locus-tag	class	description
LMD38_00005	COG1595	DNA-templated transcription, initiation
LMD38_00025	COG2234	aminopeptidase activity
LMD38_00035	COG0024	Methionine aminopeptidase
LMD38_00040	COG1131	(ABC) transporter
LMD38_00045	COG0842	Transport permease protein
LMD38_00050	COG4585	Histidine kinase
LMD38_00055	COG2197	response regulator
LMD38_00075	COG3300	MHYT domain
LMD38_00075	COG5001	Diguanylate cyclase
LMD38_00085	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_00090	COG2181	nitrate reductase activity
LMD38_00090	COG0247	lactate metabolic process
LMD38_00100	COG1250	3-hydroxyacyl-CoA dehydrogenase
LMD38_00105	COG1960	acyl-CoA dehydrogenase activity
LMD38_00110	COG1960	acyl-CoA dehydrogenase activity
LMD38_00130	COG0484	heat shock protein binding
LMD38_00135	COG4821	SIS domain
LMD38_00155	COG1494	fructose-1,6-bisphosphatase
LMD38_00160	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
LMD38_00185	COG2890	protein-(glutamine-N5) methyltransferase activity
LMD38_00200	COG0009	L-threonylcarbamoyladenylate synthase
LMD38_00220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LMD38_00225	COG2259	Doxx family
LMD38_00230	COG2190	(PTS) system
LMD38_00240	COG0698	ribose 5-phosphate isomerase
LMD38_00275	COG0356	it plays a direct role in the translocation of protons across the membrane
LMD38_00325	COG3300	MHYT domain
LMD38_00325	COG5001	Diguanylate cyclase
LMD38_00340	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMD38_00360	COG0839	Belongs to the complex I subunit 6 family
LMD38_00370	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LMD38_00375	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
LMD38_00380	COG1007	ATP synthesis coupled electron transport
LMD38_00385	COG4836	Membrane
LMD38_00400	COG2385	sporulation resulting in formation of a cellular spore
LMD38_00405	COG3279	Response regulator of the LytR AlgR family
LMD38_00420	COG0739	heme binding
LMD38_00430	COG1609	Transcriptional regulator
LMD38_00445	COG0489	protein tyrosine kinase activity
LMD38_00450	COG3944	biosynthesis protein
LMD38_00455	COG0489	protein tyrosine kinase activity
LMD38_00460	COG4464	protein tyrosine phosphatase activity
LMD38_00465	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LMD38_00475	COG0463	Glycosyl transferase, family 2
LMD38_00495	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
LMD38_00495	COG0662	Cupin 2, conserved barrel domain protein
LMD38_00500	COG1482	cell wall glycoprotein biosynthetic process
LMD38_00505	COG1316	TRANSCRIPTIONal
LMD38_00515	COG3475	LICD family
LMD38_00535	COG0697	spore germination
LMD38_00540	COG4750	Nucleotidyl transferase
LMD38_00545	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LMD38_00550	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LMD38_00555	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMD38_00560	COG3711	transcriptional antiterminator
LMD38_00560	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_00565	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_00565	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMD38_00565	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMD38_00570	COG1482	cell wall glycoprotein biosynthetic process
LMD38_00575	COG0745	RESPONSE REGULATOR receiver
LMD38_00580	COG2205	protein histidine kinase activity
LMD38_00605	COG1136	(ABC) transporter
LMD38_00610	COG0577	efflux transmembrane transporter activity
LMD38_00655	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LMD38_00660	COG4715	Zinc finger, swim domain protein
LMD38_00685	COG3584	3D domain protein
LMD38_00685	COG1388	LysM domain
LMD38_00690	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LMD38_00695	COG1215	transferase activity, transferring glycosyl groups
LMD38_00705	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_00710	COG0791	NLP P60 protein
LMD38_00710	COG1388	LysM domain
LMD38_00720	COG1368	sulfuric ester hydrolase activity
LMD38_00730	COG2389	metal-binding protein
LMD38_00740	COG1620	l-lactate permease
LMD38_00755	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LMD38_00760	COG1294	oxidase, subunit
LMD38_00765	COG1271	oxidase subunit
LMD38_00775	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
LMD38_00780	COG0583	DNA-binding transcription factor activity
LMD38_00785	COG1511	domain protein
LMD38_00805	COG0346	lactoylglutathione lyase activity
LMD38_00815	COG1301	dicarboxylic acid transport
LMD38_00820	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LMD38_00830	COG1447	Phosphotransferase system cellobiose-specific component IIA
LMD38_00850	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LMD38_00855	COG1447	Phosphotransferase system cellobiose-specific component IIA
LMD38_00860	COG1486	melibiose metabolic process
LMD38_00880	COG3933	PFAM sigma-54 factor interaction domain-containing protein
LMD38_00880	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
LMD38_00890	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
LMD38_00895	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
LMD38_00900	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
LMD38_00905	COG1316	TRANSCRIPTIONal
LMD38_00910	COG1739	Uncharacterized protein family UPF0029
LMD38_00915	COG1307	EDD domain protein, DegV family
LMD38_00920	COG1733	regulation of RNA biosynthetic process
LMD38_00925	COG0791	NLP P60 protein
LMD38_00925	COG1388	LysM domain
LMD38_00930	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
LMD38_00935	COG1040	competence protein
LMD38_00940	COG1278	Cold shock
LMD38_00945	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
LMD38_00975	COG1131	(ABC) transporter
LMD38_01000	COG2884	Cell division ATP-binding protein ftsE
LMD38_01005	COG2177	Part of the ABC transporter FtsEX involved in
LMD38_01010	COG0793	Belongs to the peptidase S41A family
LMD38_01010	COG3409	Peptidoglycan-binding domain 1 protein
LMD38_01015	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LMD38_01030	COG0488	(ABC) transporter
LMD38_01035	COG0655	NAD(P)H dehydrogenase (quinone) activity
LMD38_01045	COG0583	DNA-binding transcription factor activity
LMD38_01075	COG0789	Transcriptional regulator
LMD38_01105	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LMD38_01120	COG1950	PFAM Membrane protein of
LMD38_01140	COG0110	maltose O-acetyltransferase activity
LMD38_01145	COG0457	Tetratricopeptide repeat
LMD38_01150	COG0492	ferredoxin-NADP+ reductase activity
LMD38_01160	COG1051	belongs to the nudix hydrolase family
LMD38_01170	COG0391	Required for morphogenesis under gluconeogenic growth conditions
LMD38_01180	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_01190	COG2323	membrane
LMD38_01205	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMD38_01290	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
LMD38_01305	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LMD38_01340	COG1346	cytolysis
LMD38_01345	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LMD38_01350	COG1647	Serine aminopeptidase, S33
LMD38_01355	COG0557	exoribonuclease II activity
LMD38_01410	COG2814	Major facilitator Superfamily
LMD38_01420	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_01440	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
LMD38_01450	COG0840	transmembrane signaling receptor activity
LMD38_01450	COG3290	protein histidine kinase activity
LMD38_01460	COG0812	UDP-N-acetylmuramate dehydrogenase activity
LMD38_01465	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
LMD38_01470	COG1252	NADH dehydrogenase
LMD38_01480	COG1733	regulation of RNA biosynthetic process
LMD38_01485	COG2814	Major facilitator Superfamily
LMD38_01490	COG0656	L-ascorbic acid biosynthetic process
LMD38_01505	COG2910	NAD(P)H-binding
LMD38_01510	COG1115	amino acid carrier protein
LMD38_01515	COG1115	amino acid carrier protein
LMD38_01520	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_01525	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_01545	COG1611	Belongs to the LOG family
LMD38_01560	COG0783	Belongs to the Dps family
LMD38_01565	COG1115	amino acid carrier protein
LMD38_01570	COG0490	domain, Protein
LMD38_01575	COG0475	glutathione-regulated potassium exporter activity
LMD38_01590	COG1741	Belongs to the pirin family
LMD38_01595	COG3227	Zinc metalloprotease (Elastase)
LMD38_01600	COG2151	metal-sulfur cluster biosynthetic enzyme
LMD38_01605	COG0840	transmembrane signaling receptor activity
LMD38_01635	COG5002	protein histidine kinase activity
LMD38_01640	COG0745	RESPONSE REGULATOR receiver
LMD38_01645	COG1376	ErfK ybiS ycfS ynhG family protein
LMD38_01655	COG0586	Pfam SNARE associated Golgi protein
LMD38_01680	COG1131	(ABC) transporter
LMD38_01690	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LMD38_01695	COG0745	RESPONSE REGULATOR receiver
LMD38_01700	COG5002	protein histidine kinase activity
LMD38_01710	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_01735	COG0531	amino acid
LMD38_01740	COG2814	Major facilitator Superfamily
LMD38_01755	COG0840	transmembrane signaling receptor activity
LMD38_01760	COG0011	TIGRFAM Protein of
LMD38_01775	COG1686	Belongs to the peptidase S11 family
LMD38_01785	COG1024	Enoyl-CoA hydratase
LMD38_01785	COG1250	3-hydroxyacyl-CoA dehydrogenase
LMD38_01790	COG0183	Belongs to the thiolase family
LMD38_01795	COG1960	acyl-CoA dehydrogenase activity
LMD38_01800	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_01805	COG1309	transcriptional regulator
LMD38_01815	COG1396	sequence-specific DNA binding
LMD38_01860	COG1393	Belongs to the ArsC family
LMD38_01870	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LMD38_01875	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_01890	COG2011	ABC-type metal ion transport system permease component
LMD38_01895	COG1464	Belongs to the NlpA lipoprotein family
LMD38_01900	COG1464	Belongs to the NlpA lipoprotein family
LMD38_01905	COG0396	ATPase activity
LMD38_01910	COG0719	Fe-S assembly protein
LMD38_01915	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
LMD38_01920	COG0822	iron-sulfur transferase activity
LMD38_01925	COG0719	Fe-S assembly protein
LMD38_01935	COG1695	Transcriptional regulator
LMD38_01940	COG0737	Belongs to the 5'-nucleotidase family
LMD38_01945	COG3377	Domain of unknown function (DUF1805)
LMD38_01955	COG0739	heme binding
LMD38_01980	COG4377	Putative membrane peptidase family (DUF2324)
LMD38_01985	COG0789	Transcriptional regulator
LMD38_01995	COG4470	Protein conserved in bacteria
LMD38_02010	COG1494	fructose-1,6-bisphosphatase
LMD38_02015	COG2445	Protein of unknown function DUF86
LMD38_02025	COG0647	UMP catabolic process
LMD38_02030	COG2249	NAD(P)H dehydrogenase (quinone) activity
LMD38_02040	COG1358	cellular component organization or biogenesis
LMD38_02060	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
LMD38_02065	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LMD38_02075	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
LMD38_02080	COG4837	Protein of unknown function (DUF1462)
LMD38_02130	COG2824	Alkylphosphonate utilization operon protein PhnA
LMD38_02135	COG0390	transport system, permease component
LMD38_02150	COG1252	NADH dehydrogenase
LMD38_02165	COG0316	Belongs to the HesB IscA family
LMD38_02180	COG4122	O-methyltransferase activity
LMD38_02190	COG1683	Conserved Protein
LMD38_02205	COG3708	Transcriptional regulator
LMD38_02215	COG1252	NADH dehydrogenase
LMD38_02230	COG3584	3D domain protein
LMD38_02245	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
LMD38_02250	COG1210	Utp--glucose-1-phosphate uridylyltransferase
LMD38_02255	COG1268	BioY protein
LMD38_02265	COG2050	protein possibly involved in aromatic compounds catabolism
LMD38_02285	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LMD38_02290	COG5018	Exonuclease
LMD38_02310	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
LMD38_02320	COG2267	carboxylic ester hydrolase activity
LMD38_02325	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LMD38_02330	COG1522	sequence-specific DNA binding
LMD38_02335	COG0436	Aminotransferase
LMD38_02340	COG1098	S1 RNA binding domain
LMD38_02345	COG2155	Conserved Protein
LMD38_02360	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
LMD38_02365	COG1285	pathogenesis
LMD38_02400	COG0544	peptidyl-prolyl cis-trans isomerase activity
LMD38_02505	COG1404	Belongs to the peptidase S8 family
LMD38_02525	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
LMD38_02535	COG0058	SHG alpha-glucan phosphorylase activity
LMD38_02560	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
LMD38_02565	COG1575	Belongs to the MenA family. Type 1 subfamily
LMD38_02570	COG1169	isochorismate synthase
LMD38_02580	COG0596	Alpha beta hydrolase
LMD38_02585	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
LMD38_02595	COG4948	Mandelate Racemase Muconate Lactonizing
LMD38_02625	COG3964	amidohydrolase
LMD38_02645	COG2188	Transcriptional regulator
LMD38_02670	COG0577	efflux transmembrane transporter activity
LMD38_02675	COG1136	(ABC) transporter
LMD38_02680	COG0577	efflux transmembrane transporter activity
LMD38_02685	COG0577	efflux transmembrane transporter activity
LMD38_02690	COG2205	protein histidine kinase activity
LMD38_02695	COG0745	RESPONSE REGULATOR receiver
LMD38_02700	COG0640	Transcriptional regulator
LMD38_02705	COG5658	integral membrane protein
LMD38_02710	COG3708	Transcriptional regulator
LMD38_02710	COG2207	Transcriptional regulator
LMD38_02715	COG1136	(ABC) transporter
LMD38_02720	COG0577	efflux transmembrane transporter activity
LMD38_02730	COG0586	Pfam SNARE associated Golgi protein
LMD38_02745	COG1136	(ABC) transporter
LMD38_02750	COG0577	efflux transmembrane transporter activity
LMD38_02770	COG1597	lipid kinase activity
LMD38_02775	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LMD38_02805	COG0745	RESPONSE REGULATOR receiver
LMD38_02810	COG5002	protein histidine kinase activity
LMD38_02840	COG1842	Phage shock protein A
LMD38_02865	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_02885	COG1294	oxidase, subunit
LMD38_02890	COG1271	oxidase subunit
LMD38_02895	COG0288	reversible hydration of carbon dioxide
LMD38_02930	COG0494	nUDIX hydrolase
LMD38_02955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMD38_02960	COG1116	anion transmembrane transporter activity
LMD38_02965	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LMD38_02990	COG1368	sulfuric ester hydrolase activity
LMD38_02995	COG2267	carboxylic ester hydrolase activity
LMD38_03000	COG4191	Histidine kinase
LMD38_03005	COG5002	protein histidine kinase activity
LMD38_03030	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LMD38_03075	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_03090	COG0521	Mo-molybdopterin cofactor biosynthetic process
LMD38_03100	COG0438	transferase activity, transferring glycosyl groups
LMD38_03105	COG0671	phosphoesterase, PA-phosphatase related
LMD38_03110	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
LMD38_03115	COG2267	carboxylic ester hydrolase activity
LMD38_03140	COG1794	racemase activity, acting on amino acids and derivatives
LMD38_03155	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
LMD38_03160	COG1242	4 iron, 4 sulfur cluster binding
LMD38_03180	COG1136	(ABC) transporter
LMD38_03190	COG0582	viral genome integration into host DNA
LMD38_03195	COG0490	domain, Protein
LMD38_03200	COG0475	glutathione-regulated potassium exporter activity
LMD38_03205	COG2814	Major facilitator Superfamily
LMD38_03250	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
LMD38_03260	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_03280	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
LMD38_03285	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LMD38_03295	COG0303	'Molybdopterin
LMD38_03300	COG1763	Mo-molybdopterin cofactor biosynthetic process
LMD38_03310	COG0314	molybdopterin synthase activity
LMD38_03335	COG1329	Transcriptional regulator
LMD38_03355	COG3832	glyoxalase III activity
LMD38_03365	COG2814	Major facilitator Superfamily
LMD38_03370	COG2081	HI0933 family
LMD38_03375	COG2244	polysaccharide biosynthetic process
LMD38_03380	COG1187	pseudouridine synthase activity
LMD38_03385	COG1349	DNA-binding transcription factor activity
LMD38_03390	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LMD38_03400	COG1523	belongs to the glycosyl hydrolase 13 family
LMD38_03405	COG0510	thiamine kinase activity
LMD38_03420	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_03430	COG1363	Peptidase, m42
LMD38_03435	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
LMD38_03440	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_03450	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMD38_03465	COG1674	ftsk spoiiie
LMD38_03480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_03505	COG2309	aminopeptidase activity
LMD38_03515	COG3118	belongs to the thioredoxin family
LMD38_03520	COG4851	CamS sex pheromone cAM373 precursor
LMD38_03525	COG1609	Transcriptional regulator
LMD38_03575	COG0123	including yeast histone deacetylase and acetoin utilization protein
LMD38_03580	COG0517	IMP dehydrogenase activity
LMD38_03585	COG0454	-acetyltransferase
LMD38_03590	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LMD38_03640	COG1956	GAF domain-containing protein
LMD38_03645	COG1309	transcriptional regulator
LMD38_03650	COG0697	spore germination
LMD38_03655	COG0583	DNA-binding transcription factor activity
LMD38_03665	COG1104	cysteine desulfurase activity
LMD38_03680	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LMD38_03690	COG1574	metal-dependent hydrolase with the TIM-barrel fold
LMD38_03705	COG3874	Sporulation protein YtfJ
LMD38_03710	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
LMD38_03715	COG0827	DNA restriction-modification system
LMD38_03740	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_03780	COG0589	response to stress
LMD38_03785	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_03800	COG1476	TRANSCRIPTIONal
LMD38_03810	COG0662	Cupin 2, conserved barrel domain protein
LMD38_03850	COG0006	proline dipeptidase activity
LMD38_03865	COG4109	DRTGG domain
LMD38_03875	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LMD38_03890	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
LMD38_03905	COG0587	DNA-directed DNA polymerase activity
LMD38_03910	COG0281	malic enzyme
LMD38_03915	COG1725	Transcriptional regulator
LMD38_03940	COG3030	protein affecting phage T7 exclusion by the F plasmid
LMD38_03945	COG0628	permease
LMD38_03955	COG0372	Belongs to the citrate synthase family
LMD38_03960	COG0538	isocitrate dehydrogenase activity
LMD38_03980	COG0745	RESPONSE REGULATOR receiver
LMD38_03985	COG5002	protein histidine kinase activity
LMD38_03990	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMD38_03990	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMD38_04000	COG1971	Probably functions as a manganese efflux pump
LMD38_04010	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
LMD38_04015	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
LMD38_04025	COG3611	Membrane attachment protein
LMD38_04030	COG1484	DNA-dependent DNA replication
LMD38_04040	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LMD38_04065	COG1363	Peptidase, m42
LMD38_04070	COG1309	transcriptional regulator
LMD38_04075	COG1566	PFAM secretion protein HlyD family protein
LMD38_04080	COG2814	Major facilitator Superfamily
LMD38_04100	COG1418	mRNA catabolic process
LMD38_04110	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMD38_04155	COG1286	toxin biosynthetic process
LMD38_04160	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LMD38_04160	COG1796	DNA polymerase
LMD38_04170	COG1187	pseudouridine synthase activity
LMD38_04175	COG1114	Component of the transport system for branched-chain amino acids
LMD38_04180	COG5386	Cell surface protein
LMD38_04185	COG5386	Cell surface protein
LMD38_04200	COG1120	ATPase activity
LMD38_04205	COG4509	Sortase family
LMD38_04215	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
LMD38_04220	COG4895	conserved protein (DUF2196)
LMD38_04230	COG0745	RESPONSE REGULATOR receiver
LMD38_04235	COG2205	protein histidine kinase activity
LMD38_04240	COG1131	(ABC) transporter
LMD38_04265	COG2318	DinB family
LMD38_04280	COG0318	PFAM AMP-dependent synthetase and ligase
LMD38_04285	COG1309	transcriptional regulator
LMD38_04290	COG1024	Enoyl-CoA hydratase
LMD38_04295	COG2086	electron transfer activity
LMD38_04300	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
LMD38_04305	COG3118	belongs to the thioredoxin family
LMD38_04315	COG1719	4-vinyl reductase, 4VR
LMD38_04320	COG2009	succinate dehydrogenase
LMD38_04325	COG1053	succinate dehydrogenase
LMD38_04330	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
LMD38_04335	COG0824	Thioesterase
LMD38_04340	COG1876	peptidase activity
LMD38_04345	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LMD38_04350	COG1360	Flagellar Motor Protein
LMD38_04355	COG2503	HAD superfamily, subfamily IIIB (Acid phosphatase)
LMD38_04360	COG4152	abc transporter atp-binding protein
LMD38_04365	COG1668	transmembrane transport
LMD38_04370	COG1959	2 iron, 2 sulfur cluster binding
LMD38_04380	COG0697	spore germination
LMD38_04385	COG1396	sequence-specific DNA binding
LMD38_04390	COG1983	PspC domain protein
LMD38_04395	COG0402	S-adenosylhomocysteine deaminase activity
LMD38_04400	COG2233	PERMEase
LMD38_04405	COG2197	response regulator
LMD38_04445	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LMD38_04445	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LMD38_04490	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMD38_04560	COG1309	transcriptional regulator
LMD38_04570	COG2814	Major facilitator Superfamily
LMD38_04580	COG5401	PFAM Sporulation and spore germination
LMD38_04595	COG0622	Phosphoesterase
LMD38_04610	COG0457	Tetratricopeptide repeat
LMD38_04655	COG0470	DNA polymerase III
LMD38_04655	COG1067	ATP-dependent peptidase activity
LMD38_04670	COG1764	response to oxidative stress
LMD38_04675	COG1846	Transcriptional regulator
LMD38_04685	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LMD38_04695	COG1587	Uroporphyrinogen-III synthase
LMD38_04700	COG0113	porphobilinogen synthase activity
LMD38_04710	COG1388	LysM domain
LMD38_04725	COG0285	dihydrofolate synthase activity
LMD38_04745	COG1077	Cell shape determining protein MreB Mrl
LMD38_04765	COG2894	cell division
LMD38_04770	COG0739	heme binding
LMD38_04775	COG1994	Peptidase M50
LMD38_04780	COG1530	ribonuclease E activity
LMD38_04785	COG0261	This protein binds to 23S rRNA in the presence of protein L20
LMD38_04790	COG2868	ribosomal protein
LMD38_04800	COG3290	protein histidine kinase activity
LMD38_04810	COG0745	RESPONSE REGULATOR receiver
LMD38_04815	COG5002	protein histidine kinase activity
LMD38_04820	COG1136	(ABC) transporter
LMD38_04825	COG0577	efflux transmembrane transporter activity
LMD38_04830	COG0577	efflux transmembrane transporter activity
LMD38_04835	COG0077	Prephenate dehydratase
LMD38_04845	COG2258	MOSC domain
LMD38_04850	COG1827	regulation of RNA biosynthetic process
LMD38_04855	COG1104	cysteine desulfurase activity
LMD38_04860	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
LMD38_04865	COG0157	Belongs to the NadC ModD family
LMD38_04920	COG1862	Preprotein translocase
LMD38_04930	COG2323	membrane
LMD38_04935	COG2244	polysaccharide biosynthetic process
LMD38_04945	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LMD38_04945	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
LMD38_04950	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LMD38_04955	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
LMD38_04955	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
LMD38_04965	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
LMD38_05000	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
LMD38_05010	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
LMD38_05015	COG1959	2 iron, 2 sulfur cluster binding
LMD38_05020	COG1104	cysteine desulfurase activity
LMD38_05035	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
LMD38_05055	COG0628	permease
LMD38_05085	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
LMD38_05090	COG4122	O-methyltransferase activity
LMD38_05095	COG0826	peptidase U32
LMD38_05100	COG0826	peptidase U32
LMD38_05115	COG0768	penicillin binding
LMD38_05140	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LMD38_05145	COG0626	cystathionine gamma-synthase activity
LMD38_05150	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_05150	COG1454	alcohol dehydrogenase
LMD38_05160	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
LMD38_05200	COG2259	Doxx family
LMD38_05205	COG2514	catechol 2,3-dioxygenase activity
LMD38_05215	COG3186	Phenylalanine-4-hydroxylase
LMD38_05220	COG1404	Belongs to the peptidase S8 family
LMD38_05255	COG2267	carboxylic ester hydrolase activity
LMD38_05265	COG1785	Belongs to the alkaline phosphatase family
LMD38_05275	COG2357	RelA SpoT domain protein
LMD38_05310	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
LMD38_05315	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
LMD38_05325	COG1534	Rna-binding protein
LMD38_05335	COG1713	HD superfamily hydrolase involved in NAD metabolism
LMD38_05340	COG0799	negative regulation of ribosome biogenesis
LMD38_05345	COG2226	methyltransferase
LMD38_05350	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LMD38_05355	COG1596	polysaccharide export
LMD38_05355	COG1555	photosystem II stabilization
LMD38_05360	COG2131	deaminase
LMD38_05365	COG0658	competence protein
LMD38_05365	COG2333	competence protein COMEC
LMD38_05375	COG1466	dna polymerase III delta subunit
LMD38_05400	COG1733	regulation of RNA biosynthetic process
LMD38_05405	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LMD38_05435	COG1385	rRNA (uridine-N3-)-methyltransferase activity
LMD38_05440	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
LMD38_05445	COG0828	Belongs to the bacterial ribosomal protein bS21 family
LMD38_05450	COG1610	YqeY-like protein
LMD38_05465	COG1702	phosphate starvation-inducible protein PhoH
LMD38_05470	COG1480	7TM receptor with intracellular HD hydrolase
LMD38_05480	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
LMD38_05485	COG0295	cytidine deaminase activity
LMD38_05490	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
LMD38_05505	COG0517	IMP dehydrogenase activity
LMD38_05515	COG0358	DNA primase activity
LMD38_05520	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
LMD38_05530	COG2384	SAM-dependent methyltransferase
LMD38_05535	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
LMD38_05565	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_05570	COG1121	(ABC) transporter
LMD38_05575	COG1108	ABC-type Mn2 Zn2 transport systems permease components
LMD38_05580	COG0735	belongs to the Fur family
LMD38_05605	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LMD38_05610	COG0477	Major facilitator Superfamily
LMD38_05615	COG0768	penicillin binding
LMD38_05620	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LMD38_05625	COG0573	inorganic phosphate transmembrane transporter activity
LMD38_05630	COG0581	inorganic phosphate transmembrane transporter activity
LMD38_05640	COG0704	Plays a role in the regulation of phosphate uptake
LMD38_05645	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LMD38_05650	COG0267	Belongs to the bacterial ribosomal protein bL33 family
LMD38_05655	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
LMD38_05660	COG4483	Protein conserved in bacteria
LMD38_05665	COG1940	carbohydrate kinase activity
LMD38_05675	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_05695	COG0626	cystathionine gamma-synthase activity
LMD38_05700	COG0626	cystathionine gamma-synthase activity
LMD38_05705	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
LMD38_05705	COG0646	methionine synthase
LMD38_05710	COG1410	methionine synthase
LMD38_05710	COG0646	methionine synthase
LMD38_05765	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
LMD38_05770	COG1459	type II secretion system
LMD38_05780	COG4970	Tfp pilus assembly protein FimT
LMD38_05845	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LMD38_05875	COG1725	Transcriptional regulator
LMD38_05880	COG1131	(ABC) transporter
LMD38_05920	COG2076	Multidrug Resistance protein
LMD38_05925	COG2076	Multidrug Resistance protein
LMD38_05935	COG1609	Transcriptional regulator
LMD38_05940	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_05945	COG0095	Lipoate-protein ligase
LMD38_05965	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
LMD38_05975	COG3872	metal-dependent enzyme
LMD38_05990	COG0006	proline dipeptidase activity
LMD38_06015	COG3854	ATPases associated with a variety of cellular activities
LMD38_06060	COG0511	ligase activity, forming carbon-carbon bonds
LMD38_06065	COG0439	Biotin carboxylase
LMD38_06070	COG1302	Protein conserved in bacteria
LMD38_06095	COG0142	geranyltranstransferase activity
LMD38_06105	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
LMD38_06115	COG0497	DNA recombination
LMD38_06120	COG0750	zinc metalloprotease
LMD38_06125	COG0745	RESPONSE REGULATOR receiver
LMD38_06140	COG0322	excinuclease ABC activity
LMD38_06225	COG3093	addiction module antidote protein HigA
LMD38_06230	COG0584	glycerophosphoryl diester phosphodiesterase
LMD38_06240	COG3290	protein histidine kinase activity
LMD38_06240	COG3829	transcription factor binding
LMD38_06245	COG0280	phosphate acetyltransferase
LMD38_06260	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMD38_06265	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LMD38_06270	COG0022	dehydrogenase e1 component
LMD38_06275	COG0508	dehydrogenase complex catalyzes the overall conversion of
LMD38_06280	COG0772	Belongs to the SEDS family
LMD38_06285	COG2323	membrane
LMD38_06305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_06310	COG0765	amino acid transport
LMD38_06315	COG1126	abc transporter atp-binding protein
LMD38_06320	COG4129	membrane
LMD38_06325	COG1376	ErfK ybiS ycfS ynhG family protein
LMD38_06340	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_06345	COG2195	Cleaves the N-terminal amino acid of tripeptides
LMD38_06360	COG1285	pathogenesis
LMD38_06385	COG1760	l-serine dehydratase
LMD38_06390	COG1760	l-serine dehydratase
LMD38_06395	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LMD38_06400	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_06405	COG0300	oxidoreductase activity
LMD38_06430	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LMD38_06450	COG1522	sequence-specific DNA binding
LMD38_06460	COG0737	Belongs to the 5'-nucleotidase family
LMD38_06465	COG1757	Na H antiporter
LMD38_06475	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LMD38_06490	COG1073	alpha beta
LMD38_06490	COG2226	methyltransferase
LMD38_06495	COG4106	trans-aconitate 2-methyltransferase activity
LMD38_06520	COG0307	riboflavin synthase, alpha
LMD38_06525	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LMD38_06525	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
LMD38_06540	COG1073	alpha beta
LMD38_06545	COG0456	acetyltransferase
LMD38_06550	COG1609	Transcriptional regulator
LMD38_06555	COG2056	Na+-H+ antiporter family
LMD38_06560	COG0596	Alpha beta hydrolase
LMD38_06570	COG0737	Belongs to the 5'-nucleotidase family
LMD38_06570	COG4085	toxin activity
LMD38_06570	COG1525	nuclease
LMD38_06580	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LMD38_06580	COG0456	acetyltransferase
LMD38_06585	COG0656	L-ascorbic acid biosynthetic process
LMD38_06590	COG0667	Aldo Keto reductase
LMD38_06610	COG1300	Membrane
LMD38_06615	COG0735	belongs to the Fur family
LMD38_06625	COG4974	Belongs to the 'phage' integrase family
LMD38_06650	COG0598	Magnesium transport protein CorA
LMD38_06665	COG1846	Transcriptional regulator
LMD38_06680	COG1131	(ABC) transporter
LMD38_06685	COG1725	Transcriptional regulator
LMD38_06690	COG1686	Belongs to the peptidase S11 family
LMD38_06710	COG0733	neurotransmitter:sodium symporter activity
LMD38_06735	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMD38_06750	COG0697	spore germination
LMD38_06755	COG0561	phosphatase activity
LMD38_06765	COG4086	secreted protein
LMD38_06770	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
LMD38_06780	COG0456	acetyltransferase
LMD38_06785	COG1547	Domain of unknown function (DUF309)
LMD38_06810	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
LMD38_06820	COG2188	Transcriptional regulator
LMD38_06830	COG3711	transcriptional antiterminator
LMD38_06835	COG2190	(PTS) system
LMD38_06835	COG1263	PTS System
LMD38_06835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_06860	COG0778	Nitroreductase
LMD38_06865	COG2199	diguanylate cyclase activity
LMD38_06875	COG2084	Dehydrogenase
LMD38_06910	COG0436	Aminotransferase
LMD38_06915	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
LMD38_06940	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_06945	COG1695	Transcriptional regulator
LMD38_06980	COG0183	Belongs to the thiolase family
LMD38_06985	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMD38_07025	COG3842	ATPase activity
LMD38_07030	COG0366	Alpha amylase catalytic
LMD38_07040	COG2182	Extracellular solute-binding protein
LMD38_07045	COG1175	transmembrane transport
LMD38_07050	COG3833	ABC-type maltose transport systems, permease component
LMD38_07055	COG1609	Transcriptional regulator
LMD38_07060	COG0436	Aminotransferase
LMD38_07070	COG2205	protein histidine kinase activity
LMD38_07080	COG3209	COG3209 Rhs family protein
LMD38_07105	COG2814	Major facilitator Superfamily
LMD38_07140	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
LMD38_07150	COG1408	metallophosphoesterase
LMD38_07155	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_07160	COG2200	EAL domain
LMD38_07175	COG4703	Protein of unknown function (DUF1797)
LMD38_07185	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
LMD38_07195	COG0517	IMP dehydrogenase activity
LMD38_07200	COG0583	DNA-binding transcription factor activity
LMD38_07220	COG0569	domain protein
LMD38_07225	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMD38_07235	COG0561	phosphatase activity
LMD38_07240	COG0242	peptide deformylase activity
LMD38_07250	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LMD38_07255	COG0022	dehydrogenase e1 component
LMD38_07305	COG1982	Orn Lys Arg decarboxylase major
LMD38_07325	COG0483	inositol monophosphate 1-phosphatase activity
LMD38_07335	COG1217	gtp-binding protein TYPA
LMD38_07350	COG4896	Protein conserved in bacteria
LMD38_07360	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
LMD38_07365	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
LMD38_07375	COG0772	Belongs to the SEDS family
LMD38_07380	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
LMD38_07400	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LMD38_07415	COG3336	cytochrome c oxidase
LMD38_07425	COG3344	reverse transcriptase
LMD38_07440	COG2340	Cysteine-rich secretory protein family
LMD38_07455	COG0406	alpha-ribazole phosphatase activity
LMD38_07460	COG3679	Belongs to the UPF0342 family
LMD38_07475	COG0742	ribosomal rna small subunit methyltransferase
LMD38_07485	COG3314	Sporulation integral membrane protein YlbJ
LMD38_07490	COG1752	Esterase of the alpha-beta hydrolase superfamily
LMD38_07495	COG3480	Lon protease (S16) C-terminal proteolytic domain
LMD38_07505	COG1399	metal-binding, possibly nucleic acid-binding protein
LMD38_07510	COG0333	Belongs to the bacterial ribosomal protein bL32 family
LMD38_07525	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LMD38_07540	COG4839	cell division protein FtsL
LMD38_07545	COG0768	penicillin binding
LMD38_07550	COG0768	penicillin binding
LMD38_07555	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
LMD38_07570	COG0772	Belongs to the SEDS family
LMD38_07585	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
LMD38_07590	COG0849	cell division
LMD38_07595	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
LMD38_07605	COG1191	sigma factor activity
LMD38_07610	COG1191	sigma factor activity
LMD38_07615	COG1873	PFAM PRC-barrel domain
LMD38_07625	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
LMD38_07635	COG0762	integral membrane protein
LMD38_07640	COG2302	S4 RNA-binding domain
LMD38_07645	COG3599	regulation of cell shape
LMD38_07665	COG0564	pseudouridine synthase activity
LMD38_07725	COG3069	C4-dicarboxylate transmembrane transporter activity
LMD38_07740	COG0006	proline dipeptidase activity
LMD38_07755	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LMD38_07760	COG1561	YicC-like family, N-terminal region
LMD38_07780	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LMD38_07785	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
LMD38_07790	COG0242	peptide deformylase activity
LMD38_07800	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
LMD38_07800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
LMD38_07810	COG0631	protein serine/threonine phosphatase activity
LMD38_07815	COG2815	serine threonine protein kinase
LMD38_07815	COG0515	serine threonine protein kinase
LMD38_07825	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
LMD38_07830	COG1564	THIamine pyrophosphokinase
LMD38_07845	COG1302	Protein conserved in bacteria
LMD38_07850	COG1461	Dihydroxyacetone kinase
LMD38_07855	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
LMD38_07870	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
LMD38_07875	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_07880	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LMD38_07890	COG1196	nuclear chromosome segregation
LMD38_07895	COG0552	protein localization to endoplasmic reticulum
LMD38_07905	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
LMD38_07915	COG1837	Belongs to the UPF0109 family
LMD38_07955	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
LMD38_07960	COG0758	DNA mediated transformation
LMD38_07965	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LMD38_07975	COG4974	Belongs to the 'phage' integrase family
LMD38_08005	COG0528	UMP kinase activity
LMD38_08020	COG4589	Belongs to the CDS family
LMD38_08030	COG0750	zinc metalloprotease
LMD38_08050	COG0195	Participates in both transcription termination and antitermination
LMD38_08055	COG2740	Nucleic-acid-binding protein implicated in transcription termination
LMD38_08060	COG1358	cellular component organization or biogenesis
LMD38_08070	COG1550	Protein conserved in bacteria
LMD38_08085	COG0196	riboflavin kinase activity
LMD38_08100	COG0726	polysaccharide deacetylase
LMD38_08105	COG0612	Peptidase, M16
LMD38_08110	COG1873	PFAM PRC-barrel domain
LMD38_08115	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
LMD38_08120	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
LMD38_08125	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LMD38_08130	COG0527	aspartate kinase activity
LMD38_08140	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMD38_08145	COG0740	serine-type endopeptidase activity
LMD38_08155	COG1674	ftsk spoiiie
LMD38_08160	COG2188	Transcriptional regulator
LMD38_08165	COG1744	ABC transporter substrate-binding protein PnrA-like
LMD38_08170	COG3845	ABC transporter
LMD38_08175	COG4603	Belongs to the binding-protein-dependent transport system permease family
LMD38_08180	COG1079	Belongs to the binding-protein-dependent transport system permease family
LMD38_08185	COG0612	Peptidase, M16
LMD38_08190	COG0612	Peptidase, M16
LMD38_08195	COG0300	oxidoreductase activity
LMD38_08210	COG1426	Protein conserved in bacteria
LMD38_08215	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
LMD38_08240	COG1692	metallophosphoesterase
LMD38_08245	COG2359	stage V sporulation protein S
LMD38_08255	COG0674	pyruvate-flavodoxin oxidoreductase activity
LMD38_08255	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
LMD38_08260	COG1013	pyruvate-flavodoxin oxidoreductase activity
LMD38_08270	COG4550	Control of competence regulator ComK, YlbF/YmcA
LMD38_08290	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
LMD38_08300	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LMD38_08305	COG1368	sulfuric ester hydrolase activity
LMD38_08315	COG3773	Cell wall hydrolase
LMD38_08335	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_08375	COG5001	Diguanylate cyclase
LMD38_08375	COG3300	MHYT domain
LMD38_08380	COG0346	lactoylglutathione lyase activity
LMD38_08400	COG2364	Membrane
LMD38_08410	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LMD38_08415	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LMD38_08420	COG2169	Transcriptional regulator
LMD38_08430	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_08435	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_08440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_08445	COG1120	ATPase activity
LMD38_08450	COG2819	hydrolase of the alpha beta superfamily
LMD38_08470	COG1230	cation diffusion facilitator family transporter
LMD38_08480	COG1937	Protein conserved in bacteria
LMD38_08485	COG2608	mercury ion transmembrane transporter activity
LMD38_08490	COG2217	Heavy metal translocating P-type atpase
LMD38_08505	COG2116	formate transmembrane transporter activity
LMD38_08510	COG1408	metallophosphoesterase
LMD38_08520	COG1113	amino acid transport
LMD38_08530	COG2322	membrane
LMD38_08535	COG1979	alcohol dehydrogenase
LMD38_08540	COG1349	DNA-binding transcription factor activity
LMD38_08545	COG1105	Belongs to the carbohydrate kinase PfkB family
LMD38_08550	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMD38_08550	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
LMD38_08550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_08555	COG1388	LysM domain
LMD38_08555	COG3584	3D domain protein
LMD38_08585	COG0464	growth
LMD38_08590	COG2860	membrane
LMD38_08595	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LMD38_08600	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
LMD38_08605	COG0789	Transcriptional regulator
LMD38_08610	COG0174	glutamine synthetase
LMD38_08615	COG1695	Transcriptional regulator
LMD38_08635	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LMD38_08645	COG0737	Belongs to the 5'-nucleotidase family
LMD38_08660	COG3639	organic phosphonate transmembrane transporter activity
LMD38_08685	COG1132	(ABC) transporter
LMD38_08690	COG1132	(ABC) transporter
LMD38_08710	COG0730	response to heat
LMD38_08725	COG1346	cytolysis
LMD38_08735	COG0583	DNA-binding transcription factor activity
LMD38_08745	COG1131	(ABC) transporter
LMD38_08755	COG1473	amidohydrolase
LMD38_08765	COG0785	Cytochrome C biogenesis protein
LMD38_08770	COG4846	Membrane protein involved in cytochrome C biogenesis
LMD38_08780	COG3344	reverse transcriptase
LMD38_08815	COG2226	methyltransferase
LMD38_08840	COG0010	Belongs to the arginase family
LMD38_08845	COG1902	pentaerythritol trinitrate reductase activity
LMD38_08850	COG0069	glutamate synthase activity
LMD38_08860	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMD38_08865	COG0346	lactoylglutathione lyase activity
LMD38_08870	COG0400	carboxylic ester hydrolase activity
LMD38_08875	COG5002	protein histidine kinase activity
LMD38_08885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_08925	COG1396	sequence-specific DNA binding
LMD38_08940	COG0318	PFAM AMP-dependent synthetase and ligase
LMD38_08945	COG1268	BioY protein
LMD38_08950	COG0318	PFAM AMP-dependent synthetase and ligase
LMD38_08955	COG0183	Belongs to the thiolase family
LMD38_08980	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LMD38_08995	COG2211	Major facilitator Superfamily
LMD38_09025	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
LMD38_09030	COG1132	(ABC) transporter
LMD38_09040	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_09070	COG0824	Thioesterase
LMD38_09075	COG4841	protein insertion into membrane
LMD38_09095	COG0745	RESPONSE REGULATOR receiver
LMD38_09100	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LMD38_09105	COG1832	CoA-binding protein
LMD38_09110	COG0187	DNA topoisomerase II activity
LMD38_09115	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMD38_09120	COG0673	inositol 2-dehydrogenase activity
LMD38_09140	COG1131	(ABC) transporter
LMD38_09150	COG0346	lactoylglutathione lyase activity
LMD38_09155	COG1595	DNA-templated transcription, initiation
LMD38_09165	COG1316	TRANSCRIPTIONal
LMD38_09170	COG1301	dicarboxylic acid transport
LMD38_09175	COG4166	transmembrane transport
LMD38_09180	COG4166	transmembrane transport
LMD38_09185	COG4166	transmembrane transport
LMD38_09190	COG2226	methyltransferase
LMD38_09230	COG0697	spore germination
LMD38_09235	COG3383	formate dehydrogenase (NAD+) activity
LMD38_09240	COG2427	Protein of unknown function (DUF1641)
LMD38_09245	COG5609	conserved protein (DUF2294)
LMD38_09250	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LMD38_09260	COG2116	formate transmembrane transporter activity
LMD38_09265	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LMD38_09270	COG0303	'Molybdopterin
LMD38_09275	COG0314	molybdopterin synthase activity
LMD38_09285	COG0489	protein tyrosine kinase activity
LMD38_09300	COG3326	Membrane
LMD38_09305	COG2962	Rard protein
LMD38_09310	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
LMD38_09315	COG1657	PFAM Prenyltransferase squalene oxidase
LMD38_09325	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_09370	COG4145	pantothenate transmembrane transporter activity
LMD38_09385	COG0165	Argininosuccinate lyase
LMD38_09395	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_09415	COG0494	nUDIX hydrolase
LMD38_09425	COG0716	FMN binding
LMD38_09465	COG2720	vancomycin resistance protein
LMD38_09470	COG0765	amino acid transport
LMD38_09475	COG1126	abc transporter atp-binding protein
LMD38_09480	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_09485	COG2514	catechol 2,3-dioxygenase activity
LMD38_09500	COG1285	pathogenesis
LMD38_09540	COG0277	FAD linked oxidase domain protein
LMD38_09545	COG0385	Bile acid
LMD38_09555	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LMD38_09560	COG2808	Putative FMN-binding domain
LMD38_09575	COG0457	Tetratricopeptide repeat
LMD38_09585	COG0604	alcohol dehydrogenase
LMD38_09590	COG0640	Transcriptional regulator
LMD38_09595	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMD38_09600	COG0584	glycerophosphoryl diester phosphodiesterase
LMD38_09630	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LMD38_09650	COG1164	Oligoendopeptidase f
LMD38_09655	COG2162	N-hydroxyarylamine O-acetyltransferase activity
LMD38_09660	COG1193	negative regulation of DNA recombination
LMD38_09685	COG0583	DNA-binding transcription factor activity
LMD38_09710	COG1476	TRANSCRIPTIONal
LMD38_09715	COG1476	TRANSCRIPTIONal
LMD38_09765	COG3739	integral membrane protein
LMD38_09770	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_09775	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_09780	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_09795	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
LMD38_09800	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LMD38_09825	COG2814	Major facilitator Superfamily
LMD38_09830	COG1113	amino acid transport
LMD38_09835	COG0604	alcohol dehydrogenase
LMD38_09870	COG2072	flavoprotein involved in K transport
LMD38_09900	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_09935	COG3152	Membrane
LMD38_09955	COG1191	sigma factor activity
LMD38_09970	COG1733	regulation of RNA biosynthetic process
LMD38_09975	COG2249	NAD(P)H dehydrogenase (quinone) activity
LMD38_09980	COG0318	PFAM AMP-dependent synthetase and ligase
LMD38_10000	COG0384	phenazine biosynthesis protein PhzF
LMD38_10015	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_10030	COG0673	inositol 2-dehydrogenase activity
LMD38_10035	COG2188	Transcriptional regulator
LMD38_10065	COG0814	amino acid
LMD38_10080	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
LMD38_10090	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LMD38_10095	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
LMD38_10105	COG1070	Carbohydrate kinase
LMD38_10110	COG2706	6-phosphogluconolactonase activity
LMD38_10115	COG3813	Protein conserved in bacteria
LMD38_10120	COG1335	isochorismatase
LMD38_10130	COG1357	PFAM Pentapeptide repeats (8 copies)
LMD38_10140	COG0697	spore germination
LMD38_10170	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
LMD38_10180	COG0789	Transcriptional regulator
LMD38_10185	COG1253	flavin adenine dinucleotide binding
LMD38_10210	COG0477	Major facilitator Superfamily
LMD38_10225	COG2226	methyltransferase
LMD38_10255	COG0628	permease
LMD38_10270	COG0110	maltose O-acetyltransferase activity
LMD38_10280	COG1940	carbohydrate kinase activity
LMD38_10285	COG0346	lactoylglutathione lyase activity
LMD38_10310	COG2365	Tyrosine phosphatase family
LMD38_10320	COG1011	Hydrolase
LMD38_10345	COG1131	(ABC) transporter
LMD38_10355	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_10390	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
LMD38_10400	COG3344	reverse transcriptase
LMD38_10415	COG3409	Peptidoglycan-binding domain 1 protein
LMD38_10415	COG5632	N-Acetylmuramoyl-L-alanine amidase
LMD38_10425	COG1288	antiporter activity
LMD38_10445	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LMD38_10475	COG2249	NAD(P)H dehydrogenase (quinone) activity
LMD38_10485	COG2031	fatty acid transporter
LMD38_10500	COG2814	Major facilitator Superfamily
LMD38_10505	COG1846	Transcriptional regulator
LMD38_10520	COG0477	Major facilitator Superfamily
LMD38_10570	COG5444	nuclease activity
LMD38_10795	COG5632	N-Acetylmuramoyl-L-alanine amidase
LMD38_10795	COG3409	Peptidoglycan-binding domain 1 protein
LMD38_10815	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LMD38_10850	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
LMD38_10895	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_10900	COG2808	Putative FMN-binding domain
LMD38_10905	COG0456	acetyltransferase
LMD38_10910	COG1846	Transcriptional regulator
LMD38_10915	COG2364	Membrane
LMD38_10925	COG3850	Histidine kinase
LMD38_10925	COG5002	protein histidine kinase activity
LMD38_10940	COG0577	efflux transmembrane transporter activity
LMD38_10945	COG1136	(ABC) transporter
LMD38_10960	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
LMD38_10975	COG2515	1-aminocyclopropane-1-carboxylate deaminase
LMD38_11045	COG4895	conserved protein (DUF2196)
LMD38_11055	COG2814	Major facilitator Superfamily
LMD38_11090	COG3344	reverse transcriptase
LMD38_11125	COG0346	lactoylglutathione lyase activity
LMD38_11150	COG1309	transcriptional regulator
LMD38_11155	COG2814	Major facilitator Superfamily
LMD38_11165	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
LMD38_11165	COG3320	Male sterility
LMD38_11210	COG1136	(ABC) transporter
LMD38_11230	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LMD38_11240	COG0640	Transcriptional regulator
LMD38_11245	COG0346	lactoylglutathione lyase activity
LMD38_11250	COG0798	PFAM Bile acid sodium symporter
LMD38_11265	COG4154	Belongs to the RbsD FucU family
LMD38_11270	COG1129	ABC transporter
LMD38_11275	COG1172	Belongs to the binding-protein-dependent transport system permease family
LMD38_11285	COG0235	Class ii aldolase
LMD38_11290	COG1070	Carbohydrate kinase
LMD38_11300	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_11300	COG3347	Dehydrogenase
LMD38_11325	COG4641	Protein conserved in bacteria
LMD38_11330	COG2267	carboxylic ester hydrolase activity
LMD38_11340	COG1575	Belongs to the MenA family. Type 1 subfamily
LMD38_11355	COG5609	conserved protein (DUF2294)
LMD38_11360	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
LMD38_11370	COG0288	reversible hydration of carbon dioxide
LMD38_11375	COG0657	acetylesterase activity
LMD38_11385	COG2814	Major facilitator Superfamily
LMD38_11395	COG0415	Belongs to the DNA photolyase family
LMD38_11415	COG4990	cell redox homeostasis
LMD38_11420	COG0745	RESPONSE REGULATOR receiver
LMD38_11425	COG5002	protein histidine kinase activity
LMD38_11435	COG1063	alcohol dehydrogenase
LMD38_11450	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_11455	COG1819	glycosyl
LMD38_11460	COG0574	Belongs to the PEP-utilizing enzyme family
LMD38_11460	COG3848	Pyruvate phosphate dikinase
LMD38_11475	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
LMD38_11500	COG3314	Sporulation integral membrane protein YlbJ
LMD38_11515	COG1960	acyl-CoA dehydrogenase activity
LMD38_11520	COG0860	N-Acetylmuramoyl-L-alanine amidase
LMD38_11525	COG3142	Participates in the control of copper homeostasis
LMD38_11535	COG1414	Transcriptional regulator
LMD38_11540	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
LMD38_11545	COG1984	allophanate hydrolase subunit 2
LMD38_11580	COG0768	penicillin binding
LMD38_11610	COG0384	phenazine biosynthesis protein PhzF
LMD38_11620	COG0789	Transcriptional regulator
LMD38_11620	COG4978	Transcriptional regulator
LMD38_11630	COG0833	amino acid
LMD38_11640	COG0730	response to heat
LMD38_11685	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_11705	COG0456	acetyltransferase
LMD38_11710	COG2207	Transcriptional regulator
LMD38_11730	COG1136	(ABC) transporter
LMD38_11755	COG1136	(ABC) transporter
LMD38_11785	COG1846	Transcriptional regulator
LMD38_11790	COG0778	Nitroreductase
LMD38_11950	COG0714	Associated with various cellular activities
LMD38_11985	COG0583	DNA-binding transcription factor activity
LMD38_11990	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
LMD38_12010	COG0753	catalase activity
LMD38_12015	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
LMD38_12035	COG0714	Associated with various cellular activities
LMD38_12060	COG0346	lactoylglutathione lyase activity
LMD38_12075	COG3279	Response regulator of the LytR AlgR family
LMD38_12085	COG4377	Putative membrane peptidase family (DUF2324)
LMD38_12095	COG3655	Transcriptional regulator
LMD38_12105	COG1785	Belongs to the alkaline phosphatase family
LMD38_12115	COG3239	Fatty acid desaturase
LMD38_12135	COG0833	amino acid
LMD38_12140	COG1414	Transcriptional regulator
LMD38_12145	COG4187	Peptidase family M20/M25/M40
LMD38_12150	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
LMD38_12165	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_12180	COG2329	Antibiotic biosynthesis monooxygenase
LMD38_12200	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_12215	COG1070	Carbohydrate kinase
LMD38_12220	COG2390	Transcriptional regulator
LMD38_12230	COG1172	Belongs to the binding-protein-dependent transport system permease family
LMD38_12235	COG1172	Belongs to the binding-protein-dependent transport system permease family
LMD38_12240	COG1879	ABC-type sugar transport system periplasmic component
LMD38_12255	COG1309	transcriptional regulator
LMD38_12265	COG0277	FAD linked oxidase domain protein
LMD38_12280	COG1388	LysM domain
LMD38_12280	COG3584	3D domain protein
LMD38_12320	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
LMD38_12320	COG1605	Chorismate mutase
LMD38_12335	COG0287	Prephenate dehydrogenase
LMD38_12350	COG1309	transcriptional regulator
LMD38_12355	COG1033	growth of symbiont in host cell
LMD38_12355	COG2409	Drug exporters of the RND superfamily
LMD38_12370	COG0488	(ABC) transporter
LMD38_12375	COG1368	sulfuric ester hydrolase activity
LMD38_12380	COG0861	Integral membrane protein TerC family
LMD38_12385	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_12410	COG4912	Dna alkylation repair
LMD38_12430	COG2318	DinB family
LMD38_12435	COG0697	spore germination
LMD38_12455	COG2746	aminoglycoside 3-N-acetyltransferase activity
LMD38_12500	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LMD38_12505	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMD38_12510	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LMD38_12525	COG0628	permease
LMD38_12580	COG1131	(ABC) transporter
LMD38_12605	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
LMD38_12610	COG0436	Aminotransferase
LMD38_12645	COG2226	methyltransferase
LMD38_12660	COG2261	transglycosylase associated protein
LMD38_12680	COG0477	Major facilitator Superfamily
LMD38_12680	COG2814	Major facilitator Superfamily
LMD38_12685	COG4533	DNA binding
LMD38_12690	COG0789	Transcriptional regulator
LMD38_12695	COG1664	Polymer-forming cytoskeletal
LMD38_12705	COG2814	Major facilitator Superfamily
LMD38_12730	COG1307	EDD domain protein, DegV family
LMD38_12740	COG1164	Oligoendopeptidase f
LMD38_12755	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LMD38_12775	COG0745	RESPONSE REGULATOR receiver
LMD38_12780	COG5002	protein histidine kinase activity
LMD38_12785	COG2936	dipeptidyl-peptidase activity
LMD38_12835	COG4948	Mandelate Racemase Muconate Lactonizing
LMD38_12845	COG4166	transmembrane transport
LMD38_12850	COG0519	Catalyzes the synthesis of GMP from XMP
LMD38_12855	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LMD38_12870	COG0586	Pfam SNARE associated Golgi protein
LMD38_12910	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMD38_12915	COG3938	Belongs to the proline racemase family
LMD38_12925	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LMD38_12930	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_12935	COG1115	amino acid carrier protein
LMD38_12940	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
LMD38_12955	COG3397	chitin binding
LMD38_12975	COG4637	Psort location Cytoplasmic, score
LMD38_13005	COG0514	ATP-dependent DNA helicase (RecQ)
LMD38_13025	COG3973	AAA domain
LMD38_13065	COG2315	Protein conserved in bacteria
LMD38_13070	COG2226	methyltransferase
LMD38_13075	COG2205	protein histidine kinase activity
LMD38_13095	COG1819	glycosyl
LMD38_13100	COG2153	protein acetylation
LMD38_13130	COG4175	Glycine betaine
LMD38_13130	COG0517	IMP dehydrogenase activity
LMD38_13135	COG4176	ABC-type proline glycine betaine transport system permease component
LMD38_13160	COG2816	NAD+ diphosphatase activity
LMD38_13170	COG0572	uridine kinase
LMD38_13180	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_13190	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
LMD38_13195	COG0022	dehydrogenase e1 component
LMD38_13200	COG0508	dehydrogenase complex catalyzes the overall conversion of
LMD38_13205	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
LMD38_13220	COG1349	DNA-binding transcription factor activity
LMD38_13225	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_13235	COG3284	Transcriptional regulator
LMD38_13305	COG2959	enzyme of heme biosynthesis
LMD38_13320	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_13360	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_13365	COG0697	spore germination
LMD38_13375	COG0201	protein transport
LMD38_13390	COG3227	Zinc metalloprotease (Elastase)
LMD38_13395	COG1523	belongs to the glycosyl hydrolase 13 family
LMD38_13410	COG1011	Hydrolase
LMD38_13435	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMD38_13475	COG0322	excinuclease ABC activity
LMD38_13490	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
LMD38_13515	COG4667	esterase of the alpha-beta hydrolase superfamily
LMD38_13540	COG3878	Protein conserved in bacteria
LMD38_13560	COG1051	belongs to the nudix hydrolase family
LMD38_13565	COG0592	DNA-directed DNA polymerase activity
LMD38_13575	COG2223	nitrite transmembrane transporter activity
LMD38_13585	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LMD38_13620	COG0697	spore germination
LMD38_13625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_13645	COG0584	glycerophosphoryl diester phosphodiesterase
LMD38_13660	COG2814	Major facilitator Superfamily
LMD38_13700	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_13710	COG0768	penicillin binding
LMD38_13715	COG0671	phosphoesterase, PA-phosphatase related
LMD38_13720	COG0604	alcohol dehydrogenase
LMD38_13725	COG5002	protein histidine kinase activity
LMD38_13730	COG0745	RESPONSE REGULATOR receiver
LMD38_13740	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
LMD38_13750	COG2205	protein histidine kinase activity
LMD38_13775	COG1794	racemase activity, acting on amino acids and derivatives
LMD38_13780	COG1819	glycosyl
LMD38_13785	COG0768	penicillin binding
LMD38_13790	COG5002	protein histidine kinase activity
LMD38_13820	COG0561	phosphatase activity
LMD38_13855	COG2124	cytochrome p450
LMD38_14035	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LMD38_14045	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_14050	COG0460	homoserine dehydrogenase
LMD38_14070	COG0577	efflux transmembrane transporter activity
LMD38_14075	COG1136	(ABC) transporter
LMD38_14080	COG0488	(ABC) transporter
LMD38_14105	COG2205	protein histidine kinase activity
LMD38_14110	COG0745	RESPONSE REGULATOR receiver
LMD38_14120	COG3773	Cell wall hydrolase
LMD38_14125	COG1384	Belongs to the class-I aminoacyl-tRNA synthetase family
LMD38_14135	COG3386	PFAM SMP-30 Gluconolaconase
LMD38_14150	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
LMD38_14155	COG2323	membrane
LMD38_14180	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_14235	COG2814	Major facilitator Superfamily
LMD38_14240	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
LMD38_14260	COG3227	Zinc metalloprotease (Elastase)
LMD38_14280	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
LMD38_14305	COG1686	Belongs to the peptidase S11 family
LMD38_14310	COG2318	DinB family
LMD38_14320	COG0572	uridine kinase
LMD38_14335	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
LMD38_14340	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
LMD38_14345	COG1024	Enoyl-CoA hydratase
LMD38_14350	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
LMD38_14355	COG0511	ligase activity, forming carbon-carbon bonds
LMD38_14360	COG0439	Biotin carboxylase
LMD38_14365	COG1960	acyl-CoA dehydrogenase activity
LMD38_14380	COG1309	transcriptional regulator
LMD38_14390	COG1131	(ABC) transporter
LMD38_14400	COG1408	metallophosphoesterase
LMD38_14410	COG0768	penicillin binding
LMD38_14415	COG0768	penicillin binding
LMD38_14425	COG1595	DNA-templated transcription, initiation
LMD38_14430	COG0768	penicillin binding
LMD38_14440	COG2195	Cleaves the N-terminal amino acid of tripeptides
LMD38_14470	COG1846	Transcriptional regulator
LMD38_14475	COG3961	Belongs to the TPP enzyme family
LMD38_14480	COG2226	methyltransferase
LMD38_14490	COG3615	Tellurite resistance protein tehB
LMD38_14490	COG0500	methyltransferase
LMD38_14495	COG0577	efflux transmembrane transporter activity
LMD38_14495	COG1136	(ABC) transporter
LMD38_14510	COG1309	transcriptional regulator
LMD38_14545	COG1846	Transcriptional regulator
LMD38_14565	COG2971	BadF BadG BcrA BcrD
LMD38_14590	COG1649	PFAM Uncharacterised BCR, COG1649
LMD38_14650	COG1396	sequence-specific DNA binding
LMD38_14670	COG1132	(ABC) transporter
LMD38_14675	COG1132	(ABC) transporter
LMD38_14695	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
LMD38_14700	COG0583	DNA-binding transcription factor activity
LMD38_14710	COG0010	Belongs to the arginase family
LMD38_14725	COG1278	Cold shock
LMD38_14735	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_14740	COG2226	methyltransferase
LMD38_14750	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LMD38_14755	COG0596	Alpha beta hydrolase
LMD38_14775	COG1247	-acetyltransferase
LMD38_14815	COG1846	Transcriptional regulator
LMD38_14865	COG0028	Belongs to the TPP enzyme family
LMD38_14875	COG2814	Major facilitator Superfamily
LMD38_14880	COG0596	Alpha beta hydrolase
LMD38_14890	COG1136	(ABC) transporter
LMD38_14895	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
LMD38_14900	COG1187	pseudouridine synthase activity
LMD38_14905	COG2329	Antibiotic biosynthesis monooxygenase
LMD38_14915	COG1115	amino acid carrier protein
LMD38_14925	COG2318	DinB family
LMD38_14935	COG0776	regulation of translation
LMD38_14950	COG2814	Major facilitator Superfamily
LMD38_14955	COG3251	PFAM MbtH domain protein
LMD38_14960	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
LMD38_14965	COG1535	isochorismatase
LMD38_14965	COG3433	isochorismatase activity
LMD38_14970	COG1021	2,3-dihydroxybenzoate-AMP ligase
LMD38_14975	COG1169	isochorismate synthase
LMD38_14980	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_14985	COG2223	nitrite transmembrane transporter activity
LMD38_15010	COG0420	3'-5' exonuclease activity
LMD38_15025	COG1024	Enoyl-CoA hydratase
LMD38_15030	COG1280	lysine exporter protein (LysE YggA)
LMD38_15040	COG2084	Dehydrogenase
LMD38_15045	COG1960	acyl-CoA dehydrogenase activity
LMD38_15050	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
LMD38_15055	COG2079	MmgE PrpD family protein
LMD38_15060	COG0372	Belongs to the citrate synthase family
LMD38_15065	COG4841	protein insertion into membrane
LMD38_15070	COG2814	Major facilitator Superfamily
LMD38_15080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMD38_15080	COG4499	WXG100 protein secretion system (Wss), protein YukC
LMD38_15125	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMD38_15155	COG1595	DNA-templated transcription, initiation
LMD38_15190	COG5484	DNA packaging
LMD38_15190	COG3728	DNA packaging
LMD38_15200	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_15205	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
LMD38_15210	COG0671	phosphoesterase, PA-phosphatase related
LMD38_15220	COG0515	serine threonine protein kinase
LMD38_15220	COG3064	Membrane
LMD38_15220	COG4991	sh3 domain protein
LMD38_15255	COG1509	lysine 2,3-aminomutase activity
LMD38_15260	COG3829	transcription factor binding
LMD38_15265	COG0456	acetyltransferase
LMD38_15270	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LMD38_15275	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
LMD38_15280	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
LMD38_15285	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LMD38_15300	COG5506	Protein of unknown function (DUF1694)
LMD38_15305	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_15310	COG1253	flavin adenine dinucleotide binding
LMD38_15345	COG1174	glycine betaine transport
LMD38_15350	COG1125	glycine betaine transport
LMD38_15350	COG0517	IMP dehydrogenase activity
LMD38_15385	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
LMD38_15395	COG1070	Carbohydrate kinase
LMD38_15400	COG1522	sequence-specific DNA binding
LMD38_15425	COG1064	alcohol dehydrogenase
LMD38_15430	COG1737	Transcriptional regulator
LMD38_15435	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LMD38_15440	COG2197	response regulator
LMD38_15445	COG4585	Histidine kinase
LMD38_15445	COG2203	Gaf domain
LMD38_15450	COG0668	transmembrane transport
LMD38_15455	COG0071	Belongs to the small heat shock protein (HSP20) family
LMD38_15460	COG1051	belongs to the nudix hydrolase family
LMD38_15465	COG1335	isochorismatase
LMD38_15480	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMD38_15485	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_15500	COG0367	asparagine synthase
LMD38_15505	COG0071	Belongs to the small heat shock protein (HSP20) family
LMD38_15510	COG1999	signal sequence binding
LMD38_15515	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
LMD38_15520	COG1307	EDD domain protein, DegV family
LMD38_15530	COG0805	protein transport
LMD38_15540	COG1272	protein, Hemolysin III
LMD38_15545	COG0204	Acyl-transferase
LMD38_15555	COG0768	penicillin binding
LMD38_15570	COG3250	beta-galactosidase activity
LMD38_15575	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LMD38_15585	COG0546	phosphoglycolate phosphatase activity
LMD38_15595	COG4473	ABC transporter
LMD38_15600	COG1131	(ABC) transporter
LMD38_15610	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LMD38_15615	COG0456	acetyltransferase
LMD38_15625	COG1794	racemase activity, acting on amino acids and derivatives
LMD38_15630	COG1454	alcohol dehydrogenase
LMD38_15635	COG2610	gluconate transmembrane transporter activity
LMD38_15660	COG0733	neurotransmitter:sodium symporter activity
LMD38_15665	COG0017	Asparaginyl-tRNA synthetase
LMD38_15720	COG0018	arginyl-trna synthetase
LMD38_15725	COG2136	Putative SAM-dependent methyltransferase
LMD38_15725	COG2521	methyltransferase
LMD38_15740	COG1413	lyase activity
LMD38_15755	COG0629	single-stranded DNA binding
LMD38_15770	COG0488	(ABC) transporter
LMD38_15775	COG1418	mRNA catabolic process
LMD38_15785	COG2359	stage V sporulation protein S
LMD38_15830	COG0714	Associated with various cellular activities
LMD38_15835	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
LMD38_15840	COG1305	Transglutaminase-like
LMD38_15845	COG0386	Belongs to the glutathione peroxidase family
LMD38_15855	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
LMD38_15855	COG0426	domain, Protein
LMD38_15870	COG1595	DNA-templated transcription, initiation
LMD38_15875	COG0604	alcohol dehydrogenase
LMD38_15885	COG0346	lactoylglutathione lyase activity
LMD38_15890	COG1082	Xylose isomerase domain protein TIM barrel
LMD38_15910	COG2226	methyltransferase
LMD38_15935	COG3874	Sporulation protein YtfJ
LMD38_16030	COG4499	WXG100 protein secretion system (Wss), protein YukC
LMD38_16065	COG0456	acetyltransferase
LMD38_16095	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_16100	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_16105	COG1819	glycosyl
LMD38_16120	COG4106	trans-aconitate 2-methyltransferase activity
LMD38_16125	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LMD38_16135	COG0561	phosphatase activity
LMD38_16195	COG0640	Transcriptional regulator
LMD38_16205	COG0798	PFAM Bile acid sodium symporter
LMD38_16250	COG2211	Major facilitator Superfamily
LMD38_16255	COG0154	amidase activity
LMD38_16265	COG1876	peptidase activity
LMD38_16275	COG0860	N-Acetylmuramoyl-L-alanine amidase
LMD38_16295	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMD38_16300	COG1114	Component of the transport system for branched-chain amino acids
LMD38_16315	COG1253	flavin adenine dinucleotide binding
LMD38_16320	COG2839	Protein conserved in bacteria
LMD38_16325	COG0702	epimerase
LMD38_16340	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_16350	COG1607	acyl-coa hydrolase
LMD38_16355	COG3689	TIGRFAM TIGR03943 family protein
LMD38_16360	COG0701	Predicted permease
LMD38_16370	COG2244	polysaccharide biosynthetic process
LMD38_16375	COG0586	Pfam SNARE associated Golgi protein
LMD38_16380	COG1051	belongs to the nudix hydrolase family
LMD38_16385	COG5337	Spore coat protein CotH
LMD38_16395	COG0406	alpha-ribazole phosphatase activity
LMD38_16410	COG4166	transmembrane transport
LMD38_16420	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
LMD38_16430	COG0702	epimerase
LMD38_16440	COG0803	Belongs to the bacterial solute-binding protein 9 family
LMD38_16440	COG3443	Belongs to the bacterial solute-binding protein 9 family
LMD38_16445	COG0456	acetyltransferase
LMD38_16450	COG0523	cobalamin synthesis protein
LMD38_16455	COG4989	oxidoreductase activity
LMD38_16460	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_16465	COG1231	oxidoreductase activity
LMD38_16475	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
LMD38_16485	COG0783	Belongs to the Dps family
LMD38_16490	COG3949	Membrane
LMD38_16530	COG2814	Major facilitator Superfamily
LMD38_16535	COG0667	Aldo Keto reductase
LMD38_16540	COG0640	Transcriptional regulator
LMD38_16545	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
LMD38_16550	COG0366	Alpha amylase catalytic
LMD38_16555	COG3684	Belongs to the aldolase LacD family
LMD38_16560	COG1105	Belongs to the carbohydrate kinase PfkB family
LMD38_16570	COG2222	sugar isomerase
LMD38_16575	COG1940	carbohydrate kinase activity
LMD38_16585	COG5426	von Willebrand factor, type A
LMD38_16590	COG0395	ABC-type sugar transport system, permease component
LMD38_16595	COG1175	transmembrane transport
LMD38_16600	COG1653	transport
LMD38_16610	COG2508	Transcriptional regulator
LMD38_16615	COG3842	ATPase activity
LMD38_16620	COG1404	Belongs to the peptidase S8 family
LMD38_16625	COG2002	toxin-antitoxin pair type II binding
LMD38_16630	COG0577	efflux transmembrane transporter activity
LMD38_16665	COG1752	Esterase of the alpha-beta hydrolase superfamily
LMD38_16675	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_16680	COG1279	arginine transmembrane transporter activity
LMD38_16685	COG2814	Major facilitator Superfamily
LMD38_16695	COG1247	-acetyltransferase
LMD38_16700	COG1285	pathogenesis
LMD38_16720	COG1316	TRANSCRIPTIONal
LMD38_16745	COG0460	homoserine dehydrogenase
LMD38_16765	COG1443	Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP)
LMD38_16785	COG4122	O-methyltransferase activity
LMD38_16790	COG0300	oxidoreductase activity
LMD38_16800	COG5002	protein histidine kinase activity
LMD38_16805	COG0745	RESPONSE REGULATOR receiver
LMD38_16810	COG1132	(ABC) transporter
LMD38_16820	COG0791	NLP P60 protein
LMD38_16820	COG1388	LysM domain
LMD38_16835	COG1686	Belongs to the peptidase S11 family
LMD38_16875	COG1216	Glycosyl transferase, family 2
LMD38_16885	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
LMD38_16890	COG4988	ABC transporter
LMD38_16895	COG1294	oxidase, subunit
LMD38_16900	COG1271	oxidase subunit
LMD38_16920	COG1942	4-Oxalocrotonate Tautomerase
LMD38_16950	COG0411	ABC transporter
LMD38_16975	COG0745	RESPONSE REGULATOR receiver
LMD38_16980	COG3850	Histidine kinase
LMD38_16980	COG5002	protein histidine kinase activity
LMD38_16990	COG1876	peptidase activity
LMD38_17020	COG0210	DNA helicase
LMD38_17025	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
LMD38_17035	COG0523	cobalamin synthesis protein
LMD38_17040	COG1231	oxidoreductase activity
LMD38_17050	COG0628	permease
LMD38_17060	COG0778	Nitroreductase
LMD38_17065	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LMD38_17070	COG1959	2 iron, 2 sulfur cluster binding
LMD38_17075	COG0583	DNA-binding transcription factor activity
LMD38_17080	COG0697	spore germination
LMD38_17085	COG4549	nuclear export factor GLE1
LMD38_17090	COG2372	response to copper ion
LMD38_17090	COG1276	copper resistance
LMD38_17100	COG1114	Component of the transport system for branched-chain amino acids
LMD38_17125	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
LMD38_17135	COG2132	Multicopper oxidase
LMD38_17140	COG0006	proline dipeptidase activity
LMD38_17150	COG4846	Membrane protein involved in cytochrome C biogenesis
LMD38_17165	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
LMD38_17170	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_17180	COG2390	Transcriptional regulator
LMD38_17210	COG0531	amino acid
LMD38_17220	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
LMD38_17235	COG1914	H( )-stimulated, divalent metal cation uptake system
LMD38_17260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
LMD38_17265	COG4166	transmembrane transport
LMD38_17290	COG0427	acetyl-CoA hydrolase
LMD38_17295	COG3279	Response regulator of the LytR AlgR family
LMD38_17310	COG3384	dioxygenase
LMD38_17320	COG2814	Major facilitator Superfamily
LMD38_17345	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
LMD38_17365	COG0028	Belongs to the TPP enzyme family
LMD38_17370	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMD38_17380	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMD38_17395	COG2323	membrane
LMD38_17400	COG5566	PFAM Mor transcription activator
LMD38_17410	COG0733	neurotransmitter:sodium symporter activity
LMD38_17415	COG2244	polysaccharide biosynthetic process
LMD38_17430	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LMD38_17435	COG2223	nitrite transmembrane transporter activity
LMD38_17440	COG4166	transmembrane transport
LMD38_17445	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
LMD38_17455	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMD38_17460	COG0477	Major facilitator Superfamily
LMD38_17475	COG1695	Transcriptional regulator
LMD38_17490	COG1105	Belongs to the carbohydrate kinase PfkB family
LMD38_17505	COG2222	sugar isomerase
LMD38_17510	COG2188	Transcriptional regulator
LMD38_17520	COG0395	ABC-type sugar transport system, permease component
LMD38_17525	COG1175	transmembrane transport
LMD38_17535	COG2508	Transcriptional regulator
LMD38_17540	COG3842	ATPase activity
LMD38_17555	COG2814	Major facilitator Superfamily
LMD38_17560	COG1051	belongs to the nudix hydrolase family
LMD38_17590	COG3620	sequence-specific DNA binding
LMD38_17605	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
LMD38_17610	COG1361	Conserved repeat domain
LMD38_17620	COG0784	Response regulator, receiver
LMD38_17625	COG4191	Histidine kinase
LMD38_17630	COG0281	malic enzyme
LMD38_17635	COG1027	Aspartate ammonia-lyase
LMD38_17645	COG0528	UMP kinase activity
LMD38_17650	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_17670	COG1131	(ABC) transporter
LMD38_17705	COG2733	membrane
LMD38_17755	COG3340	Belongs to the peptidase S51 family
LMD38_17760	COG0534	Mate efflux family protein
LMD38_17775	COG0114	fumarate hydratase activity
LMD38_17780	COG1757	Na H antiporter
LMD38_17785	COG0438	transferase activity, transferring glycosyl groups
LMD38_17785	COG1216	Glycosyl transferase, family 2
LMD38_17800	COG0523	cobalamin synthesis protein
LMD38_17805	COG0697	spore germination
LMD38_17810	COG1802	Transcriptional regulator
LMD38_17840	COG0367	asparagine synthase
LMD38_17850	COG1846	Transcriptional regulator
LMD38_17870	COG0406	alpha-ribazole phosphatase activity
LMD38_17895	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_17910	COG1234	tRNA 3'-trailer cleavage
LMD38_17930	COG0583	DNA-binding transcription factor activity
LMD38_17955	COG3764	Sortase (surface protein transpeptidase)
LMD38_17960	COG3764	Sortase (surface protein transpeptidase)
LMD38_17975	COG2329	Antibiotic biosynthesis monooxygenase
LMD38_17995	COG1309	transcriptional regulator
LMD38_18020	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
LMD38_18025	COG4786	Flagellar basal body rod
LMD38_18030	COG1419	protein localization to endoplasmic reticulum
LMD38_18035	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMD38_18040	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
LMD38_18050	COG1987	bacterial-type flagellum assembly
LMD38_18055	COG1338	Plays a role in the flagellum-specific transport system
LMD38_18065	COG1776	CheC inhibitor of MCP methylation
LMD38_18065	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LMD38_18070	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LMD38_18080	COG0741	lytic transglycosylase activity
LMD38_18085	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
LMD38_18100	COG0835	chemotaxis
LMD38_18100	COG0784	Response regulator, receiver
LMD38_18115	COG1749	Flagellar hook protein flgE
LMD38_18135	COG1157	protein secretion by the type III secretion system
LMD38_18145	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LMD38_18150	COG1766	The M ring may be actively involved in energy transduction
LMD38_18160	COG1558	bacterial-type flagellum-dependent cell motility
LMD38_18165	COG1815	bacterial-type flagellum-dependent cell motility
LMD38_18190	COG1256	bacterial-type flagellum assembly
LMD38_18210	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LMD38_18225	COG1776	CheC inhibitor of MCP methylation
LMD38_18225	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
LMD38_18230	COG0643	Histidine kinase
LMD38_18230	COG2198	Histidine kinase
LMD38_18235	COG2201	protein-glutamate methylesterase activity
LMD38_18240	COG1360	Flagellar Motor Protein
LMD38_18245	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
LMD38_18255	COG1923	regulation of RNA biosynthetic process
LMD38_18275	COG2814	Major facilitator Superfamily
LMD38_18315	COG1434	Gram-negative-bacterium-type cell wall biogenesis
LMD38_18320	COG2323	membrane
LMD38_18330	COG0789	Transcriptional regulator
LMD38_18330	COG4978	Transcriptional regulator
LMD38_18335	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
LMD38_18340	COG0475	glutathione-regulated potassium exporter activity
LMD38_18350	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
LMD38_18355	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMD38_18360	COG3162	membrane
LMD38_18375	COG1280	lysine exporter protein (LysE YggA)
LMD38_18380	COG3403	YqcI/YcgG family
LMD38_18415	COG0328	RNA-DNA hybrid ribonuclease activity
LMD38_18435	COG0454	-acetyltransferase
LMD38_18450	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
LMD38_18490	COG0456	acetyltransferase
LMD38_18500	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LMD38_18505	COG2311	Membrane
LMD38_18510	COG2233	PERMEase
LMD38_18520	COG0024	Methionine aminopeptidase
LMD38_18530	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
LMD38_18535	COG1199	ATP-dependent helicase activity
LMD38_18545	COG0116	Belongs to the methyltransferase superfamily
LMD38_18605	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMD38_18605	COG4499	WXG100 protein secretion system (Wss), protein YukC
LMD38_18615	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
LMD38_18620	COG3935	DnaD domain protein
LMD38_18640	COG1199	ATP-dependent helicase activity
LMD38_18640	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
LMD38_18675	COG0438	transferase activity, transferring glycosyl groups
LMD38_18680	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
LMD38_18695	COG1694	Mazg nucleotide pyrophosphohydrolase
LMD38_18700	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_18710	COG2738	Putative neutral zinc metallopeptidase
LMD38_18725	COG4347	Protein of unknown function (DUF1405)
LMD38_18730	COG2010	Cytochrome c
LMD38_18730	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LMD38_18735	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
LMD38_18755	COG0457	Tetratricopeptide repeat
LMD38_18780	COG0142	geranyltranstransferase activity
LMD38_18790	COG0142	geranyltranstransferase activity
LMD38_18805	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
LMD38_18880	COG0492	ferredoxin-NADP+ reductase activity
LMD38_18900	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
LMD38_18905	COG4862	establishment of competence for transformation
LMD38_18915	COG1408	metallophosphoesterase
LMD38_18925	COG1266	CAAX protease self-immunity
LMD38_18930	COG0514	ATP-dependent DNA helicase (RecQ)
LMD38_18940	COG1141	Ferredoxin
LMD38_18945	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
LMD38_18955	COG4942	peptidase
LMD38_18960	COG2096	Adenosyltransferase
LMD38_18965	COG5002	protein histidine kinase activity
LMD38_18970	COG0745	RESPONSE REGULATOR receiver
LMD38_18975	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
LMD38_18980	COG1333	cytochrome c biogenesis protein
LMD38_18990	COG1187	pseudouridine synthase activity
LMD38_18995	COG0700	Nucleoside recognition
LMD38_19000	COG2715	membrane protein required for spore maturation
LMD38_19005	COG1686	Belongs to the peptidase S11 family
LMD38_19010	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LMD38_19025	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
LMD38_19025	COG0392	lysyltransferase activity
LMD38_19045	COG5002	protein histidine kinase activity
LMD38_19050	COG0582	viral genome integration into host DNA
LMD38_19060	COG1801	Protein of unknown function DUF72
LMD38_19065	COG3852	Histidine kinase
LMD38_19080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMD38_19085	COG1392	Phosphate transport regulator
LMD38_19090	COG0306	phosphate transporter
LMD38_19095	COG0730	response to heat
LMD38_19130	COG2226	methyltransferase
LMD38_19140	COG1114	Component of the transport system for branched-chain amino acids
LMD38_19150	COG2197	response regulator
LMD38_19155	COG4585	Histidine kinase
LMD38_19160	COG4758	membrane
LMD38_19175	COG1757	Na H antiporter
LMD38_19200	COG0733	neurotransmitter:sodium symporter activity
LMD38_19205	COG1648	precorrin-2 dehydrogenase activity
LMD38_19225	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
LMD38_19230	COG0529	Catalyzes the synthesis of activated sulfate
LMD38_19250	COG0019	diaminopimelate decarboxylase activity
LMD38_19260	COG1368	sulfuric ester hydrolase activity
LMD38_19265	COG1183	phosphatidylcholine synthase activity
LMD38_19280	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
LMD38_19355	COG0440	acetolactate synthase activity
LMD38_19360	COG0028	Belongs to the TPP enzyme family
LMD38_19365	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMD38_19385	COG3874	Sporulation protein YtfJ
LMD38_19390	COG4709	membrane
LMD38_19395	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LMD38_19400	COG1301	dicarboxylic acid transport
LMD38_19410	COG1846	Transcriptional regulator
LMD38_19450	COG3173	Aminoglycoside phosphotransferase
LMD38_19465	COG0716	FMN binding
LMD38_19490	COG1696	Membrane protein involved in D-alanine export
LMD38_19500	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
LMD38_19505	COG2070	2-Nitropropane dioxygenase
LMD38_19510	COG1619	proteins homologs of microcin C7 resistance protein MccF
LMD38_19525	COG1522	sequence-specific DNA binding
LMD38_19540	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LMD38_19545	COG1131	(ABC) transporter
LMD38_19555	COG1131	(ABC) transporter
LMD38_19560	COG1725	Transcriptional regulator
LMD38_19600	COG1780	Probably involved in ribonucleotide reductase function
LMD38_19630	COG4873	Protein conserved in bacteria
LMD38_19645	COG0720	synthase
LMD38_19655	COG5002	protein histidine kinase activity
LMD38_19665	COG2318	DinB family
LMD38_19675	COG1846	Transcriptional regulator
LMD38_19680	COG3852	Histidine kinase
LMD38_19690	COG2861	carbohydrate metabolic process
LMD38_19700	COG0235	Class ii aldolase
LMD38_19710	COG1349	DNA-binding transcription factor activity
LMD38_19735	COG3842	ATPase activity
LMD38_19740	COG1840	ABC-type Fe3 transport system, periplasmic component
LMD38_19755	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LMD38_19765	COG3243	poly(R)-hydroxyalkanoic acid synthase
LMD38_19770	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_19790	COG2030	dehydratase
LMD38_19800	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
LMD38_19805	COG0861	Integral membrane protein TerC family
LMD38_19810	COG2116	formate transmembrane transporter activity
LMD38_19820	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
LMD38_19840	COG2186	Transcriptional regulator
LMD38_19845	COG5002	protein histidine kinase activity
LMD38_19850	COG0745	RESPONSE REGULATOR receiver
LMD38_19860	COG3835	regulator
LMD38_19865	COG0277	FAD linked oxidase domain protein
LMD38_19870	COG0247	lactate metabolic process
LMD38_19875	COG2340	Cysteine-rich secretory protein family
LMD38_19885	COG0564	pseudouridine synthase activity
LMD38_19895	COG2409	Drug exporters of the RND superfamily
LMD38_19905	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
LMD38_19910	COG1177	transmembrane transport
LMD38_19915	COG1176	ABC-type spermidine putrescine transport system, permease component I
LMD38_19925	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_19970	COG0681	Belongs to the peptidase S26 family
LMD38_19975	COG1686	Belongs to the peptidase S11 family
LMD38_19995	COG4974	Belongs to the 'phage' integrase family
LMD38_20105	COG1476	TRANSCRIPTIONal
LMD38_20115	COG0508	dehydrogenase complex catalyzes the overall conversion of
LMD38_20135	COG2226	methyltransferase
LMD38_20170	COG5634	Uncharacterized conserved protein (DUF2278)
LMD38_20180	COG1620	l-lactate permease
LMD38_20215	COG0512	Glutamine amidotransferase of anthranilate synthase
LMD38_20215	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
LMD38_20225	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMD38_20230	COG5492	domain, Protein
LMD38_20245	COG2382	esterase
LMD38_20255	COG2153	protein acetylation
LMD38_20305	COG1091	dTDP-4-dehydrorhamnose reductase activity
LMD38_20320	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
LMD38_20340	COG0457	Tetratricopeptide repeat
LMD38_20340	COG0463	Glycosyl transferase, family 2
LMD38_20350	COG4122	O-methyltransferase activity
LMD38_20360	COG0463	Glycosyl transferase, family 2
LMD38_20360	COG1216	Glycosyl transferase, family 2
LMD38_20365	COG0772	Belongs to the SEDS family
LMD38_20380	COG0564	pseudouridine synthase activity
LMD38_20390	COG2357	RelA SpoT domain protein
LMD38_20400	COG4116	CYTH
LMD38_20405	COG2346	COG2346, Truncated hemoglobins
LMD38_20420	COG1164	Oligoendopeptidase f
LMD38_20430	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_20435	COG4862	establishment of competence for transformation
LMD38_20440	COG0861	Integral membrane protein TerC family
LMD38_20455	COG4166	transmembrane transport
LMD38_20460	COG0534	Mate efflux family protein
LMD38_20480	COG4608	Belongs to the ABC transporter superfamily
LMD38_20485	COG0444	Belongs to the ABC transporter superfamily
LMD38_20490	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMD38_20495	COG0601	transmembrane transport
LMD38_20500	COG4166	transmembrane transport
LMD38_20510	COG0180	Tryptophanyl-tRNA synthetase
LMD38_20520	COG5504	Zn-dependent protease
LMD38_20525	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
LMD38_20530	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMD38_20545	COG2267	carboxylic ester hydrolase activity
LMD38_20570	COG0561	phosphatase activity
LMD38_20585	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_20595	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMD38_20600	COG2996	Protein conserved in bacteria
LMD38_20620	COG0004	ammonium transporteR
LMD38_20625	COG3339	Conserved Protein
LMD38_20645	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
LMD38_20660	COG0753	catalase activity
LMD38_20670	COG0367	asparagine synthase
LMD38_20695	COG0179	Fumarylacetoacetate (FAA) hydrolase
LMD38_20755	COG0398	Pfam SNARE associated Golgi protein
LMD38_20765	COG4903	ComK protein
LMD38_20790	COG2224	Isocitrate lyase
LMD38_20795	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
LMD38_20810	COG0697	spore germination
LMD38_20815	COG0501	Belongs to the peptidase M48B family
LMD38_20840	COG0745	RESPONSE REGULATOR receiver
LMD38_20845	COG2205	protein histidine kinase activity
LMD38_20850	COG3708	Transcriptional regulator
LMD38_20850	COG2207	Transcriptional regulator
LMD38_20855	COG1595	DNA-templated transcription, initiation
LMD38_20865	COG1078	dGTPase activity
LMD38_20870	COG1408	metallophosphoesterase
LMD38_20875	COG1073	alpha beta
LMD38_20970	COG4208	sulfate ABC transporter
LMD38_20980	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
LMD38_20995	COG0318	PFAM AMP-dependent synthetase and ligase
LMD38_21005	COG0095	Lipoate-protein ligase
LMD38_21010	COG1234	tRNA 3'-trailer cleavage
LMD38_21020	COG1609	Transcriptional regulator
LMD38_21025	COG2378	regulation of single-species biofilm formation
LMD38_21035	COG3863	Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
LMD38_21060	COG1511	domain protein
LMD38_21060	COG1511	domain protein
LMD38_21065	COG1309	transcriptional regulator
LMD38_21105	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
LMD38_21120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMD38_21125	COG2329	Antibiotic biosynthesis monooxygenase
LMD38_21130	COG3428	Bacterial PH domain
LMD38_21135	COG3402	PFAM membrane-flanked domain
LMD38_21165	COG3428	Bacterial PH domain
LMD38_21170	COG3402	PFAM membrane-flanked domain
LMD38_21180	COG1309	transcriptional regulator
LMD38_21195	COG4473	ABC transporter
LMD38_21200	COG1131	(ABC) transporter
LMD38_21205	COG0537	adenosine 5'-monophosphoramidase activity
LMD38_21210	COG4980	gas vesicle protein
LMD38_21230	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
LMD38_21235	COG3973	AAA domain
LMD38_21250	COG0772	Belongs to the SEDS family
LMD38_21260	COG1595	DNA-templated transcription, initiation
LMD38_21275	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
LMD38_21285	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
LMD38_21290	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LMD38_21300	COG2267	carboxylic ester hydrolase activity
LMD38_21310	COG0457	Tetratricopeptide repeat
LMD38_21320	COG0346	lactoylglutathione lyase activity
LMD38_21325	COG0346	lactoylglutathione lyase activity
LMD38_21340	COG4717	serine-type aminopeptidase activity
LMD38_21345	COG0420	3'-5' exonuclease activity
LMD38_21415	COG0784	Response regulator, receiver
LMD38_21415	COG2205	protein histidine kinase activity
LMD38_21415	COG5002	protein histidine kinase activity
LMD38_21420	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
LMD38_21425	COG2208	phosphoserine phosphatase activity
LMD38_21460	COG4608	Belongs to the ABC transporter superfamily
LMD38_21465	COG0444	Belongs to the ABC transporter superfamily
LMD38_21470	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMD38_21475	COG0601	transmembrane transport
LMD38_21525	COG3708	Transcriptional regulator
LMD38_21525	COG2207	Transcriptional regulator
LMD38_21540	COG4974	Belongs to the 'phage' integrase family
LMD38_21560	COG1363	Peptidase, m42
LMD38_21580	COG1024	Enoyl-CoA hydratase
LMD38_21590	COG2373	Large extracellular alpha-helical protein
LMD38_21595	COG4193	domain, Protein
LMD38_21595	COG5263	repeat protein
LMD38_21610	COG2244	polysaccharide biosynthetic process
LMD38_21630	COG0659	secondary active sulfate transmembrane transporter activity
LMD38_21650	COG0635	Involved in the biosynthesis of porphyrin-containing compound
LMD38_21655	COG0561	phosphatase activity
LMD38_21665	COG3527	Alpha-acetolactate decarboxylase
LMD38_21670	COG0028	Belongs to the TPP enzyme family
LMD38_21700	COG0189	ligase activity
LMD38_21715	COG1126	abc transporter atp-binding protein
LMD38_21720	COG0765	amino acid transport
LMD38_21725	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_21730	COG1132	(ABC) transporter
LMD38_21735	COG1132	(ABC) transporter
LMD38_21740	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_21745	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
LMD38_21750	COG0531	amino acid
LMD38_21760	COG0693	protein deglycase activity
LMD38_21770	COG2211	Major facilitator Superfamily
LMD38_21775	COG4533	DNA binding
LMD38_21790	COG1733	regulation of RNA biosynthetic process
LMD38_21795	COG2814	Major facilitator Superfamily
LMD38_21800	COG1309	transcriptional regulator
LMD38_21805	COG2076	Multidrug Resistance protein
LMD38_21825	COG1522	sequence-specific DNA binding
LMD38_21845	COG2259	Doxx family
LMD38_21855	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_21855	COG1263	PTS System
LMD38_21865	COG1737	Transcriptional regulator
LMD38_21875	COG0475	glutathione-regulated potassium exporter activity
LMD38_21880	COG0531	amino acid
LMD38_21915	COG0586	Pfam SNARE associated Golgi protein
LMD38_21950	COG3546	catalase activity
LMD38_21955	COG1114	Component of the transport system for branched-chain amino acids
LMD38_21970	COG5522	Integral membrane protein (intg_mem_TP0381)
LMD38_21980	COG1136	(ABC) transporter
LMD38_21985	COG0577	efflux transmembrane transporter activity
LMD38_21990	COG3584	3D domain protein
LMD38_21990	COG1388	LysM domain
LMD38_22010	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
LMD38_22015	COG1447	Phosphotransferase system cellobiose-specific component IIA
LMD38_22020	COG3711	transcriptional antiterminator
LMD38_22020	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
LMD38_22030	COG2814	Major facilitator Superfamily
LMD38_22035	COG1283	sodium-dependent phosphate transmembrane transporter activity
LMD38_22040	COG0604	alcohol dehydrogenase
LMD38_22045	COG1316	TRANSCRIPTIONal
LMD38_22055	COG0730	response to heat
LMD38_22060	COG2210	Belongs to the sulfur carrier protein TusA family
LMD38_22065	COG0425	Belongs to the sulfur carrier protein TusA family
LMD38_22065	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_22070	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_22075	COG0425	Belongs to the sulfur carrier protein TusA family
LMD38_22080	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_22080	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
LMD38_22085	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
LMD38_22085	COG0425	Belongs to the sulfur carrier protein TusA family
LMD38_22090	COG1937	Protein conserved in bacteria
LMD38_22115	COG3591	Belongs to the peptidase S1B family
LMD38_22130	COG2719	SpoVR family
LMD38_22135	COG0778	Nitroreductase
LMD38_22175	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_22195	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_22200	COG2252	PERMEase
LMD38_22215	COG1846	Transcriptional regulator
LMD38_22220	COG2814	Major facilitator Superfamily
LMD38_22225	COG2205	protein histidine kinase activity
LMD38_22265	COG0351	phosphomethylpyrimidine kinase
LMD38_22270	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
LMD38_22280	COG2104	thiamine diphosphate biosynthetic process
LMD38_22285	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMD38_22290	COG0352	thiamine-phosphate diphosphorylase activity
LMD38_22295	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
LMD38_22300	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMD38_22305	COG1116	anion transmembrane transporter activity
LMD38_22310	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
LMD38_22330	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
LMD38_22450	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMD38_22465	COG0581	inorganic phosphate transmembrane transporter activity
LMD38_22470	COG0573	inorganic phosphate transmembrane transporter activity
LMD38_22475	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
LMD38_22480	COG1918	ferrous iron import across plasma membrane
LMD38_22480	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LMD38_22485	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LMD38_22490	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
LMD38_22505	COG0531	amino acid
LMD38_22510	COG0697	spore germination
LMD38_22515	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
LMD38_22530	COG4990	cell redox homeostasis
LMD38_22535	COG0833	amino acid
LMD38_22540	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
LMD38_22545	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
LMD38_22560	COG0475	glutathione-regulated potassium exporter activity
LMD38_22560	COG0569	domain protein
LMD38_22570	COG2153	protein acetylation
LMD38_22585	COG2252	PERMEase
LMD38_22590	COG1113	amino acid transport
LMD38_22605	COG1114	Component of the transport system for branched-chain amino acids
LMD38_22610	COG3104	oligopeptide transport
LMD38_22630	COG1476	TRANSCRIPTIONal
LMD38_22635	COG3584	3D domain protein
LMD38_22635	COG1388	LysM domain
LMD38_22640	COG0840	transmembrane signaling receptor activity
LMD38_22670	COG3568	Endonuclease Exonuclease Phosphatase
LMD38_22685	COG1063	alcohol dehydrogenase
LMD38_22710	COG1879	ABC-type sugar transport system periplasmic component
LMD38_22715	COG1172	Belongs to the binding-protein-dependent transport system permease family
LMD38_22740	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMD38_22745	COG1609	Transcriptional regulator
LMD38_22750	COG0477	Major facilitator Superfamily
LMD38_22755	COG1846	Transcriptional regulator
LMD38_22760	COG2271	Major facilitator Superfamily
LMD38_22770	COG4608	Belongs to the ABC transporter superfamily
LMD38_22775	COG0601	transmembrane transport
LMD38_22785	COG0747	negative chemotaxis
LMD38_22800	COG0659	secondary active sulfate transmembrane transporter activity
LMD38_22815	COG5002	protein histidine kinase activity
LMD38_22820	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
LMD38_22825	COG2378	regulation of single-species biofilm formation
LMD38_22850	COG0833	amino acid
LMD38_22855	COG0765	amino acid transport
LMD38_22860	COG0765	amino acid transport
LMD38_22865	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_22870	COG1126	abc transporter atp-binding protein
LMD38_22875	COG1115	amino acid carrier protein
LMD38_22880	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
LMD38_22890	COG0697	spore germination
LMD38_22905	COG0366	Alpha amylase catalytic
LMD38_22910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_22910	COG1263	PTS System
LMD38_22915	COG2188	Transcriptional regulator
LMD38_22920	COG0531	amino acid
LMD38_22940	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_22945	COG0714	Associated with various cellular activities
LMD38_22950	COG4548	von Willebrand factor, type A
LMD38_22965	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
LMD38_22970	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LMD38_22975	COG0156	8-amino-7-oxononanoate synthase activity
LMD38_22980	COG2226	methyltransferase
LMD38_22990	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_22995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_23000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_23005	COG3104	oligopeptide transport
LMD38_23020	COG1620	l-lactate permease
LMD38_23030	COG1027	Aspartate ammonia-lyase
LMD38_23035	COG1253	flavin adenine dinucleotide binding
LMD38_23040	COG0346	lactoylglutathione lyase activity
LMD38_23045	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_23050	COG1316	TRANSCRIPTIONal
LMD38_23055	COG2720	vancomycin resistance protein
LMD38_23075	COG3227	Zinc metalloprotease (Elastase)
LMD38_23090	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
LMD38_23095	COG2217	Heavy metal translocating P-type atpase
LMD38_23100	COG0640	Transcriptional regulator
LMD38_23105	COG0531	amino acid
LMD38_23120	COG2427	Protein of unknown function (DUF1641)
LMD38_23125	COG3383	formate dehydrogenase (NAD+) activity
LMD38_23135	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
LMD38_23140	COG0454	-acetyltransferase
LMD38_23140	COG0456	acetyltransferase
LMD38_23145	COG0745	RESPONSE REGULATOR receiver
LMD38_23150	COG5002	protein histidine kinase activity
LMD38_23160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_23165	COG0697	spore germination
LMD38_23175	COG4990	cell redox homeostasis
LMD38_23190	COG5002	protein histidine kinase activity
LMD38_23195	COG0745	RESPONSE REGULATOR receiver
LMD38_23200	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
LMD38_23210	COG0395	ABC-type sugar transport system, permease component
LMD38_23215	COG1175	transmembrane transport
LMD38_23220	COG3842	ATPase activity
LMD38_23225	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
LMD38_23250	COG2851	Citrate transporter
LMD38_23255	COG4565	transcriptional regulatory protein
LMD38_23260	COG3290	protein histidine kinase activity
LMD38_23270	COG2268	Band 7 protein
LMD38_23275	COG1585	Membrane protein implicated in regulation of membrane protease activity
LMD38_23285	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LMD38_23290	COG0765	amino acid transport
LMD38_23295	COG0765	amino acid transport
LMD38_23300	COG1126	abc transporter atp-binding protein
LMD38_23305	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_23325	COG2766	serine protein kinase
LMD38_23335	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
LMD38_23345	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
LMD38_23355	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
LMD38_23360	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
LMD38_23470	COG0735	belongs to the Fur family
LMD38_23475	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
LMD38_23495	COG4555	ABC transporter
LMD38_23505	COG0067	glutamate synthase
LMD38_23505	COG0069	glutamate synthase activity
LMD38_23505	COG0070	glutamate synthase
LMD38_23510	COG4129	membrane
LMD38_23515	COG1132	(ABC) transporter
LMD38_23540	COG1194	a g-specific adenine glycosylase
LMD38_23545	COG1988	membrane-bound metal-dependent
LMD38_23575	COG1090	epimerase
LMD38_23580	COG0402	S-adenosylhomocysteine deaminase activity
LMD38_23600	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
LMD38_23615	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
LMD38_23615	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
LMD38_23625	COG0463	Glycosyl transferase, family 2
LMD38_23640	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
LMD38_23645	COG1263	PTS System
LMD38_23645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_23675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
LMD38_23680	COG0833	amino acid
LMD38_23690	COG3829	transcription factor binding
LMD38_23710	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
LMD38_23730	COG0535	radical SAM domain protein
LMD38_23740	COG0387	Pfam Sodium calcium exchanger
LMD38_23745	COG3871	stress protein (general stress protein 26)
LMD38_23760	COG0586	Pfam SNARE associated Golgi protein
LMD38_23770	COG0681	Belongs to the peptidase S26 family
LMD38_23785	COG0697	spore germination
LMD38_23790	COG2217	Heavy metal translocating P-type atpase
LMD38_23795	COG1295	ribonuclease BN
LMD38_23805	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
LMD38_23820	COG3853	Toxic anion resistance protein (TelA)
LMD38_23830	COG0861	Integral membrane protein TerC family
LMD38_23835	COG2310	stress, protein
LMD38_23840	COG2310	stress, protein
LMD38_23845	COG2310	stress, protein
LMD38_23875	COG2270	Major facilitator Superfamily
LMD38_23930	COG0488	(ABC) transporter
LMD38_23940	COG1116	anion transmembrane transporter activity
LMD38_23950	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
LMD38_23965	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
LMD38_23995	COG2190	(PTS) system
LMD38_23995	COG1263	PTS System
LMD38_23995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_24000	COG0366	Alpha amylase catalytic
LMD38_24005	COG0277	FAD linked oxidase domain protein
LMD38_24010	COG0840	transmembrane signaling receptor activity
LMD38_24015	COG0840	transmembrane signaling receptor activity
LMD38_24025	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
LMD38_24030	COG0765	amino acid transport
LMD38_24045	COG1215	transferase activity, transferring glycosyl groups
LMD38_24055	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
LMD38_24055	COG0723	plastoquinol--plastocyanin reductase activity
LMD38_24060	COG2814	Major facilitator Superfamily
LMD38_24065	COG3541	Predicted nucleotidyltransferase
LMD38_24105	COG0166	Belongs to the GPI family
LMD38_24120	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_24125	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_24130	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_24170	COG0450	alkyl hydroperoxide reductase
LMD38_24190	COG1473	amidohydrolase
LMD38_24195	COG1757	Na H antiporter
LMD38_24230	COG4807	Protein conserved in bacteria
LMD38_24235	COG5002	protein histidine kinase activity
LMD38_24240	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMD38_24245	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
LMD38_24250	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
LMD38_24260	COG2309	aminopeptidase activity
LMD38_24265	COG2076	Multidrug Resistance protein
LMD38_24270	COG1012	belongs to the aldehyde dehydrogenase family
LMD38_24280	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
LMD38_24285	COG0546	phosphoglycolate phosphatase activity
LMD38_24290	COG1597	lipid kinase activity
LMD38_24310	COG4682	membrane
LMD38_24315	COG1846	Transcriptional regulator
LMD38_24320	COG0003	Pfam Anion-transporting ATPase
LMD38_24340	COG2011	ABC-type metal ion transport system permease component
LMD38_24350	COG1335	isochorismatase
LMD38_24370	COG4851	CamS sex pheromone cAM373 precursor
LMD38_24380	COG0210	DNA helicase
LMD38_24405	COG0151	Belongs to the GarS family
LMD38_24415	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
LMD38_24425	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
LMD38_24440	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
LMD38_24450	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
LMD38_24455	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
LMD38_24460	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
LMD38_24485	COG0697	spore germination
LMD38_24515	COG0583	DNA-binding transcription factor activity
LMD38_24540	COG1215	transferase activity, transferring glycosyl groups
LMD38_24560	COG2226	methyltransferase
LMD38_24590	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
LMD38_24615	COG5002	protein histidine kinase activity
LMD38_24625	COG2252	PERMEase
LMD38_24645	COG1266	CAAX protease self-immunity
LMD38_24660	COG0488	(ABC) transporter
LMD38_24670	COG0456	acetyltransferase
LMD38_24675	COG1214	PFAM Peptidase M22, glycoprotease
LMD38_24680	COG0802	atpase or kinase
LMD38_24775	COG2183	response to ionizing radiation
LMD38_24780	COG2337	Toxic component of a toxin-antitoxin (TA) module
LMD38_24785	COG0864	Transcriptional regulator
LMD38_24790	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
LMD38_24795	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
LMD38_24805	COG0705	Rhomboid family
LMD38_24810	COG4294	response to UV
LMD38_24820	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
LMD38_24830	COG2814	Major facilitator Superfamily
LMD38_24835	COG0531	amino acid
LMD38_24845	COG0179	Fumarylacetoacetate (FAA) hydrolase
LMD38_24850	COG3185	4-Hydroxyphenylpyruvate dioxygenase
LMD38_24880	COG0561	phosphatase activity
LMD38_24885	COG4608	Belongs to the ABC transporter superfamily
LMD38_24890	COG0444	Belongs to the ABC transporter superfamily
LMD38_24895	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMD38_24900	COG0601	transmembrane transport
LMD38_24905	COG0747	negative chemotaxis
LMD38_24910	COG0747	negative chemotaxis
LMD38_24920	COG0488	(ABC) transporter
LMD38_24945	COG5298	Protein conserved in bacteria
LMD38_24955	COG0084	hydrolase, TatD family'
LMD38_24965	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
LMD38_24975	COG1609	Transcriptional regulator
LMD38_24985	COG0204	Acyl-transferase
LMD38_25000	COG0697	spore germination
LMD38_25015	COG1910	domain protein
LMD38_25020	COG0725	ABC transporter, periplasmic molybdate-binding protein
LMD38_25025	COG4149	molybdate abc transporter
LMD38_25045	COG0656	L-ascorbic acid biosynthetic process
LMD38_25050	COG4166	transmembrane transport
LMD38_25055	COG4166	transmembrane transport
LMD38_25065	COG1309	transcriptional regulator
LMD38_25080	COG4166	transmembrane transport
LMD38_25085	COG4608	Belongs to the ABC transporter superfamily
LMD38_25090	COG0444	Belongs to the ABC transporter superfamily
LMD38_25095	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
LMD38_25100	COG0601	transmembrane transport
LMD38_25115	COG2814	Major facilitator Superfamily
LMD38_25125	COG2271	Major facilitator Superfamily
LMD38_25130	COG0277	FAD linked oxidase domain protein
LMD38_25140	COG0604	alcohol dehydrogenase
LMD38_25145	COG1464	Belongs to the NlpA lipoprotein family
LMD38_25155	COG2011	ABC-type metal ion transport system permease component
LMD38_25160	COG1028	Short-chain dehydrogenase reductase Sdr
LMD38_25320	COG4856	YbbR-like protein
LMD38_25325	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
LMD38_25405	COG0726	polysaccharide deacetylase
LMD38_25410	COG2194	sulfuric ester hydrolase activity
LMD38_25420	COG0489	protein tyrosine kinase activity
LMD38_25425	COG0860	N-Acetylmuramoyl-L-alanine amidase
LMD38_25450	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
LMD38_25480	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
LMD38_25485	COG0257	Belongs to the bacterial ribosomal protein bL36 family
LMD38_25495	COG0024	Methionine aminopeptidase
LMD38_25505	COG0201	protein transport
LMD38_25565	COG0255	Belongs to the universal ribosomal protein uL29 family
LMD38_25635	COG1358	cellular component organization or biogenesis
LMD38_25650	COG2813	Specifically methylates the guanine in position
LMD38_25670	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
LMD38_25675	COG0250	Participates in transcription elongation, termination and antitermination
LMD38_25680	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
LMD38_25695	COG3688	RNA-binding protein containing a PIN domain
LMD38_25700	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
LMD38_25715	COG1045	serine acetyltransferase
LMD38_25735	COG4956	integral membrane protein (PIN domain superfamily)
LMD38_25745	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
LMD38_25750	COG0542	response to heat
LMD38_25760	COG3880	PFAM UvrB UvrC protein
LMD38_25850	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
LMD38_25855	COG1396	sequence-specific DNA binding
LMD38_25860	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
LMD38_25865	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
LMD38_25870	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
LMD38_25875	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
LMD38_25880	COG0512	Glutamine amidotransferase of anthranilate synthase
LMD38_25885	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
LMD38_25890	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
LMD38_25905	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
LMD38_25910	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
LMD38_25920	COG2208	phosphoserine phosphatase activity
LMD38_25935	COG1098	S1 RNA binding domain
LMD38_25955	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
LMD38_25960	COG3956	TIGRFAM MazG family protein
LMD38_25965	COG2244	polysaccharide biosynthetic process
LMD38_25970	COG2002	toxin-antitoxin pair type II binding
LMD38_25975	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
LMD38_26005	COG0251	oxidation-reduction process
LMD38_26010	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
LMD38_26025	COG4466	Protein conserved in bacteria
LMD38_26040	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
LMD38_26045	COG0084	hydrolase, TatD family'
LMD38_26050	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMD38_26050	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
LMD38_26055	COG2002	toxin-antitoxin pair type II binding
LMD38_26060	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
LMD38_26070	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
LMD38_26080	COG1774	PSP1 C-terminal conserved region
LMD38_26085	COG0470	DNA polymerase III
LMD38_26095	COG1982	Orn Lys Arg decarboxylase major
LMD38_26150	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
LMD38_26160	COG0590	tRNA wobble adenosine to inosine editing
LMD38_26165	COG1335	isochorismatase
LMD38_26170	COG1428	Deoxynucleoside kinase
LMD38_26175	COG1428	Deoxynucleoside kinase
LMD38_26205	COG1686	Belongs to the peptidase S11 family
LMD38_26210	COG0516	GMP reductase activity
LMD38_26210	COG0517	IMP dehydrogenase activity
LMD38_26245	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
LMD38_26250	COG0187	DNA topoisomerase II activity
LMD38_26260	COG2501	S4 domain
LMD38_26265	COG0592	DNA-directed DNA polymerase activity
LMD38_26275	COG0230	Belongs to the bacterial ribosomal protein bL34 family
LMD38_26285	COG0706	membrane insertase activity
LMD38_26290	COG1847	R3H domain protein
LMD38_26315	COG1192	Involved in chromosome partitioning
LMD38_26320	COG1475	DNA binding
LMD38_26330	COG0668	transmembrane transport
LMD38_26335	COG4481	Protein conserved in bacteria
LMD38_26340	COG0012	GTP binding
LMD38_26360	COG4241	membrane
LMD38_26365	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
LMD38_26375	COG0305	Participates in initiation and elongation during chromosome replication
LMD38_26405	COG0745	RESPONSE REGULATOR receiver
LMD38_26410	COG5002	protein histidine kinase activity
LMD38_26415	COG4863	YycH protein
LMD38_26420	COG4853	Protein conserved in bacteria
LMD38_26425	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
LMD38_26430	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
LMD38_26450	COG1192	Involved in chromosome partitioning
LMD38_26485	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LMD38_26520	COG1164	Oligoendopeptidase f
LMD38_26540	COG1272	protein, Hemolysin III
LMD38_26555	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
LMD38_26600	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
LMD38_26605	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
LMD38_26610	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
LMD38_26615	COG2814	Major facilitator Superfamily
LMD38_26620	COG3275	phosphorelay sensor kinase activity
LMD38_26625	COG3279	Response regulator of the LytR AlgR family
LMD38_26640	COG0628	permease
LMD38_26645	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMD38_26645	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
LMD38_26650	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
LMD38_26655	COG1309	transcriptional regulator
LMD38_26660	COG0463	Glycosyl transferase, family 2
LMD38_26675	COG0488	(ABC) transporter
LMD38_26690	COG1216	Glycosyl transferase, family 2
LMD38_26700	COG1216	Glycosyl transferase, family 2
LMD38_26705	COG1607	acyl-coa hydrolase
LMD38_26740	COG0840	transmembrane signaling receptor activity
LMD38_26755	COG0438	transferase activity, transferring glycosyl groups
LMD38_26765	COG0477	Major facilitator Superfamily
LMD38_26770	COG3279	Response regulator of the LytR AlgR family
LMD38_26775	COG1966	Carbon starvation protein
LMD38_26780	COG2879	small protein
LMD38_26785	COG3706	GGDEF domain
LMD38_26790	COG0351	phosphomethylpyrimidine kinase
LMD38_26795	COG4585	Histidine kinase
LMD38_26795	COG2203	Gaf domain
LMD38_26800	COG2197	response regulator
LMD38_26810	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
LMD38_26815	COG1011	Hydrolase
LMD38_26820	COG2873	o-acetylhomoserine
LMD38_26830	COG0460	homoserine dehydrogenase
LMD38_26840	COG1609	Transcriptional regulator
LMD38_26845	COG2755	lipolytic protein G-D-S-L family
LMD38_26850	COG1131	(ABC) transporter
LMD38_26855	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
LMD38_26865	COG2814	Major facilitator Superfamily
LMD38_26870	COG0561	phosphatase activity
LMD38_26875	COG2233	PERMEase
LMD38_26890	COG2363	Small membrane protein
LMD38_26900	COG3773	Cell wall hydrolase
LMD38_26915	COG0280	phosphate acetyltransferase
LMD38_26935	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_26940	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
LMD38_26945	COG1120	ATPase activity
LMD38_26950	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
LMD38_26955	COG1078	dGTPase activity
LMD38_26965	COG1994	Peptidase M50
LMD38_26975	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
LMD38_26980	COG0584	glycerophosphoryl diester phosphodiesterase
LMD38_26985	COG0789	Transcriptional regulator
LMD38_26990	COG2814	Major facilitator Superfamily
LMD38_27015	COG1619	proteins homologs of microcin C7 resistance protein MccF
LMD38_27020	COG4506	Protein conserved in bacteria
LMD38_27035	COG0367	asparagine synthase
LMD38_27040	COG0583	DNA-binding transcription factor activity
LMD38_27060	COG0456	acetyltransferase
LMD38_27065	COG1846	Transcriptional regulator
LMD38_27070	COG2364	Membrane
LMD38_27075	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
LMD38_27080	COG2808	Putative FMN-binding domain
LMD38_27085	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
LMD38_27095	COG4974	Belongs to the 'phage' integrase family
LMD38_27110	COG2002	toxin-antitoxin pair type II binding
LMD38_27140	COG3344	reverse transcriptase
LMD38_27155	COG2311	Membrane
LMD38_27170	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
LMD38_27175	COG0583	DNA-binding transcription factor activity
LMD38_27465	COG3344	reverse transcriptase
LMD38_27615	COG1404	Belongs to the peptidase S8 family
LMD38_27690	COG0640	Transcriptional regulator
LMD38_27720	COG1388	LysM domain
LMD38_27720	COG0791	NLP P60 protein
LMD38_27720	COG3103	Sh3 type 3 domain protein
LMD38_27755	COG3397	chitin binding
LMD38_27785	COG3344	reverse transcriptase
LMD38_27790	COG3344	reverse transcriptase
LMD38_27935	COG0457	Tetratricopeptide repeat
LMD38_27980	COG4974	Belongs to the 'phage' integrase family
LMD38_27990	COG1609	Transcriptional regulator
LMD38_27995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
LMD38_27995	COG1263	PTS System
LMD38_28000	COG1621	beta-fructofuranosidase activity
LMD38_28005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
LMD38_28045	COG5002	protein histidine kinase activity
LMD38_28050	COG0745	RESPONSE REGULATOR receiver
LMD38_28055	COG4990	cell redox homeostasis
LMD38_28060	COG1335	isochorismatase
LMD38_28095	COG1181	Belongs to the D-alanine--D-alanine ligase family
LMD38_28095	COG2918	glutathione biosynthetic process
LMD38_28105	COG0627	Serine hydrolase involved in the detoxification of formaldehyde
LMD38_28115	COG1733	regulation of RNA biosynthetic process
LMD38_28135	COG0697	spore germination
LMD38_28160	COG2323	membrane
LMD38_28175	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
LMD38_28200	COG2323	membrane
LMD38_28205	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
LMD38_28220	COG3655	Transcriptional regulator
LMD38_28295	COG2207	Transcriptional regulator
LMD38_28295	COG3708	Transcriptional regulator
LMD38_28310	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
LMD38_28315	COG0463	Glycosyl transferase, family 2
LMD38_28320	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
LMD38_28325	COG2274	protein secretion by the type I secretion system
LMD38_28325	COG3271	cysteine-type peptidase activity
LMD38_28340	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
LMD38_28405	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
LMD38_28430	COG1349	DNA-binding transcription factor activity
LMD38_28450	COG1522	sequence-specific DNA binding
LMD38_28460	COG2824	Alkylphosphonate utilization operon protein PhnA
LMD38_28475	COG0659	secondary active sulfate transmembrane transporter activity
LMD38_28490	COG4990	cell redox homeostasis
LMD38_28515	COG0071	Belongs to the small heat shock protein (HSP20) family
LMD38_28520	COG2207	Transcriptional regulator
LMD38_28520	COG3708	Transcriptional regulator
LMD38_28555	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification