 ATPases associated with a variety of cellular activities A361_09570 SM00962 SRP54-type protein, GTPase domain A361_09570 SM00963 SRP54-type protein, helical bundle domain A361_09635 SM00881 CoA binding domain A361_09645 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A361_09645 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A361_09645 SM00493 A361_09645 A361_09665 SM00382 ATPases associated with a variety of cellular activities A361_09665 SM01086 C-terminal, D2-small domain, of ClpB protein A361_09705 SM00382 ATPases associated with a variety of cellular activities A361_09760 SM00448 cheY-homologous receiver domain A361_09795 SM00962 SRP54-type protein, GTPase domain A361_09805 SM00448 cheY-homologous receiver domain A361_09810 SM00073 Histidine Phosphotransfer domain A361_09810 SM00260 Two component signalling adaptor domain A361_09810 SM00387 Histidine kinase-like ATPases A361_09810 SM01231 A361_09810 A361_09815 SM00260 Two component signalling adaptor domain A361_09885 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_09895 SM00479 A361_09895 A361_09895 SM00481 DNA polymerase alpha chain like domain A361_09905 SM00316 Ribosomal protein S1-like RNA-binding domain A361_09905 SM00322 K homology RNA-binding domain A361_09940 SM00904 Riboflavin kinase A361_09945 SM01387 A361_09945 A361_09950 SM00316 Ribosomal protein S1-like RNA-binding domain A361_09950 SM00322 K homology RNA-binding domain A361_09985 SM00859 Semialdehyde dehydrogenase, NAD binding domain A361_09995 SM01130 A361_09995 A361_10000 SM00849 Metallo-beta-lactamase superfamily A361_10015 SM00382 ATPases associated with a variety of cellular activities A361_10015 SM00843 A361_10015 A361_10020 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_10020 SM00866 A361_10020 A361_10030 SM00382 ATPases associated with a variety of cellular activities A361_10080 SM00852 Probable molybdopterin binding domain A361_10085 SM00382 ATPases associated with a variety of cellular activities A361_10090 SM00322 K homology RNA-binding domain A361_10090 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_10120 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_10165 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_10180 SM00422 helix_turn_helix, mercury resistance A361_10220 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A361_10220 SM00534 ATPase domain of DNA mismatch repair MUTS family A361_10225 SM00853 MutL C terminal dimerisation domain A361_10225 SM01340 A361_10225 A361_10245 SM00382 ATPases associated with a variety of cellular activities A361_10275 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_10275 SM00895 A361_10275 A361_10315 SM00422 helix_turn_helix, mercury resistance A361_10320 SM01230 A361_10320 A361_10355 SM00257 Lysin motif A361_10360 SM00857 Resolvase, N terminal domain A361_10370 SM00861 Transketolase, pyrimidine binding domain A361_10605 SM00530 Helix-turn-helix XRE-family like proteins A361_10640 SM00382 ATPases associated with a variety of cellular activities A361_10645 SM00382 ATPases associated with a variety of cellular activities A361_10655 SM00344 helix_turn_helix ASNC type A361_10670 SM00448 cheY-homologous receiver domain A361_10720 SM00530 Helix-turn-helix XRE-family like proteins A361_10780 SM00530 Helix-turn-helix XRE-family like proteins A361_10785 SM01040 BRO family, N-terminal domain A361_10820 SM00857 Resolvase, N terminal domain A361_10895 SM00257 Lysin motif A361_10940 SM00644 A361_10940 A361_10940 SM00701 Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme. A361_11000 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11005 SM00382 ATPases associated with a variety of cellular activities A361_11015 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11015 SM00895 A361_11015 A361_11065 SM00871 Bacterial transcription activator, effector binding domain A361_11120 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11155 SM01240 A361_11155 A361_11195 SM00450 Rhodanese Homology Domain A361_11200 SM00354 helix_turn _helix lactose operon repressor A361_11225 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11225 SM00866 A361_11225 A361_11275 SM00060 Fibronectin type 3 domain A361_11280 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_11345 SM01060 A361_11345 A361_11360 SM00919 Malic enzyme, NAD binding domain A361_11360 SM01274 A361_11360 A361_11370 SM00382 ATPases associated with a variety of cellular activities A361_11390 SM00421 helix_turn_helix, Lux Regulon A361_11395 SM00530 Helix-turn-helix XRE-family like proteins A361_11405 SM00631 A361_11405 A361_11415 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11415 SM00895 A361_11415 A361_11455 SM01236 A361_11455 A361_11480 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_11480 SM00895 A361_11480 A361_11500 SM00387 Histidine kinase-like ATPases A361_11505 SM00342 helix_turn_helix, arabinose operon control protein A361_11505 SM00448 cheY-homologous receiver domain A361_11535 SM00849 Metallo-beta-lactamase superfamily A361_11575 SM00354 helix_turn _helix lactose operon repressor A361_11580 SM00642 Alpha-amylase domain A361_11595 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_11595 SM00091 PAS domain A361_11595 SM00267 diguanylate cyclase A361_11650 SM00091 PAS domain A361_11650 SM00382 ATPases associated with a variety of cellular activities A361_11675 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_11690 SM00833 Cobalamin synthesis protein cobW C-terminal domain A361_11710 SM00357 Cold shock protein domain A361_11740 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain A361_11760 SM00257 Lysin motif A361_11820 SM00382 ATPases associated with a variety of cellular activities A361_11920 SM00488 A361_11920 A361_11920 SM00491 A361_11920 A361_11950 SM00448 cheY-homologous receiver domain A361_11950 SM00862 Transcriptional regulatory protein, C terminal A361_11955 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_11955 SM00387 Histidine kinase-like ATPases A361_11955 SM00388 His Kinase A (phosphoacceptor) domain A361_11980 SM00318 Staphylococcal nuclease homologues A361_11980 SM00894 Excalibur calcium-binding domain A361_12105 SM00382 ATPases associated with a variety of cellular activities A361_12115 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A361_12125 SM00861 Transketolase, pyrimidine binding domain A361_12150 SM00903 Flavin reductase like domain A361_12170 SM00382 ATPases associated with a variety of cellular activities A361_12180 SM01060 A361_12180 A361_12265 SM00382 ATPases associated with a variety of cellular activities A361_12295 SM00854 Bacterial capsule synthesis protein PGA_cap A361_12300 SM00387 Histidine kinase-like ATPases A361_12300 SM00388 His Kinase A (phosphoacceptor) domain A361_12305 SM01207 A361_12305 A361_12345 SM01008 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain A361_12350 SM01092 CO dehydrogenase flavoprotein C-terminal domain A361_12395 SM00877 A361_12395 A361_12405 SM00877 A361_12405 A361_12410 SM00877 A361_12410 A361_12460 SM00387 Histidine kinase-like ATPases A361_12460 SM00433 TopoisomeraseII A361_12465 SM00434 DNA Topoisomerase IV A361_12565 SM00382 ATPases associated with a variety of cellular activities A361_12605 SM00636 A361_12605 A361_12630 SM00421 helix_turn_helix, Lux Regulon A361_12630 SM00448 cheY-homologous receiver domain A361_12660 SM00487 DEAD-like helicases superfamily A361_12660 SM00490 helicase superfamily c-terminal domain A361_12690 SM00518 AP endonuclease family 2 A361_12695 SM00490 helicase superfamily c-terminal domain A361_12700 SM00867 YceI-like domain A361_12745 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_12785 SM00257 Lysin motif A361_12785 SM00636 A361_12785 A361_12805 SM00479 A361_12805 A361_12825 SM00257 Lysin motif A361_12830 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_12830 SM00091 PAS domain A361_12830 SM00387 Histidine kinase-like ATPases A361_12830 SM00388 His Kinase A (phosphoacceptor) domain A361_12915 SM00382 ATPases associated with a variety of cellular activities A361_12960 SM00342 helix_turn_helix, arabinose operon control protein A361_12970 SM00257 Lysin motif A361_13060 SM00861 Transketolase, pyrimidine binding domain A361_13090 SM01018 B12 binding domain A361_13205 SM00382 ATPases associated with a variety of cellular activities A361_13210 SM00387 Histidine kinase-like ATPases A361_13210 SM00388 His Kinase A (phosphoacceptor) domain A361_13235 SM00382 ATPases associated with a variety of cellular activities A361_13260 SM00796 Allophanate hydrolase subunit 1 A361_13265 SM00797 Allophanate hydrolase subunit 2 A361_13405 SM00422 helix_turn_helix, mercury resistance A361_13435 SM01091 Transporter associated domain A361_13445 SM00382 ATPases associated with a variety of cellular activities A361_13460 SM00710 Parallel beta-helix repeats A361_13490 SM00646 A361_13490 A361_13550 SM00903 Flavin reductase like domain A361_13585 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_13585 SM00895 A361_13585 A361_13605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_13605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_13620 SM00829 Enoylreductase A361_13685 SM00631 A361_13685 A361_13695 SM00382 ATPases associated with a variety of cellular activities A361_13725 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_13725 SM00895 A361_13725 A361_13745 SM00091 PAS domain A361_13745 SM00382 ATPases associated with a variety of cellular activities A361_13760 SM00914 A361_13760 A361_13770 SM00877 A361_13770 A361_13790 SM00877 A361_13790 A361_13800 SM00877 A361_13800 A361_13825 SM00877 A361_13825 A361_13835 SM00448 cheY-homologous receiver domain A361_13835 SM01012 A361_13835 A361_13875 SM00829 Enoylreductase A361_13915 SM00822 A361_13915 A361_13935 SM00342 helix_turn_helix, arabinose operon control protein A361_13935 SM00871 Bacterial transcription activator, effector binding domain A361_13980 SM00954 Region found in RelA / SpoT proteins A361_13985 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_14000 SM00530 Helix-turn-helix XRE-family like proteins A361_14005 SM00028 Tetratricopeptide repeats A361_14005 SM00530 Helix-turn-helix XRE-family like proteins A361_14040 SM00448 cheY-homologous receiver domain A361_14040 SM00862 Transcriptional regulatory protein, C terminal A361_14045 SM00387 Histidine kinase-like ATPases A361_14050 SM00382 ATPases associated with a variety of cellular activities A361_14110 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_14110 SM00866 A361_14110 A361_14150 SM00257 Lysin motif A361_14180 SM00387 Histidine kinase-like ATPases A361_14180 SM00388 His Kinase A (phosphoacceptor) domain A361_14210 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase A361_14215 SM00849 Metallo-beta-lactamase superfamily A361_14220 SM00316 Ribosomal protein S1-like RNA-binding domain A361_14305 SM00346 helix_turn_helix isocitrate lyase regulation A361_14360 SM00257 Lysin motif A361_14400 SM00342 helix_turn_helix, arabinose operon control protein A361_14435 SM01207 A361_14435 A361_14440 SM00382 ATPases associated with a variety of cellular activities A361_14455 SM00529 Helix-turn-helix diphteria tox regulatory element A361_14515 SM00382 ATPases associated with a variety of cellular activities A361_14530 SM00062 Bacterial periplasmic substrate-binding proteins A361_14530 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A361_14535 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_14535 SM00895 A361_14535 A361_14555 SM01329 A361_14555 A361_14580 SM00882 Coenzyme A transferase A361_14585 SM00882 Coenzyme A transferase A361_14615 SM00382 ATPases associated with a variety of cellular activities A361_14720 SM00382 ATPases associated with a variety of cellular activities A361_14730 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_14730 SM00866 A361_14730 A361_14860 SM00382 ATPases associated with a variety of cellular activities A361_14885 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_14900 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_14965 