locus-tag	class	description
BaLi_c00010	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
BaLi_c00020	COG0592	DNA-directed DNA polymerase activity
BaLi_c00030	COG2501	S4 domain
BaLi_c00040	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
BaLi_c00060	COG0187	DNA topoisomerase II activity
BaLi_c00070	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BaLi_c00140	COG0516	GMP reductase activity
BaLi_c00140	COG0517	IMP dehydrogenase activity
BaLi_c00150	COG1686	Belongs to the peptidase S11 family
BaLi_c00160	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
BaLi_c00170	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
BaLi_c00180	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
BaLi_c00190	COG1929	Belongs to the glycerate kinase type-1 family
BaLi_c00200	COG2610	gluconate transmembrane transporter activity
BaLi_c00210	COG3835	regulator
BaLi_c00240	COG1428	Deoxynucleoside kinase
BaLi_c00250	COG1428	Deoxynucleoside kinase
BaLi_c00260	COG3858	chitin binding
BaLi_c00260	COG1388	LysM domain
BaLi_c00270	COG1335	isochorismatase
BaLi_c00280	COG0590	tRNA wobble adenosine to inosine editing
BaLi_c00300	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
BaLi_c00310	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
BaLi_c00320	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
BaLi_c00400	COG4915	5-bromo-4-chloroindolyl phosphate hydrolysis protein
BaLi_c00410	COG3853	Toxic anion resistance protein (TelA)
BaLi_c00420	COG1982	Orn Lys Arg decarboxylase major
BaLi_c00430	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
BaLi_c00440	COG3870	Protein conserved in bacteria
BaLi_c00450	COG1728	Protein conserved in bacteria
BaLi_c00460	COG0470	DNA polymerase III
BaLi_c00470	COG1774	PSP1 C-terminal conserved region
BaLi_c00480	COG4467	Involved in initiation control of chromosome replication
BaLi_c00490	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
BaLi_c00500	COG2827	Endonuclease containing a URI domain
BaLi_c00510	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
BaLi_c00520	COG2002	toxin-antitoxin pair type II binding
BaLi_c00530	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BaLi_c00530	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BaLi_c00540	COG0084	hydrolase, TatD family'
BaLi_c00550	COG3583	domain protein
BaLi_c00550	COG3584	3D domain protein
BaLi_c00560	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BaLi_c00570	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
BaLi_c00590	COG4466	Protein conserved in bacteria
BaLi_c00610	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
BaLi_c00620	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BaLi_c00630	COG0251	oxidation-reduction process
BaLi_c00640	COG2088	sporulation resulting in formation of a cellular spore
BaLi_c00650	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
BaLi_c00660	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
BaLi_c00670	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
BaLi_c00680	COG0193	aminoacyl-tRNA hydrolase activity
BaLi_c00700	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
BaLi_c00710	COG2002	toxin-antitoxin pair type II binding
BaLi_c00720	COG2244	polysaccharide biosynthetic process
BaLi_c00730	COG3956	TIGRFAM MazG family protein
BaLi_c00740	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
BaLi_c00770	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
BaLi_c00780	COG1098	S1 RNA binding domain
BaLi_c00810	COG2208	phosphoserine phosphatase activity
BaLi_c00820	COG2304	oxidoreductase activity
BaLi_c00830	COG0515	serine threonine protein kinase
BaLi_c00840	COG0037	tRNA processing
BaLi_c00860	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BaLi_c00870	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
BaLi_c00880	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
BaLi_c00890	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BaLi_c00900	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BaLi_c00910	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BaLi_c00920	COG0512	Glutamine amidotransferase of anthranilate synthase
BaLi_c00930	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BaLi_c00940	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
BaLi_c00950	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
BaLi_c00960	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
BaLi_c00970	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
BaLi_c00980	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
BaLi_c01020	COG4463	regulation of RNA biosynthetic process
BaLi_c01030	COG3880	PFAM UvrB UvrC protein
BaLi_c01040	COG3869	Catalyzes the specific phosphorylation of arginine residues in
BaLi_c01050	COG0542	response to heat
BaLi_c01060	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
BaLi_c01070	COG1623	Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c- di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation
BaLi_c01080	COG4956	integral membrane protein (PIN domain superfamily)
BaLi_c01090	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
BaLi_c01100	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
BaLi_c01110	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
BaLi_c01120	COG1045	serine acetyltransferase
BaLi_c01130	COG0215	cysteine-tRNA ligase activity
BaLi_c01140	COG1939	Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc)
BaLi_c01150	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BaLi_c01160	COG3688	RNA-binding protein containing a PIN domain
BaLi_c01200	COG0250	Participates in transcription elongation, termination and antitermination
BaLi_c01210	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
BaLi_c01220	COG0081	regulation of translation
BaLi_c01230	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
BaLi_c01240	COG0222	ribosome binding
BaLi_c01250	COG2813	Specifically methylates the guanine in position
BaLi_c01260	COG0085	RNA polymerase activity
BaLi_c01270	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
BaLi_c01280	COG1358	cellular component organization or biogenesis
BaLi_c01290	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
BaLi_c01300	COG0049	tRNA binding
BaLi_c01310	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
BaLi_c01320	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
BaLi_c01330	COG0051	transcription antitermination factor activity, RNA binding
BaLi_c01340	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
BaLi_c01350	COG0088	Forms part of the polypeptide exit tunnel
BaLi_c01360	COG0089	rRNA binding
BaLi_c01380	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
BaLi_c01390	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
BaLi_c01400	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
BaLi_c01410	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
BaLi_c01420	COG0255	Belongs to the universal ribosomal protein uL29 family
BaLi_c01430	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
BaLi_c01440	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
BaLi_c01450	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
BaLi_c01460	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
BaLi_c01470	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BaLi_c01480	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
BaLi_c01490	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
BaLi_c01500	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
BaLi_c01510	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
BaLi_c01520	COG1841	ribosomal large subunit assembly
BaLi_c01530	COG0200	Binds to the 23S rRNA
BaLi_c01540	COG0201	protein transport
BaLi_c01550	COG0563	adenylate kinase activity
BaLi_c01560	COG0024	Methionine aminopeptidase
BaLi_c01570	COG2163	COG2163 Ribosomal protein L14E L6E L27E
BaLi_c01580	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
BaLi_c01590	COG0257	Belongs to the bacterial ribosomal protein bL36 family
BaLi_c01600	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
BaLi_c01610	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
BaLi_c01620	COG0202	RNA polymerase activity
BaLi_c01630	COG0203	ribosomal protein L17
BaLi_c01640	COG1122	ATPase activity
BaLi_c01650	COG1122	ATPase activity
BaLi_c01660	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BaLi_c01670	COG0101	tRNA pseudouridine synthase activity
BaLi_c01680	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
BaLi_c01690	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
BaLi_c01730	COG2318	DinB family
BaLi_c01770	COG1131	(ABC) transporter
BaLi_c01830	COG2274	protein secretion by the type I secretion system
BaLi_c01880	COG3290	protein histidine kinase activity
BaLi_c01920	COG0860	N-Acetylmuramoyl-L-alanine amidase
BaLi_c01930	COG0489	protein tyrosine kinase activity
BaLi_c01950	COG2194	sulfuric ester hydrolase activity
BaLi_c01960	COG0726	polysaccharide deacetylase
BaLi_c02020	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BaLi_c02040	COG0385	Bile acid
BaLi_c02070	COG3876	Protein conserved in bacteria
BaLi_c02080	COG1472	Belongs to the glycosyl hydrolase 3 family
BaLi_c02090	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BaLi_c02100	COG1263	PTS System
BaLi_c02100	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c02110	COG1737	Transcriptional regulator
BaLi_c02120	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BaLi_c02130	COG1683	Conserved Protein
BaLi_c02200	COG1595	DNA-templated transcription, initiation
BaLi_c02210	COG5662	AntiSigma factor
BaLi_c02220	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
BaLi_c02230	COG4856	YbbR-like protein
BaLi_c02240	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BaLi_c02250	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
BaLi_c02290	COG1725	Transcriptional regulator
BaLi_c02300	COG0640	Transcriptional regulator
BaLi_c02310	COG2814	Major facilitator Superfamily
BaLi_c02320	COG1309	transcriptional regulator
BaLi_c02350	COG1132	(ABC) transporter
BaLi_c02360	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
BaLi_c02380	COG2312	Erythromycin esterase
BaLi_c02420	COG1011	Hydrolase
BaLi_c02460	COG2211	Major facilitator Superfamily
BaLi_c02500	COG1331	Highly conserved protein containing a thioredoxin domain
BaLi_c02510	COG0697	spore germination
BaLi_c02520	COG0789	Transcriptional regulator
BaLi_c02550	COG2226	methyltransferase
BaLi_c02580	COG0778	Nitroreductase
BaLi_c02590	COG1802	Transcriptional regulator
BaLi_c02600	COG0730	response to heat
BaLi_c02640	COG1283	sodium-dependent phosphate transmembrane transporter activity
BaLi_c02650	COG4682	membrane
BaLi_c02700	COG0697	spore germination
BaLi_c02710	COG1917	Cupin 2, conserved barrel domain protein
BaLi_c02710	COG2207	Transcriptional regulator
BaLi_c02760	COG0371	Dehydrogenase
BaLi_c02790	COG4257	antibiotic catabolic process
BaLi_c02810	COG0833	amino acid
BaLi_c02820	COG2040	homocysteine
BaLi_c02840	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c02840	COG1263	PTS System
BaLi_c02850	COG0789	Transcriptional regulator
BaLi_c02860	COG2323	membrane
BaLi_c02900	COG2205	protein histidine kinase activity
BaLi_c02910	COG1115	amino acid carrier protein
BaLi_c02920	COG2066	Belongs to the glutaminase family
BaLi_c02930	COG4191	Histidine kinase
BaLi_c02940	COG0784	Response regulator, receiver
BaLi_c02990	COG3540	Alkaline phosphatase
BaLi_c03000	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BaLi_c03010	COG0805	protein transport
BaLi_c03020	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BaLi_c03030	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c03040	COG2271	Major facilitator Superfamily
BaLi_c03050	COG4948	Mandelate Racemase Muconate Lactonizing
BaLi_c03060	COG2186	Transcriptional regulator
BaLi_c03070	COG2721	sulfolactate sulfo-lyase activity
BaLi_c03110	COG0745	RESPONSE REGULATOR receiver
BaLi_c03120	COG2205	protein histidine kinase activity
BaLi_c03130	COG1131	(ABC) transporter
BaLi_c03180	COG3173	Aminoglycoside phosphotransferase
BaLi_c03190	COG1846	Transcriptional regulator
BaLi_c03200	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c03240	COG0789	Transcriptional regulator
BaLi_c03280	COG0697	spore germination
BaLi_c03300	COG1405	negative regulation of cell septum assembly
BaLi_c03300	COG3012	SEC-C Motif Domain Protein
BaLi_c03360	COG0583	DNA-binding transcription factor activity
BaLi_c03370	COG1942	4-Oxalocrotonate Tautomerase
BaLi_c03380	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c03410	COG1288	antiporter activity
BaLi_c03430	COG0252	asparaginase activity
BaLi_c03440	COG0456	acetyltransferase
BaLi_c03460	COG1164	Oligoendopeptidase f
BaLi_c03470	COG2261	transglycosylase associated protein
BaLi_c03490	COG0247	lactate metabolic process
BaLi_c03500	COG0277	FAD linked oxidase domain protein
BaLi_c03510	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c03520	COG1447	Phosphotransferase system cellobiose-specific component IIA
BaLi_c03530	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c03540	COG1486	melibiose metabolic process
BaLi_c03560	COG3394	polysaccharide catabolic process
BaLi_c03590	COG3591	Belongs to the peptidase S1B family
BaLi_c03600	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c03620	COG1595	DNA-templated transcription, initiation
BaLi_c03640	COG3773	Cell wall hydrolase
BaLi_c03650	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BaLi_c03660	COG3883	PFAM NLP P60 protein
BaLi_c03660	COG0791	NLP P60 protein
BaLi_c03680	COG1131	(ABC) transporter
BaLi_c03690	COG1309	transcriptional regulator
BaLi_c03710	COG2310	stress, protein
BaLi_c03720	COG2310	stress, protein
BaLi_c03730	COG2310	stress, protein
BaLi_c03740	COG0861	Integral membrane protein TerC family
BaLi_c03780	COG3853	Toxic anion resistance protein (TelA)
BaLi_c03790	COG0785	Cytochrome C biogenesis protein
BaLi_c03810	COG2223	nitrite transmembrane transporter activity
BaLi_c03820	COG0039	L-malate dehydrogenase activity
BaLi_c03830	COG1620	l-lactate permease
BaLi_c03840	COG1280	lysine exporter protein (LysE YggA)
BaLi_c03850	COG1113	amino acid transport
BaLi_c03860	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
BaLi_c03870	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
BaLi_c03880	COG3541	Predicted nucleotidyltransferase
BaLi_c03890	COG0506	proline dehydrogenase activity
BaLi_c03900	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c03910	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c03920	COG2508	Transcriptional regulator
BaLi_c03930	COG3689	TIGRFAM TIGR03943 family protein
BaLi_c03940	COG0701	Predicted permease
BaLi_c03950	COG3458	cephalosporin-C deacetylase activity
BaLi_c03990	COG0765	amino acid transport
BaLi_c04000	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BaLi_c04010	COG2249	NAD(P)H dehydrogenase (quinone) activity
BaLi_c04020	COG1116	anion transmembrane transporter activity
BaLi_c04030	COG2723	6-phospho-beta-galactosidase activity
BaLi_c04050	COG3209	COG3209 Rhs family protein
BaLi_c04070	COG5444	nuclease activity
BaLi_c04120	COG1176	ABC-type spermidine putrescine transport system, permease component I
BaLi_c04130	COG1177	transmembrane transport
BaLi_c04140	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c04150	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c04170	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c04180	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
BaLi_c04190	COG0697	spore germination
BaLi_c04200	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c04220	COG2819	hydrolase of the alpha beta superfamily
BaLi_c04230	COG3708	Transcriptional regulator
BaLi_c04230	COG2207	Transcriptional regulator
BaLi_c04240	COG2364	Membrane
BaLi_c04300	COG1126	abc transporter atp-binding protein
BaLi_c04310	COG0765	amino acid transport
BaLi_c04320	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BaLi_c04330	COG3829	transcription factor binding
BaLi_c04340	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BaLi_c04350	COG0833	amino acid
BaLi_c04360	COG0010	Belongs to the arginase family
BaLi_c04370	COG0583	DNA-binding transcription factor activity
BaLi_c04380	COG0163	prenyltransferase activity
BaLi_c04390	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
BaLi_c04560	COG5444	nuclease activity
BaLi_c04600	COG2972	Histidine kinase
BaLi_c04610	COG4753	response regulator
BaLi_c04610	COG2207	Transcriptional regulator
BaLi_c04620	COG4213	ABC transporter substrate-binding protein
BaLi_c04640	COG4214	carbohydrate transport
BaLi_c04650	COG2271	Major facilitator Superfamily
BaLi_c04660	COG0456	acetyltransferase
BaLi_c04660	COG1846	Transcriptional regulator
BaLi_c04670	COG1874	Beta-galactosidase
BaLi_c04690	COG4247	3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase)
BaLi_c04710	COG3104	oligopeptide transport
BaLi_c04720	COG5434	Belongs to the glycosyl hydrolase 28 family
BaLi_c04740	COG0697	spore germination
BaLi_c04760	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
BaLi_c04770	COG0789	Transcriptional regulator
BaLi_c04780	COG1136	(ABC) transporter
BaLi_c04790	COG0577	efflux transmembrane transporter activity
BaLi_c04800	COG0745	RESPONSE REGULATOR receiver
BaLi_c04810	COG3850	Histidine kinase
BaLi_c04810	COG5002	protein histidine kinase activity
BaLi_c04820	COG0840	transmembrane signaling receptor activity
BaLi_c04830	COG0527	aspartate kinase activity
BaLi_c04840	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c04850	COG4605	iron ion homeostasis
BaLi_c04860	COG4604	ABC transporter, ATP-binding protein
BaLi_c04870	COG4607	ABC-type enterochelin transport system periplasmic component
BaLi_c04880	COG2814	Major facilitator Superfamily
BaLi_c04890	COG1309	transcriptional regulator
BaLi_c04910	COG0778	Nitroreductase
BaLi_c04920	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BaLi_c04930	COG0640	Transcriptional regulator
BaLi_c04940	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c04950	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
BaLi_c04960	COG0531	amino acid
BaLi_c04970	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c04980	COG0697	spore germination
BaLi_c05000	COG4549	nuclear export factor GLE1
BaLi_c05010	COG1276	copper resistance
BaLi_c05010	COG2372	response to copper ion
BaLi_c05020	COG1349	DNA-binding transcription factor activity
BaLi_c05030	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BaLi_c05040	COG0243	molybdopterin cofactor binding
BaLi_c05050	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BaLi_c05060	COG2146	nitrite reductase [NAD(P)H] activity
BaLi_c05070	COG1587	Uroporphyrinogen-III synthase
BaLi_c05070	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BaLi_c05080	COG1802	Transcriptional regulator
BaLi_c05090	COG0471	metal ion transport
BaLi_c05100	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BaLi_c05120	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c05150	COG3959	Transketolase, thiamine diphosphate binding domain
BaLi_c05160	COG3958	Transketolase
BaLi_c05170	COG0561	phosphatase activity
BaLi_c05180	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
BaLi_c05190	COG1914	H( )-stimulated, divalent metal cation uptake system
BaLi_c05200	COG4336	lyase activity
BaLi_c05210	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
BaLi_c05220	COG1984	allophanate hydrolase subunit 2
BaLi_c05230	COG1414	Transcriptional regulator
BaLi_c05240	COG2755	lipolytic protein G-D-S-L family
BaLi_c05260	COG2213	PTS system mannitol-specific
BaLi_c05270	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c05280	COG0246	Mannitol dehydrogenase
BaLi_c05290	COG3711	transcriptional antiterminator
BaLi_c05300	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c05310	COG1917	Cupin 2, conserved barrel domain protein
BaLi_c05330	COG3871	stress protein (general stress protein 26)
BaLi_c05360	COG1316	TRANSCRIPTIONal
BaLi_c05370	COG2814	Major facilitator Superfamily
BaLi_c05390	COG1522	sequence-specific DNA binding
BaLi_c05400	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BaLi_c05400	COG0551	DNA topoisomerase type I activity
BaLi_c05410	COG0287	Prephenate dehydrogenase
BaLi_c05420	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BaLi_c05420	COG0512	Glutamine amidotransferase of anthranilate synthase
BaLi_c05430	COG1605	Chorismate mutase
BaLi_c05450	COG0028	Belongs to the TPP enzyme family
BaLi_c05460	COG3397	chitin binding
BaLi_c05480	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BaLi_c05490	COG1914	H( )-stimulated, divalent metal cation uptake system
BaLi_c05500	COG2261	transglycosylase associated protein
BaLi_c05510	COG1027	Aspartate ammonia-lyase
BaLi_c05520	COG1819	glycosyl
BaLi_c05530	COG4876	unkown
BaLi_c05540	COG2217	Heavy metal translocating P-type atpase
BaLi_c05560	COG0662	Cupin 2, conserved barrel domain protein
BaLi_c05580	COG0628	permease
BaLi_c05590	COG1301	dicarboxylic acid transport
BaLi_c05600	COG1131	(ABC) transporter
BaLi_c05610	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BaLi_c05630	COG1960	acyl-CoA dehydrogenase activity
BaLi_c05640	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c05650	COG1181	Belongs to the D-alanine--D-alanine ligase family
BaLi_c05660	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
BaLi_c05680	COG0513	Belongs to the DEAD box helicase family
BaLi_c05690	COG3402	PFAM membrane-flanked domain
BaLi_c05700	COG3428	Bacterial PH domain
BaLi_c05710	COG0705	Rhomboid family
BaLi_c05720	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
BaLi_c05730	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BaLi_c05740	COG0864	Transcriptional regulator
BaLi_c05750	COG2337	Toxic component of a toxin-antitoxin (TA) module
BaLi_c05760	COG1366	Belongs to the anti-sigma-factor antagonist family
BaLi_c05770	COG1366	Belongs to the anti-sigma-factor antagonist family
BaLi_c05780	COG2172	sigma factor antagonist activity
BaLi_c05790	COG2208	phosphoserine phosphatase activity
BaLi_c05820	COG1191	sigma factor activity
BaLi_c05830	COG2208	phosphoserine phosphatase activity
BaLi_c05840	COG2183	response to ionizing radiation
BaLi_c05850	COG1309	transcriptional regulator
BaLi_c05870	COG1033	growth of symbiont in host cell
BaLi_c05870	COG2409	Drug exporters of the RND superfamily
BaLi_c05890	COG3091	SprT-like family
BaLi_c05970	COG0726	polysaccharide deacetylase
BaLi_c06000	COG1476	TRANSCRIPTIONal
BaLi_c06010	COG3239	Fatty acid desaturase
BaLi_c06020	COG1278	Cold shock
BaLi_c06100	COG2364	Membrane
BaLi_c06110	COG1846	Transcriptional regulator
BaLi_c06120	COG0456	acetyltransferase
BaLi_c06130	COG2808	Putative FMN-binding domain
BaLi_c06150	COG1733	regulation of RNA biosynthetic process
BaLi_c06160	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c06230	COG3545	Serine hydrolase
BaLi_c06240	COG1733	regulation of RNA biosynthetic process
BaLi_c06270	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
BaLi_c06280	COG1113	amino acid transport
BaLi_c06330	COG0596	Alpha beta hydrolase
BaLi_c06340	COG5566	PFAM Mor transcription activator
BaLi_c06360	COG1595	DNA-templated transcription, initiation
BaLi_c06380	COG1835	transferase activity, transferring acyl groups other than amino-acyl groups
BaLi_c06380	COG2755	lipolytic protein G-D-S-L family
BaLi_c06390	COG0494	nUDIX hydrolase
BaLi_c06400	COG2814	Major facilitator Superfamily
BaLi_c06410	COG1979	alcohol dehydrogenase
BaLi_c06420	COG2972	Histidine kinase
BaLi_c06420	COG0745	RESPONSE REGULATOR receiver
BaLi_c06430	COG3279	Response regulator of the LytR AlgR family
BaLi_c06450	COG3764	Sortase (surface protein transpeptidase)
BaLi_c06470	COG2814	Major facilitator Superfamily
BaLi_c06550	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
BaLi_c06560	COG0802	atpase or kinase
BaLi_c06570	COG1214	PFAM Peptidase M22, glycoprotease
BaLi_c06580	COG0456	acetyltransferase
BaLi_c06590	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
BaLi_c06600	COG0488	(ABC) transporter
BaLi_c06610	COG0315	cyclic pyranopterin monophosphate synthase activity
BaLi_c06620	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
BaLi_c06630	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
BaLi_c06640	COG0805	protein transport
BaLi_c06660	COG1266	CAAX protease self-immunity
BaLi_c06670	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
BaLi_c06680	COG0459	protein refolding
BaLi_c06690	COG4974	Belongs to the 'phage' integrase family
BaLi_c06700	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BaLi_c07040	COG5280	Phage tail tape measure protein TP901
BaLi_c07040	COG3953	SLT domain
BaLi_c07170	COG2720	vancomycin resistance protein
BaLi_c07200	COG2135	peptidase activity
BaLi_c07220	COG1309	transcriptional regulator
BaLi_c07230	COG0574	Belongs to the PEP-utilizing enzyme family
BaLi_c07230	COG3848	Pyruvate phosphate dikinase
BaLi_c07260	COG3967	Belongs to the short-chain dehydrogenases reductases (SDR) family
BaLi_c07270	COG2272	Belongs to the type-B carboxylesterase lipase family
BaLi_c07280	COG2814	Major facilitator Superfamily
BaLi_c07290	COG1842	Phage shock protein A
BaLi_c07300	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BaLi_c07310	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
BaLi_c07320	COG4260	virion core protein, lumpy skin disease virus
BaLi_c07340	COG1378	Sugar-specific transcriptional regulator TrmB
BaLi_c07350	COG1280	lysine exporter protein (LysE YggA)
BaLi_c07360	COG3339	Conserved Protein
BaLi_c07370	COG0772	Belongs to the SEDS family
BaLi_c07380	COG0772	Belongs to the SEDS family
BaLi_c07440	COG0726	polysaccharide deacetylase
BaLi_c07460	COG1609	Transcriptional regulator
BaLi_c07470	COG0366	Alpha amylase catalytic
BaLi_c07480	COG2182	Extracellular solute-binding protein
BaLi_c07490	COG1175	transmembrane transport
BaLi_c07500	COG3833	ABC-type maltose transport systems, permease component
BaLi_c07510	COG5521	maltodextrose utilization protein MalA
BaLi_c07520	COG1554	hydrolase, family 65, central catalytic
BaLi_c07530	COG0366	Alpha amylase catalytic
BaLi_c07540	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BaLi_c07550	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BaLi_c07560	COG1846	Transcriptional regulator
BaLi_c07590	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
BaLi_c07600	COG0823	Involved in the tonB-independent uptake of proteins
BaLi_c07660	COG0702	epimerase
BaLi_c07680	COG2132	Multicopper oxidase
BaLi_c07710	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
BaLi_c07720	COG0714	Associated with various cellular activities
BaLi_c07730	COG1721	protein (some members contain a von Willebrand factor type A (vWA) domain
BaLi_c07740	COG1305	Transglutaminase-like
BaLi_c07750	COG0518	GMP synthase (glutamine-hydrolyzing) activity
BaLi_c07750	COG0519	Catalyzes the synthesis of GMP from XMP
BaLi_c07770	COG2252	PERMEase
BaLi_c07800	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
BaLi_c07820	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
BaLi_c07840	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
BaLi_c07850	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
BaLi_c07860	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
BaLi_c07870	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BaLi_c07880	COG0047	phosphoribosylformylglycinamidine synthase activity
BaLi_c07890	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
BaLi_c07900	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
BaLi_c07910	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
BaLi_c07920	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
BaLi_c07930	COG0138	bifunctional purine biosynthesis protein purh
BaLi_c07940	COG0151	Belongs to the GarS family
BaLi_c07960	COG2124	cytochrome p450
BaLi_c08000	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BaLi_c08010	COG1470	cell adhesion involved in biofilm formation
BaLi_c08020	COG4496	protein, YerC YecD
BaLi_c08030	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
BaLi_c08040	COG0210	DNA helicase
BaLi_c08050	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
BaLi_c08060	COG4851	CamS sex pheromone cAM373 precursor
BaLi_c08070	COG2188	Transcriptional regulator
BaLi_c08110	COG1735	metal-dependent hydrolase with the TIM-barrel fold
BaLi_c08120	COG0626	cystathionine gamma-synthase activity
BaLi_c08130	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BaLi_c08140	COG3457	Alanine racemase
BaLi_c08150	COG0363	glucosamine-6-phosphate deaminase activity
BaLi_c08160	COG1285	pathogenesis
BaLi_c08170	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c08180	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BaLi_c08190	COG0154	amidase activity
BaLi_c08200	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
BaLi_c08230	COG4124	Belongs to the glycosyl hydrolase 26 family
BaLi_c08240	COG1309	transcriptional regulator
BaLi_c08250	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
BaLi_c08270	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BaLi_c08280	COG1957	nucleoside hydrolase
BaLi_c08290	COG1597	lipid kinase activity
BaLi_c08300	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BaLi_c08360	COG2723	6-phospho-beta-galactosidase activity
BaLi_c08370	COG3711	transcriptional antiterminator
BaLi_c08380	COG0457	Tetratricopeptide repeat
BaLi_c08400	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
BaLi_c08400	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BaLi_c08410	COG3586	endonuclease activity
BaLi_c08420	COG0697	spore germination
BaLi_c08430	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c08440	COG0697	spore germination
BaLi_c08450	COG0217	transcriptional regulatory protein
BaLi_c08520	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c08530	COG0840	transmembrane signaling receptor activity
BaLi_c08540	COG0109	protoheme IX farnesyltransferase activity
BaLi_c08550	COG1309	transcriptional regulator
BaLi_c08560	COG0471	metal ion transport
BaLi_c08570	COG0488	(ABC) transporter
BaLi_c08580	COG0583	DNA-binding transcription factor activity
BaLi_c08600	COG1469	GTP cyclohydrolase I activity
BaLi_c08630	COG0523	cobalamin synthesis protein
BaLi_c08640	COG1424	Catalyzes the transformation of pimelate into pimeloyl- CoA with concomitant hydrolysis of ATP to AMP
BaLi_c08650	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BaLi_c08660	COG0156	8-amino-7-oxononanoate synthase activity
BaLi_c08670	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
BaLi_c08680	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
BaLi_c08690	COG2124	cytochrome p450
BaLi_c08710	COG0789	Transcriptional regulator
BaLi_c08720	COG2814	Major facilitator Superfamily
BaLi_c08730	COG0488	(ABC) transporter
BaLi_c08740	COG0513	Belongs to the DEAD box helicase family
BaLi_c08750	COG2130	NADP-dependent
BaLi_c08780	COG0471	metal ion transport
BaLi_c08840	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c08860	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
BaLi_c08870	COG3858	chitin binding
BaLi_c08880	COG5658	integral membrane protein
BaLi_c08890	COG0640	Transcriptional regulator
BaLi_c08900	COG1254	Belongs to the acylphosphatase family
BaLi_c08910	COG2258	MOSC domain
BaLi_c08940	COG0024	Methionine aminopeptidase
BaLi_c08950	COG1368	sulfuric ester hydrolase activity
BaLi_c08980	COG1115	amino acid carrier protein
BaLi_c08990	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c08990	COG1263	PTS System
BaLi_c09000	COG0366	Alpha amylase catalytic
BaLi_c09010	COG2188	Transcriptional regulator
BaLi_c09060	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BaLi_c09070	COG1045	serine acetyltransferase
BaLi_c09080	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BaLi_c09100	COG1215	transferase activity, transferring glycosyl groups
BaLi_c09110	COG0463	Glycosyl transferase, family 2
BaLi_c09110	COG0457	Tetratricopeptide repeat
BaLi_c09130	COG0673	inositol 2-dehydrogenase activity
BaLi_c09160	COG1733	regulation of RNA biosynthetic process
BaLi_c09170	COG0778	Nitroreductase
BaLi_c09180	COG0737	Belongs to the 5'-nucleotidase family
BaLi_c09190	COG0693	protein deglycase activity
BaLi_c09200	COG4840	Belongs to the UPF0435 family
BaLi_c09210	COG1115	amino acid carrier protein
BaLi_c09220	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BaLi_c09230	COG4980	gas vesicle protein
BaLi_c09240	COG1295	ribonuclease BN
BaLi_c09250	COG0477	Major facilitator Superfamily
BaLi_c09270	COG0387	Pfam Sodium calcium exchanger
BaLi_c09290	COG0535	radical SAM domain protein
BaLi_c09310	COG0726	polysaccharide deacetylase
BaLi_c09320	COG0371	Dehydrogenase
BaLi_c09340	COG0598	Magnesium transport protein CorA
BaLi_c09350	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
BaLi_c09360	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
BaLi_c09370	COG4637	Psort location Cytoplasmic, score
BaLi_c09420	COG1819	glycosyl
BaLi_c09440	COG0477	Major facilitator Superfamily
BaLi_c09460	COG1263	PTS System
BaLi_c09460	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c09470	COG3711	transcriptional antiterminator
BaLi_c09480	COG0288	reversible hydration of carbon dioxide
BaLi_c09490	COG3002	Belongs to the UPF0753 family
BaLi_c09500	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BaLi_c09510	COG5609	conserved protein (DUF2294)
BaLi_c09530	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BaLi_c09540	COG0022	dehydrogenase e1 component
BaLi_c09550	COG0508	dehydrogenase complex catalyzes the overall conversion of
BaLi_c09560	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BaLi_c09570	COG3284	Transcriptional regulator
BaLi_c09580	COG1742	UPF0060 membrane protein
BaLi_c09590	COG1486	melibiose metabolic process
BaLi_c09600	COG1737	Transcriptional regulator
BaLi_c09610	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c09610	COG1263	PTS System
BaLi_c09640	COG1733	regulation of RNA biosynthetic process
BaLi_c09650	COG2259	Doxx family
BaLi_c09660	COG2514	catechol 2,3-dioxygenase activity
BaLi_c09680	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c09700	COG1653	transport
BaLi_c09710	COG2249	NAD(P)H dehydrogenase (quinone) activity
BaLi_c09720	COG1051	belongs to the nudix hydrolase family
BaLi_c09740	COG0392	lysyltransferase activity
BaLi_c09740	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
BaLi_c09750	COG0384	phenazine biosynthesis protein PhzF
BaLi_c09760	COG0778	Nitroreductase
BaLi_c09790	COG1090	epimerase
BaLi_c09800	COG2137	regulation of response to DNA damage stimulus
BaLi_c09850	COG0463	Glycosyl transferase, family 2
BaLi_c09870	COG4485	Bacterial membrane protein, YfhO
BaLi_c09880	COG1988	membrane-bound metal-dependent
BaLi_c09890	COG1194	a g-specific adenine glycosylase
BaLi_c09910	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c09940	COG3557	Belongs to the UPF0374 family
BaLi_c09950	COG1132	(ABC) transporter
BaLi_c09960	COG0444	Belongs to the ABC transporter superfamily
BaLi_c09970	COG4608	Belongs to the ABC transporter superfamily
BaLi_c09980	COG0747	negative chemotaxis
BaLi_c10020	COG4129	membrane
BaLi_c10030	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BaLi_c10040	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
BaLi_c10050	COG0735	belongs to the Fur family
BaLi_c10270	COG0457	Tetratricopeptide repeat
BaLi_c10300	COG5444	nuclease activity
BaLi_c10330	COG0732	type I restriction modification DNA specificity domain
BaLi_c10340	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BaLi_c10380	COG0710	3-dehydroquinate dehydratase activity
BaLi_c10390	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
BaLi_c10400	COG1116	anion transmembrane transporter activity
BaLi_c10410	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BaLi_c10420	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BaLi_c10430	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BaLi_c10450	COG1476	TRANSCRIPTIONal
BaLi_c10480	COG1131	(ABC) transporter
BaLi_c10510	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BaLi_c10540	COG3382	B3 4 domain protein
BaLi_c10550	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
BaLi_c10570	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
BaLi_c10580	COG0789	Transcriptional regulator
BaLi_c10590	COG1664	Polymer-forming cytoskeletal
BaLi_c10600	COG1664	Polymer-forming cytoskeletal
BaLi_c10620	COG2766	serine protein kinase
BaLi_c10630	COG2718	Belongs to the UPF0229 family
BaLi_c10640	COG1566	PFAM secretion protein HlyD family protein
BaLi_c10650	COG2814	Major facilitator Superfamily
BaLi_c10660	COG0655	NAD(P)H dehydrogenase (quinone) activity
BaLi_c10690	COG1131	(ABC) transporter
BaLi_c10700	COG1131	(ABC) transporter
BaLi_c10710	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BaLi_c10720	COG1278	Cold shock
BaLi_c10730	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BaLi_c10740	COG2011	ABC-type metal ion transport system permease component
BaLi_c10750	COG1464	Belongs to the NlpA lipoprotein family
BaLi_c10760	COG1823	symporter activity
BaLi_c10810	COG5577	PFAM Coat F domain
BaLi_c10830	COG5002	protein histidine kinase activity
BaLi_c10840	COG0737	Belongs to the 5'-nucleotidase family
BaLi_c10840	COG4085	toxin activity
BaLi_c10840	COG1525	nuclease
BaLi_c10850	COG3764	Sortase (surface protein transpeptidase)
BaLi_c10860	COG0564	pseudouridine synthase activity
BaLi_c10880	COG0517	IMP dehydrogenase activity
BaLi_c10890	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
BaLi_c10900	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BaLi_c10900	COG3153	acetyltransferase
BaLi_c10920	COG0488	(ABC) transporter
BaLi_c10940	COG2116	formate transmembrane transporter activity
BaLi_c10970	COG0604	alcohol dehydrogenase
BaLi_c10980	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
BaLi_c10990	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
BaLi_c11000	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
BaLi_c11010	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
BaLi_c11020	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
BaLi_c11050	COG2203	Gaf domain
BaLi_c11050	COG4585	Histidine kinase
BaLi_c11060	COG2197	response regulator
BaLi_c11070	COG0431	NADPH-dependent FMN reductase
BaLi_c11100	COG1959	2 iron, 2 sulfur cluster binding
BaLi_c11110	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
BaLi_c11110	COG1017	nitric oxide dioxygenase activity
BaLi_c11120	COG2719	SpoVR family
BaLi_c11130	COG1388	LysM domain
BaLi_c11130	COG0791	NLP P60 protein
BaLi_c11140	COG0583	DNA-binding transcription factor activity
BaLi_c11150	COG0372	Belongs to the citrate synthase family
BaLi_c11160	COG2133	pyrroloquinoline quinone binding
BaLi_c11170	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c11180	COG0733	neurotransmitter:sodium symporter activity
BaLi_c11250	COG2207	Transcriptional regulator
BaLi_c11250	COG3708	Transcriptional regulator
BaLi_c11260	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c11300	COG1595	DNA-templated transcription, initiation
BaLi_c11310	COG0662	Cupin 2, conserved barrel domain protein
BaLi_c11320	COG0667	Aldo Keto reductase
BaLi_c11330	COG0204	Acyl-transferase
BaLi_c11340	COG3152	Membrane
BaLi_c11370	COG1253	flavin adenine dinucleotide binding
BaLi_c11380	COG0789	Transcriptional regulator
BaLi_c11400	COG1253	flavin adenine dinucleotide binding
BaLi_c11440	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BaLi_c11450	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
BaLi_c11460	COG0584	glycerophosphoryl diester phosphodiesterase
BaLi_c11480	COG0668	transmembrane transport
BaLi_c11490	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
BaLi_c11510	COG0726	polysaccharide deacetylase
BaLi_c11530	COG1757	Na H antiporter
BaLi_c11540	COG2017	converts alpha-aldose to the beta-anomer
BaLi_c11610	COG0589	response to stress
BaLi_c11640	COG1132	(ABC) transporter
BaLi_c11650	COG1132	(ABC) transporter
BaLi_c11660	COG0702	epimerase
BaLi_c11700	COG3842	ATPase activity
BaLi_c11710	COG2508	Transcriptional regulator
BaLi_c11730	COG0189	ligase activity
BaLi_c11740	COG0189	ligase activity
BaLi_c11750	COG4399	Belongs to the UPF0754 family
BaLi_c11760	COG3679	Belongs to the UPF0342 family
BaLi_c11790	COG0561	phosphatase activity
BaLi_c11800	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BaLi_c11810	COG0475	glutathione-regulated potassium exporter activity
BaLi_c11820	COG0490	domain, Protein
BaLi_c11840	COG1024	Enoyl-CoA hydratase
BaLi_c11850	COG0457	Tetratricopeptide repeat
BaLi_c11880	COG4152	abc transporter atp-binding protein
BaLi_c11890	COG1668	transmembrane transport
BaLi_c11900	COG0420	3'-5' exonuclease activity
BaLi_c11910	COG4717	serine-type aminopeptidase activity
BaLi_c11920	COG3481	metal-dependent phosphohydrolase, HD sub domain
BaLi_c11940	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
BaLi_c12000	COG1846	Transcriptional regulator
BaLi_c12010	COG4980	gas vesicle protein
BaLi_c12040	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
BaLi_c12050	COG0537	adenosine 5'-monophosphoramidase activity
BaLi_c12060	COG1131	(ABC) transporter
BaLi_c12070	COG4473	ABC transporter
BaLi_c12090	COG1473	amidohydrolase
BaLi_c12100	COG3069	C4-dicarboxylate transmembrane transporter activity
BaLi_c12110	COG2329	Antibiotic biosynthesis monooxygenase
BaLi_c12120	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BaLi_c12130	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
BaLi_c12160	COG1309	transcriptional regulator
BaLi_c12170	COG1511	domain protein
BaLi_c12180	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BaLi_c12190	COG1363	Peptidase, m42
BaLi_c12210	COG1301	dicarboxylic acid transport
BaLi_c12230	COG1234	tRNA 3'-trailer cleavage
BaLi_c12240	COG0095	Lipoate-protein ligase
BaLi_c12250	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c12270	COG1396	sequence-specific DNA binding
BaLi_c12300	COG0501	Belongs to the peptidase M48B family
BaLi_c12320	COG0697	spore germination
BaLi_c12330	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
BaLi_c12340	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c12350	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c12360	COG0406	alpha-ribazole phosphatase activity
BaLi_c12370	COG0840	transmembrane signaling receptor activity
BaLi_c12380	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BaLi_c12380	COG0723	plastoquinol--plastocyanin reductase activity
BaLi_c12390	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c12410	COG4903	ComK protein
BaLi_c12430	COG0398	Pfam SNARE associated Golgi protein
BaLi_c12440	COG0681	Belongs to the peptidase S26 family
BaLi_c12450	COG1404	Belongs to the peptidase S8 family
BaLi_c12470	COG2508	Transcriptional regulator
BaLi_c12490	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BaLi_c12520	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BaLi_c12530	COG3257	ureidoglycine aminohydrolase activity
BaLi_c12540	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BaLi_c12550	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
BaLi_c12560	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BaLi_c12570	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BaLi_c12590	COG0549	Belongs to the carbamate kinase family
BaLi_c12620	COG0457	Tetratricopeptide repeat
BaLi_c12680	COG1486	melibiose metabolic process
BaLi_c12690	COG3180	Ammonia monooxygenase
BaLi_c12720	COG3546	catalase activity
BaLi_c12730	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c12740	COG2814	Major facilitator Superfamily
BaLi_c12740	COG0477	Major facilitator Superfamily
BaLi_c12750	COG4533	DNA binding
BaLi_c12770	COG5002	protein histidine kinase activity
BaLi_c12780	COG0745	RESPONSE REGULATOR receiver
BaLi_c12800	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BaLi_c12810	COG0725	ABC transporter, periplasmic molybdate-binding protein
BaLi_c12820	COG4149	molybdate abc transporter
BaLi_c12830	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
BaLi_c12840	COG1074	ATP-dependent DNA helicase activity
BaLi_c12850	COG0420	3'-5' exonuclease activity
BaLi_c12860	COG0419	ATPase involved in DNA repair
BaLi_c12940	COG5337	Spore coat protein CotH
BaLi_c12960	COG0179	Fumarylacetoacetate (FAA) hydrolase
BaLi_c13020	COG0367	asparagine synthase
BaLi_c13030	COG0004	ammonium transporteR
BaLi_c13040	COG0347	Belongs to the P(II) protein family
BaLi_c13050	COG0534	Mate efflux family protein
BaLi_c13060	COG2207	Transcriptional regulator
BaLi_c13060	COG1917	Cupin 2, conserved barrel domain protein
BaLi_c13080	COG1609	Transcriptional regulator
BaLi_c13090	COG0673	inositol 2-dehydrogenase activity
BaLi_c13120	COG0697	spore germination
BaLi_c13130	COG1279	arginine transmembrane transporter activity
BaLi_c13140	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c13160	COG0076	glutamate decarboxylase activity
BaLi_c13210	COG2153	protein acetylation
BaLi_c13220	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c13230	COG2378	regulation of single-species biofilm formation
BaLi_c13240	COG0646	methionine synthase
BaLi_c13240	COG1410	methionine synthase
BaLi_c13250	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
BaLi_c13250	COG0646	methionine synthase
BaLi_c13260	COG1666	GTP binding
BaLi_c13270	COG2996	Protein conserved in bacteria
BaLi_c13300	COG1307	EDD domain protein, DegV family
BaLi_c13310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c13330	COG0516	GMP reductase activity
BaLi_c13350	COG0561	phosphatase activity
BaLi_c13360	COG1073	alpha beta
BaLi_c13370	COG2151	metal-sulfur cluster biosynthetic enzyme
BaLi_c13380	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
BaLi_c13390	COG1364	Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis the synthesis of N- acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate
BaLi_c13400	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
BaLi_c13410	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
BaLi_c13420	COG0505	Belongs to the CarA family
BaLi_c13430	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BaLi_c13440	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BaLi_c13450	COG1968	undecaprenyl-diphosphatase activity
BaLi_c13480	COG2267	carboxylic ester hydrolase activity
BaLi_c13500	COG1744	ABC transporter substrate-binding protein PnrA-like
BaLi_c13530	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BaLi_c13540	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
BaLi_c13550	COG5504	Zn-dependent protease
BaLi_c13560	COG0444	Belongs to the ABC transporter superfamily
BaLi_c13570	COG4608	Belongs to the ABC transporter superfamily
BaLi_c13590	COG0601	transmembrane transport
BaLi_c13600	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BaLi_c13630	COG0180	Tryptophanyl-tRNA synthetase
BaLi_c13650	COG4166	transmembrane transport
BaLi_c13660	COG0601	transmembrane transport
BaLi_c13670	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BaLi_c13680	COG0444	Belongs to the ABC transporter superfamily
BaLi_c13690	COG4608	Belongs to the ABC transporter superfamily
BaLi_c13700	COG0456	acetyltransferase
BaLi_c13710	COG1393	Belongs to the ArsC family
BaLi_c13720	COG0861	Integral membrane protein TerC family
BaLi_c13730	COG4862	establishment of competence for transformation
BaLi_c13780	COG4565	transcriptional regulatory protein
BaLi_c13790	COG3290	protein histidine kinase activity
BaLi_c13800	COG4469	Competence protein
BaLi_c13810	COG1164	Oligoendopeptidase f
BaLi_c13840	COG2346	COG2346, Truncated hemoglobins
BaLi_c13860	COG0741	lytic transglycosylase activity
BaLi_c13870	COG4116	CYTH
BaLi_c13890	COG2357	RelA SpoT domain protein
BaLi_c13900	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BaLi_c13910	COG0564	pseudouridine synthase activity
BaLi_c13920	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
BaLi_c13930	COG0569	domain protein
BaLi_c13930	COG0475	glutathione-regulated potassium exporter activity
BaLi_c13940	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BaLi_c13950	COG0352	thiamine-phosphate diphosphorylase activity
BaLi_c13970	COG2104	thiamine diphosphate biosynthetic process
BaLi_c13980	COG2022	thiamine diphosphate biosynthetic process
BaLi_c13990	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BaLi_c14000	COG0351	phosphomethylpyrimidine kinase
BaLi_c14010	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
BaLi_c14130	COG0210	DNA helicase
BaLi_c14150	COG0586	Pfam SNARE associated Golgi protein
BaLi_c14160	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BaLi_c14170	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BaLi_c14180	COG2246	polysaccharide biosynthetic process
BaLi_c14190	COG2153	protein acetylation
BaLi_c14200	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BaLi_c14210	COG2382	esterase
BaLi_c14250	COG0626	cystathionine gamma-synthase activity
BaLi_c14260	COG0626	cystathionine gamma-synthase activity
BaLi_c14270	COG5505	Protein of unknown function (DUF819)
BaLi_c14300	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BaLi_c14320	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c14440	COG0110	maltose O-acetyltransferase activity
BaLi_c14460	COG0583	DNA-binding transcription factor activity
BaLi_c14470	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BaLi_c14480	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
BaLi_c14490	COG0583	DNA-binding transcription factor activity
BaLi_c14500	COG0697	spore germination
BaLi_c14510	COG0346	lactoylglutathione lyase activity
BaLi_c14530	COG3584	3D domain protein
BaLi_c14530	COG1388	LysM domain
BaLi_c14540	COG2814	Major facilitator Superfamily
BaLi_c14550	COG1309	transcriptional regulator
BaLi_c14580	COG4195	phage-related replication protein
BaLi_c14590	COG2856	Zn peptidase
BaLi_c14600	COG1396	sequence-specific DNA binding
BaLi_c14630	COG1522	sequence-specific DNA binding
BaLi_c14640	COG1484	DNA-dependent DNA replication
BaLi_c14670	COG1595	DNA-templated transcription, initiation
BaLi_c14680	COG5484	DNA packaging
BaLi_c14680	COG3728	DNA packaging
BaLi_c14690	COG1783	phage Terminase large subunit
BaLi_c14700	COG5518	Phage portal protein
BaLi_c14710	COG0338	D12 class N6 adenine-specific DNA methyltransferase
BaLi_c14720	COG4653	Phage capsid family
BaLi_c14820	COG3953	SLT domain
BaLi_c14820	COG5280	Phage tail tape measure protein TP901
BaLi_c14830	COG1652	LysM domain
BaLi_c14840	COG4193	domain, Protein
BaLi_c14860	COG3628	GPW Gp25 family protein
BaLi_c14870	COG3299	homolog of phage Mu protein gp47
BaLi_c14880	COG3778	Protein conserved in bacteria
BaLi_c14930	COG3594	Acyltransferase
BaLi_c14950	COG1802	Transcriptional regulator
BaLi_c14960	COG1063	alcohol dehydrogenase
BaLi_c14970	COG1312	Catalyzes the dehydration of D-mannonate
BaLi_c14980	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c14990	COG1063	alcohol dehydrogenase
BaLi_c15000	COG2271	Major facilitator Superfamily
BaLi_c15030	COG0306	phosphate transporter
BaLi_c15040	COG1392	Phosphate transport regulator
BaLi_c15060	COG0405	Gamma-glutamyltransferase
BaLi_c15070	COG5578	integral membrane protein
BaLi_c15080	COG2972	Histidine kinase
BaLi_c15090	COG4753	response regulator
BaLi_c15090	COG2207	Transcriptional regulator
BaLi_c15100	COG1653	transport
BaLi_c15110	COG1175	transmembrane transport
BaLi_c15120	COG0395	ABC-type sugar transport system, permease component
BaLi_c15130	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BaLi_c15140	COG2207	Transcriptional regulator
BaLi_c15150	COG2755	lipolytic protein G-D-S-L family
BaLi_c15170	COG5578	integral membrane protein
BaLi_c15180	COG3401	FG-GAP repeat protein
BaLi_c15190	COG2755	lipolytic protein G-D-S-L family
BaLi_c15200	COG3401	FG-GAP repeat protein
BaLi_c15210	COG0667	Aldo Keto reductase
BaLi_c15220	COG2755	lipolytic protein G-D-S-L family
BaLi_c15230	COG1874	Beta-galactosidase
BaLi_c15250	COG1653	transport
BaLi_c15260	COG4209	transmembrane transport
BaLi_c15270	COG0395	ABC-type sugar transport system, permease component
BaLi_c15280	COG0531	amino acid
BaLi_c15290	COG0346	lactoylglutathione lyase activity
BaLi_c15300	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BaLi_c15310	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BaLi_c15330	COG2362	D-Aminopeptidase
BaLi_c15340	COG0601	transmembrane transport
BaLi_c15350	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BaLi_c15360	COG0444	Belongs to the ABC transporter superfamily
BaLi_c15370	COG4166	transmembrane transport
BaLi_c15380	COG1619	proteins homologs of microcin C7 resistance protein MccF
BaLi_c15390	COG4948	Mandelate Racemase Muconate Lactonizing
BaLi_c15400	COG0791	NLP P60 protein
BaLi_c15410	COG4608	Belongs to the ABC transporter superfamily
BaLi_c15430	COG1834	amidinotransferase
BaLi_c15440	COG2323	membrane
BaLi_c15450	COG3866	Pectate lyase
BaLi_c15490	COG2318	DinB family
BaLi_c15500	COG2076	Multidrug Resistance protein
BaLi_c15510	COG2076	Multidrug Resistance protein
BaLi_c15520	COG0788	formyltetrahydrofolate deformylase activity
BaLi_c15540	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BaLi_c15550	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BaLi_c15560	COG1764	response to oxidative stress
BaLi_c15570	COG1846	Transcriptional regulator
BaLi_c15580	COG1764	response to oxidative stress
BaLi_c15600	COG0590	tRNA wobble adenosine to inosine editing
BaLi_c15610	COG0406	alpha-ribazole phosphatase activity
BaLi_c15640	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BaLi_c15650	COG1404	Belongs to the peptidase S8 family
BaLi_c15670	COG2239	Acts as a magnesium transporter
BaLi_c15690	COG0789	Transcriptional regulator
BaLi_c15720	COG1846	Transcriptional regulator
BaLi_c15730	COG1793	dna ligase
BaLi_c15730	COG3285	dna ligase
BaLi_c15740	COG1273	With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD
BaLi_c15750	COG5001	Diguanylate cyclase
BaLi_c15750	COG3300	MHYT domain
BaLi_c15760	COG0586	Pfam SNARE associated Golgi protein
BaLi_c15770	COG0861	Integral membrane protein TerC family
BaLi_c15780	COG1191	sigma factor activity
BaLi_c15820	COG0501	Belongs to the peptidase M48B family
BaLi_c15830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BaLi_c15840	COG0768	penicillin binding
BaLi_c15870	COG3594	Acyltransferase
BaLi_c15880	COG5002	protein histidine kinase activity
BaLi_c15890	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BaLi_c15900	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
BaLi_c15910	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
BaLi_c15920	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
BaLi_c15930	COG0436	Aminotransferase
BaLi_c15940	COG1850	ribulose-bisphosphate carboxylase activity
BaLi_c15950	COG0235	Class ii aldolase
BaLi_c15950	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
BaLi_c15960	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
BaLi_c15960	COG0235	Class ii aldolase
BaLi_c15970	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
BaLi_c15980	COG0346	lactoylglutathione lyase activity
BaLi_c15990	COG3339	Conserved Protein
BaLi_c16010	COG3852	Histidine kinase
BaLi_c16020	COG1846	Transcriptional regulator
BaLi_c16030	COG1360	Flagellar Motor Protein
BaLi_c16040	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BaLi_c16050	COG0542	response to heat
BaLi_c16060	COG3949	Membrane
BaLi_c16070	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
BaLi_c16080	COG0720	synthase
BaLi_c16090	COG0602	queuosine metabolic process
BaLi_c16100	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
BaLi_c16130	COG0457	Tetratricopeptide repeat
BaLi_c16160	COG3739	integral membrane protein
BaLi_c16170	COG3655	Transcriptional regulator
BaLi_c16240	COG4873	Protein conserved in bacteria
BaLi_c16260	COG3773	Cell wall hydrolase
BaLi_c16270	COG2244	polysaccharide biosynthetic process
BaLi_c16280	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c16290	COG2217	Heavy metal translocating P-type atpase
BaLi_c16300	COG0006	proline dipeptidase activity
BaLi_c16330	COG1609	Transcriptional regulator
BaLi_c16340	COG3711	transcriptional antiterminator
BaLi_c16350	COG1263	PTS System
BaLi_c16350	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c16350	COG2190	(PTS) system
BaLi_c16360	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c16370	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
BaLi_c16380	COG1533	DNA photolyase activity
BaLi_c16390	COG0456	acetyltransferase
BaLi_c16400	COG0840	transmembrane signaling receptor activity
BaLi_c16410	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c16420	COG2084	Dehydrogenase
BaLi_c16430	COG2340	Cysteine-rich secretory protein family
BaLi_c16440	COG0768	penicillin binding
BaLi_c16450	COG4191	Histidine kinase
BaLi_c16460	COG0436	Aminotransferase
BaLi_c16480	COG1714	RDD family
BaLi_c16500	COG0835	chemotaxis
BaLi_c16500	COG0784	Response regulator, receiver
BaLi_c16520	COG2814	Major facilitator Superfamily
BaLi_c16530	COG1376	ErfK ybiS ycfS ynhG family protein
BaLi_c16540	COG1408	metallophosphoesterase
BaLi_c16550	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c16560	COG2200	EAL domain
BaLi_c16580	COG4703	Protein of unknown function (DUF1797)
BaLi_c16600	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
BaLi_c16620	COG0517	IMP dehydrogenase activity
BaLi_c16630	COG0583	DNA-binding transcription factor activity
BaLi_c16640	COG0716	FMN binding
BaLi_c16660	COG0716	FMN binding
BaLi_c16670	COG2171	N-acyltransferase activity
BaLi_c16680	COG1473	amidohydrolase
BaLi_c16700	COG0450	alkyl hydroperoxide reductase
BaLi_c16710	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c16740	COG0746	molybdenum cofactor guanylyltransferase activity
BaLi_c16750	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
BaLi_c16760	COG0303	'Molybdopterin
BaLi_c16770	COG1763	Mo-molybdopterin cofactor biosynthetic process
BaLi_c16780	COG0314	molybdopterin synthase activity
BaLi_c16790	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
BaLi_c16810	COG1132	(ABC) transporter
BaLi_c16820	COG1132	(ABC) transporter
BaLi_c16840	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
BaLi_c16850	COG1136	(ABC) transporter
BaLi_c16860	COG0577	efflux transmembrane transporter activity
BaLi_c16880	COG1349	DNA-binding transcription factor activity
BaLi_c16890	COG1105	Belongs to the carbohydrate kinase PfkB family
BaLi_c16900	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c16900	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c16900	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c16940	COG0488	(ABC) transporter
BaLi_c16960	COG2309	aminopeptidase activity
BaLi_c16980	COG1077	Cell shape determining protein MreB Mrl
BaLi_c16990	COG2002	toxin-antitoxin pair type II binding
BaLi_c17000	COG3852	Histidine kinase
BaLi_c17010	COG0569	domain protein
BaLi_c17020	COG1001	Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family
BaLi_c17030	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BaLi_c17050	COG0561	phosphatase activity
BaLi_c17060	COG0242	peptide deformylase activity
BaLi_c17080	COG0497	DNA recombination
BaLi_c17090	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BaLi_c17100	COG0022	dehydrogenase e1 component
BaLi_c17110	COG0508	dehydrogenase complex catalyzes the overall conversion of
BaLi_c17120	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BaLi_c17130	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c17150	COG1982	Orn Lys Arg decarboxylase major
BaLi_c17160	COG4476	Belongs to the UPF0223 family
BaLi_c17170	COG4493	Belongs to the UPF0637 family
BaLi_c17190	COG0483	inositol monophosphate 1-phosphatase activity
BaLi_c17230	COG1595	DNA-templated transcription, initiation
BaLi_c17290	COG1846	Transcriptional regulator
BaLi_c17300	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
BaLi_c17310	COG4896	Protein conserved in bacteria
BaLi_c17330	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
BaLi_c17340	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BaLi_c17350	COG2066	Belongs to the glutaminase family
BaLi_c17360	COG4838	Belongs to the UPF0358 family
BaLi_c17370	COG0772	Belongs to the SEDS family
BaLi_c17380	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
BaLi_c17390	COG1612	heme a metabolic process
BaLi_c17400	COG0109	protoheme IX farnesyltransferase activity
BaLi_c17410	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BaLi_c17410	COG2010	Cytochrome c
BaLi_c17420	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BaLi_c17430	COG1845	cytochrome c oxidase, subunit III
BaLi_c17440	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BaLi_c17450	COG3336	cytochrome c oxidase
BaLi_c17470	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
BaLi_c17480	COG2340	Cysteine-rich secretory protein family
BaLi_c17510	COG3679	Belongs to the UPF0342 family
BaLi_c17520	COG4471	UPF0298 protein
BaLi_c17530	COG0742	ribosomal rna small subunit methyltransferase
BaLi_c17540	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
BaLi_c17550	COG3314	Sporulation integral membrane protein YlbJ
BaLi_c17560	COG3480	Lon protease (S16) C-terminal proteolytic domain
BaLi_c17570	COG1323	Belongs to the UPF0348 family
BaLi_c17580	COG1399	metal-binding, possibly nucleic acid-binding protein
BaLi_c17590	COG0333	Belongs to the bacterial ribosomal protein bL32 family
BaLi_c17610	COG0454	-acetyltransferase
BaLi_c17620	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
BaLi_c17630	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
BaLi_c17640	COG2001	Belongs to the MraZ family
BaLi_c17650	COG0275	rRNA processing
BaLi_c17660	COG4839	cell division protein FtsL
BaLi_c17680	COG0768	penicillin binding
BaLi_c17690	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
BaLi_c17700	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BaLi_c17710	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BaLi_c17720	COG0772	Belongs to the SEDS family
BaLi_c17730	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BaLi_c17740	COG0812	UDP-N-acetylmuramate dehydrogenase activity
BaLi_c17750	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
BaLi_c17760	COG3879	Bacterial protein of unknown function (DUF881)
BaLi_c17770	COG3879	Bacterial protein of unknown function (DUF881)
BaLi_c17780	COG3856	small basic protein
BaLi_c17790	COG0849	cell division
BaLi_c17800	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
BaLi_c17820	COG1404	Belongs to the peptidase S8 family
BaLi_c17820	COG4412	M6 family metalloprotease domain protein
BaLi_c17830	COG1404	Belongs to the peptidase S8 family
BaLi_c17830	COG4412	M6 family metalloprotease domain protein
BaLi_c17850	COG1191	sigma factor activity
BaLi_c17860	COG1191	sigma factor activity
BaLi_c17870	COG1119	ATPase activity
BaLi_c17880	COG0500	methyltransferase
BaLi_c17890	COG1873	PFAM PRC-barrel domain
BaLi_c17910	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
BaLi_c17920	COG1799	cell septum assembly
BaLi_c17930	COG0762	integral membrane protein
BaLi_c17940	COG2302	S4 RNA-binding domain
BaLi_c17950	COG3599	regulation of cell shape
BaLi_c17960	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
BaLi_c17970	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BaLi_c17980	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
BaLi_c17990	COG0564	pseudouridine synthase activity
BaLi_c18000	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
BaLi_c18010	COG2233	PERMEase
BaLi_c18020	COG0540	Belongs to the ATCase OTCase family
BaLi_c18030	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
BaLi_c18040	COG0505	Belongs to the CarA family
BaLi_c18050	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
BaLi_c18060	COG0543	2 iron, 2 sulfur cluster binding
BaLi_c18070	COG0167	dihydroorotate dehydrogenase activity
BaLi_c18080	COG0284	orotidine-5'-phosphate decarboxylase activity
BaLi_c18090	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
BaLi_c18110	COG0175	sulfate reduction
BaLi_c18120	COG0306	phosphate transporter
BaLi_c18130	COG2046	Belongs to the sulfate adenylyltransferase family
BaLi_c18140	COG0529	Catalyzes the synthesis of activated sulfate
BaLi_c18150	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
BaLi_c18160	COG2138	Cobalamin (vitamin B12) biosynthesis CbiX protein
BaLi_c18170	COG1648	precorrin-2 dehydrogenase activity
BaLi_c18190	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
BaLi_c18200	COG1561	YicC-like family, N-terminal region
BaLi_c18210	COG2052	Domain of unknown function (DUF370)
BaLi_c18220	COG0194	GDP metabolic process
BaLi_c18230	COG1758	RNA polymerase activity
BaLi_c18240	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BaLi_c18250	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
BaLi_c18260	COG0242	peptide deformylase activity
BaLi_c18270	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
BaLi_c18280	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BaLi_c18280	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
BaLi_c18290	COG0820	rRNA (adenine-C2-)-methyltransferase activity
BaLi_c18300	COG0631	protein serine/threonine phosphatase activity
BaLi_c18310	COG2815	serine threonine protein kinase
BaLi_c18310	COG0515	serine threonine protein kinase
BaLi_c18320	COG1162	GTPase activity
BaLi_c18330	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
BaLi_c18340	COG1564	THIamine pyrophosphokinase
BaLi_c18360	COG0227	Belongs to the bacterial ribosomal protein bL28 family
BaLi_c18370	COG1302	Protein conserved in bacteria
BaLi_c18380	COG1461	Dihydroxyacetone kinase
BaLi_c18390	COG1760	l-serine dehydratase
BaLi_c18400	COG1760	l-serine dehydratase
BaLi_c18410	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
BaLi_c18420	COG1349	DNA-binding transcription factor activity
BaLi_c18430	COG0416	fatty acid biosynthetic process
BaLi_c18440	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
BaLi_c18450	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c18460	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BaLi_c18470	COG0571	ribonuclease III activity
BaLi_c18480	COG1196	nuclear chromosome segregation
BaLi_c18490	COG0552	protein localization to endoplasmic reticulum
BaLi_c18500	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
BaLi_c18510	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
BaLi_c18520	COG0228	four-way junction DNA binding
BaLi_c18530	COG1837	Belongs to the UPF0109 family
BaLi_c18550	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
BaLi_c18560	COG0336	Belongs to the RNA methyltransferase TrmD family
BaLi_c18570	COG0335	large ribosomal subunit rRNA binding
BaLi_c18580	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BaLi_c18590	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BaLi_c18610	COG2257	FlhB HrpN YscU SpaS Family
BaLi_c18620	COG0045	succinate-CoA ligase (ADP-forming) activity
BaLi_c18630	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
BaLi_c18640	COG0758	DNA mediated transformation
BaLi_c18650	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
BaLi_c18660	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
BaLi_c18670	COG4974	Belongs to the 'phage' integrase family
BaLi_c18680	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
BaLi_c18690	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
BaLi_c18700	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BaLi_c18720	COG1815	bacterial-type flagellum-dependent cell motility
BaLi_c18730	COG1558	bacterial-type flagellum-dependent cell motility
BaLi_c18740	COG1677	Flagellar hook-basal body complex protein FliE
BaLi_c18750	COG1766	The M ring may be actively involved in energy transduction
BaLi_c18760	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BaLi_c18770	COG1317	bacterial-type flagellum organization
BaLi_c18780	COG1157	protein secretion by the type III secretion system
BaLi_c18790	COG2882	bacterial-type flagellum organization
BaLi_c18810	COG3144	bacterial-type flagellum assembly
BaLi_c18820	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
BaLi_c18830	COG4786	Flagellar basal body rod
BaLi_c18840	COG1582	Flagellar protein (FlbD)
BaLi_c18850	COG1580	Controls the rotational direction of flagella during chemotaxis
BaLi_c18860	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BaLi_c18870	COG1776	CheC inhibitor of MCP methylation
BaLi_c18870	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
BaLi_c18880	COG2201	protein-glutamate methylesterase activity
BaLi_c18890	COG3190	flagellar
BaLi_c18900	COG1338	Plays a role in the flagellum-specific transport system
BaLi_c18910	COG1987	bacterial-type flagellum assembly
BaLi_c18920	COG1684	flagellar biosynthetic protein fliR
BaLi_c18930	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BaLi_c18940	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
BaLi_c18950	COG1419	protein localization to endoplasmic reticulum
BaLi_c18960	COG0455	bacterial-type flagellum organization
BaLi_c18970	COG2201	protein-glutamate methylesterase activity
BaLi_c18980	COG0643	Histidine kinase
BaLi_c18980	COG2198	Histidine kinase
BaLi_c18990	COG0835	chemotaxis
BaLi_c19000	COG1776	CheC inhibitor of MCP methylation
BaLi_c19010	COG1871	Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis
BaLi_c19020	COG1191	sigma factor activity
BaLi_c19040	COG0052	Belongs to the universal ribosomal protein uS2 family
BaLi_c19050	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
BaLi_c19060	COG0528	UMP kinase activity
BaLi_c19070	COG0233	cytoplasmic translational termination
BaLi_c19080	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
BaLi_c19090	COG4589	Belongs to the CDS family
BaLi_c19100	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
BaLi_c19110	COG0750	zinc metalloprotease
BaLi_c19120	COG0442	prolyl-tRNA aminoacylation
BaLi_c19130	COG2176	DNA-directed DNA polymerase activity
BaLi_c19180	COG0779	Required for maturation of 30S ribosomal subunits
BaLi_c19190	COG0195	Participates in both transcription termination and antitermination
BaLi_c19200	COG2740	Nucleic-acid-binding protein implicated in transcription termination
BaLi_c19210	COG1358	cellular component organization or biogenesis
BaLi_c19220	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
BaLi_c19230	COG1550	Protein conserved in bacteria
BaLi_c19240	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
BaLi_c19250	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
BaLi_c19260	COG0196	riboflavin kinase activity
BaLi_c19270	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
BaLi_c19280	COG1185	polyribonucleotide nucleotidyltransferase activity
BaLi_c19290	COG0726	polysaccharide deacetylase
BaLi_c19300	COG0612	Peptidase, M16
BaLi_c19310	COG1873	PFAM PRC-barrel domain
BaLi_c19320	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BaLi_c19330	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
BaLi_c19340	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
BaLi_c19350	COG0527	aspartate kinase activity
BaLi_c19370	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
BaLi_c19380	COG0740	serine-type endopeptidase activity
BaLi_c19400	COG4980	gas vesicle protein
BaLi_c19400	COG1674	ftsk spoiiie
BaLi_c19410	COG2188	Transcriptional regulator
BaLi_c19420	COG2814	Major facilitator Superfamily
BaLi_c19430	COG0612	Peptidase, M16
BaLi_c19440	COG0612	Peptidase, M16
BaLi_c19450	COG0300	oxidoreductase activity
BaLi_c19490	COG1426	Protein conserved in bacteria
BaLi_c19500	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
BaLi_c19510	COG1058	Belongs to the CinA family
BaLi_c19510	COG1546	Belongs to the CinA family
BaLi_c19520	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
BaLi_c19530	COG1418	mRNA catabolic process
BaLi_c19540	COG1692	metallophosphoesterase
BaLi_c19550	COG2359	stage V sporulation protein S
BaLi_c19570	COG1063	alcohol dehydrogenase
BaLi_c19580	COG0156	8-amino-7-oxononanoate synthase activity
BaLi_c19590	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BaLi_c19600	COG4550	Control of competence regulator ComK, YlbF/YmcA
BaLi_c19620	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
BaLi_c19630	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
BaLi_c19640	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
BaLi_c19670	COG0457	Tetratricopeptide repeat
BaLi_c19690	COG5444	nuclease activity
BaLi_c19710	COG0523	cobalamin synthesis protein
BaLi_c19750	COG1231	oxidoreductase activity
BaLi_c19760	COG3619	membrane
BaLi_c19770	COG3263	regulation of cellular component size
BaLi_c19780	COG2814	Major facilitator Superfamily
BaLi_c19800	COG0393	Putative heavy-metal-binding
BaLi_c19810	COG0398	Pfam SNARE associated Golgi protein
BaLi_c19820	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
BaLi_c19830	COG1819	glycosyl
BaLi_c19840	COG0531	amino acid
BaLi_c19850	COG5577	PFAM Coat F domain
BaLi_c19870	COG1388	LysM domain
BaLi_c19870	COG3858	chitin binding
BaLi_c19880	COG1309	transcriptional regulator
BaLi_c19890	COG3631	Ketosteroid isomerase-related protein
BaLi_c19900	COG0702	epimerase
BaLi_c19920	COG1764	response to oxidative stress
BaLi_c19930	COG2076	Multidrug Resistance protein
BaLi_c19940	COG2076	Multidrug Resistance protein
BaLi_c19970	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
BaLi_c19980	COG1923	regulation of RNA biosynthetic process
BaLi_c20010	COG1780	Probably involved in ribonucleotide reductase function
BaLi_c20020	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BaLi_c20030	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
BaLi_c20040	COG4112	unkown
BaLi_c20090	COG1802	Transcriptional regulator
BaLi_c20100	COG0697	spore germination
BaLi_c20170	COG1309	transcriptional regulator
BaLi_c20250	COG2814	Major facilitator Superfamily
BaLi_c20260	COG0457	Tetratricopeptide repeat
BaLi_c20290	COG2732	(Barnase) inhibitor
BaLi_c20330	COG4413	Urea transporter
BaLi_c20340	COG0831	urea catabolic process
BaLi_c20350	COG0832	Belongs to the urease beta subunit family
BaLi_c20370	COG2371	Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly
BaLi_c20380	COG0830	nickel cation binding
BaLi_c20390	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
BaLi_c20400	COG0829	nickel cation binding
BaLi_c20420	COG1695	Transcriptional regulator
BaLi_c20470	COG0464	growth
BaLi_c20480	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
BaLi_c20490	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
BaLi_c20500	COG0789	Transcriptional regulator
BaLi_c20510	COG0174	glutamine synthetase
BaLi_c20550	COG0174	glutamine synthetase
BaLi_c20650	COG0490	domain, Protein
BaLi_c20660	COG0475	glutathione-regulated potassium exporter activity
BaLi_c20680	COG1073	alpha beta
BaLi_c20780	COG1309	transcriptional regulator
BaLi_c20790	COG2076	Multidrug Resistance protein
BaLi_c20800	COG2076	Multidrug Resistance protein
BaLi_c20810	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BaLi_c20840	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c20850	COG3546	catalase activity
BaLi_c20900	COG1846	Transcriptional regulator
BaLi_c20910	COG0346	lactoylglutathione lyase activity
BaLi_c20920	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BaLi_c20930	COG0655	NAD(P)H dehydrogenase (quinone) activity
BaLi_c20960	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
BaLi_c20970	COG3209	COG3209 Rhs family protein
BaLi_c20980	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
BaLi_c20990	COG1388	LysM domain
BaLi_c21000	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
BaLi_c21010	COG4224	UPF0291 protein
BaLi_c21020	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
BaLi_c21040	COG3763	UPF0154 protein
BaLi_c21060	COG0785	Cytochrome C biogenesis protein
BaLi_c21070	COG2201	protein-glutamate methylesterase activity
BaLi_c21080	COG4846	Membrane protein involved in cytochrome C biogenesis
BaLi_c21100	COG0071	Belongs to the small heat shock protein (HSP20) family
BaLi_c21130	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
BaLi_c21140	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c21170	COG0824	Thioesterase
BaLi_c21210	COG4841	protein insertion into membrane
BaLi_c21220	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
BaLi_c21230	COG1832	CoA-binding protein
BaLi_c21240	COG0187	DNA topoisomerase II activity
BaLi_c21250	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
BaLi_c21260	COG1609	Transcriptional regulator
BaLi_c21290	COG2160	L-arabinose isomerase activity
BaLi_c21350	COG1115	amino acid carrier protein
BaLi_c21370	COG2181	nitrate reductase activity
BaLi_c21380	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BaLi_c21390	COG1140	nitrate reductase beta subunit
BaLi_c21400	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BaLi_c21440	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BaLi_c21460	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
BaLi_c21470	COG2223	nitrite transmembrane transporter activity
BaLi_c21510	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
BaLi_c21530	COG2730	Belongs to the glycosyl hydrolase 5 (cellulase A) family
BaLi_c21580	COG0492	ferredoxin-NADP+ reductase activity
BaLi_c21610	COG3420	alginic acid biosynthetic process
BaLi_c21620	COG1114	Component of the transport system for branched-chain amino acids
BaLi_c21630	COG1064	alcohol dehydrogenase
BaLi_c21690	COG1024	Enoyl-CoA hydratase
BaLi_c21700	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c21710	COG2084	Dehydrogenase
BaLi_c21720	COG1960	acyl-CoA dehydrogenase activity
BaLi_c21730	COG1482	cell wall glycoprotein biosynthetic process
BaLi_c21740	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c21740	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c21740	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c21770	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c21770	COG3711	transcriptional antiterminator
BaLi_c21800	COG1725	Transcriptional regulator
BaLi_c21810	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c21820	COG1312	Catalyzes the dehydration of D-mannonate
BaLi_c21850	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
BaLi_c21870	COG1609	Transcriptional regulator
BaLi_c21880	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BaLi_c21890	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
BaLi_c21900	COG0640	Transcriptional regulator
BaLi_c21910	COG4430	Bacteriocin-protection, YdeI or OmpD-Associated
BaLi_c21940	COG1649	PFAM Uncharacterised BCR, COG1649
BaLi_c21950	COG2404	hydrolase activity, acting on ester bonds
BaLi_c21960	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
BaLi_c21980	COG0438	transferase activity, transferring glycosyl groups
BaLi_c22030	COG1309	transcriptional regulator
BaLi_c22040	COG1252	NADH dehydrogenase
BaLi_c22070	COG0166	Belongs to the GPI family
BaLi_c22090	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BaLi_c22100	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BaLi_c22110	COG1024	Enoyl-CoA hydratase
BaLi_c22120	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BaLi_c22130	COG0511	ligase activity, forming carbon-carbon bonds
BaLi_c22140	COG0439	Biotin carboxylase
BaLi_c22150	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c22150	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
BaLi_c22160	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c22170	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c22180	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c22190	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c22200	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c22210	COG1960	acyl-CoA dehydrogenase activity
BaLi_c22220	COG2249	NAD(P)H dehydrogenase (quinone) activity
BaLi_c22230	COG1733	regulation of RNA biosynthetic process
BaLi_c22240	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
BaLi_c22250	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
BaLi_c22270	COG2323	membrane
BaLi_c22280	COG0306	phosphate transporter
BaLi_c22290	COG0175	sulfate reduction
BaLi_c22300	COG1809	phosphosulfolactate synthase activity
BaLi_c22310	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c22320	COG4948	Mandelate Racemase Muconate Lactonizing
BaLi_c22330	COG2814	Major facilitator Superfamily
BaLi_c22340	COG0463	Glycosyl transferase, family 2
BaLi_c22370	COG0493	'glutamate synthase
BaLi_c22380	COG0070	glutamate synthase
BaLi_c22380	COG0069	glutamate synthase activity
BaLi_c22380	COG0067	glutamate synthase
BaLi_c22390	COG0583	DNA-binding transcription factor activity
BaLi_c22460	COG1132	(ABC) transporter
BaLi_c22480	COG0300	oxidoreductase activity
BaLi_c22490	COG3848	Pyruvate phosphate dikinase
BaLi_c22490	COG0574	Belongs to the PEP-utilizing enzyme family
BaLi_c22500	COG0477	Major facilitator Superfamily
BaLi_c22510	COG0243	molybdopterin cofactor binding
BaLi_c22520	COG1846	Transcriptional regulator
BaLi_c22530	COG2814	Major facilitator Superfamily
BaLi_c22540	COG0531	amino acid
BaLi_c22560	COG0531	amino acid
BaLi_c22570	COG0531	amino acid
BaLi_c22580	COG0697	spore germination
BaLi_c22600	COG0840	transmembrane signaling receptor activity
BaLi_c22610	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BaLi_c22620	COG1404	Belongs to the peptidase S8 family
BaLi_c22640	COG1309	transcriptional regulator
BaLi_c22650	COG1846	Transcriptional regulator
BaLi_c22710	COG1309	transcriptional regulator
BaLi_c22720	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c22730	COG3708	Transcriptional regulator
BaLi_c22750	COG2378	regulation of single-species biofilm formation
BaLi_c22770	COG0640	Transcriptional regulator
BaLi_c22810	COG0531	amino acid
BaLi_c22820	COG0741	lytic transglycosylase activity
BaLi_c22830	COG1086	Polysaccharide biosynthesis protein
BaLi_c22860	COG0438	transferase activity, transferring glycosyl groups
BaLi_c22870	COG2322	membrane
BaLi_c22900	COG1619	proteins homologs of microcin C7 resistance protein MccF
BaLi_c22910	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c22920	COG1388	LysM domain
BaLi_c22920	COG3584	3D domain protein
BaLi_c22930	COG0514	ATP-dependent DNA helicase (RecQ)
BaLi_c22970	COG2315	Protein conserved in bacteria
BaLi_c22980	COG5444	nuclease activity
BaLi_c22990	COG2427	Protein of unknown function (DUF1641)
BaLi_c23000	COG3383	formate dehydrogenase (NAD+) activity
BaLi_c23030	COG5444	nuclease activity
BaLi_c23050	COG4653	Phage capsid family
BaLi_c23060	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
BaLi_c23110	COG2350	Protein conserved in bacteria
BaLi_c23150	COG0402	S-adenosylhomocysteine deaminase activity
BaLi_c23180	COG2267	carboxylic ester hydrolase activity
BaLi_c23200	COG1280	lysine exporter protein (LysE YggA)
BaLi_c23210	COG0199	Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site
BaLi_c23230	COG0574	Belongs to the PEP-utilizing enzyme family
BaLi_c23230	COG3848	Pyruvate phosphate dikinase
BaLi_c23270	COG2318	DinB family
BaLi_c23280	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BaLi_c23310	COG0156	8-amino-7-oxononanoate synthase activity
BaLi_c23320	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BaLi_c23350	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c23360	COG2814	Major facilitator Superfamily
BaLi_c23390	COG1657	PFAM Prenyltransferase squalene oxidase
BaLi_c23400	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BaLi_c23420	COG0733	neurotransmitter:sodium symporter activity
BaLi_c23430	COG0385	Bile acid
BaLi_c23440	COG0508	dehydrogenase complex catalyzes the overall conversion of
BaLi_c23450	COG0567	Dehydrogenase, E1 component
BaLi_c23460	COG4548	von Willebrand factor, type A
BaLi_c23470	COG0714	Associated with various cellular activities
BaLi_c23480	COG2032	superoxide dismutase activity
BaLi_c23490	COG1388	LysM domain
BaLi_c23490	COG0791	NLP P60 protein
BaLi_c23500	COG0534	Mate efflux family protein
BaLi_c23510	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BaLi_c23520	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BaLi_c23530	COG2962	Rard protein
BaLi_c23550	COG4305	rare lipoprotein A
BaLi_c23590	COG1733	regulation of RNA biosynthetic process
BaLi_c23600	COG0778	Nitroreductase
BaLi_c23610	COG0400	carboxylic ester hydrolase activity
BaLi_c23630	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c23640	COG3409	Peptidoglycan-binding domain 1 protein
BaLi_c23640	COG0793	Belongs to the peptidase S41A family
BaLi_c23650	COG2226	methyltransferase
BaLi_c23670	COG1876	peptidase activity
BaLi_c23680	COG0813	purine-nucleoside phosphorylase activity
BaLi_c23690	COG0701	Predicted permease
BaLi_c23730	COG0671	phosphoesterase, PA-phosphatase related
BaLi_c23770	COG4479	Belongs to the UPF0346 family
BaLi_c23790	COG1509	lysine 2,3-aminomutase activity
BaLi_c23800	COG0456	acetyltransferase
BaLi_c23810	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BaLi_c23820	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
BaLi_c23830	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
BaLi_c23840	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
BaLi_c23860	COG0456	acetyltransferase
BaLi_c23890	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BaLi_c23900	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
BaLi_c23910	COG1846	Transcriptional regulator
BaLi_c23930	COG3706	GGDEF domain
BaLi_c23940	COG0534	Mate efflux family protein
BaLi_c23970	COG4698	Protein conserved in bacteria
BaLi_c23980	COG2755	lipolytic protein G-D-S-L family
BaLi_c23990	COG1999	signal sequence binding
BaLi_c24020	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
BaLi_c24030	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BaLi_c24040	COG1272	protein, Hemolysin III
BaLi_c24050	COG0204	Acyl-transferase
BaLi_c24060	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
BaLi_c24080	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BaLi_c24100	COG2521	methyltransferase
BaLi_c24100	COG2136	Putative SAM-dependent methyltransferase
BaLi_c24120	COG0129	dihydroxy-acid dehydratase activity
BaLi_c24130	COG1413	lyase activity
BaLi_c24140	COG1418	mRNA catabolic process
BaLi_c24150	COG0386	Belongs to the glutathione peroxidase family
BaLi_c24160	COG2759	Belongs to the formate--tetrahydrofolate ligase family
BaLi_c24170	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
BaLi_c24180	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BaLi_c24200	COG1278	Cold shock
BaLi_c24240	COG0328	RNA-DNA hybrid ribonuclease activity
BaLi_c24250	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
BaLi_c24260	COG0328	RNA-DNA hybrid ribonuclease activity
BaLi_c24270	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BaLi_c24300	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BaLi_c24310	COG1755	Isoprenylcysteine carboxyl methyltransferase
BaLi_c24320	COG3424	synthase
BaLi_c24340	COG2233	PERMEase
BaLi_c24350	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BaLi_c24360	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
BaLi_c24370	COG1199	ATP-dependent helicase activity
BaLi_c24410	COG0116	Belongs to the methyltransferase superfamily
BaLi_c24420	COG3599	regulation of cell shape
BaLi_c24430	COG4474	Belongs to the UPF0398 family
BaLi_c24450	COG3359	exonuclease
BaLi_c24460	COG1205	dead DEAH box helicase
BaLi_c24460	COG1111	helicase
BaLi_c24470	COG2190	(PTS) system
BaLi_c24480	COG0071	Belongs to the small heat shock protein (HSP20) family
BaLi_c24540	COG3331	DNA recombination
BaLi_c24550	COG4499	WXG100 protein secretion system (Wss), protein YukC
BaLi_c24550	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BaLi_c24570	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
BaLi_c24580	COG3935	DnaD domain protein
BaLi_c24590	COG0017	Asparaginyl-tRNA synthetase
BaLi_c24600	COG0436	Aminotransferase
BaLi_c24610	COG5353	protein conserved in bacteria
BaLi_c24630	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
BaLi_c24630	COG1199	ATP-dependent helicase activity
BaLi_c24640	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
BaLi_c24650	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
BaLi_c24660	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
BaLi_c24690	COG0617	tRNA 3'-terminal CCA addition
BaLi_c24700	COG0438	transferase activity, transferring glycosyl groups
BaLi_c24710	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
BaLi_c24720	COG1803	Methylglyoxal synthase
BaLi_c24730	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
BaLi_c24740	COG1694	Mazg nucleotide pyrophosphohydrolase
BaLi_c24750	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c24770	COG4347	Protein of unknown function (DUF1405)
BaLi_c24780	COG2010	Cytochrome c
BaLi_c24780	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BaLi_c24790	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
BaLi_c24800	COG0723	plastoquinol--plastocyanin reductase activity
BaLi_c24820	COG5582	Belongs to the UPF0302 family
BaLi_c24830	COG0457	Tetratricopeptide repeat
BaLi_c24840	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
BaLi_c24850	COG0287	Prephenate dehydrogenase
BaLi_c24860	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
BaLi_c24870	COG0159	tryptophan synthase activity
BaLi_c24880	COG0133	tryptophan synthase activity
BaLi_c24890	COG0135	phosphoribosylanthranilate isomerase activity
BaLi_c24900	COG0134	indole-3-glycerol-phosphate synthase activity
BaLi_c24910	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BaLi_c24920	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
BaLi_c24930	COG4401	Chorismate mutase type I
BaLi_c24940	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
BaLi_c24950	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
BaLi_c24960	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
BaLi_c24970	COG0105	UTP biosynthetic process
BaLi_c24980	COG0142	geranyltranstransferase activity
BaLi_c24990	COG2226	methyltransferase
BaLi_c25000	COG0142	geranyltranstransferase activity
BaLi_c25030	COG0776	regulation of translation
BaLi_c25040	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
BaLi_c25070	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
BaLi_c25080	COG1160	GTP binding
BaLi_c25130	COG1304	FMN binding
BaLi_c25140	COG0539	negative regulation of cytoplasmic translation
BaLi_c25150	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
BaLi_c25170	COG2959	enzyme of heme biosynthesis
BaLi_c25180	COG3773	Cell wall hydrolase
BaLi_c25180	COG3409	Peptidoglycan-binding domain 1 protein
BaLi_c25190	COG2339	peptidase activity
BaLi_c25210	COG0492	ferredoxin-NADP+ reductase activity
BaLi_c25220	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BaLi_c25230	COG4862	establishment of competence for transformation
BaLi_c25240	COG1408	metallophosphoesterase
BaLi_c25270	COG1388	LysM domain
BaLi_c25280	COG1266	CAAX protease self-immunity
BaLi_c25290	COG0514	ATP-dependent DNA helicase (RecQ)
BaLi_c25300	COG4955	Helix-turn-helix domain
BaLi_c25310	COG1141	Ferredoxin
BaLi_c25320	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
BaLi_c25330	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
BaLi_c25340	COG0739	heme binding
BaLi_c25360	COG1595	DNA-templated transcription, initiation
BaLi_c25400	COG5002	protein histidine kinase activity
BaLi_c25410	COG0745	RESPONSE REGULATOR receiver
BaLi_c25420	COG5002	protein histidine kinase activity
BaLi_c25430	COG0745	RESPONSE REGULATOR receiver
BaLi_c25440	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BaLi_c25450	COG1333	cytochrome c biogenesis protein
BaLi_c25460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c25470	COG1187	pseudouridine synthase activity
BaLi_c25480	COG0700	Nucleoside recognition
BaLi_c25490	COG2715	membrane protein required for spore maturation
BaLi_c25500	COG1686	Belongs to the peptidase S11 family
BaLi_c25520	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
BaLi_c25530	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
BaLi_c25550	COG0456	acetyltransferase
BaLi_c25560	COG0054	6,7-dimethyl-8-ribityllumazine synthase activity
BaLi_c25570	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BaLi_c25570	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
BaLi_c25580	COG0307	riboflavin synthase, alpha
BaLi_c25590	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BaLi_c25590	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
BaLi_c25630	COG0457	Tetratricopeptide repeat
BaLi_c25640	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
BaLi_c25650	COG4086	secreted protein
BaLi_c25660	COG4195	phage-related replication protein
BaLi_c25670	COG0019	diaminopimelate decarboxylase activity
BaLi_c25690	COG0697	spore germination
BaLi_c25720	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
BaLi_c25790	COG1686	Belongs to the peptidase S11 family
BaLi_c25800	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
BaLi_c25810	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
BaLi_c25820	COG4974	Belongs to the 'phage' integrase family
BaLi_c25830	COG0735	belongs to the Fur family
BaLi_c25840	COG1300	Membrane
BaLi_c25850	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c25870	COG1953	Uracil, thiamine, allantoin
BaLi_c25890	COG2153	protein acetylation
BaLi_c25900	COG1379	DNA repair
BaLi_c25910	COG0494	nUDIX hydrolase
BaLi_c25930	COG1309	transcriptional regulator
BaLi_c25950	COG0667	Aldo Keto reductase
BaLi_c25970	COG1073	alpha beta
BaLi_c25990	COG4918	Iron-sulphur cluster biosynthesis
BaLi_c26010	COG0456	acetyltransferase
BaLi_c26010	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BaLi_c26020	COG2329	Antibiotic biosynthesis monooxygenase
BaLi_c26030	COG1075	acetyltransferases and hydrolases with the alpha beta hydrolase fold
BaLi_c26050	COG0747	negative chemotaxis
BaLi_c26060	COG0601	transmembrane transport
BaLi_c26070	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BaLi_c26080	COG0444	Belongs to the ABC transporter superfamily
BaLi_c26100	COG0534	Mate efflux family protein
BaLi_c26130	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BaLi_c26150	COG2211	Major facilitator Superfamily
BaLi_c26160	COG0346	lactoylglutathione lyase activity
BaLi_c26170	COG1072	(Pantothenic acid kinase))
BaLi_c26240	COG2205	protein histidine kinase activity
BaLi_c26250	COG0745	RESPONSE REGULATOR receiver
BaLi_c26300	COG2814	Major facilitator Superfamily
BaLi_c26320	COG4195	phage-related replication protein
BaLi_c26330	COG0300	oxidoreductase activity
BaLi_c26340	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c26350	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BaLi_c26360	COG4187	Peptidase family M20/M25/M40
BaLi_c26370	COG1902	pentaerythritol trinitrate reductase activity
BaLi_c26380	COG0596	Alpha beta hydrolase
BaLi_c26390	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BaLi_c26400	COG1234	tRNA 3'-trailer cleavage
BaLi_c26410	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
BaLi_c26450	COG2188	Transcriptional regulator
BaLi_c26460	COG2723	6-phospho-beta-galactosidase activity
BaLi_c26470	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c26480	COG1447	Phosphotransferase system cellobiose-specific component IIA
BaLi_c26490	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c26500	COG1785	Belongs to the alkaline phosphatase family
BaLi_c26510	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c26520	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
BaLi_c26530	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
BaLi_c26550	COG0706	membrane insertase activity
BaLi_c26560	COG2195	Cleaves the N-terminal amino acid of tripeptides
BaLi_c26570	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
BaLi_c26580	COG4129	membrane
BaLi_c26590	COG1126	abc transporter atp-binding protein
BaLi_c26600	COG0765	amino acid transport
BaLi_c26610	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
BaLi_c26630	COG1597	lipid kinase activity
BaLi_c26640	COG0508	dehydrogenase complex catalyzes the overall conversion of
BaLi_c26650	COG0022	dehydrogenase e1 component
BaLi_c26660	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
BaLi_c26670	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
BaLi_c26680	COG3426	butyrate kinase activity
BaLi_c26700	COG0280	phosphate acetyltransferase
BaLi_c26710	COG3829	transcription factor binding
BaLi_c26710	COG3290	protein histidine kinase activity
BaLi_c26730	COG0584	glycerophosphoryl diester phosphodiesterase
BaLi_c26740	COG0860	N-Acetylmuramoyl-L-alanine amidase
BaLi_c26780	COG0745	RESPONSE REGULATOR receiver
BaLi_c26790	COG0750	zinc metalloprotease
BaLi_c26810	COG0497	DNA recombination
BaLi_c26820	COG1438	arginine binding
BaLi_c26830	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
BaLi_c26840	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
BaLi_c26850	COG0142	geranyltranstransferase activity
BaLi_c26860	COG1722	exodeoxyribonuclease VII activity
BaLi_c26870	COG1570	exodeoxyribonuclease VII activity
BaLi_c26880	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
BaLi_c26890	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
BaLi_c26900	COG1302	Protein conserved in bacteria
BaLi_c26910	COG0439	Biotin carboxylase
BaLi_c26920	COG0511	ligase activity, forming carbon-carbon bonds
BaLi_c27000	COG3854	ATPases associated with a variety of cellular activities
BaLi_c27020	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
BaLi_c27030	COG0006	proline dipeptidase activity
BaLi_c27040	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
BaLi_c27060	COG3872	metal-dependent enzyme
BaLi_c27080	COG1752	Esterase of the alpha-beta hydrolase superfamily
BaLi_c27090	COG1321	iron dependent repressor
BaLi_c27100	COG0095	Lipoate-protein ligase
BaLi_c27110	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BaLi_c27120	COG2113	Glycine betaine
BaLi_c27130	COG4176	ABC-type proline glycine betaine transport system permease component
BaLi_c27140	COG4175	Glycine betaine
BaLi_c27140	COG0517	IMP dehydrogenase activity
BaLi_c27150	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BaLi_c27160	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
BaLi_c27170	COG0404	The glycine cleavage system catalyzes the degradation of glycine
BaLi_c27180	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BaLi_c27220	COG0681	Belongs to the peptidase S26 family
BaLi_c27260	COG4940	Competence protein ComGF
BaLi_c27270	COG4970	Tfp pilus assembly protein FimT
BaLi_c27280	COG4537	Required for transformation and DNA binding
BaLi_c27290	COG1459	type II secretion system
BaLi_c27300	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
BaLi_c27310	COG1366	Belongs to the anti-sigma-factor antagonist family
BaLi_c27330	COG1393	Belongs to the ArsC family
BaLi_c27350	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c27370	COG0011	TIGRFAM Protein of
BaLi_c27390	COG2866	Carboxypeptidase
BaLi_c27400	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c27410	COG1368	sulfuric ester hydrolase activity
BaLi_c27420	COG1940	carbohydrate kinase activity
BaLi_c27430	COG4483	Protein conserved in bacteria
BaLi_c27440	COG0697	spore germination
BaLi_c27450	COG0457	Tetratricopeptide repeat
BaLi_c27450	COG0705	Rhomboid family
BaLi_c27470	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
BaLi_c27480	COG0267	Belongs to the bacterial ribosomal protein bL33 family
BaLi_c27490	COG0438	transferase activity, transferring glycosyl groups
BaLi_c27520	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BaLi_c27600	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BaLi_c27610	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
BaLi_c27620	COG0581	inorganic phosphate transmembrane transporter activity
BaLi_c27630	COG0573	inorganic phosphate transmembrane transporter activity
BaLi_c27640	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
BaLi_c27660	COG0477	Major facilitator Superfamily
BaLi_c27670	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
BaLi_c27680	COG2839	Protein conserved in bacteria
BaLi_c27690	COG5521	maltodextrose utilization protein MalA
BaLi_c27700	COG1388	LysM domain
BaLi_c27710	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
BaLi_c27720	COG4709	membrane
BaLi_c27730	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
BaLi_c27740	COG0735	belongs to the Fur family
BaLi_c27750	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BaLi_c27760	COG1121	(ABC) transporter
BaLi_c27770	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c27790	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
BaLi_c27800	COG0513	Belongs to the DEAD box helicase family
BaLi_c27820	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
BaLi_c27830	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
BaLi_c27840	COG2384	SAM-dependent methyltransferase
BaLi_c27890	COG5444	nuclease activity
BaLi_c27920	COG2010	Cytochrome c
BaLi_c27930	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
BaLi_c27940	COG0358	DNA primase activity
BaLi_c27950	COG1671	Belongs to the UPF0178 family
BaLi_c27960	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
BaLi_c27970	COG0517	IMP dehydrogenase activity
BaLi_c27980	COG0751	glycine-tRNA ligase activity
BaLi_c27990	COG0752	glycyl-tRNA synthetase alpha subunit
BaLi_c28000	COG1381	Involved in DNA repair and RecF pathway recombination
BaLi_c28020	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
BaLi_c28030	COG0295	cytidine deaminase activity
BaLi_c28040	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
BaLi_c28050	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
BaLi_c28060	COG1480	7TM receptor with intracellular HD hydrolase
BaLi_c28070	COG1702	phosphate starvation-inducible protein PhoH
BaLi_c28080	COG0561	phosphatase activity
BaLi_c28110	COG4864	UPF0365 protein
BaLi_c28120	COG1030	water channel activity
BaLi_c28130	COG1610	YqeY-like protein
BaLi_c28140	COG0828	Belongs to the bacterial ribosomal protein bS21 family
BaLi_c28150	COG1283	sodium-dependent phosphate transmembrane transporter activity
BaLi_c28160	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BaLi_c28170	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
BaLi_c28180	COG1385	rRNA (uridine-N3-)-methyltransferase activity
BaLi_c28190	COG2264	protein methyltransferase activity
BaLi_c28200	COG0484	heat shock protein binding
BaLi_c28210	COG0443	Heat shock 70 kDa protein
BaLi_c28220	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
BaLi_c28230	COG1420	regulation of RNA biosynthetic process
BaLi_c28240	COG0635	Involved in the biosynthesis of porphyrin-containing compound
BaLi_c28250	COG0481	GTPase activity
BaLi_c28270	COG0860	N-Acetylmuramoyl-L-alanine amidase
BaLi_c28280	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
BaLi_c28290	COG0268	Binds directly to 16S ribosomal RNA
BaLi_c28310	COG1733	regulation of RNA biosynthetic process
BaLi_c28320	COG2249	NAD(P)H dehydrogenase (quinone) activity
BaLi_c28330	COG1466	dna polymerase III delta subunit
BaLi_c28350	COG0658	competence protein
BaLi_c28350	COG2333	competence protein COMEC
BaLi_c28360	COG2131	deaminase
BaLi_c28370	COG1596	polysaccharide export
BaLi_c28370	COG1555	photosystem II stabilization
BaLi_c28380	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
BaLi_c28390	COG2226	methyltransferase
BaLi_c28400	COG0799	negative regulation of ribosome biogenesis
BaLi_c28410	COG1713	HD superfamily hydrolase involved in NAD metabolism
BaLi_c28420	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
BaLi_c28430	COG1534	Rna-binding protein
BaLi_c28440	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
BaLi_c28450	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
BaLi_c28460	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
BaLi_c28480	COG2755	lipolytic protein G-D-S-L family
BaLi_c28500	COG5609	conserved protein (DUF2294)
BaLi_c28510	COG3383	formate dehydrogenase (NAD+) activity
BaLi_c28520	COG2427	Protein of unknown function (DUF1641)
BaLi_c28580	COG2723	6-phospho-beta-galactosidase activity
BaLi_c28590	COG1447	Phosphotransferase system cellobiose-specific component IIA
BaLi_c28600	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c28630	COG0561	phosphatase activity
BaLi_c28640	COG1486	melibiose metabolic process
BaLi_c28670	COG4978	Transcriptional regulator
BaLi_c28670	COG0789	Transcriptional regulator
BaLi_c28700	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
BaLi_c28710	COG2828	Protein conserved in bacteria
BaLi_c28730	COG2181	nitrate reductase activity
BaLi_c28740	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
BaLi_c28750	COG1140	nitrate reductase beta subunit
BaLi_c28760	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
BaLi_c28770	COG2223	nitrite transmembrane transporter activity
BaLi_c28800	COG3226	Transcriptional regulator
BaLi_c28860	COG2197	response regulator
BaLi_c28870	COG4585	Histidine kinase
BaLi_c28880	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c28890	COG0730	response to heat
BaLi_c28900	COG0425	Belongs to the sulfur carrier protein TusA family
BaLi_c28910	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c28910	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BaLi_c28920	COG0425	Belongs to the sulfur carrier protein TusA family
BaLi_c28920	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BaLi_c28930	COG2210	Belongs to the sulfur carrier protein TusA family
BaLi_c28940	COG1937	Protein conserved in bacteria
BaLi_c28980	COG1942	4-Oxalocrotonate Tautomerase
BaLi_c28990	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
BaLi_c29000	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
BaLi_c29010	COG1733	regulation of RNA biosynthetic process
BaLi_c29020	COG3239	Fatty acid desaturase
BaLi_c29030	COG4585	Histidine kinase
BaLi_c29040	COG2197	response regulator
BaLi_c29050	COG0492	ferredoxin-NADP+ reductase activity
BaLi_c29060	COG0747	negative chemotaxis
BaLi_c29070	COG0601	transmembrane transport
BaLi_c29080	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
BaLi_c29090	COG0444	Belongs to the ABC transporter superfamily
BaLi_c29100	COG4608	Belongs to the ABC transporter superfamily
BaLi_c29140	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c29170	COG2124	cytochrome p450
BaLi_c29180	COG0730	response to heat
BaLi_c29190	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c29200	COG2211	Major facilitator Superfamily
BaLi_c29220	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c29230	COG1621	beta-fructofuranosidase activity
BaLi_c29240	COG3716	PTS system mannose fructose sorbose family IID component
BaLi_c29250	COG3715	PTS system
BaLi_c29260	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c29270	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c29280	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
BaLi_c29280	COG3933	PFAM sigma-54 factor interaction domain-containing protein
BaLi_c29310	COG2169	Transcriptional regulator
BaLi_c29320	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
BaLi_c29330	COG2205	protein histidine kinase activity
BaLi_c29370	COG0656	L-ascorbic acid biosynthetic process
BaLi_c29380	COG2814	Major facilitator Superfamily
BaLi_c29390	COG1733	regulation of RNA biosynthetic process
BaLi_c29400	COG3340	Belongs to the peptidase S51 family
BaLi_c29410	COG1587	Uroporphyrinogen-III synthase
BaLi_c29430	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c29440	COG0583	DNA-binding transcription factor activity
BaLi_c29450	COG2814	Major facilitator Superfamily
BaLi_c29470	COG2124	cytochrome p450
BaLi_c29470	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
BaLi_c29480	COG1309	transcriptional regulator
BaLi_c29490	COG1404	Belongs to the peptidase S8 family
BaLi_c29500	COG2226	methyltransferase
BaLi_c29540	COG0626	cystathionine gamma-synthase activity
BaLi_c29550	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BaLi_c29560	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
BaLi_c29570	COG2226	methyltransferase
BaLi_c29600	COG0768	penicillin binding
BaLi_c29610	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
BaLi_c29620	COG0572	uridine kinase
BaLi_c29660	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
BaLi_c29670	COG3906	Belongs to the UPF0473 family
BaLi_c29680	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
BaLi_c29690	COG4472	Bacterial protein of unknown function (DUF965)
BaLi_c29700	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
BaLi_c29710	COG0628	permease
BaLi_c29730	COG3881	PFAM PRC-barrel domain
BaLi_c29740	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BaLi_c29750	COG0457	Tetratricopeptide repeat
BaLi_c29760	COG0482	sulfurtransferase activity
BaLi_c29770	COG1104	cysteine desulfurase activity
BaLi_c29780	COG1959	2 iron, 2 sulfur cluster binding
BaLi_c29790	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
BaLi_c29800	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
BaLi_c29810	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
BaLi_c29820	COG0124	histidyl-tRNA synthetase
BaLi_c29830	COG4991	sh3 domain protein
BaLi_c29830	COG3103	Sh3 type 3 domain protein
BaLi_c29830	COG0860	N-Acetylmuramoyl-L-alanine amidase
BaLi_c29840	COG1490	D-aminoacyl-tRNA deacylase activity
BaLi_c29850	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
BaLi_c29860	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
BaLi_c29870	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
BaLi_c29870	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
BaLi_c29880	COG5416	Lipopolysaccharide assembly protein A domain
BaLi_c29890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BaLi_c29890	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
BaLi_c29910	COG2244	polysaccharide biosynthetic process
BaLi_c29920	COG2323	membrane
BaLi_c29940	COG1862	Preprotein translocase
BaLi_c29950	COG0343	queuine tRNA-ribosyltransferase activity
BaLi_c29960	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
BaLi_c29980	COG2255	four-way junction helicase activity
BaLi_c29990	COG0632	four-way junction helicase activity
BaLi_c30010	COG2112	serine threonine protein kinase
BaLi_c30030	COG2318	DinB family
BaLi_c30040	COG4195	phage-related replication protein
BaLi_c30060	COG0217	transcriptional regulatory protein
BaLi_c30080	COG1388	LysM domain
BaLi_c30090	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
BaLi_c30100	COG0157	Belongs to the NadC ModD family
BaLi_c30110	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
BaLi_c30120	COG1104	cysteine desulfurase activity
BaLi_c30130	COG1827	regulation of RNA biosynthetic process
BaLi_c30140	COG0077	Prephenate dehydratase
BaLi_c30150	COG4492	Belongs to the UPF0735 family
BaLi_c30160	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
BaLi_c30170	COG3290	protein histidine kinase activity
BaLi_c30180	COG0211	Belongs to the bacterial ribosomal protein bL27 family
BaLi_c30190	COG2868	ribosomal protein
BaLi_c30200	COG0261	This protein binds to 23S rRNA in the presence of protein L20
BaLi_c30210	COG1994	Peptidase M50
BaLi_c30220	COG0739	heme binding
BaLi_c30230	COG3832	glyoxalase III activity
BaLi_c30240	COG0640	Transcriptional regulator
BaLi_c30250	COG2894	cell division
BaLi_c30260	COG0850	regulation of cytokinetic process
BaLi_c30270	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
BaLi_c30280	COG1792	Involved in formation and maintenance of cell shape
BaLi_c30290	COG1077	Cell shape determining protein MreB Mrl
BaLi_c30300	COG2003	Belongs to the UPF0758 family
BaLi_c30310	COG0424	maF-like protein
BaLi_c30330	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
BaLi_c30340	COG0285	dihydrofolate synthase activity
BaLi_c30350	COG0525	valine-tRNA ligase activity
BaLi_c30370	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BaLi_c30380	COG1388	LysM domain
BaLi_c30390	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
BaLi_c30400	COG0113	porphobilinogen synthase activity
BaLi_c30410	COG1587	Uroporphyrinogen-III synthase
BaLi_c30420	COG0181	hydroxymethylbilane synthase activity
BaLi_c30430	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
BaLi_c30440	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
BaLi_c30460	COG0218	Necessary for normal cell division and for the maintenance of normal septation
BaLi_c30470	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
BaLi_c30480	COG1067	ATP-dependent peptidase activity
BaLi_c30480	COG0470	DNA polymerase III
BaLi_c30490	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
BaLi_c30500	COG0544	peptidyl-prolyl cis-trans isomerase activity
BaLi_c30510	COG1477	protein flavinylation
BaLi_c30510	COG0457	Tetratricopeptide repeat
BaLi_c30520	COG0066	3-isopropylmalate dehydratase activity
BaLi_c30530	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
BaLi_c30540	COG0473	3-isopropylmalate dehydrogenase activity
BaLi_c30550	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
BaLi_c30560	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
BaLi_c30570	COG0440	acetolactate synthase activity
BaLi_c30580	COG0028	Belongs to the TPP enzyme family
BaLi_c30590	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BaLi_c30610	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
BaLi_c30650	COG0622	Phosphoesterase
BaLi_c30660	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
BaLi_c30670	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
BaLi_c30680	COG5401	PFAM Sporulation and spore germination
BaLi_c30690	COG0796	Provides the (R)-glutamate required for cell wall biosynthesis
BaLi_c30700	COG1846	Transcriptional regulator
BaLi_c30710	COG2197	response regulator
BaLi_c30720	COG4221	oxidoreductase activity
BaLi_c30730	COG0824	Thioesterase
BaLi_c30740	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
BaLi_c30750	COG1053	succinate dehydrogenase
BaLi_c30760	COG2009	succinate dehydrogenase
BaLi_c30770	COG1719	4-vinyl reductase, 4VR
BaLi_c30780	COG0527	aspartate kinase activity
BaLi_c30790	COG0322	excinuclease ABC activity
BaLi_c30800	COG3118	belongs to the thioredoxin family
BaLi_c30810	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
BaLi_c30820	COG2086	electron transfer activity
BaLi_c30830	COG1024	Enoyl-CoA hydratase
BaLi_c30840	COG1309	transcriptional regulator
BaLi_c30850	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c30860	COG3766	membrane
BaLi_c30870	COG1193	negative regulation of DNA recombination
BaLi_c30880	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BaLi_c30880	COG1796	DNA polymerase
BaLi_c30890	COG1286	toxin biosynthetic process
BaLi_c30900	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
BaLi_c30910	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
BaLi_c30940	COG0072	phenylalanine-tRNA ligase activity
BaLi_c30940	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BaLi_c30950	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
BaLi_c30960	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
BaLi_c30970	COG1966	Carbon starvation protein
BaLi_c30980	COG1309	transcriptional regulator
BaLi_c30990	COG3402	PFAM membrane-flanked domain
BaLi_c31030	COG0395	ABC-type sugar transport system, permease component
BaLi_c31040	COG1175	transmembrane transport
BaLi_c31050	COG1653	transport
BaLi_c31060	COG0371	Dehydrogenase
BaLi_c31070	COG0235	Class ii aldolase
BaLi_c31080	COG1069	ribulokinase activity
BaLi_c31090	COG2160	L-arabinose isomerase activity
BaLi_c31100	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c31110	COG1363	Peptidase, m42
BaLi_c31130	COG3326	Membrane
BaLi_c31140	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
BaLi_c31150	COG0291	Belongs to the bacterial ribosomal protein bL35 family
BaLi_c31160	COG0290	IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
BaLi_c31170	COG1346	cytolysis
BaLi_c31190	COG3540	Alkaline phosphatase
BaLi_c31200	COG3279	Response regulator of the LytR AlgR family
BaLi_c31210	COG3275	phosphorelay sensor kinase activity
BaLi_c31240	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
BaLi_c31260	COG0398	Pfam SNARE associated Golgi protein
BaLi_c31270	COG1484	DNA-dependent DNA replication
BaLi_c31280	COG3611	Membrane attachment protein
BaLi_c31290	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
BaLi_c31310	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
BaLi_c31320	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BaLi_c31330	COG3866	Pectate lyase
BaLi_c31340	COG0237	dephospho-CoA kinase activity
BaLi_c31350	COG1971	Probably functions as a manganese efflux pump
BaLi_c31360	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
BaLi_c31370	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BaLi_c31370	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
BaLi_c31380	COG5002	protein histidine kinase activity
BaLi_c31400	COG0745	RESPONSE REGULATOR receiver
BaLi_c31410	COG0039	L-malate dehydrogenase activity
BaLi_c31420	COG0538	isocitrate dehydrogenase activity
BaLi_c31430	COG0372	Belongs to the citrate synthase family
BaLi_c31440	COG2273	Hydrolase Family 16
BaLi_c31450	COG2707	UPF0756 membrane protein
BaLi_c31460	COG0628	permease
BaLi_c31470	COG3030	protein affecting phage T7 exclusion by the F plasmid
BaLi_c31490	COG0205	6-phosphofructokinase activity
BaLi_c31500	COG0825	malonyl-CoA metabolic process
BaLi_c31510	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
BaLi_c31520	COG0281	malic enzyme
BaLi_c31530	COG0587	DNA-directed DNA polymerase activity
BaLi_c31570	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
BaLi_c31590	COG4109	DRTGG domain
BaLi_c31600	COG1695	Transcriptional regulator
BaLi_c31610	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
BaLi_c31620	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c31640	COG0165	Argininosuccinate lyase
BaLi_c31650	COG0137	argininosuccinate synthase activity
BaLi_c31660	COG0521	Mo-molybdopterin cofactor biosynthetic process
BaLi_c31670	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
BaLi_c31680	COG0827	DNA restriction-modification system
BaLi_c31690	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
BaLi_c31700	COG3874	Sporulation protein YtfJ
BaLi_c31720	COG1714	RDD family
BaLi_c31730	COG0616	signal peptide processing
BaLi_c31740	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
BaLi_c31750	COG1846	Transcriptional regulator
BaLi_c31760	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BaLi_c31780	COG0301	tRNA thio-modification
BaLi_c31790	COG1104	cysteine desulfurase activity
BaLi_c31800	COG1114	Component of the transport system for branched-chain amino acids
BaLi_c31810	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
BaLi_c31820	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
BaLi_c31830	COG1309	transcriptional regulator
BaLi_c31840	COG1956	GAF domain-containing protein
BaLi_c31850	COG2199	diguanylate cyclase activity
BaLi_c31850	COG2203	Gaf domain
BaLi_c31860	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
BaLi_c31880	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
BaLi_c31890	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
BaLi_c31900	COG0454	-acetyltransferase
BaLi_c31910	COG0517	IMP dehydrogenase activity
BaLi_c31920	COG0123	including yeast histone deacetylase and acetoin utilization protein
BaLi_c31930	COG1360	Flagellar Motor Protein
BaLi_c31940	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
BaLi_c31950	COG1609	Transcriptional regulator
BaLi_c31960	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
BaLi_c31960	COG1605	Chorismate mutase
BaLi_c31980	COG3118	belongs to the thioredoxin family
BaLi_c31990	COG4980	gas vesicle protein
BaLi_c32000	COG4768	protein containing a divergent version of the methyl-accepting chemotaxis-like domain
BaLi_c32010	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
BaLi_c32020	COG1674	ftsk spoiiie
BaLi_c32030	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
BaLi_c32040	COG4848	Belongs to the UPF0354 family
BaLi_c32050	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c32070	COG1363	Peptidase, m42
BaLi_c32080	COG5584	Small secreted protein
BaLi_c32090	COG0281	malic enzyme
BaLi_c32100	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
BaLi_c32110	COG0220	tRNA (guanine-N7-)-methyltransferase activity
BaLi_c32130	COG0510	thiamine kinase activity
BaLi_c32140	COG1523	belongs to the glycosyl hydrolase 13 family
BaLi_c32150	COG1597	lipid kinase activity
BaLi_c32170	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
BaLi_c32180	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
BaLi_c32210	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
BaLi_c32220	COG2252	PERMEase
BaLi_c32230	COG4473	ABC transporter
BaLi_c32240	COG1131	(ABC) transporter
BaLi_c32250	COG1349	DNA-binding transcription factor activity
BaLi_c32260	COG1187	pseudouridine synthase activity
BaLi_c32270	COG2244	polysaccharide biosynthetic process
BaLi_c32280	COG2081	HI0933 family
BaLi_c32290	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
BaLi_c32310	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BaLi_c32320	COG0457	Tetratricopeptide repeat
BaLi_c32340	COG5578	integral membrane protein
BaLi_c32350	COG0673	inositol 2-dehydrogenase activity
BaLi_c32360	COG1653	transport
BaLi_c32370	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
BaLi_c32380	COG4209	transmembrane transport
BaLi_c32390	COG2207	Transcriptional regulator
BaLi_c32400	COG1653	transport
BaLi_c32410	COG0395	ABC-type sugar transport system, permease component
BaLi_c32420	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BaLi_c32430	COG1073	alpha beta
BaLi_c32450	COG0583	DNA-binding transcription factor activity
BaLi_c32460	COG0346	lactoylglutathione lyase activity
BaLi_c32470	COG0495	leucyl-tRNA aminoacylation
BaLi_c32490	COG2814	Major facilitator Superfamily
BaLi_c32500	COG1464	Belongs to the NlpA lipoprotein family
BaLi_c32510	COG2433	Pfam Transposase IS66
BaLi_c32520	COG0577	efflux transmembrane transporter activity
BaLi_c32530	COG1136	(ABC) transporter
BaLi_c32550	COG1131	(ABC) transporter
BaLi_c32560	COG1725	Transcriptional regulator
BaLi_c32590	COG1242	4 iron, 4 sulfur cluster binding
BaLi_c32600	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
BaLi_c32620	COG2267	carboxylic ester hydrolase activity
BaLi_c32630	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
BaLi_c32640	COG0671	phosphoesterase, PA-phosphatase related
BaLi_c32650	COG0438	transferase activity, transferring glycosyl groups
BaLi_c32650	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BaLi_c32660	COG0367	asparagine synthase
BaLi_c32670	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
BaLi_c32680	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
BaLi_c32710	COG1506	peptidase
BaLi_c32720	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
BaLi_c32730	COG1116	anion transmembrane transporter activity
BaLi_c32740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
BaLi_c32750	COG0494	nUDIX hydrolase
BaLi_c32770	COG4824	toxin secretion phage lysis holin
BaLi_c32780	COG0783	Belongs to the Dps family
BaLi_c32810	COG1854	S-ribosylhomocysteine lyase activity
BaLi_c32820	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
BaLi_c32830	COG0288	reversible hydration of carbon dioxide
BaLi_c32840	COG0523	cobalamin synthesis protein
BaLi_c32850	COG0803	Belongs to the bacterial solute-binding protein 9 family
BaLi_c32870	COG0254	rRNA binding
BaLi_c32880	COG1271	oxidase subunit
BaLi_c32890	COG1294	oxidase, subunit
BaLi_c32920	COG4948	Mandelate Racemase Muconate Lactonizing
BaLi_c32930	COG0318	PFAM AMP-dependent synthetase and ligase
BaLi_c32940	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
BaLi_c32950	COG0596	Alpha beta hydrolase
BaLi_c32960	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
BaLi_c32970	COG1169	isochorismate synthase
BaLi_c32980	COG1575	Belongs to the MenA family. Type 1 subfamily
BaLi_c32990	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
BaLi_c33000	COG0058	SHG alpha-glucan phosphorylase activity
BaLi_c33010	COG0297	glycogen (starch) synthase activity
BaLi_c33020	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BaLi_c33030	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
BaLi_c33040	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
BaLi_c33280	COG1609	Transcriptional regulator
BaLi_c33290	COG3859	Proton-coupled thiamine transporter YuaJ
BaLi_c33300	COG3764	Sortase (surface protein transpeptidase)
BaLi_c33320	COG0457	Tetratricopeptide repeat
BaLi_c33330	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
BaLi_c33340	COG0569	domain protein
BaLi_c33380	COG2318	DinB family
BaLi_c33400	COG1454	alcohol dehydrogenase
BaLi_c33420	COG1510	regulation of RNA biosynthetic process
BaLi_c33440	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
BaLi_c33450	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
BaLi_c33460	COG2140	Oxalate decarboxylase
BaLi_c33480	COG1397	ADP-ribosylglycohydrolase
BaLi_c33690	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
BaLi_c33700	COG0726	polysaccharide deacetylase
BaLi_c33710	COG1408	metallophosphoesterase
BaLi_c33720	COG1968	undecaprenyl-diphosphatase activity
BaLi_c33730	COG0628	permease
BaLi_c33740	COG0673	inositol 2-dehydrogenase activity
BaLi_c33750	COG0693	protein deglycase activity
BaLi_c33760	COG0840	transmembrane signaling receptor activity
BaLi_c33770	COG0840	transmembrane signaling receptor activity
BaLi_c33780	COG0840	transmembrane signaling receptor activity
BaLi_c33800	COG2070	2-Nitropropane dioxygenase
BaLi_c33810	COG0432	Pfam Uncharacterised protein family UPF0047
BaLi_c33820	COG0366	Alpha amylase catalytic
BaLi_c33850	COG5297	Belongs to the glycosyl hydrolase family 6
BaLi_c33860	COG1253	flavin adenine dinucleotide binding
BaLi_c33870	COG2738	Putative neutral zinc metallopeptidase
BaLi_c33890	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
BaLi_c33910	COG2323	membrane
BaLi_c33920	COG3476	COG3476 Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog)
BaLi_c33940	COG0166	Belongs to the GPI family
BaLi_c33950	COG1979	alcohol dehydrogenase
BaLi_c33960	COG2155	Conserved Protein
BaLi_c33970	COG1098	S1 RNA binding domain
BaLi_c33980	COG0436	Aminotransferase
BaLi_c33990	COG1522	sequence-specific DNA binding
BaLi_c34000	COG2267	carboxylic ester hydrolase activity
BaLi_c34030	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
BaLi_c34060	COG5018	Exonuclease
BaLi_c34070	COG2814	Major facilitator Superfamily
BaLi_c34080	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BaLi_c34090	COG3011	Protein conserved in bacteria
BaLi_c34110	COG3290	protein histidine kinase activity
BaLi_c34120	COG4565	transcriptional regulatory protein
BaLi_c34130	COG1183	phosphatidylcholine synthase activity
BaLi_c34140	COG0586	Pfam SNARE associated Golgi protein
BaLi_c34150	COG0688	phosphatidylethanolamine metabolic process
BaLi_c34160	COG3493	citrate carrier protein
BaLi_c34170	COG2111	Na H antiporter
BaLi_c34170	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
BaLi_c34180	COG2111	Na H antiporter
BaLi_c34190	COG1006	Multisubunit Na H antiporter MnhC subunit
BaLi_c34200	COG0651	ATP synthesis coupled electron transport
BaLi_c34210	COG1863	multisubunit Na H antiporter MnhE subunit
BaLi_c34220	COG2212	antiporter activity
BaLi_c34230	COG1320	monovalent cation:proton antiporter activity
BaLi_c34240	COG2050	protein possibly involved in aromatic compounds catabolism
BaLi_c34250	COG2197	response regulator
BaLi_c34260	COG4585	Histidine kinase
BaLi_c34310	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
BaLi_c34320	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
BaLi_c34330	COG1335	isochorismatase
BaLi_c34340	COG5506	Protein of unknown function (DUF1694)
BaLi_c34370	COG0628	permease
BaLi_c34380	COG1959	2 iron, 2 sulfur cluster binding
BaLi_c34410	COG1418	mRNA catabolic process
BaLi_c34420	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c34450	COG1511	domain protein
BaLi_c34460	COG0433	COG0433 Predicted ATPase
BaLi_c34460	COG1674	ftsk spoiiie
BaLi_c34470	COG4499	WXG100 protein secretion system (Wss), protein YukC
BaLi_c34480	COG5417	Belongs to the EsaB family
BaLi_c34490	COG4842	Belongs to the WXG100 family
BaLi_c34500	COG1115	amino acid carrier protein
BaLi_c34510	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
BaLi_c34510	COG2508	Transcriptional regulator
BaLi_c34520	COG0686	Belongs to the AlaDH PNT family
BaLi_c34530	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
BaLi_c34540	COG1268	BioY protein
BaLi_c34550	COG2056	Na+-H+ antiporter family
BaLi_c34560	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
BaLi_c34570	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
BaLi_c34580	COG3584	3D domain protein
BaLi_c34600	COG1252	NADH dehydrogenase
BaLi_c34610	COG0492	ferredoxin-NADP+ reductase activity
BaLi_c34640	COG0454	-acetyltransferase
BaLi_c34650	COG0316	Belongs to the HesB IscA family
BaLi_c34660	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
BaLi_c34670	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BaLi_c34680	COG4844	belongs to the
BaLi_c34690	COG1252	NADH dehydrogenase
BaLi_c34700	COG2323	membrane
BaLi_c34710	COG1633	Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME)
BaLi_c34720	COG5646	InterPro IPR014922
BaLi_c34740	COG0457	Tetratricopeptide repeat
BaLi_c34750	COG3479	Phenolic acid decarboxylase
BaLi_c34770	COG4837	Protein of unknown function (DUF1462)
BaLi_c34780	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
BaLi_c34790	COG4946	Tricorn protease homolog
BaLi_c34790	COG1506	peptidase
BaLi_c34790	COG0823	Involved in the tonB-independent uptake of proteins
BaLi_c34800	COG0083	homoserine kinase activity
BaLi_c34810	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
BaLi_c34820	COG0460	homoserine dehydrogenase
BaLi_c34830	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BaLi_c34840	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
BaLi_c34850	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
BaLi_c34860	COG0647	UMP catabolic process
BaLi_c34870	COG2445	Protein of unknown function DUF86
BaLi_c34880	COG4470	Protein conserved in bacteria
BaLi_c34910	COG0739	heme binding
BaLi_c34920	COG0733	neurotransmitter:sodium symporter activity
BaLi_c34940	COG3377	Domain of unknown function (DUF1805)
BaLi_c34950	COG0737	Belongs to the 5'-nucleotidase family
BaLi_c34960	COG0730	response to heat
BaLi_c34970	COG1801	Protein of unknown function DUF72
BaLi_c34990	COG3226	Transcriptional regulator
BaLi_c35000	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
BaLi_c35010	COG2508	Transcriptional regulator
BaLi_c35020	COG2814	Major facilitator Superfamily
BaLi_c35030	COG1288	antiporter activity
BaLi_c35040	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
BaLi_c35050	COG2356	endonuclease I
BaLi_c35070	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
BaLi_c35100	COG0457	Tetratricopeptide repeat
BaLi_c35110	COG0719	Fe-S assembly protein
BaLi_c35120	COG0822	iron-sulfur transferase activity
BaLi_c35130	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BaLi_c35140	COG0719	Fe-S assembly protein
BaLi_c35150	COG0396	ATPase activity
BaLi_c35180	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BaLi_c35190	COG1464	Belongs to the NlpA lipoprotein family
BaLi_c35200	COG2011	ABC-type metal ion transport system permease component
BaLi_c35210	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
BaLi_c35230	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
BaLi_c35240	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
BaLi_c35260	COG0509	glycine decarboxylation via glycine cleavage system
BaLi_c35270	COG1393	Belongs to the ArsC family
BaLi_c35280	COG1960	acyl-CoA dehydrogenase activity
BaLi_c35290	COG0183	Belongs to the thiolase family
BaLi_c35300	COG1024	Enoyl-CoA hydratase
BaLi_c35300	COG1250	3-hydroxyacyl-CoA dehydrogenase
BaLi_c35330	COG5577	PFAM Coat F domain
BaLi_c35360	COG1120	ATPase activity
BaLi_c35370	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c35380	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c35390	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c35420	COG1686	Belongs to the peptidase S11 family
BaLi_c35430	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c35440	COG0783	Belongs to the Dps family
BaLi_c35450	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BaLi_c35460	COG0745	RESPONSE REGULATOR receiver
BaLi_c35470	COG2205	protein histidine kinase activity
BaLi_c35470	COG2770	Histidine kinase
BaLi_c35480	COG1309	transcriptional regulator
BaLi_c35490	COG0114	fumarate hydratase activity
BaLi_c35510	COG0697	spore germination
BaLi_c35520	COG0814	amino acid
BaLi_c35550	COG2197	response regulator
BaLi_c35560	COG4585	Histidine kinase
BaLi_c35570	COG4758	membrane
BaLi_c35590	COG1842	Phage shock protein A
BaLi_c35600	COG4758	membrane
BaLi_c35610	COG4677	pectinesterase activity
BaLi_c35620	COG2096	Adenosyltransferase
BaLi_c35630	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c35640	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BaLi_c35670	COG1454	alcohol dehydrogenase
BaLi_c35680	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BaLi_c35690	COG1120	ATPase activity
BaLi_c35700	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c35710	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c35720	COG1802	Transcriptional regulator
BaLi_c35730	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c35740	COG2258	MOSC domain
BaLi_c35750	COG0583	DNA-binding transcription factor activity
BaLi_c35770	COG2721	sulfolactate sulfo-lyase activity
BaLi_c35780	COG0246	Mannitol dehydrogenase
BaLi_c35790	COG1609	Transcriptional regulator
BaLi_c35800	COG2211	Major facilitator Superfamily
BaLi_c35810	COG1904	glucuronate isomerase
BaLi_c35820	COG2205	protein histidine kinase activity
BaLi_c35830	COG0745	RESPONSE REGULATOR receiver
BaLi_c35840	COG1120	ATPase activity
BaLi_c35850	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c35860	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c35870	COG0531	amino acid
BaLi_c35880	COG1988	membrane-bound metal-dependent
BaLi_c35890	COG1368	sulfuric ester hydrolase activity
BaLi_c35900	COG2814	Major facilitator Superfamily
BaLi_c35910	COG0656	L-ascorbic acid biosynthetic process
BaLi_c35920	COG1940	carbohydrate kinase activity
BaLi_c35930	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
BaLi_c35950	COG0596	Alpha beta hydrolase
BaLi_c35960	COG3973	AAA domain
BaLi_c35970	COG2860	membrane
BaLi_c35980	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
BaLi_c35980	COG0456	acetyltransferase
BaLi_c35990	COG0456	acetyltransferase
BaLi_c36000	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
BaLi_c36010	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
BaLi_c36020	COG2217	Heavy metal translocating P-type atpase
BaLi_c36030	COG1653	transport
BaLi_c36040	COG1175	transmembrane transport
BaLi_c36050	COG0395	ABC-type sugar transport system, permease component
BaLi_c36060	COG1501	Belongs to the glycosyl hydrolase 31 family
BaLi_c36070	COG1472	Belongs to the glycosyl hydrolase 3 family
BaLi_c36080	COG1121	(ABC) transporter
BaLi_c36090	COG1108	ABC-type Mn2 Zn2 transport systems permease components
BaLi_c36100	COG0803	Belongs to the bacterial solute-binding protein 9 family
BaLi_c36140	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c36140	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
BaLi_c36140	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c36150	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c36170	COG2217	Heavy metal translocating P-type atpase
BaLi_c36180	COG2608	mercury ion transmembrane transporter activity
BaLi_c36190	COG1937	Protein conserved in bacteria
BaLi_c36200	COG0693	protein deglycase activity
BaLi_c36210	COG1349	DNA-binding transcription factor activity
BaLi_c36220	COG1070	Carbohydrate kinase
BaLi_c36230	COG4952	isomerase
BaLi_c36250	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c36250	COG3347	Dehydrogenase
BaLi_c36260	COG2814	Major facilitator Superfamily
BaLi_c36270	COG2814	Major facilitator Superfamily
BaLi_c36290	COG2124	cytochrome p450
BaLi_c36310	COG1846	Transcriptional regulator
BaLi_c36330	COG0673	inositol 2-dehydrogenase activity
BaLi_c36340	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
BaLi_c36370	COG1191	sigma factor activity
BaLi_c36390	COG2140	Oxalate decarboxylase
BaLi_c36430	COG5520	Belongs to the glycosyl hydrolase 30 family
BaLi_c36440	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c36470	COG5444	nuclease activity
BaLi_c36480	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
BaLi_c36490	COG0557	exoribonuclease II activity
BaLi_c36500	COG1647	Serine aminopeptidase, S33
BaLi_c36510	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
BaLi_c36520	COG2002	toxin-antitoxin pair type II binding
BaLi_c36530	COG1476	TRANSCRIPTIONal
BaLi_c36540	COG1396	sequence-specific DNA binding
BaLi_c36550	COG1396	sequence-specific DNA binding
BaLi_c36560	COG1174	glycine betaine transport
BaLi_c36570	COG1732	Glycine betaine
BaLi_c36580	COG1174	glycine betaine transport
BaLi_c36590	COG1125	glycine betaine transport
BaLi_c36590	COG0517	IMP dehydrogenase activity
BaLi_c36600	COG1510	regulation of RNA biosynthetic process
BaLi_c36610	COG2095	MarC family integral membrane protein
BaLi_c36620	COG3064	Membrane
BaLi_c36630	COG4640	response to antibiotic
BaLi_c36640	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c36670	COG0693	protein deglycase activity
BaLi_c36680	COG0148	phosphopyruvate hydratase activity
BaLi_c36690	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
BaLi_c36700	COG0149	triose-phosphate isomerase activity
BaLi_c36710	COG0126	phosphoglycerate kinase activity
BaLi_c36720	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
BaLi_c36730	COG2390	Transcriptional regulator
BaLi_c36740	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BaLi_c36750	COG1113	amino acid transport
BaLi_c36790	COG1556	Lactate utilization protein
BaLi_c36800	COG1139	Iron-sulfur cluster binding protein
BaLi_c36810	COG0247	lactate metabolic process
BaLi_c36820	COG2186	Transcriptional regulator
BaLi_c36830	COG1620	l-lactate permease
BaLi_c36840	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
BaLi_c36860	COG5039	Polysaccharide pyruvyl transferase
BaLi_c36870	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BaLi_c36880	COG0110	maltose O-acetyltransferase activity
BaLi_c36890	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
BaLi_c36900	COG2244	polysaccharide biosynthetic process
BaLi_c36910	COG1216	Glycosyl transferase, family 2
BaLi_c36920	COG5039	Polysaccharide pyruvyl transferase
BaLi_c36930	COG1216	Glycosyl transferase, family 2
BaLi_c36950	COG0438	transferase activity, transferring glycosyl groups
BaLi_c36960	COG1215	transferase activity, transferring glycosyl groups
BaLi_c36970	COG0438	transferase activity, transferring glycosyl groups
BaLi_c36980	COG1086	Polysaccharide biosynthesis protein
BaLi_c36990	COG0489	protein tyrosine kinase activity
BaLi_c37000	COG3944	biosynthesis protein
BaLi_c37010	COG1396	sequence-specific DNA binding
BaLi_c37020	COG2249	NAD(P)H dehydrogenase (quinone) activity
BaLi_c37030	COG2271	Major facilitator Superfamily
BaLi_c37050	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
BaLi_c37070	COG1454	alcohol dehydrogenase
BaLi_c37080	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
BaLi_c37100	COG1733	regulation of RNA biosynthetic process
BaLi_c37110	COG1902	pentaerythritol trinitrate reductase activity
BaLi_c37120	COG1621	beta-fructofuranosidase activity
BaLi_c37130	COG1621	beta-fructofuranosidase activity
BaLi_c37150	COG0740	serine-type endopeptidase activity
BaLi_c37160	COG1611	Belongs to the LOG family
BaLi_c37170	COG1694	Mazg nucleotide pyrophosphohydrolase
BaLi_c37180	COG1078	dGTPase activity
BaLi_c37190	COG0659	secondary active sulfate transmembrane transporter activity
BaLi_c37200	COG0288	reversible hydration of carbon dioxide
BaLi_c37210	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BaLi_c37220	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
BaLi_c37230	COG0640	Transcriptional regulator
BaLi_c37250	COG2732	(Barnase) inhibitor
BaLi_c37260	COG2162	N-hydroxyarylamine O-acetyltransferase activity
BaLi_c37270	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c37280	COG1481	regulation of sporulation
BaLi_c37290	COG0391	Required for morphogenesis under gluconeogenic growth conditions
BaLi_c37300	COG1660	Displays ATPase and GTPase activities
BaLi_c37310	COG1051	belongs to the nudix hydrolase family
BaLi_c37320	COG0492	ferredoxin-NADP+ reductase activity
BaLi_c37330	COG0457	Tetratricopeptide repeat
BaLi_c37340	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BaLi_c37350	COG0140	phosphoribosyl-ATP diphosphatase activity
BaLi_c37350	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
BaLi_c37360	COG0107	imidazoleglycerol-phosphate synthase activity
BaLi_c37370	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
BaLi_c37380	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
BaLi_c37390	COG0131	Imidazoleglycerol-phosphate dehydratase
BaLi_c37400	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
BaLi_c37410	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
BaLi_c37420	COG3705	Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine
BaLi_c37430	COG4990	cell redox homeostasis
BaLi_c37440	COG5297	Belongs to the glycosyl hydrolase family 6
BaLi_c37450	COG0110	maltose O-acetyltransferase activity
BaLi_c37460	COG0546	phosphoglycolate phosphatase activity
BaLi_c37470	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
BaLi_c37480	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
BaLi_c37490	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
BaLi_c37500	COG1846	Transcriptional regulator
BaLi_c37510	COG2814	Major facilitator Superfamily
BaLi_c37520	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
BaLi_c37530	COG1950	PFAM Membrane protein of
BaLi_c37540	COG1983	PspC domain protein
BaLi_c37550	COG3595	metallopeptidase activity
BaLi_c37580	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
BaLi_c37590	COG0556	nucleotide-excision repair
BaLi_c37600	COG4897	Protein conserved in bacteria
BaLi_c37620	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BaLi_c37640	COG0793	Belongs to the peptidase S41A family
BaLi_c37640	COG3409	Peptidoglycan-binding domain 1 protein
BaLi_c37650	COG0473	3-isopropylmalate dehydrogenase activity
BaLi_c37660	COG3883	PFAM NLP P60 protein
BaLi_c37660	COG0791	NLP P60 protein
BaLi_c37670	COG2177	Part of the ABC transporter FtsEX involved in
BaLi_c37680	COG2884	Cell division ATP-binding protein ftsE
BaLi_c37690	COG2010	Cytochrome c
BaLi_c37700	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c37710	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
BaLi_c37720	COG0653	protein targeting
BaLi_c37730	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
BaLi_c37760	COG1516	flagellar protein fliS
BaLi_c37770	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
BaLi_c37780	COG1334	flagellar protein FlaG
BaLi_c37790	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BaLi_c37800	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
BaLi_c37810	COG1699	Binds to the C-terminal region of flagellin, which is implicated in polymerization, and participates in the assembly of the flagellum
BaLi_c37830	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
BaLi_c37840	COG4786	Flagellar basal body rod
BaLi_c37840	COG1256	bacterial-type flagellum assembly
BaLi_c37850	COG3418	PFAM FlgN family protein
BaLi_c37860	COG2747	anti-sigma28 factor FlgM
BaLi_c37880	COG1040	competence protein
BaLi_c37900	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
BaLi_c37910	COG1307	EDD domain protein, DegV family
BaLi_c37920	COG2197	response regulator
BaLi_c37930	COG4585	Histidine kinase
BaLi_c37940	COG1739	Uncharacterized protein family UPF0029
BaLi_c37950	COG1316	TRANSCRIPTIONal
BaLi_c37970	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
BaLi_c37980	COG0438	transferase activity, transferring glycosyl groups
BaLi_c37990	COG1215	transferase activity, transferring glycosyl groups
BaLi_c38000	COG3206	protein involved in exopolysaccharide biosynthesis
BaLi_c38010	COG3307	-O-antigen
BaLi_c38020	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
BaLi_c38030	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
BaLi_c38040	COG0438	transferase activity, transferring glycosyl groups
BaLi_c38040	COG0297	glycogen (starch) synthase activity
BaLi_c38050	COG2244	polysaccharide biosynthetic process
BaLi_c38070	COG2247	cell wall binding repeat
BaLi_c38070	COG0860	N-Acetylmuramoyl-L-alanine amidase
BaLi_c38080	COG2247	cell wall binding repeat
BaLi_c38080	COG2385	sporulation resulting in formation of a cellular spore
BaLi_c38100	COG1316	TRANSCRIPTIONal
BaLi_c38130	COG2801	Transposase and inactivated derivatives
BaLi_c38140	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
BaLi_c38150	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BaLi_c38160	COG1134	teichoic acid transport
BaLi_c38180	COG1134	teichoic acid transport
BaLi_c38190	COG1682	transport, permease protein
BaLi_c38210	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BaLi_c38220	COG1210	Utp--glucose-1-phosphate uridylyltransferase
BaLi_c38260	COG1134	teichoic acid transport
BaLi_c38270	COG1682	transport, permease protein
BaLi_c38280	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BaLi_c38280	COG0463	Glycosyl transferase, family 2
BaLi_c38290	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BaLi_c38300	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
BaLi_c38310	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
BaLi_c38320	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
BaLi_c38330	COG4193	domain, Protein
BaLi_c38340	COG1482	cell wall glycoprotein biosynthetic process
BaLi_c38380	COG0800	Aldolase
BaLi_c38390	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BaLi_c38400	COG1609	Transcriptional regulator
BaLi_c38410	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
BaLi_c38420	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c38430	COG1063	alcohol dehydrogenase
BaLi_c38440	COG2814	Major facilitator Superfamily
BaLi_c38450	COG1316	TRANSCRIPTIONal
BaLi_c38460	COG0561	phosphatase activity
BaLi_c38470	COG0791	NLP P60 protein
BaLi_c38490	COG2843	Capsule synthesis protein
BaLi_c38510	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
BaLi_c38520	COG1609	Transcriptional regulator
BaLi_c38530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BaLi_c38540	COG1869	D-ribose catabolic process
BaLi_c38550	COG1129	ABC transporter
BaLi_c38560	COG1172	Belongs to the binding-protein-dependent transport system permease family
BaLi_c38570	COG1879	ABC-type sugar transport system periplasmic component
BaLi_c38580	COG0583	DNA-binding transcription factor activity
BaLi_c38590	COG2226	methyltransferase
BaLi_c38600	COG3527	Alpha-acetolactate decarboxylase
BaLi_c38610	COG0028	Belongs to the TPP enzyme family
BaLi_c38620	COG0583	DNA-binding transcription factor activity
BaLi_c38630	COG0405	Gamma-glutamyltransferase
BaLi_c38640	COG1522	sequence-specific DNA binding
BaLi_c38650	COG2059	Chromate
BaLi_c38660	COG2059	Chromate
BaLi_c38670	COG4464	protein tyrosine phosphatase activity
BaLi_c38680	COG3944	biosynthesis protein
BaLi_c38700	COG4715	Zinc finger, swim domain protein
BaLi_c38710	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
BaLi_c38720	COG3878	Protein conserved in bacteria
BaLi_c38730	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
BaLi_c38760	COG0561	phosphatase activity
BaLi_c38770	COG1349	DNA-binding transcription factor activity
BaLi_c38790	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c38810	COG3732	PTS system glucitol sorbitol-specific
BaLi_c38850	COG0629	single-stranded DNA binding
BaLi_c38880	COG1970	mechanosensitive ion channel activity
BaLi_c38890	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
BaLi_c38900	COG4786	Flagellar basal body rod
BaLi_c38910	COG4786	Flagellar basal body rod
BaLi_c38920	COG1077	Cell shape determining protein MreB Mrl
BaLi_c38930	COG1609	Transcriptional regulator
BaLi_c38940	COG1846	Transcriptional regulator
BaLi_c38950	COG2814	Major facilitator Superfamily
BaLi_c38960	COG0671	phosphoesterase, PA-phosphatase related
BaLi_c38970	COG1227	inorganic diphosphatase activity
BaLi_c38980	COG3546	catalase activity
BaLi_c38990	COG3361	conserved protein (COG2071)
BaLi_c39020	COG0517	IMP dehydrogenase activity
BaLi_c39030	COG0598	Magnesium transport protein CorA
BaLi_c39040	COG1253	flavin adenine dinucleotide binding
BaLi_c39050	COG0004	ammonium transporteR
BaLi_c39060	COG0347	Belongs to the P(II) protein family
BaLi_c39080	COG0740	serine-type endopeptidase activity
BaLi_c39100	COG0739	heme binding
BaLi_c39110	COG1247	-acetyltransferase
BaLi_c39130	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BaLi_c39140	COG0477	Major facilitator Superfamily
BaLi_c39150	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c39160	COG1535	isochorismatase
BaLi_c39160	COG3433	isochorismatase activity
BaLi_c39170	COG1021	2,3-dihydroxybenzoate-AMP ligase
BaLi_c39180	COG1169	isochorismate synthase
BaLi_c39190	COG1028	Short-chain dehydrogenase reductase Sdr
BaLi_c39200	COG2819	hydrolase of the alpha beta superfamily
BaLi_c39210	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c39220	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c39230	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c39240	COG2207	Transcriptional regulator
BaLi_c39240	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c39260	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
BaLi_c39270	COG1959	2 iron, 2 sulfur cluster binding
BaLi_c39290	COG1994	Peptidase M50
BaLi_c39300	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
BaLi_c39310	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
BaLi_c39330	COG3383	formate dehydrogenase (NAD+) activity
BaLi_c39340	COG2304	oxidoreductase activity
BaLi_c39350	COG2304	oxidoreductase activity
BaLi_c39360	COG2385	sporulation resulting in formation of a cellular spore
BaLi_c39370	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BaLi_c39390	COG4836	Membrane
BaLi_c39400	COG0355	proton-transporting ATP synthase activity, rotational mechanism
BaLi_c39410	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
BaLi_c39420	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
BaLi_c39430	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
BaLi_c39440	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BaLi_c39450	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
BaLi_c39460	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
BaLi_c39470	COG0356	it plays a direct role in the translocation of protons across the membrane
BaLi_c39490	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
BaLi_c39500	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
BaLi_c39510	COG4475	Protein of unknown function (DUF436)
BaLi_c39520	COG0698	ribose 5-phosphate isomerase
BaLi_c39530	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
BaLi_c39540	COG1971	Probably functions as a manganese efflux pump
BaLi_c39550	COG0009	L-threonylcarbamoyladenylate synthase
BaLi_c39560	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
BaLi_c39580	COG0738	Major facilitator superfamily
BaLi_c39590	COG0673	inositol 2-dehydrogenase activity
BaLi_c39600	COG0561	phosphatase activity
BaLi_c39610	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
BaLi_c39620	COG1609	Transcriptional regulator
BaLi_c39640	COG2890	protein-(glutamine-N5) methyltransferase activity
BaLi_c39650	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
BaLi_c39660	COG0346	lactoylglutathione lyase activity
BaLi_c39670	COG0789	Transcriptional regulator
BaLi_c39680	COG0679	Auxin Efflux Carrier
BaLi_c39690	COG0281	malic enzyme
BaLi_c39700	COG1435	thymidine kinase activity
BaLi_c39710	COG0254	rRNA binding
BaLi_c39720	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
BaLi_c39730	COG1494	fructose-1,6-bisphosphatase
BaLi_c39740	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
BaLi_c39750	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
BaLi_c39760	COG0191	fructose-bisphosphate aldolase activity
BaLi_c39770	COG2204	response regulator
BaLi_c39780	COG4821	SIS domain
BaLi_c39790	COG0504	CTP synthase activity
BaLi_c39800	COG3343	RNA polymerase activity
BaLi_c39810	COG1960	acyl-CoA dehydrogenase activity
BaLi_c39820	COG1960	acyl-CoA dehydrogenase activity
BaLi_c39830	COG1250	3-hydroxyacyl-CoA dehydrogenase
BaLi_c39840	COG0183	Belongs to the thiolase family
BaLi_c39850	COG0247	lactate metabolic process
BaLi_c39850	COG2181	nitrate reductase activity
BaLi_c39860	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
BaLi_c39880	COG0018	arginyl-trna synthetase
BaLi_c39890	COG4506	Protein conserved in bacteria
BaLi_c39900	COG0010	Belongs to the arginase family
BaLi_c39910	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
BaLi_c39920	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
BaLi_c39940	COG1994	Peptidase M50
BaLi_c39950	COG1942	4-Oxalocrotonate Tautomerase
BaLi_c39970	COG3465	dGTPase activity
BaLi_c39980	COG1078	dGTPase activity
BaLi_c39990	COG4844	belongs to the
BaLi_c40040	COG2814	Major facilitator Superfamily
BaLi_c40090	COG1414	Transcriptional regulator
BaLi_c40110	COG0280	phosphate acetyltransferase
BaLi_c40150	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
BaLi_c40190	COG1131	(ABC) transporter
BaLi_c40220	COG2363	Small membrane protein
BaLi_c40230	COG2233	PERMEase
BaLi_c40250	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c40260	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
BaLi_c40270	COG1216	Glycosyl transferase, family 2
BaLi_c40280	COG0351	phosphomethylpyrimidine kinase
BaLi_c40300	COG1621	beta-fructofuranosidase activity
BaLi_c40310	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c40310	COG1263	PTS System
BaLi_c40320	COG3711	transcriptional antiterminator
BaLi_c40340	COG1404	Belongs to the peptidase S8 family
BaLi_c40360	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
BaLi_c40370	COG0778	Nitroreductase
BaLi_c40380	COG1473	amidohydrolase
BaLi_c40390	COG0772	Belongs to the SEDS family
BaLi_c40400	COG0772	Belongs to the SEDS family
BaLi_c40440	COG0456	acetyltransferase
BaLi_c40510	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
BaLi_c40530	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
BaLi_c40540	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
BaLi_c40550	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BaLi_c40560	COG0655	NAD(P)H dehydrogenase (quinone) activity
BaLi_c40570	COG3162	membrane
BaLi_c40580	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c40590	COG1070	Carbohydrate kinase
BaLi_c40600	COG2115	Belongs to the xylose isomerase family
BaLi_c40610	COG1940	carbohydrate kinase activity
BaLi_c40620	COG0352	thiamine-phosphate diphosphorylase activity
BaLi_c40630	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
BaLi_c40640	COG0583	DNA-binding transcription factor activity
BaLi_c40670	COG1380	Effector of murein hydrolase LrgA
BaLi_c40680	COG1346	cytolysis
BaLi_c40690	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
BaLi_c40700	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
BaLi_c40710	COG0346	lactoylglutathione lyase activity
BaLi_c40720	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
BaLi_c40730	COG1442	glycosyl transferase family 8
BaLi_c40740	COG4585	Histidine kinase
BaLi_c40750	COG2197	response regulator
BaLi_c40760	COG2409	Drug exporters of the RND superfamily
BaLi_c40770	COG5522	Integral membrane protein (intg_mem_TP0381)
BaLi_c40780	COG2271	Major facilitator Superfamily
BaLi_c40790	COG4948	Mandelate Racemase Muconate Lactonizing
BaLi_c40800	COG0800	Aldolase
BaLi_c40810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BaLi_c40830	COG2234	aminopeptidase activity
BaLi_c40840	COG0477	Major facilitator Superfamily
BaLi_c40870	COG2357	RelA SpoT domain protein
BaLi_c40890	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
BaLi_c40900	COG1696	Membrane protein involved in D-alanine export
BaLi_c40910	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
BaLi_c40920	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
BaLi_c40930	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
BaLi_c40940	COG2814	Major facilitator Superfamily
BaLi_c40950	COG1486	melibiose metabolic process
BaLi_c40960	COG1447	Phosphotransferase system cellobiose-specific component IIA
BaLi_c40970	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c40980	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c40990	COG3711	transcriptional antiterminator
BaLi_c40990	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
BaLi_c41010	COG2094	Belongs to the DNA glycosylase MPG family
BaLi_c41030	COG0372	Belongs to the citrate synthase family
BaLi_c41040	COG2079	MmgE PrpD family protein
BaLi_c41050	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
BaLi_c41080	COG1132	(ABC) transporter
BaLi_c41090	COG2755	lipolytic protein G-D-S-L family
BaLi_c41120	COG2814	Major facilitator Superfamily
BaLi_c41130	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
BaLi_c41140	COG1131	(ABC) transporter
BaLi_c41180	COG1595	DNA-templated transcription, initiation
BaLi_c41190	COG2814	Major facilitator Superfamily
BaLi_c41210	COG0753	catalase activity
BaLi_c41230	COG0753	catalase activity
BaLi_c41240	COG0735	belongs to the Fur family
BaLi_c41260	COG3866	Pectate lyase
BaLi_c41270	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
BaLi_c41280	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
BaLi_c41290	COG4988	ABC transporter
BaLi_c41300	COG1294	oxidase, subunit
BaLi_c41310	COG1271	oxidase subunit
BaLi_c41320	COG2116	formate transmembrane transporter activity
BaLi_c41340	COG0281	malic enzyme
BaLi_c41350	COG1757	Na H antiporter
BaLi_c41360	COG1027	Aspartate ammonia-lyase
BaLi_c41370	COG0252	asparaginase activity
BaLi_c41380	COG1396	sequence-specific DNA binding
BaLi_c41390	COG2706	6-phosphogluconolactonase activity
BaLi_c41400	COG0745	RESPONSE REGULATOR receiver
BaLi_c41410	COG2205	protein histidine kinase activity
BaLi_c41420	COG1136	(ABC) transporter
BaLi_c41430	COG0577	efflux transmembrane transporter activity
BaLi_c41440	COG5294	Protein conserved in bacteria
BaLi_c41470	COG0726	polysaccharide deacetylase
BaLi_c41480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
BaLi_c41500	COG1215	transferase activity, transferring glycosyl groups
BaLi_c41510	COG3493	citrate carrier protein
BaLi_c41520	COG0584	glycerophosphoryl diester phosphodiesterase
BaLi_c41550	COG1368	sulfuric ester hydrolase activity
BaLi_c41570	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
BaLi_c41590	COG2235	arginine
BaLi_c41600	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
BaLi_c41620	COG0549	Belongs to the carbamate kinase family
BaLi_c41640	COG2723	6-phospho-beta-galactosidase activity
BaLi_c41650	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
BaLi_c41670	COG1595	DNA-templated transcription, initiation
BaLi_c41690	COG2195	Cleaves the N-terminal amino acid of tripeptides
BaLi_c41710	COG2223	nitrite transmembrane transporter activity
BaLi_c41720	COG0395	ABC-type sugar transport system, permease component
BaLi_c41730	COG1175	transmembrane transport
BaLi_c41750	COG1609	Transcriptional regulator
BaLi_c41790	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
BaLi_c41800	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BaLi_c41810	COG0463	Glycosyl transferase, family 2
BaLi_c41820	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BaLi_c41870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BaLi_c41890	COG0693	protein deglycase activity
BaLi_c41890	COG0753	catalase activity
BaLi_c41910	COG2723	6-phospho-beta-galactosidase activity
BaLi_c41920	COG1263	PTS System
BaLi_c41920	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c41920	COG2190	(PTS) system
BaLi_c41930	COG3711	transcriptional antiterminator
BaLi_c41940	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
BaLi_c41950	COG1122	ATPase activity
BaLi_c41960	COG4721	ABC-type cobalt transport system, permease component
BaLi_c41970	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
BaLi_c41990	COG2224	Isocitrate lyase
BaLi_c42000	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
BaLi_c42010	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
BaLi_c42020	COG0577	efflux transmembrane transporter activity
BaLi_c42030	COG1136	(ABC) transporter
BaLi_c42040	COG2205	protein histidine kinase activity
BaLi_c42050	COG0745	RESPONSE REGULATOR receiver
BaLi_c42060	COG2723	6-phospho-beta-galactosidase activity
BaLi_c42070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c42070	COG2190	(PTS) system
BaLi_c42070	COG1263	PTS System
BaLi_c42090	COG3049	Linear amide C-N hydrolases, choloylglycine hydrolase family
BaLi_c42100	COG3507	Belongs to the glycosyl hydrolase 43 family
BaLi_c42110	COG0513	Belongs to the DEAD box helicase family
BaLi_c42190	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
BaLi_c42200	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
BaLi_c42210	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
BaLi_c42220	COG2390	Transcriptional regulator
BaLi_c42230	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
BaLi_c42240	COG3706	GGDEF domain
BaLi_c42250	COG5298	Protein conserved in bacteria
BaLi_c42260	COG1215	transferase activity, transferring glycosyl groups
BaLi_c42280	COG3977	Valine--pyruvate aminotransferase
BaLi_c42310	COG1181	Belongs to the D-alanine--D-alanine ligase family
BaLi_c42330	COG0191	fructose-bisphosphate aldolase activity
BaLi_c42340	COG1082	Xylose isomerase domain protein TIM barrel
BaLi_c42350	COG1082	Xylose isomerase domain protein TIM barrel
BaLi_c42360	COG0673	inositol 2-dehydrogenase activity
BaLi_c42370	COG2814	Major facilitator Superfamily
BaLi_c42380	COG1082	Xylose isomerase domain protein TIM barrel
BaLi_c42390	COG3962	Belongs to the TPP enzyme family
BaLi_c42400	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
BaLi_c42410	COG3718	enzyme involved in inositol metabolism
BaLi_c42420	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c42430	COG1349	DNA-binding transcription factor activity
BaLi_c42440	COG0667	Aldo Keto reductase
BaLi_c42450	COG0584	glycerophosphoryl diester phosphodiesterase
BaLi_c42460	COG2271	Major facilitator Superfamily
BaLi_c42470	COG0326	Molecular chaperone. Has ATPase activity
BaLi_c42480	COG0488	(ABC) transporter
BaLi_c42490	COG0561	phosphatase activity
BaLi_c42530	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c42580	COG3936	Protein involved in polysaccharide intercellular adhesin (PIA) synthesis biofilm formation
BaLi_c42590	COG0577	efflux transmembrane transporter activity
BaLi_c42600	COG1136	(ABC) transporter
BaLi_c42610	COG2205	protein histidine kinase activity
BaLi_c42620	COG0745	RESPONSE REGULATOR receiver
BaLi_c42640	COG5278	phosphoserine phosphatase activity
BaLi_c42640	COG0840	transmembrane signaling receptor activity
BaLi_c42650	COG1115	amino acid carrier protein
BaLi_c42660	COG0686	Belongs to the AlaDH PNT family
BaLi_c42670	COG3867	Arabinogalactan endo-beta-1,4-galactanase
BaLi_c42680	COG1874	Beta-galactosidase
BaLi_c42690	COG3833	ABC-type maltose transport systems, permease component
BaLi_c42700	COG1175	transmembrane transport
BaLi_c42710	COG2182	Extracellular solute-binding protein
BaLi_c42720	COG1609	Transcriptional regulator
BaLi_c42730	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
BaLi_c42740	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
BaLi_c42750	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
BaLi_c42760	COG1940	carbohydrate kinase activity
BaLi_c42780	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
BaLi_c42840	COG1454	alcohol dehydrogenase
BaLi_c42840	COG1012	belongs to the aldehyde dehydrogenase family
BaLi_c42850	COG0450	alkyl hydroperoxide reductase
BaLi_c42860	COG3634	alkyl hydroperoxide reductase activity
BaLi_c42870	COG1113	amino acid transport
BaLi_c42920	COG3855	fructose 1,6-bisphosphate 1-phosphatase activity
BaLi_c42930	COG3634	alkyl hydroperoxide reductase activity
BaLi_c42950	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
BaLi_c42960	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c42970	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
BaLi_c43000	COG1131	(ABC) transporter
BaLi_c43010	COG0842	Transport permease protein
BaLi_c43020	COG4585	Histidine kinase
BaLi_c43030	COG2197	response regulator
BaLi_c43040	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
BaLi_c43060	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
BaLi_c43090	COG0456	acetyltransferase
BaLi_c43120	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
BaLi_c43130	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
BaLi_c43140	COG4853	Protein conserved in bacteria
BaLi_c43150	COG4863	YycH protein
BaLi_c43160	COG5002	protein histidine kinase activity
BaLi_c43170	COG0745	RESPONSE REGULATOR receiver
BaLi_c43230	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
BaLi_c43250	COG0305	Participates in initiation and elongation during chromosome replication
BaLi_c43280	COG3093	addiction module antidote protein HigA
BaLi_c43290	COG2807	transmembrane transport
BaLi_c43300	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
BaLi_c43310	COG0363	glucosamine-6-phosphate deaminase activity
BaLi_c43330	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
BaLi_c43340	COG1263	PTS System
BaLi_c43340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
BaLi_c43350	COG0359	binds to the 23S rRNA
BaLi_c43360	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
BaLi_c43370	COG4241	membrane
BaLi_c43390	COG5577	PFAM Coat F domain
BaLi_c43400	COG0589	response to stress
BaLi_c43410	COG0659	secondary active sulfate transmembrane transporter activity
BaLi_c43420	COG2271	Major facilitator Superfamily
BaLi_c43430	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
BaLi_c43440	COG0629	single-stranded DNA binding
BaLi_c43450	COG0360	Binds together with S18 to 16S ribosomal RNA
BaLi_c43460	COG0012	GTP binding
BaLi_c43470	COG4481	Protein conserved in bacteria
BaLi_c43480	COG3949	Membrane
BaLi_c43500	COG1475	DNA binding
BaLi_c43510	COG1192	Involved in chromosome partitioning
BaLi_c43520	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
BaLi_c43530	COG1595	DNA-templated transcription, initiation
BaLi_c43540	COG1475	DNA binding
BaLi_c43550	COG0357	Ribosomal RNA small subunit methyltransferase G
BaLi_c43560	COG0445	tRNA wobble uridine modification
BaLi_c43570	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
BaLi_c43580	COG1847	R3H domain protein
BaLi_c43590	COG0706	membrane insertase activity
BaLi_c43600	COG0594	ribonuclease P activity
BaLi_c43610	COG0230	Belongs to the bacterial ribosomal protein bL34 family