locus-tag class description BaLi_c00010 PF08299 Bacterial dnaA protein helix-turn-helix BaLi_c00010 PF00308 Bacterial dnaA protein BaLi_c00010 PF11638 DnaA N-terminal domain BaLi_c00020 PF02768 DNA polymerase III beta subunit, C-terminal domain BaLi_c00020 PF00712 DNA polymerase III beta subunit, N-terminal domain BaLi_c00020 PF02767 DNA polymerase III beta subunit, central domain BaLi_c00040 PF02463 RecF/RecN/SMC N terminal domain BaLi_c00050 PF04025 Domain of unknown function (DUF370) BaLi_c00060 PF01751 Toprim domain BaLi_c00060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c00060 PF00986 DNA gyrase B subunit, carboxyl terminus BaLi_c00060 PF00204 DNA gyrase B BaLi_c00070 PF00521 DNA gyrase/topoisomerase IV, subunit A BaLi_c00070 PF03989 DNA gyrase C-terminal domain, beta-propeller BaLi_c00130 PF14175 YaaC-like Protein BaLi_c00140 PF00478 IMP dehydrogenase / GMP reductase domain BaLi_c00140 PF00571 CBS domain BaLi_c00150 PF00768 D-alanyl-D-alanine carboxypeptidase BaLi_c00150 PF07943 Penicillin-binding protein 5, C-terminal domain BaLi_c00160 PF01680 SOR/SNZ family BaLi_c00170 PF01174 SNO glutamine amidotransferase family BaLi_c00180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BaLi_c00180 PF02403 Seryl-tRNA synthetase N-terminal domain BaLi_c00190 PF02595 Glycerate kinase family BaLi_c00200 PF02447 GntP family permease BaLi_c00210 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c00210 PF17853 GGDEF-like domain BaLi_c00210 PF05651 Putative sugar diacid recognition BaLi_c00240 PF01712 Deoxynucleoside kinase BaLi_c00250 PF01712 Deoxynucleoside kinase BaLi_c00260 PF00704 Glycosyl hydrolases family 18 BaLi_c00260 PF01476 LysM domain BaLi_c00270 PF00857 Isochorismatase family BaLi_c00280 PF14437 MafB19-like deaminase BaLi_c00300 PF12169 DNA polymerase III subunits gamma and tau domain III BaLi_c00310 PF02575 YbaB/EbfC DNA-binding family BaLi_c00320 PF02132 RecR protein BaLi_c00320 PF13662 Toprim domain BaLi_c00330 PF07441 SigmaK-factor processing regulatory protein BofA BaLi_c00390 PF10764 Inhibitor of sigma-G Gin BaLi_c00400 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein BaLi_c00410 PF05816 Toxic anion resistance protein (TelA) BaLi_c00420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BaLi_c00420 PF01276 Orn/Lys/Arg decarboxylase, major domain BaLi_c00430 PF02223 Thymidylate kinase BaLi_c00440 PF06153 Cyclic-di-AMP receptor BaLi_c00450 PF03885 Protein of unknown function (DUF327) BaLi_c00460 PF09115 DNA polymerase III, delta subunit, C terminal BaLi_c00470 PF04468 PSP1 C-terminal conserved region BaLi_c00480 PF06156 Initiation control protein YabA BaLi_c00490 PF05175 Methyltransferase small domain BaLi_c00500 PF01541 GIY-YIG catalytic domain BaLi_c00510 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BaLi_c00520 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BaLi_c00520 PF18277 AbrB C-terminal domain BaLi_c00530 PF01588 Putative tRNA binding domain BaLi_c00530 PF09334 tRNA synthetases class I (M) BaLi_c00530 PF08264 Anticodon-binding domain of tRNA BaLi_c00540 PF01026 TatD related DNase BaLi_c00550 PF07501 G5 domain BaLi_c00550 PF06725 3D domain BaLi_c00550 PF03990 G5-linked-Ubiquitin-like domain BaLi_c00560 PF13662 Toprim domain BaLi_c00560 PF13331 Domain of unknown function (DUF4093) BaLi_c00570 PF00398 Ribosomal RNA adenine dimethylase BaLi_c00580 PF05582 YabG peptidase U57 BaLi_c00590 PF06257 Biofilm formation stimulator VEG BaLi_c00600 PF00269 Small, acid-soluble spore proteins, alpha/beta type BaLi_c00610 PF00288 GHMP kinases N terminal domain BaLi_c00610 PF08544 GHMP kinases C terminal BaLi_c00620 PF09182 Bacterial purine repressor, N-terminal BaLi_c00620 PF00156 Phosphoribosyl transferase domain BaLi_c00630 PF01042 Endoribonuclease L-PSP BaLi_c00640 PF04026 SpoVG BaLi_c00650 PF00483 Nucleotidyl transferase BaLi_c00650 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c00660 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BaLi_c00660 PF14572 Phosphoribosyl synthetase-associated domain BaLi_c00670 PF14693 Ribosomal protein TL5, C-terminal domain BaLi_c00670 PF01386 Ribosomal L25p family BaLi_c00680 PF01195 Peptidyl-tRNA hydrolase BaLi_c00690 PF10955 Protein of unknown function (DUF2757) BaLi_c00700 PF00270 DEAD/DEAH box helicase BaLi_c00700 PF00271 Helicase conserved C-terminal domain BaLi_c00700 PF03461 TRCF domain BaLi_c00700 PF02559 CarD-like/TRCF domain BaLi_c00700 PF17757 UvrB interaction domain BaLi_c00710 PF15714 Stage V sporulation protein T C-terminal, transcription factor BaLi_c00710 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BaLi_c00720 PF01943 Polysaccharide biosynthesis protein BaLi_c00720 PF14667 Polysaccharide biosynthesis C-terminal domain BaLi_c00730 PF03819 MazG nucleotide pyrophosphohydrolase domain BaLi_c00730 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BaLi_c00740 PF01479 S4 domain BaLi_c00750 PF07873 YabP family BaLi_c00760 PF09578 Spore cortex protein YabQ (Spore_YabQ) BaLi_c00770 PF04977 Septum formation initiator BaLi_c00780 PF00575 S1 RNA binding domain BaLi_c00810 PF07228 Stage II sporulation protein E (SpoIIE) BaLi_c00820 PF00092 von Willebrand factor type A domain BaLi_c00830 PF00069 Protein kinase domain BaLi_c00840 PF11734 TilS substrate C-terminal domain BaLi_c00840 PF09179 TilS substrate binding domain BaLi_c00840 PF01171 PP-loop family BaLi_c00860 PF01434 Peptidase family M41 BaLi_c00860 PF06480 FtsH Extracellular BaLi_c00860 PF17862 AAA+ lid domain BaLi_c00860 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c00870 PF03309 Type III pantothenate kinase BaLi_c00880 PF01430 Hsp33 protein BaLi_c00890 PF13145 PPIC-type PPIASE domain BaLi_c00900 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c00910 PF04715 Anthranilate synthase component I, N terminal region BaLi_c00910 PF00425 chorismate binding enzyme BaLi_c00920 PF00117 Glutamine amidotransferase class-I BaLi_c00930 PF01063 Amino-transferase class IV BaLi_c00940 PF00809 Pterin binding enzyme BaLi_c00950 PF02152 Dihydroneopterin aldolase BaLi_c00960 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BaLi_c00970 PF01207 Dihydrouridine synthase (Dus) BaLi_c00980 PF01336 OB-fold nucleic acid binding domain BaLi_c00980 PF00152 tRNA synthetases class II (D, K and N) BaLi_c01020 PF05848 CtsR N-terminal HTH domain BaLi_c01020 PF17727 CtsR C-terminal dimerization domain BaLi_c01030 PF02151 UvrB/uvrC motif BaLi_c01040 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BaLi_c01050 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c01050 PF10431 C-terminal, D2-small domain, of ClpB protein BaLi_c01050 PF02861 Clp amino terminal domain, pathogenicity island component BaLi_c01050 PF17871 AAA lid domain BaLi_c01050 PF07724 AAA domain (Cdc48 subfamily) BaLi_c01060 PF18073 Rubredoxin metal binding domain BaLi_c01070 PF10635 DisA bacterial checkpoint controller linker region BaLi_c01070 PF02457 DisA bacterial checkpoint controller nucleotide-binding BaLi_c01090 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BaLi_c01100 PF02542 YgbB family BaLi_c01110 PF00749 tRNA synthetases class I (E and Q), catalytic domain BaLi_c01120 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c01130 PF09190 DALR domain BaLi_c01130 PF01406 tRNA synthetases class I (C) catalytic domain BaLi_c01140 PF00636 Ribonuclease III domain BaLi_c01150 PF08032 RNA 2'-O ribose methyltransferase substrate binding BaLi_c01150 PF00588 SpoU rRNA Methylase family BaLi_c01160 PF05991 YacP-like NYN domain BaLi_c01170 PF08281 Sigma-70, region 4 BaLi_c01170 PF04542 Sigma-70 region 2 BaLi_c01180 PF00471 Ribosomal protein L33 BaLi_c01190 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BaLi_c01200 PF00467 KOW motif BaLi_c01200 PF02357 Transcription termination factor nusG BaLi_c01210 PF03946 Ribosomal protein L11, N-terminal domain BaLi_c01210 PF00298 Ribosomal protein L11, RNA binding domain BaLi_c01220 PF00687 Ribosomal protein L1p/L10e family BaLi_c01230 PF00466 Ribosomal protein L10 BaLi_c01240 PF16320 Ribosomal protein L7/L12 dimerisation domain BaLi_c01240 PF00542 Ribosomal protein L7/L12 C-terminal domain BaLi_c01250 PF05175 Methyltransferase small domain BaLi_c01260 PF04563 RNA polymerase beta subunit BaLi_c01260 PF10385 RNA polymerase beta subunit external 1 domain BaLi_c01260 PF04565 RNA polymerase Rpb2, domain 3 BaLi_c01260 PF04560 RNA polymerase Rpb2, domain 7 BaLi_c01260 PF00562 RNA polymerase Rpb2, domain 6 BaLi_c01260 PF04561 RNA polymerase Rpb2, domain 2 BaLi_c01270 PF05000 RNA polymerase Rpb1, domain 4 BaLi_c01270 PF04998 RNA polymerase Rpb1, domain 5 BaLi_c01270 PF04983 RNA polymerase Rpb1, domain 3 BaLi_c01270 PF00623 RNA polymerase Rpb1, domain 2 BaLi_c01270 PF04997 RNA polymerase Rpb1, domain 1 BaLi_c01280 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BaLi_c01290 PF00164 Ribosomal protein S12/S23 BaLi_c01300 PF00177 Ribosomal protein S7p/S5e BaLi_c01310 PF03144 Elongation factor Tu domain 2 BaLi_c01310 PF14492 Elongation Factor G, domain II BaLi_c01310 PF00679 Elongation factor G C-terminus BaLi_c01310 PF00009 Elongation factor Tu GTP binding domain BaLi_c01310 PF03764 Elongation factor G, domain IV BaLi_c01320 PF03144 Elongation factor Tu domain 2 BaLi_c01320 PF00009 Elongation factor Tu GTP binding domain BaLi_c01320 PF03143 Elongation factor Tu C-terminal domain BaLi_c01330 PF00338 Ribosomal protein S10p/S20e BaLi_c01340 PF00297 Ribosomal protein L3 BaLi_c01350 PF00573 Ribosomal protein L4/L1 family BaLi_c01360 PF00276 Ribosomal protein L23 BaLi_c01370 PF00181 Ribosomal Proteins L2, RNA binding domain BaLi_c01370 PF03947 Ribosomal Proteins L2, C-terminal domain BaLi_c01380 PF00203 Ribosomal protein S19 BaLi_c01390 PF00237 Ribosomal protein L22p/L17e BaLi_c01400 PF07650 KH domain BaLi_c01400 PF00189 Ribosomal protein S3, C-terminal domain BaLi_c01410 PF00252 Ribosomal protein L16p/L10e BaLi_c01420 PF00831 Ribosomal L29 protein BaLi_c01430 PF00366 Ribosomal protein S17 BaLi_c01440 PF00238 Ribosomal protein L14p/L23e BaLi_c01450 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BaLi_c01450 PF00467 KOW motif BaLi_c01460 PF00673 ribosomal L5P family C-terminus BaLi_c01460 PF00281 Ribosomal protein L5 BaLi_c01470 PF00253 Ribosomal protein S14p/S29e BaLi_c01480 PF00410 Ribosomal protein S8 BaLi_c01490 PF00347 Ribosomal protein L6 BaLi_c01500 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BaLi_c01510 PF03719 Ribosomal protein S5, C-terminal domain BaLi_c01510 PF00333 Ribosomal protein S5, N-terminal domain BaLi_c01520 PF00327 Ribosomal protein L30p/L7e BaLi_c01530 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BaLi_c01540 PF00344 SecY translocase BaLi_c01550 PF05191 Adenylate kinase, active site lid BaLi_c01560 PF00557 Metallopeptidase family M24 BaLi_c01580 PF01176 Translation initiation factor 1A / IF-1 BaLi_c01590 PF00444 Ribosomal protein L36 BaLi_c01600 PF00416 Ribosomal protein S13/S18 BaLi_c01610 PF00411 Ribosomal protein S11 BaLi_c01620 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BaLi_c01620 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BaLi_c01620 PF01000 RNA polymerase Rpb3/RpoA insert domain BaLi_c01630 PF01196 Ribosomal protein L17 BaLi_c01640 PF00005 ABC transporter BaLi_c01650 PF00005 ABC transporter BaLi_c01660 PF02361 Cobalt transport protein BaLi_c01670 PF01416 tRNA pseudouridine synthase BaLi_c01680 PF00572 Ribosomal protein L13 BaLi_c01690 PF00380 Ribosomal protein S9/S16 BaLi_c01730 PF05163 DinB family BaLi_c01740 PF00082 Subtilase family BaLi_c01770 PF00005 ABC transporter BaLi_c01810 PF00005 ABC transporter BaLi_c01830 PF03412 Peptidase C39 family BaLi_c01830 PF00005 ABC transporter BaLi_c01830 PF00664 ABC transporter transmembrane region BaLi_c01880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c01880 PF00989 PAS fold BaLi_c01880 PF17203 Single cache domain 3 BaLi_c01880 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BaLi_c01910 PF10730 Protein of unknown function (DUF2521) BaLi_c01920 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c01930 PF10609 NUBPL iron-transfer P-loop NTPase BaLi_c01940 PF17898 Spore germination GerD central core domain BaLi_c01950 PF14089 KinB-signalling pathway activation in sporulation BaLi_c01960 PF01522 Polysaccharide deacetylase BaLi_c02020 PF00144 Beta-lactamase BaLi_c02040 PF01758 Sodium Bile acid symporter family BaLi_c02050 PF17369 Family of unknown function (DUF5391) BaLi_c02060 PF02567 Phenazine biosynthesis-like protein BaLi_c02070 PF07075 Protein of unknown function (DUF1343) BaLi_c02080 PF01915 Glycosyl hydrolase family 3 C-terminal domain BaLi_c02080 PF00933 Glycosyl hydrolase family 3 N terminal domain BaLi_c02090 PF00144 Beta-lactamase BaLi_c02100 PF02378 Phosphotransferase system, EIIC BaLi_c02100 PF00367 phosphotransferase system, EIIB BaLi_c02110 PF01380 SIS domain BaLi_c02110 PF01418 Helix-turn-helix domain, rpiR family BaLi_c02120 PF01380 SIS domain BaLi_c02130 PF04463 Protein of unknown function (DUF523) BaLi_c02190 PF00491 Arginase family BaLi_c02200 PF04542 Sigma-70 region 2 BaLi_c02200 PF08281 Sigma-70, region 4 BaLi_c02210 PF13490 Putative zinc-finger BaLi_c02220 PF02457 DisA bacterial checkpoint controller nucleotide-binding BaLi_c02230 PF07949 YbbR-like protein BaLi_c02240 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BaLi_c02240 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BaLi_c02240 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BaLi_c02240 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BaLi_c02250 PF01380 SIS domain BaLi_c02280 PF00005 ABC transporter BaLi_c02290 PF00392 Bacterial regulatory proteins, gntR family BaLi_c02310 PF07690 Major Facilitator Superfamily BaLi_c02320 PF08361 MAATS-type transcriptional repressor, C-terminal region BaLi_c02320 PF00440 Bacterial regulatory proteins, tetR family BaLi_c02350 PF00005 ABC transporter BaLi_c02350 PF00664 ABC transporter transmembrane region BaLi_c02360 PF01323 DSBA-like thioredoxin domain BaLi_c02380 PF05139 Erythromycin esterase BaLi_c02400 PF04439 Streptomycin adenylyltransferase BaLi_c02420 PF13419 Haloacid dehalogenase-like hydrolase BaLi_c02440 PF03466 LysR substrate binding domain BaLi_c02440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c02460 PF07690 Major Facilitator Superfamily BaLi_c02470 PF17334 Minor curli fiber component A BaLi_c02480 PF17340 Family of unknown function (DUF5370) BaLi_c02500 PF03190 Protein of unknown function, DUF255 BaLi_c02510 PF00892 EamA-like transporter family BaLi_c02520 PF13411 MerR HTH family regulatory protein BaLi_c02550 PF08241 Methyltransferase domain BaLi_c02580 PF00881 Nitroreductase family BaLi_c02590 PF00392 Bacterial regulatory proteins, gntR family BaLi_c02590 PF07729 FCD domain BaLi_c02600 PF01925 Sulfite exporter TauE/SafE BaLi_c02640 PF02690 Na+/Pi-cotransporter BaLi_c02650 PF05360 yiaA/B two helix domain BaLi_c02700 PF00892 EamA-like transporter family BaLi_c02710 PF12833 Helix-turn-helix domain BaLi_c02710 PF02311 AraC-like ligand binding domain BaLi_c02760 PF00465 Iron-containing alcohol dehydrogenase BaLi_c02800 PF10710 Protein of unknown function (DUF2512) BaLi_c02810 PF00324 Amino acid permease BaLi_c02820 PF02574 Homocysteine S-methyltransferase BaLi_c02830 PF04794 YdjC-like protein BaLi_c02840 PF00367 phosphotransferase system, EIIB BaLi_c02840 PF02378 Phosphotransferase system, EIIC BaLi_c02850 PF07739 TipAS antibiotic-recognition domain BaLi_c02850 PF13411 MerR HTH family regulatory protein BaLi_c02860 PF04239 Protein of unknown function (DUF421) BaLi_c02870 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c02900 PF10990 Protein of unknown function (DUF2809) BaLi_c02910 PF01235 Sodium:alanine symporter family BaLi_c02920 PF04960 Glutaminase BaLi_c02930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c02940 PF00072 Response regulator receiver domain BaLi_c02940 PF08664 YcbB domain BaLi_c02950 PF13302 Acetyltransferase (GNAT) domain BaLi_c02960 PF05569 BlaR1 peptidase M56 BaLi_c02960 PF00905 Penicillin binding protein transpeptidase domain BaLi_c02970 PF03965 Penicillinase repressor BaLi_c02990 PF09423 PhoD-like phosphatase BaLi_c02990 PF16655 PhoD-like phosphatase, N-terminal domain BaLi_c03000 PF02416 mttA/Hcf106 family BaLi_c03010 PF00902 Sec-independent protein translocase protein (TatC) BaLi_c03020 PF00701 Dihydrodipicolinate synthetase family BaLi_c03030 PF00171 Aldehyde dehydrogenase family BaLi_c03040 PF07690 Major Facilitator Superfamily BaLi_c03050 PF13378 Enolase C-terminal domain-like BaLi_c03060 PF00392 Bacterial regulatory proteins, gntR family BaLi_c03060 PF07729 FCD domain BaLi_c03070 PF08666 SAF domain BaLi_c03070 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BaLi_c03110 PF00486 Transcriptional regulatory protein, C terminal BaLi_c03110 PF00072 Response regulator receiver domain BaLi_c03120 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c03130 PF00005 ABC transporter BaLi_c03160 PF13039 Protein of unknown function (DUF3900) BaLi_c03160 PF13037 Domain of unknown function (DUF3898) BaLi_c03170 PF16226 Domain of unknown function (DUF4885) BaLi_c03180 PF01636 Phosphotransferase enzyme family BaLi_c03190 PF01047 MarR family BaLi_c03200 PF00501 AMP-binding enzyme BaLi_c03200 PF13193 AMP-binding enzyme C-terminal domain BaLi_c03240 PF13411 MerR HTH family regulatory protein BaLi_c03240 PF07739 TipAS antibiotic-recognition domain BaLi_c03250 PF13847 Methyltransferase domain BaLi_c03250 PF03551 Transcriptional regulator PadR-like family BaLi_c03270 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein BaLi_c03280 PF00892 EamA-like transporter family BaLi_c03300 PF05225 helix-turn-helix, Psq domain BaLi_c03300 PF02810 SEC-C motif BaLi_c03310 PF00005 ABC transporter BaLi_c03340 PF00072 Response regulator receiver domain BaLi_c03340 PF00486 Transcriptional regulatory protein, C terminal BaLi_c03350 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c03350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c03360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c03360 PF03466 LysR substrate binding domain BaLi_c03370 PF14552 Tautomerase enzyme BaLi_c03400 PF17118 Domain of unknown function (DUF5105) BaLi_c03400 PF11611 Domain of unknown function (DUF4352) BaLi_c03410 PF03606 C4-dicarboxylate anaerobic carrier BaLi_c03430 PF00710 Asparaginase, N-terminal BaLi_c03430 PF17763 Glutaminase/Asparaginase C-terminal domain BaLi_c03440 PF00583 Acetyltransferase (GNAT) family BaLi_c03450 PF01425 Amidase BaLi_c03460 PF08439 Oligopeptidase F BaLi_c03460 PF01432 Peptidase family M3 BaLi_c03470 PF04226 Transglycosylase associated protein BaLi_c03490 PF13183 4Fe-4S dicluster domain BaLi_c03490 PF02754 Cysteine-rich domain BaLi_c03500 PF02913 FAD linked oxidases, C-terminal domain BaLi_c03500 PF01565 FAD binding domain BaLi_c03510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c03520 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BaLi_c03530 PF02378 Phosphotransferase system, EIIC BaLi_c03540 PF11975 Family 4 glycosyl hydrolase C-terminal domain BaLi_c03540 PF02056 Family 4 glycosyl hydrolase BaLi_c03560 PF04794 YdjC-like protein BaLi_c03570 PF00041 Fibronectin type III domain BaLi_c03570 PF00704 Glycosyl hydrolases family 18 BaLi_c03580 PF06483 Chitinase C BaLi_c03580 PF00704 Glycosyl hydrolases family 18 BaLi_c03590 PF00089 Trypsin BaLi_c03620 PF16244 Domain of unknown function (DUF4901) BaLi_c03630 PF00581 Rhodanese-like domain BaLi_c03640 PF07486 Cell Wall Hydrolase BaLi_c03650 PF00296 Luciferase-like monooxygenase BaLi_c03660 PF00877 NlpC/P60 family BaLi_c03680 PF13732 Domain of unknown function (DUF4162) BaLi_c03680 PF00005 ABC transporter BaLi_c03690 PF00440 Bacterial regulatory proteins, tetR family BaLi_c03690 PF17932 Tetracyclin repressor-like, C-terminal domain BaLi_c03710 PF02342 TerD domain BaLi_c03720 PF02342 TerD domain BaLi_c03730 PF02342 TerD domain BaLi_c03740 PF03741 Integral membrane protein TerC family BaLi_c03770 PF14266 Putative component of 'biosynthetic module' BaLi_c03780 PF05816 Toxic anion resistance protein (TelA) BaLi_c03790 PF02683 Cytochrome C biogenesis protein transmembrane region BaLi_c03810 PF07690 Major Facilitator Superfamily BaLi_c03820 PF00056 lactate/malate dehydrogenase, NAD binding domain BaLi_c03820 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BaLi_c03830 PF02652 L-lactate permease BaLi_c03840 PF01810 LysE type translocator BaLi_c03850 PF00324 Amino acid permease BaLi_c03860 PF02540 NAD synthase BaLi_c03870 PF01202 Shikimate kinase BaLi_c03880 PF10127 RNA repair pathway DNA polymerase beta family BaLi_c03890 PF01619 Proline dehydrogenase BaLi_c03900 PF00171 Aldehyde dehydrogenase family BaLi_c03910 PF00474 Sodium:solute symporter family BaLi_c03920 PF17853 GGDEF-like domain BaLi_c03920 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c03930 PF09323 Domain of unknown function (DUF1980) BaLi_c03940 PF03773 Predicted permease BaLi_c03950 PF05448 Acetyl xylan esterase (AXE1) BaLi_c03990 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c04000 PF00497 Bacterial extracellular solute-binding proteins, family 3 BaLi_c04010 PF02525 Flavodoxin-like fold BaLi_c04020 PF00005 ABC transporter BaLi_c04030 PF00232 Glycosyl hydrolase family 1 BaLi_c04040 PF11033 Competence protein J (ComJ) BaLi_c04050 PF14040 Deoxyribonuclease NucA/NucB BaLi_c04060 PF03793 PASTA domain BaLi_c04060 PF00069 Protein kinase domain BaLi_c04070 PF04740 LXG domain of WXG superfamily BaLi_c04070 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BaLi_c04070 PF14449 Pre-toxin TG BaLi_c04080 PF05378 Hydantoinase/oxoprolinase N-terminal region BaLi_c04080 PF01968 Hydantoinase/oxoprolinase BaLi_c04090 PF02538 Hydantoinase B/oxoprolinase BaLi_c04110 PF00005 ABC transporter BaLi_c04110 PF08402 TOBE domain BaLi_c04120 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c04130 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c04140 PF00550 Phosphopantetheine attachment site BaLi_c04140 PF13193 AMP-binding enzyme C-terminal domain BaLi_c04140 PF00668 Condensation domain BaLi_c04140 PF00501 AMP-binding enzyme BaLi_c04150 PF00501 AMP-binding enzyme BaLi_c04150 PF13193 AMP-binding enzyme C-terminal domain BaLi_c04150 PF00668 Condensation domain BaLi_c04150 PF00550 Phosphopantetheine attachment site BaLi_c04170 PF00975 Thioesterase domain BaLi_c04170 PF13193 AMP-binding enzyme C-terminal domain BaLi_c04170 PF00550 Phosphopantetheine attachment site BaLi_c04170 PF00501 AMP-binding enzyme BaLi_c04170 PF00668 Condensation domain BaLi_c04180 PF00975 Thioesterase domain BaLi_c04190 PF00892 EamA-like transporter family BaLi_c04200 PF00392 Bacterial regulatory proteins, gntR family BaLi_c04200 PF00155 Aminotransferase class I and II BaLi_c04210 PF01648 4'-phosphopantetheinyl transferase superfamily BaLi_c04220 PF00756 Putative esterase BaLi_c04230 PF12833 Helix-turn-helix domain BaLi_c04230 PF06445 GyrI-like small molecule binding domain BaLi_c04290 PF00672 HAMP domain BaLi_c04290 PF02743 Cache domain BaLi_c04290 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c04300 PF00005 ABC transporter BaLi_c04310 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c04320 PF00497 Bacterial extracellular solute-binding proteins, family 3 BaLi_c04330 PF13426 PAS domain BaLi_c04330 PF02954 Bacterial regulatory protein, Fis family BaLi_c04330 PF00158 Sigma-54 interaction domain BaLi_c04340 PF00202 Aminotransferase class-III BaLi_c04350 PF00324 Amino acid permease BaLi_c04360 PF00491 Arginase family BaLi_c04370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c04370 PF03466 LysR substrate binding domain BaLi_c04380 PF02441 Flavoprotein BaLi_c04390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase BaLi_c04560 PF04740 LXG domain of WXG superfamily BaLi_c04560 PF14449 Pre-toxin TG BaLi_c04600 PF02743 Cache domain BaLi_c04600 PF00672 HAMP domain BaLi_c04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c04600 PF06580 Histidine kinase BaLi_c04610 PF12833 Helix-turn-helix domain BaLi_c04610 PF00072 Response regulator receiver domain BaLi_c04620 PF13407 Periplasmic binding protein domain BaLi_c04630 PF00005 ABC transporter BaLi_c04640 PF02653 Branched-chain amino acid transport system / permease component BaLi_c04650 PF07690 Major Facilitator Superfamily BaLi_c04660 PF00583 Acetyltransferase (GNAT) family BaLi_c04660 PF01047 MarR family BaLi_c04670 PF08532 Beta-galactosidase trimerisation domain BaLi_c04670 PF08533 Beta-galactosidase C-terminal domain BaLi_c04670 PF02449 Beta-galactosidase BaLi_c04690 PF02333 Phytase BaLi_c04710 PF00854 POT family BaLi_c04720 PF13229 Right handed beta helix region BaLi_c04720 PF12708 Pectate lyase superfamily protein BaLi_c04740 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c04750 PF05504 Spore germination B3/ GerAC like, C-terminal BaLi_c04760 PF03845 Spore germination protein BaLi_c04770 PF13411 MerR HTH family regulatory protein BaLi_c04770 PF07739 TipAS antibiotic-recognition domain BaLi_c04780 PF00005 ABC transporter BaLi_c04790 PF12704 MacB-like periplasmic core domain BaLi_c04790 PF02687 FtsX-like permease family BaLi_c04800 PF00486 Transcriptional regulatory protein, C terminal BaLi_c04800 PF00072 Response regulator receiver domain BaLi_c04810 PF00672 HAMP domain BaLi_c04810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c04810 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c04820 PF00672 HAMP domain BaLi_c04820 PF12729 Four helix bundle sensory module for signal transduction BaLi_c04820 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c04830 PF00696 Amino acid kinase family BaLi_c04830 PF13840 ACT domain BaLi_c04840 PF01032 FecCD transport family BaLi_c04850 PF01032 FecCD transport family BaLi_c04860 PF00005 ABC transporter BaLi_c04870 PF01497 Periplasmic binding protein BaLi_c04880 PF07690 Major Facilitator Superfamily BaLi_c04890 PF00440 Bacterial regulatory proteins, tetR family BaLi_c04910 PF00881 Nitroreductase family BaLi_c04920 PF03992 Antibiotic biosynthesis monooxygenase BaLi_c04930 PF01022 Bacterial regulatory protein, arsR family BaLi_c04940 PF00155 Aminotransferase class I and II BaLi_c04940 PF00392 Bacterial regulatory proteins, gntR family BaLi_c04950 PF00202 Aminotransferase class-III BaLi_c04960 PF13520 Amino acid permease BaLi_c04970 PF00171 Aldehyde dehydrogenase family BaLi_c04980 PF00892 EamA-like transporter family BaLi_c05000 PF07987 Domain of unkown function (DUF1775) BaLi_c05010 PF13115 YtkA-like BaLi_c05010 PF05425 Copper resistance protein D BaLi_c05010 PF04234 CopC domain BaLi_c05020 PF05573 NosL BaLi_c05020 PF08220 DeoR-like helix-turn-helix domain BaLi_c05030 PF18267 Rubredoxin NAD+ reductase C-terminal domain BaLi_c05030 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c05030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BaLi_c05030 PF04324 BFD-like [2Fe-2S] binding domain BaLi_c05040 PF00384 Molybdopterin oxidoreductase BaLi_c05040 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BaLi_c05040 PF01568 Molydopterin dinucleotide binding domain BaLi_c05050 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BaLi_c05050 PF18267 Rubredoxin NAD+ reductase C-terminal domain BaLi_c05050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c05050 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BaLi_c05050 PF04324 BFD-like [2Fe-2S] binding domain BaLi_c05060 PF00355 Rieske [2Fe-2S] domain BaLi_c05070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BaLi_c05080 PF00392 Bacterial regulatory proteins, gntR family BaLi_c05080 PF07729 FCD domain BaLi_c05090 PF00939 Sodium:sulfate symporter transmembrane region BaLi_c05100 PF07977 FabA-like domain BaLi_c05110 PF01980 tRNA-methyltransferase O BaLi_c05120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c05150 PF00456 Transketolase, thiamine diphosphate binding domain BaLi_c05160 PF02779 Transketolase, pyrimidine binding domain BaLi_c05160 PF02780 Transketolase, C-terminal domain BaLi_c05180 PF03746 LamB/YcsF family BaLi_c05190 PF01566 Natural resistance-associated macrophage protein BaLi_c05200 PF07286 Protein of unknown function (DUF1445) BaLi_c05210 PF02682 Carboxyltransferase domain, subdomain C and D BaLi_c05220 PF02626 Carboxyltransferase domain, subdomain A and B BaLi_c05230 PF09339 IclR helix-turn-helix domain BaLi_c05230 PF01614 Bacterial transcriptional regulator BaLi_c05240 PF13472 GDSL-like Lipase/Acylhydrolase family BaLi_c05260 PF02378 Phosphotransferase system, EIIC BaLi_c05260 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c05270 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c05280 PF08125 Mannitol dehydrogenase C-terminal domain BaLi_c05280 PF01232 Mannitol dehydrogenase Rossmann domain BaLi_c05290 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c05290 PF05043 Mga helix-turn-helix domain BaLi_c05290 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c05290 PF00874 PRD domain BaLi_c05290 PF08279 HTH domain BaLi_c05330 PF16242 Pyridoxamine 5'-phosphate oxidase like BaLi_c05350 PF10997 Alternate to MurJ BaLi_c05360 PF03816 Cell envelope-related transcriptional attenuator domain BaLi_c05370 PF12823 Domain of unknown function (DUF3817) BaLi_c05390 PF01037 Lrp/AsnC ligand binding domain BaLi_c05400 PF01131 DNA topoisomerase BaLi_c05400 PF01751 Toprim domain BaLi_c05410 PF02153 Prephenate dehydrogenase BaLi_c05420 PF00117 Glutamine amidotransferase class-I BaLi_c05420 PF00425 chorismate binding enzyme BaLi_c05420 PF04715 Anthranilate synthase component I, N terminal region BaLi_c05430 PF01817 Chorismate mutase type II BaLi_c05450 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BaLi_c05450 PF00205 Thiamine pyrophosphate enzyme, central domain BaLi_c05450 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BaLi_c05460 PF18416 N-acetylglucosamine binding protein domain 2 BaLi_c05460 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading BaLi_c05480 PF13302 Acetyltransferase (GNAT) domain BaLi_c05490 PF01566 Natural resistance-associated macrophage protein BaLi_c05500 PF04226 Transglycosylase associated protein BaLi_c05510 PF10415 Fumarase C C-terminus BaLi_c05510 PF00206 Lyase BaLi_c05520 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BaLi_c05530 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BaLi_c05540 PF12787 EcsC protein family BaLi_c05560 PF07883 Cupin domain BaLi_c05580 PF01594 AI-2E family transporter BaLi_c05590 PF00375 Sodium:dicarboxylate symporter family BaLi_c05600 PF00005 ABC transporter BaLi_c05630 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c05630 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c05630 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c05640 PF00085 Thioredoxin BaLi_c05650 PF01820 D-ala D-ala ligase N-terminus BaLi_c05650 PF07478 D-ala D-ala ligase C-terminus BaLi_c05660 PF08245 Mur ligase middle domain BaLi_c05660 PF02875 Mur ligase family, glutamate ligase domain BaLi_c05660 PF01225 Mur ligase family, catalytic domain BaLi_c05670 PF12146 Serine aminopeptidase, S33 BaLi_c05680 PF00271 Helicase conserved C-terminal domain BaLi_c05680 PF00270 DEAD/DEAH box helicase BaLi_c05690 PF03703 Bacterial PH domain BaLi_c05700 PF03703 Bacterial PH domain BaLi_c05710 PF01694 Rhomboid family BaLi_c05730 PF00842 Alanine racemase, C-terminal domain BaLi_c05730 PF01168 Alanine racemase, N-terminal domain BaLi_c05740 PF01402 Ribbon-helix-helix protein, copG family BaLi_c05750 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BaLi_c05760 PF08678 Rsbr N terminal BaLi_c05760 PF01740 STAS domain BaLi_c05770 PF01740 STAS domain BaLi_c05780 PF13581 Histidine kinase-like ATPase domain BaLi_c05790 PF07228 Stage II sporulation protein E (SpoIIE) BaLi_c05790 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BaLi_c05800 PF01740 STAS domain BaLi_c05810 PF13581 Histidine kinase-like ATPase domain BaLi_c05820 PF04542 Sigma-70 region 2 BaLi_c05820 PF04539 Sigma-70 region 3 BaLi_c05820 PF04545 Sigma-70, region 4 BaLi_c05830 PF07228 Stage II sporulation protein E (SpoIIE) BaLi_c05840 PF09371 Tex-like protein N-terminal domain BaLi_c05840 PF16921 Tex protein YqgF-like domain BaLi_c05840 PF00575 S1 RNA binding domain BaLi_c05840 PF17674 HHH domain BaLi_c05850 PF00440 Bacterial regulatory proteins, tetR family BaLi_c05870 PF03176 MMPL family BaLi_c05890 PF10263 SprT-like family BaLi_c05970 PF00457 Glycosyl hydrolases family 11 BaLi_c06000 PF01381 Helix-turn-helix BaLi_c06010 PF00487 Fatty acid desaturase BaLi_c06020 PF00313 'Cold-shock' DNA-binding domain BaLi_c06110 PF01047 MarR family BaLi_c06120 PF00583 Acetyltransferase (GNAT) family BaLi_c06130 PF04299 Putative FMN-binding domain BaLi_c06150 PF01638 HxlR-like helix-turn-helix BaLi_c06160 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c06160 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c06220 PF03466 LysR substrate binding domain BaLi_c06220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c06230 PF06821 Serine hydrolase BaLi_c06240 PF01638 HxlR-like helix-turn-helix BaLi_c06270 PF04199 Putative cyclase BaLi_c06280 PF00324 Amino acid permease BaLi_c06330 PF00561 alpha/beta hydrolase fold BaLi_c06360 PF04542 Sigma-70 region 2 BaLi_c06360 PF08281 Sigma-70, region 4 BaLi_c06370 PF11738 Protein of unknown function (DUF3298) BaLi_c06370 PF13739 Deacetylase PdaC BaLi_c06380 PF01757 Acyltransferase family BaLi_c06390 PF00293 NUDIX domain BaLi_c06400 PF07690 Major Facilitator Superfamily BaLi_c06410 PF00465 Iron-containing alcohol dehydrogenase BaLi_c06420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c06420 PF06580 Histidine kinase BaLi_c06430 PF04397 LytTr DNA-binding domain BaLi_c06430 PF00072 Response regulator receiver domain BaLi_c06440 PF00746 LPXTG cell wall anchor motif BaLi_c06440 PF17961 Bacterial Ig domain BaLi_c06440 PF04650 YSIRK type signal peptide BaLi_c06440 PF17210 SdrD B-like domain BaLi_c06440 PF10425 C-terminus of bacterial fibrinogen-binding adhesin BaLi_c06450 PF04203 Sortase domain BaLi_c06470 PF00083 Sugar (and other) transporter BaLi_c06550 PF00586 AIR synthase related protein, N-terminal domain BaLi_c06550 PF02769 AIR synthase related protein, C-terminal domain BaLi_c06560 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BaLi_c06570 PF00814 Glycoprotease family BaLi_c06580 PF00583 Acetyltransferase (GNAT) family BaLi_c06590 PF00814 Glycoprotease family BaLi_c06600 PF00005 ABC transporter BaLi_c06600 PF12848 ABC transporter BaLi_c06600 PF16326 ABC transporter C-terminal domain BaLi_c06610 PF01967 MoaC family BaLi_c06620 PF06971 Putative DNA-binding protein N-terminus BaLi_c06620 PF02629 CoA binding domain BaLi_c06630 PF02416 mttA/Hcf106 family BaLi_c06640 PF00902 Sec-independent protein translocase protein (TatC) BaLi_c06650 PF14146 Domain of unknown function (DUF4305) BaLi_c06660 PF02517 CPBP intramembrane metalloprotease BaLi_c06670 PF00166 Chaperonin 10 Kd subunit BaLi_c06680 PF00118 TCP-1/cpn60 chaperonin family BaLi_c06690 PF00589 Phage integrase family BaLi_c06690 PF02899 Phage integrase, N-terminal SAM-like domain BaLi_c06700 PF00717 Peptidase S24-like BaLi_c06700 PF01726 LexA DNA binding domain BaLi_c07040 PF01464 Transglycosylase SLT domain BaLi_c07110 PF10779 Haemolysin XhlA BaLi_c07120 PF04688 SPP1 phage holin BaLi_c07130 PF01471 Putative peptidoglycan binding domain BaLi_c07130 PF01510 N-acetylmuramoyl-L-alanine amidase BaLi_c07170 PF04294 VanW like protein BaLi_c07180 PF10787 Uncharacterised protein from bacillus cereus group BaLi_c07200 PF02586 SOS response associated peptidase (SRAP) BaLi_c07220 PF17933 Tetracyclin repressor-like, C-terminal domain BaLi_c07220 PF00440 Bacterial regulatory proteins, tetR family BaLi_c07230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BaLi_c07230 PF00391 PEP-utilising enzyme, mobile domain BaLi_c07260 PF00106 short chain dehydrogenase BaLi_c07270 PF00135 Carboxylesterase family BaLi_c07280 PF07690 Major Facilitator Superfamily BaLi_c07290 PF04012 PspA/IM30 family BaLi_c07300 PF08271 TFIIB zinc-binding BaLi_c07310 PF04536 TPM domain BaLi_c07320 PF13421 SPFH domain-Band 7 family BaLi_c07340 PF11495 Archaeal transcriptional regulator TrmB BaLi_c07340 PF01978 Sugar-specific transcriptional regulator TrmB BaLi_c07350 PF01810 LysE type translocator BaLi_c07360 PF06803 Protein of unknown function (DUF1232) BaLi_c07370 PF01098 Cell cycle protein BaLi_c07380 PF01098 Cell cycle protein BaLi_c07440 PF13739 Deacetylase PdaC BaLi_c07440 PF01522 Polysaccharide deacetylase BaLi_c07440 PF11738 Protein of unknown function (DUF3298) BaLi_c07450 PF00128 Alpha amylase, catalytic domain BaLi_c07450 PF09154 Domain of unknown function (DUF1939) BaLi_c07460 PF00356 Bacterial regulatory proteins, lacI family BaLi_c07470 PF00128 Alpha amylase, catalytic domain BaLi_c07470 PF02903 Alpha amylase, N-terminal ig-like domain BaLi_c07480 PF13416 Bacterial extracellular solute-binding protein BaLi_c07490 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c07500 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c07510 PF06691 Protein of unknown function (DUF1189) BaLi_c07520 PF03633 Glycosyl hydrolase family 65, C-terminal domain BaLi_c07520 PF03632 Glycosyl hydrolase family 65 central catalytic domain BaLi_c07520 PF03636 Glycosyl hydrolase family 65, N-terminal domain BaLi_c07530 PF16657 Maltogenic Amylase, C-terminal domain BaLi_c07530 PF00128 Alpha amylase, catalytic domain BaLi_c07540 PF13419 Haloacid dehalogenase-like hydrolase BaLi_c07550 PF01479 S4 domain BaLi_c07550 PF00579 tRNA synthetases class I (W and Y) BaLi_c07560 PF01047 MarR family BaLi_c07590 PF03330 Lytic transglycolase BaLi_c07600 PF07676 WD40-like Beta Propeller Repeat BaLi_c07610 PF13170 Protein of unknown function (DUF4003) BaLi_c07640 PF10502 Signal peptidase, peptidase S26 BaLi_c07660 PF13460 NAD(P)H-binding BaLi_c07670 PF12833 Helix-turn-helix domain BaLi_c07680 PF07732 Multicopper oxidase BaLi_c07680 PF00394 Multicopper oxidase BaLi_c07680 PF07731 Multicopper oxidase BaLi_c07710 PF01545 Cation efflux family BaLi_c07710 PF16916 Dimerisation domain of Zinc Transporter BaLi_c07720 PF07726 ATPase family associated with various cellular activities (AAA) BaLi_c07720 PF17863 AAA lid domain BaLi_c07730 PF01882 Protein of unknown function DUF58 BaLi_c07740 PF13559 Domain of unknown function (DUF4129) BaLi_c07740 PF11992 Domain of unknown function (DUF3488) BaLi_c07740 PF01841 Transglutaminase-like superfamily BaLi_c07750 PF02540 NAD synthase BaLi_c07750 PF00117 Glutamine amidotransferase class-I BaLi_c07750 PF00958 GMP synthase C terminal domain BaLi_c07770 PF00860 Permease family BaLi_c07790 PF13076 Fur-regulated basic protein A BaLi_c07800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c07810 PF14044 NETI protein BaLi_c07820 PF00731 AIR carboxylase BaLi_c07840 PF02222 ATP-grasp domain BaLi_c07840 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BaLi_c07850 PF00206 Lyase BaLi_c07850 PF10397 Adenylosuccinate lyase C-terminus BaLi_c07860 PF01259 SAICAR synthetase BaLi_c07870 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BaLi_c07890 PF00586 AIR synthase related protein, N-terminal domain BaLi_c07890 PF02769 AIR synthase related protein, C-terminal domain BaLi_c07890 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BaLi_c07900 PF00156 Phosphoribosyl transferase domain BaLi_c07910 PF02769 AIR synthase related protein, C-terminal domain BaLi_c07910 PF00586 AIR synthase related protein, N-terminal domain BaLi_c07920 PF00551 Formyl transferase BaLi_c07930 PF01808 AICARFT/IMPCHase bienzyme BaLi_c07930 PF02142 MGS-like domain BaLi_c07940 PF02843 Phosphoribosylglycinamide synthetase, C domain BaLi_c07940 PF02844 Phosphoribosylglycinamide synthetase, N domain BaLi_c07940 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BaLi_c07960 PF00067 Cytochrome P450 BaLi_c07990 PF11127 Protein of unknown function (DUF2892) BaLi_c08000 PF13382 Adenine deaminase C-terminal domain BaLi_c08000 PF01979 Amidohydrolase family BaLi_c08010 PF11258 Protein of unknown function (DUF3048) N-terminal domain BaLi_c08010 PF17479 Protein of unknown function (DUF3048) C-terminal domain BaLi_c08020 PF01371 Trp repressor protein BaLi_c08030 PF01884 PcrB family BaLi_c08040 PF13361 UvrD-like helicase C-terminal domain BaLi_c08040 PF00580 UvrD/REP helicase N-terminal domain BaLi_c08050 PF03120 NAD-dependent DNA ligase OB-fold domain BaLi_c08050 PF00533 BRCA1 C Terminus (BRCT) domain BaLi_c08050 PF01653 NAD-dependent DNA ligase adenylation domain BaLi_c08050 PF12826 Helix-hairpin-helix motif BaLi_c08050 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BaLi_c08060 PF07537 CamS sex pheromone cAM373 precursor BaLi_c08070 PF14502 Helix-turn-helix domain BaLi_c08070 PF14503 YhfZ C-terminal domain BaLi_c08090 PF10941 Protein of unknown function DUF2620 BaLi_c08100 PF10797 Protein of unknown function BaLi_c08110 PF02126 Phosphotriesterase family BaLi_c08120 PF00155 Aminotransferase class I and II BaLi_c08130 PF01676 Metalloenzyme superfamily BaLi_c08140 PF01168 Alanine racemase, N-terminal domain BaLi_c08150 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BaLi_c08160 PF02308 MgtC family BaLi_c08170 PF00474 Sodium:solute symporter family BaLi_c08180 PF02686 Glu-tRNAGln amidotransferase C subunit BaLi_c08190 PF01425 Amidase BaLi_c08200 PF02934 GatB/GatE catalytic domain BaLi_c08200 PF02637 GatB domain BaLi_c08230 PF02156 Glycosyl hydrolase family 26 BaLi_c08240 PF00440 Bacterial regulatory proteins, tetR family BaLi_c08250 PF00873 AcrB/AcrD/AcrF family BaLi_c08270 PF13302 Acetyltransferase (GNAT) domain BaLi_c08280 PF01156 Inosine-uridine preferring nucleoside hydrolase BaLi_c08290 PF00781 Diacylglycerol kinase catalytic domain BaLi_c08300 PF05958 tRNA (Uracil-5-)-methyltransferase BaLi_c08300 PF01938 TRAM domain BaLi_c08350 PF00145 C-5 cytosine-specific DNA methylase BaLi_c08360 PF00232 Glycosyl hydrolase family 1 BaLi_c08370 PF00874 PRD domain BaLi_c08370 PF03123 CAT RNA binding domain BaLi_c08380 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c08400 PF13091 PLD-like domain BaLi_c08400 PF13087 AAA domain BaLi_c08420 PF00892 EamA-like transporter family BaLi_c08430 PF00392 Bacterial regulatory proteins, gntR family BaLi_c08430 PF00155 Aminotransferase class I and II BaLi_c08440 PF00892 EamA-like transporter family BaLi_c08450 PF01709 Transcriptional regulator BaLi_c08460 PF01381 Helix-turn-helix BaLi_c08520 PF00171 Aldehyde dehydrogenase family BaLi_c08530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c08540 PF01040 UbiA prenyltransferase family BaLi_c08550 PF00440 Bacterial regulatory proteins, tetR family BaLi_c08560 PF00939 Sodium:sulfate symporter transmembrane region BaLi_c08570 PF00005 ABC transporter BaLi_c08570 PF16326 ABC transporter C-terminal domain BaLi_c08570 PF12848 ABC transporter BaLi_c08580 PF03466 LysR substrate binding domain BaLi_c08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c08590 PF01965 DJ-1/PfpI family BaLi_c08600 PF02649 Type I GTP cyclohydrolase folE2 BaLi_c08630 PF07683 Cobalamin synthesis protein cobW C-terminal domain BaLi_c08630 PF02492 CobW/HypB/UreG, nucleotide-binding domain BaLi_c08640 PF03744 6-carboxyhexanoate--CoA ligase BaLi_c08650 PF00202 Aminotransferase class-III BaLi_c08660 PF00155 Aminotransferase class I and II BaLi_c08680 PF06968 Biotin and Thiamin Synthesis associated domain BaLi_c08680 PF04055 Radical SAM superfamily BaLi_c08690 PF00067 Cytochrome P450 BaLi_c08710 PF13411 MerR HTH family regulatory protein BaLi_c08720 PF07690 Major Facilitator Superfamily BaLi_c08730 PF00005 ABC transporter BaLi_c08730 PF12848 ABC transporter BaLi_c08740 PF00271 Helicase conserved C-terminal domain BaLi_c08740 PF00270 DEAD/DEAH box helicase BaLi_c08750 PF00107 Zinc-binding dehydrogenase BaLi_c08750 PF16884 N-terminal domain of oxidoreductase BaLi_c08760 PF11486 Protein of unknown function (DUF3212) BaLi_c08770 PF11181 Heat induced stress protein YflT BaLi_c08780 PF00939 Sodium:sulfate symporter transmembrane region BaLi_c08800 PF00005 ABC transporter BaLi_c08840 PF00753 Metallo-beta-lactamase superfamily BaLi_c08860 PF02898 Nitric oxide synthase, oxygenase domain BaLi_c08870 PF00704 Glycosyl hydrolases family 18 BaLi_c08880 PF13630 SdpI/YhfL protein family BaLi_c08880 PF07853 Protein of unknown function (DUF1648) BaLi_c08890 PF01022 Bacterial regulatory protein, arsR family BaLi_c08900 PF00708 Acylphosphatase BaLi_c08910 PF03475 3-alpha domain BaLi_c08910 PF03473 MOSC domain BaLi_c08920 PF11121 Protein of unknown function (DUF2639) BaLi_c08940 PF00557 Metallopeptidase family M24 BaLi_c08950 PF00884 Sulfatase BaLi_c08960 PF09350 Domain of unknown function (DUF1992) BaLi_c08980 PF01235 Sodium:alanine symporter family BaLi_c08990 PF02378 Phosphotransferase system, EIIC BaLi_c08990 PF00367 phosphotransferase system, EIIB BaLi_c09000 PF16657 Maltogenic Amylase, C-terminal domain BaLi_c09000 PF00128 Alpha amylase, catalytic domain BaLi_c09010 PF07702 UTRA domain BaLi_c09010 PF00392 Bacterial regulatory proteins, gntR family BaLi_c09020 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c09060 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BaLi_c09070 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c09080 PF01370 NAD dependent epimerase/dehydratase family BaLi_c09100 PF00535 Glycosyl transferase family 2 BaLi_c09110 PF00535 Glycosyl transferase family 2 BaLi_c09110 PF13181 Tetratricopeptide repeat BaLi_c09120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BaLi_c09130 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c09130 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c09140 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BaLi_c09140 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BaLi_c09140 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BaLi_c09160 PF01638 HxlR-like helix-turn-helix BaLi_c09170 PF00881 Nitroreductase family BaLi_c09180 PF02872 5'-nucleotidase, C-terminal domain BaLi_c09180 PF00149 Calcineurin-like phosphoesterase BaLi_c09190 PF01965 DJ-1/PfpI family BaLi_c09200 PF06569 Protein of unknown function (DUF1128) BaLi_c09210 PF01235 Sodium:alanine symporter family BaLi_c09220 PF01451 Low molecular weight phosphotyrosine protein phosphatase BaLi_c09240 PF03631 Virulence factor BrkB BaLi_c09250 PF07690 Major Facilitator Superfamily BaLi_c09270 PF01699 Sodium/calcium exchanger protein BaLi_c09280 PF14167 YfkD-like protein BaLi_c09290 PF04055 Radical SAM superfamily BaLi_c09290 PF08756 YfkB-like domain BaLi_c09310 PF01522 Polysaccharide deacetylase BaLi_c09320 PF00465 Iron-containing alcohol dehydrogenase BaLi_c09340 PF01544 CorA-like Mg2+ transporter protein BaLi_c09350 PF00730 HhH-GPD superfamily base excision DNA repair protein BaLi_c09360 PF01938 TRAM domain BaLi_c09360 PF05958 tRNA (Uracil-5-)-methyltransferase BaLi_c09420 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BaLi_c09430 PF10925 Protein of unknown function (DUF2680) BaLi_c09440 PF07690 Major Facilitator Superfamily BaLi_c09460 PF00367 phosphotransferase system, EIIB BaLi_c09460 PF02378 Phosphotransferase system, EIIC BaLi_c09470 PF03123 CAT RNA binding domain BaLi_c09470 PF00874 PRD domain BaLi_c09490 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) BaLi_c09500 PF00361 Proton-conducting membrane transporter BaLi_c09500 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BaLi_c09510 PF10057 Uncharacterized conserved protein (DUF2294) BaLi_c09530 PF00676 Dehydrogenase E1 component BaLi_c09540 PF02780 Transketolase, C-terminal domain BaLi_c09540 PF02779 Transketolase, pyrimidine binding domain BaLi_c09550 PF00364 Biotin-requiring enzyme BaLi_c09550 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BaLi_c09550 PF02817 e3 binding domain BaLi_c09560 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BaLi_c09560 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c09570 PF02954 Bacterial regulatory protein, Fis family BaLi_c09570 PF01590 GAF domain BaLi_c09570 PF00158 Sigma-54 interaction domain BaLi_c09580 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BaLi_c09590 PF02056 Family 4 glycosyl hydrolase BaLi_c09590 PF11975 Family 4 glycosyl hydrolase C-terminal domain BaLi_c09600 PF01380 SIS domain BaLi_c09600 PF01418 Helix-turn-helix domain, rpiR family BaLi_c09610 PF02378 Phosphotransferase system, EIIC BaLi_c09610 PF00367 phosphotransferase system, EIIB BaLi_c09640 PF01638 HxlR-like helix-turn-helix BaLi_c09650 PF07681 DoxX BaLi_c09660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c09670 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BaLi_c09670 PF04616 Glycosyl hydrolases family 43 BaLi_c09680 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BaLi_c09680 PF04616 Glycosyl hydrolases family 43 BaLi_c09690 PF12833 Helix-turn-helix domain BaLi_c09700 PF13416 Bacterial extracellular solute-binding protein BaLi_c09710 PF02525 Flavodoxin-like fold BaLi_c09720 PF00293 NUDIX domain BaLi_c09730 PF12867 DinB superfamily BaLi_c09740 PF03706 Lysylphosphatidylglycerol synthase TM region BaLi_c09740 PF09924 Uncharacterised conserved protein (DUF2156) BaLi_c09750 PF02567 Phenazine biosynthesis-like protein BaLi_c09760 PF00881 Nitroreductase family BaLi_c09770 PF14151 YfhD-like protein BaLi_c09790 PF01370 NAD dependent epimerase/dehydratase family BaLi_c09790 PF08338 Domain of unknown function (DUF1731) BaLi_c09800 PF02631 RecX family BaLi_c09810 PF08838 Protein of unknown function (DUF1811) BaLi_c09830 PF08176 Small acid-soluble spore protein K family BaLi_c09840 PF14043 WVELL protein BaLi_c09850 PF00535 Glycosyl transferase family 2 BaLi_c09870 PF09586 Bacterial membrane protein YfhO BaLi_c09880 PF04307 LexA-binding, inner membrane-associated putative hydrolase BaLi_c09890 PF00730 HhH-GPD superfamily base excision DNA repair protein BaLi_c09890 PF14815 NUDIX domain BaLi_c09930 PF14182 YgaB-like protein BaLi_c09940 PF04167 Protein of unknown function (DUF402) BaLi_c09950 PF00005 ABC transporter BaLi_c09950 PF00664 ABC transporter transmembrane region BaLi_c09960 PF00005 ABC transporter BaLi_c09960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c09970 PF00005 ABC transporter BaLi_c09970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c09980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c10020 PF06081 Aromatic acid exporter family member 1 BaLi_c10030 PF00202 Aminotransferase class-III BaLi_c10040 PF00578 AhpC/TSA family BaLi_c10050 PF01475 Ferric uptake regulator family BaLi_c10060 PF11023 Zinc-ribbon containing domain BaLi_c10070 PF18576 Helix-turn-helix domain BaLi_c10070 PF14540 Nucleotidyltransferase-like BaLi_c10270 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c10290 PF18593 CdiI immunity protein BaLi_c10300 PF14449 Pre-toxin TG BaLi_c10300 PF04740 LXG domain of WXG superfamily BaLi_c10310 PF08463 EcoEI R protein C-terminal BaLi_c10310 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) BaLi_c10310 PF00271 Helicase conserved C-terminal domain BaLi_c10310 PF04851 Type III restriction enzyme, res subunit BaLi_c10320 PF12161 HsdM N-terminal domain BaLi_c10320 PF02384 N-6 DNA Methylase BaLi_c10330 PF01420 Type I restriction modification DNA specificity domain BaLi_c10340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BaLi_c10340 PF03129 Anticodon binding domain BaLi_c10340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BaLi_c10340 PF02824 TGS domain BaLi_c10380 PF01487 Type I 3-dehydroquinase BaLi_c10390 PF13667 ThiC-associated domain BaLi_c10390 PF01964 Radical SAM ThiC family BaLi_c10400 PF00005 ABC transporter BaLi_c10410 PF09084 NMT1/THI5 like BaLi_c10420 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c10430 PF00296 Luciferase-like monooxygenase BaLi_c10450 PF01381 Helix-turn-helix BaLi_c10480 PF00005 ABC transporter BaLi_c10480 PF13732 Domain of unknown function (DUF4162) BaLi_c10510 PF00253 Ribosomal protein S14p/S29e BaLi_c10550 PF08331 Domain of unknown function (DUF1730) BaLi_c10560 PF12671 Putative amidase domain BaLi_c10570 PF00588 SpoU rRNA Methylase family BaLi_c10580 PF13171 Protein of unknown function (DUF4004) BaLi_c10590 PF04519 Polymer-forming cytoskeletal BaLi_c10620 PF06798 PrkA serine protein kinase C-terminal domain BaLi_c10620 PF08298 PrkA AAA domain BaLi_c10630 PF04285 Protein of unknown function (DUF444) BaLi_c10650 PF07690 Major Facilitator Superfamily BaLi_c10660 PF03358 NADPH-dependent FMN reductase BaLi_c10690 PF00005 ABC transporter BaLi_c10700 PF00005 ABC transporter BaLi_c10710 PF12679 ABC-2 family transporter protein BaLi_c10720 PF00313 'Cold-shock' DNA-binding domain BaLi_c10730 PF00005 ABC transporter BaLi_c10730 PF09383 NIL domain BaLi_c10740 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c10750 PF03180 NLPA lipoprotein BaLi_c10760 PF00375 Sodium:dicarboxylate symporter family BaLi_c10780 PF00326 Prolyl oligopeptidase family BaLi_c10790 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BaLi_c10810 PF07875 Coat F domain BaLi_c10830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c10830 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c10830 PF00989 PAS fold BaLi_c10830 PF13188 PAS domain BaLi_c10830 PF13426 PAS domain BaLi_c10840 PF00149 Calcineurin-like phosphoesterase BaLi_c10840 PF00565 Staphylococcal nuclease homologue BaLi_c10840 PF02872 5'-nucleotidase, C-terminal domain BaLi_c10840 PF00746 LPXTG cell wall anchor motif BaLi_c10850 PF04203 Sortase domain BaLi_c10860 PF01479 S4 domain BaLi_c10860 PF00849 RNA pseudouridylate synthase BaLi_c10870 PF17326 Family of unknown function (DUF5365) BaLi_c10880 PF00571 CBS domain BaLi_c10890 PF13419 Haloacid dehalogenase-like hydrolase BaLi_c10900 PF00795 Carbon-nitrogen hydrolase BaLi_c10900 PF00583 Acetyltransferase (GNAT) family BaLi_c10920 PF12848 ABC transporter BaLi_c10920 PF16326 ABC transporter C-terminal domain BaLi_c10920 PF00005 ABC transporter BaLi_c10940 PF01226 Formate/nitrite transporter BaLi_c10970 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c10970 PF00107 Zinc-binding dehydrogenase BaLi_c10980 PF04309 Glycerol-3-phosphate responsive antiterminator BaLi_c10990 PF00230 Major intrinsic protein BaLi_c11000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BaLi_c11000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BaLi_c11010 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BaLi_c11010 PF01266 FAD dependent oxidoreductase BaLi_c11020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BaLi_c11020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BaLi_c11020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BaLi_c11020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BaLi_c11050 PF13185 GAF domain BaLi_c11050 PF07730 Histidine kinase BaLi_c11060 PF00072 Response regulator receiver domain BaLi_c11060 PF00196 Bacterial regulatory proteins, luxR family BaLi_c11070 PF03358 NADPH-dependent FMN reductase BaLi_c11080 PF14148 YhdB-like protein BaLi_c11090 PF13028 Protein of unknown function (DUF3889) BaLi_c11100 PF02082 Transcriptional regulator BaLi_c11110 PF00970 Oxidoreductase FAD-binding domain BaLi_c11110 PF00042 Globin BaLi_c11110 PF00175 Oxidoreductase NAD-binding domain BaLi_c11120 PF04293 SpoVR like protein BaLi_c11130 PF00877 NlpC/P60 family BaLi_c11130 PF01476 LysM domain BaLi_c11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c11140 PF03466 LysR substrate binding domain BaLi_c11150 PF00285 Citrate synthase, C-terminal domain BaLi_c11160 PF07995 Glucose / Sorbosone dehydrogenase BaLi_c11180 PF00209 Sodium:neurotransmitter symporter family BaLi_c11250 PF06445 GyrI-like small molecule binding domain BaLi_c11250 PF12833 Helix-turn-helix domain BaLi_c11260 PF00155 Aminotransferase class I and II BaLi_c11260 PF00392 Bacterial regulatory proteins, gntR family BaLi_c11280 PF17453 Sigma-M inhibitor BaLi_c11290 PF13800 Sigma factor regulator N-terminal BaLi_c11290 PF13791 Sigma factor regulator C-terminal BaLi_c11300 PF04542 Sigma-70 region 2 BaLi_c11300 PF08281 Sigma-70, region 4 BaLi_c11310 PF07883 Cupin domain BaLi_c11320 PF00248 Aldo/keto reductase family BaLi_c11330 PF01553 Acyltransferase BaLi_c11340 PF05656 Protein of unknown function (DUF805) BaLi_c11360 PF00440 Bacterial regulatory proteins, tetR family BaLi_c11360 PF18665 Tetracyclin repressor-like, C-terminal domain BaLi_c11370 PF03471 Transporter associated domain BaLi_c11370 PF01595 Cyclin M transmembrane N-terminal domain BaLi_c11370 PF00571 CBS domain BaLi_c11380 PF13411 MerR HTH family regulatory protein BaLi_c11400 PF01595 Cyclin M transmembrane N-terminal domain BaLi_c11400 PF00571 CBS domain BaLi_c11400 PF03471 Transporter associated domain BaLi_c11430 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c11430 PF05036 Sporulation related domain BaLi_c11440 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BaLi_c11450 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BaLi_c11460 PF03009 Glycerophosphoryl diester phosphodiesterase family BaLi_c11470 PF17444 Uncharacterized YhdX-like BaLi_c11480 PF00924 Mechanosensitive ion channel BaLi_c11490 PF02146 Sir2 family BaLi_c11510 PF01522 Polysaccharide deacetylase BaLi_c11520 PF01063 Amino-transferase class IV BaLi_c11530 PF03553 Na+/H+ antiporter family BaLi_c11540 PF01263 Aldose 1-epimerase BaLi_c11610 PF00582 Universal stress protein family BaLi_c11640 PF00005 ABC transporter BaLi_c11640 PF00664 ABC transporter transmembrane region BaLi_c11650 PF00005 ABC transporter BaLi_c11650 PF00664 ABC transporter transmembrane region BaLi_c11660 PF13460 NAD(P)H-binding BaLi_c11680 PF00269 Small, acid-soluble spore proteins, alpha/beta type BaLi_c11700 PF00005 ABC transporter BaLi_c11700 PF03459 TOBE domain BaLi_c11700 PF17912 MalK OB fold domain BaLi_c11710 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c11720 PF17277 Family of unknown function (DUF5342) BaLi_c11730 PF14398 YheC/D like ATP-grasp BaLi_c11740 PF14398 YheC/D like ATP-grasp BaLi_c11750 PF04286 Protein of unknown function (DUF445) BaLi_c11760 PF06133 Control of competence regulator ComK, YlbF/YmcA BaLi_c11800 PF04055 Radical SAM superfamily BaLi_c11810 PF00999 Sodium/hydrogen exchanger family BaLi_c11820 PF02080 TrkA-C domain BaLi_c11840 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c11850 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c11880 PF13732 Domain of unknown function (DUF4162) BaLi_c11880 PF00005 ABC transporter BaLi_c11900 PF00149 Calcineurin-like phosphoesterase BaLi_c11910 PF13514 AAA domain BaLi_c11920 PF01966 HD domain BaLi_c11930 PF14147 Sporulation protein YhaL BaLi_c11950 PF09680 Family of unknown function BaLi_c11980 PF11667 Putative zincin peptidase BaLi_c11990 PF08963 Protein of unknown function (DUF1878) BaLi_c12000 PF01047 MarR family BaLi_c12010 PF12732 YtxH-like protein BaLi_c12030 PF17099 Tryptophan transporter TrpP BaLi_c12040 PF00266 Aminotransferase class-V BaLi_c12050 PF01230 HIT domain BaLi_c12060 PF00005 ABC transporter BaLi_c12070 PF05975 Bacterial ABC transporter protein EcsB BaLi_c12080 PF12787 EcsC protein family BaLi_c12090 PF01546 Peptidase family M20/M25/M40 BaLi_c12090 PF07687 Peptidase dimerisation domain BaLi_c12110 PF03992 Antibiotic biosynthesis monooxygenase BaLi_c12120 PF00905 Penicillin binding protein transpeptidase domain BaLi_c12120 PF00912 Transglycosylase BaLi_c12130 PF01208 Uroporphyrinogen decarboxylase (URO-D) BaLi_c12160 PF00440 Bacterial regulatory proteins, tetR family BaLi_c12160 PF17932 Tetracyclin repressor-like, C-terminal domain BaLi_c12180 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BaLi_c12180 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BaLi_c12190 PF05343 M42 glutamyl aminopeptidase BaLi_c12210 PF00375 Sodium:dicarboxylate symporter family BaLi_c12220 PF14149 YhfH-like protein BaLi_c12230 PF12706 Beta-lactamase superfamily domain BaLi_c12240 PF03099 Biotin/lipoate A/B protein ligase family BaLi_c12240 PF10437 Bacterial lipoate protein ligase C-terminus BaLi_c12250 PF00501 AMP-binding enzyme BaLi_c12250 PF13193 AMP-binding enzyme C-terminal domain BaLi_c12270 PF07883 Cupin domain BaLi_c12270 PF01381 Helix-turn-helix BaLi_c12300 PF01435 Peptidase family M48 BaLi_c12300 PF16491 CAAX prenyl protease N-terminal, five membrane helices BaLi_c12320 PF00892 EamA-like transporter family BaLi_c12330 PF01497 Periplasmic binding protein BaLi_c12340 PF01032 FecCD transport family BaLi_c12350 PF01032 FecCD transport family BaLi_c12360 PF00300 Histidine phosphatase superfamily (branch 1) BaLi_c12370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c12380 PF01266 FAD dependent oxidoreductase BaLi_c12380 PF00355 Rieske [2Fe-2S] domain BaLi_c12400 PF08858 IDEAL domain BaLi_c12410 PF06338 ComK protein BaLi_c12430 PF09335 SNARE associated Golgi protein BaLi_c12440 PF10502 Signal peptidase, peptidase S26 BaLi_c12450 PF00082 Subtilase family BaLi_c12470 PF07905 Purine catabolism regulatory protein-like family BaLi_c12470 PF17853 GGDEF-like domain BaLi_c12470 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c12490 PF01979 Amidohydrolase family BaLi_c12520 PF01546 Peptidase family M20/M25/M40 BaLi_c12530 PF07883 Cupin domain BaLi_c12530 PF05899 Protein of unknown function (DUF861) BaLi_c12540 PF02615 Malate/L-lactate dehydrogenase BaLi_c12550 PF02615 Malate/L-lactate dehydrogenase BaLi_c12560 PF00549 CoA-ligase BaLi_c12560 PF02629 CoA binding domain BaLi_c12570 PF06545 Protein of unknown function (DUF1116) BaLi_c12580 PF11392 Protein of unknown function (DUF2877) BaLi_c12590 PF00696 Amino acid kinase family BaLi_c12600 PF07690 Major Facilitator Superfamily BaLi_c12610 PF10901 Protein of unknown function (DUF2690) BaLi_c12620 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c12680 PF11975 Family 4 glycosyl hydrolase C-terminal domain BaLi_c12680 PF02056 Family 4 glycosyl hydrolase BaLi_c12690 PF05145 Transition state regulatory protein AbrB BaLi_c12700 PF11007 Spore coat associated protein JA (CotJA) BaLi_c12710 PF12652 CotJB protein BaLi_c12720 PF05067 Manganese containing catalase BaLi_c12730 PF13193 AMP-binding enzyme C-terminal domain BaLi_c12730 PF00501 AMP-binding enzyme BaLi_c12740 PF07690 Major Facilitator Superfamily BaLi_c12750 PF12793 Sugar transport-related sRNA regulator N-term BaLi_c12750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c12770 PF16736 Single Cache-like BaLi_c12770 PF00989 PAS fold BaLi_c12770 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c12770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c12780 PF00072 Response regulator receiver domain BaLi_c12780 PF00486 Transcriptional regulatory protein, C terminal BaLi_c12800 PF02915 Rubrerythrin BaLi_c12820 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c12830 PF12705 PD-(D/E)XK nuclease superfamily BaLi_c12840 PF13361 UvrD-like helicase C-terminal domain BaLi_c12840 PF12705 PD-(D/E)XK nuclease superfamily BaLi_c12840 PF00580 UvrD/REP helicase N-terminal domain BaLi_c12850 PF00149 Calcineurin-like phosphoesterase BaLi_c12850 PF12320 Type 5 capsule protein repressor C-terminal domain BaLi_c12860 PF13476 AAA domain BaLi_c12870 PF10676 Spore germination protein gerPA/gerPF BaLi_c12880 PF10970 Spore germination protein GerPE BaLi_c12890 PF10737 Spore germination protein GerPC BaLi_c12900 PF10803 Spore germination GerPB BaLi_c12910 PF10676 Spore germination protein gerPA/gerPF BaLi_c12920 PF12650 Domain of unknown function (DUF3784) BaLi_c12930 PF09388 Spo0E like sporulation regulatory protein BaLi_c12940 PF08757 CotH kinase protein BaLi_c12960 PF01557 Fumarylacetoacetate (FAA) hydrolase family BaLi_c12990 PF03193 RsgA GTPase BaLi_c13000 PF07457 Protein of unknown function (DUF1516) BaLi_c13010 PF10949 Protein of unknown function (DUF2777) BaLi_c13020 PF00733 Asparagine synthase BaLi_c13020 PF13537 Glutamine amidotransferase domain BaLi_c13030 PF00909 Ammonium Transporter Family BaLi_c13040 PF00543 Nitrogen regulatory protein P-II BaLi_c13050 PF01554 MatE BaLi_c13060 PF12833 Helix-turn-helix domain BaLi_c13060 PF02311 AraC-like ligand binding domain BaLi_c13080 PF00356 Bacterial regulatory proteins, lacI family BaLi_c13090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c13090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c13100 PF05504 Spore germination B3/ GerAC like, C-terminal BaLi_c13120 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c13130 PF01810 LysE type translocator BaLi_c13140 PF00392 Bacterial regulatory proteins, gntR family BaLi_c13140 PF00155 Aminotransferase class I and II BaLi_c13150 PF00202 Aminotransferase class-III BaLi_c13160 PF00282 Pyridoxal-dependent decarboxylase conserved domain BaLi_c13170 PF06276 Ferric iron reductase FhuF-like transporter BaLi_c13170 PF04183 IucA / IucC family BaLi_c13190 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BaLi_c13200 PF06276 Ferric iron reductase FhuF-like transporter BaLi_c13200 PF04183 IucA / IucC family BaLi_c13210 PF13673 Acetyltransferase (GNAT) domain BaLi_c13230 PF13280 WYL domain BaLi_c13230 PF08279 HTH domain BaLi_c13240 PF02310 B12 binding domain BaLi_c13240 PF02607 B12 binding domain BaLi_c13240 PF02965 Vitamin B12 dependent methionine synthase, activation domain BaLi_c13240 PF02574 Homocysteine S-methyltransferase BaLi_c13240 PF00809 Pterin binding enzyme BaLi_c13250 PF02574 Homocysteine S-methyltransferase BaLi_c13250 PF02219 Methylenetetrahydrofolate reductase BaLi_c13260 PF04461 Protein of unknown function (DUF520) BaLi_c13270 PF13509 S1 domain BaLi_c13270 PF17783 CvfB-like winged helix domain BaLi_c13300 PF02645 Uncharacterised protein, DegV family COG1307 BaLi_c13310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c13310 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c13320 PF12690 Intracellular proteinase inhibitor BaLi_c13330 PF00478 IMP dehydrogenase / GMP reductase domain BaLi_c13340 PF12758 Protein of unknown function (DUF3813) BaLi_c13360 PF00326 Prolyl oligopeptidase family BaLi_c13370 PF01883 Iron-sulfur cluster assembly protein BaLi_c13380 PF01118 Semialdehyde dehydrogenase, NAD binding domain BaLi_c13380 PF02774 Semialdehyde dehydrogenase, dimerisation domain BaLi_c13390 PF01960 ArgJ family BaLi_c13400 PF00696 Amino acid kinase family BaLi_c13410 PF00202 Aminotransferase class-III BaLi_c13420 PF00117 Glutamine amidotransferase class-I BaLi_c13420 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BaLi_c13430 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BaLi_c13430 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BaLi_c13440 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BaLi_c13440 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BaLi_c13450 PF02673 Bacitracin resistance protein BacA BaLi_c13460 PF14168 YjzC-like protein BaLi_c13500 PF02608 ABC transporter substrate-binding protein PnrA-like BaLi_c13510 PF10815 ComZ BaLi_c13530 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BaLi_c13530 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BaLi_c13540 PF02801 Beta-ketoacyl synthase, C-terminal domain BaLi_c13540 PF00109 Beta-ketoacyl synthase, N-terminal domain BaLi_c13550 PF10026 Predicted Zn-dependent protease (DUF2268) BaLi_c13560 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c13560 PF00005 ABC transporter BaLi_c13570 PF00005 ABC transporter BaLi_c13570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c13580 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c13590 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c13600 PF12911 N-terminal TM domain of oligopeptide transport permease C BaLi_c13600 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c13620 PF12227 Protein of unknown function (DUF3603) BaLi_c13630 PF00579 tRNA synthetases class I (W and Y) BaLi_c13650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c13660 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c13670 PF12911 N-terminal TM domain of oligopeptide transport permease C BaLi_c13670 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c13680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c13680 PF00005 ABC transporter BaLi_c13690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c13690 PF00005 ABC transporter BaLi_c13700 PF13508 Acetyltransferase (GNAT) domain BaLi_c13710 PF03960 ArsC family BaLi_c13720 PF03741 Integral membrane protein TerC family BaLi_c13730 PF05389 Negative regulator of genetic competence (MecA) BaLi_c13740 PF01270 Glycosyl hydrolases family 8 BaLi_c13770 PF01970 Tripartite tricarboxylate transporter TctA family BaLi_c13780 PF12431 Transcriptional regulator BaLi_c13780 PF00072 Response regulator receiver domain BaLi_c13790 PF17203 Single cache domain 3 BaLi_c13790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c13790 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BaLi_c13790 PF00989 PAS fold BaLi_c13800 PF06054 Competence protein CoiA-like family BaLi_c13810 PF01432 Peptidase family M3 BaLi_c13810 PF08439 Oligopeptidase F BaLi_c13840 PF01152 Bacterial-like globin BaLi_c13860 PF01464 Transglycosylase SLT domain BaLi_c13870 PF01928 CYTH domain BaLi_c13890 PF04607 Region found in RelA / SpoT proteins BaLi_c13900 PF01513 ATP-NAD kinase BaLi_c13910 PF00849 RNA pseudouridylate synthase BaLi_c13920 PF00149 Calcineurin-like phosphoesterase BaLi_c13930 PF02080 TrkA-C domain BaLi_c13930 PF00999 Sodium/hydrogen exchanger family BaLi_c13930 PF02254 TrkA-N domain BaLi_c13940 PF03070 TENA/THI-4/PQQC family BaLi_c13950 PF02581 Thiamine monophosphate synthase BaLi_c13960 PF01266 FAD dependent oxidoreductase BaLi_c13970 PF02597 ThiS family BaLi_c13980 PF05690 Thiazole biosynthesis protein ThiG BaLi_c13990 PF00899 ThiF family BaLi_c14000 PF08543 Phosphomethylpyrimidine kinase BaLi_c14020 PF14153 Spore coat protein CotO BaLi_c14030 PF10612 Spore coat protein Z BaLi_c14040 PF10612 Spore coat protein Z BaLi_c14050 PF07552 Spore Coat Protein X and V domain BaLi_c14070 PF07552 Spore Coat Protein X and V domain BaLi_c14080 PF07098 Protein of unknown function (DUF1360) BaLi_c14120 PF14069 Stage VI sporulation protein F BaLi_c14130 PF00580 UvrD/REP helicase N-terminal domain BaLi_c14130 PF13361 UvrD-like helicase C-terminal domain BaLi_c14150 PF09335 SNARE associated Golgi protein BaLi_c14160 PF16363 GDP-mannose 4,6 dehydratase BaLi_c14170 PF00483 Nucleotidyl transferase BaLi_c14180 PF04138 GtrA-like protein BaLi_c14190 PF13673 Acetyltransferase (GNAT) domain BaLi_c14210 PF00756 Putative esterase BaLi_c14250 PF01053 Cys/Met metabolism PLP-dependent enzyme BaLi_c14260 PF01053 Cys/Met metabolism PLP-dependent enzyme BaLi_c14270 PF05684 Protein of unknown function (DUF819) BaLi_c14300 PF11954 Domain of unknown function (DUF3471) BaLi_c14300 PF00144 Beta-lactamase BaLi_c14320 PF04616 Glycosyl hydrolases family 43 BaLi_c14370 PF10779 Haemolysin XhlA BaLi_c14380 PF04688 SPP1 phage holin BaLi_c14390 PF01510 N-acetylmuramoyl-L-alanine amidase BaLi_c14390 PF01471 Putative peptidoglycan binding domain BaLi_c14410 PF08863 YolD-like protein BaLi_c14440 PF12464 Maltose acetyltransferase BaLi_c14440 PF14602 Hexapeptide repeat of succinyl-transferase BaLi_c14460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c14460 PF03466 LysR substrate binding domain BaLi_c14470 PF00175 Oxidoreductase NAD-binding domain BaLi_c14470 PF00258 Flavodoxin BaLi_c14470 PF00667 FAD binding domain BaLi_c14480 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BaLi_c14480 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BaLi_c14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c14490 PF03466 LysR substrate binding domain BaLi_c14500 PF00892 EamA-like transporter family BaLi_c14510 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c14520 PF16800 IseA DL-endopeptidase inhibitor BaLi_c14530 PF01476 LysM domain BaLi_c14530 PF06725 3D domain BaLi_c14540 PF07690 Major Facilitator Superfamily BaLi_c14550 PF00440 Bacterial regulatory proteins, tetR family BaLi_c14580 PF05908 Poly-gamma-glutamate hydrolase BaLi_c14590 PF06114 IrrE N-terminal-like domain BaLi_c14600 PF01381 Helix-turn-helix BaLi_c14640 PF01695 IstB-like ATP binding protein BaLi_c14660 PF17356 Phage-like element PBSX protein XtrA BaLi_c14670 PF08281 Sigma-70, region 4 BaLi_c14680 PF10668 Phage terminase small subunit BaLi_c14680 PF03592 Terminase small subunit BaLi_c14690 PF04466 Phage terminase large subunit BaLi_c14690 PF17288 Terminase RNAseH like domain BaLi_c14700 PF04860 Phage portal protein BaLi_c14710 PF14550 Putative phage serine protease XkdF BaLi_c14720 PF05065 Phage capsid family BaLi_c14730 PF11436 Protein of unknown function (DUF3199) BaLi_c14740 PF12206 Domain of unknown function (DUF3599) BaLi_c14750 PF04883 Bacteriophage HK97-gp10, putative tail-component BaLi_c14780 PF17481 Phage tail sheath protein beta-sandwich domain BaLi_c14780 PF17482 Phage tail sheath C-terminal domain BaLi_c14780 PF04984 Phage tail sheath protein subtilisin-like domain BaLi_c14790 PF09393 Phage tail tube protein BaLi_c14800 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC BaLi_c14820 PF01464 Transglycosylase SLT domain BaLi_c14830 PF01476 LysM domain BaLi_c14850 PF10844 Protein of unknown function (DUF2577) BaLi_c14860 PF10934 Protein of unknown function (DUF2634) BaLi_c14870 PF04865 Baseplate J-like protein BaLi_c14880 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) BaLi_c14910 PF10779 Haemolysin XhlA BaLi_c14920 PF04688 SPP1 phage holin BaLi_c14930 PF01757 Acyltransferase family BaLi_c14940 PF01471 Putative peptidoglycan binding domain BaLi_c14940 PF01510 N-acetylmuramoyl-L-alanine amidase BaLi_c14950 PF00392 Bacterial regulatory proteins, gntR family BaLi_c14950 PF07729 FCD domain BaLi_c14960 PF00107 Zinc-binding dehydrogenase BaLi_c14960 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c14970 PF03786 D-mannonate dehydratase (UxuA) BaLi_c14980 PF00106 short chain dehydrogenase BaLi_c14990 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c14990 PF00107 Zinc-binding dehydrogenase BaLi_c15000 PF07690 Major Facilitator Superfamily BaLi_c15010 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system BaLi_c15020 PF14171 Toxin SpoIISA, type II toxin-antitoxin system BaLi_c15030 PF01384 Phosphate transporter family BaLi_c15040 PF01865 Protein of unknown function DUF47 BaLi_c15070 PF04854 Protein of unknown function, DUF624 BaLi_c15080 PF00672 HAMP domain BaLi_c15080 PF06580 Histidine kinase BaLi_c15080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c15080 PF02743 Cache domain BaLi_c15090 PF12833 Helix-turn-helix domain BaLi_c15090 PF00072 Response regulator receiver domain BaLi_c15100 PF13416 Bacterial extracellular solute-binding protein BaLi_c15110 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15120 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15130 PF07470 Glycosyl Hydrolase Family 88 BaLi_c15140 PF12833 Helix-turn-helix domain BaLi_c15150 PF13472 GDSL-like Lipase/Acylhydrolase family BaLi_c15160 PF09224 Domain of unknown function (DUF1961) BaLi_c15170 PF04854 Protein of unknown function, DUF624 BaLi_c15180 PF18370 Rhamnogalacturonan I lyases beta-sheet domain BaLi_c15190 PF13472 GDSL-like Lipase/Acylhydrolase family BaLi_c15200 PF01839 FG-GAP repeat BaLi_c15200 PF18370 Rhamnogalacturonan I lyases beta-sheet domain BaLi_c15210 PF00248 Aldo/keto reductase family BaLi_c15220 PF00657 GDSL-like Lipase/Acylhydrolase BaLi_c15230 PF08532 Beta-galactosidase trimerisation domain BaLi_c15230 PF02449 Beta-galactosidase BaLi_c15230 PF08533 Beta-galactosidase C-terminal domain BaLi_c15250 PF01547 Bacterial extracellular solute-binding protein BaLi_c15260 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15270 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15280 PF13520 Amino acid permease BaLi_c15290 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c15300 PF13180 PDZ domain BaLi_c15310 PF03807 NADP oxidoreductase coenzyme F420-dependent BaLi_c15310 PF14748 Pyrroline-5-carboxylate reductase dimerisation BaLi_c15330 PF04951 D-aminopeptidase BaLi_c15340 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15350 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c15350 PF12911 N-terminal TM domain of oligopeptide transport permease C BaLi_c15360 PF00005 ABC transporter BaLi_c15360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c15370 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c15380 PF02016 LD-carboxypeptidase N-terminal domain BaLi_c15380 PF17676 LD-carboxypeptidase C-terminal domain BaLi_c15390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BaLi_c15390 PF13378 Enolase C-terminal domain-like BaLi_c15400 PF00877 NlpC/P60 family BaLi_c15410 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c15410 PF00005 ABC transporter BaLi_c15440 PF04239 Protein of unknown function (DUF421) BaLi_c15450 PF00544 Pectate lyase BaLi_c15490 PF12867 DinB superfamily BaLi_c15500 PF00893 Small Multidrug Resistance protein BaLi_c15510 PF00893 Small Multidrug Resistance protein BaLi_c15520 PF01842 ACT domain BaLi_c15520 PF00551 Formyl transferase BaLi_c15540 PF01472 PUA domain BaLi_c15540 PF00696 Amino acid kinase family BaLi_c15550 PF00171 Aldehyde dehydrogenase family BaLi_c15560 PF02566 OsmC-like protein BaLi_c15570 PF01047 MarR family BaLi_c15580 PF02566 OsmC-like protein BaLi_c15600 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BaLi_c15610 PF00300 Histidine phosphatase superfamily (branch 1) BaLi_c15640 PF08267 Cobalamin-independent synthase, N-terminal domain BaLi_c15640 PF01717 Cobalamin-independent synthase, Catalytic domain BaLi_c15650 PF00082 Subtilase family BaLi_c15660 PF11132 Transcriptional regulator protein (SplA) BaLi_c15670 PF03448 MgtE intracellular N domain BaLi_c15670 PF01769 Divalent cation transporter BaLi_c15670 PF00571 CBS domain BaLi_c15690 PF13411 MerR HTH family regulatory protein BaLi_c15720 PF01047 MarR family BaLi_c15730 PF01068 ATP dependent DNA ligase domain BaLi_c15740 PF02735 Ku70/Ku80 beta-barrel domain BaLi_c15750 PF03707 Bacterial signalling protein N terminal repeat BaLi_c15750 PF00990 Diguanylate cyclase, GGDEF domain BaLi_c15750 PF00563 EAL domain BaLi_c15760 PF09335 SNARE associated Golgi protein BaLi_c15770 PF03741 Integral membrane protein TerC family BaLi_c15780 PF04542 Sigma-70 region 2 BaLi_c15790 PF12791 Anti-sigma factor N-terminus BaLi_c15800 PF00269 Small, acid-soluble spore proteins, alpha/beta type BaLi_c15810 PF08876 Domain of unknown function (DUF1836) BaLi_c15820 PF01435 Peptidase family M48 BaLi_c15830 PF02386 Cation transport protein BaLi_c15840 PF03717 Penicillin-binding Protein dimerisation domain BaLi_c15840 PF05223 NTF2-like N-terminal transpeptidase domain BaLi_c15840 PF00905 Penicillin binding protein transpeptidase domain BaLi_c15870 PF01757 Acyltransferase family BaLi_c15880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c15880 PF00989 PAS fold BaLi_c15880 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c15880 PF13426 PAS domain BaLi_c15880 PF13188 PAS domain BaLi_c15890 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BaLi_c15890 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BaLi_c15900 PF01008 Initiation factor 2 subunit family BaLi_c15910 PF01636 Phosphotransferase enzyme family BaLi_c15920 PF00795 Carbon-nitrogen hydrolase BaLi_c15930 PF00155 Aminotransferase class I and II BaLi_c15940 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BaLi_c15940 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BaLi_c15950 PF00596 Class II Aldolase and Adducin N-terminal domain BaLi_c15960 PF00596 Class II Aldolase and Adducin N-terminal domain BaLi_c15970 PF03079 ARD/ARD' family BaLi_c15980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c15990 PF06803 Protein of unknown function (DUF1232) BaLi_c16010 PF02743 Cache domain BaLi_c16010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c16010 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c16020 PF01047 MarR family BaLi_c16030 PF13677 Membrane MotB of proton-channel complex MotA/MotB BaLi_c16030 PF00691 OmpA family BaLi_c16040 PF01618 MotA/TolQ/ExbB proton channel family BaLi_c16050 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c16050 PF17871 AAA lid domain BaLi_c16050 PF07724 AAA domain (Cdc48 subfamily) BaLi_c16050 PF10431 C-terminal, D2-small domain, of ClpB protein BaLi_c16070 PF06508 Queuosine biosynthesis protein QueC BaLi_c16080 PF01242 6-pyruvoyl tetrahydropterin synthase BaLi_c16090 PF04055 Radical SAM superfamily BaLi_c16100 PF14489 QueF-like protein BaLi_c16130 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c16130 PF13176 Tetratricopeptide repeat BaLi_c16160 PF05675 Protein of unknown function (DUF817) BaLi_c16170 PF13443 Cro/C1-type HTH DNA-binding domain BaLi_c16180 PF11188 Protein of unknown function (DUF2975) BaLi_c16240 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BaLi_c16260 PF07486 Cell Wall Hydrolase BaLi_c16270 PF01943 Polysaccharide biosynthesis protein BaLi_c16280 PF00578 AhpC/TSA family BaLi_c16300 PF01321 Creatinase/Prolidase N-terminal domain BaLi_c16300 PF00557 Metallopeptidase family M24 BaLi_c16330 PF00356 Bacterial regulatory proteins, lacI family BaLi_c16330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BaLi_c16340 PF03123 CAT RNA binding domain BaLi_c16340 PF00874 PRD domain BaLi_c16350 PF00367 phosphotransferase system, EIIB BaLi_c16350 PF02378 Phosphotransferase system, EIIC BaLi_c16350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BaLi_c16360 PF00381 PTS HPr component phosphorylation site BaLi_c16370 PF05524 PEP-utilising enzyme, N-terminal BaLi_c16370 PF00391 PEP-utilising enzyme, mobile domain BaLi_c16370 PF02896 PEP-utilising enzyme, TIM barrel domain BaLi_c16390 PF00583 Acetyltransferase (GNAT) family BaLi_c16400 PF02743 Cache domain BaLi_c16400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c16400 PF00672 HAMP domain BaLi_c16420 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BaLi_c16420 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BaLi_c16430 PF00188 Cysteine-rich secretory protein family BaLi_c16440 PF03717 Penicillin-binding Protein dimerisation domain BaLi_c16440 PF00905 Penicillin binding protein transpeptidase domain BaLi_c16450 PF00989 PAS fold BaLi_c16450 PF08447 PAS fold BaLi_c16450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c16450 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c16460 PF00155 Aminotransferase class I and II BaLi_c16480 PF06271 RDD family BaLi_c16500 PF01584 CheW-like domain BaLi_c16500 PF00072 Response regulator receiver domain BaLi_c16510 PF14177 YkyB-like protein BaLi_c16520 PF07690 Major Facilitator Superfamily BaLi_c16530 PF03734 L,D-transpeptidase catalytic domain BaLi_c16530 PF01476 LysM domain BaLi_c16540 PF10518 TAT (twin-arginine translocation) pathway signal sequence BaLi_c16540 PF00149 Calcineurin-like phosphoesterase BaLi_c16560 PF00563 EAL domain BaLi_c16560 PF10388 EAL-domain associated signalling protein domain BaLi_c16580 PF08796 Protein of unknown function (DUF1797) BaLi_c16600 PF04308 Ribonuclease H-like BaLi_c16610 PF14156 Antirepressor AbbA BaLi_c16630 PF03466 LysR substrate binding domain BaLi_c16630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c16640 PF00258 Flavodoxin BaLi_c16660 PF00258 Flavodoxin BaLi_c16670 PF14602 Hexapeptide repeat of succinyl-transferase BaLi_c16670 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c16670 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BaLi_c16680 PF07687 Peptidase dimerisation domain BaLi_c16680 PF01546 Peptidase family M20/M25/M40 BaLi_c16690 PF03698 Uncharacterised protein family (UPF0180) BaLi_c16700 PF10417 C-terminal domain of 1-Cys peroxiredoxin BaLi_c16700 PF00578 AhpC/TSA family BaLi_c16710 PF00578 AhpC/TSA family BaLi_c16740 PF12804 MobA-like NTP transferase domain BaLi_c16750 PF00899 ThiF family BaLi_c16760 PF00994 Probable molybdopterin binding domain BaLi_c16760 PF03453 MoeA N-terminal region (domain I and II) BaLi_c16760 PF03454 MoeA C-terminal region (domain IV) BaLi_c16770 PF03205 Molybdopterin guanine dinucleotide synthesis protein B BaLi_c16780 PF02391 MoaE protein BaLi_c16790 PF02597 ThiS family BaLi_c16810 PF00664 ABC transporter transmembrane region BaLi_c16810 PF00005 ABC transporter BaLi_c16820 PF00005 ABC transporter BaLi_c16820 PF00664 ABC transporter transmembrane region BaLi_c16830 PF04893 Yip1 domain BaLi_c16840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BaLi_c16850 PF00005 ABC transporter BaLi_c16860 PF12704 MacB-like periplasmic core domain BaLi_c16860 PF02687 FtsX-like permease family BaLi_c16870 PF04893 Yip1 domain BaLi_c16880 PF00455 DeoR C terminal sensor domain BaLi_c16880 PF08220 DeoR-like helix-turn-helix domain BaLi_c16890 PF00294 pfkB family carbohydrate kinase BaLi_c16900 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c16900 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c16910 PF10502 Signal peptidase, peptidase S26 BaLi_c16940 PF00005 ABC transporter BaLi_c16940 PF12848 ABC transporter BaLi_c16960 PF02073 Thermophilic metalloprotease (M29) BaLi_c16970 PF17447 Uncharacterized YkpC-like BaLi_c16990 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BaLi_c16990 PF18277 AbrB C-terminal domain BaLi_c17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c17000 PF00989 PAS fold BaLi_c17000 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c17010 PF02254 TrkA-N domain BaLi_c17010 PF02080 TrkA-C domain BaLi_c17020 PF01979 Amidohydrolase family BaLi_c17020 PF13382 Adenine deaminase C-terminal domain BaLi_c17030 PF17770 Ribonuclease J C-terminal domain BaLi_c17030 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BaLi_c17030 PF00753 Metallo-beta-lactamase superfamily BaLi_c17060 PF01327 Polypeptide deformylase BaLi_c17080 PF10368 Putative cell-wall binding lipoprotein BaLi_c17090 PF00676 Dehydrogenase E1 component BaLi_c17100 PF02780 Transketolase, C-terminal domain BaLi_c17100 PF02779 Transketolase, pyrimidine binding domain BaLi_c17110 PF02817 e3 binding domain BaLi_c17110 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BaLi_c17110 PF00364 Biotin-requiring enzyme BaLi_c17120 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BaLi_c17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c17140 PF13790 SR1 protein BaLi_c17150 PF01276 Orn/Lys/Arg decarboxylase, major domain BaLi_c17150 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BaLi_c17160 PF05256 Uncharacterised protein family (UPF0223) BaLi_c17170 PF06335 Protein of unknown function (DUF1054) BaLi_c17190 PF00459 Inositol monophosphatase family BaLi_c17200 PF00583 Acetyltransferase (GNAT) family BaLi_c17230 PF08281 Sigma-70, region 4 BaLi_c17230 PF04542 Sigma-70 region 2 BaLi_c17240 PF13490 Putative zinc-finger BaLi_c17280 PF14036 YlaH-like protein BaLi_c17290 PF01047 MarR family BaLi_c17300 PF01494 FAD binding domain BaLi_c17310 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BaLi_c17320 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BaLi_c17330 PF13638 PIN domain BaLi_c17330 PF02562 PhoH-like protein BaLi_c17350 PF04960 Glutaminase BaLi_c17360 PF07408 Protein of unknown function (DUF1507) BaLi_c17370 PF01098 Cell cycle protein BaLi_c17380 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BaLi_c17380 PF00682 HMGL-like BaLi_c17380 PF02785 Biotin carboxylase C-terminal domain BaLi_c17380 PF00289 Biotin carboxylase, N-terminal domain BaLi_c17380 PF00364 Biotin-requiring enzyme BaLi_c17380 PF02436 Conserved carboxylase domain BaLi_c17390 PF02628 Cytochrome oxidase assembly protein BaLi_c17400 PF01040 UbiA prenyltransferase family BaLi_c17410 PF00034 Cytochrome c BaLi_c17410 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BaLi_c17410 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BaLi_c17420 PF00115 Cytochrome C and Quinol oxidase polypeptide I BaLi_c17430 PF00510 Cytochrome c oxidase subunit III BaLi_c17440 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BaLi_c17450 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BaLi_c17460 PF08868 YugN-like family BaLi_c17470 PF00571 CBS domain BaLi_c17480 PF00188 Cysteine-rich secretory protein family BaLi_c17480 PF14504 CAP-associated N-terminal BaLi_c17490 PF14071 Putative coat protein BaLi_c17500 PF14003 YlbE-like protein BaLi_c17510 PF06133 Control of competence regulator ComK, YlbF/YmcA BaLi_c17520 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BaLi_c17540 PF01467 Cytidylyltransferase-like BaLi_c17550 PF07670 Nucleoside recognition BaLi_c17560 PF13180 PDZ domain BaLi_c17560 PF05362 Lon protease (S16) C-terminal proteolytic domain BaLi_c17570 PF05636 HIGH Nucleotidyl Transferase BaLi_c17580 PF02620 Large ribosomal RNA subunit accumulation protein YceD BaLi_c17590 PF01783 Ribosomal L32p protein family BaLi_c17610 PF00583 Acetyltransferase (GNAT) family BaLi_c17620 PF08546 Ketopantoate reductase PanE/ApbA C terminal BaLi_c17620 PF02558 Ketopantoate reductase PanE/ApbA BaLi_c17630 PF10079 Bacillithiol biosynthesis BshC BaLi_c17640 PF02381 MraZ protein, putative antitoxin-like BaLi_c17650 PF01795 MraW methylase family BaLi_c17680 PF00905 Penicillin binding protein transpeptidase domain BaLi_c17680 PF03793 PASTA domain BaLi_c17680 PF03717 Penicillin-binding Protein dimerisation domain BaLi_c17690 PF08245 Mur ligase middle domain BaLi_c17690 PF01225 Mur ligase family, catalytic domain BaLi_c17690 PF02875 Mur ligase family, glutamate ligase domain BaLi_c17700 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 BaLi_c17700 PF00953 Glycosyl transferase family 4 BaLi_c17710 PF08245 Mur ligase middle domain BaLi_c17710 PF02875 Mur ligase family, glutamate ligase domain BaLi_c17720 PF01098 Cell cycle protein BaLi_c17730 PF03033 Glycosyltransferase family 28 N-terminal domain BaLi_c17730 PF04101 Glycosyltransferase family 28 C-terminal domain BaLi_c17740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BaLi_c17740 PF01565 FAD binding domain BaLi_c17750 PF08478 POTRA domain, FtsQ-type BaLi_c17760 PF05949 Bacterial protein of unknown function (DUF881) BaLi_c17770 PF05949 Bacterial protein of unknown function (DUF881) BaLi_c17780 PF06947 Protein of unknown function (DUF1290) BaLi_c17790 PF02491 SHS2 domain inserted in FTSA BaLi_c17800 PF12327 FtsZ family, C-terminal domain BaLi_c17800 PF00091 Tubulin/FtsZ family, GTPase domain BaLi_c17820 PF05922 Peptidase inhibitor I9 BaLi_c17820 PF00082 Subtilase family BaLi_c17830 PF05922 Peptidase inhibitor I9 BaLi_c17830 PF00082 Subtilase family BaLi_c17840 PF03419 Sporulation factor SpoIIGA BaLi_c17850 PF04545 Sigma-70, region 4 BaLi_c17850 PF04542 Sigma-70 region 2 BaLi_c17860 PF04545 Sigma-70, region 4 BaLi_c17860 PF04539 Sigma-70 region 3 BaLi_c17860 PF04542 Sigma-70 region 2 BaLi_c17870 PF00005 ABC transporter BaLi_c17880 PF08241 Methyltransferase domain BaLi_c17890 PF05239 PRC-barrel domain BaLi_c17910 PF01168 Alanine racemase, N-terminal domain BaLi_c17920 PF04472 Cell division protein SepF BaLi_c17930 PF02325 YGGT family BaLi_c17940 PF17774 Putative RNA-binding domain in YlmH BaLi_c17940 PF01479 S4 domain BaLi_c17950 PF05103 DivIVA protein BaLi_c17960 PF06827 Zinc finger found in FPG and IleRS BaLi_c17960 PF00133 tRNA synthetases class I (I, L, M and V) BaLi_c17960 PF08264 Anticodon-binding domain of tRNA BaLi_c17970 PF01258 Prokaryotic dksA/traR C4-type zinc finger BaLi_c17980 PF01252 Signal peptidase (SPase) II BaLi_c17990 PF01479 S4 domain BaLi_c17990 PF00849 RNA pseudouridylate synthase BaLi_c18000 PF00156 Phosphoribosyl transferase domain BaLi_c18010 PF00860 Permease family BaLi_c18020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BaLi_c18020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BaLi_c18030 PF01979 Amidohydrolase family BaLi_c18040 PF00117 Glutamine amidotransferase class-I BaLi_c18040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BaLi_c18050 PF02142 MGS-like domain BaLi_c18050 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BaLi_c18050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BaLi_c18060 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BaLi_c18060 PF00175 Oxidoreductase NAD-binding domain BaLi_c18070 PF01180 Dihydroorotate dehydrogenase BaLi_c18080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BaLi_c18090 PF00156 Phosphoribosyl transferase domain BaLi_c18110 PF01507 Phosphoadenosine phosphosulfate reductase family BaLi_c18120 PF01384 Phosphate transporter family BaLi_c18130 PF14306 PUA-like domain BaLi_c18130 PF01747 ATP-sulfurylase BaLi_c18150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BaLi_c18160 PF01903 CbiX BaLi_c18190 PF00689 Cation transporting ATPase, C-terminus BaLi_c18190 PF00690 Cation transporter/ATPase, N-terminus BaLi_c18200 PF08340 Domain of unknown function (DUF1732) BaLi_c18200 PF03755 YicC-like family, N-terminal region BaLi_c18210 PF04025 Domain of unknown function (DUF370) BaLi_c18220 PF00625 Guanylate kinase BaLi_c18230 PF01192 RNA polymerase Rpb6 BaLi_c18240 PF02441 Flavoprotein BaLi_c18240 PF04127 DNA / pantothenate metabolism flavoprotein BaLi_c18250 PF18074 Primosomal protein N C-terminal domain BaLi_c18250 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BaLi_c18250 PF00271 Helicase conserved C-terminal domain BaLi_c18250 PF04851 Type III restriction enzyme, res subunit BaLi_c18250 PF17764 3′ DNA-binding domain (3′BD) BaLi_c18260 PF01327 Polypeptide deformylase BaLi_c18270 PF00551 Formyl transferase BaLi_c18270 PF02911 Formyl transferase, C-terminal domain BaLi_c18280 PF01189 16S rRNA methyltransferase RsmB/F BaLi_c18280 PF01029 NusB family BaLi_c18290 PF04055 Radical SAM superfamily BaLi_c18310 PF00069 Protein kinase domain BaLi_c18310 PF03793 PASTA domain BaLi_c18320 PF03193 RsgA GTPase BaLi_c18320 PF16745 RsgA N-terminal domain BaLi_c18330 PF00834 Ribulose-phosphate 3 epimerase family BaLi_c18340 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BaLi_c18340 PF04263 Thiamin pyrophosphokinase, catalytic domain BaLi_c18350 PF08183 Stage V sporulation protein family BaLi_c18360 PF00830 Ribosomal L28 family BaLi_c18370 PF03780 Asp23 family, cell envelope-related function BaLi_c18380 PF02734 DAK2 domain BaLi_c18380 PF13684 Dihydroxyacetone kinase family BaLi_c18390 PF01842 ACT domain BaLi_c18390 PF03315 Serine dehydratase beta chain BaLi_c18400 PF03313 Serine dehydratase alpha chain BaLi_c18410 PF00271 Helicase conserved C-terminal domain BaLi_c18410 PF00270 DEAD/DEAH box helicase BaLi_c18410 PF17191 RecG wedge domain BaLi_c18420 PF08279 HTH domain BaLi_c18420 PF03061 Thioesterase superfamily BaLi_c18430 PF02504 Fatty acid synthesis protein BaLi_c18440 PF00698 Acyl transferase domain BaLi_c18460 PF00550 Phosphopantetheine attachment site BaLi_c18470 PF14622 Ribonuclease-III-like BaLi_c18470 PF00035 Double-stranded RNA binding motif BaLi_c18480 PF06470 SMC proteins Flexible Hinge Domain BaLi_c18480 PF02463 RecF/RecN/SMC N terminal domain BaLi_c18490 PF02881 SRP54-type protein, helical bundle domain BaLi_c18490 PF00448 SRP54-type protein, GTPase domain BaLi_c18500 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BaLi_c18510 PF02978 Signal peptide binding domain BaLi_c18510 PF02881 SRP54-type protein, helical bundle domain BaLi_c18510 PF00448 SRP54-type protein, GTPase domain BaLi_c18520 PF00886 Ribosomal protein S16 BaLi_c18540 PF11068 YlqD protein BaLi_c18550 PF01782 RimM N-terminal domain BaLi_c18550 PF05239 PRC-barrel domain BaLi_c18560 PF01746 tRNA (Guanine-1)-methyltransferase BaLi_c18570 PF01245 Ribosomal protein L19 BaLi_c18580 PF01926 50S ribosome-binding GTPase BaLi_c18590 PF01351 Ribonuclease HII BaLi_c18610 PF01312 FlhB HrpN YscU SpaS Family BaLi_c18620 PF00549 CoA-ligase BaLi_c18620 PF08442 ATP-grasp domain BaLi_c18630 PF00549 CoA-ligase BaLi_c18630 PF02629 CoA binding domain BaLi_c18640 PF02481 DNA recombination-mediator protein A BaLi_c18650 PF01396 Topoisomerase DNA binding C4 zinc finger BaLi_c18650 PF01751 Toprim domain BaLi_c18650 PF01131 DNA topoisomerase BaLi_c18660 PF01134 Glucose inhibited division protein A BaLi_c18670 PF00589 Phage integrase family BaLi_c18670 PF02899 Phage integrase, N-terminal SAM-like domain BaLi_c18680 PF00227 Proteasome subunit BaLi_c18690 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c18690 PF10431 C-terminal, D2-small domain, of ClpB protein BaLi_c18690 PF07724 AAA domain (Cdc48 subfamily) BaLi_c18700 PF08222 CodY helix-turn-helix domain BaLi_c18700 PF06018 CodY GAF-like domain BaLi_c18720 PF00460 Flagella basal body rod protein BaLi_c18730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BaLi_c18730 PF00460 Flagella basal body rod protein BaLi_c18740 PF02049 Flagellar hook-basal body complex protein FliE BaLi_c18750 PF08345 Flagellar M-ring protein C-terminal BaLi_c18750 PF01514 Secretory protein of YscJ/FliF family BaLi_c18760 PF14842 FliG N-terminal domain BaLi_c18760 PF14841 FliG middle domain BaLi_c18760 PF01706 FliG C-terminal domain BaLi_c18770 PF02108 Flagellar assembly protein FliH BaLi_c18780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BaLi_c18780 PF18269 T3SS EscN ATPase C-terminal domain BaLi_c18780 PF02874 ATP synthase alpha/beta family, beta-barrel domain BaLi_c18790 PF02050 Flagellar FliJ protein BaLi_c18810 PF02120 Flagellar hook-length control protein FliK BaLi_c18820 PF03963 Flagellar hook capping protein - N-terminal region BaLi_c18830 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BaLi_c18830 PF00460 Flagella basal body rod protein BaLi_c18840 PF06289 Flagellar and Swarming motility proteins BaLi_c18850 PF03748 Flagellar basal body-associated protein FliL BaLi_c18860 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BaLi_c18860 PF02154 Flagellar motor switch protein FliM BaLi_c18870 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BaLi_c18870 PF04509 CheC-like family BaLi_c18880 PF00072 Response regulator receiver domain BaLi_c18890 PF04347 Flagellar biosynthesis protein, FliO BaLi_c18900 PF00813 FliP family BaLi_c18910 PF01313 Bacterial export proteins, family 3 BaLi_c18920 PF01311 Bacterial export proteins, family 1 BaLi_c18930 PF01312 FlhB HrpN YscU SpaS Family BaLi_c18940 PF00771 FHIPEP family BaLi_c18950 PF00448 SRP54-type protein, GTPase domain BaLi_c18960 PF10609 NUBPL iron-transfer P-loop NTPase BaLi_c18970 PF00072 Response regulator receiver domain BaLi_c18970 PF01339 CheB methylesterase BaLi_c18980 PF01627 Hpt domain BaLi_c18980 PF02895 Signal transducing histidine kinase, homodimeric domain BaLi_c18980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c18980 PF07194 P2 response regulator binding domain BaLi_c18980 PF01584 CheW-like domain BaLi_c18990 PF01584 CheW-like domain BaLi_c19000 PF04509 CheC-like family BaLi_c19010 PF03975 CheD chemotactic sensory transduction BaLi_c19020 PF04542 Sigma-70 region 2 BaLi_c19020 PF04539 Sigma-70 region 3 BaLi_c19020 PF04545 Sigma-70, region 4 BaLi_c19040 PF00318 Ribosomal protein S2 BaLi_c19050 PF00889 Elongation factor TS BaLi_c19060 PF00696 Amino acid kinase family BaLi_c19070 PF01765 Ribosome recycling factor BaLi_c19080 PF01255 Putative undecaprenyl diphosphate synthase BaLi_c19100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BaLi_c19100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BaLi_c19100 PF13288 DXP reductoisomerase C-terminal domain BaLi_c19110 PF17820 PDZ domain BaLi_c19110 PF02163 Peptidase family M50 BaLi_c19120 PF04073 Aminoacyl-tRNA editing domain BaLi_c19120 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BaLi_c19120 PF03129 Anticodon binding domain BaLi_c19130 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BaLi_c19130 PF02811 PHP domain BaLi_c19130 PF14480 DNA polymerase III polC-type N-terminus I BaLi_c19130 PF14579 Helix-hairpin-helix motif BaLi_c19130 PF11490 DNA polymerase III polC-type N-terminus II BaLi_c19130 PF07733 Bacterial DNA polymerase III alpha NTPase domain BaLi_c19130 PF00929 Exonuclease BaLi_c19140 PF00759 Glycosyl hydrolase family 9 BaLi_c19140 PF00942 Cellulose binding domain BaLi_c19150 PF00759 Glycosyl hydrolase family 9 BaLi_c19150 PF00942 Cellulose binding domain BaLi_c19150 PF02011 Glycosyl hydrolase family 48 BaLi_c19160 PF03442 Carbohydrate binding domain X2 BaLi_c19160 PF00150 Cellulase (glycosyl hydrolase family 5) BaLi_c19160 PF18448 Carbohydrate binding domain BaLi_c19180 PF17384 RimP C-terminal SH3 domain BaLi_c19180 PF02576 RimP N-terminal domain BaLi_c19190 PF00575 S1 RNA binding domain BaLi_c19190 PF13184 NusA-like KH domain BaLi_c19190 PF08529 NusA N-terminal domain BaLi_c19200 PF04296 Protein of unknown function (DUF448) BaLi_c19210 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BaLi_c19220 PF00009 Elongation factor Tu GTP binding domain BaLi_c19220 PF11987 Translation-initiation factor 2 BaLi_c19220 PF04760 Translation initiation factor IF-2, N-terminal region BaLi_c19230 PF04456 Protein of unknown function (DUF503) BaLi_c19240 PF02033 Ribosome-binding factor A BaLi_c19250 PF16198 tRNA pseudouridylate synthase B C-terminal domain BaLi_c19250 PF01509 TruB family pseudouridylate synthase (N terminal domain) BaLi_c19260 PF01687 Riboflavin kinase BaLi_c19260 PF06574 FAD synthetase BaLi_c19270 PF00312 Ribosomal protein S15 BaLi_c19280 PF01138 3' exoribonuclease family, domain 1 BaLi_c19280 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BaLi_c19280 PF00013 KH domain BaLi_c19280 PF03725 3' exoribonuclease family, domain 2 BaLi_c19280 PF00575 S1 RNA binding domain BaLi_c19290 PF01522 Polysaccharide deacetylase BaLi_c19300 PF00675 Insulinase (Peptidase family M16) BaLi_c19300 PF05193 Peptidase M16 inactive domain BaLi_c19310 PF05239 PRC-barrel domain BaLi_c19320 PF16924 Dipicolinate synthase subunit A N-terminal domain BaLi_c19320 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BaLi_c19330 PF02441 Flavoprotein BaLi_c19340 PF01118 Semialdehyde dehydrogenase, NAD binding domain BaLi_c19340 PF02774 Semialdehyde dehydrogenase, dimerisation domain BaLi_c19350 PF00696 Amino acid kinase family BaLi_c19350 PF13840 ACT domain BaLi_c19360 PF00701 Dihydrodipicolinate synthetase family BaLi_c19370 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BaLi_c19370 PF00753 Metallo-beta-lactamase superfamily BaLi_c19370 PF17770 Ribonuclease J C-terminal domain BaLi_c19380 PF00574 Clp protease BaLi_c19390 PF14035 YlzJ-like protein BaLi_c19400 PF17854 FtsK alpha domain BaLi_c19400 PF09397 Ftsk gamma domain BaLi_c19400 PF01580 FtsK/SpoIIIE family BaLi_c19410 PF00392 Bacterial regulatory proteins, gntR family BaLi_c19410 PF07702 UTRA domain BaLi_c19420 PF07690 Major Facilitator Superfamily BaLi_c19430 PF05193 Peptidase M16 inactive domain BaLi_c19440 PF05193 Peptidase M16 inactive domain BaLi_c19440 PF00675 Insulinase (Peptidase family M16) BaLi_c19460 PF11588 Protein of unknown function (DUF3243) BaLi_c19480 PF11868 Protein of unknown function (DUF3388) BaLi_c19490 PF13464 Domain of unknown function (DUF4115) BaLi_c19500 PF01066 CDP-alcohol phosphatidyltransferase BaLi_c19510 PF02464 Competence-damaged protein BaLi_c19510 PF18146 Damage-inducible protein CinA KH domain BaLi_c19510 PF00994 Probable molybdopterin binding domain BaLi_c19520 PF00154 recA bacterial DNA recombination protein BaLi_c19530 PF01966 HD domain BaLi_c19530 PF00013 KH domain BaLi_c19530 PF12072 Domain of unknown function (DUF3552) BaLi_c19540 PF13277 YmdB-like protein BaLi_c19550 PF04232 Stage V sporulation protein S (SpoVS) BaLi_c19560 PF01244 Membrane dipeptidase (Peptidase family M19) BaLi_c19570 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c19570 PF00107 Zinc-binding dehydrogenase BaLi_c19580 PF00155 Aminotransferase class I and II BaLi_c19590 PF04055 Radical SAM superfamily BaLi_c19590 PF01938 TRAM domain BaLi_c19590 PF00919 Uncharacterized protein family UPF0004 BaLi_c19600 PF06133 Control of competence regulator ComK, YlbF/YmcA BaLi_c19610 PF10628 Outer spore coat protein E (CotE) BaLi_c19620 PF00488 MutS domain V BaLi_c19620 PF05192 MutS domain III BaLi_c19620 PF05190 MutS family domain IV BaLi_c19620 PF01624 MutS domain I BaLi_c19620 PF05188 MutS domain II BaLi_c19630 PF08676 MutL C terminal dimerisation domain BaLi_c19630 PF01119 DNA mismatch repair protein, C-terminal domain BaLi_c19640 PF03992 Antibiotic biosynthesis monooxygenase BaLi_c19670 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c19670 PF13181 Tetratricopeptide repeat BaLi_c19690 PF04740 LXG domain of WXG superfamily BaLi_c19690 PF14449 Pre-toxin TG BaLi_c19710 PF07683 Cobalamin synthesis protein cobW C-terminal domain BaLi_c19710 PF02492 CobW/HypB/UreG, nucleotide-binding domain BaLi_c19730 PF11208 Protein of unknown function (DUF2992) BaLi_c19750 PF01593 Flavin containing amine oxidoreductase BaLi_c19760 PF06912 Protein of unknown function (DUF1275) BaLi_c19770 PF03471 Transporter associated domain BaLi_c19770 PF02080 TrkA-C domain BaLi_c19770 PF00999 Sodium/hydrogen exchanger family BaLi_c19780 PF07690 Major Facilitator Superfamily BaLi_c19800 PF01906 Putative heavy-metal-binding BaLi_c19810 PF09335 SNARE associated Golgi protein BaLi_c19820 PF00144 Beta-lactamase BaLi_c19820 PF11954 Domain of unknown function (DUF3471) BaLi_c19830 PF04101 Glycosyltransferase family 28 C-terminal domain BaLi_c19840 PF13520 Amino acid permease BaLi_c19850 PF07875 Coat F domain BaLi_c19870 PF00704 Glycosyl hydrolases family 18 BaLi_c19870 PF01476 LysM domain BaLi_c19880 PF00440 Bacterial regulatory proteins, tetR family BaLi_c19890 PF12680 SnoaL-like domain BaLi_c19900 PF01370 NAD dependent epimerase/dehydratase family BaLi_c19920 PF02566 OsmC-like protein BaLi_c19930 PF00893 Small Multidrug Resistance protein BaLi_c19940 PF00893 Small Multidrug Resistance protein BaLi_c19960 PF12788 YmaF family BaLi_c19980 PF17209 Hfq protein BaLi_c20010 PF07972 NrdI Flavodoxin like BaLi_c20020 PF00317 Ribonucleotide reductase, all-alpha domain BaLi_c20020 PF08343 Ribonucleotide reductase N-terminal BaLi_c20020 PF02867 Ribonucleotide reductase, barrel domain BaLi_c20030 PF00268 Ribonucleotide reductase, small chain BaLi_c20050 PF00753 Metallo-beta-lactamase superfamily BaLi_c20060 PF01592 NifU-like N terminal domain BaLi_c20090 PF07729 FCD domain BaLi_c20090 PF00392 Bacterial regulatory proteins, gntR family BaLi_c20100 PF13536 Putative multidrug resistance efflux transporter BaLi_c20110 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c20110 PF05036 Sporulation related domain BaLi_c20170 PF00440 Bacterial regulatory proteins, tetR family BaLi_c20170 PF17932 Tetracyclin repressor-like, C-terminal domain BaLi_c20200 PF05378 Hydantoinase/oxoprolinase N-terminal region BaLi_c20200 PF01968 Hydantoinase/oxoprolinase BaLi_c20220 PF02538 Hydantoinase B/oxoprolinase BaLi_c20250 PF07690 Major Facilitator Superfamily BaLi_c20260 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c20290 PF01337 Barstar (barnase inhibitor) BaLi_c20330 PF03253 Urea transporter BaLi_c20340 PF00547 Urease, gamma subunit BaLi_c20350 PF00699 Urease beta subunit BaLi_c20360 PF01979 Amidohydrolase family BaLi_c20360 PF00449 Urease alpha-subunit, N-terminal domain BaLi_c20370 PF05194 UreE urease accessory protein, C-terminal domain BaLi_c20370 PF02814 UreE urease accessory protein, N-terminal domain BaLi_c20380 PF01730 UreF BaLi_c20390 PF02492 CobW/HypB/UreG, nucleotide-binding domain BaLi_c20400 PF01774 UreD urease accessory protein BaLi_c20410 PF13386 Cytochrome C biogenesis protein transmembrane region BaLi_c20420 PF03551 Transcriptional regulator PadR-like family BaLi_c20420 PF10400 Virulence activator alpha C-term BaLi_c20470 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c20470 PF17866 AAA lid domain BaLi_c20480 PF13167 GTP-binding GTPase N-terminal BaLi_c20480 PF16360 GTP-binding GTPase Middle Region BaLi_c20480 PF01926 50S ribosome-binding GTPase BaLi_c20490 PF06838 Methionine gamma-lyase BaLi_c20500 PF13411 MerR HTH family regulatory protein BaLi_c20510 PF03951 Glutamine synthetase, beta-Grasp domain BaLi_c20510 PF00120 Glutamine synthetase, catalytic domain BaLi_c20550 PF00120 Glutamine synthetase, catalytic domain BaLi_c20550 PF03951 Glutamine synthetase, beta-Grasp domain BaLi_c20650 PF02080 TrkA-C domain BaLi_c20660 PF00999 Sodium/hydrogen exchanger family BaLi_c20730 PF16302 Domain of unknown function (DUF4944) BaLi_c20780 PF00440 Bacterial regulatory proteins, tetR family BaLi_c20780 PF17934 Tetracyclin repressor-like, C-terminal domain BaLi_c20790 PF00893 Small Multidrug Resistance protein BaLi_c20800 PF00893 Small Multidrug Resistance protein BaLi_c20810 PF13302 Acetyltransferase (GNAT) domain BaLi_c20840 PF00578 AhpC/TSA family BaLi_c20850 PF05067 Manganese containing catalase BaLi_c20890 PF08360 QacR-like protein, C-terminal region BaLi_c20890 PF00440 Bacterial regulatory proteins, tetR family BaLi_c20900 PF01047 MarR family BaLi_c20910 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c20920 PF01613 Flavin reductase like domain BaLi_c20930 PF03358 NADPH-dependent FMN reductase BaLi_c20960 PF00303 Thymidylate synthase BaLi_c20970 PF14040 Deoxyribonuclease NucA/NucB BaLi_c20980 PF01726 LexA DNA binding domain BaLi_c20980 PF00717 Peptidase S24-like BaLi_c20990 PF01476 LysM domain BaLi_c21000 PF00239 Resolvase, N terminal domain BaLi_c21010 PF05979 Bacterial protein of unknown function (DUF896) BaLi_c21020 PF02779 Transketolase, pyrimidine binding domain BaLi_c21020 PF02780 Transketolase, C-terminal domain BaLi_c21020 PF00456 Transketolase, thiamine diphosphate binding domain BaLi_c21030 PF10747 Sporulation inhibitor of replication protein SirA BaLi_c21040 PF03672 Uncharacterised protein family (UPF0154) BaLi_c21050 PF09388 Spo0E like sporulation regulatory protein BaLi_c21060 PF02683 Cytochrome C biogenesis protein transmembrane region BaLi_c21070 PF00072 Response regulator receiver domain BaLi_c21080 PF07301 Protein of unknown function (DUF1453) BaLi_c21090 PF11084 Protein of unknown function (DUF2621) BaLi_c21110 PF08179 Small acid-soluble spore protein P family BaLi_c21130 PF00694 Aconitase C-terminal domain BaLi_c21130 PF00330 Aconitase family (aconitate hydratase) BaLi_c21140 PF00578 AhpC/TSA family BaLi_c21150 PF08177 Small acid-soluble spore protein N family BaLi_c21170 PF03061 Thioesterase superfamily BaLi_c21210 PF01521 Iron-sulphur cluster biosynthesis BaLi_c21220 PF02660 Glycerol-3-phosphate acyltransferase BaLi_c21230 PF13380 CoA binding domain BaLi_c21240 PF00204 DNA gyrase B BaLi_c21240 PF00986 DNA gyrase B subunit, carboxyl terminus BaLi_c21240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c21240 PF01751 Toprim domain BaLi_c21250 PF03989 DNA gyrase C-terminal domain, beta-propeller BaLi_c21250 PF00521 DNA gyrase/topoisomerase IV, subunit A BaLi_c21260 PF00392 Bacterial regulatory proteins, gntR family BaLi_c21280 PF00596 Class II Aldolase and Adducin N-terminal domain BaLi_c21290 PF11762 L-arabinose isomerase C-terminal domain BaLi_c21290 PF02610 L-arabinose isomerase BaLi_c21300 PF00083 Sugar (and other) transporter BaLi_c21310 PF00106 short chain dehydrogenase BaLi_c21350 PF01235 Sodium:alanine symporter family BaLi_c21370 PF02665 Nitrate reductase gamma subunit BaLi_c21380 PF02613 Nitrate reductase delta subunit BaLi_c21390 PF13247 4Fe-4S dicluster domain BaLi_c21390 PF14711 Respiratory nitrate reductase beta C-terminal BaLi_c21400 PF14710 Respiratory nitrate reductase alpha N-terminal BaLi_c21400 PF01568 Molydopterin dinucleotide binding domain BaLi_c21400 PF00384 Molybdopterin oxidoreductase BaLi_c21430 PF06463 Molybdenum Cofactor Synthesis C BaLi_c21430 PF04055 Radical SAM superfamily BaLi_c21450 PF14256 YwiC-like protein BaLi_c21460 PF00325 Bacterial regulatory proteins, crp family BaLi_c21460 PF00027 Cyclic nucleotide-binding domain BaLi_c21470 PF07690 Major Facilitator Superfamily BaLi_c21490 PF13545 Crp-like helix-turn-helix domain BaLi_c21490 PF00027 Cyclic nucleotide-binding domain BaLi_c21500 PF00115 Cytochrome C and Quinol oxidase polypeptide I BaLi_c21510 PF04405 Domain of Unknown function (DUF542) BaLi_c21510 PF01814 Hemerythrin HHE cation binding domain BaLi_c21520 PF07098 Protein of unknown function (DUF1360) BaLi_c21530 PF00150 Cellulase (glycosyl hydrolase family 5) BaLi_c21530 PF00942 Cellulose binding domain BaLi_c21540 PF17452 Uncharacterized YnfE-like BaLi_c21580 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c21610 PF13229 Right handed beta helix region BaLi_c21620 PF05525 Branched-chain amino acid transport protein BaLi_c21630 PF00107 Zinc-binding dehydrogenase BaLi_c21630 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c21640 PF12706 Beta-lactamase superfamily domain BaLi_c21690 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c21700 PF00171 Aldehyde dehydrogenase family BaLi_c21710 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BaLi_c21710 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BaLi_c21720 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c21720 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c21720 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c21730 PF01238 Phosphomannose isomerase type I BaLi_c21740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c21740 PF02378 Phosphotransferase system, EIIC BaLi_c21740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c21770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c21770 PF00874 PRD domain BaLi_c21770 PF05043 Mga helix-turn-helix domain BaLi_c21770 PF08279 HTH domain BaLi_c21790 PF00005 ABC transporter BaLi_c21800 PF00392 Bacterial regulatory proteins, gntR family BaLi_c21810 PF00106 short chain dehydrogenase BaLi_c21820 PF03786 D-mannonate dehydratase (UxuA) BaLi_c21830 PF16338 Domain of unknown function (DUF4968) BaLi_c21830 PF13802 Galactose mutarotase-like BaLi_c21830 PF17137 Domain of unknown function (DUF5110) BaLi_c21830 PF01055 Glycosyl hydrolases family 31 BaLi_c21840 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component BaLi_c21850 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component BaLi_c21860 PF03480 Bacterial extracellular solute-binding protein, family 7 BaLi_c21870 PF00356 Bacterial regulatory proteins, lacI family BaLi_c21880 PF01451 Low molecular weight phosphotyrosine protein phosphatase BaLi_c21890 PF02040 Arsenical pump membrane protein BaLi_c21900 PF01022 Bacterial regulatory protein, arsR family BaLi_c21910 PF08818 Domain of unknown function (DU1801) BaLi_c21930 PF06800 Sugar transport protein BaLi_c21940 PF02638 Glycosyl hydrolase-like 10 BaLi_c21960 PF04055 Radical SAM superfamily BaLi_c21970 PF01228 Glycine radical BaLi_c21970 PF02901 Pyruvate formate lyase-like BaLi_c21980 PF00534 Glycosyl transferases group 1 BaLi_c21980 PF13477 Glycosyl transferase 4-like BaLi_c22020 PF00005 ABC transporter BaLi_c22030 PF00440 Bacterial regulatory proteins, tetR family BaLi_c22030 PF17932 Tetracyclin repressor-like, C-terminal domain BaLi_c22040 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c22050 PF07849 Protein of unknown function (DUF1641) BaLi_c22070 PF12728 Helix-turn-helix domain BaLi_c22090 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22090 PF00501 AMP-binding enzyme BaLi_c22090 PF16177 Acetyl-coenzyme A synthetase N-terminus BaLi_c22100 PF01039 Carboxyl transferase domain BaLi_c22110 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c22120 PF00682 HMGL-like BaLi_c22130 PF00364 Biotin-requiring enzyme BaLi_c22140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BaLi_c22140 PF02785 Biotin carboxylase C-terminal domain BaLi_c22140 PF00289 Biotin carboxylase, N-terminal domain BaLi_c22150 PF00501 AMP-binding enzyme BaLi_c22150 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22150 PF00668 Condensation domain BaLi_c22150 PF00550 Phosphopantetheine attachment site BaLi_c22150 PF00975 Thioesterase domain BaLi_c22160 PF00668 Condensation domain BaLi_c22160 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22160 PF00501 AMP-binding enzyme BaLi_c22160 PF00550 Phosphopantetheine attachment site BaLi_c22170 PF00501 AMP-binding enzyme BaLi_c22170 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22170 PF00668 Condensation domain BaLi_c22170 PF00550 Phosphopantetheine attachment site BaLi_c22180 PF00550 Phosphopantetheine attachment site BaLi_c22180 PF00668 Condensation domain BaLi_c22180 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22180 PF00501 AMP-binding enzyme BaLi_c22190 PF00501 AMP-binding enzyme BaLi_c22190 PF00550 Phosphopantetheine attachment site BaLi_c22190 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22190 PF00668 Condensation domain BaLi_c22200 PF00501 AMP-binding enzyme BaLi_c22200 PF13193 AMP-binding enzyme C-terminal domain BaLi_c22210 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c22210 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c22210 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c22220 PF02525 Flavodoxin-like fold BaLi_c22230 PF01638 HxlR-like helix-turn-helix BaLi_c22240 PF00171 Aldehyde dehydrogenase family BaLi_c22250 PF00696 Amino acid kinase family BaLi_c22250 PF01472 PUA domain BaLi_c22260 PF14748 Pyrroline-5-carboxylate reductase dimerisation BaLi_c22260 PF03807 NADP oxidoreductase coenzyme F420-dependent BaLi_c22270 PF04239 Protein of unknown function (DUF421) BaLi_c22280 PF01384 Phosphate transporter family BaLi_c22290 PF01507 Phosphoadenosine phosphosulfate reductase family BaLi_c22300 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) BaLi_c22310 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c22320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BaLi_c22320 PF13378 Enolase C-terminal domain-like BaLi_c22330 PF07690 Major Facilitator Superfamily BaLi_c22340 PF00535 Glycosyl transferase family 2 BaLi_c22370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BaLi_c22370 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c22380 PF04898 Glutamate synthase central domain BaLi_c22380 PF01493 GXGXG motif BaLi_c22380 PF00310 Glutamine amidotransferases class-II BaLi_c22380 PF01645 Conserved region in glutamate synthase BaLi_c22390 PF03466 LysR substrate binding domain BaLi_c22390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c22450 PF00005 ABC transporter BaLi_c22450 PF00664 ABC transporter transmembrane region BaLi_c22460 PF00664 ABC transporter transmembrane region BaLi_c22460 PF00005 ABC transporter BaLi_c22470 PF00067 Cytochrome P450 BaLi_c22480 PF00106 short chain dehydrogenase BaLi_c22490 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BaLi_c22490 PF00391 PEP-utilising enzyme, mobile domain BaLi_c22500 PF07690 Major Facilitator Superfamily BaLi_c22510 PF01568 Molydopterin dinucleotide binding domain BaLi_c22510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BaLi_c22510 PF00384 Molybdopterin oxidoreductase BaLi_c22520 PF01047 MarR family BaLi_c22530 PF07690 Major Facilitator Superfamily BaLi_c22540 PF03845 Spore germination protein BaLi_c22550 PF05504 Spore germination B3/ GerAC like, C-terminal BaLi_c22560 PF03845 Spore germination protein BaLi_c22570 PF03845 Spore germination protein BaLi_c22580 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c22600 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c22600 PF02743 Cache domain BaLi_c22600 PF00672 HAMP domain BaLi_c22610 PF01588 Putative tRNA binding domain BaLi_c22620 PF00082 Subtilase family BaLi_c22630 PF17329 Family of unknown function (DUF5367) BaLi_c22640 PF17932 Tetracyclin repressor-like, C-terminal domain BaLi_c22640 PF00440 Bacterial regulatory proteins, tetR family BaLi_c22650 PF01047 MarR family BaLi_c22660 PF01966 HD domain BaLi_c22680 PF14158 YndJ-like protein BaLi_c22690 PF13761 Domain of unknown function (DUF4166) BaLi_c22710 PF13305 Tetracyclin repressor-like, C-terminal domain BaLi_c22710 PF00440 Bacterial regulatory proteins, tetR family BaLi_c22720 PF00753 Metallo-beta-lactamase superfamily BaLi_c22730 PF06445 GyrI-like small molecule binding domain BaLi_c22750 PF13280 WYL domain BaLi_c22750 PF08279 HTH domain BaLi_c22770 PF01022 Bacterial regulatory protein, arsR family BaLi_c22810 PF00324 Amino acid permease BaLi_c22830 PF02719 Polysaccharide biosynthesis protein BaLi_c22860 PF00534 Glycosyl transferases group 1 BaLi_c22860 PF13439 Glycosyltransferase Family 4 BaLi_c22870 PF04238 Protein of unknown function (DUF420) BaLi_c22900 PF02016 LD-carboxypeptidase N-terminal domain BaLi_c22900 PF17676 LD-carboxypeptidase C-terminal domain BaLi_c22910 PF00474 Sodium:solute symporter family BaLi_c22920 PF06725 3D domain BaLi_c22920 PF01476 LysM domain BaLi_c22930 PF00570 HRDC domain BaLi_c22930 PF00271 Helicase conserved C-terminal domain BaLi_c22930 PF00270 DEAD/DEAH box helicase BaLi_c22930 PF09382 RQC domain BaLi_c22930 PF16124 RecQ zinc-binding BaLi_c22970 PF04237 YjbR BaLi_c22980 PF14449 Pre-toxin TG BaLi_c22980 PF14431 YwqJ-like deaminase BaLi_c22980 PF04740 LXG domain of WXG superfamily BaLi_c22990 PF07849 Protein of unknown function (DUF1641) BaLi_c23000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BaLi_c23000 PF00384 Molybdopterin oxidoreductase BaLi_c23000 PF01568 Molydopterin dinucleotide binding domain BaLi_c23000 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BaLi_c23000 PF12838 4Fe-4S dicluster domain BaLi_c23010 PF14172 Domain of unknown function (DUF4309) BaLi_c23030 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH BaLi_c23030 PF04740 LXG domain of WXG superfamily BaLi_c23050 PF05065 Phage capsid family BaLi_c23060 PF07238 PilZ domain BaLi_c23060 PF07317 Flagellar regulator YcgR BaLi_c23100 PF13217 Protein of unknown function (DUF4025) BaLi_c23110 PF03795 YCII-related domain BaLi_c23150 PF01979 Amidohydrolase family BaLi_c23160 PF11122 Inner spore coat protein D BaLi_c23180 PF08386 TAP-like protein BaLi_c23180 PF00561 alpha/beta hydrolase fold BaLi_c23200 PF01810 LysE type translocator BaLi_c23210 PF00253 Ribosomal protein S14p/S29e BaLi_c23230 PF00391 PEP-utilising enzyme, mobile domain BaLi_c23230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain BaLi_c23260 PF10710 Protein of unknown function (DUF2512) BaLi_c23270 PF05163 DinB family BaLi_c23280 PF02525 Flavodoxin-like fold BaLi_c23290 PF00144 Beta-lactamase BaLi_c23310 PF00155 Aminotransferase class I and II BaLi_c23320 PF01258 Prokaryotic dksA/traR C4-type zinc finger BaLi_c23330 PF08000 Bacterial PH domain BaLi_c23350 PF00171 Aldehyde dehydrogenase family BaLi_c23360 PF07690 Major Facilitator Superfamily BaLi_c23370 PF13302 Acetyltransferase (GNAT) domain BaLi_c23390 PF13249 Squalene-hopene cyclase N-terminal domain BaLi_c23390 PF13243 Squalene-hopene cyclase C-terminal domain BaLi_c23400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BaLi_c23400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BaLi_c23420 PF00209 Sodium:neurotransmitter symporter family BaLi_c23430 PF01758 Sodium Bile acid symporter family BaLi_c23440 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BaLi_c23440 PF00364 Biotin-requiring enzyme BaLi_c23440 PF02817 e3 binding domain BaLi_c23450 PF16870 2-oxoglutarate dehydrogenase C-terminal BaLi_c23450 PF00676 Dehydrogenase E1 component BaLi_c23450 PF02779 Transketolase, pyrimidine binding domain BaLi_c23460 PF00092 von Willebrand factor type A domain BaLi_c23470 PF07728 AAA domain (dynein-related subfamily) BaLi_c23480 PF13627 Prokaryotic lipoprotein-attachment site BaLi_c23480 PF00080 Copper/zinc superoxide dismutase (SODC) BaLi_c23490 PF01476 LysM domain BaLi_c23490 PF00877 NlpC/P60 family BaLi_c23500 PF01554 MatE BaLi_c23510 PF02585 GlcNAc-PI de-N-acetylase BaLi_c23520 PF08830 Protein of unknown function (DUF1806) BaLi_c23530 PF00892 EamA-like transporter family BaLi_c23550 PF03330 Lytic transglycolase BaLi_c23590 PF01638 HxlR-like helix-turn-helix BaLi_c23600 PF00881 Nitroreductase family BaLi_c23610 PF01738 Dienelactone hydrolase family BaLi_c23620 PF11755 Protein of unknown function (DUF3311) BaLi_c23630 PF00474 Sodium:solute symporter family BaLi_c23640 PF17820 PDZ domain BaLi_c23640 PF01471 Putative peptidoglycan binding domain BaLi_c23640 PF03572 Peptidase family S41 BaLi_c23650 PF08241 Methyltransferase domain BaLi_c23670 PF02557 D-alanyl-D-alanine carboxypeptidase BaLi_c23680 PF01048 Phosphorylase superfamily BaLi_c23690 PF03773 Predicted permease BaLi_c23720 PF14191 YodL-like BaLi_c23730 PF01569 PAP2 superfamily BaLi_c23740 PF14162 YozD-like protein BaLi_c23770 PF06855 YozE SAM-like fold BaLi_c23780 PF14122 YokU-like protein, putative antitoxin BaLi_c23790 PF12544 Lysine-2,3-aminomutase BaLi_c23800 PF00583 Acetyltransferase (GNAT) family BaLi_c23810 PF07687 Peptidase dimerisation domain BaLi_c23810 PF01546 Peptidase family M20/M25/M40 BaLi_c23820 PF01144 Coenzyme A transferase BaLi_c23830 PF01144 Coenzyme A transferase BaLi_c23840 PF00202 Aminotransferase class-III BaLi_c23860 PF00583 Acetyltransferase (GNAT) family BaLi_c23880 PF02463 RecF/RecN/SMC N terminal domain BaLi_c23890 PF01641 SelR domain BaLi_c23900 PF01625 Peptide methionine sulfoxide reductase BaLi_c23910 PF01047 MarR family BaLi_c23930 PF00990 Diguanylate cyclase, GGDEF domain BaLi_c23930 PF07694 5TMR of 5TMR-LYT BaLi_c23940 PF01554 MatE BaLi_c23960 PF17431 Uncharacterized YmpT-like BaLi_c23970 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) BaLi_c23980 PF13472 GDSL-like Lipase/Acylhydrolase family BaLi_c23990 PF02630 SCO1/SenC BaLi_c24000 PF02645 Uncharacterised protein, DegV family COG1307 BaLi_c24010 PF10751 Protein of unknown function (DUF2535) BaLi_c24020 PF00585 C-terminal regulatory domain of Threonine dehydratase BaLi_c24020 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c24030 PF08461 Ribonuclease R winged-helix domain BaLi_c24030 PF00158 Sigma-54 interaction domain BaLi_c24040 PF03006 Haemolysin-III related BaLi_c24060 PF00186 Dihydrofolate reductase BaLi_c24080 PF04608 Phosphatidylglycerophosphatase A BaLi_c24090 PF14005 YpjP-like protein BaLi_c24100 PF04445 Putative SAM-dependent methyltransferase BaLi_c24110 PF06491 Disulphide isomerase BaLi_c24120 PF00920 Dehydratase family BaLi_c24130 PF08712 Scaffold protein Nfu/NifU N terminal BaLi_c24130 PF13769 Virulence factor BaLi_c24140 PF01966 HD domain BaLi_c24150 PF00255 Glutathione peroxidase BaLi_c24160 PF01268 Formate--tetrahydrofolate ligase BaLi_c24170 PF04204 Homoserine O-succinyltransferase BaLi_c24180 PF00534 Glycosyl transferases group 1 BaLi_c24180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BaLi_c24200 PF00313 'Cold-shock' DNA-binding domain BaLi_c24220 PF10819 Protein of unknown function (DUF2564) BaLi_c24230 PF10782 Zinc-finger BaLi_c24240 PF13456 Reverse transcriptase-like BaLi_c24250 PF02592 Putative vitamin uptake transporter BaLi_c24260 PF13456 Reverse transcriptase-like BaLi_c24270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BaLi_c24270 PF01367 5'-3' exonuclease, C-terminal SAM fold BaLi_c24290 PF10752 Protein of unknown function (DUF2533) BaLi_c24300 PF00350 Dynamin family BaLi_c24310 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BaLi_c24320 PF00195 Chalcone and stilbene synthases, N-terminal domain BaLi_c24320 PF02797 Chalcone and stilbene synthases, C-terminal domain BaLi_c24340 PF00860 Permease family BaLi_c24350 PF00156 Phosphoribosyl transferase domain BaLi_c24360 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BaLi_c24370 PF13307 Helicase C-terminal domain BaLi_c24410 PF01170 Putative RNA methylase family UPF0020 BaLi_c24410 PF02926 THUMP domain BaLi_c24420 PF05103 DivIVA protein BaLi_c24430 PF06908 YspA SLOG family BaLi_c24440 PF11122 Inner spore coat protein D BaLi_c24450 PF13482 RNase_H superfamily BaLi_c24460 PF09369 Domain of unknown function (DUF1998) BaLi_c24460 PF00270 DEAD/DEAH box helicase BaLi_c24460 PF00271 Helicase conserved C-terminal domain BaLi_c24470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BaLi_c24490 PF14179 YppG-like protein BaLi_c24500 PF14178 YppF-like protein BaLi_c24510 PF08807 Bacterial domain of unknown function (DUF1798) BaLi_c24530 PF10720 Protein of unknown function (DUF2515) BaLi_c24540 PF03838 Recombination protein U BaLi_c24550 PF00905 Penicillin binding protein transpeptidase domain BaLi_c24550 PF00912 Transglycosylase BaLi_c24570 PF10576 Iron-sulfur binding domain of endonuclease III BaLi_c24570 PF00730 HhH-GPD superfamily base excision DNA repair protein BaLi_c24570 PF00633 Helix-hairpin-helix motif BaLi_c24580 PF07261 Replication initiation and membrane attachment BaLi_c24590 PF01336 OB-fold nucleic acid binding domain BaLi_c24590 PF00152 tRNA synthetases class II (D, K and N) BaLi_c24600 PF00155 Aminotransferase class I and II BaLi_c24610 PF03413 Peptidase propeptide and YPEB domain BaLi_c24610 PF17881 Domain of unknown function (DUF5590) BaLi_c24620 PF14084 Protein of unknown function (DUF4264) BaLi_c24630 PF04851 Type III restriction enzyme, res subunit BaLi_c24630 PF00929 Exonuclease BaLi_c24630 PF13307 Helicase C-terminal domain BaLi_c24640 PF02261 Aspartate decarboxylase BaLi_c24650 PF02569 Pantoate-beta-alanine ligase BaLi_c24660 PF02548 Ketopantoate hydroxymethyltransferase BaLi_c24680 PF03099 Biotin/lipoate A/B protein ligase family BaLi_c24680 PF02237 Biotin protein ligase C terminal domain BaLi_c24680 PF08279 HTH domain BaLi_c24690 PF12627 Probable RNA and SrmB- binding site of polymerase A BaLi_c24690 PF13735 tRNA nucleotidyltransferase domain 2 putative BaLi_c24690 PF01743 Poly A polymerase head domain BaLi_c24700 PF13439 Glycosyltransferase Family 4 BaLi_c24700 PF00534 Glycosyl transferases group 1 BaLi_c24710 PF02585 GlcNAc-PI de-N-acetylase BaLi_c24720 PF02142 MGS-like domain BaLi_c24730 PF01113 Dihydrodipicolinate reductase, N-terminus BaLi_c24730 PF05173 Dihydrodipicolinate reductase, C-terminus BaLi_c24740 PF03819 MazG nucleotide pyrophosphohydrolase domain BaLi_c24750 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c24750 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c24760 PF09577 Sporulation protein YpjB (SpoYpjB) BaLi_c24770 PF07187 Protein of unknown function (DUF1405) BaLi_c24780 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BaLi_c24780 PF00032 Cytochrome b(C-terminal)/b6/petD BaLi_c24790 PF00033 Cytochrome b/b6/petB BaLi_c24800 PF00355 Rieske [2Fe-2S] domain BaLi_c24810 PF10673 Protein of unknown function (DUF2487) BaLi_c24820 PF08858 IDEAL domain BaLi_c24820 PF08864 UPF0302 domain BaLi_c24840 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BaLi_c24850 PF01842 ACT domain BaLi_c24850 PF02153 Prephenate dehydrogenase BaLi_c24860 PF00155 Aminotransferase class I and II BaLi_c24870 PF00290 Tryptophan synthase alpha chain BaLi_c24880 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c24890 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BaLi_c24900 PF00218 Indole-3-glycerol phosphate synthase BaLi_c24910 PF00591 Glycosyl transferase family, a/b domain BaLi_c24910 PF02885 Glycosyl transferase family, helical bundle domain BaLi_c24920 PF00425 chorismate binding enzyme BaLi_c24920 PF04715 Anthranilate synthase component I, N terminal region BaLi_c24930 PF07736 Chorismate mutase type I BaLi_c24940 PF01761 3-dehydroquinate synthase BaLi_c24950 PF01264 Chorismate synthase BaLi_c24960 PF01739 CheR methyltransferase, SAM binding domain BaLi_c24960 PF03705 CheR methyltransferase, all-alpha domain BaLi_c24970 PF00334 Nucleoside diphosphate kinase BaLi_c24980 PF00348 Polyprenyl synthetase BaLi_c24990 PF01209 ubiE/COQ5 methyltransferase family BaLi_c25000 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BaLi_c25010 PF02081 Tryptophan RNA-binding attenuator protein BaLi_c25020 PF01227 GTP cyclohydrolase I BaLi_c25030 PF00216 Bacterial DNA-binding protein BaLi_c25040 PF09547 Stage IV sporulation protein A (spore_IV_A) BaLi_c25060 PF10966 Protein of unknown function (DUF2768) BaLi_c25070 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BaLi_c25070 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BaLi_c25080 PF01926 50S ribosome-binding GTPase BaLi_c25080 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BaLi_c25100 PF14045 YIEGIA protein BaLi_c25120 PF14140 YpzI-like protein BaLi_c25130 PF01070 FMN-dependent dehydrogenase BaLi_c25140 PF00575 S1 RNA binding domain BaLi_c25150 PF02224 Cytidylate kinase BaLi_c25160 PF17313 Family of unknown function (DUF5359) BaLi_c25170 PF03413 Peptidase propeptide and YPEB domain BaLi_c25170 PF14620 YpeB sporulation BaLi_c25180 PF07486 Cell Wall Hydrolase BaLi_c25180 PF01471 Putative peptidoglycan binding domain BaLi_c25190 PF13367 PrsW family intramembrane metalloprotease BaLi_c25200 PF17763 Glutaminase/Asparaginase C-terminal domain BaLi_c25200 PF00710 Asparaginase, N-terminal BaLi_c25220 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BaLi_c25220 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BaLi_c25230 PF05389 Negative regulator of genetic competence (MecA) BaLi_c25240 PF00149 Calcineurin-like phosphoesterase BaLi_c25260 PF10864 Protein of unknown function (DUF2663) BaLi_c25270 PF01476 LysM domain BaLi_c25280 PF02517 CPBP intramembrane metalloprotease BaLi_c25290 PF00271 Helicase conserved C-terminal domain BaLi_c25290 PF00270 DEAD/DEAH box helicase BaLi_c25300 PF14493 Helix-turn-helix domain BaLi_c25320 PF12822 ECF transporter, substrate-specific component BaLi_c25330 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c25330 PF01842 ACT domain BaLi_c25330 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BaLi_c25340 PF04225 Opacity-associated protein A LysM-like domain BaLi_c25340 PF01551 Peptidase family M23 BaLi_c25360 PF08281 Sigma-70, region 4 BaLi_c25360 PF04542 Sigma-70 region 2 BaLi_c25380 PF01522 Polysaccharide deacetylase BaLi_c25400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c25400 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c25410 PF00486 Transcriptional regulatory protein, C terminal BaLi_c25410 PF00072 Response regulator receiver domain BaLi_c25420 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c25420 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c25420 PF00672 HAMP domain BaLi_c25420 PF00989 PAS fold BaLi_c25420 PF18698 Histidine kinase sensor domain BaLi_c25430 PF00486 Transcriptional regulatory protein, C terminal BaLi_c25430 PF00072 Response regulator receiver domain BaLi_c25440 PF01578 Cytochrome C assembly protein BaLi_c25450 PF05140 ResB-like family BaLi_c25460 PF00578 AhpC/TSA family BaLi_c25470 PF00849 RNA pseudouridylate synthase BaLi_c25470 PF01479 S4 domain BaLi_c25480 PF07670 Nucleoside recognition BaLi_c25490 PF07670 Nucleoside recognition BaLi_c25500 PF00768 D-alanyl-D-alanine carboxypeptidase BaLi_c25500 PF07943 Penicillin-binding protein 5, C-terminal domain BaLi_c25510 PF13047 Protein of unknown function (DUF3907) BaLi_c25520 PF04079 Segregation and condensation complex subunit ScpB BaLi_c25530 PF02616 Segregation and condensation protein ScpA BaLi_c25550 PF00583 Acetyltransferase (GNAT) family BaLi_c25560 PF00885 6,7-dimethyl-8-ribityllumazine synthase BaLi_c25570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BaLi_c25570 PF00925 GTP cyclohydrolase II BaLi_c25580 PF00677 Lumazine binding domain BaLi_c25590 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BaLi_c25590 PF01872 RibD C-terminal domain BaLi_c25610 PF00149 Calcineurin-like phosphoesterase BaLi_c25630 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c25640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BaLi_c25650 PF06207 Protein of unknown function (DUF1002) BaLi_c25660 PF05908 Poly-gamma-glutamate hydrolase BaLi_c25670 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain BaLi_c25670 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain BaLi_c25690 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c25700 PF14097 Stage V sporulation protein AE1 BaLi_c25710 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BaLi_c25720 PF07451 Stage V sporulation protein AD (SpoVAD) BaLi_c25730 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BaLi_c25740 PF13782 Stage V sporulation protein AB BaLi_c25750 PF12164 Stage V sporulation protein AA BaLi_c25760 PF04542 Sigma-70 region 2 BaLi_c25760 PF04545 Sigma-70, region 4 BaLi_c25760 PF04539 Sigma-70 region 3 BaLi_c25770 PF13581 Histidine kinase-like ATPase domain BaLi_c25780 PF01740 STAS domain BaLi_c25790 PF00768 D-alanyl-D-alanine carboxypeptidase BaLi_c25790 PF07943 Penicillin-binding protein 5, C-terminal domain BaLi_c25800 PF01048 Phosphorylase superfamily BaLi_c25810 PF01676 Metalloenzyme superfamily BaLi_c25820 PF02899 Phage integrase, N-terminal SAM-like domain BaLi_c25820 PF00589 Phage integrase family BaLi_c25830 PF01475 Ferric uptake regulator family BaLi_c25840 PF01944 Stage II sporulation protein M BaLi_c25850 PF02378 Phosphotransferase system, EIIC BaLi_c25860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c25870 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BaLi_c25890 PF13673 Acetyltransferase (GNAT) domain BaLi_c25910 PF00293 NUDIX domain BaLi_c25920 PF13072 Mother cell inhibitor of FtsZ BaLi_c25930 PF00440 Bacterial regulatory proteins, tetR family BaLi_c25940 PF13564 DoxX-like family BaLi_c25950 PF00248 Aldo/keto reductase family BaLi_c25970 PF12146 Serine aminopeptidase, S33 BaLi_c25980 PF10827 Protein of unknown function (DUF2552) BaLi_c25990 PF01521 Iron-sulphur cluster biosynthesis BaLi_c26010 PF13673 Acetyltransferase (GNAT) domain BaLi_c26010 PF04229 GrpB protein BaLi_c26020 PF03992 Antibiotic biosynthesis monooxygenase BaLi_c26030 PF01674 Lipase (class 2) BaLi_c26050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c26060 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c26070 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c26080 PF00005 ABC transporter BaLi_c26090 PF00005 ABC transporter BaLi_c26090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c26100 PF01554 MatE BaLi_c26120 PF08863 YolD-like protein BaLi_c26130 PF11798 IMS family HHH motif BaLi_c26130 PF11799 impB/mucB/samB family C-terminal domain BaLi_c26130 PF00817 impB/mucB/samB family BaLi_c26140 PF14164 YqzH-like protein BaLi_c26150 PF07690 Major Facilitator Superfamily BaLi_c26170 PF00485 Phosphoribulokinase / Uridine kinase family BaLi_c26190 PF00005 ABC transporter BaLi_c26210 PF01569 PAP2 superfamily BaLi_c26230 PF00005 ABC transporter BaLi_c26240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c26240 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c26250 PF00486 Transcriptional regulatory protein, C terminal BaLi_c26250 PF00072 Response regulator receiver domain BaLi_c26260 PF13193 AMP-binding enzyme C-terminal domain BaLi_c26260 PF00975 Thioesterase domain BaLi_c26260 PF00550 Phosphopantetheine attachment site BaLi_c26260 PF00668 Condensation domain BaLi_c26260 PF00501 AMP-binding enzyme BaLi_c26270 PF00550 Phosphopantetheine attachment site BaLi_c26270 PF18563 TubC N-terminal docking domain BaLi_c26270 PF00501 AMP-binding enzyme BaLi_c26270 PF00668 Condensation domain BaLi_c26270 PF13193 AMP-binding enzyme C-terminal domain BaLi_c26280 PF00668 Condensation domain BaLi_c26280 PF13193 AMP-binding enzyme C-terminal domain BaLi_c26280 PF00550 Phosphopantetheine attachment site BaLi_c26280 PF00501 AMP-binding enzyme BaLi_c26300 PF07690 Major Facilitator Superfamily BaLi_c26320 PF05908 Poly-gamma-glutamate hydrolase BaLi_c26330 PF00106 short chain dehydrogenase BaLi_c26340 PF00753 Metallo-beta-lactamase superfamily BaLi_c26350 PF03807 NADP oxidoreductase coenzyme F420-dependent BaLi_c26350 PF14748 Pyrroline-5-carboxylate reductase dimerisation BaLi_c26360 PF01546 Peptidase family M20/M25/M40 BaLi_c26370 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BaLi_c26380 PF12146 Serine aminopeptidase, S33 BaLi_c26390 PF00471 Ribosomal protein L33 BaLi_c26400 PF12706 Beta-lactamase superfamily domain BaLi_c26400 PF00753 Metallo-beta-lactamase superfamily BaLi_c26410 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BaLi_c26410 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BaLi_c26440 PF16868 NMT1-like family BaLi_c26450 PF07702 UTRA domain BaLi_c26450 PF00392 Bacterial regulatory proteins, gntR family BaLi_c26460 PF00232 Glycosyl hydrolase family 1 BaLi_c26470 PF02378 Phosphotransferase system, EIIC BaLi_c26480 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BaLi_c26490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c26500 PF00245 Alkaline phosphatase BaLi_c26520 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BaLi_c26520 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BaLi_c26530 PF11798 IMS family HHH motif BaLi_c26530 PF11799 impB/mucB/samB family C-terminal domain BaLi_c26530 PF00817 impB/mucB/samB family BaLi_c26550 PF02096 60Kd inner membrane protein BaLi_c26560 PF01546 Peptidase family M20/M25/M40 BaLi_c26560 PF07687 Peptidase dimerisation domain BaLi_c26570 PF01039 Carboxyl transferase domain BaLi_c26580 PF11728 Putative aromatic acid exporter C-terminal domain BaLi_c26580 PF06081 Aromatic acid exporter family member 1 BaLi_c26590 PF00005 ABC transporter BaLi_c26600 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c26610 PF00497 Bacterial extracellular solute-binding proteins, family 3 BaLi_c26620 PF06491 Disulphide isomerase BaLi_c26630 PF00781 Diacylglycerol kinase catalytic domain BaLi_c26640 PF00364 Biotin-requiring enzyme BaLi_c26640 PF02817 e3 binding domain BaLi_c26640 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BaLi_c26650 PF02780 Transketolase, C-terminal domain BaLi_c26650 PF02779 Transketolase, pyrimidine binding domain BaLi_c26660 PF00676 Dehydrogenase E1 component BaLi_c26670 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BaLi_c26670 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c26680 PF00871 Acetokinase family BaLi_c26690 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BaLi_c26690 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BaLi_c26700 PF01515 Phosphate acetyl/butaryl transferase BaLi_c26710 PF02954 Bacterial regulatory protein, Fis family BaLi_c26710 PF00989 PAS fold BaLi_c26710 PF00158 Sigma-54 interaction domain BaLi_c26720 PF11118 Protein of unknown function (DUF2627) BaLi_c26730 PF03009 Glycerophosphoryl diester phosphodiesterase family BaLi_c26740 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c26780 PF00072 Response regulator receiver domain BaLi_c26780 PF08769 Sporulation initiation factor Spo0A C terminal BaLi_c26790 PF05580 SpoIVB peptidase S55 BaLi_c26790 PF17820 PDZ domain BaLi_c26810 PF13476 AAA domain BaLi_c26820 PF01316 Arginine repressor, DNA binding domain BaLi_c26820 PF02863 Arginine repressor, C-terminal domain BaLi_c26830 PF01728 FtsJ-like methyltransferase BaLi_c26830 PF01479 S4 domain BaLi_c26840 PF02780 Transketolase, C-terminal domain BaLi_c26840 PF02779 Transketolase, pyrimidine binding domain BaLi_c26840 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BaLi_c26850 PF00348 Polyprenyl synthetase BaLi_c26860 PF02609 Exonuclease VII small subunit BaLi_c26870 PF02601 Exonuclease VII, large subunit BaLi_c26870 PF13742 OB-fold nucleic acid binding domain BaLi_c26880 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BaLi_c26880 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BaLi_c26890 PF01029 NusB family BaLi_c26900 PF03780 Asp23 family, cell envelope-related function BaLi_c26910 PF02785 Biotin carboxylase C-terminal domain BaLi_c26910 PF00289 Biotin carboxylase, N-terminal domain BaLi_c26910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BaLi_c26920 PF00364 Biotin-requiring enzyme BaLi_c26930 PF12685 SpoIIIAH-like protein BaLi_c26950 PF09581 Stage III sporulation protein AF (Spore_III_AF) BaLi_c26960 PF09546 Stage III sporulation protein AE (spore_III_AE) BaLi_c26970 PF06686 Stage III sporulation protein AC/AD protein family BaLi_c26980 PF06686 Stage III sporulation protein AC/AD protein family BaLi_c26990 PF09548 Stage III sporulation protein AB (spore_III_AB) BaLi_c27010 PF10942 Protein of unknown function (DUF2619) BaLi_c27020 PF08207 Elongation factor P (EF-P) KOW-like domain BaLi_c27020 PF09285 Elongation factor P, C-terminal BaLi_c27020 PF01132 Elongation factor P (EF-P) OB domain BaLi_c27030 PF00557 Metallopeptidase family M24 BaLi_c27030 PF01321 Creatinase/Prolidase N-terminal domain BaLi_c27040 PF01220 Dehydroquinase class II BaLi_c27050 PF11085 Conserved membrane protein YqhR BaLi_c27060 PF07136 Protein of unknown function (DUF1385) BaLi_c27080 PF01734 Patatin-like phospholipase BaLi_c27090 PF01325 Iron dependent repressor, N-terminal DNA binding domain BaLi_c27090 PF02742 Iron dependent repressor, metal binding and dimerisation domain BaLi_c27100 PF03099 Biotin/lipoate A/B protein ligase family BaLi_c27110 PF00581 Rhodanese-like domain BaLi_c27120 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BaLi_c27130 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c27140 PF00571 CBS domain BaLi_c27140 PF00005 ABC transporter BaLi_c27150 PF02347 Glycine cleavage system P-protein BaLi_c27160 PF02347 Glycine cleavage system P-protein BaLi_c27170 PF01571 Aminomethyltransferase folate-binding domain BaLi_c27170 PF08669 Glycine cleavage T-protein C-terminal barrel domain BaLi_c27180 PF00271 Helicase conserved C-terminal domain BaLi_c27180 PF00176 SNF2 family N-terminal domain BaLi_c27190 PF11079 Bacterial protein YqhG of unknown function BaLi_c27191 PF08671 Anti-repressor SinI BaLi_c27200 PF01381 Helix-turn-helix BaLi_c27200 PF08671 Anti-repressor SinI BaLi_c27210 PF12389 Camelysin metallo-endopeptidase BaLi_c27240 PF13028 Protein of unknown function (DUF3889) BaLi_c27241 PF14038 YqzE-like protein BaLi_c27260 PF15980 Putative Competence protein ComGF BaLi_c27270 PF07963 Prokaryotic N-terminal methylation motif BaLi_c27280 PF07963 Prokaryotic N-terminal methylation motif BaLi_c27290 PF00482 Type II secretion system (T2SS), protein F BaLi_c27300 PF00437 Type II/IV secretion system protein BaLi_c27310 PF01740 STAS domain BaLi_c27310 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain BaLi_c27330 PF03960 ArsC family BaLi_c27340 PF11117 Protein of unknown function (DUF2626) BaLi_c27350 PF00753 Metallo-beta-lactamase superfamily BaLi_c27360 PF10958 Protein of unknown function (DUF2759) BaLi_c27370 PF01910 Thiamine-binding protein BaLi_c27390 PF00246 Zinc carboxypeptidase BaLi_c27400 PF01497 Periplasmic binding protein BaLi_c27410 PF00884 Sulfatase BaLi_c27420 PF00480 ROK family BaLi_c27430 PF06014 Bacterial protein of unknown function (DUF910) BaLi_c27440 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c27450 PF01694 Rhomboid family BaLi_c27470 PF01812 5-formyltetrahydrofolate cyclo-ligase family BaLi_c27480 PF00471 Ribosomal protein L33 BaLi_c27490 PF00534 Glycosyl transferases group 1 BaLi_c27490 PF13439 Glycosyltransferase Family 4 BaLi_c27550 PF00005 ABC transporter BaLi_c27600 PF00005 ABC transporter BaLi_c27610 PF00005 ABC transporter BaLi_c27620 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c27630 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c27640 PF12849 PBP superfamily domain BaLi_c27660 PF07690 Major Facilitator Superfamily BaLi_c27670 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BaLi_c27670 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BaLi_c27680 PF04306 Protein of unknown function (DUF456) BaLi_c27690 PF06691 Protein of unknown function (DUF1189) BaLi_c27710 PF04551 GcpE protein BaLi_c27740 PF01475 Ferric uptake regulator family BaLi_c27750 PF00950 ABC 3 transport family BaLi_c27760 PF00005 ABC transporter BaLi_c27770 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c27770 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c27780 PF11116 Protein of unknown function (DUF2624) BaLi_c27790 PF01261 Xylose isomerase-like TIM barrel BaLi_c27800 PF00270 DEAD/DEAH box helicase BaLi_c27800 PF00271 Helicase conserved C-terminal domain BaLi_c27820 PF02401 LytB protein BaLi_c27830 PF01784 NIF3 (NGG1p interacting factor 3) BaLi_c27840 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BaLi_c27850 PF04493 Endonuclease V BaLi_c27890 PF04740 LXG domain of WXG superfamily BaLi_c27890 PF14431 YwqJ-like deaminase BaLi_c27890 PF14449 Pre-toxin TG BaLi_c27920 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BaLi_c27930 PF00140 Sigma-70 factor, region 1.2 BaLi_c27930 PF04542 Sigma-70 region 2 BaLi_c27930 PF03979 Sigma-70 factor, region 1.1 BaLi_c27930 PF04545 Sigma-70, region 4 BaLi_c27930 PF04539 Sigma-70 region 3 BaLi_c27940 PF08275 DNA primase catalytic core, N-terminal domain BaLi_c27940 PF01807 CHC2 zinc finger BaLi_c27940 PF10410 DnaB-helicase binding domain of primase BaLi_c27950 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BaLi_c27960 PF03618 Kinase/pyrophosphorylase BaLi_c27970 PF00571 CBS domain BaLi_c27970 PF08279 HTH domain BaLi_c27980 PF02092 Glycyl-tRNA synthetase beta subunit BaLi_c27990 PF02091 Glycyl-tRNA synthetase alpha subunit BaLi_c28000 PF11967 Recombination protein O N terminal BaLi_c28000 PF02565 Recombination protein O C terminal BaLi_c28010 PF14006 YqzL-like protein BaLi_c28020 PF01926 50S ribosome-binding GTPase BaLi_c28020 PF07650 KH domain BaLi_c28030 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BaLi_c28040 PF01219 Prokaryotic diacylglycerol kinase BaLi_c28050 PF02130 Uncharacterized protein family UPF0054 BaLi_c28060 PF07697 7TM-HD extracellular BaLi_c28060 PF07698 7TM receptor with intracellular HD hydrolase BaLi_c28060 PF01966 HD domain BaLi_c28070 PF02562 PhoH-like protein BaLi_c28080 PF06898 Putative stage IV sporulation protein YqfD BaLi_c28090 PF07873 YabP family BaLi_c28110 PF12127 SigmaW regulon antibacterial BaLi_c28120 PF01957 NfeD-like C-terminal, partner-binding BaLi_c28120 PF01972 Serine dehydrogenase proteinase BaLi_c28130 PF09424 Yqey-like protein BaLi_c28140 PF01165 Ribosomal protein S21 BaLi_c28150 PF02690 Na+/Pi-cotransporter BaLi_c28160 PF01791 DeoC/LacD family aldolase BaLi_c28170 PF04055 Radical SAM superfamily BaLi_c28170 PF01938 TRAM domain BaLi_c28170 PF00919 Uncharacterized protein family UPF0004 BaLi_c28180 PF04452 RNA methyltransferase BaLi_c28200 PF00684 DnaJ central domain BaLi_c28200 PF00226 DnaJ domain BaLi_c28200 PF01556 DnaJ C terminal domain BaLi_c28210 PF00012 Hsp70 protein BaLi_c28220 PF01025 GrpE BaLi_c28230 PF01628 HrcA protein C terminal domain BaLi_c28240 PF04055 Radical SAM superfamily BaLi_c28240 PF06969 HemN C-terminal domain BaLi_c28250 PF00679 Elongation factor G C-terminus BaLi_c28250 PF06421 GTP-binding protein LepA C-terminus BaLi_c28250 PF00009 Elongation factor Tu GTP binding domain BaLi_c28250 PF03144 Elongation factor Tu domain 2 BaLi_c28260 PF12438 Protein of unknown function (DUF3679) BaLi_c28270 PF07454 Stage II sporulation protein P (SpoIIP) BaLi_c28280 PF03418 Germination protease BaLi_c28290 PF01649 Ribosomal protein S20 BaLi_c28310 PF01638 HxlR-like helix-turn-helix BaLi_c28320 PF02525 Flavodoxin-like fold BaLi_c28330 PF06144 DNA polymerase III, delta subunit BaLi_c28340 PF14141 YqzM-like protein BaLi_c28350 PF00753 Metallo-beta-lactamase superfamily BaLi_c28350 PF13567 Domain of unknown function (DUF4131) BaLi_c28350 PF03772 Competence protein BaLi_c28360 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BaLi_c28370 PF10531 SLBB domain BaLi_c28380 PF14748 Pyrroline-5-carboxylate reductase dimerisation BaLi_c28380 PF03807 NADP oxidoreductase coenzyme F420-dependent BaLi_c28390 PF13649 Methyltransferase domain BaLi_c28410 PF01966 HD domain BaLi_c28420 PF01467 Cytidylyltransferase-like BaLi_c28430 PF01985 CRS1 / YhbY (CRM) domain BaLi_c28440 PF01488 Shikimate / quinate 5-dehydrogenase BaLi_c28440 PF18317 Shikimate 5'-dehydrogenase C-terminal domain BaLi_c28440 PF08501 Shikimate dehydrogenase substrate binding domain BaLi_c28450 PF01926 50S ribosome-binding GTPase BaLi_c28470 PF08970 Sporulation inhibitor A BaLi_c28480 PF00657 GDSL-like Lipase/Acylhydrolase BaLi_c28500 PF10057 Uncharacterized conserved protein (DUF2294) BaLi_c28510 PF00037 4Fe-4S binding domain BaLi_c28510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BaLi_c28510 PF00384 Molybdopterin oxidoreductase BaLi_c28510 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BaLi_c28510 PF01568 Molydopterin dinucleotide binding domain BaLi_c28520 PF07849 Protein of unknown function (DUF1641) BaLi_c28530 PF04545 Sigma-70, region 4 BaLi_c28530 PF04542 Sigma-70 region 2 BaLi_c28550 PF04545 Sigma-70, region 4 BaLi_c28550 PF04542 Sigma-70 region 2 BaLi_c28570 PF00381 PTS HPr component phosphorylation site BaLi_c28580 PF00232 Glycosyl hydrolase family 1 BaLi_c28590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BaLi_c28600 PF02378 Phosphotransferase system, EIIC BaLi_c28610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c28640 PF11975 Family 4 glycosyl hydrolase C-terminal domain BaLi_c28640 PF02056 Family 4 glycosyl hydrolase BaLi_c28650 PF01380 SIS domain BaLi_c28650 PF01418 Helix-turn-helix domain, rpiR family BaLi_c28670 PF13411 MerR HTH family regulatory protein BaLi_c28670 PF06445 GyrI-like small molecule binding domain BaLi_c28700 PF03737 Aldolase/RraA BaLi_c28710 PF04303 PrpF protein BaLi_c28730 PF02665 Nitrate reductase gamma subunit BaLi_c28740 PF02613 Nitrate reductase delta subunit BaLi_c28750 PF14711 Respiratory nitrate reductase beta C-terminal BaLi_c28750 PF13247 4Fe-4S dicluster domain BaLi_c28760 PF00384 Molybdopterin oxidoreductase BaLi_c28760 PF14710 Respiratory nitrate reductase alpha N-terminal BaLi_c28760 PF01568 Molydopterin dinucleotide binding domain BaLi_c28770 PF07690 Major Facilitator Superfamily BaLi_c28780 PF00042 Globin BaLi_c28780 PF00175 Oxidoreductase NAD-binding domain BaLi_c28780 PF00970 Oxidoreductase FAD-binding domain BaLi_c28800 PF13977 BetI-type transcriptional repressor, C-terminal BaLi_c28800 PF00440 Bacterial regulatory proteins, tetR family BaLi_c28840 PF00753 Metallo-beta-lactamase superfamily BaLi_c28860 PF00072 Response regulator receiver domain BaLi_c28860 PF00196 Bacterial regulatory proteins, luxR family BaLi_c28870 PF07730 Histidine kinase BaLi_c28870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c28880 PF00085 Thioredoxin BaLi_c28890 PF01925 Sulfite exporter TauE/SafE BaLi_c28900 PF01206 Sulfurtransferase TusA BaLi_c28910 PF00581 Rhodanese-like domain BaLi_c28910 PF00753 Metallo-beta-lactamase superfamily BaLi_c28920 PF01206 Sulfurtransferase TusA BaLi_c28920 PF00581 Rhodanese-like domain BaLi_c28930 PF13686 DsrE/DsrF/DrsH-like family BaLi_c28940 PF02583 Metal-sensitive transcriptional repressor BaLi_c28970 PF00398 Ribosomal RNA adenine dimethylase BaLi_c28980 PF14552 Tautomerase enzyme BaLi_c28990 PF01380 SIS domain BaLi_c29000 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BaLi_c29010 PF01638 HxlR-like helix-turn-helix BaLi_c29020 PF00487 Fatty acid desaturase BaLi_c29030 PF07730 Histidine kinase BaLi_c29040 PF00196 Bacterial regulatory proteins, luxR family BaLi_c29040 PF00072 Response regulator receiver domain BaLi_c29050 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c29060 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BaLi_c29070 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c29080 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c29090 PF00005 ABC transporter BaLi_c29090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c29100 PF00005 ABC transporter BaLi_c29100 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BaLi_c29130 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term BaLi_c29130 PF12833 Helix-turn-helix domain BaLi_c29140 PF00106 short chain dehydrogenase BaLi_c29170 PF00067 Cytochrome P450 BaLi_c29180 PF01925 Sulfite exporter TauE/SafE BaLi_c29190 PF04616 Glycosyl hydrolases family 43 BaLi_c29190 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain BaLi_c29220 PF00106 short chain dehydrogenase BaLi_c29230 PF08244 Glycosyl hydrolases family 32 C terminal BaLi_c29230 PF00251 Glycosyl hydrolases family 32 N-terminal domain BaLi_c29240 PF03613 PTS system mannose/fructose/sorbose family IID component BaLi_c29250 PF03609 PTS system sorbose-specific iic component BaLi_c29260 PF03830 PTS system sorbose subfamily IIB component BaLi_c29270 PF03610 PTS system fructose IIA component BaLi_c29280 PF00158 Sigma-54 interaction domain BaLi_c29280 PF00874 PRD domain BaLi_c29280 PF03610 PTS system fructose IIA component BaLi_c29300 PF00302 Chloramphenicol acetyltransferase BaLi_c29310 PF02805 Metal binding domain of Ada BaLi_c29310 PF12833 Helix-turn-helix domain BaLi_c29320 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BaLi_c29320 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BaLi_c29330 PF02702 Osmosensitive K+ channel His kinase sensor domain BaLi_c29340 PF02669 K+-transporting ATPase, c chain BaLi_c29370 PF00248 Aldo/keto reductase family BaLi_c29380 PF07690 Major Facilitator Superfamily BaLi_c29390 PF01638 HxlR-like helix-turn-helix BaLi_c29400 PF03575 Peptidase family S51 BaLi_c29410 PF02602 Uroporphyrinogen-III synthase HemD BaLi_c29430 PF01497 Periplasmic binding protein BaLi_c29440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c29440 PF03466 LysR substrate binding domain BaLi_c29450 PF07690 Major Facilitator Superfamily BaLi_c29470 PF00067 Cytochrome P450 BaLi_c29470 PF00667 FAD binding domain BaLi_c29470 PF00258 Flavodoxin BaLi_c29470 PF00175 Oxidoreductase NAD-binding domain BaLi_c29480 PF16295 Tetracyclin repressor-like, C-terminal domain BaLi_c29480 PF00440 Bacterial regulatory proteins, tetR family BaLi_c29490 PF17936 Bacterial Ig domain BaLi_c29490 PF00082 Subtilase family BaLi_c29500 PF08241 Methyltransferase domain BaLi_c29520 PF09501 Probable sporulation protein (Bac_small_yrzI) BaLi_c29530 PF14143 YrhC-like protein BaLi_c29540 PF01053 Cys/Met metabolism PLP-dependent enzyme BaLi_c29550 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c29560 PF01048 Phosphorylase superfamily BaLi_c29570 PF13649 Methyltransferase domain BaLi_c29580 PF10750 Protein of unknown function (DUF2536) BaLi_c29590 PF07423 Domain of unknown function (DUF1510) BaLi_c29600 PF03717 Penicillin-binding Protein dimerisation domain BaLi_c29600 PF00905 Penicillin binding protein transpeptidase domain BaLi_c29610 PF01272 Transcription elongation factor, GreA/GreB, C-term BaLi_c29610 PF03449 Transcription elongation factor, N-terminal BaLi_c29620 PF00485 Phosphoribulokinase / Uridine kinase family BaLi_c29660 PF02618 YceG-like family BaLi_c29670 PF06949 Protein of unknown function (DUF1292) BaLi_c29680 PF03652 Holliday junction resolvase BaLi_c29690 PF06135 IreB regulatory phosphoprotein BaLi_c29700 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BaLi_c29700 PF02272 DHHA1 domain BaLi_c29700 PF01411 tRNA synthetases class II (A) BaLi_c29710 PF01594 AI-2E family transporter BaLi_c29730 PF05239 PRC-barrel domain BaLi_c29740 PF13538 UvrD-like helicase C-terminal domain BaLi_c29740 PF14490 Helix-hairpin-helix containing domain BaLi_c29740 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BaLi_c29750 PF07719 Tetratricopeptide repeat BaLi_c29750 PF13181 Tetratricopeptide repeat BaLi_c29770 PF00266 Aminotransferase class-V BaLi_c29780 PF02082 Transcriptional regulator BaLi_c29790 PF05496 Holliday junction DNA helicase RuvB P-loop domain BaLi_c29790 PF12002 MgsA AAA+ ATPase C terminal BaLi_c29790 PF16193 AAA C-terminal domain BaLi_c29800 PF00899 ThiF family BaLi_c29810 PF01336 OB-fold nucleic acid binding domain BaLi_c29810 PF00152 tRNA synthetases class II (D, K and N) BaLi_c29810 PF02938 GAD domain BaLi_c29820 PF13393 Histidyl-tRNA synthetase BaLi_c29820 PF03129 Anticodon binding domain BaLi_c29830 PF08239 Bacterial SH3 domain BaLi_c29830 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c29840 PF02580 D-Tyr-tRNA(Tyr) deacylase BaLi_c29850 PF02824 TGS domain BaLi_c29850 PF04607 Region found in RelA / SpoT proteins BaLi_c29850 PF13291 ACT domain BaLi_c29860 PF00156 Phosphoribosyl transferase domain BaLi_c29870 PF01368 DHH family BaLi_c29870 PF02272 DHHA1 domain BaLi_c29870 PF17768 RecJ OB domain BaLi_c29870 PF10141 Single-strand DNA-specific exonuclease, C terminal domain BaLi_c29880 PF06305 Lipopolysaccharide assembly protein A domain BaLi_c29890 PF02355 Protein export membrane protein BaLi_c29890 PF07549 SecD/SecF GG Motif BaLi_c29900 PF13797 Post-transcriptional regulator BaLi_c29910 PF01943 Polysaccharide biosynthesis protein BaLi_c29910 PF14667 Polysaccharide biosynthesis C-terminal domain BaLi_c29920 PF04239 Protein of unknown function (DUF421) BaLi_c29930 PF12670 Protein of unknown function (DUF3792) BaLi_c29940 PF02699 Preprotein translocase subunit BaLi_c29950 PF01702 Queuine tRNA-ribosyltransferase BaLi_c29960 PF02547 Queuosine biosynthesis protein BaLi_c29970 PF11146 Protein of unknown function (DUF2905) BaLi_c29980 PF05496 Holliday junction DNA helicase RuvB P-loop domain BaLi_c29980 PF05491 RuvB C-terminal winged helix domain BaLi_c29980 PF17864 RuvB AAA lid domain BaLi_c29990 PF01330 RuvA N terminal domain BaLi_c29990 PF07499 RuvA, C-terminal domain BaLi_c30000 PF08955 BofC C-terminal domain BaLi_c30000 PF08977 Bypass of Forespore C, N terminal BaLi_c30020 PF08141 Small acid-soluble spore protein H family BaLi_c30030 PF05163 DinB family BaLi_c30040 PF05908 Poly-gamma-glutamate hydrolase BaLi_c30060 PF01709 Transcriptional regulator BaLi_c30070 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BaLi_c30080 PF01476 LysM domain BaLi_c30090 PF02445 Quinolinate synthetase A protein BaLi_c30100 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BaLi_c30100 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BaLi_c30110 PF00890 FAD binding domain BaLi_c30110 PF02910 Fumarate reductase flavoprotein C-term BaLi_c30120 PF00266 Aminotransferase class-V BaLi_c30130 PF08279 HTH domain BaLi_c30130 PF02829 3H domain BaLi_c30140 PF01842 ACT domain BaLi_c30140 PF00800 Prephenate dehydratase BaLi_c30150 PF01842 ACT domain BaLi_c30160 PF01926 50S ribosome-binding GTPase BaLi_c30160 PF01018 GTP1/OBG BaLi_c30160 PF09269 Domain of unknown function (DUF1967) BaLi_c30170 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BaLi_c30170 PF14682 Sporulation initiation phospho-transferase B, C-terminal BaLi_c30180 PF01016 Ribosomal L27 protein BaLi_c30190 PF04327 Cysteine protease Prp BaLi_c30200 PF00829 Ribosomal prokaryotic L21 protein BaLi_c30210 PF02163 Peptidase family M50 BaLi_c30220 PF01551 Peptidase family M23 BaLi_c30230 PF08327 Activator of Hsp90 ATPase homolog 1-like protein BaLi_c30240 PF01022 Bacterial regulatory protein, arsR family BaLi_c30250 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BaLi_c30260 PF03775 Septum formation inhibitor MinC, C-terminal domain BaLi_c30270 PF04093 rod shape-determining protein MreD BaLi_c30280 PF04085 rod shape-determining protein MreC BaLi_c30300 PF04002 RadC-like JAB domain BaLi_c30310 PF02545 Maf-like protein BaLi_c30320 PF05036 Sporulation related domain BaLi_c30330 PF06750 Bacterial Peptidase A24 N-terminal domain BaLi_c30330 PF01478 Type IV leader peptidase family BaLi_c30340 PF08245 Mur ligase middle domain BaLi_c30340 PF02875 Mur ligase family, glutamate ligase domain BaLi_c30350 PF08264 Anticodon-binding domain of tRNA BaLi_c30350 PF00133 tRNA synthetases class I (I, L, M and V) BaLi_c30350 PF10458 Valyl tRNA synthetase tRNA binding arm BaLi_c30380 PF01476 LysM domain BaLi_c30390 PF00202 Aminotransferase class-III BaLi_c30400 PF00490 Delta-aminolevulinic acid dehydratase BaLi_c30410 PF02602 Uroporphyrinogen-III synthase HemD BaLi_c30420 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BaLi_c30420 PF03900 Porphobilinogen deaminase, C-terminal domain BaLi_c30430 PF01578 Cytochrome C assembly protein BaLi_c30440 PF01488 Shikimate / quinate 5-dehydrogenase BaLi_c30440 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BaLi_c30440 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BaLi_c30460 PF01926 50S ribosome-binding GTPase BaLi_c30470 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c30470 PF02190 ATP-dependent protease La (LON) substrate-binding domain BaLi_c30470 PF05362 Lon protease (S16) C-terminal proteolytic domain BaLi_c30480 PF05362 Lon protease (S16) C-terminal proteolytic domain BaLi_c30480 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c30490 PF07724 AAA domain (Cdc48 subfamily) BaLi_c30490 PF10431 C-terminal, D2-small domain, of ClpB protein BaLi_c30490 PF06689 ClpX C4-type zinc finger BaLi_c30500 PF05697 Bacterial trigger factor protein (TF) BaLi_c30500 PF05698 Bacterial trigger factor protein (TF) C-terminus BaLi_c30500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BaLi_c30520 PF00694 Aconitase C-terminal domain BaLi_c30530 PF00330 Aconitase family (aconitate hydratase) BaLi_c30540 PF00180 Isocitrate/isopropylmalate dehydrogenase BaLi_c30550 PF08502 LeuA allosteric (dimerisation) domain BaLi_c30550 PF00682 HMGL-like BaLi_c30560 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BaLi_c30560 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BaLi_c30570 PF01842 ACT domain BaLi_c30570 PF10369 Small subunit of acetolactate synthase BaLi_c30580 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BaLi_c30580 PF00205 Thiamine pyrophosphate enzyme, central domain BaLi_c30580 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BaLi_c30590 PF01063 Amino-transferase class IV BaLi_c30610 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BaLi_c30610 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BaLi_c30650 PF12850 Calcineurin-like phosphoesterase superfamily domain BaLi_c30660 PF01725 Ham1 family BaLi_c30670 PF03725 3' exoribonuclease family, domain 2 BaLi_c30670 PF01138 3' exoribonuclease family, domain 1 BaLi_c30680 PF10646 Sporulation and spore germination BaLi_c30690 PF01177 Asp/Glu/Hydantoin racemase BaLi_c30700 PF01047 MarR family BaLi_c30710 PF00196 Bacterial regulatory proteins, luxR family BaLi_c30720 PF00106 short chain dehydrogenase BaLi_c30730 PF03061 Thioesterase superfamily BaLi_c30740 PF13085 2Fe-2S iron-sulfur cluster binding domain BaLi_c30740 PF13183 4Fe-4S dicluster domain BaLi_c30750 PF02910 Fumarate reductase flavoprotein C-term BaLi_c30750 PF00890 FAD binding domain BaLi_c30760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BaLi_c30770 PF10702 Protein of unknown function (DUF2507) BaLi_c30780 PF13840 ACT domain BaLi_c30780 PF00696 Amino acid kinase family BaLi_c30780 PF01842 ACT domain BaLi_c30790 PF02151 UvrB/uvrC motif BaLi_c30790 PF08459 UvrC Helix-hairpin-helix N-terminal BaLi_c30790 PF01541 GIY-YIG catalytic domain BaLi_c30800 PF00085 Thioredoxin BaLi_c30810 PF01012 Electron transfer flavoprotein domain BaLi_c30810 PF00766 Electron transfer flavoprotein FAD-binding domain BaLi_c30820 PF01012 Electron transfer flavoprotein domain BaLi_c30830 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c30840 PF00440 Bacterial regulatory proteins, tetR family BaLi_c30840 PF08359 YsiA-like protein, C-terminal region BaLi_c30850 PF13193 AMP-binding enzyme C-terminal domain BaLi_c30850 PF00501 AMP-binding enzyme BaLi_c30860 PF03994 Domain of Unknown Function (DUF350) BaLi_c30870 PF01713 Smr domain BaLi_c30870 PF00488 MutS domain V BaLi_c30880 PF02811 PHP domain BaLi_c30880 PF14791 DNA polymerase beta thumb BaLi_c30880 PF14716 Helix-hairpin-helix domain BaLi_c30890 PF02674 Colicin V production protein BaLi_c30900 PF05164 Cell division protein ZapA BaLi_c30910 PF01351 Ribonuclease HII BaLi_c30910 PF11858 Domain of unknown function (DUF3378) BaLi_c30940 PF03484 tRNA synthetase B5 domain BaLi_c30940 PF01588 Putative tRNA binding domain BaLi_c30940 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain BaLi_c30940 PF03483 B3/4 domain BaLi_c30940 PF03147 Ferredoxin-fold anticodon binding domain BaLi_c30950 PF01409 tRNA synthetases class II core domain (F) BaLi_c30950 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BaLi_c30960 PF08032 RNA 2'-O ribose methyltransferase substrate binding BaLi_c30960 PF00588 SpoU rRNA Methylase family BaLi_c30970 PF13722 5TM C-terminal transporter carbon starvation CstA BaLi_c30970 PF02554 Carbon starvation protein CstA BaLi_c30980 PF00440 Bacterial regulatory proteins, tetR family BaLi_c30980 PF13977 BetI-type transcriptional repressor, C-terminal BaLi_c30990 PF03703 Bacterial PH domain BaLi_c31020 PF06964 Alpha-L-arabinofuranosidase C-terminal domain BaLi_c31030 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c31040 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c31050 PF01547 Bacterial extracellular solute-binding protein BaLi_c31060 PF13685 Iron-containing alcohol dehydrogenase BaLi_c31070 PF00596 Class II Aldolase and Adducin N-terminal domain BaLi_c31080 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BaLi_c31080 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BaLi_c31090 PF11762 L-arabinose isomerase C-terminal domain BaLi_c31090 PF02610 L-arabinose isomerase BaLi_c31100 PF04616 Glycosyl hydrolases family 43 BaLi_c31110 PF05343 M42 glutamyl aminopeptidase BaLi_c31130 PF06961 Protein of unknown function (DUF1294) BaLi_c31140 PF00453 Ribosomal protein L20 BaLi_c31150 PF01632 Ribosomal protein L35 BaLi_c31160 PF05198 Translation initiation factor IF-3, N-terminal domain BaLi_c31160 PF00707 Translation initiation factor IF-3, C-terminal domain BaLi_c31170 PF04172 LrgB-like family BaLi_c31180 PF03788 LrgA family BaLi_c31190 PF09423 PhoD-like phosphatase BaLi_c31190 PF16655 PhoD-like phosphatase, N-terminal domain BaLi_c31200 PF04397 LytTr DNA-binding domain BaLi_c31200 PF00072 Response regulator receiver domain BaLi_c31210 PF07694 5TMR of 5TMR-LYT BaLi_c31210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c31210 PF06580 Histidine kinase BaLi_c31240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BaLi_c31240 PF02824 TGS domain BaLi_c31240 PF03129 Anticodon binding domain BaLi_c31240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BaLi_c31250 PF08812 YtxC-like family BaLi_c31260 PF09335 SNARE associated Golgi protein BaLi_c31270 PF01695 IstB-like ATP binding protein BaLi_c31270 PF07319 Primosomal protein DnaI N-terminus BaLi_c31280 PF07261 Replication initiation and membrane attachment BaLi_c31290 PF03477 ATP cone domain BaLi_c31310 PF02675 S-adenosylmethionine decarboxylase BaLi_c31320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BaLi_c31320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BaLi_c31330 PF00544 Pectate lyase BaLi_c31340 PF01121 Dephospho-CoA kinase BaLi_c31350 PF02659 Putative manganese efflux pump BaLi_c31360 PF06827 Zinc finger found in FPG and IleRS BaLi_c31360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BaLi_c31360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BaLi_c31370 PF01367 5'-3' exonuclease, C-terminal SAM fold BaLi_c31370 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BaLi_c31370 PF00476 DNA polymerase family A BaLi_c31380 PF00989 PAS fold BaLi_c31380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c31380 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c31380 PF16736 Single Cache-like BaLi_c31400 PF00486 Transcriptional regulatory protein, C terminal BaLi_c31400 PF00072 Response regulator receiver domain BaLi_c31410 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BaLi_c31410 PF00056 lactate/malate dehydrogenase, NAD binding domain BaLi_c31420 PF00180 Isocitrate/isopropylmalate dehydrogenase BaLi_c31430 PF00285 Citrate synthase, C-terminal domain BaLi_c31440 PF00722 Glycosyl hydrolases family 16 BaLi_c31450 PF04284 Protein of unknown function (DUF441) BaLi_c31460 PF01594 AI-2E family transporter BaLi_c31470 PF04186 FxsA cytoplasmic membrane protein BaLi_c31480 PF00391 PEP-utilising enzyme, mobile domain BaLi_c31480 PF00224 Pyruvate kinase, barrel domain BaLi_c31480 PF02887 Pyruvate kinase, alpha/beta domain BaLi_c31490 PF00365 Phosphofructokinase BaLi_c31500 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BaLi_c31510 PF17848 Acetyl-coA carboxylase zinc finger domain BaLi_c31510 PF01039 Carboxyl transferase domain BaLi_c31520 PF03949 Malic enzyme, NAD binding domain BaLi_c31520 PF00390 Malic enzyme, N-terminal domain BaLi_c31530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BaLi_c31530 PF02811 PHP domain BaLi_c31530 PF14579 Helix-hairpin-helix motif BaLi_c31530 PF01336 OB-fold nucleic acid binding domain BaLi_c31530 PF07733 Bacterial DNA polymerase III alpha NTPase domain BaLi_c31540 PF14034 Sporulation protein YtrH BaLi_c31570 PF02272 DHHA1 domain BaLi_c31570 PF01368 DHH family BaLi_c31580 PF14007 YtpI-like protein BaLi_c31590 PF03061 Thioesterase superfamily BaLi_c31590 PF00392 Bacterial regulatory proteins, gntR family BaLi_c31590 PF07085 DRTGG domain BaLi_c31590 PF00571 CBS domain BaLi_c31600 PF10400 Virulence activator alpha C-term BaLi_c31600 PF03551 Transcriptional regulator PadR-like family BaLi_c31640 PF14698 Argininosuccinate lyase C-terminal BaLi_c31640 PF00206 Lyase BaLi_c31650 PF00764 Arginosuccinate synthase BaLi_c31660 PF00994 Probable molybdopterin binding domain BaLi_c31670 PF00871 Acetokinase family BaLi_c31680 PF02384 N-6 DNA Methylase BaLi_c31690 PF08534 Redoxin BaLi_c31700 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BaLi_c31710 PF11167 Protein of unknown function (DUF2953) BaLi_c31720 PF06271 RDD family BaLi_c31730 PF01343 Peptidase family S49 BaLi_c31740 PF01513 ATP-NAD kinase BaLi_c31750 PF01047 MarR family BaLi_c31760 PF13193 AMP-binding enzyme C-terminal domain BaLi_c31760 PF00501 AMP-binding enzyme BaLi_c31770 PF00269 Small, acid-soluble spore proteins, alpha/beta type BaLi_c31780 PF02568 Thiamine biosynthesis protein (ThiI) BaLi_c31780 PF02926 THUMP domain BaLi_c31790 PF00266 Aminotransferase class-V BaLi_c31800 PF05525 Branched-chain amino acid transport protein BaLi_c31810 PF06160 Septation ring formation regulator, EzrA BaLi_c31820 PF02811 PHP domain BaLi_c31830 PF00440 Bacterial regulatory proteins, tetR family BaLi_c31840 PF13185 GAF domain BaLi_c31850 PF00990 Diguanylate cyclase, GGDEF domain BaLi_c31860 PF01479 S4 domain BaLi_c31860 PF00163 Ribosomal protein S4/S9 N-terminal domain BaLi_c31880 PF00579 tRNA synthetases class I (W and Y) BaLi_c31880 PF01479 S4 domain BaLi_c31890 PF00501 AMP-binding enzyme BaLi_c31890 PF13193 AMP-binding enzyme C-terminal domain BaLi_c31900 PF00583 Acetyltransferase (GNAT) family BaLi_c31910 PF00571 CBS domain BaLi_c31920 PF00850 Histone deacetylase domain BaLi_c31930 PF13677 Membrane MotB of proton-channel complex MotA/MotB BaLi_c31930 PF00691 OmpA family BaLi_c31940 PF01618 MotA/TolQ/ExbB proton channel family BaLi_c31950 PF00356 Bacterial regulatory proteins, lacI family BaLi_c31960 PF00793 DAHP synthetase I family BaLi_c31960 PF01817 Chorismate mutase type II BaLi_c31980 PF11009 Protein of unknown function (DUF2847) BaLi_c31990 PF12732 YtxH-like protein BaLi_c32000 PF06103 Bacterial protein of unknown function (DUF948) BaLi_c32010 PF08245 Mur ligase middle domain BaLi_c32010 PF02875 Mur ligase family, glutamate ligase domain BaLi_c32010 PF01225 Mur ligase family, catalytic domain BaLi_c32020 PF01580 FtsK/SpoIIIE family BaLi_c32020 PF09397 Ftsk gamma domain BaLi_c32020 PF17854 FtsK alpha domain BaLi_c32030 PF01588 Putative tRNA binding domain BaLi_c32030 PF14794 Domain of unknown function (DUF4479) BaLi_c32040 PF07285 Protein of unknown function (DUF1444) BaLi_c32050 PF00085 Thioredoxin BaLi_c32060 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BaLi_c32070 PF05343 M42 glutamyl aminopeptidase BaLi_c32080 PF03413 Peptidase propeptide and YPEB domain BaLi_c32090 PF03949 Malic enzyme, NAD binding domain BaLi_c32090 PF00390 Malic enzyme, N-terminal domain BaLi_c32100 PF00753 Metallo-beta-lactamase superfamily BaLi_c32110 PF02390 Putative methyltransferase BaLi_c32120 PF14165 YtzH-like protein BaLi_c32130 PF01636 Phosphotransferase enzyme family BaLi_c32140 PF17999 Pullulanase N1-terminal domain BaLi_c32140 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BaLi_c32140 PF00128 Alpha amylase, catalytic domain BaLi_c32150 PF00781 Diacylglycerol kinase catalytic domain BaLi_c32180 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c32200 PF10903 Protein of unknown function (DUF2691) BaLi_c32210 PF01546 Peptidase family M20/M25/M40 BaLi_c32220 PF00860 Permease family BaLi_c32230 PF05975 Bacterial ABC transporter protein EcsB BaLi_c32240 PF00005 ABC transporter BaLi_c32250 PF08220 DeoR-like helix-turn-helix domain BaLi_c32260 PF00849 RNA pseudouridylate synthase BaLi_c32260 PF01479 S4 domain BaLi_c32270 PF01943 Polysaccharide biosynthesis protein BaLi_c32270 PF14667 Polysaccharide biosynthesis C-terminal domain BaLi_c32290 PF02028 BCCT, betaine/carnitine/choline family transporter BaLi_c32300 PF10957 Sporulation protein Cse60 BaLi_c32310 PF00581 Rhodanese-like domain BaLi_c32320 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c32340 PF04854 Protein of unknown function, DUF624 BaLi_c32350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c32350 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c32370 PF07470 Glycosyl Hydrolase Family 88 BaLi_c32380 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c32390 PF17853 GGDEF-like domain BaLi_c32390 PF12833 Helix-turn-helix domain BaLi_c32400 PF13416 Bacterial extracellular solute-binding protein BaLi_c32410 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c32420 PF01370 NAD dependent epimerase/dehydratase family BaLi_c32430 PF01738 Dienelactone hydrolase family BaLi_c32450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c32450 PF03466 LysR substrate binding domain BaLi_c32460 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c32470 PF09334 tRNA synthetases class I (M) BaLi_c32470 PF00133 tRNA synthetases class I (I, L, M and V) BaLi_c32470 PF08264 Anticodon-binding domain of tRNA BaLi_c32470 PF13603 Leucyl-tRNA synthetase, Domain 2 BaLi_c32480 PF14074 Protein of unknown function (DUF4257) BaLi_c32490 PF07690 Major Facilitator Superfamily BaLi_c32500 PF03180 NLPA lipoprotein BaLi_c32510 PF04791 LMBR1-like membrane protein BaLi_c32520 PF12704 MacB-like periplasmic core domain BaLi_c32520 PF02687 FtsX-like permease family BaLi_c32530 PF00005 ABC transporter BaLi_c32550 PF00005 ABC transporter BaLi_c32560 PF00392 Bacterial regulatory proteins, gntR family BaLi_c32580 PF10732 Protein of unknown function (DUF2524) BaLi_c32590 PF16199 Radical_SAM C-terminal domain BaLi_c32590 PF04055 Radical SAM superfamily BaLi_c32600 PF06962 Putative rRNA methylase BaLi_c32610 PF10776 Protein of unknown function (DUF2600) BaLi_c32620 PF12146 Serine aminopeptidase, S33 BaLi_c32630 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c32640 PF01569 PAP2 superfamily BaLi_c32650 PF00534 Glycosyl transferases group 1 BaLi_c32650 PF13439 Glycosyltransferase Family 4 BaLi_c32660 PF00733 Asparagine synthase BaLi_c32660 PF13537 Glutamine amidotransferase domain BaLi_c32670 PF02773 S-adenosylmethionine synthetase, C-terminal domain BaLi_c32670 PF00438 S-adenosylmethionine synthetase, N-terminal domain BaLi_c32670 PF02772 S-adenosylmethionine synthetase, central domain BaLi_c32680 PF01293 Phosphoenolpyruvate carboxykinase BaLi_c32700 PF10763 Protein of unknown function (DUF2584) BaLi_c32710 PF00326 Prolyl oligopeptidase family BaLi_c32730 PF00005 ABC transporter BaLi_c32740 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c32750 PF00293 NUDIX domain BaLi_c32770 PF05105 Bacteriophage holin family BaLi_c32780 PF00210 Ferritin-like domain BaLi_c32800 PF13115 YtkA-like BaLi_c32810 PF02664 S-Ribosylhomocysteinase (LuxS) BaLi_c32820 PF01809 Putative membrane protein insertion efficiency factor BaLi_c32830 PF00484 Carbonic anhydrase BaLi_c32840 PF02492 CobW/HypB/UreG, nucleotide-binding domain BaLi_c32840 PF07683 Cobalamin synthesis protein cobW C-terminal domain BaLi_c32850 PF01297 Zinc-uptake complex component A periplasmic BaLi_c32870 PF01197 Ribosomal protein L31 BaLi_c32880 PF01654 Cytochrome bd terminal oxidase subunit I BaLi_c32890 PF02322 Cytochrome bd terminal oxidase subunit II BaLi_c32900 PF07561 Domain of Unknown Function (DUF1540) BaLi_c32920 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BaLi_c32920 PF13378 Enolase C-terminal domain-like BaLi_c32930 PF00501 AMP-binding enzyme BaLi_c32930 PF13193 AMP-binding enzyme C-terminal domain BaLi_c32940 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c32950 PF00561 alpha/beta hydrolase fold BaLi_c32960 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BaLi_c32960 PF16582 Middle domain of thiamine pyrophosphate BaLi_c32960 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BaLi_c32970 PF00425 chorismate binding enzyme BaLi_c32980 PF01040 UbiA prenyltransferase family BaLi_c32990 PF01258 Prokaryotic dksA/traR C4-type zinc finger BaLi_c33000 PF00343 Carbohydrate phosphorylase BaLi_c33010 PF08323 Starch synthase catalytic domain BaLi_c33010 PF00534 Glycosyl transferases group 1 BaLi_c33020 PF00483 Nucleotidyl transferase BaLi_c33030 PF00483 Nucleotidyl transferase BaLi_c33040 PF02806 Alpha amylase, C-terminal all-beta domain BaLi_c33040 PF00128 Alpha amylase, catalytic domain BaLi_c33040 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BaLi_c33280 PF00392 Bacterial regulatory proteins, gntR family BaLi_c33290 PF09515 Thiamine transporter protein (Thia_YuaJ) BaLi_c33300 PF04203 Sortase domain BaLi_c33320 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c33330 PF01470 Pyroglutamyl peptidase BaLi_c33340 PF02080 TrkA-C domain BaLi_c33340 PF02254 TrkA-N domain BaLi_c33380 PF12867 DinB superfamily BaLi_c33400 PF00465 Iron-containing alcohol dehydrogenase BaLi_c33440 PF04072 Leucine carboxyl methyltransferase BaLi_c33450 PF00842 Alanine racemase, C-terminal domain BaLi_c33450 PF01168 Alanine racemase, N-terminal domain BaLi_c33460 PF00190 Cupin BaLi_c33480 PF03747 ADP-ribosylglycohydrolase BaLi_c33620 PF13332 Hemagglutinin repeat BaLi_c33620 PF05860 haemagglutination activity domain BaLi_c33620 PF04829 Pre-toxin domain with VENN motif BaLi_c33690 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BaLi_c33710 PF00149 Calcineurin-like phosphoesterase BaLi_c33720 PF02673 Bacitracin resistance protein BacA BaLi_c33730 PF01594 AI-2E family transporter BaLi_c33740 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c33740 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c33750 PF01965 DJ-1/PfpI family BaLi_c33760 PF02743 Cache domain BaLi_c33760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c33760 PF00672 HAMP domain BaLi_c33770 PF02743 Cache domain BaLi_c33770 PF00672 HAMP domain BaLi_c33770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c33780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c33780 PF00672 HAMP domain BaLi_c33780 PF02743 Cache domain BaLi_c33800 PF03060 Nitronate monooxygenase BaLi_c33810 PF01894 Uncharacterised protein family UPF0047 BaLi_c33820 PF16657 Maltogenic Amylase, C-terminal domain BaLi_c33820 PF00128 Alpha amylase, catalytic domain BaLi_c33850 PF01670 Glycosyl hydrolase family 12 BaLi_c33860 PF01595 Cyclin M transmembrane N-terminal domain BaLi_c33860 PF03471 Transporter associated domain BaLi_c33860 PF00571 CBS domain BaLi_c33870 PF04298 Putative neutral zinc metallopeptidase BaLi_c33880 PF11458 Membrane-integrating protein Mistic BaLi_c33890 PF02254 TrkA-N domain BaLi_c33890 PF07885 Ion channel BaLi_c33900 PF08868 YugN-like family BaLi_c33910 PF04239 Protein of unknown function (DUF421) BaLi_c33920 PF03073 TspO/MBR family BaLi_c33930 PF13302 Acetyltransferase (GNAT) domain BaLi_c33940 PF00342 Phosphoglucose isomerase BaLi_c33950 PF00465 Iron-containing alcohol dehydrogenase BaLi_c33960 PF04070 Domain of unknown function (DUF378) BaLi_c33970 PF00575 S1 RNA binding domain BaLi_c33980 PF00155 Aminotransferase class I and II BaLi_c33990 PF01037 Lrp/AsnC ligand binding domain BaLi_c34000 PF00561 alpha/beta hydrolase fold BaLi_c34000 PF08386 TAP-like protein BaLi_c34010 PF08958 Domain of unknown function (DUF1871) BaLi_c34030 PF00155 Aminotransferase class I and II BaLi_c34050 PF08810 Kinase associated protein B BaLi_c34060 PF00929 Exonuclease BaLi_c34070 PF07690 Major Facilitator Superfamily BaLi_c34080 PF00905 Penicillin binding protein transpeptidase domain BaLi_c34080 PF00912 Transglycosylase BaLi_c34090 PF04134 Protein of unknown function, DUF393 BaLi_c34100 PF17328 Family of unknown function (DUF5366) BaLi_c34110 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BaLi_c34110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c34110 PF17203 Single cache domain 3 BaLi_c34110 PF00989 PAS fold BaLi_c34120 PF00072 Response regulator receiver domain BaLi_c34130 PF01066 CDP-alcohol phosphatidyltransferase BaLi_c34140 PF09335 SNARE associated Golgi protein BaLi_c34150 PF02666 Phosphatidylserine decarboxylase BaLi_c34160 PF03390 2-hydroxycarboxylate transporter family BaLi_c34170 PF13244 Domain of unknown function (DUF4040) BaLi_c34170 PF00361 Proton-conducting membrane transporter BaLi_c34170 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BaLi_c34180 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BaLi_c34190 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BaLi_c34200 PF00361 Proton-conducting membrane transporter BaLi_c34210 PF01899 Na+/H+ ion antiporter subunit BaLi_c34220 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BaLi_c34230 PF03334 Na+/H+ antiporter subunit BaLi_c34240 PF03061 Thioesterase superfamily BaLi_c34250 PF00072 Response regulator receiver domain BaLi_c34250 PF00196 Bacterial regulatory proteins, luxR family BaLi_c34260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c34260 PF07730 Histidine kinase BaLi_c34290 PF08181 DegQ (SacQ) family BaLi_c34310 PF08668 HDOD domain BaLi_c34310 PF00563 EAL domain BaLi_c34320 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BaLi_c34320 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BaLi_c34320 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BaLi_c34330 PF00857 Isochorismatase family BaLi_c34340 PF07997 Protein of unknown function (DUF1694) BaLi_c34350 PF14166 YueH-like protein BaLi_c34370 PF01594 AI-2E family transporter BaLi_c34380 PF02082 Transcriptional regulator BaLi_c34390 PF00331 Glycosyl hydrolase family 10 BaLi_c34390 PF07859 alpha/beta hydrolase fold BaLi_c34410 PF01966 HD domain BaLi_c34420 PF00106 short chain dehydrogenase BaLi_c34440 PF17355 Family of unknown function (DUF5383) BaLi_c34460 PF12538 DNA transporter BaLi_c34460 PF01580 FtsK/SpoIIIE family BaLi_c34470 PF10140 WXG100 protein secretion system (Wss), protein YukC BaLi_c34480 PF08817 WXG100 protein secretion system (Wss), protein YukD BaLi_c34490 PF06013 Proteins of 100 residues with WXG BaLi_c34500 PF01235 Sodium:alanine symporter family BaLi_c34510 PF06018 CodY GAF-like domain BaLi_c34510 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c34510 PF17853 GGDEF-like domain BaLi_c34520 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BaLi_c34520 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BaLi_c34530 PF00174 Oxidoreductase molybdopterin binding domain BaLi_c34540 PF02632 BioY family BaLi_c34550 PF13726 Na+-H+ antiporter family BaLi_c34550 PF03553 Na+/H+ antiporter family BaLi_c34560 PF02789 Cytosol aminopeptidase family, N-terminal domain BaLi_c34560 PF00883 Cytosol aminopeptidase family, catalytic domain BaLi_c34570 PF02681 Divergent PAP2 family BaLi_c34580 PF06725 3D domain BaLi_c34590 PF14068 Putative membrane protein BaLi_c34600 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c34610 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c34630 PF14169 Cold-inducible protein YdjO BaLi_c34640 PF00583 Acetyltransferase (GNAT) family BaLi_c34650 PF01521 Iron-sulphur cluster biosynthesis BaLi_c34660 PF01678 Diaminopimelate epimerase BaLi_c34670 PF01773 Na+ dependent nucleoside transporter N-terminus BaLi_c34670 PF07662 Na+ dependent nucleoside transporter C-terminus BaLi_c34680 PF07293 Protein of unknown function (DUF1450) BaLi_c34690 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c34700 PF04239 Protein of unknown function (DUF421) BaLi_c34710 PF02915 Rubrerythrin BaLi_c34720 PF08818 Domain of unknown function (DU1801) BaLi_c34740 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c34750 PF05870 Phenolic acid decarboxylase (PAD) BaLi_c34770 PF07315 Protein of unknown function (DUF1462) BaLi_c34780 PF01106 NifU-like domain BaLi_c34790 PF07676 WD40-like Beta Propeller Repeat BaLi_c34790 PF00326 Prolyl oligopeptidase family BaLi_c34800 PF00288 GHMP kinases N terminal domain BaLi_c34800 PF08544 GHMP kinases C terminal BaLi_c34810 PF00291 Pyridoxal-phosphate dependent enzyme BaLi_c34820 PF01842 ACT domain BaLi_c34820 PF00742 Homoserine dehydrogenase BaLi_c34820 PF03447 Homoserine dehydrogenase, NAD binding domain BaLi_c34830 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BaLi_c34830 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c34850 PF04608 Phosphatidylglycerophosphatase A BaLi_c34860 PF13344 Haloacid dehalogenase-like hydrolase BaLi_c34870 PF01934 Protein of unknown function DUF86 BaLi_c34880 PF06265 Protein of unknown function (DUF1027) BaLi_c34890 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BaLi_c34900 PF04055 Radical SAM superfamily BaLi_c34900 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BaLi_c34910 PF01551 Peptidase family M23 BaLi_c34920 PF00209 Sodium:neurotransmitter symporter family BaLi_c34930 PF09560 Sporulation protein YunB (Spo_YunB) BaLi_c34940 PF08827 Domain of unknown function (DUF1805) BaLi_c34950 PF02872 5'-nucleotidase, C-terminal domain BaLi_c34960 PF01925 Sulfite exporter TauE/SafE BaLi_c34970 PF01904 Protein of unknown function DUF72 BaLi_c34990 PF13977 BetI-type transcriptional repressor, C-terminal BaLi_c34990 PF00440 Bacterial regulatory proteins, tetR family BaLi_c35000 PF00266 Aminotransferase class-V BaLi_c35010 PF07905 Purine catabolism regulatory protein-like family BaLi_c35010 PF17853 GGDEF-like domain BaLi_c35010 PF13556 PucR C-terminal helix-turn-helix domain BaLi_c35020 PF07690 Major Facilitator Superfamily BaLi_c35030 PF03606 C4-dicarboxylate anaerobic carrier BaLi_c35040 PF02885 Glycosyl transferase family, helical bundle domain BaLi_c35040 PF00591 Glycosyl transferase family, a/b domain BaLi_c35050 PF04231 Endonuclease I BaLi_c35070 PF01266 FAD dependent oxidoreductase BaLi_c35100 PF18801 response regulator aspartate phosphatase H, N terminal BaLi_c35110 PF01458 Uncharacterized protein family (UPF0051) BaLi_c35120 PF01592 NifU-like N terminal domain BaLi_c35130 PF00266 Aminotransferase class-V BaLi_c35140 PF01458 Uncharacterized protein family (UPF0051) BaLi_c35150 PF00005 ABC transporter BaLi_c35160 PF16916 Dimerisation domain of Zinc Transporter BaLi_c35160 PF01545 Cation efflux family BaLi_c35180 PF02627 Carboxymuconolactone decarboxylase family BaLi_c35190 PF03180 NLPA lipoprotein BaLi_c35200 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c35210 PF00005 ABC transporter BaLi_c35210 PF09383 NIL domain BaLi_c35220 PF02036 SCP-2 sterol transfer family BaLi_c35230 PF00085 Thioredoxin BaLi_c35240 PF01751 Toprim domain BaLi_c35250 PF10830 Protein of unknown function (DUF2553) BaLi_c35260 PF01597 Glycine cleavage H-protein BaLi_c35270 PF03960 ArsC family BaLi_c35280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c35280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c35280 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c35290 PF00108 Thiolase, N-terminal domain BaLi_c35290 PF02803 Thiolase, C-terminal domain BaLi_c35300 PF00378 Enoyl-CoA hydratase/isomerase BaLi_c35300 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BaLi_c35300 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BaLi_c35310 PF14115 YuzL-like protein BaLi_c35330 PF07875 Coat F domain BaLi_c35340 PF10835 Protein of unknown function (DUF2573) BaLi_c35360 PF00005 ABC transporter BaLi_c35370 PF01032 FecCD transport family BaLi_c35380 PF01032 FecCD transport family BaLi_c35390 PF01497 Periplasmic binding protein BaLi_c35400 PF14039 YusW-like protein BaLi_c35420 PF00768 D-alanyl-D-alanine carboxypeptidase BaLi_c35420 PF07943 Penicillin-binding protein 5, C-terminal domain BaLi_c35430 PF00106 short chain dehydrogenase BaLi_c35440 PF00210 Ferritin-like domain BaLi_c35450 PF13180 PDZ domain BaLi_c35460 PF00072 Response regulator receiver domain BaLi_c35460 PF00486 Transcriptional regulatory protein, C terminal BaLi_c35470 PF00672 HAMP domain BaLi_c35470 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c35470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c35480 PF00440 Bacterial regulatory proteins, tetR family BaLi_c35490 PF10415 Fumarase C C-terminus BaLi_c35490 PF00206 Lyase BaLi_c35500 PF13113 Protein of unknown function (DUF3970) BaLi_c35510 PF03323 Bacillus/Clostridium GerA spore germination protein BaLi_c35520 PF03845 Spore germination protein BaLi_c35530 PF05504 Spore germination B3/ GerAC like, C-terminal BaLi_c35550 PF00072 Response regulator receiver domain BaLi_c35550 PF00196 Bacterial regulatory proteins, luxR family BaLi_c35560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c35560 PF00672 HAMP domain BaLi_c35560 PF07730 Histidine kinase BaLi_c35570 PF09922 Cell wall-active antibiotics response 4TMS YvqF BaLi_c35590 PF04012 PspA/IM30 family BaLi_c35610 PF01095 Pectinesterase BaLi_c35620 PF01923 Cobalamin adenosyltransferase BaLi_c35640 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BaLi_c35670 PF00465 Iron-containing alcohol dehydrogenase BaLi_c35680 PF00701 Dihydrodipicolinate synthetase family BaLi_c35690 PF00005 ABC transporter BaLi_c35700 PF01032 FecCD transport family BaLi_c35710 PF01497 Periplasmic binding protein BaLi_c35720 PF07729 FCD domain BaLi_c35720 PF00392 Bacterial regulatory proteins, gntR family BaLi_c35730 PF00106 short chain dehydrogenase BaLi_c35740 PF03473 MOSC domain BaLi_c35740 PF03475 3-alpha domain BaLi_c35750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c35750 PF03466 LysR substrate binding domain BaLi_c35760 PF00295 Glycosyl hydrolases family 28 BaLi_c35770 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus BaLi_c35770 PF08666 SAF domain BaLi_c35780 PF08125 Mannitol dehydrogenase C-terminal domain BaLi_c35780 PF01232 Mannitol dehydrogenase Rossmann domain BaLi_c35790 PF00356 Bacterial regulatory proteins, lacI family BaLi_c35810 PF02614 Glucuronate isomerase BaLi_c35820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c35820 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c35830 PF00486 Transcriptional regulatory protein, C terminal BaLi_c35830 PF00072 Response regulator receiver domain BaLi_c35840 PF00005 ABC transporter BaLi_c35850 PF01032 FecCD transport family BaLi_c35860 PF01032 FecCD transport family BaLi_c35870 PF13520 Amino acid permease BaLi_c35880 PF04307 LexA-binding, inner membrane-associated putative hydrolase BaLi_c35890 PF00884 Sulfatase BaLi_c35900 PF07690 Major Facilitator Superfamily BaLi_c35910 PF00248 Aldo/keto reductase family BaLi_c35920 PF00480 ROK family BaLi_c35930 PF00266 Aminotransferase class-V BaLi_c35950 PF12697 Alpha/beta hydrolase family BaLi_c35960 PF13538 UvrD-like helicase C-terminal domain BaLi_c35970 PF03458 UPF0126 domain BaLi_c35980 PF13673 Acetyltransferase (GNAT) domain BaLi_c35980 PF04229 GrpB protein BaLi_c35990 PF13673 Acetyltransferase (GNAT) domain BaLi_c35990 PF00583 Acetyltransferase (GNAT) family BaLi_c36000 PF02600 Disulfide bond formation protein DsbB BaLi_c36010 PF13462 Thioredoxin BaLi_c36020 PF00403 Heavy-metal-associated domain BaLi_c36030 PF13416 Bacterial extracellular solute-binding protein BaLi_c36040 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c36050 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c36060 PF01055 Glycosyl hydrolases family 31 BaLi_c36060 PF13802 Galactose mutarotase-like BaLi_c36070 PF01915 Glycosyl hydrolase family 3 C-terminal domain BaLi_c36070 PF07691 PA14 domain BaLi_c36070 PF14310 Fibronectin type III-like domain BaLi_c36070 PF00933 Glycosyl hydrolase family 3 N terminal domain BaLi_c36080 PF00005 ABC transporter BaLi_c36090 PF00950 ABC 3 transport family BaLi_c36100 PF01297 Zinc-uptake complex component A periplasmic BaLi_c36120 PF01380 SIS domain BaLi_c36120 PF01418 Helix-turn-helix domain, rpiR family BaLi_c36140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c36140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c36150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c36160 PF01116 Fructose-bisphosphate aldolase class-II BaLi_c36170 PF00403 Heavy-metal-associated domain BaLi_c36180 PF00403 Heavy-metal-associated domain BaLi_c36190 PF02583 Metal-sensitive transcriptional repressor BaLi_c36200 PF01965 DJ-1/PfpI family BaLi_c36210 PF00455 DeoR C terminal sensor domain BaLi_c36210 PF08220 DeoR-like helix-turn-helix domain BaLi_c36220 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BaLi_c36220 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BaLi_c36230 PF01261 Xylose isomerase-like TIM barrel BaLi_c36250 PF00596 Class II Aldolase and Adducin N-terminal domain BaLi_c36260 PF07690 Major Facilitator Superfamily BaLi_c36270 PF07690 Major Facilitator Superfamily BaLi_c36280 PF16715 Cyclodipeptide synthase BaLi_c36290 PF00067 Cytochrome P450 BaLi_c36310 PF01047 MarR family BaLi_c36320 PF01425 Amidase BaLi_c36330 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c36330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c36340 PF02525 Flavodoxin-like fold BaLi_c36370 PF04545 Sigma-70, region 4 BaLi_c36380 PF12841 YvrJ protein family BaLi_c36390 PF00190 Cupin BaLi_c36400 PF14184 Regulatory protein YrvL BaLi_c36430 PF17189 Glycosyl hydrolase family 30 beta sandwich domain BaLi_c36440 PF04616 Glycosyl hydrolases family 43 BaLi_c36440 PF03422 Carbohydrate binding module (family 6) BaLi_c36450 PF14317 YcxB-like protein BaLi_c36470 PF14449 Pre-toxin TG BaLi_c36470 PF14431 YwqJ-like deaminase BaLi_c36470 PF04740 LXG domain of WXG superfamily BaLi_c36480 PF01668 SmpB protein BaLi_c36490 PF00575 S1 RNA binding domain BaLi_c36490 PF00773 RNB domain BaLi_c36490 PF08206 Ribonuclease B OB domain BaLi_c36490 PF17876 Cold shock domain BaLi_c36500 PF12146 Serine aminopeptidase, S33 BaLi_c36510 PF03840 Preprotein translocase SecG subunit BaLi_c36520 PF18277 AbrB C-terminal domain BaLi_c36520 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BaLi_c36530 PF01381 Helix-turn-helix BaLi_c36560 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c36570 PF04069 Substrate binding domain of ABC-type glycine betaine transport system BaLi_c36580 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c36590 PF00005 ABC transporter BaLi_c36590 PF00571 CBS domain BaLi_c36600 PF12802 MarR family BaLi_c36610 PF01914 MarC family integral membrane protein BaLi_c36630 PF13240 zinc-ribbon domain BaLi_c36640 PF01497 Periplasmic binding protein BaLi_c36650 PF00672 HAMP domain BaLi_c36650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c36650 PF02743 Cache domain BaLi_c36670 PF01965 DJ-1/PfpI family BaLi_c36680 PF00113 Enolase, C-terminal TIM barrel domain BaLi_c36680 PF03952 Enolase, N-terminal domain BaLi_c36690 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BaLi_c36690 PF01676 Metalloenzyme superfamily BaLi_c36700 PF00121 Triosephosphate isomerase BaLi_c36710 PF00162 Phosphoglycerate kinase BaLi_c36720 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BaLi_c36720 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BaLi_c36730 PF04198 Putative sugar-binding domain BaLi_c36740 PF00296 Luciferase-like monooxygenase BaLi_c36750 PF00324 Amino acid permease BaLi_c36770 PF00005 ABC transporter BaLi_c36790 PF02589 LUD domain BaLi_c36800 PF13183 4Fe-4S dicluster domain BaLi_c36800 PF11870 Domain of unknown function (DUF3390) BaLi_c36800 PF02589 LUD domain BaLi_c36810 PF02754 Cysteine-rich domain BaLi_c36820 PF07729 FCD domain BaLi_c36820 PF00392 Bacterial regulatory proteins, gntR family BaLi_c36830 PF02652 L-lactate permease BaLi_c36840 PF04552 Sigma-54, DNA binding domain BaLi_c36840 PF04963 Sigma-54 factor, core binding domain BaLi_c36840 PF00309 Sigma-54 factor, Activator interacting domain (AID) BaLi_c36850 PF09628 YvfG protein BaLi_c36860 PF04230 Polysaccharide pyruvyl transferase BaLi_c36870 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BaLi_c36880 PF00132 Bacterial transferase hexapeptide (six repeats) BaLi_c36880 PF17836 PglD N-terminal domain BaLi_c36890 PF02397 Bacterial sugar transferase BaLi_c36900 PF14667 Polysaccharide biosynthesis C-terminal domain BaLi_c36900 PF01943 Polysaccharide biosynthesis protein BaLi_c36910 PF00535 Glycosyl transferase family 2 BaLi_c36920 PF04230 Polysaccharide pyruvyl transferase BaLi_c36930 PF00535 Glycosyl transferase family 2 BaLi_c36950 PF13439 Glycosyltransferase Family 4 BaLi_c36950 PF00534 Glycosyl transferases group 1 BaLi_c36960 PF00535 Glycosyl transferase family 2 BaLi_c36970 PF13439 Glycosyltransferase Family 4 BaLi_c36970 PF00534 Glycosyl transferases group 1 BaLi_c36980 PF02719 Polysaccharide biosynthesis protein BaLi_c36990 PF13614 AAA domain BaLi_c37000 PF02706 Chain length determinant protein BaLi_c37010 PF08671 Anti-repressor SinI BaLi_c37010 PF01381 Helix-turn-helix BaLi_c37020 PF02525 Flavodoxin-like fold BaLi_c37030 PF07690 Major Facilitator Superfamily BaLi_c37040 PF01842 ACT domain BaLi_c37040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BaLi_c37040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c37050 PF04166 Pyridoxal phosphate biosynthetic protein PdxA BaLi_c37060 PF07005 Sugar-binding N-terminal domain BaLi_c37060 PF17042 Nucleotide-binding C-terminal domain BaLi_c37070 PF00465 Iron-containing alcohol dehydrogenase BaLi_c37080 PF00701 Dihydrodipicolinate synthetase family BaLi_c37090 PF00158 Sigma-54 interaction domain BaLi_c37090 PF00072 Response regulator receiver domain BaLi_c37090 PF02954 Bacterial regulatory protein, Fis family BaLi_c37100 PF01638 HxlR-like helix-turn-helix BaLi_c37110 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BaLi_c37120 PF02435 Levansucrase/Invertase BaLi_c37130 PF08244 Glycosyl hydrolases family 32 C terminal BaLi_c37130 PF00251 Glycosyl hydrolases family 32 N-terminal domain BaLi_c37150 PF00574 Clp protease BaLi_c37160 PF03641 Possible lysine decarboxylase BaLi_c37170 PF03819 MazG nucleotide pyrophosphohydrolase domain BaLi_c37180 PF01966 HD domain BaLi_c37190 PF01740 STAS domain BaLi_c37190 PF00916 Sulfate permease family BaLi_c37200 PF00484 Carbonic anhydrase BaLi_c37210 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c37210 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BaLi_c37220 PF01613 Flavin reductase like domain BaLi_c37240 PF00545 ribonuclease BaLi_c37250 PF01337 Barstar (barnase inhibitor) BaLi_c37260 PF00797 N-acetyltransferase BaLi_c37270 PF00381 PTS HPr component phosphorylation site BaLi_c37280 PF10298 WhiA N-terminal LAGLIDADG-like domain BaLi_c37280 PF02650 WhiA C-terminal HTH domain BaLi_c37280 PF14527 WhiA LAGLIDADG-like domain BaLi_c37290 PF01933 Uncharacterised protein family UPF0052 BaLi_c37300 PF03668 P-loop ATPase protein family BaLi_c37310 PF00293 NUDIX domain BaLi_c37320 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c37350 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BaLi_c37350 PF01502 Phosphoribosyl-AMP cyclohydrolase BaLi_c37360 PF00977 Histidine biosynthesis protein BaLi_c37370 PF00977 Histidine biosynthesis protein BaLi_c37380 PF00117 Glutamine amidotransferase class-I BaLi_c37390 PF00475 Imidazoleglycerol-phosphate dehydratase BaLi_c37400 PF00815 Histidinol dehydrogenase BaLi_c37410 PF01634 ATP phosphoribosyltransferase BaLi_c37420 PF13393 Histidyl-tRNA synthetase BaLi_c37430 PF13529 Peptidase_C39 like family BaLi_c37440 PF03211 Pectate lyase BaLi_c37450 PF14602 Hexapeptide repeat of succinyl-transferase BaLi_c37460 PF13419 Haloacid dehalogenase-like hydrolase BaLi_c37470 PF07670 Nucleoside recognition BaLi_c37480 PF01790 Prolipoprotein diacylglyceryl transferase BaLi_c37490 PF02603 HPr Serine kinase N terminus BaLi_c37490 PF07475 HPr Serine kinase C-terminal domain BaLi_c37500 PF01047 MarR family BaLi_c37510 PF07690 Major Facilitator Superfamily BaLi_c37520 PF00149 Calcineurin-like phosphoesterase BaLi_c37530 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BaLi_c37540 PF04024 PspC domain BaLi_c37550 PF13349 Putative adhesin BaLi_c37570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c37580 PF17760 UvrA interaction domain BaLi_c37580 PF17755 UvrA DNA-binding domain BaLi_c37580 PF00005 ABC transporter BaLi_c37590 PF02151 UvrB/uvrC motif BaLi_c37590 PF17757 UvrB interaction domain BaLi_c37590 PF12344 Ultra-violet resistance protein B BaLi_c37590 PF04851 Type III restriction enzyme, res subunit BaLi_c37590 PF00271 Helicase conserved C-terminal domain BaLi_c37600 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) BaLi_c37620 PF17820 PDZ domain BaLi_c37630 PF17423 Swarming motility protein BaLi_c37640 PF01471 Putative peptidoglycan binding domain BaLi_c37640 PF03572 Peptidase family S41 BaLi_c37640 PF17820 PDZ domain BaLi_c37650 PF00180 Isocitrate/isopropylmalate dehydrogenase BaLi_c37660 PF00877 NlpC/P60 family BaLi_c37670 PF18075 FtsX extracellular domain BaLi_c37670 PF02687 FtsX-like permease family BaLi_c37680 PF00005 ABC transporter BaLi_c37690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BaLi_c37700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c37700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c37710 PF00472 RF-1 domain BaLi_c37710 PF03462 PCRF domain BaLi_c37720 PF01043 SecA preprotein cross-linking domain BaLi_c37720 PF07516 SecA Wing and Scaffold domain BaLi_c37720 PF02810 SEC-C motif BaLi_c37720 PF07517 SecA DEAD-like domain BaLi_c37730 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BaLi_c37730 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BaLi_c37760 PF02561 Flagellar protein FliS BaLi_c37770 PF07195 Flagellar hook-associated protein 2 C-terminus BaLi_c37770 PF02465 Flagellar hook-associated protein 2 N-terminus BaLi_c37770 PF07196 Flagellin hook IN motif BaLi_c37780 PF03646 FlaG protein BaLi_c37790 PF00700 Bacterial flagellin C-terminal helical region BaLi_c37790 PF00669 Bacterial flagellin N-terminal helical region BaLi_c37800 PF02599 Global regulator protein family BaLi_c37810 PF02623 FliW protein BaLi_c37830 PF00669 Bacterial flagellin N-terminal helical region BaLi_c37830 PF00700 Bacterial flagellin C-terminal helical region BaLi_c37840 PF00460 Flagella basal body rod protein BaLi_c37840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BaLi_c37850 PF05130 FlgN protein BaLi_c37860 PF04316 Anti-sigma-28 factor, FlgM BaLi_c37890 PF10719 Late competence development protein ComFB BaLi_c37900 PF04851 Type III restriction enzyme, res subunit BaLi_c37900 PF00271 Helicase conserved C-terminal domain BaLi_c37910 PF02645 Uncharacterised protein, DegV family COG1307 BaLi_c37920 PF00196 Bacterial regulatory proteins, luxR family BaLi_c37920 PF00072 Response regulator receiver domain BaLi_c37930 PF07730 Histidine kinase BaLi_c37930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c37930 PF05384 Sensor protein DegS BaLi_c37940 PF09186 Domain of unknown function (DUF1949) BaLi_c37940 PF01205 Uncharacterized protein family UPF0029 BaLi_c37950 PF03816 Cell envelope-related transcriptional attenuator domain BaLi_c37970 PF00953 Glycosyl transferase family 4 BaLi_c37990 PF00535 Glycosyl transferase family 2 BaLi_c38000 PF02706 Chain length determinant protein BaLi_c38010 PF04932 O-Antigen ligase BaLi_c38020 PF16363 GDP-mannose 4,6 dehydratase BaLi_c38030 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BaLi_c38030 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BaLi_c38030 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BaLi_c38040 PF13439 Glycosyltransferase Family 4 BaLi_c38040 PF00534 Glycosyl transferases group 1 BaLi_c38050 PF14667 Polysaccharide biosynthesis C-terminal domain BaLi_c38050 PF01943 Polysaccharide biosynthesis protein BaLi_c38060 PF02397 Bacterial sugar transferase BaLi_c38070 PF01520 N-acetylmuramoyl-L-alanine amidase BaLi_c38070 PF04122 Putative cell wall binding repeat 2 BaLi_c38080 PF08486 Stage II sporulation protein BaLi_c38080 PF04122 Putative cell wall binding repeat 2 BaLi_c38100 PF03816 Cell envelope-related transcriptional attenuator domain BaLi_c38130 PF00665 Integrase core domain BaLi_c38130 PF13333 Integrase core domain BaLi_c38140 PF02350 UDP-N-acetylglucosamine 2-epimerase BaLi_c38150 PF00483 Nucleotidyl transferase BaLi_c38160 PF00005 ABC transporter BaLi_c38180 PF00005 ABC transporter BaLi_c38190 PF01061 ABC-2 type transporter BaLi_c38210 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BaLi_c38220 PF00483 Nucleotidyl transferase BaLi_c38260 PF00005 ABC transporter BaLi_c38270 PF01061 ABC-2 type transporter BaLi_c38280 PF00535 Glycosyl transferase family 2 BaLi_c38280 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BaLi_c38290 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BaLi_c38300 PF01467 Cytidylyltransferase-like BaLi_c38310 PF03808 Glycosyl transferase WecB/TagA/CpsF family BaLi_c38320 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase BaLi_c38330 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase BaLi_c38330 PF08239 Bacterial SH3 domain BaLi_c38330 PF05036 Sporulation related domain BaLi_c38340 PF01238 Phosphomannose isomerase type I BaLi_c38350 PF04055 Radical SAM superfamily BaLi_c38360 PF13597 Anaerobic ribonucleoside-triphosphate reductase BaLi_c38360 PF03477 ATP cone domain BaLi_c38370 PF03812 2-keto-3-deoxygluconate permease BaLi_c38380 PF01081 KDPG and KHG aldolase BaLi_c38390 PF00294 pfkB family carbohydrate kinase BaLi_c38400 PF00356 Bacterial regulatory proteins, lacI family BaLi_c38410 PF04962 KduI/IolB family BaLi_c38430 PF13823 Alcohol dehydrogenase GroES-associated BaLi_c38430 PF00107 Zinc-binding dehydrogenase BaLi_c38430 PF08240 Alcohol dehydrogenase GroES-like domain BaLi_c38440 PF00083 Sugar (and other) transporter BaLi_c38450 PF03816 Cell envelope-related transcriptional attenuator domain BaLi_c38470 PF00877 NlpC/P60 family BaLi_c38490 PF09587 Bacterial capsule synthesis protein PGA_cap BaLi_c38500 PF14102 Capsule biosynthesis CapC BaLi_c38510 PF08245 Mur ligase middle domain BaLi_c38520 PF00356 Bacterial regulatory proteins, lacI family BaLi_c38530 PF00294 pfkB family carbohydrate kinase BaLi_c38540 PF05025 RbsD / FucU transport protein family BaLi_c38550 PF00005 ABC transporter BaLi_c38560 PF02653 Branched-chain amino acid transport system / permease component BaLi_c38570 PF13407 Periplasmic binding protein domain BaLi_c38580 PF03466 LysR substrate binding domain BaLi_c38580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c38590 PF08241 Methyltransferase domain BaLi_c38600 PF03306 Alpha-acetolactate decarboxylase BaLi_c38610 PF00205 Thiamine pyrophosphate enzyme, central domain BaLi_c38610 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BaLi_c38610 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BaLi_c38620 PF03466 LysR substrate binding domain BaLi_c38620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c38640 PF13404 AsnC-type helix-turn-helix domain BaLi_c38640 PF01037 Lrp/AsnC ligand binding domain BaLi_c38650 PF02417 Chromate transporter BaLi_c38660 PF02417 Chromate transporter BaLi_c38680 PF13807 G-rich domain on putative tyrosine kinase BaLi_c38680 PF02706 Chain length determinant protein BaLi_c38700 PF04434 SWIM zinc finger BaLi_c38710 PF00176 SNF2 family N-terminal domain BaLi_c38710 PF00271 Helicase conserved C-terminal domain BaLi_c38710 PF12419 SNF2 Helicase protein BaLi_c38720 PF09234 Domain of unknown function (DUF1963) BaLi_c38730 PF00004 ATPase family associated with various cellular activities (AAA) BaLi_c38730 PF17862 AAA+ lid domain BaLi_c38730 PF01434 Peptidase family M41 BaLi_c38770 PF00455 DeoR C terminal sensor domain BaLi_c38770 PF08220 DeoR-like helix-turn-helix domain BaLi_c38780 PF00923 Transaldolase/Fructose-6-phosphate aldolase BaLi_c38790 PF00106 short chain dehydrogenase BaLi_c38800 PF03829 PTS system glucitol/sorbitol-specific IIA component BaLi_c38810 PF03612 Sorbitol phosphotransferase enzyme II N-terminus BaLi_c38810 PF07663 Sorbitol phosphotransferase enzyme II C-terminus BaLi_c38820 PF03608 PTS system enzyme II sorbitol-specific factor BaLi_c38840 PF13936 Helix-turn-helix domain BaLi_c38840 PF04198 Putative sugar-binding domain BaLi_c38850 PF00436 Single-strand binding protein family BaLi_c38870 PF14183 YwpF-like protein BaLi_c38880 PF01741 Large-conductance mechanosensitive channel, MscL BaLi_c38890 PF07977 FabA-like domain BaLi_c38900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BaLi_c38900 PF00460 Flagella basal body rod protein BaLi_c38910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BaLi_c38910 PF00460 Flagella basal body rod protein BaLi_c38930 PF12116 Stage III sporulation protein D BaLi_c38940 PF01047 MarR family BaLi_c38950 PF07690 Major Facilitator Superfamily BaLi_c38960 PF01569 PAP2 superfamily BaLi_c38970 PF02833 DHHA2 domain BaLi_c38970 PF01368 DHH family BaLi_c38980 PF05067 Manganese containing catalase BaLi_c38990 PF09844 Uncharacterized conserved protein (COG2071) BaLi_c39020 PF00571 CBS domain BaLi_c39030 PF01544 CorA-like Mg2+ transporter protein BaLi_c39040 PF00571 CBS domain BaLi_c39040 PF03471 Transporter associated domain BaLi_c39040 PF01595 Cyclin M transmembrane N-terminal domain BaLi_c39050 PF00909 Ammonium Transporter Family BaLi_c39060 PF00543 Nitrogen regulatory protein P-II BaLi_c39080 PF00574 Clp protease BaLi_c39090 PF04542 Sigma-70 region 2 BaLi_c39090 PF12680 SnoaL-like domain BaLi_c39090 PF08281 Sigma-70, region 4 BaLi_c39100 PF01551 Peptidase family M23 BaLi_c39110 PF00583 Acetyltransferase (GNAT) family BaLi_c39120 PF17370 Family of unknown function (DUF5392) BaLi_c39130 PF13396 Phospholipase_D-nuclease N-terminal BaLi_c39130 PF13091 PLD-like domain BaLi_c39140 PF07690 Major Facilitator Superfamily BaLi_c39150 PF00550 Phosphopantetheine attachment site BaLi_c39150 PF00668 Condensation domain BaLi_c39150 PF13193 AMP-binding enzyme C-terminal domain BaLi_c39150 PF00501 AMP-binding enzyme BaLi_c39150 PF00975 Thioesterase domain BaLi_c39160 PF00857 Isochorismatase family BaLi_c39160 PF00550 Phosphopantetheine attachment site BaLi_c39170 PF13193 AMP-binding enzyme C-terminal domain BaLi_c39170 PF00501 AMP-binding enzyme BaLi_c39180 PF00425 chorismate binding enzyme BaLi_c39190 PF00106 short chain dehydrogenase BaLi_c39200 PF00756 Putative esterase BaLi_c39210 PF01032 FecCD transport family BaLi_c39220 PF01032 FecCD transport family BaLi_c39230 PF01497 Periplasmic binding protein BaLi_c39240 PF01497 Periplasmic binding protein BaLi_c39240 PF12833 Helix-turn-helix domain BaLi_c39250 PF17319 Family of unknown function (DUF5362) BaLi_c39260 PF13302 Acetyltransferase (GNAT) domain BaLi_c39270 PF02082 Transcriptional regulator BaLi_c39300 PF06463 Molybdenum Cofactor Synthesis C BaLi_c39300 PF04055 Radical SAM superfamily BaLi_c39310 PF02634 FdhD/NarQ family BaLi_c39320 PF07690 Major Facilitator Superfamily BaLi_c39330 PF12838 4Fe-4S dicluster domain BaLi_c39330 PF04879 Molybdopterin oxidoreductase Fe4S4 domain BaLi_c39330 PF00384 Molybdopterin oxidoreductase BaLi_c39330 PF01568 Molydopterin dinucleotide binding domain BaLi_c39330 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BaLi_c39340 PF00092 von Willebrand factor type A domain BaLi_c39350 PF00092 von Willebrand factor type A domain BaLi_c39360 PF08486 Stage II sporulation protein BaLi_c39370 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BaLi_c39380 PF08680 TATA-box binding BaLi_c39390 PF06612 Protein of unknown function (DUF1146) BaLi_c39400 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BaLi_c39400 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BaLi_c39410 PF02874 ATP synthase alpha/beta family, beta-barrel domain BaLi_c39410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BaLi_c39420 PF00231 ATP synthase BaLi_c39430 PF02874 ATP synthase alpha/beta family, beta-barrel domain BaLi_c39430 PF00306 ATP synthase alpha/beta chain, C terminal domain BaLi_c39430 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BaLi_c39440 PF00213 ATP synthase delta (OSCP) subunit BaLi_c39450 PF00430 ATP synthase B/B' CF(0) BaLi_c39460 PF00137 ATP synthase subunit C BaLi_c39470 PF00119 ATP synthase A chain BaLi_c39480 PF03899 ATP synthase I chain BaLi_c39500 PF00464 Serine hydroxymethyltransferase BaLi_c39510 PF04260 Protein of unknown function (DUF436) BaLi_c39520 PF02502 Ribose/Galactose Isomerase BaLi_c39530 PF01451 Low molecular weight phosphotyrosine protein phosphatase BaLi_c39540 PF02659 Putative manganese efflux pump BaLi_c39550 PF03481 Putative GTP-binding controlling metal-binding BaLi_c39550 PF01300 Telomere recombination BaLi_c39570 PF09551 Stage II sporulation protein R (spore_II_R) BaLi_c39580 PF07690 Major Facilitator Superfamily BaLi_c39590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c39590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c39600 PF05116 Sucrose-6F-phosphate phosphohydrolase BaLi_c39610 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BaLi_c39620 PF00356 Bacterial regulatory proteins, lacI family BaLi_c39640 PF17827 PrmC N-terminal domain BaLi_c39640 PF05175 Methyltransferase small domain BaLi_c39650 PF00472 RF-1 domain BaLi_c39650 PF03462 PCRF domain BaLi_c39660 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c39670 PF13411 MerR HTH family regulatory protein BaLi_c39680 PF03547 Membrane transport protein BaLi_c39690 PF00390 Malic enzyme, N-terminal domain BaLi_c39690 PF03949 Malic enzyme, NAD binding domain BaLi_c39700 PF00265 Thymidine kinase BaLi_c39710 PF01197 Ribosomal protein L31 BaLi_c39720 PF07497 Rho termination factor, RNA-binding domain BaLi_c39720 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BaLi_c39720 PF07498 Rho termination factor, N-terminal domain BaLi_c39730 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded BaLi_c39740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BaLi_c39750 PF00923 Transaldolase/Fructose-6-phosphate aldolase BaLi_c39760 PF01116 Fructose-bisphosphate aldolase class-II BaLi_c39770 PF00072 Response regulator receiver domain BaLi_c39780 PF10740 Domain of unknown function (DUF2529) BaLi_c39790 PF00117 Glutamine amidotransferase class-I BaLi_c39790 PF06418 CTP synthase N-terminus BaLi_c39800 PF05066 HB1, ASXL, restriction endonuclease HTH domain BaLi_c39810 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c39810 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c39810 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c39820 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BaLi_c39820 PF02770 Acyl-CoA dehydrogenase, middle domain BaLi_c39820 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BaLi_c39830 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BaLi_c39830 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BaLi_c39840 PF02803 Thiolase, C-terminal domain BaLi_c39840 PF00108 Thiolase, N-terminal domain BaLi_c39850 PF02754 Cysteine-rich domain BaLi_c39850 PF13183 4Fe-4S dicluster domain BaLi_c39860 PF13091 PLD-like domain BaLi_c39880 PF03485 Arginyl tRNA synthetase N terminal domain BaLi_c39880 PF00750 tRNA synthetases class I (R) BaLi_c39880 PF05746 DALR anticodon binding domain BaLi_c39890 PF09148 Domain of unknown function (DUF1934) BaLi_c39900 PF00491 Arginase family BaLi_c39910 PF17284 Spermidine synthase tetramerisation domain BaLi_c39920 PF00912 Transglycosylase BaLi_c39920 PF00905 Penicillin binding protein transpeptidase domain BaLi_c39930 PF08741 YwhD family BaLi_c39940 PF02163 Peptidase family M50 BaLi_c39950 PF01361 Tautomerase enzyme BaLi_c39980 PF01966 HD domain BaLi_c39990 PF07293 Protein of unknown function (DUF1450) BaLi_c40010 PF14154 Domain of unknown function (DUF4306) BaLi_c40020 PF03099 Biotin/lipoate A/B protein ligase family BaLi_c40030 PF01494 FAD binding domain BaLi_c40040 PF07690 Major Facilitator Superfamily BaLi_c40060 PF01361 Tautomerase enzyme BaLi_c40080 PF00171 Aldehyde dehydrogenase family BaLi_c40090 PF01614 Bacterial transcriptional regulator BaLi_c40090 PF09339 IclR helix-turn-helix domain BaLi_c40110 PF01515 Phosphate acetyl/butaryl transferase BaLi_c40130 PF17735 Biofilm surface layer A BaLi_c40150 PF02386 Cation transport protein BaLi_c40160 PF09671 Spore coat protein (Spore_GerQ) BaLi_c40190 PF00005 ABC transporter BaLi_c40210 PF00072 Response regulator receiver domain BaLi_c40210 PF00196 Bacterial regulatory proteins, luxR family BaLi_c40220 PF04241 Protein of unknown function (DUF423) BaLi_c40230 PF00860 Permease family BaLi_c40240 PF17261 Family of unknown function (DUF5327) BaLi_c40250 PF00171 Aldehyde dehydrogenase family BaLi_c40260 PF03167 Uracil DNA glycosylase superfamily BaLi_c40270 PF00535 Glycosyl transferase family 2 BaLi_c40280 PF08543 Phosphomethylpyrimidine kinase BaLi_c40300 PF08244 Glycosyl hydrolases family 32 C terminal BaLi_c40300 PF00251 Glycosyl hydrolases family 32 N-terminal domain BaLi_c40310 PF00367 phosphotransferase system, EIIB BaLi_c40310 PF02378 Phosphotransferase system, EIIC BaLi_c40320 PF03123 CAT RNA binding domain BaLi_c40320 PF00874 PRD domain BaLi_c40340 PF00082 Subtilase family BaLi_c40340 PF02225 PA domain BaLi_c40340 PF05922 Peptidase inhibitor I9 BaLi_c40340 PF13860 FlgD Ig-like domain BaLi_c40360 PF00296 Luciferase-like monooxygenase BaLi_c40370 PF00881 Nitroreductase family BaLi_c40380 PF07687 Peptidase dimerisation domain BaLi_c40380 PF01546 Peptidase family M20/M25/M40 BaLi_c40390 PF01098 Cell cycle protein BaLi_c40400 PF01098 Cell cycle protein BaLi_c40420 PF17368 Spore morphogenesis and germination YwcE BaLi_c40440 PF00583 Acetyltransferase (GNAT) family BaLi_c40450 PF00005 ABC transporter BaLi_c40460 PF00005 ABC transporter BaLi_c40500 PF00072 Response regulator receiver domain BaLi_c40500 PF00196 Bacterial regulatory proteins, luxR family BaLi_c40510 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BaLi_c40520 PF00510 Cytochrome c oxidase subunit III BaLi_c40530 PF00115 Cytochrome C and Quinol oxidase polypeptide I BaLi_c40540 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BaLi_c40540 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BaLi_c40550 PF16363 GDP-mannose 4,6 dehydratase BaLi_c40560 PF03358 NADPH-dependent FMN reductase BaLi_c40570 PF04341 Protein of unknown function, DUF485 BaLi_c40580 PF00474 Sodium:solute symporter family BaLi_c40590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BaLi_c40590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BaLi_c40600 PF01261 Xylose isomerase-like TIM barrel BaLi_c40610 PF00480 ROK family BaLi_c40620 PF02581 Thiamine monophosphate synthase BaLi_c40630 PF02110 Hydroxyethylthiazole kinase family BaLi_c40640 PF03466 LysR substrate binding domain BaLi_c40640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BaLi_c40670 PF03788 LrgA family BaLi_c40680 PF04172 LrgB-like family BaLi_c40690 PF00474 Sodium:solute symporter family BaLi_c40700 PF17785 PUA-like domain BaLi_c40700 PF10672 S-adenosylmethionine-dependent methyltransferase BaLi_c40710 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BaLi_c40720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BaLi_c40720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c40730 PF01501 Glycosyl transferase family 8 BaLi_c40740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c40740 PF07730 Histidine kinase BaLi_c40750 PF00196 Bacterial regulatory proteins, luxR family BaLi_c40750 PF00072 Response regulator receiver domain BaLi_c40760 PF03176 MMPL family BaLi_c40770 PF09529 Integral membrane protein (intg_mem_TP0381) BaLi_c40780 PF07690 Major Facilitator Superfamily BaLi_c40790 PF13378 Enolase C-terminal domain-like BaLi_c40790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BaLi_c40800 PF01081 KDPG and KHG aldolase BaLi_c40810 PF00294 pfkB family carbohydrate kinase BaLi_c40820 PF09339 IclR helix-turn-helix domain BaLi_c40820 PF01614 Bacterial transcriptional regulator BaLi_c40830 PF02225 PA domain BaLi_c40830 PF04389 Peptidase family M28 BaLi_c40840 PF07690 Major Facilitator Superfamily BaLi_c40860 PF00330 Aconitase family (aconitate hydratase) BaLi_c40870 PF04607 Region found in RelA / SpoT proteins BaLi_c40880 PF12459 D-Ala-teichoic acid biosynthesis protein BaLi_c40890 PF00501 AMP-binding enzyme BaLi_c40890 PF13193 AMP-binding enzyme C-terminal domain BaLi_c40900 PF03062 MBOAT, membrane-bound O-acyltransferase family BaLi_c40910 PF00550 Phosphopantetheine attachment site BaLi_c40920 PF04914 DltD protein BaLi_c40930 PF01063 Amino-transferase class IV BaLi_c40940 PF07690 Major Facilitator Superfamily BaLi_c40950 PF02056 Family 4 glycosyl hydrolase BaLi_c40950 PF11975 Family 4 glycosyl hydrolase C-terminal domain BaLi_c40960 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit BaLi_c40970 PF02378 Phosphotransferase system, EIIC BaLi_c40980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BaLi_c40990 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BaLi_c40990 PF00874 PRD domain BaLi_c40990 PF05043 Mga helix-turn-helix domain BaLi_c40990 PF08279 HTH domain BaLi_c41010 PF02245 Methylpurine-DNA glycosylase (MPG) BaLi_c41020 PF07729 FCD domain BaLi_c41020 PF00392 Bacterial regulatory proteins, gntR family BaLi_c41030 PF00285 Citrate synthase, C-terminal domain BaLi_c41040 PF03972 MmgE/PrpD family BaLi_c41080 PF00005 ABC transporter BaLi_c41080 PF00664 ABC transporter transmembrane region BaLi_c41090 PF13472 GDSL-like Lipase/Acylhydrolase family BaLi_c41100 PF17735 Biofilm surface layer A BaLi_c41110 PF17735 Biofilm surface layer A BaLi_c41120 PF07690 Major Facilitator Superfamily BaLi_c41130 PF12679 ABC-2 family transporter protein BaLi_c41140 PF00005 ABC transporter BaLi_c41140 PF13732 Domain of unknown function (DUF4162) BaLi_c41150 PF13396 Phospholipase_D-nuclease N-terminal BaLi_c41180 PF04542 Sigma-70 region 2 BaLi_c41180 PF08281 Sigma-70, region 4 BaLi_c41190 PF07690 Major Facilitator Superfamily BaLi_c41210 PF06628 Catalase-related immune-responsive BaLi_c41210 PF00199 Catalase BaLi_c41230 PF00199 Catalase BaLi_c41230 PF06628 Catalase-related immune-responsive BaLi_c41240 PF01475 Ferric uptake regulator family BaLi_c41260 PF00544 Pectate lyase BaLi_c41270 PF01256 Carbohydrate kinase BaLi_c41280 PF00005 ABC transporter BaLi_c41280 PF00664 ABC transporter transmembrane region BaLi_c41290 PF00005 ABC transporter BaLi_c41290 PF00664 ABC transporter transmembrane region BaLi_c41300 PF02322 Cytochrome bd terminal oxidase subunit II BaLi_c41310 PF01654 Cytochrome bd terminal oxidase subunit I BaLi_c41320 PF01226 Formate/nitrite transporter BaLi_c41340 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BaLi_c41340 PF03949 Malic enzyme, NAD binding domain BaLi_c41340 PF00390 Malic enzyme, N-terminal domain BaLi_c41350 PF03553 Na+/H+ antiporter family BaLi_c41360 PF00206 Lyase BaLi_c41360 PF10415 Fumarase C C-terminus BaLi_c41370 PF00710 Asparaginase, N-terminal BaLi_c41370 PF17763 Glutaminase/Asparaginase C-terminal domain BaLi_c41380 PF01381 Helix-turn-helix BaLi_c41390 PF10282 Lactonase, 7-bladed beta-propeller BaLi_c41400 PF00486 Transcriptional regulatory protein, C terminal BaLi_c41400 PF00072 Response regulator receiver domain BaLi_c41410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c41420 PF00005 ABC transporter BaLi_c41430 PF02687 FtsX-like permease family BaLi_c41440 PF06486 Protein of unknown function (DUF1093) BaLi_c41470 PF01522 Polysaccharide deacetylase BaLi_c41480 PF00392 Bacterial regulatory proteins, gntR family BaLi_c41480 PF00155 Aminotransferase class I and II BaLi_c41500 PF03552 Cellulose synthase BaLi_c41500 PF00535 Glycosyl transferase family 2 BaLi_c41500 PF07238 PilZ domain BaLi_c41510 PF03390 2-hydroxycarboxylate transporter family BaLi_c41520 PF03009 Glycerophosphoryl diester phosphodiesterase family BaLi_c41530 PF05901 Excalibur calcium-binding domain BaLi_c41550 PF00884 Sulfatase BaLi_c41560 PF17353 Family of unknown function (DUF5381) BaLi_c41570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BaLi_c41570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BaLi_c41580 PF02863 Arginine repressor, C-terminal domain BaLi_c41580 PF01316 Arginine repressor, DNA binding domain BaLi_c41600 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BaLi_c41600 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BaLi_c41610 PF13520 Amino acid permease BaLi_c41620 PF00696 Amino acid kinase family BaLi_c41640 PF00232 Glycosyl hydrolase family 1 BaLi_c41650 PF02378 Phosphotransferase system, EIIC BaLi_c41670 PF04542 Sigma-70 region 2 BaLi_c41670 PF08281 Sigma-70, region 4 BaLi_c41690 PF07687 Peptidase dimerisation domain BaLi_c41690 PF01546 Peptidase family M20/M25/M40 BaLi_c41700 PF00251 Glycosyl hydrolases family 32 N-terminal domain BaLi_c41700 PF08244 Glycosyl hydrolases family 32 C terminal BaLi_c41710 PF01306 LacY proton/sugar symporter BaLi_c41720 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c41730 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c41750 PF00356 Bacterial regulatory proteins, lacI family BaLi_c41790 PF01717 Cobalamin-independent synthase, Catalytic domain BaLi_c41800 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BaLi_c41810 PF00535 Glycosyl transferase family 2 BaLi_c41820 PF01370 NAD dependent epimerase/dehydratase family BaLi_c41870 PF01773 Na+ dependent nucleoside transporter N-terminus BaLi_c41870 PF07662 Na+ dependent nucleoside transporter C-terminus BaLi_c41890 PF18011 C-terminal domain found in long catalases BaLi_c41890 PF06628 Catalase-related immune-responsive BaLi_c41890 PF00199 Catalase BaLi_c41910 PF00232 Glycosyl hydrolase family 1 BaLi_c41920 PF00367 phosphotransferase system, EIIB BaLi_c41920 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BaLi_c41920 PF02378 Phosphotransferase system, EIIC BaLi_c41930 PF03123 CAT RNA binding domain BaLi_c41930 PF00874 PRD domain BaLi_c41940 PF02361 Cobalt transport protein BaLi_c41950 PF00005 ABC transporter BaLi_c41960 PF09819 ABC-type cobalt transport system, permease component BaLi_c41970 PF03070 TENA/THI-4/PQQC family BaLi_c41990 PF00463 Isocitrate lyase family BaLi_c42000 PF01274 Malate synthase BaLi_c42010 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BaLi_c42020 PF02687 FtsX-like permease family BaLi_c42030 PF00005 ABC transporter BaLi_c42040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c42050 PF00486 Transcriptional regulatory protein, C terminal BaLi_c42050 PF00072 Response regulator receiver domain BaLi_c42060 PF00232 Glycosyl hydrolase family 1 BaLi_c42070 PF00367 phosphotransferase system, EIIB BaLi_c42070 PF02378 Phosphotransferase system, EIIC BaLi_c42070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BaLi_c42090 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family BaLi_c42100 PF04616 Glycosyl hydrolases family 43 BaLi_c42100 PF16369 C-terminal lipocalin-like domain BaLi_c42110 PF00271 Helicase conserved C-terminal domain BaLi_c42110 PF00270 DEAD/DEAH box helicase BaLi_c42110 PF03880 DbpA RNA binding domain BaLi_c42190 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain BaLi_c42190 PF00591 Glycosyl transferase family, a/b domain BaLi_c42190 PF02885 Glycosyl transferase family, helical bundle domain BaLi_c42200 PF07662 Na+ dependent nucleoside transporter C-terminus BaLi_c42200 PF01773 Na+ dependent nucleoside transporter N-terminus BaLi_c42210 PF01791 DeoC/LacD family aldolase BaLi_c42220 PF04198 Putative sugar-binding domain BaLi_c42240 PF00990 Diguanylate cyclase, GGDEF domain BaLi_c42250 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) BaLi_c42270 PF03170 Bacterial cellulose synthase subunit BaLi_c42280 PF00155 Aminotransferase class I and II BaLi_c42310 PF07478 D-ala D-ala ligase C-terminus BaLi_c42330 PF01116 Fructose-bisphosphate aldolase class-II BaLi_c42340 PF01261 Xylose isomerase-like TIM barrel BaLi_c42350 PF01261 Xylose isomerase-like TIM barrel BaLi_c42360 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BaLi_c42360 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BaLi_c42370 PF07690 Major Facilitator Superfamily BaLi_c42380 PF01261 Xylose isomerase-like TIM barrel BaLi_c42390 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BaLi_c42390 PF00205 Thiamine pyrophosphate enzyme, central domain BaLi_c42390 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BaLi_c42400 PF00294 pfkB family carbohydrate kinase BaLi_c42410 PF04962 KduI/IolB family BaLi_c42420 PF00171 Aldehyde dehydrogenase family BaLi_c42430 PF08220 DeoR-like helix-turn-helix domain BaLi_c42430 PF00455 DeoR C terminal sensor domain BaLi_c42440 PF00248 Aldo/keto reductase family BaLi_c42450 PF03009 Glycerophosphoryl diester phosphodiesterase family BaLi_c42460 PF07690 Major Facilitator Superfamily BaLi_c42470 PF00183 Hsp90 protein BaLi_c42480 PF12848 ABC transporter BaLi_c42480 PF00005 ABC transporter BaLi_c42530 PF01497 Periplasmic binding protein BaLi_c42560 PF17910 FeoB cytosolic helical domain BaLi_c42560 PF02421 Ferrous iron transport protein B BaLi_c42560 PF07664 Ferrous iron transport protein B C terminus BaLi_c42560 PF07670 Nucleoside recognition BaLi_c42580 PF01757 Acyltransferase family BaLi_c42590 PF02687 FtsX-like permease family BaLi_c42600 PF00005 ABC transporter BaLi_c42610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c42620 PF00072 Response regulator receiver domain BaLi_c42620 PF00486 Transcriptional regulatory protein, C terminal BaLi_c42640 PF00672 HAMP domain BaLi_c42640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BaLi_c42640 PF05227 CHASE3 domain BaLi_c42650 PF01235 Sodium:alanine symporter family BaLi_c42660 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BaLi_c42660 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BaLi_c42670 PF07745 Glycosyl hydrolase family 53 BaLi_c42680 PF08532 Beta-galactosidase trimerisation domain BaLi_c42680 PF08533 Beta-galactosidase C-terminal domain BaLi_c42680 PF02449 Beta-galactosidase BaLi_c42690 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c42700 PF00528 Binding-protein-dependent transport system inner membrane component BaLi_c42710 PF13416 Bacterial extracellular solute-binding protein BaLi_c42720 PF00356 Bacterial regulatory proteins, lacI family BaLi_c42730 PF00288 GHMP kinases N terminal domain BaLi_c42730 PF08544 GHMP kinases C terminal BaLi_c42730 PF10509 Galactokinase galactose-binding signature BaLi_c42740 PF16363 GDP-mannose 4,6 dehydratase BaLi_c42750 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BaLi_c42750 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BaLi_c42760 PF00480 ROK family BaLi_c42760 PF01325 Iron dependent repressor, N-terminal DNA binding domain BaLi_c42780 PF00581 Rhodanese-like domain BaLi_c42790 PF01878 EVE domain BaLi_c42800 PF07729 FCD domain BaLi_c42800 PF00392 Bacterial regulatory proteins, gntR family BaLi_c42810 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BaLi_c42810 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BaLi_c42820 PF02447 GntP family permease BaLi_c42830 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BaLi_c42830 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BaLi_c42840 PF00465 Iron-containing alcohol dehydrogenase BaLi_c42840 PF00171 Aldehyde dehydrogenase family BaLi_c42850 PF00578 AhpC/TSA family BaLi_c42860 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c42860 PF13192 Thioredoxin domain BaLi_c42870 PF00324 Amino acid permease BaLi_c42920 PF06874 Firmicute fructose-1,6-bisphosphatase BaLi_c42930 PF13192 Thioredoxin domain BaLi_c42930 PF07992 Pyridine nucleotide-disulphide oxidoreductase BaLi_c42950 PF01497 Periplasmic binding protein BaLi_c42960 PF01032 FecCD transport family BaLi_c42970 PF01032 FecCD transport family BaLi_c43000 PF00005 ABC transporter BaLi_c43020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c43020 PF07730 Histidine kinase BaLi_c43030 PF00196 Bacterial regulatory proteins, luxR family BaLi_c43030 PF00072 Response regulator receiver domain BaLi_c43040 PF13538 UvrD-like helicase C-terminal domain BaLi_c43060 PF02590 Predicted SPOUT methyltransferase BaLi_c43070 PF14116 YyzF-like protein BaLi_c43090 PF00583 Acetyltransferase (GNAT) family BaLi_c43120 PF13180 PDZ domain BaLi_c43130 PF00753 Metallo-beta-lactamase superfamily BaLi_c43140 PF09648 YycH protein BaLi_c43150 PF07435 YycH protein BaLi_c43160 PF00672 HAMP domain BaLi_c43160 PF13426 PAS domain BaLi_c43160 PF00512 His Kinase A (phospho-acceptor) domain BaLi_c43160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BaLi_c43170 PF00072 Response regulator receiver domain BaLi_c43170 PF00486 Transcriptional regulatory protein, C terminal BaLi_c43220 PF00293 NUDIX domain BaLi_c43220 PF13344 Haloacid dehalogenase-like hydrolase BaLi_c43230 PF00709 Adenylosuccinate synthetase BaLi_c43250 PF03796 DnaB-like helicase C terminal domain BaLi_c43250 PF00772 DnaB-like helicase N terminal domain BaLi_c43260 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) BaLi_c43280 PF14174 YycC-like protein BaLi_c43290 PF07690 Major Facilitator Superfamily BaLi_c43300 PF01979 Amidohydrolase family BaLi_c43310 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BaLi_c43330 PF01380 SIS domain BaLi_c43340 PF00367 phosphotransferase system, EIIB BaLi_c43340 PF02378 Phosphotransferase system, EIIC BaLi_c43350 PF01281 Ribosomal protein L9, N-terminal domain BaLi_c43350 PF03948 Ribosomal protein L9, C-terminal domain BaLi_c43360 PF01368 DHH family BaLi_c43360 PF02272 DHHA1 domain BaLi_c43370 PF09991 Predicted membrane protein (DUF2232) BaLi_c43390 PF07875 Coat F domain BaLi_c43400 PF00582 Universal stress protein family BaLi_c43410 PF01740 STAS domain BaLi_c43410 PF00916 Sulfate permease family BaLi_c43420 PF07690 Major Facilitator Superfamily BaLi_c43430 PF01084 Ribosomal protein S18 BaLi_c43440 PF00436 Single-strand binding protein family BaLi_c43450 PF01250 Ribosomal protein S6 BaLi_c43460 PF01926 50S ribosome-binding GTPase BaLi_c43460 PF06071 Protein of unknown function (DUF933) BaLi_c43470 PF06107 Bacterial protein of unknown function (DUF951) BaLi_c43490 PF06866 Protein of unknown function (DUF1256) BaLi_c43500 PF17762 HTH domain found in ParB protein BaLi_c43500 PF02195 ParB-like nuclease domain BaLi_c43510 PF13614 AAA domain BaLi_c43520 PF02627 Carboxymuconolactone decarboxylase family BaLi_c43530 PF04542 Sigma-70 region 2 BaLi_c43530 PF12680 SnoaL-like domain BaLi_c43530 PF08281 Sigma-70, region 4 BaLi_c43540 PF02195 ParB-like nuclease domain BaLi_c43540 PF17762 HTH domain found in ParB protein BaLi_c43550 PF02527 rRNA small subunit methyltransferase G BaLi_c43560 PF01134 Glucose inhibited division protein A BaLi_c43560 PF13932 GidA associated domain BaLi_c43570 PF12631 MnmE helical domain BaLi_c43570 PF01926 50S ribosome-binding GTPase BaLi_c43570 PF10396 GTP-binding protein TrmE N-terminus BaLi_c43580 PF01424 R3H domain BaLi_c43580 PF14804 Jag N-terminus BaLi_c43590 PF02096 60Kd inner membrane protein BaLi_c43600 PF00825 Ribonuclease P BaLi_c43610 PF00468 Ribosomal protein L34