SM00382 ATPases associated with a variety of cellular activities A361_15010 SM00530 Helix-turn-helix XRE-family like proteins A361_15075 SM00382 ATPases associated with a variety of cellular activities A361_15195 SM00346 helix_turn_helix isocitrate lyase regulation A361_15225 SM00091 PAS domain A361_15225 SM00382 ATPases associated with a variety of cellular activities A361_15245 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A361_15245 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A361_15260 SM00382 ATPases associated with a variety of cellular activities A361_15265 SM00387 Histidine kinase-like ATPases A361_15265 SM00388 His Kinase A (phosphoacceptor) domain A361_15270 SM00448 cheY-homologous receiver domain A361_15270 SM00862 Transcriptional regulatory protein, C terminal A361_15290 SM00100 Cyclic nucleotide-monophosphate binding domain A361_15290 SM00419 helix_turn_helix, cAMP Regulatory protein A361_15300 SM00382 ATPases associated with a variety of cellular activities A361_15345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_15345 SM00387 Histidine kinase-like ATPases A361_15345 SM00388 His Kinase A (phosphoacceptor) domain A361_15350 SM00448 cheY-homologous receiver domain A361_15350 SM00862 Transcriptional regulatory protein, C terminal A361_15365 SM00849 Metallo-beta-lactamase superfamily A361_15415 SM00530 Helix-turn-helix XRE-family like proteins A361_15425 SM00354 helix_turn _helix lactose operon repressor A361_15455 SM00984 UDP binding domain A361_15460 SM00382 ATPases associated with a variety of cellular activities A361_15575 SM00091 PAS domain A361_15575 SM00382 ATPases associated with a variety of cellular activities A361_15585 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_15585 SM00895 A361_15585 A361_15610 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_15620 SM00829 Enoylreductase A361_15675 SM01350 A361_15675 A361_15685 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A361_15705 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_15705 SM00091 PAS domain A361_15705 SM00387 Histidine kinase-like ATPases A361_15705 SM00388 His Kinase A (phosphoacceptor) domain A361_15780 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A361_15825 SM00342 helix_turn_helix, arabinose operon control protein A361_15930 SM00530 Helix-turn-helix XRE-family like proteins A361_15995 SM00640 Glycosyl hydrolases family 32 A361_16005 SM00354 helix_turn _helix lactose operon repressor A361_16095 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_16100 SM00382 ATPases associated with a variety of cellular activities A361_16105 SM00382 ATPases associated with a variety of cellular activities A361_16190 SM00530 Helix-turn-helix XRE-family like proteins A361_16210 SM00382 ATPases associated with a variety of cellular activities A361_16215 SM00829 Enoylreductase A361_16230 SM00861 Transketolase, pyrimidine binding domain A361_16255 SM00382 ATPases associated with a variety of cellular activities A361_16260 SM00421 helix_turn_helix, Lux Regulon A361_16260 SM00448 cheY-homologous receiver domain A361_16280 SM00507 HNH nucleases A361_16365 SM00028 Tetratricopeptide repeats A361_16375 SM00257 Lysin motif A361_16460 SM00465 GIY-YIG type nucleases (URI domain) A361_16515 SM00342 helix_turn_helix, arabinose operon control protein A361_16550 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A361_16550 SM00534 ATPase domain of DNA mismatch repair MUTS family A361_16610 SM00382 ATPases associated with a variety of cellular activities A361_16615 SM00382 ATPases associated with a variety of cellular activities A361_16655 SM00382 ATPases associated with a variety of cellular activities A361_16665 SM00382 ATPases associated with a variety of cellular activities A361_16675 SM00382 ATPases associated with a variety of cellular activities A361_16700 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_16700 SM00866 A361_16700 A361_16710 SM00481 DNA polymerase alpha chain like domain A361_16730 SM00420 helix_turn_helix, Deoxyribose operon repressor A361_16730 SM01134 A361_16730 A361_16740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_16785 SM00448 cheY-homologous receiver domain A361_16785 SM00862 Transcriptional regulatory protein, C terminal A361_16790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_16790 SM00387 Histidine kinase-like ATPases A361_16790 SM00388 His Kinase A (phosphoacceptor) domain A361_16805 SM00226 Low molecular weight phosphatase family A361_16815 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_16840 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_16865 SM00822 A361_16865 A361_16905 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_16955 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A361_16955 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A361_16960 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_16960 SM00866 A361_16960 A361_16975 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_16995 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A361_17020 SM00636 A361_17020 A361_17065 SM00327 von Willebrand factor (vWF) type A domain A361_17095 SM00354 helix_turn _helix lactose operon repressor A361_17190 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_17190 SM00895 A361_17190 A361_17230 SM00028 Tetratricopeptide repeats A361_17250 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. A361_17255 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_17305 SM00422 helix_turn_helix, mercury resistance A361_17310 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_17310 SM01091 Transporter associated domain A361_17375 SM00387 Histidine kinase-like ATPases A361_17375 SM00388 His Kinase A (phosphoacceptor) domain A361_17380 SM00448 cheY-homologous receiver domain A361_17380 SM00862 Transcriptional regulatory protein, C terminal A361_17385 SM00480 DNA polymerase III beta subunit A361_17415 SM00382 ATPases associated with a variety of cellular activities A361_17445 SM00487 DEAD-like helicases superfamily A361_17445 SM00490 helicase superfamily c-terminal domain A361_17465 SM00450 Rhodanese Homology Domain A361_17510 SM00871 Bacterial transcription activator, effector binding domain A361_17575 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A361_17635 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_17705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_17705 SM00387 Histidine kinase-like ATPases A361_17705 SM00388 His Kinase A (phosphoacceptor) domain A361_17710 SM00448 cheY-homologous receiver domain A361_17710 SM00862 Transcriptional regulatory protein, C terminal A361_17730 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_17755 SM00382 ATPases associated with a variety of cellular activities A361_17780 SM00382 ATPases associated with a variety of cellular activities A361_17790 SM00465 GIY-YIG type nucleases (URI domain) A361_17835 SM00382 ATPases associated with a variety of cellular activities A361_17840 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_17850 SM00346 helix_turn_helix isocitrate lyase regulation A361_17880 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_17880 SM00895 A361_17880 A361_17905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_17915 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A361_17915 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region A361_17980 SM00382 ATPases associated with a variety of cellular activities A361_17995 SM00422 helix_turn_helix, mercury resistance A361_18010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_18010 SM00091 PAS domain A361_18010 SM00387 Histidine kinase-like ATPases A361_18020 SM00421 helix_turn_helix, Lux Regulon A361_18020 SM00448 cheY-homologous receiver domain A361_18030 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_18030 SM00091 PAS domain A361_18060 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A361_18145 SM00062 Bacterial periplasmic substrate-binding proteins A361_18155 SM00382 ATPases associated with a variety of cellular activities A361_18240 SM00420 helix_turn_helix, Deoxyribose operon repressor A361_18240 SM01134 A361_18240 A361_18260 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_18260 SM00876 Biotin and Thiamin Synthesis associated domain A361_18355 SM00357 Cold shock protein domain A361_18360 SM00487 DEAD-like helicases superfamily A361_18360 SM00490 helicase superfamily c-terminal domain A361_18365 SM00357 Cold shock protein domain A361_18405 SM00014 Acid phosphatase homologues A361_18410 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen A361_18485 SM00382 ATPases associated with a variety of cellular activities A361_18560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_18560 SM00387 Histidine kinase-like ATPases A361_18560 SM00388 His Kinase A (phosphoacceptor) domain A361_18565 SM00448 cheY-homologous receiver domain A361_18565 SM00862 Transcriptional regulatory protein, C terminal A361_18590 SM00833 Cobalamin synthesis protein cobW C-terminal domain A361_18610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_18610 SM00245 tail specific protease A361_18670 SM00091 PAS domain A361_18670 SM00382 ATPases associated with a variety of cellular activities A361_18695 SM00882 Coenzyme A transferase A361_18700 SM00882 Coenzyme A transferase A361_18710 SM00028 Tetratricopeptide repeats A361_18785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_18785 SM00387 Histidine kinase-like ATPases A361_18785 SM00388 His Kinase A (phosphoacceptor) domain A361_18820 SM00563 Phosphate acyltransferases A361_18915 SM00567 E-Z type HEAT repeats A361_18915 SM00932 Scaffold protein Nfu/NifU N terminal A361_18920 SM00382 ATPases associated with a variety of cellular activities A361_18925 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_18975 SM00529 Helix-turn-helix diphteria tox regulatory element A361_18980 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain A361_18980 SM00437 Bacterial DNA topoisomerase I DNA-binding domain A361_18980 SM00493 A361_18980 A361_18985 SM00642 Alpha-amylase domain A361_19000 SM00357 Cold shock protein domain A361_19045 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A361_19045 SM00475 5'-3' exonuclease A361_19055 SM00450 Rhodanese Homology Domain A361_19145 SM00491 A361_19145 A361_19150 SM00981 A361_19150 A361_19180 SM00487 DEAD-like helicases superfamily A361_19180 SM00490 helicase superfamily c-terminal domain A361_19195 SM00100 Cyclic nucleotide-monophosphate binding domain A361_19195 SM00419 helix_turn_helix, cAMP Regulatory protein A361_19250 SM00060 Fibronectin type 3 domain A361_19270 SM00478 endonuclease III A361_19270 SM00525 A361_19270 A361_19300 SM00479 A361_19300 A361_19300 SM00487 DEAD-like helicases superfamily A361_19300 SM00491 A361_19300 A361_19340 SM00851 MGS-like domain A361_19415 SM00914 A361_19415 A361_19420 SM00028 Tetratricopeptide repeats A361_19460 SM00138 Methyltransferase, chemotaxis proteins A361_19465 SM00562 A361_19465 A361_19495 SM00411 bacterial (prokaryotic) histone like domain A361_19545 SM01240 A361_19545 A361_19550 SM00316 Ribosomal protein S1-like RNA-binding domain A361_19555 SM00563 Phosphate acyltransferases A361_19590 SM00870 A361_19590 A361_19600 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A361_19610 SM00422 helix_turn_helix, mercury resistance A361_19650 SM00257 Lysin motif A361_19660 SM00487 DEAD-like helicases superfamily A361_19660 SM00490 helicase superfamily c-terminal domain A361_19685 SM00257 Lysin motif A361_19700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_19700 SM00387 Histidine kinase-like ATPases A361_19700 SM00388 His Kinase A (phosphoacceptor) domain A361_19705 SM00448 cheY-homologous receiver domain A361_19705 SM00862 Transcriptional regulatory protein, C terminal A361_19725 SM00363 S4 RNA-binding domain A361_19820 SM00387 Histidine kinase-like ATPases A361_19830 SM00936 Penicillin-binding protein 5, C-terminal domain A361_19835 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain A361_19905 SM00882 Coenzyme A transferase A361_19910 SM00882 Coenzyme A transferase A361_19940 SM00704 CDGSH-type zinc finger. Function unknown. A361_19975 SM00849 Metallo-beta-lactamase superfamily A361_20005 SM00855 Phosphoglycerate mutase family A361_20010 SM00849 Metallo-beta-lactamase superfamily A361_20020 SM01350 A361_20020 A361_20030 SM00260 Two component signalling adaptor domain A361_20060 SM00382 ATPases associated with a variety of cellular activities A361_20070 SM00062 Bacterial periplasmic substrate-binding proteins A361_20070 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A361_20100 SM00861 Transketolase, pyrimidine binding domain A361_20120 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A361_20130 SM00091 PAS domain A361_20130 SM00382 ATPases associated with a variety of cellular activities A361_20140 SM00448 cheY-homologous receiver domain A361_20145 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_20160 SM00363 S4 RNA-binding domain A361_20165 SM00861 Transketolase, pyrimidine binding domain A361_20200 SM00878 Biotin carboxylase C-terminal domain A361_20245 SM00382 ATPases associated with a variety of cellular activities A361_20250 SM00098 Alkaline phosphatase homologues A361_20260 SM00841 Elongation factor P, C-terminal A361_20260 SM01185 A361_20260 A361_20310 SM00450 Rhodanese Homology Domain A361_20330 SM00487 DEAD-like helicases superfamily A361_20330 SM00490 helicase superfamily c-terminal domain A361_20440 SM00487 DEAD-like helicases superfamily A361_20440 SM00490 helicase superfamily c-terminal domain A361_20490 SM00530 Helix-turn-helix XRE-family like proteins A361_20515 SM00382 ATPases associated with a variety of cellular activities A361_20595 SM00855 Phosphoglycerate mutase family A361_20610 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_20610 SM00091 PAS domain A361_20610 SM00267 diguanylate cyclase A361_20635 SM00382 ATPases associated with a variety of cellular activities A361_20810 SM00849 Metallo-beta-lactamase superfamily A361_20830 SM00257 Lysin motif A361_20830 SM00631 A361_20830 A361_20850 SM00028 Tetratricopeptide repeats A361_20850 SM00671 Sel1-like repeats. A361_20905 SM00382 ATPases associated with a variety of cellular activities A361_20995 SM00382 ATPases associated with a variety of cellular activities A361_21005 SM00518 AP endonuclease family 2 A361_21010 SM00487 DEAD-like helicases superfamily A361_21010 SM00490 helicase superfamily c-terminal domain A361_21055 SM00400 zinc finger A361_21055 SM00493 A361_21055 A361_21070 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_21110 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_21160 SM01133 A361_21160 A361_21165 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_21180 SM00271 DnaJ molecular chaperone homology domain A361_21200 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_21210 SM00838 Elongation factor G C-terminus A361_21240 SM00849 Metallo-beta-lactamase superfamily A361_21250 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A361_21270 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_21280 SM01103 A361_21280 A361_21390 SM00732 Likely ribonuclease with RNase H fold. A361_21405 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A361_21430 SM00028 Tetratricopeptide repeats A361_21455 SM00382 ATPases associated with a variety of cellular activities A361_21465 SM00382 ATPases associated with a variety of cellular activities A361_21470 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains A361_21500 SM00287 Bacterial SH3 domain homologues A361_21500 SM00646 A361_21500 A361_21510 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_21510 SM00954 Region found in RelA / SpoT proteins A361_21555 SM01323 A361_21555 A361_21575 SM00382 ATPases associated with a variety of cellular activities A361_21580 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A361_21605 SM00257 Lysin motif A361_21650 SM01317 A361_21650 A361_21670 SM00316 Ribosomal protein S1-like RNA-binding domain A361_21730 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A361_21730 SM00267 diguanylate cyclase A361_21760 SM00257 Lysin motif A361_21770 SM01004 Delta-aminolevulinic acid dehydratase A361_21805 SM00382 ATPases associated with a variety of cellular activities A361_21815 SM00062 Bacterial periplasmic substrate-binding proteins A361_21815 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. A361_21825 SM00382 ATPases associated with a variety of cellular activities A361_21825 SM00464 Found in ATP-dependent protease La (LON) A361_21830 SM00382 ATPases associated with a variety of cellular activities A361_21835 SM00382 ATPases associated with a variety of cellular activities A361_21835 SM00994 ClpX C4-type zinc finger A361_21835 SM01086 C-terminal, D2-small domain, of ClpB protein A361_21860 SM01329 A361_21860 A361_21865 SM00917 LeuA allosteric (dimerisation) domain A361_21905 SM00909 Sporulation and spore germination A361_21910 SM00341 Helicase and RNase D C-terminal A361_21910 SM00487 DEAD-like helicases superfamily A361_21910 SM00490 helicase superfamily c-terminal domain A361_21910 SM00956 A361_21910 A361_21920 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_21925 SM00421 helix_turn_helix, Lux Regulon A361_21960 SM00465 GIY-YIG type nucleases (URI domain) A361_21970 SM00893 Electron transfer flavoprotein domain A361_21975 SM00893 Electron transfer flavoprotein domain A361_22005 SM00463 Small MutS-related domain A361_22005 SM00533 DNA-binding domain of DNA mismatch repair MUTS family A361_22005 SM00534 ATPase domain of DNA mismatch repair MUTS family A361_22010 SM00278 Helix-hairpin-helix DNA-binding motif class 1 A361_22010 SM00481 DNA polymerase alpha chain like domain A361_22010 SM00483 DNA polymerase X family A361_22030 SM00873 B3/4 domain A361_22030 SM00874 tRNA synthetase B5 domain A361_22030 SM00896 Ferredoxin-fold anticodon binding domain A361_22040 SM00967 RNA 2'-O ribose methyltransferase substrate binding A361_22090 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain A361_22100 SM00382 ATPases associated with a variety of cellular activities A361_22125 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A361_22140 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain A361_22140 SM01232 A361_22140 A361_22145 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs A361_22145 SM00474 3'-5' exonuclease A361_22145 SM00475 5'-3' exonuclease A361_22145 SM00482 DNA polymerase A domain A361_22150 SM00244 prohibitin homologues A361_22155 SM00244 prohibitin homologues A361_22160 SM00091 PAS domain A361_22160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_22160 SM00387 Histidine kinase-like ATPases A361_22160 SM00388 His Kinase A (phosphoacceptor) domain A361_22165 SM00448 cheY-homologous receiver domain A361_22165 SM00862 Transcriptional regulatory protein, C terminal A361_22180 SM01329 A361_22180 A361_22230 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_22235 SM00919 Malic enzyme, NAD binding domain A361_22235 SM01274 A361_22235 A361_22240 SM00481 DNA polymerase alpha chain like domain A361_22265 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_22275 SM00849 Metallo-beta-lactamase superfamily A361_22285 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A361_22285 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A361_22315 SM00852 Probable molybdopterin binding domain A361_22385 SM00981 A361_22385 A361_22415 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A361_22425 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. A361_22425 SM00267 diguanylate cyclase A361_22430 SM00363 S4 RNA-binding domain A361_22430 SM01390 A361_22430 A361_22435 SM00363 S4 RNA-binding domain A361_22455 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_22475 SM00354 helix_turn _helix lactose operon repressor A361_22480 SM00830 Chorismate mutase type II A361_22485 SM00842 Cell division protein FtsA A361_22525 SM00382 ATPases associated with a variety of cellular activities A361_22525 SM00843 A361_22525 A361_22570 SM00849 Metallo-beta-lactamase superfamily A361_22590 SM00642 Alpha-amylase domain A361_22595 SM00045 Diacylglycerol kinase accessory domain (presumed) A361_22595 SM00046 Diacylglycerol kinase catalytic domain (presumed) A361_22630 SM00382 ATPases associated with a variety of cellular activities A361_22635 SM00248 ankyrin repeats A361_22640 SM00420 helix_turn_helix, Deoxyribose operon repressor A361_22645 SM00363 S4 RNA-binding domain A361_22670 SM00450 Rhodanese Homology Domain A361_22690 SM00091 PAS domain A361_22690 SM00382 ATPases associated with a variety of cellular activities A361_22720 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_22785 SM00382 ATPases associated with a variety of cellular activities A361_22825 SM00155 Phospholipase D. Active site motifs. A361_22835 SM01234 A361_22835 A361_22840 SM00947 Carbonic anhydrase A361_22860 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_22935 SM00642 Alpha-amylase domain A361_23140 SM00382 ATPases associated with a variety of cellular activities A361_23175 SM00710 Parallel beta-helix repeats A361_23180 SM00710 Parallel beta-helix repeats A361_23210 SM00530 Helix-turn-helix XRE-family like proteins A361_23285 SM00382 ATPases associated with a variety of cellular activities A361_23320 SM00387 Histidine kinase-like ATPases A361_23320 SM00448 cheY-homologous receiver domain A361_23325 SM00448 cheY-homologous receiver domain A361_23325 SM01043 Bacterial transcriptional activator domain A361_23345 SM00448 cheY-homologous receiver domain A361_23350 SM00267 diguanylate cyclase A361_23375 SM00631 A361_23375 A361_23380 SM00939 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain A361_23425 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase A361_23440 SM00091 PAS domain A361_23440 SM00382 ATPases associated with a variety of cellular activities A361_23455 SM00316 Ribosomal protein S1-like RNA-binding domain A361_23460 SM00530 Helix-turn-helix XRE-family like proteins A361_23470 SM00344 helix_turn_helix ASNC type A361_23515 SM01298 A361_23515 A361_23520 SM00479 A361_23520 A361_23610 SM01002 Alanine dehydrogenase/PNT, C-terminal domain A361_23610 SM01003 Alanine dehydrogenase/PNT, N-terminal domain A361_23630 SM00822 A361_23630 A361_23645 SM00014 Acid phosphatase homologues A361_23790 SM00052 Putative diguanylate phosphodiesterase A361_23825 SM00729 Elongator protein 3, MiaB family, Radical SAM A361_23855 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_23890 SM00382 ATPases associated with a variety of cellular activities A361_23910 SM00382 ATPases associated with a variety of cellular activities A361_23910 SM00930 A361_23910 A361_23935 SM00493 A361_23935 A361_23990 SM00382 ATPases associated with a variety of cellular activities A361_24065 SM00382 ATPases associated with a variety of cellular activities A361_24075 SM00062 Bacterial periplasmic substrate-binding proteins A361_24095 SM00530 Helix-turn-helix XRE-family like proteins A361_24135 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_24145 SM00098 Alkaline phosphatase homologues A361_24185 SM00316 Ribosomal protein S1-like RNA-binding domain A361_24185 SM00357 Cold shock protein domain A361_24185 SM00955 A361_24185 A361_24210 SM01192 A361_24210 A361_24210 SM01193 A361_24210 A361_24230 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain A361_24290 SM00028 Tetratricopeptide repeats A361_24310 SM01130 A361_24310 A361_24330 SM00091 PAS domain A361_24330 SM00382 ATPases associated with a variety of cellular activities A361_24440 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_24440 SM00866 A361_24440 A361_24445 SM00646 A361_24445 A361_24480 SM00382 ATPases associated with a variety of cellular activities A361_24485 SM00487 DEAD-like helicases superfamily A361_24485 SM00490 helicase superfamily c-terminal domain A361_24515 SM00382 ATPases associated with a variety of cellular activities A361_24515 SM00930 A361_24515 A361_24525 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_24530 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_24530 SM00091 PAS domain A361_24530 SM00387 Histidine kinase-like ATPases A361_24530 SM00388 His Kinase A (phosphoacceptor) domain A361_24565 SM00849 Metallo-beta-lactamase superfamily A361_24580 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_24580 SM00924 MgtE intracellular N domain A361_24585 SM00014 Acid phosphatase homologues A361_24590 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_24595 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_24595 SM00245 tail specific protease A361_24615 SM00382 ATPases associated with a variety of cellular activities A361_24635 SM00937 A361_24635 A361_24645 SM00957 SecA DEAD-like domain A361_24645 SM00958 SecA preprotein cross-linking domain A361_24690 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_24690 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_24795 SM00052 Putative diguanylate phosphodiesterase A361_24795 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_24795 SM00091 PAS domain A361_24795 SM00267 diguanylate cyclase A361_24805 SM00487 DEAD-like helicases superfamily A361_24805 SM00490 helicase superfamily c-terminal domain A361_24820 SM00421 helix_turn_helix, Lux Regulon A361_24820 SM00448 cheY-homologous receiver domain A361_24825 SM00387 Histidine kinase-like ATPases A361_24875 SM00984 UDP binding domain A361_24900 SM00646 A361_24900 A361_24910 SM00047 Lysozyme subfamily 2 A361_24915 SM00646 A361_24915 A361_24935 SM00984 UDP binding domain A361_25040 SM00530 Helix-turn-helix XRE-family like proteins A361_25045 SM00028 Tetratricopeptide repeats A361_25045 SM00530 Helix-turn-helix XRE-family like proteins A361_25050 SM00257 Lysin motif A361_25080 SM01329 A361_25080 A361_25085 SM00822 A361_25085 A361_25135 SM00882 Coenzyme A transferase A361_25140 SM00882 Coenzyme A transferase A361_25145 SM00881 CoA binding domain A361_25150 SM00091 PAS domain A361_25150 SM00382 ATPases associated with a variety of cellular activities A361_25185 SM00382 ATPases associated with a variety of cellular activities A361_25225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_25225 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_25225 SM00319 Homologues of the ligand binding domain of Tar A361_25230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_25250 SM00091 PAS domain A361_25250 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_25250 SM00382 ATPases associated with a variety of cellular activities A361_25260 SM00354 helix_turn _helix lactose operon repressor A361_25330 SM00091 PAS domain A361_25330 SM00382 ATPases associated with a variety of cellular activities A361_25345 SM00354 helix_turn _helix lactose operon repressor A361_25455 SM00257 Lysin motif A361_25465 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_25525 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) A361_25525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_25545 SM00487 DEAD-like helicases superfamily A361_25545 SM00490 helicase superfamily c-terminal domain A361_25555 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_25565 SM00862 Transcriptional regulatory protein, C terminal A361_25665 SM00257 Lysin motif A361_25670 SM00479 A361_25670 A361_25675 SM00116 Domain in cystathionine beta-synthase and other proteins. A361_25745 SM00448 cheY-homologous receiver domain A361_25750 SM00091 PAS domain A361_25750 SM00387 Histidine kinase-like ATPases A361_25825 SM00257 Lysin motif A361_25840 SM00864 Tubulin/FtsZ family, GTPase domain A361_25840 SM00865 Tubulin/FtsZ family, C-terminal domain A361_25850 SM00382 ATPases associated with a variety of cellular activities A361_25950 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_25950 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_25955 SM00226 Low molecular weight phosphatase family A361_25990 SM00937 A361_25990 A361_25995 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_25995 SM00895 A361_25995 A361_26020 SM00357 Cold shock protein domain A361_26020 SM00382 ATPases associated with a variety of cellular activities A361_26020 SM00959 Rho termination factor, N-terminal domain A361_26050 SM00448 cheY-homologous receiver domain A361_26060 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family A361_26080 SM00829 Enoylreductase A361_26115 SM00354 helix_turn _helix lactose operon repressor A361_26170 SM00155 Phospholipase D. Active site motifs. A361_26200 SM00836 DALR anticodon binding domain A361_26200 SM01016 Arginyl tRNA synthetase N terminal dom A361_26245 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_26300 SM00986 Uracil DNA glycosylase superfamily A361_26300 SM00987 UreE urease accessory protein, C-terminal domain A361_26350 SM00642 Alpha-amylase domain A361_26350 SM01065 Starch binding domain A361_26360 SM00100 Cyclic nucleotide-monophosphate binding domain A361_26360 SM00419 helix_turn_helix, cAMP Regulatory protein A361_26365 SM00382 ATPases associated with a variety of cellular activities A361_26410 SM00382 ATPases associated with a variety of cellular activities A361_26445 SM00642 Alpha-amylase domain A361_26470 SM00267 diguanylate cyclase A361_26530 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). A361_26530 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_26575 SM00342 helix_turn_helix, arabinose operon control protein A361_26575 SM00871 Bacterial transcription activator, effector binding domain A361_26580 SM00530 Helix-turn-helix XRE-family like proteins A361_26595 SM00640 Glycosyl hydrolases family 32 A361_26605 SM00354 helix_turn _helix lactose operon repressor A361_26625 SM00345 helix_turn_helix gluconate operon transcriptional repressor A361_26625 SM00895 A361_26625 A361_26640 SM01350 A361_26640 A361_26670 SM00382 ATPases associated with a variety of cellular activities A361_26680 SM00354 helix_turn _helix lactose operon repressor A361_26690 SM00342 helix_turn_helix, arabinose operon control protein A361_26700 SM00860 SMI1 / KNR4 family A361_26735 SM00100 Cyclic nucleotide-monophosphate binding domain A361_26755 SM00530 Helix-turn-helix XRE-family like proteins A361_26790 SM00860 SMI1 / KNR4 family A361_26805 SM00860 SMI1 / KNR4 family A361_26830 SM00487 DEAD-like helicases superfamily A361_26830 SM00490 helicase superfamily c-terminal domain A361_26915 SM00530 Helix-turn-helix XRE-family like proteins A361_26940 SM00487 DEAD-like helicases superfamily A361_26940 SM00490 helicase superfamily c-terminal domain A361_26970 SM00857 Resolvase, N terminal domain A361_26980 SM00857 Resolvase, N terminal domain A361_26985 SM00857 Resolvase, N terminal domain A361_26990 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. A361_26995 SM00849 Metallo-beta-lactamase superfamily A361_27010 SM00091 PAS domain A361_27010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_27010 SM00387 Histidine kinase-like ATPases A361_27010 SM00388 His Kinase A (phosphoacceptor) domain A361_27015 SM00448 cheY-homologous receiver domain A361_27015 SM00862 Transcriptional regulatory protein, C terminal A361_27020 SM00257 Lysin motif A361_27020 SM01208 A361_27020 A361_27050 SM00788 Adenylosuccinate synthetase A361_27055 SM00382 ATPases associated with a variety of cellular activities A361_27065 SM00267 diguanylate cyclase A361_27100 SM00926 Molybdopterin oxidoreductase Fe4S4 domain A361_27125 SM00470 ParB-like nuclease domain A361_27135 SM00470 ParB-like nuclease domain A361_27145 SM01228 A361_27145 A361_27155 SM00393 Putative single-stranded nucleic acids-binding domain A361_27155 SM01245 A361_27155 A361_27250 SM00347 helix_turn_helix multiple antibiotic resistance protein A361_27295 SM00422 helix_turn_helix, mercury resistance A361_27300 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27310 SM00226 Low molecular weight phosphatase family A361_27320 SM00382 ATPases associated with a variety of cellular activities A361_27330 SM00195 Dual specificity phosphatase, catalytic domain A361_27335 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27405 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27430 SM00966 SpoVT / AbrB like domain A361_27435 SM00448 cheY-homologous receiver domain A361_27435 SM00862 Transcriptional regulatory protein, C terminal A361_27450 SM00448 cheY-homologous receiver domain A361_27450 SM00862 Transcriptional regulatory protein, C terminal A361_27455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_27455 SM00387 Histidine kinase-like ATPases A361_27455 SM00388 His Kinase A (phosphoacceptor) domain A361_27465 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27475 SM00899 A361_27475 A361_27490 SM00642 Alpha-amylase domain A361_27550 SM00287 Bacterial SH3 domain homologues A361_27550 SM00646 A361_27550 A361_27595 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27665 SM00506 Appr-1"-p processing enzyme A361_27705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_27705 SM00387 Histidine kinase-like ATPases A361_27705 SM00388 His Kinase A (phosphoacceptor) domain A361_27710 SM00448 cheY-homologous receiver domain A361_27710 SM00862 Transcriptional regulatory protein, C terminal A361_27745 SM00382 ATPases associated with a variety of cellular activities A361_27750 SM00382 ATPases associated with a variety of cellular activities A361_27770 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain A361_27770 SM00387 Histidine kinase-like ATPases A361_27770 SM00388 His Kinase A (phosphoacceptor) domain A361_27775 SM00448 cheY-homologous receiver domain A361_27775 SM00862 Transcriptional regulatory protein, C terminal A361_27780 SM00857 Resolvase, N terminal domain A361_27795 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27865 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_27910 SM00387 Histidine kinase-like ATPases A361_27910 SM00388 His Kinase A (phosphoacceptor) domain A361_27915 SM00448 cheY-homologous receiver domain A361_27915 SM00862 Transcriptional regulatory protein, C terminal A361_27955 SM00382 ATPases associated with a variety of cellular activities A361_27960 SM00382 ATPases associated with a variety of cellular activities A361_28080 SM00860 SMI1 / KNR4 family A361_28120 SM00448 cheY-homologous receiver domain A361_28120 SM00862 Transcriptional regulatory protein, C terminal A361_28195 SM00450 Rhodanese Homology Domain A361_28220 SM00450 Rhodanese Homology Domain A361_28220 SM00849 Metallo-beta-lactamase superfamily A361_28235 SM00450 Rhodanese Homology Domain A361_28240 SM00450 Rhodanese Homology Domain A361_28245 SM00450 Rhodanese Homology Domain A361_28295 SM00450 Rhodanese Homology Domain A361_28295 SM00849 Metallo-beta-lactamase superfamily A361_28310 SM00450 Rhodanese Homology Domain A361_28315 SM00450 Rhodanese Homology Domain A361_28340 SM00849 Metallo-beta-lactamase superfamily A361_28345 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor A361_28345 SM00450 Rhodanese Homology Domain A361_28350 SM00857 Resolvase, N terminal domain A361_28365 SM00382 ATPases associated with a variety of cellular activities A361_28425 SM00507 HNH nucleases A361_28445 SM00411 bacterial (prokaryotic) histone like domain A361_28480 SM00507 HNH nucleases A361_28500 SM00530 Helix-turn-helix XRE-family like proteins A361_28510 SM00480 DNA polymerase III beta subunit A361_28585 SM00316 Ribosomal protein S1-like RNA-binding domain A361_28595 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. A361_28645 SM00089 Repeats in polycystic kidney disease 1 (PKD1) and other proteins A361_28655 SM00028 Tetratricopeptide repeats A361_28655 SM00530 Helix-turn-helix XRE-family like proteins A361_28805 SM00382 ATPases associated with a variety of cellular activities A361_28840 SM00507 HNH nucleases A361_28900 SM00382 ATPases associated with a variety of cellular activities A361_28935 SM00860 SMI1 / KNR4 family A361_28985 SM00318 Staphylococcal nuclease homologues A361_29010 SM00422 helix_turn_helix, mercury resistance A361_29030 SM00382 ATPases associated with a variety of cellular activities A361_29075 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain A361_29090 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor