locus-tag	class	description
KY997_00015	PF00005	ABC transporter
KY997_00030	PF00196	Bacterial regulatory proteins, luxR family
KY997_00030	PF00072	Response regulator receiver domain
KY997_00055	PF14116	YyzF-like protein
KY997_00065	PF00583	Acetyltransferase (GNAT) family
KY997_00085	PF00753	Metallo-beta-lactamase superfamily
KY997_00090	PF09648	YycH protein
KY997_00095	PF07435	YycH protein
KY997_00100	PF13426	PAS domain
KY997_00100	PF00512	His Kinase A (phospho-acceptor) domain
KY997_00100	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_00100	PF00672	HAMP domain
KY997_00130	PF00293	NUDIX domain
KY997_00145	PF00772	DnaB-like helicase N terminal domain
KY997_00145	PF03796	DnaB-like helicase C terminal domain
KY997_00150	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
KY997_00160	PF14174	YycC-like protein
KY997_00165	PF07690	Major Facilitator Superfamily
KY997_00170	PF01979	Amidohydrolase family
KY997_00180	PF07702	UTRA domain
KY997_00180	PF00392	Bacterial regulatory proteins, gntR family
KY997_00185	PF01380	SIS domain
KY997_00190	PF00367	phosphotransferase system, EIIB
KY997_00190	PF02378	Phosphotransferase system, EIIC 
KY997_00195	PF03948	Ribosomal protein L9, C-terminal domain
KY997_00195	PF01281	Ribosomal protein L9, N-terminal domain
KY997_00200	PF01368	DHH family
KY997_00200	PF02272	DHHA1 domain
KY997_00205	PF09991	Predicted membrane protein (DUF2232)
KY997_00215	PF07875	Coat F domain
KY997_00220	PF00582	Universal stress protein family
KY997_00225	PF01740	STAS domain
KY997_00225	PF00916	Sulfate permease family
KY997_00230	PF07690	Major Facilitator Superfamily
KY997_00235	PF01084	Ribosomal protein S18
KY997_00240	PF00436	Single-strand binding protein family
KY997_00245	PF01250	Ribosomal protein S6
KY997_00250	PF01926	50S ribosome-binding GTPase
KY997_00250	PF06071	Protein of unknown function (DUF933)
KY997_00255	PF06107	Bacterial protein of unknown function (DUF951)
KY997_00265	PF06866	Protein of unknown function (DUF1256)
KY997_00270	PF02195	ParB-like nuclease domain
KY997_00270	PF17762	HTH domain found in ParB protein
KY997_00275	PF13614	AAA domain
KY997_00280	PF02627	Carboxymuconolactone decarboxylase family
KY997_00285	PF04542	Sigma-70 region 2 
KY997_00285	PF08281	Sigma-70, region 4
KY997_00285	PF12680	SnoaL-like domain
KY997_00295	PF02527	rRNA small subunit methyltransferase G
KY997_00305	PF10396	GTP-binding protein TrmE N-terminus
KY997_00305	PF12631	MnmE helical domain
KY997_00305	PF01926	50S ribosome-binding GTPase
KY997_00310	PF14804	Jag N-terminus
KY997_00310	PF01424	R3H domain
KY997_00315	PF02096	60Kd inner membrane protein
KY997_00325	PF00468	Ribosomal protein L34
KY997_00330	PF08299	Bacterial dnaA protein helix-turn-helix
KY997_00330	PF00308	Bacterial dnaA  protein
KY997_00330	PF11638	DnaA N-terminal domain
KY997_00350	PF04025	Domain of unknown function (DUF370)
KY997_00360	PF00521	DNA gyrase/topoisomerase IV, subunit A
KY997_00360	PF03989	DNA gyrase C-terminal domain, beta-propeller
KY997_00395	PF00478	IMP dehydrogenase / GMP reductase domain
KY997_00395	PF00571	CBS domain
KY997_00400	PF07943	Penicillin-binding protein 5, C-terminal domain
KY997_00400	PF00768	D-alanyl-D-alanine carboxypeptidase
KY997_00405	PF01680	SOR/SNZ family
KY997_00410	PF01174	SNO glutamine amidotransferase family
KY997_00430	PF05651	Putative sugar diacid recognition
KY997_00430	PF17853	GGDEF-like domain
KY997_00430	PF13556	PucR C-terminal helix-turn-helix domain
KY997_00445	PF01712	Deoxynucleoside kinase
KY997_00450	PF01712	Deoxynucleoside kinase
KY997_00460	PF00857	Isochorismatase family
KY997_00465	PF14437	MafB19-like deaminase
KY997_00475	PF12169	DNA polymerase III subunits gamma and tau domain III
KY997_00480	PF02575	YbaB/EbfC DNA-binding family
KY997_00485	PF02132	RecR protein
KY997_00485	PF13662	Toprim domain
KY997_00490	PF10704	Protein of unknown function (DUF2508)
KY997_00495	PF07441	SigmaK-factor processing regulatory protein BofA
KY997_00525	PF10764	Inhibitor of sigma-G Gin
KY997_00530	PF10112	5-bromo-4-chloroindolyl phosphate hydrolysis protein
KY997_00545	PF02223	Thymidylate kinase
KY997_00550	PF06153	Cyclic-di-AMP receptor
KY997_00555	PF03885	Protein of unknown function (DUF327)
KY997_00570	PF06156	Initiation control protein YabA
KY997_00575	PF05175	Methyltransferase small domain
KY997_00580	PF01541	GIY-YIG catalytic domain
KY997_00585	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
KY997_00590	PF18277	AbrB C-terminal domain
KY997_00590	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
KY997_00600	PF01026	TatD related DNase
KY997_00605	PF03990	G5-linked-Ubiquitin-like domain
KY997_00605	PF07501	G5 domain
KY997_00605	PF06725	3D domain
KY997_00610	PF13331	Domain of unknown function (DUF4093)
KY997_00610	PF13662	Toprim domain
KY997_00615	PF00398	Ribosomal RNA adenine dimethylase
KY997_00625	PF06257	Biofilm formation stimulator VEG
KY997_00630	PF00269	Small, acid-soluble spore proteins, alpha/beta type
KY997_00635	PF00288	GHMP kinases N terminal domain
KY997_00635	PF08544	GHMP kinases C terminal 
KY997_00640	PF09182	Bacterial purine repressor, N-terminal
KY997_00640	PF00156	Phosphoribosyl transferase domain
KY997_00645	PF01042	Endoribonuclease L-PSP
KY997_00650	PF04026	SpoVG
KY997_00660	PF14572	Phosphoribosyl synthetase-associated domain
KY997_00660	PF13793	N-terminal domain of ribose phosphate pyrophosphokinase
KY997_00665	PF01386	Ribosomal L25p family
KY997_00665	PF14693	Ribosomal protein TL5, C-terminal domain
KY997_00670	PF01195	Peptidyl-tRNA hydrolase
KY997_00675	PF10955	Protein of unknown function (DUF2757)
KY997_00705	PF07873	YabP family
KY997_00710	PF09578	Spore cortex protein YabQ (Spore_YabQ)
KY997_00720	PF00575	S1 RNA binding domain
KY997_00740	PF00092	von Willebrand factor type A domain
KY997_00755	PF00156	Phosphoribosyl transferase domain
KY997_00770	PF01430	Hsp33 protein
KY997_00775	PF13145	PPIC-type PPIASE domain
KY997_00785	PF04715	Anthranilate synthase component I, N terminal region
KY997_00785	PF00425	chorismate binding enzyme
KY997_00790	PF00117	Glutamine amidotransferase class-I
KY997_00795	PF01063	Amino-transferase class IV
KY997_00800	PF00809	Pterin binding enzyme
KY997_00805	PF02152	Dihydroneopterin aldolase
KY997_00815	PF01381	Helix-turn-helix
KY997_00820	PF01207	Dihydrouridine synthase (Dus)
KY997_00825	PF01336	OB-fold nucleic acid binding domain
KY997_00825	PF00152	tRNA synthetases class II (D, K and N) 
KY997_00905	PF05848	CtsR N-terminal HTH domain
KY997_00905	PF17727	CtsR C-terminal dimerization domain
KY997_00915	PF00217	ATP:guanido phosphotransferase, C-terminal catalytic domain
KY997_00940	PF01128	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
KY997_00945	PF02542	YgbB family
KY997_00950	PF00749	tRNA synthetases class I (E and Q), catalytic domain
KY997_00955	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_00960	PF09190	DALR domain
KY997_00960	PF01406	tRNA synthetases class I (C) catalytic domain
KY997_00965	PF00636	Ribonuclease III domain
KY997_00970	PF00588	SpoU rRNA Methylase family
KY997_00970	PF08032	RNA 2'-O ribose methyltransferase substrate binding
KY997_00975	PF05991	YacP-like NYN domain
KY997_00980	PF04542	Sigma-70 region 2 
KY997_00980	PF08281	Sigma-70, region 4
KY997_00985	PF00471	Ribosomal protein L33
KY997_00990	PF00584	SecE/Sec61-gamma subunits of protein translocation complex
KY997_01000	PF03946	Ribosomal protein L11, N-terminal domain
KY997_01000	PF00298	Ribosomal protein L11, RNA binding domain
KY997_01005	PF00687	Ribosomal protein L1p/L10e family
KY997_01010	PF00466	Ribosomal protein L10
KY997_01015	PF00542	Ribosomal protein L7/L12 C-terminal domain
KY997_01015	PF16320	Ribosomal protein L7/L12 dimerisation domain
KY997_01020	PF05175	Methyltransferase small domain
KY997_01035	PF01248	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
KY997_01040	PF00164	Ribosomal protein S12/S23
KY997_01045	PF00177	Ribosomal protein S7p/S5e
KY997_01050	PF00679	Elongation factor G C-terminus
KY997_01050	PF14492	Elongation Factor G, domain II
KY997_01050	PF03764	Elongation factor G, domain IV
KY997_01050	PF00009	Elongation factor Tu GTP binding domain
KY997_01050	PF03144	Elongation factor Tu domain 2
KY997_01055	PF03143	Elongation factor Tu C-terminal domain
KY997_01055	PF00009	Elongation factor Tu GTP binding domain
KY997_01055	PF03144	Elongation factor Tu domain 2
KY997_01065	PF00297	Ribosomal protein L3
KY997_01070	PF00573	Ribosomal protein L4/L1 family
KY997_01075	PF00276	Ribosomal protein L23
KY997_01080	PF03947	Ribosomal Proteins L2, C-terminal domain
KY997_01080	PF00181	Ribosomal Proteins L2, RNA binding domain
KY997_01085	PF00203	Ribosomal protein S19
KY997_01090	PF00237	Ribosomal protein L22p/L17e
KY997_01095	PF00189	Ribosomal protein S3, C-terminal domain
KY997_01095	PF07650	KH domain
KY997_01100	PF00252	Ribosomal protein L16p/L10e
KY997_01105	PF00831	Ribosomal L29 protein
KY997_01110	PF00366	Ribosomal protein S17
KY997_01115	PF00238	Ribosomal protein L14p/L23e
KY997_01120	PF00467	KOW motif
KY997_01120	PF17136	Ribosomal proteins 50S L24/mitochondrial 39S L24
KY997_01125	PF00281	Ribosomal protein L5
KY997_01125	PF00673	ribosomal L5P family C-terminus
KY997_01130	PF00253	Ribosomal protein S14p/S29e
KY997_01135	PF00410	Ribosomal protein S8
KY997_01140	PF00347	Ribosomal protein L6
KY997_01145	PF00861	Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
KY997_01150	PF00333	Ribosomal protein S5, N-terminal domain
KY997_01150	PF03719	Ribosomal protein S5, C-terminal domain
KY997_01155	PF00327	Ribosomal protein L30p/L7e
KY997_01160	PF00828	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
KY997_01170	PF05191	Adenylate kinase, active site lid
KY997_01175	PF00557	Metallopeptidase family M24
KY997_01185	PF01176	Translation initiation factor 1A / IF-1
KY997_01190	PF00444	Ribosomal protein L36
KY997_01195	PF00416	Ribosomal protein S13/S18
KY997_01200	PF00411	Ribosomal protein S11
KY997_01205	PF01000	RNA polymerase Rpb3/RpoA insert domain
KY997_01205	PF03118	Bacterial RNA polymerase, alpha chain C terminal domain
KY997_01205	PF01193	RNA polymerase Rpb3/Rpb11 dimerisation domain
KY997_01210	PF01196	Ribosomal protein L17
KY997_01215	PF00005	ABC transporter
KY997_01220	PF00005	ABC transporter
KY997_01225	PF02361	Cobalt transport protein
KY997_01230	PF01416	tRNA pseudouridine synthase
KY997_01235	PF00572	Ribosomal protein L13
KY997_01240	PF00380	Ribosomal protein S9/S16
KY997_01265	PF05163	DinB family
KY997_01270	PF00082	Subtilase family
KY997_01285	PF00005	ABC transporter
KY997_01305	PF00005	ABC transporter
KY997_01370	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_01370	PF00989	PAS fold
KY997_01370	PF17203	Single cache domain 3
KY997_01370	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
KY997_01390	PF10730	Protein of unknown function (DUF2521)
KY997_01395	PF01520	N-acetylmuramoyl-L-alanine amidase
KY997_01400	PF10609	NUBPL iron-transfer P-loop NTPase
KY997_01405	PF17898	Spore germination GerD central core domain
KY997_01410	PF14089	KinB-signalling pathway activation in sporulation
KY997_01455	PF01758	Sodium Bile acid symporter family
KY997_01460	PF17369	Family of unknown function (DUF5391)
KY997_01465	PF02567	Phenazine biosynthesis-like protein
KY997_01470	PF07075	Protein of unknown function (DUF1343)
KY997_01475	PF00933	Glycosyl hydrolase family 3 N terminal domain
KY997_01475	PF01915	Glycosyl hydrolase family 3 C-terminal domain
KY997_01485	PF00367	phosphotransferase system, EIIB
KY997_01485	PF02378	Phosphotransferase system, EIIC 
KY997_01490	PF01418	Helix-turn-helix domain, rpiR family
KY997_01490	PF01380	SIS domain
KY997_01495	PF01380	SIS domain
KY997_01530	PF00491	Arginase family
KY997_01540	PF13490	Putative zinc-finger
KY997_01550	PF07949	YbbR-like protein
KY997_01555	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
KY997_01555	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
KY997_01555	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
KY997_01555	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
KY997_01560	PF01380	SIS domain
KY997_01575	PF00005	ABC transporter
KY997_01580	PF00392	Bacterial regulatory proteins, gntR family
KY997_01590	PF00376	MerR family regulatory protein
KY997_01590	PF09278	MerR, DNA binding
KY997_01615	PF00664	ABC transporter transmembrane region
KY997_01615	PF00005	ABC transporter
KY997_01640	PF04439	Streptomycin adenylyltransferase
KY997_01660	PF03466	LysR substrate binding domain
KY997_01660	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_01670	PF07690	Major Facilitator Superfamily
KY997_01675	PF17334	Minor curli fiber component A
KY997_01680	PF17340	Family of unknown function (DUF5370)
KY997_01695	PF03190	Protein of unknown function, DUF255
KY997_01700	PF08241	Methyltransferase domain
KY997_01715	PF07729	FCD domain
KY997_01715	PF00392	Bacterial regulatory proteins, gntR family
KY997_01720	PF01925	Sulfite exporter TauE/SafE
KY997_01740	PF02690	Na+/Pi-cotransporter
KY997_01755	PF08924	Domain of unknown function (DUF1906)
KY997_01755	PF01471	Putative peptidoglycan binding domain
KY997_01765	PF00892	EamA-like transporter family
KY997_01780	PF00196	Bacterial regulatory proteins, luxR family
KY997_01780	PF03472	Autoinducer binding domain
KY997_01800	PF00465	Iron-containing alcohol dehydrogenase 
KY997_01820	PF10710	Protein of unknown function (DUF2512)
KY997_01825	PF00324	Amino acid permease
KY997_01830	PF02574	Homocysteine S-methyltransferase
KY997_01845	PF07739	TipAS antibiotic-recognition domain
KY997_01845	PF13411	MerR HTH family regulatory protein
KY997_01855	PF00101	Ribulose bisphosphate carboxylase, small chain
KY997_01855	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_01860	PF10990	Protein of unknown function (DUF2809)
KY997_01865	PF01235	Sodium:alanine symporter family
KY997_01870	PF04960	Glutaminase
KY997_01880	PF08664	YcbB domain
KY997_01880	PF00072	Response regulator receiver domain
KY997_01885	PF13302	Acetyltransferase (GNAT) domain
KY997_01895	PF03965	Penicillinase repressor
KY997_01905	PF09423	PhoD-like phosphatase
KY997_01905	PF16655	PhoD-like phosphatase, N-terminal domain
KY997_01910	PF02416	mttA/Hcf106 family
KY997_01915	PF00902	Sec-independent protein translocase protein (TatC)
KY997_01920	PF00701	Dihydrodipicolinate synthetase family
KY997_01925	PF00171	Aldehyde dehydrogenase family
KY997_01930	PF07690	Major Facilitator Superfamily
KY997_01940	PF00392	Bacterial regulatory proteins, gntR family
KY997_01940	PF07729	FCD domain
KY997_01965	PF00072	Response regulator receiver domain
KY997_01965	PF00486	Transcriptional regulatory protein, C terminal
KY997_01970	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_01970	PF00512	His Kinase A (phospho-acceptor) domain
KY997_01975	PF00005	ABC transporter
KY997_01995	PF16226	Domain of unknown function (DUF4885)
KY997_02005	PF01047	MarR family
KY997_02010	PF00501	AMP-binding enzyme
KY997_02010	PF13193	AMP-binding enzyme C-terminal domain
KY997_02030	PF13411	MerR HTH family regulatory protein
KY997_02030	PF07739	TipAS antibiotic-recognition domain
KY997_02040	PF13847	Methyltransferase domain
KY997_02040	PF03551	Transcriptional regulator PadR-like family
KY997_02050	PF15777	Tryptophan RNA-binding attenuator protein inhibitory protein
KY997_02055	PF00892	EamA-like transporter family
KY997_02070	PF00005	ABC transporter
KY997_02085	PF00072	Response regulator receiver domain
KY997_02085	PF00486	Transcriptional regulatory protein, C terminal
KY997_02090	PF00512	His Kinase A (phospho-acceptor) domain
KY997_02090	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_02100	PF14552	Tautomerase enzyme
KY997_02115	PF17118	Domain of unknown function (DUF5105)
KY997_02115	PF11611	Domain of unknown function (DUF4352)
KY997_02135	PF00583	Acetyltransferase (GNAT) family
KY997_02145	PF01432	Peptidase family M3
KY997_02145	PF08439	Oligopeptidase F
KY997_02150	PF04226	Transglycosylase associated protein
KY997_02170	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_02175	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
KY997_02180	PF02378	Phosphotransferase system, EIIC 
KY997_02185	PF02056	Family 4 glycosyl hydrolase
KY997_02185	PF11975	Family 4 glycosyl hydrolase C-terminal domain
KY997_02190	PF00392	Bacterial regulatory proteins, gntR family
KY997_02190	PF07702	UTRA domain
KY997_02195	PF04794	YdjC-like protein
KY997_02200	PF00704	Glycosyl hydrolases family 18
KY997_02200	PF00041	Fibronectin type III domain
KY997_02205	PF00704	Glycosyl hydrolases family 18
KY997_02205	PF06483	Chitinase C
KY997_02210	PF00089	Trypsin
KY997_02235	PF07486	Cell Wall Hydrolase
KY997_02245	PF00877	NlpC/P60 family
KY997_02255	PF00005	ABC transporter
KY997_02255	PF13732	Domain of unknown function (DUF4162)
KY997_02260	PF17932	Tetracyclin repressor-like, C-terminal domain
KY997_02260	PF00440	Bacterial regulatory proteins, tetR family
KY997_02280	PF02342	TerD domain
KY997_02285	PF02342	TerD domain
KY997_02290	PF02342	TerD domain
KY997_02295	PF03741	Integral membrane protein TerC family
KY997_02310	PF14266	Putative component of 'biosynthetic module'
KY997_02315	PF05816	Toxic anion resistance protein (TelA)
KY997_02320	PF02683	Cytochrome C biogenesis protein transmembrane region
KY997_02340	PF02652	L-lactate permease
KY997_02345	PF01810	LysE type translocator
KY997_02355	PF02540	NAD synthase
KY997_02365	PF10127	RNA repair pathway DNA polymerase beta family
KY997_02375	PF00171	Aldehyde dehydrogenase family
KY997_02385	PF17853	GGDEF-like domain
KY997_02385	PF13556	PucR C-terminal helix-turn-helix domain
KY997_02390	PF09323	Domain of unknown function (DUF1980)
KY997_02425	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_02430	PF00497	Bacterial extracellular solute-binding proteins, family 3
KY997_02440	PF00005	ABC transporter
KY997_02445	PF00232	Glycosyl hydrolase family 1
KY997_02450	PF11033	Competence protein J (ComJ)
KY997_02455	PF14040	Deoxyribonuclease NucA/NucB
KY997_02465	PF00069	Protein kinase domain
KY997_02465	PF03793	PASTA domain
KY997_02470	PF14410	HNH/ENDO VII superfamily nuclease with conserved GHE residues
KY997_02470	PF04740	LXG domain of WXG superfamily
KY997_02470	PF14449	Pre-toxin TG
KY997_02490	PF08402	TOBE domain
KY997_02490	PF00005	ABC transporter
KY997_02520	PF00975	Thioesterase domain
KY997_02525	PF00892	EamA-like transporter family
KY997_02530	PF00392	Bacterial regulatory proteins, gntR family
KY997_02530	PF00155	Aminotransferase class I and II
KY997_02540	PF00756	Putative esterase
KY997_02545	PF12833	Helix-turn-helix domain
KY997_02545	PF06445	GyrI-like small molecule binding domain
KY997_02565	PF00672	HAMP domain
KY997_02565	PF02743	Cache domain
KY997_02565	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_02575	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_02580	PF00497	Bacterial extracellular solute-binding proteins, family 3
KY997_02585	PF02954	Bacterial regulatory protein, Fis family
KY997_02585	PF13426	PAS domain
KY997_02585	PF00158	Sigma-54 interaction domain
KY997_02590	PF00202	Aminotransferase class-III
KY997_02600	PF00491	Arginase family
KY997_02605	PF03466	LysR substrate binding domain
KY997_02605	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_02610	PF02441	Flavoprotein
KY997_02615	PF01977	3-octaprenyl-4-hydroxybenzoate carboxy-lyase
KY997_02705	PF02653	Branched-chain amino acid transport system / permease component
KY997_02710	PF07690	Major Facilitator Superfamily
KY997_02715	PF00583	Acetyltransferase (GNAT) family
KY997_02715	PF01047	MarR family
KY997_02730	PF02333	Phytase
KY997_02740	PF00854	POT family
KY997_02745	PF12708	Pectate lyase superfamily protein
KY997_02745	PF13229	Right handed beta helix region
KY997_02760	PF03323	Bacillus/Clostridium GerA spore germination protein
KY997_02765	PF05504	Spore germination B3/ GerAC like, C-terminal 
KY997_02770	PF03845	Spore germination protein
KY997_02775	PF13411	MerR HTH family regulatory protein
KY997_02775	PF07739	TipAS antibiotic-recognition domain
KY997_02780	PF00005	ABC transporter
KY997_02785	PF02687	FtsX-like permease family
KY997_02785	PF12704	MacB-like periplasmic core domain
KY997_02790	PF00486	Transcriptional regulatory protein, C terminal
KY997_02790	PF00072	Response regulator receiver domain
KY997_02800	PF12729	Four helix bundle sensory module for signal transduction
KY997_02800	PF00672	HAMP domain
KY997_02800	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_02805	PF13840	ACT domain 
KY997_02805	PF00696	Amino acid kinase family
KY997_02815	PF01032	FecCD transport family
KY997_02825	PF01497	Periplasmic binding protein
KY997_02830	PF07690	Major Facilitator Superfamily
KY997_02835	PF00440	Bacterial regulatory proteins, tetR family
KY997_02845	PF00881	Nitroreductase family
KY997_02850	PF03992	Antibiotic biosynthesis monooxygenase
KY997_02855	PF01022	Bacterial regulatory protein, arsR family
KY997_02865	PF00202	Aminotransferase class-III
KY997_02875	PF00171	Aldehyde dehydrogenase family
KY997_02890	PF07987	Domain of unkown function (DUF1775)
KY997_02895	PF04234	CopC domain
KY997_02895	PF05425	Copper resistance protein D
KY997_02895	PF13115	YtkA-like
KY997_02915	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_02915	PF04324	BFD-like [2Fe-2S] binding domain
KY997_02915	PF18267	Rubredoxin NAD+ reductase C-terminal domain
KY997_02915	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
KY997_02915	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
KY997_02920	PF00355	Rieske [2Fe-2S] domain
KY997_02925	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
KY997_02930	PF00392	Bacterial regulatory proteins, gntR family
KY997_02930	PF07729	FCD domain
KY997_02950	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_02970	PF02779	Transketolase, pyrimidine binding domain
KY997_02970	PF02780	Transketolase, C-terminal domain
KY997_02980	PF03746	LamB/YcsF family
KY997_02995	PF02682	Carboxyltransferase domain, subdomain C and D
KY997_03005	PF01614	Bacterial transcriptional regulator
KY997_03005	PF09339	IclR helix-turn-helix domain
KY997_03010	PF13472	GDSL-like Lipase/Acylhydrolase family
KY997_03020	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_03025	PF08125	Mannitol dehydrogenase C-terminal domain
KY997_03025	PF01232	Mannitol dehydrogenase Rossmann domain
KY997_03050	PF16242	Pyridoxamine 5'-phosphate oxidase like
KY997_03055	PF10997	Alternate to MurJ
KY997_03060	PF03816	Cell envelope-related transcriptional attenuator domain
KY997_03065	PF12823	Domain of unknown function (DUF3817)
KY997_03075	PF01037	Lrp/AsnC ligand binding domain
KY997_03085	PF02153	Prephenate dehydrogenase
KY997_03090	PF00117	Glutamine amidotransferase class-I
KY997_03090	PF04715	Anthranilate synthase component I, N terminal region
KY997_03090	PF00425	chorismate binding enzyme
KY997_03095	PF01817	Chorismate mutase type II
KY997_03115	PF13302	Acetyltransferase (GNAT) domain
KY997_03120	PF01566	Natural resistance-associated macrophage protein
KY997_03125	PF04226	Transglycosylase associated protein
KY997_03135	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
KY997_03140	PF09954	Uncharacterized protein conserved in bacteria (DUF2188)
KY997_03155	PF07883	Cupin domain
KY997_03165	PF01594	AI-2E family transporter
KY997_03175	PF00005	ABC transporter
KY997_03195	PF13040	Fur-regulated basic protein B
KY997_03205	PF00085	Thioredoxin
KY997_03210	PF07478	D-ala D-ala ligase C-terminus
KY997_03210	PF01820	D-ala D-ala ligase N-terminus
KY997_03215	PF02875	Mur ligase family, glutamate ligase domain
KY997_03215	PF08245	Mur ligase middle domain
KY997_03215	PF01225	Mur ligase family, catalytic domain
KY997_03220	PF12146	Serine aminopeptidase, S33
KY997_03230	PF03703	Bacterial PH domain
KY997_03250	PF01168	Alanine racemase, N-terminal domain
KY997_03250	PF00842	Alanine racemase, C-terminal domain
KY997_03255	PF01402	Ribbon-helix-helix protein, copG family
KY997_03260	PF02452	PemK-like, MazF-like toxin of type II toxin-antitoxin system
KY997_03265	PF01740	STAS domain
KY997_03265	PF08678	Rsbr N terminal
KY997_03270	PF01740	STAS domain
KY997_03280	PF07228	Stage II sporulation protein E (SpoIIE)
KY997_03280	PF08673	Phosphoserine phosphatase RsbU, N-terminal domain
KY997_03285	PF01740	STAS domain
KY997_03290	PF13581	Histidine kinase-like ATPase domain
KY997_03295	PF04539	Sigma-70 region 3
KY997_03295	PF04545	Sigma-70, region 4
KY997_03295	PF04542	Sigma-70 region 2 
KY997_03300	PF07228	Stage II sporulation protein E (SpoIIE)
KY997_03305	PF17674	HHH domain
KY997_03305	PF00575	S1 RNA binding domain
KY997_03305	PF09371	Tex-like protein N-terminal domain
KY997_03305	PF16921	Tex protein YqgF-like domain
KY997_03330	PF10263	SprT-like family
KY997_03370	PF14659	Phage integrase, N-terminal SAM-like domain
KY997_03370	PF00589	Phage integrase family
KY997_03400	PF00457	Glycosyl hydrolases family 11
KY997_03405	PF00487	Fatty acid desaturase
KY997_03410	PF00313	'Cold-shock' DNA-binding domain
KY997_03440	PF01047	MarR family
KY997_03450	PF04299	Putative FMN-binding domain
KY997_03460	PF01638	HxlR-like helix-turn-helix
KY997_03465	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_03465	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_03495	PF01638	HxlR-like helix-turn-helix
KY997_03505	PF04199	Putative cyclase
KY997_03510	PF00324	Amino acid permease
KY997_03520	PF08859	DGC domain
KY997_03525	PF00561	alpha/beta hydrolase fold
KY997_03535	PF08281	Sigma-70, region 4
KY997_03535	PF04542	Sigma-70 region 2 
KY997_03540	PF13739	Deacetylase PdaC
KY997_03540	PF11738	Protein of unknown function (DUF3298)
KY997_03545	PF01757	Acyltransferase family
KY997_03550	PF00293	NUDIX domain
KY997_03560	PF00465	Iron-containing alcohol dehydrogenase 
KY997_03570	PF04397	LytTr DNA-binding domain
KY997_03570	PF00072	Response regulator receiver domain
KY997_03580	PF04203	Sortase domain
KY997_03585	PF00083	Sugar (and other) transporter
KY997_03630	PF02367	Threonylcarbamoyl adenosine biosynthesis protein TsaE
KY997_03635	PF00814	Glycoprotease family
KY997_03655	PF01967	MoaC family
KY997_03665	PF02416	mttA/Hcf106 family
KY997_03675	PF14146	Domain of unknown function (DUF4305)
KY997_03680	PF02517	CPBP intramembrane metalloprotease
KY997_03685	PF00166	Chaperonin 10 Kd subunit
KY997_03690	PF00118	TCP-1/cpn60 chaperonin family
KY997_03705	PF10787	Uncharacterised protein from bacillus cereus group
KY997_03720	PF02586	SOS response associated peptidase (SRAP)
KY997_03735	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
KY997_03735	PF00391	PEP-utilising enzyme, mobile domain
KY997_03750	PF00106	short chain dehydrogenase
KY997_03760	PF07690	Major Facilitator Superfamily
KY997_03765	PF04012	PspA/IM30 family
KY997_03775	PF04536	TPM domain
KY997_03790	PF01978	Sugar-specific transcriptional regulator TrmB
KY997_03790	PF11495	Archaeal transcriptional regulator TrmB
KY997_03795	PF01810	LysE type translocator
KY997_03800	PF06803	Protein of unknown function (DUF1232)
KY997_03805	PF01098	Cell cycle protein
KY997_03840	PF00128	Alpha amylase, catalytic domain
KY997_03840	PF09154	Domain of unknown function (DUF1939)
KY997_03855	PF00128	Alpha amylase, catalytic domain
KY997_03855	PF02903	Alpha amylase, N-terminal ig-like domain
KY997_03860	PF13416	Bacterial extracellular solute-binding protein
KY997_03865	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_03875	PF06691	Protein of unknown function (DUF1189)
KY997_03885	PF00128	Alpha amylase, catalytic domain
KY997_03885	PF16657	Maltogenic Amylase, C-terminal domain
KY997_03890	PF13419	Haloacid dehalogenase-like hydrolase
KY997_03895	PF01479	S4 domain
KY997_03895	PF00579	tRNA synthetases class I (W and Y)
KY997_03900	PF01047	MarR family
KY997_03920	PF07676	WD40-like Beta Propeller Repeat
KY997_03940	PF10502	Signal peptidase, peptidase S26 
KY997_03950	PF13460	NAD(P)H-binding 
KY997_03955	PF12833	Helix-turn-helix domain
KY997_03980	PF16916	Dimerisation domain of Zinc Transporter
KY997_03980	PF01545	Cation efflux family
KY997_03985	PF07726	ATPase family associated with various cellular activities (AAA)
KY997_03985	PF17863	AAA lid domain
KY997_03990	PF01882	Protein of unknown function DUF58
KY997_03995	PF11992	Domain of unknown function (DUF3488)
KY997_03995	PF13559	Domain of unknown function (DUF4129)
KY997_03995	PF01841	Transglutaminase-like superfamily
KY997_04000	PF00958	GMP synthase C terminal domain
KY997_04000	PF00117	Glutamine amidotransferase class-I
KY997_04000	PF02540	NAD synthase
KY997_04010	PF00860	Permease family
KY997_04020	PF13076	Fur-regulated basic protein A
KY997_04025	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_04030	PF14044	NETI protein
KY997_04040	PF02222	ATP-grasp domain
KY997_04040	PF17769	Phosphoribosylaminoimidazole carboxylase C-terminal domain
KY997_04045	PF10397	Adenylosuccinate lyase C-terminus
KY997_04045	PF00206	Lyase
KY997_04055	PF02700	Phosphoribosylformylglycinamidine (FGAM) synthase
KY997_04070	PF00156	Phosphoribosyl transferase domain
KY997_04075	PF02769	AIR synthase related protein, C-terminal domain
KY997_04075	PF00586	AIR synthase related protein, N-terminal domain
KY997_04080	PF00551	Formyl transferase
KY997_04085	PF01808	AICARFT/IMPCHase bienzyme
KY997_04085	PF02142	MGS-like domain
KY997_04090	PF02843	Phosphoribosylglycinamide synthetase, C domain
KY997_04090	PF02844	Phosphoribosylglycinamide synthetase, N domain
KY997_04090	PF01071	Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
KY997_04120	PF11127	Protein of unknown function (DUF2892)
KY997_04125	PF01979	Amidohydrolase family
KY997_04125	PF13382	Adenine deaminase C-terminal domain
KY997_04130	PF11258	Protein of unknown function (DUF3048) N-terminal domain
KY997_04130	PF17479	Protein of unknown function (DUF3048) C-terminal domain
KY997_04135	PF01371	Trp repressor protein
KY997_04140	PF01884	PcrB family
KY997_04145	PF13361	UvrD-like helicase C-terminal domain
KY997_04145	PF00580	UvrD/REP helicase N-terminal domain
KY997_04155	PF07537	CamS sex pheromone cAM373 precursor
KY997_04170	PF10941	Protein of unknown function DUF2620
KY997_04175	PF10797	Protein of unknown function
KY997_04180	PF02126	Phosphotriesterase family
KY997_04190	PF01676	Metalloenzyme superfamily
KY997_04195	PF01168	Alanine racemase, N-terminal domain
KY997_04200	PF01182	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
KY997_04205	PF02308	MgtC family
KY997_04210	PF00474	Sodium:solute symporter family
KY997_04215	PF02686	Glu-tRNAGln amidotransferase C subunit
KY997_04220	PF01425	Amidase
KY997_04225	PF02637	GatB domain
KY997_04225	PF02934	GatB/GatE catalytic domain
KY997_04240	PF02156	Glycosyl hydrolase family 26
KY997_04245	PF00440	Bacterial regulatory proteins, tetR family
KY997_04260	PF13302	Acetyltransferase (GNAT) domain
KY997_04265	PF01156	Inosine-uridine preferring nucleoside hydrolase
KY997_04275	PF01938	TRAM domain
KY997_04275	PF05958	tRNA (Uracil-5-)-methyltransferase
KY997_04300	PF00145	C-5 cytosine-specific DNA methylase
KY997_04310	PF03123	CAT RNA binding domain
KY997_04310	PF00874	PRD domain
KY997_04315	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_04340	PF00892	EamA-like transporter family
KY997_04345	PF00392	Bacterial regulatory proteins, gntR family
KY997_04345	PF00155	Aminotransferase class I and II
KY997_04355	PF01709	Transcriptional regulator
KY997_04360	PF01381	Helix-turn-helix
KY997_04390	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_04395	PF01040	UbiA prenyltransferase family
KY997_04400	PF00440	Bacterial regulatory proteins, tetR family
KY997_04410	PF00005	ABC transporter
KY997_04410	PF16326	ABC transporter C-terminal domain
KY997_04410	PF12848	ABC transporter
KY997_04420	PF01965	DJ-1/PfpI family
KY997_04425	PF01022	Bacterial regulatory protein, arsR family
KY997_04430	PF02649	Type I GTP cyclohydrolase folE2
KY997_04445	PF02492	CobW/HypB/UreG, nucleotide-binding domain
KY997_04445	PF07683	Cobalamin synthesis protein cobW C-terminal domain
KY997_04455	PF00202	Aminotransferase class-III
KY997_04460	PF00155	Aminotransferase class I and II
KY997_04475	PF00067	Cytochrome P450
KY997_04485	PF13411	MerR HTH family regulatory protein
KY997_04490	PF07690	Major Facilitator Superfamily
KY997_04510	PF11486	Protein of unknown function (DUF3212)
KY997_04515	PF11181	Heat induced stress protein YflT
KY997_04520	PF00939	Sodium:sulfate symporter transmembrane region
KY997_04530	PF00005	ABC transporter
KY997_04560	PF02898	Nitric oxide synthase, oxygenase domain
KY997_04565	PF00704	Glycosyl hydrolases family 18
KY997_04570	PF13630	SdpI/YhfL protein family
KY997_04570	PF07853	Protein of unknown function (DUF1648)
KY997_04575	PF01022	Bacterial regulatory protein, arsR family
KY997_04580	PF00708	Acylphosphatase
KY997_04585	PF03473	MOSC domain
KY997_04585	PF03475	3-alpha domain
KY997_04590	PF11121	Protein of unknown function (DUF2639)
KY997_04600	PF00557	Metallopeptidase family M24
KY997_04610	PF09350	Domain of unknown function (DUF1992)
KY997_04620	PF02378	Phosphotransferase system, EIIC 
KY997_04620	PF00367	phosphotransferase system, EIIB
KY997_04630	PF00392	Bacterial regulatory proteins, gntR family
KY997_04630	PF07702	UTRA domain
KY997_04635	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_04655	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
KY997_04660	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_04680	PF00535	Glycosyl transferase family 2
KY997_04680	PF13181	Tetratricopeptide repeat
KY997_04690	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_04690	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_04695	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
KY997_04695	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
KY997_04695	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
KY997_04705	PF01638	HxlR-like helix-turn-helix
KY997_04710	PF00881	Nitroreductase family
KY997_04720	PF01965	DJ-1/PfpI family
KY997_04725	PF06569	Protein of unknown function (DUF1128)
KY997_04730	PF01235	Sodium:alanine symporter family
KY997_04735	PF01451	Low molecular weight phosphotyrosine protein phosphatase
KY997_04745	PF03631	Virulence factor BrkB
KY997_04760	PF01699	Sodium/calcium exchanger protein
KY997_04765	PF14167	YfkD-like protein
KY997_04785	PF00465	Iron-containing alcohol dehydrogenase 
KY997_04795	PF01544	CorA-like Mg2+ transporter protein
KY997_04830	PF00201	UDP-glucoronosyl and UDP-glucosyl transferase
KY997_04835	PF10925	Protein of unknown function (DUF2680)
KY997_04840	PF07690	Major Facilitator Superfamily
KY997_04850	PF02378	Phosphotransferase system, EIIC 
KY997_04850	PF00367	phosphotransferase system, EIIB
KY997_04855	PF00874	PRD domain
KY997_04855	PF03123	CAT RNA binding domain
KY997_04870	PF00361	Proton-conducting membrane transporter
KY997_04870	PF00662	NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus
KY997_04875	PF10057	Uncharacterized conserved protein (DUF2294)
KY997_04890	PF02779	Transketolase, pyrimidine binding domain
KY997_04890	PF02780	Transketolase, C-terminal domain
KY997_04895	PF02817	e3 binding domain
KY997_04895	PF00364	Biotin-requiring enzyme
KY997_04895	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
KY997_04910	PF02694	Uncharacterised BCR, YnfA/UPF0060 family
KY997_04915	PF02056	Family 4 glycosyl hydrolase
KY997_04915	PF11975	Family 4 glycosyl hydrolase C-terminal domain
KY997_04920	PF01418	Helix-turn-helix domain, rpiR family
KY997_04920	PF01380	SIS domain
KY997_04925	PF02378	Phosphotransferase system, EIIC 
KY997_04925	PF00367	phosphotransferase system, EIIB
KY997_04940	PF01638	HxlR-like helix-turn-helix
KY997_04945	PF07681	DoxX
KY997_04950	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_04960	PF17851	Beta xylosidase C-terminal Concanavalin A-like domain 
KY997_04960	PF04616	Glycosyl hydrolases family 43
KY997_04970	PF13416	Bacterial extracellular solute-binding protein
KY997_04975	PF02525	Flavodoxin-like fold
KY997_04980	PF00293	NUDIX domain
KY997_04985	PF12867	DinB superfamily
KY997_04990	PF12867	DinB superfamily
KY997_05000	PF02567	Phenazine biosynthesis-like protein
KY997_05005	PF00881	Nitroreductase family
KY997_05010	PF14151	YfhD-like protein
KY997_05025	PF01370	NAD dependent epimerase/dehydratase family
KY997_05025	PF08338	Domain of unknown function (DUF1731)
KY997_05030	PF02631	RecX family
KY997_05035	PF08838	Protein of unknown function (DUF1811)
KY997_05045	PF08176	Small acid-soluble spore protein K family
KY997_05050	PF14043	WVELL protein
KY997_05055	PF00535	Glycosyl transferase family 2
KY997_05065	PF09586	Bacterial membrane protein YfhO
KY997_05075	PF00730	HhH-GPD superfamily base excision DNA repair protein
KY997_05075	PF14815	NUDIX domain
KY997_05095	PF14182	YgaB-like protein
KY997_05100	PF04167	Protein of unknown function (DUF402)
KY997_05105	PF00664	ABC transporter transmembrane region
KY997_05105	PF00005	ABC transporter
KY997_05110	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_05110	PF00005	ABC transporter
KY997_05115	PF00005	ABC transporter
KY997_05115	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_05120	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_05135	PF06081	Aromatic acid exporter family member 1
KY997_05140	PF00202	Aminotransferase class-III
KY997_05145	PF00578	AhpC/TSA family
KY997_05150	PF01475	Ferric uptake regulator family
KY997_05160	PF14540	Nucleotidyltransferase-like
KY997_05160	PF18576	Helix-turn-helix domain
KY997_05255	PF02899	Phage integrase, N-terminal SAM-like domain
KY997_05255	PF00589	Phage integrase family
KY997_05390	PF01367	5'-3' exonuclease, C-terminal SAM fold
KY997_05390	PF00476	DNA polymerase family A
KY997_05390	PF01612	3'-5' exonuclease
KY997_05390	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
KY997_05410	PF02075	Crossover junction endodeoxyribonuclease RuvC
KY997_05430	PF07972	NrdI Flavodoxin like 
KY997_05435	PF02867	Ribonucleotide reductase, barrel domain
KY997_05435	PF00317	Ribonucleotide reductase, all-alpha domain
KY997_05435	PF08343	Ribonucleotide reductase N-terminal
KY997_05450	PF00268	Ribonucleotide reductase, small chain
KY997_05465	PF06725	3D domain
KY997_05485	PF00145	C-5 cytosine-specific DNA methylase
KY997_05515	PF01068	ATP dependent DNA ligase domain
KY997_05730	PF08863	YolD-like protein
KY997_05805	PF17356	Phage-like element PBSX protein XtrA
KY997_05840	PF00589	Phage integrase family
KY997_05850	PF11122	Inner spore coat protein D
KY997_05870	PF03354	Phage Terminase 
KY997_05885	PF00574	Clp protease
KY997_05930	PF01464	Transglycosylase SLT domain
KY997_05940	PF13457	GW (Gly-Tryp) dipeptide domain
KY997_05940	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
KY997_05945	PF11962	Peptidase_G2, IMC autoproteolytic cleavage domain
KY997_05945	PF12708	Pectate lyase superfamily protein
KY997_05965	PF10779	Haemolysin XhlA
KY997_05970	PF04688	SPP1 phage holin
KY997_06010	PF08863	YolD-like protein
KY997_06020	PF00717	Peptidase S24-like
KY997_06020	PF01726	LexA DNA binding domain
KY997_06060	PF00005	ABC transporter
KY997_06065	PF09084	NMT1/THI5 like
KY997_06070	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_06075	PF00296	Luciferase-like monooxygenase
KY997_06085	PF01381	Helix-turn-helix
KY997_06115	PF00253	Ribosomal protein S14p/S29e
KY997_06130	PF08331	Domain of unknown function (DUF1730)
KY997_06135	PF12671	Putative amidase domain
KY997_06140	PF00588	SpoU rRNA Methylase family
KY997_06150	PF04519	Polymer-forming cytoskeletal
KY997_06165	PF04285	Protein of unknown function (DUF444)
KY997_06175	PF07690	Major Facilitator Superfamily
KY997_06180	PF03358	NADPH-dependent FMN reductase
KY997_06195	PF00392	Bacterial regulatory proteins, gntR family
KY997_06205	PF00005	ABC transporter
KY997_06215	PF00313	'Cold-shock' DNA-binding domain
KY997_06225	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_06235	PF00375	Sodium:dicarboxylate symporter family
KY997_06250	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
KY997_06260	PF07875	Coat F domain
KY997_06265	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_06265	PF00512	His Kinase A (phospho-acceptor) domain
KY997_06265	PF00989	PAS fold
KY997_06265	PF13188	PAS domain
KY997_06265	PF13426	PAS domain
KY997_06275	PF04203	Sortase domain
KY997_06295	PF17326	Family of unknown function (DUF5365)
KY997_06300	PF00571	CBS domain
KY997_06320	PF01226	Formate/nitrite transporter
KY997_06335	PF08240	Alcohol dehydrogenase GroES-like domain
KY997_06335	PF00107	Zinc-binding dehydrogenase
KY997_06345	PF00230	Major intrinsic protein
KY997_06350	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
KY997_06350	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
KY997_06355	PF01266	FAD dependent oxidoreductase
KY997_06355	PF16901	C-terminal domain of alpha-glycerophosphate oxidase
KY997_06360	PF02878	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
KY997_06360	PF02879	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
KY997_06360	PF02880	Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
KY997_06360	PF00408	Phosphoglucomutase/phosphomannomutase, C-terminal domain
KY997_06375	PF07730	Histidine kinase
KY997_06375	PF13185	GAF domain
KY997_06390	PF14148	YhdB-like protein
KY997_06395	PF13028	Protein of unknown function (DUF3889)
KY997_06400	PF02082	Transcriptional regulator
KY997_06405	PF00175	Oxidoreductase NAD-binding domain 
KY997_06405	PF00042	Globin
KY997_06405	PF00970	Oxidoreductase FAD-binding domain
KY997_06415	PF00877	NlpC/P60 family
KY997_06415	PF01476	LysM domain
KY997_06420	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_06420	PF03466	LysR substrate binding domain
KY997_06480	PF17453	Sigma-M inhibitor
KY997_06485	PF13791	Sigma factor regulator C-terminal
KY997_06485	PF13800	Sigma factor regulator N-terminal
KY997_06490	PF04542	Sigma-70 region 2 
KY997_06490	PF08281	Sigma-70, region 4
KY997_06495	PF07883	Cupin domain
KY997_06500	PF00248	Aldo/keto reductase family
KY997_06505	PF01553	Acyltransferase
KY997_06510	PF05656	Protein of unknown function (DUF805)
KY997_06530	PF13411	MerR HTH family regulatory protein
KY997_06535	PF00571	CBS domain
KY997_06535	PF03471	Transporter associated domain
KY997_06535	PF01595	Cyclin M transmembrane N-terminal domain
KY997_06550	PF01520	N-acetylmuramoyl-L-alanine amidase
KY997_06550	PF05036	Sporulation related domain
KY997_06555	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
KY997_06560	PF02537	CrcB-like protein, Camphor Resistance (CrcB)
KY997_06565	PF03009	Glycerophosphoryl diester phosphodiesterase family
KY997_06570	PF17444	Uncharacterized YhdX-like
KY997_06575	PF00924	Mechanosensitive ion channel
KY997_06605	PF03553	Na+/H+ antiporter family
KY997_06610	PF01263	Aldose 1-epimerase
KY997_06615	PF16302	Domain of unknown function (DUF4944)
KY997_06635	PF00582	Universal stress protein family
KY997_06650	PF13460	NAD(P)H-binding 
KY997_06660	PF00269	Small, acid-soluble spore proteins, alpha/beta type
KY997_06675	PF13556	PucR C-terminal helix-turn-helix domain
KY997_06680	PF17277	Family of unknown function (DUF5342)
KY997_06685	PF14398	YheC/D like ATP-grasp
KY997_06690	PF14398	YheC/D like ATP-grasp
KY997_06700	PF06133	Control of competence regulator ComK, YlbF/YmcA
KY997_06710	PF04055	Radical SAM superfamily
KY997_06715	PF00378	Enoyl-CoA hydratase/isomerase
KY997_06720	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_06740	PF13732	Domain of unknown function (DUF4162)
KY997_06740	PF00005	ABC transporter
KY997_06760	PF01966	HD domain
KY997_06765	PF14147	Sporulation protein YhaL
KY997_06775	PF09680	Family of unknown function
KY997_06790	PF11667	Putative zincin peptidase
KY997_06795	PF08963	Protein of unknown function (DUF1878)
KY997_06805	PF12732	YtxH-like protein
KY997_06825	PF01230	HIT domain
KY997_06830	PF00005	ABC transporter
KY997_06840	PF12787	EcsC protein family
KY997_06845	PF07687	Peptidase dimerisation domain
KY997_06845	PF01546	Peptidase family M20/M25/M40
KY997_06855	PF03992	Antibiotic biosynthesis monooxygenase
KY997_06865	PF01208	Uroporphyrinogen decarboxylase (URO-D)
KY997_06870	PF00762	Ferrochelatase
KY997_06875	PF01593	Flavin containing amine oxidoreductase
KY997_06890	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
KY997_06890	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
KY997_06905	PF00375	Sodium:dicarboxylate symporter family
KY997_06910	PF14149	YhfH-like protein
KY997_06915	PF12706	Beta-lactamase superfamily domain
KY997_06920	PF03099	Biotin/lipoate A/B protein ligase family
KY997_06920	PF10437	Bacterial lipoate protein ligase C-terminus
KY997_06935	PF07883	Cupin domain
KY997_06935	PF01381	Helix-turn-helix
KY997_06955	PF05922	Peptidase inhibitor I9
KY997_06955	PF00082	Subtilase family
KY997_06960	PF00892	EamA-like transporter family
KY997_06970	PF01032	FecCD transport family
KY997_06975	PF01032	FecCD transport family
KY997_06980	PF00300	Histidine phosphatase superfamily (branch 1)
KY997_06985	PF02803	Thiolase, C-terminal domain
KY997_06985	PF00108	Thiolase, N-terminal domain
KY997_06990	PF00501	AMP-binding enzyme
KY997_06990	PF13193	AMP-binding enzyme C-terminal domain
KY997_07015	PF08858	IDEAL domain
KY997_07020	PF06338	ComK protein
KY997_07030	PF09335	SNARE associated Golgi protein
KY997_07035	PF10502	Signal peptidase, peptidase S26 
KY997_07055	PF07905	Purine catabolism regulatory protein-like family
KY997_07055	PF13556	PucR C-terminal helix-turn-helix domain
KY997_07055	PF17853	GGDEF-like domain
KY997_07065	PF01546	Peptidase family M20/M25/M40
KY997_07070	PF07883	Cupin domain
KY997_07070	PF05899	Protein of unknown function (DUF861)
KY997_07090	PF06545	Protein of unknown function (DUF1116)
KY997_07095	PF11392	Protein of unknown function (DUF2877)
KY997_07105	PF07690	Major Facilitator Superfamily
KY997_07140	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_07145	PF11975	Family 4 glycosyl hydrolase C-terminal domain
KY997_07145	PF02056	Family 4 glycosyl hydrolase
KY997_07155	PF11007	Spore coat associated protein JA (CotJA)
KY997_07160	PF12652	CotJB protein
KY997_07165	PF05067	Manganese containing catalase
KY997_07175	PF07690	Major Facilitator Superfamily
KY997_07180	PF12793	Sugar transport-related sRNA regulator N-term
KY997_07180	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_07185	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_07185	PF12793	Sugar transport-related sRNA regulator N-term
KY997_07195	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_07195	PF00512	His Kinase A (phospho-acceptor) domain
KY997_07195	PF00989	PAS fold
KY997_07195	PF16736	Single Cache-like 
KY997_07200	PF00072	Response regulator receiver domain
KY997_07200	PF00486	Transcriptional regulatory protein, C terminal
KY997_07205	PF02915	Rubrerythrin
KY997_07215	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_07230	PF00149	Calcineurin-like phosphoesterase
KY997_07230	PF12320	Type 5 capsule protein repressor C-terminal domain
KY997_07235	PF00149	Calcineurin-like phosphoesterase
KY997_07235	PF12320	Type 5 capsule protein repressor C-terminal domain
KY997_07245	PF10676	Spore germination protein gerPA/gerPF
KY997_07250	PF10970	Spore germination protein GerPE 
KY997_07260	PF10737	Spore germination protein GerPC
KY997_07265	PF10803	Spore germination GerPB
KY997_07270	PF10676	Spore germination protein gerPA/gerPF
KY997_07275	PF12650	Domain of unknown function (DUF3784)
KY997_07280	PF09388	Spo0E like sporulation regulatory protein
KY997_07295	PF01557	Fumarylacetoacetate (FAA) hydrolase family
KY997_07305	PF07457	Protein of unknown function (DUF1516)
KY997_07310	PF10949	Protein of unknown function (DUF2777)
KY997_07325	PF00543	Nitrogen regulatory protein P-II
KY997_07330	PF01554	MatE
KY997_07335	PF12833	Helix-turn-helix domain
KY997_07335	PF02311	AraC-like ligand binding domain
KY997_07350	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_07350	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_07375	PF00155	Aminotransferase class I and II
KY997_07375	PF00392	Bacterial regulatory proteins, gntR family
KY997_07380	PF00202	Aminotransferase class-III
KY997_07385	PF00282	Pyridoxal-dependent decarboxylase conserved domain
KY997_07390	PF06276	Ferric iron reductase FhuF-like transporter
KY997_07390	PF04183	IucA / IucC family
KY997_07400	PF13434	L-lysine 6-monooxygenase (NADPH-requiring)
KY997_07405	PF04183	IucA / IucC family
KY997_07405	PF06276	Ferric iron reductase FhuF-like transporter
KY997_07410	PF13673	Acetyltransferase (GNAT) domain
KY997_07420	PF08279	HTH domain
KY997_07420	PF13280	WYL domain
KY997_07440	PF17783	CvfB-like winged helix domain
KY997_07440	PF13509	S1 domain
KY997_07460	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_07460	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_07465	PF12690	Intracellular proteinase inhibitor
KY997_07470	PF00478	IMP dehydrogenase / GMP reductase domain
KY997_07475	PF12758	Protein of unknown function (DUF3813)
KY997_07490	PF00326	Prolyl oligopeptidase family
KY997_07495	PF01883	Iron-sulfur cluster assembly protein
KY997_07500	PF02774	Semialdehyde dehydrogenase, dimerisation domain
KY997_07500	PF01118	Semialdehyde dehydrogenase, NAD binding domain
KY997_07505	PF01960	ArgJ family
KY997_07520	PF00988	Carbamoyl-phosphate synthase small chain, CPSase domain
KY997_07520	PF00117	Glutamine amidotransferase class-I
KY997_07530	PF00185	Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
KY997_07530	PF02729	Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
KY997_07535	PF02673	Bacitracin resistance protein BacA
KY997_07540	PF14168	YjzC-like protein
KY997_07565	PF10815	ComZ
KY997_07575	PF08541	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal  
KY997_07575	PF08545	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
KY997_07580	PF02801	Beta-ketoacyl synthase, C-terminal domain
KY997_07580	PF00109	Beta-ketoacyl synthase, N-terminal domain
KY997_07595	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_07595	PF00005	ABC transporter
KY997_07600	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_07600	PF00005	ABC transporter
KY997_07605	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_07610	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_07615	PF12911	N-terminal TM domain of oligopeptide transport permease C
KY997_07615	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_07625	PF12227	Protein of unknown function (DUF3603)
KY997_07645	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_07645	PF12911	N-terminal TM domain of oligopeptide transport permease C
KY997_07650	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_07650	PF00005	ABC transporter
KY997_07655	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_07655	PF00005	ABC transporter
KY997_07660	PF13508	Acetyltransferase (GNAT) domain
KY997_07665	PF03960	ArsC family
KY997_07670	PF03741	Integral membrane protein TerC family
KY997_07685	PF01270	Glycosyl hydrolases family 8
KY997_07705	PF01970	Tripartite tricarboxylate transporter TctA family
KY997_07710	PF12431	Transcriptional regulator 
KY997_07710	PF00072	Response regulator receiver domain
KY997_07725	PF01432	Peptidase family M3
KY997_07725	PF08439	Oligopeptidase F
KY997_07735	PF01152	Bacterial-like globin
KY997_07740	PF01464	Transglycosylase SLT domain
KY997_07755	PF04607	Region found in RelA / SpoT proteins
KY997_07760	PF01513	ATP-NAD kinase
KY997_07770	PF00149	Calcineurin-like phosphoesterase
KY997_07780	PF03070	TENA/THI-4/PQQC family
KY997_07785	PF02581	Thiamine monophosphate synthase
KY997_07795	PF02597	ThiS family
KY997_07800	PF05690	Thiazole biosynthesis protein ThiG
KY997_07805	PF00899	ThiF family
KY997_07810	PF08543	Phosphomethylpyrimidine kinase
KY997_07820	PF14153	Spore coat protein CotO
KY997_07825	PF10612	Spore coat protein Z
KY997_07830	PF10612	Spore coat protein Z
KY997_07835	PF07552	Spore Coat Protein X and V domain
KY997_07845	PF07552	Spore Coat Protein X and V domain
KY997_07850	PF07098	Protein of unknown function (DUF1360)
KY997_07865	PF14069	Stage VI sporulation protein F
KY997_07870	PF13361	UvrD-like helicase C-terminal domain
KY997_07870	PF00580	UvrD/REP helicase N-terminal domain
KY997_07880	PF09335	SNARE associated Golgi protein
KY997_07890	PF00483	Nucleotidyl transferase
KY997_07895	PF04138	GtrA-like protein
KY997_07900	PF13673	Acetyltransferase (GNAT) domain
KY997_07910	PF00756	Putative esterase
KY997_07935	PF01053	Cys/Met metabolism PLP-dependent enzyme
KY997_08030	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_08030	PF03466	LysR substrate binding domain
KY997_08040	PF03460	Nitrite/Sulfite reductase ferredoxin-like half domain
KY997_08040	PF01077	Nitrite and sulphite reductase 4Fe-4S domain
KY997_08045	PF03466	LysR substrate binding domain
KY997_08045	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_08055	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_08060	PF16800	IseA DL-endopeptidase inhibitor
KY997_08075	PF00440	Bacterial regulatory proteins, tetR family
KY997_08090	PF05908	Poly-gamma-glutamate hydrolase
KY997_08095	PF06114	IrrE N-terminal-like domain
KY997_08100	PF01381	Helix-turn-helix
KY997_08120	PF01695	IstB-like ATP binding protein
KY997_08140	PF08281	Sigma-70, region 4
KY997_08155	PF04860	Phage portal protein
KY997_08165	PF05065	Phage capsid family 
KY997_08170	PF11436	Protein of unknown function (DUF3199)
KY997_08175	PF12206	Domain of unknown function (DUF3599)
KY997_08180	PF04883	Bacteriophage HK97-gp10, putative tail-component
KY997_08200	PF09393	Phage tail tube protein
KY997_08205	PF08890	Phage XkdN-like tail assembly chaperone protein, TAC
KY997_08220	PF01476	LysM domain
KY997_08230	PF10844	Protein of unknown function (DUF2577)
KY997_08235	PF10934	Protein of unknown function (DUF2634)
KY997_08245	PF10076	Uncharacterised protein conserved in bacteria (DUF2313)
KY997_08265	PF10779	Haemolysin XhlA
KY997_08270	PF04688	SPP1 phage holin
KY997_08275	PF01510	N-acetylmuramoyl-L-alanine amidase
KY997_08275	PF01471	Putative peptidoglycan binding domain
KY997_08280	PF00392	Bacterial regulatory proteins, gntR family
KY997_08280	PF07729	FCD domain
KY997_08285	PF08240	Alcohol dehydrogenase GroES-like domain
KY997_08285	PF00107	Zinc-binding dehydrogenase
KY997_08290	PF03786	D-mannonate dehydratase (UxuA)
KY997_08295	PF00106	short chain dehydrogenase
KY997_08300	PF08240	Alcohol dehydrogenase GroES-like domain
KY997_08300	PF00107	Zinc-binding dehydrogenase
KY997_08305	PF07690	Major Facilitator Superfamily
KY997_08310	PF14185	Antitoxin SpoIISB, type II toxin-antitoxin system 
KY997_08320	PF01384	Phosphate transporter family
KY997_08335	PF04854	Protein of unknown function, DUF624
KY997_08360	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_08365	PF07470	Glycosyl Hydrolase Family 88
KY997_08375	PF13472	GDSL-like Lipase/Acylhydrolase family
KY997_08380	PF09224	Domain of unknown function (DUF1961)
KY997_08385	PF04854	Protein of unknown function, DUF624
KY997_08400	PF13472	GDSL-like Lipase/Acylhydrolase family
KY997_08415	PF00657	GDSL-like Lipase/Acylhydrolase
KY997_08430	PF01547	Bacterial extracellular solute-binding protein
KY997_08435	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_08440	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_08445	PF13520	Amino acid permease
KY997_08450	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_08460	PF03807	NADP oxidoreductase coenzyme F420-dependent
KY997_08460	PF14748	Pyrroline-5-carboxylate reductase dimerisation
KY997_08465	PF04951	D-aminopeptidase
KY997_08470	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_08475	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_08475	PF12911	N-terminal TM domain of oligopeptide transport permease C
KY997_08480	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_08480	PF00005	ABC transporter
KY997_08485	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_08490	PF02016	LD-carboxypeptidase N-terminal domain
KY997_08490	PF17676	LD-carboxypeptidase C-terminal domain
KY997_08495	PF13378	Enolase C-terminal domain-like
KY997_08495	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
KY997_08500	PF00877	NlpC/P60 family
KY997_08505	PF00005	ABC transporter
KY997_08505	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_08515	PF03061	Thioesterase superfamily
KY997_08545	PF12867	DinB superfamily
KY997_08550	PF00893	Small Multidrug Resistance protein
KY997_08555	PF00893	Small Multidrug Resistance protein
KY997_08560	PF01842	ACT domain
KY997_08560	PF00551	Formyl transferase
KY997_08570	PF00171	Aldehyde dehydrogenase family
KY997_08575	PF02566	OsmC-like protein
KY997_08580	PF01047	MarR family
KY997_08595	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
KY997_08600	PF00300	Histidine phosphatase superfamily (branch 1)
KY997_08620	PF00082	Subtilase family
KY997_08625	PF11132	Transcriptional regulator protein (SplA)
KY997_08630	PF01769	Divalent cation transporter
KY997_08630	PF03448	MgtE intracellular N domain
KY997_08630	PF00571	CBS domain
KY997_08640	PF13411	MerR HTH family regulatory protein
KY997_08655	PF01047	MarR family
KY997_08680	PF03741	Integral membrane protein TerC family
KY997_08685	PF04542	Sigma-70 region 2 
KY997_08695	PF00269	Small, acid-soluble spore proteins, alpha/beta type
KY997_08700	PF08876	Domain of unknown function (DUF1836)
KY997_08705	PF01435	Peptidase family M48
KY997_08710	PF02386	Cation transport protein
KY997_08735	PF01757	Acyltransferase family
KY997_08775	PF00596	Class II Aldolase and Adducin N-terminal domain
KY997_08780	PF00596	Class II Aldolase and Adducin N-terminal domain
KY997_08785	PF03079	ARD/ARD' family
KY997_08790	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_08795	PF06803	Protein of unknown function (DUF1232)
KY997_08805	PF02743	Cache domain
KY997_08805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_08805	PF00512	His Kinase A (phospho-acceptor) domain
KY997_08810	PF01047	MarR family
KY997_08815	PF00691	OmpA family
KY997_08815	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
KY997_08820	PF01618	MotA/TolQ/ExbB proton channel family
KY997_08825	PF17871	AAA lid domain
KY997_08825	PF07724	AAA domain (Cdc48 subfamily)
KY997_08825	PF00004	ATPase family associated with various cellular activities (AAA)
KY997_08825	PF10431	C-terminal, D2-small domain, of ClpB protein 
KY997_08835	PF06508	Queuosine biosynthesis protein QueC
KY997_08840	PF01242	6-pyruvoyl tetrahydropterin synthase
KY997_08845	PF04055	Radical SAM superfamily
KY997_08850	PF14489	QueF-like protein
KY997_08855	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_08855	PF13176	Tetratricopeptide repeat
KY997_08865	PF05675	Protein of unknown function (DUF817)
KY997_08870	PF13443	Cro/C1-type HTH DNA-binding domain
KY997_08875	PF11188	Protein of unknown function (DUF2975)
KY997_08905	PF09953	Uncharacterized protein conserved in bacteria (DUF2187)
KY997_08915	PF07486	Cell Wall Hydrolase
KY997_08925	PF00578	AhpC/TSA family
KY997_08935	PF00557	Metallopeptidase family M24
KY997_08935	PF01321	Creatinase/Prolidase N-terminal domain
KY997_08945	PF00532	Periplasmic binding proteins and sugar binding domain of LacI family
KY997_08945	PF00356	Bacterial regulatory proteins, lacI family
KY997_08950	PF00874	PRD domain
KY997_08950	PF03123	CAT RNA binding domain
KY997_08955	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
KY997_08955	PF00367	phosphotransferase system, EIIB
KY997_08955	PF02378	Phosphotransferase system, EIIC 
KY997_08960	PF00381	PTS HPr component phosphorylation site
KY997_08965	PF00391	PEP-utilising enzyme, mobile domain
KY997_08965	PF05524	PEP-utilising enzyme, N-terminal
KY997_08965	PF02896	PEP-utilising enzyme, TIM barrel domain
KY997_08970	PF11132	Transcriptional regulator protein (SplA)
KY997_08980	PF00583	Acetyltransferase (GNAT) family
KY997_08985	PF02743	Cache domain
KY997_08985	PF00672	HAMP domain
KY997_08985	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_09005	PF03717	Penicillin-binding Protein dimerisation domain
KY997_09005	PF00905	Penicillin binding protein transpeptidase domain
KY997_09010	PF08447	PAS fold
KY997_09010	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_09010	PF00512	His Kinase A (phospho-acceptor) domain
KY997_09010	PF00989	PAS fold
KY997_09025	PF06271	RDD family
KY997_09035	PF01584	CheW-like domain
KY997_09035	PF00072	Response regulator receiver domain
KY997_09040	PF14177	YkyB-like protein
KY997_09050	PF01476	LysM domain
KY997_09050	PF03734	L,D-transpeptidase catalytic domain
KY997_09055	PF00149	Calcineurin-like phosphoesterase
KY997_09055	PF10518	TAT (twin-arginine translocation) pathway signal sequence
KY997_09065	PF00563	EAL domain
KY997_09065	PF10388	EAL-domain associated signalling protein domain
KY997_09075	PF08796	Protein of unknown function (DUF1797)
KY997_09085	PF04308	Ribonuclease H-like
KY997_09090	PF14156	Antirepressor AbbA
KY997_09100	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_09100	PF03466	LysR substrate binding domain
KY997_09105	PF00258	Flavodoxin
KY997_09115	PF00258	Flavodoxin
KY997_09120	PF08503	Tetrahydrodipicolinate succinyltransferase N-terminal
KY997_09120	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_09120	PF14602	Hexapeptide repeat of succinyl-transferase
KY997_09125	PF07687	Peptidase dimerisation domain
KY997_09125	PF01546	Peptidase family M20/M25/M40
KY997_09130	PF03698	Uncharacterised protein family (UPF0180)
KY997_09135	PF10417	C-terminal domain of 1-Cys peroxiredoxin
KY997_09135	PF00578	AhpC/TSA family
KY997_09140	PF00578	AhpC/TSA family
KY997_09155	PF12804	MobA-like NTP transferase domain
KY997_09180	PF02597	ThiS family
KY997_09200	PF04893	Yip1 domain
KY997_09205	PF16576	Barrel-sandwich domain of CusB or HlyD membrane-fusion
KY997_09220	PF00455	DeoR C terminal sensor domain
KY997_09220	PF08220	DeoR-like helix-turn-helix domain
KY997_09230	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_09230	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_09245	PF00005	ABC transporter
KY997_09245	PF12848	ABC transporter
KY997_09270	PF18277	AbrB C-terminal domain
KY997_09270	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
KY997_09275	PF00512	His Kinase A (phospho-acceptor) domain
KY997_09275	PF00989	PAS fold
KY997_09275	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_09290	PF00753	Metallo-beta-lactamase superfamily
KY997_09290	PF17770	Ribonuclease J C-terminal domain
KY997_09290	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
KY997_09295	PF07288	Protein of unknown function (DUF1447)
KY997_09305	PF01327	Polypeptide deformylase
KY997_09325	PF02779	Transketolase, pyrimidine binding domain
KY997_09325	PF02780	Transketolase, C-terminal domain
KY997_09330	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
KY997_09330	PF00364	Biotin-requiring enzyme
KY997_09330	PF02817	e3 binding domain
KY997_09335	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_09335	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
KY997_09345	PF13790	SR1 protein
KY997_09360	PF05256	Uncharacterised protein family (UPF0223)
KY997_09365	PF06335	Protein of unknown function (DUF1054)
KY997_09375	PF00459	Inositol monophosphatase family
KY997_09380	PF00583	Acetyltransferase (GNAT) family
KY997_09395	PF04542	Sigma-70 region 2 
KY997_09395	PF08281	Sigma-70, region 4
KY997_09400	PF13490	Putative zinc-finger
KY997_09410	PF00679	Elongation factor G C-terminus
KY997_09410	PF14492	Elongation Factor G, domain II
KY997_09410	PF00009	Elongation factor Tu GTP binding domain
KY997_09410	PF03144	Elongation factor Tu domain 2
KY997_09415	PF14036	YlaH-like protein
KY997_09420	PF01047	MarR family
KY997_09430	PF09963	Uncharacterized protein conserved in bacteria (DUF2197)
KY997_09435	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
KY997_09450	PF04960	Glutaminase
KY997_09455	PF07408	Protein of unknown function (DUF1507)
KY997_09460	PF01098	Cell cycle protein
KY997_09470	PF02628	Cytochrome oxidase assembly protein
KY997_09475	PF01040	UbiA prenyltransferase family
KY997_09480	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
KY997_09480	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
KY997_09480	PF00034	Cytochrome c
KY997_09485	PF00115	Cytochrome C and Quinol oxidase polypeptide I
KY997_09490	PF00510	Cytochrome c oxidase subunit III
KY997_09495	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
KY997_09505	PF08868	YugN-like family
KY997_09510	PF00571	CBS domain
KY997_09520	PF14071	Putative coat protein
KY997_09525	PF14003	YlbE-like protein
KY997_09530	PF06133	Control of competence regulator ComK, YlbF/YmcA
KY997_09535	PF09902	Uncharacterized protein conserved in bacteria (DUF2129)
KY997_09550	PF01467	Cytidylyltransferase-like
KY997_09555	PF07670	Nucleoside recognition
KY997_09565	PF05636	HIGH Nucleotidyl Transferase
KY997_09570	PF02620	Large ribosomal RNA subunit accumulation protein YceD
KY997_09585	PF00583	Acetyltransferase (GNAT) family
KY997_09600	PF02381	MraZ protein, putative antitoxin-like
KY997_09605	PF01795	MraW methylase family
KY997_09615	PF03793	PASTA domain
KY997_09615	PF03717	Penicillin-binding Protein dimerisation domain
KY997_09615	PF00905	Penicillin binding protein transpeptidase domain
KY997_09625	PF02875	Mur ligase family, glutamate ligase domain
KY997_09625	PF08245	Mur ligase middle domain
KY997_09625	PF01225	Mur ligase family, catalytic domain
KY997_09630	PF10555	Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 
KY997_09630	PF00953	Glycosyl transferase family 4
KY997_09650	PF01565	FAD binding domain 
KY997_09650	PF02873	UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
KY997_09655	PF08478	POTRA domain, FtsQ-type
KY997_09665	PF05949	Bacterial protein of unknown function (DUF881)
KY997_09670	PF06947	Protein of unknown function (DUF1290)
KY997_09680	PF12327	FtsZ family, C-terminal domain
KY997_09680	PF00091	Tubulin/FtsZ family, GTPase domain
KY997_09705	PF04542	Sigma-70 region 2 
KY997_09705	PF04539	Sigma-70 region 3
KY997_09705	PF04545	Sigma-70, region 4
KY997_09710	PF00005	ABC transporter
KY997_09725	PF05239	PRC-barrel domain
KY997_09730	PF02578	Multi-copper polyphenol oxidoreductase laccase
KY997_09735	PF01168	Alanine racemase, N-terminal domain
KY997_09740	PF04472	Cell division protein SepF
KY997_09745	PF02325	YGGT family
KY997_09755	PF05103	DivIVA protein
KY997_09765	PF01258	Prokaryotic dksA/traR C4-type zinc finger
KY997_09770	PF01252	Signal peptidase (SPase) II
KY997_09775	PF00849	RNA pseudouridylate synthase
KY997_09775	PF01479	S4 domain
KY997_09780	PF00156	Phosphoribosyl transferase domain
KY997_09785	PF00860	Permease family
KY997_09795	PF01979	Amidohydrolase family
KY997_09815	PF01180	Dihydroorotate dehydrogenase
KY997_09820	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
KY997_09825	PF00156	Phosphoribosyl transferase domain
KY997_09835	PF01507	Phosphoadenosine phosphosulfate reductase family
KY997_09855	PF00590	Tetrapyrrole (Corrin/Porphyrin) Methylases
KY997_09880	PF08340	Domain of unknown function (DUF1732)
KY997_09880	PF03755	YicC-like family, N-terminal region 
KY997_09885	PF04025	Domain of unknown function (DUF370)
KY997_09895	PF01192	RNA polymerase Rpb6 
KY997_09905	PF00271	Helicase conserved C-terminal domain
KY997_09905	PF18074	Primosomal protein N C-terminal domain
KY997_09905	PF04851	Type III restriction enzyme, res subunit
KY997_09905	PF18319	PriA DNA helicase Cys-rich region (CRR) domain
KY997_09905	PF17764	3′ DNA-binding domain (3′BD)
KY997_09910	PF01327	Polypeptide deformylase
KY997_09920	PF01029	NusB family
KY997_09920	PF01189	16S rRNA methyltransferase RsmB/F
KY997_09925	PF04055	Radical SAM superfamily
KY997_09940	PF16745	RsgA N-terminal domain
KY997_09940	PF03193	RsgA GTPase
KY997_09945	PF00834	Ribulose-phosphate 3 epimerase family
KY997_09955	PF08183	Stage V sporulation protein family
KY997_09965	PF03780	Asp23 family, cell envelope-related function
KY997_09990	PF03061	Thioesterase superfamily
KY997_09990	PF08279	HTH domain
KY997_10000	PF00698	Acyl transferase domain
KY997_10010	PF00550	Phosphopantetheine attachment site
KY997_10015	PF00035	Double-stranded RNA binding motif
KY997_10015	PF14622	Ribonuclease-III-like
KY997_10025	PF00448	SRP54-type protein, GTPase domain
KY997_10025	PF02881	SRP54-type protein, helical bundle domain
KY997_10030	PF04297	Putative helix-turn-helix protein, YlxM / p13 like
KY997_10035	PF00448	SRP54-type protein, GTPase domain
KY997_10035	PF02881	SRP54-type protein, helical bundle domain
KY997_10035	PF02978	Signal peptide binding domain
KY997_10040	PF00886	Ribosomal protein S16
KY997_10050	PF11068	YlqD protein
KY997_10055	PF05239	PRC-barrel domain
KY997_10055	PF01782	RimM N-terminal domain
KY997_10065	PF01245	Ribosomal protein L19
KY997_10070	PF01926	50S ribosome-binding GTPase
KY997_10075	PF01351	Ribonuclease HII
KY997_10085	PF01312	FlhB HrpN YscU SpaS Family
KY997_10090	PF00549	CoA-ligase
KY997_10090	PF08442	ATP-grasp domain
KY997_10095	PF00549	CoA-ligase
KY997_10095	PF02629	CoA binding domain
KY997_10100	PF02481	DNA recombination-mediator protein A
KY997_10105	PF01751	Toprim domain
KY997_10105	PF01131	DNA topoisomerase
KY997_10105	PF01396	Topoisomerase DNA binding C4 zinc finger
KY997_10110	PF01134	Glucose inhibited division protein A
KY997_10120	PF00227	Proteasome subunit
KY997_10125	PF10431	C-terminal, D2-small domain, of ClpB protein 
KY997_10125	PF00004	ATPase family associated with various cellular activities (AAA)
KY997_10125	PF07724	AAA domain (Cdc48 subfamily)
KY997_10130	PF08222	CodY helix-turn-helix domain
KY997_10130	PF06018	CodY GAF-like domain
KY997_10135	PF00460	Flagella basal body rod protein
KY997_10140	PF00460	Flagella basal body rod protein
KY997_10140	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
KY997_10145	PF02049	Flagellar hook-basal body complex protein FliE
KY997_10150	PF01514	Secretory protein of YscJ/FliF family
KY997_10150	PF08345	Flagellar M-ring protein C-terminal
KY997_10155	PF01706	FliG C-terminal domain
KY997_10155	PF14842	FliG N-terminal domain
KY997_10155	PF14841	FliG middle domain
KY997_10160	PF02108	Flagellar assembly protein FliH
KY997_10170	PF02050	Flagellar FliJ protein
KY997_10180	PF02120	Flagellar hook-length control protein FliK
KY997_10185	PF03963	Flagellar hook capping protein - N-terminal region
KY997_10190	PF00460	Flagella basal body rod protein
KY997_10190	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
KY997_10195	PF06289	Flagellar and Swarming motility proteins
KY997_10200	PF03748	Flagellar basal body-associated protein FliL
KY997_10205	PF02154	Flagellar motor switch protein FliM
KY997_10205	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
KY997_10210	PF04509	CheC-like family
KY997_10210	PF01052	Type III flagellar switch regulator (C-ring) FliN C-term
KY997_10215	PF00072	Response regulator receiver domain
KY997_10225	PF00813	FliP family
KY997_10230	PF01313	Bacterial export proteins, family 3
KY997_10235	PF01311	Bacterial export proteins, family 1
KY997_10240	PF01312	FlhB HrpN YscU SpaS Family
KY997_10245	PF00771	FHIPEP family
KY997_10250	PF00448	SRP54-type protein, GTPase domain
KY997_10255	PF10609	NUBPL iron-transfer P-loop NTPase
KY997_10260	PF01339	CheB methylesterase
KY997_10260	PF00072	Response regulator receiver domain
KY997_10270	PF01584	CheW-like domain
KY997_10275	PF04509	CheC-like family
KY997_10280	PF03975	CheD chemotactic sensory transduction
KY997_10285	PF04539	Sigma-70 region 3
KY997_10285	PF04545	Sigma-70, region 4
KY997_10285	PF04542	Sigma-70 region 2 
KY997_10300	PF00889	Elongation factor TS
KY997_10305	PF00696	Amino acid kinase family
KY997_10315	PF01255	Putative undecaprenyl diphosphate synthase
KY997_10325	PF13288	DXP reductoisomerase C-terminal domain
KY997_10325	PF02670	1-deoxy-D-xylulose 5-phosphate reductoisomerase
KY997_10325	PF08436	1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
KY997_10330	PF17820	PDZ domain
KY997_10330	PF02163	Peptidase family M50
KY997_10335	PF03129	Anticodon binding domain
KY997_10335	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
KY997_10335	PF04073	Aminoacyl-tRNA editing domain
KY997_10340	PF07733	Bacterial DNA polymerase III alpha NTPase domain
KY997_10340	PF14579	Helix-hairpin-helix motif
KY997_10340	PF02811	PHP domain
KY997_10340	PF00929	Exonuclease
KY997_10340	PF11490	DNA polymerase III polC-type N-terminus II
KY997_10340	PF14480	DNA polymerase III polC-type N-terminus I
KY997_10340	PF17657	Bacterial DNA polymerase III alpha subunit finger domain
KY997_10350	PF00942	Cellulose binding domain
KY997_10350	PF02011	Glycosyl hydrolase family 48
KY997_10350	PF00759	Glycosyl hydrolase family 9
KY997_10365	PF02576	RimP N-terminal domain
KY997_10365	PF17384	RimP C-terminal SH3 domain
KY997_10370	PF00575	S1 RNA binding domain
KY997_10370	PF13184	NusA-like KH domain
KY997_10370	PF08529	NusA N-terminal domain
KY997_10375	PF04296	Protein of unknown function (DUF448)
KY997_10385	PF00009	Elongation factor Tu GTP binding domain
KY997_10385	PF11987	Translation-initiation factor 2
KY997_10385	PF04760	Translation initiation factor IF-2, N-terminal region
KY997_10390	PF04456	Protein of unknown function (DUF503)
KY997_10395	PF02033	Ribosome-binding factor A
KY997_10410	PF00312	Ribosomal protein S15
KY997_10415	PF00575	S1 RNA binding domain
KY997_10415	PF00013	KH domain
KY997_10415	PF03726	Polyribonucleotide nucleotidyltransferase, RNA binding domain
KY997_10415	PF01138	3' exoribonuclease family, domain 1
KY997_10415	PF03725	3' exoribonuclease family, domain 2
KY997_10420	PF01522	Polysaccharide deacetylase
KY997_10430	PF05239	PRC-barrel domain
KY997_10440	PF02441	Flavoprotein
KY997_10450	PF13840	ACT domain 
KY997_10450	PF00696	Amino acid kinase family
KY997_10455	PF00701	Dihydrodipicolinate synthetase family
KY997_10460	PF00753	Metallo-beta-lactamase superfamily
KY997_10460	PF07521	Zn-dependent metallo-hydrolase RNA specificity domain
KY997_10460	PF17770	Ribonuclease J C-terminal domain
KY997_10465	PF00574	Clp protease
KY997_10470	PF14035	YlzJ-like protein
KY997_10475	PF17854	FtsK alpha domain
KY997_10475	PF01580	FtsK/SpoIIIE family
KY997_10475	PF09397	Ftsk gamma domain
KY997_10480	PF00392	Bacterial regulatory proteins, gntR family
KY997_10480	PF07702	UTRA domain
KY997_10490	PF05193	Peptidase M16 inactive domain
KY997_10505	PF11588	Protein of unknown function (DUF3243)
KY997_10510	PF11868	Protein of unknown function (DUF3388)
KY997_10525	PF02464	Competence-damaged protein
KY997_10525	PF18146	Damage-inducible protein CinA KH domain
KY997_10525	PF00994	Probable molybdopterin binding domain
KY997_10540	PF13277	YmdB-like protein
KY997_10545	PF04232	Stage V sporulation protein S (SpoVS)
KY997_10550	PF01244	Membrane dipeptidase (Peptidase family M19)
KY997_10555	PF08240	Alcohol dehydrogenase GroES-like domain
KY997_10555	PF00107	Zinc-binding dehydrogenase
KY997_10560	PF00155	Aminotransferase class I and II
KY997_10565	PF00919	Uncharacterized protein family UPF0004
KY997_10565	PF01938	TRAM domain
KY997_10565	PF04055	Radical SAM superfamily
KY997_10570	PF06133	Control of competence regulator ComK, YlbF/YmcA
KY997_10575	PF10628	Outer spore coat protein E (CotE)
KY997_10590	PF03992	Antibiotic biosynthesis monooxygenase
KY997_10600	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_10600	PF13181	Tetratricopeptide repeat
KY997_10630	PF02492	CobW/HypB/UreG, nucleotide-binding domain
KY997_10630	PF07683	Cobalamin synthesis protein cobW C-terminal domain
KY997_10645	PF11208	Protein of unknown function (DUF2992)
KY997_10660	PF01593	Flavin containing amine oxidoreductase
KY997_10665	PF06912	Protein of unknown function (DUF1275)
KY997_10680	PF00561	alpha/beta hydrolase fold
KY997_10700	PF01906	Putative heavy-metal-binding
KY997_10705	PF09335	SNARE associated Golgi protein
KY997_10710	PF00144	Beta-lactamase
KY997_10710	PF11954	Domain of unknown function (DUF3471)
KY997_10715	PF04101	Glycosyltransferase family 28 C-terminal domain
KY997_10720	PF13520	Amino acid permease
KY997_10725	PF07875	Coat F domain
KY997_10745	PF12680	SnoaL-like domain
KY997_10760	PF02566	OsmC-like protein
KY997_10770	PF00893	Small Multidrug Resistance protein
KY997_10790	PF17209	Hfq protein
KY997_10800	PF07972	NrdI Flavodoxin like 
KY997_10810	PF00268	Ribonucleotide reductase, small chain
KY997_10820	PF00753	Metallo-beta-lactamase superfamily
KY997_10825	PF01592	NifU-like N terminal domain
KY997_10830	PF01475	Ferric uptake regulator family
KY997_10840	PF13536	Putative multidrug resistance efflux transporter
KY997_10845	PF01520	N-acetylmuramoyl-L-alanine amidase
KY997_10845	PF05036	Sporulation related domain
KY997_10880	PF17934	Tetracyclin repressor-like, C-terminal domain
KY997_10880	PF00440	Bacterial regulatory proteins, tetR family
KY997_10895	PF05378	Hydantoinase/oxoprolinase N-terminal region
KY997_10895	PF01968	Hydantoinase/oxoprolinase
KY997_10915	PF09346	SMI1 / KNR4 family (SUKH-1)
KY997_10975	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_10990	PF00547	Urease, gamma subunit
KY997_10995	PF00699	Urease beta subunit
KY997_11000	PF00449	Urease alpha-subunit, N-terminal domain
KY997_11000	PF01979	Amidohydrolase family
KY997_11005	PF05194	UreE urease accessory protein, C-terminal domain
KY997_11005	PF02814	UreE urease accessory protein, N-terminal domain
KY997_11010	PF01730	UreF
KY997_11015	PF02492	CobW/HypB/UreG, nucleotide-binding domain
KY997_11025	PF13386	Cytochrome C biogenesis protein transmembrane region 
KY997_11030	PF03551	Transcriptional regulator PadR-like family
KY997_11030	PF10400	Virulence activator alpha C-term
KY997_11045	PF00004	ATPase family associated with various cellular activities (AAA)
KY997_11045	PF17866	AAA lid domain
KY997_11060	PF09346	SMI1 / KNR4 family (SUKH-1)
KY997_11070	PF04740	LXG domain of WXG superfamily
KY997_11105	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_11125	PF01510	N-acetylmuramoyl-L-alanine amidase
KY997_11145	PF05709	Phage tail protein
KY997_11315	PF03237	Terminase-like family
KY997_11340	PF09642	YonK protein
KY997_11355	PF00216	Bacterial DNA-binding protein
KY997_11375	PF10049	Protein of unknown function (DUF2283)
KY997_11475	PF13443	Cro/C1-type HTH DNA-binding domain
KY997_11500	PF08808	RES domain
KY997_11545	PF05922	Peptidase inhibitor I9
KY997_11545	PF00082	Subtilase family
KY997_11575	PF02899	Phage integrase, N-terminal SAM-like domain
KY997_11575	PF00589	Phage integrase family
KY997_11580	PF14072	DNA-sulfur modification-associated
KY997_11615	PF14490	Helix-hairpin-helix containing domain
KY997_11615	PF18335	ATP-dependent RecD-like DNA helicase SH3 domain
KY997_11615	PF13538	UvrD-like helicase C-terminal domain
KY997_11620	PF06908	YspA SLOG family
KY997_11655	PF01068	ATP dependent DNA ligase domain
KY997_11670	PF09643	YopX protein
KY997_11735	PF17768	RecJ OB domain
KY997_11735	PF01368	DHH family
KY997_11830	PF00317	Ribonucleotide reductase, all-alpha domain
KY997_11830	PF08343	Ribonucleotide reductase N-terminal
KY997_11830	PF02867	Ribonucleotide reductase, barrel domain
KY997_11850	PF00268	Ribonucleotide reductase, small chain
KY997_11855	PF00085	Thioredoxin
KY997_11865	PF00692	dUTPase
KY997_11885	PF00303	Thymidylate synthase
KY997_11905	PF00269	Small, acid-soluble spore proteins, alpha/beta type
KY997_11910	PF00149	Calcineurin-like phosphoesterase
KY997_11930	PF08719	Domain of unknown function (DUF1768)
KY997_11955	PF00004	ATPase family associated with various cellular activities (AAA)
KY997_11955	PF17866	AAA lid domain
KY997_11965	PF06838	Methionine gamma-lyase 
KY997_11970	PF13411	MerR HTH family regulatory protein
KY997_12020	PF02080	TrkA-C domain
KY997_12025	PF00999	Sodium/hydrogen exchanger family
KY997_12070	PF17934	Tetracyclin repressor-like, C-terminal domain
KY997_12070	PF00440	Bacterial regulatory proteins, tetR family
KY997_12075	PF00893	Small Multidrug Resistance protein
KY997_12100	PF00578	AhpC/TSA family
KY997_12105	PF05067	Manganese containing catalase
KY997_12130	PF01047	MarR family
KY997_12145	PF03358	NADPH-dependent FMN reductase
KY997_12160	PF00303	Thymidylate synthase
KY997_12165	PF14040	Deoxyribonuclease NucA/NucB
KY997_12175	PF01476	LysM domain
KY997_12180	PF00239	Resolvase, N terminal domain
KY997_12185	PF05979	Bacterial protein of unknown function (DUF896)
KY997_12190	PF00456	Transketolase, thiamine diphosphate binding domain
KY997_12190	PF02780	Transketolase, C-terminal domain
KY997_12190	PF02779	Transketolase, pyrimidine binding domain
KY997_12195	PF10747	Sporulation inhibitor of replication protein SirA 
KY997_12200	PF03672	Uncharacterised protein family (UPF0154)
KY997_12210	PF02683	Cytochrome C biogenesis protein transmembrane region
KY997_12215	PF00072	Response regulator receiver domain
KY997_12220	PF07301	Protein of unknown function (DUF1453)
KY997_12225	PF11084	Protein of unknown function (DUF2621)
KY997_12235	PF08179	Small acid-soluble spore protein P family
KY997_12245	PF00694	Aconitase C-terminal domain
KY997_12245	PF00330	Aconitase family (aconitate hydratase)
KY997_12250	PF00578	AhpC/TSA family
KY997_12255	PF13040	Fur-regulated basic protein B
KY997_12260	PF08177	Small acid-soluble spore protein N family
KY997_12270	PF03061	Thioesterase superfamily
KY997_12290	PF01521	Iron-sulphur cluster biosynthesis
KY997_12295	PF02660	Glycerol-3-phosphate acyltransferase
KY997_12300	PF13380	CoA binding domain
KY997_12325	PF00596	Class II Aldolase and Adducin N-terminal domain
KY997_12330	PF11762	L-arabinose isomerase C-terminal domain
KY997_12330	PF02610	L-arabinose isomerase
KY997_12340	PF00106	short chain dehydrogenase
KY997_12350	PF01235	Sodium:alanine symporter family
KY997_12365	PF02613	Nitrate reductase delta subunit
KY997_12370	PF13247	4Fe-4S dicluster domain
KY997_12370	PF14711	Respiratory nitrate reductase beta C-terminal
KY997_12375	PF00384	Molybdopterin oxidoreductase
KY997_12375	PF14710	Respiratory nitrate reductase alpha N-terminal
KY997_12375	PF01568	Molydopterin dinucleotide binding domain
KY997_12420	PF00027	Cyclic nucleotide-binding domain
KY997_12420	PF13545	Crp-like helix-turn-helix domain
KY997_12425	PF00115	Cytochrome C and Quinol oxidase polypeptide I
KY997_12430	PF01814	Hemerythrin HHE cation binding domain
KY997_12430	PF04405	Domain of Unknown function (DUF542)  
KY997_12435	PF07098	Protein of unknown function (DUF1360)
KY997_12445	PF17452	Uncharacterized YnfE-like
KY997_12450	PF13302	Acetyltransferase (GNAT) domain
KY997_12475	PF13229	Right handed beta helix region
KY997_12490	PF12706	Beta-lactamase superfamily domain
KY997_12515	PF00171	Aldehyde dehydrogenase family
KY997_12525	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
KY997_12525	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
KY997_12525	PF02770	Acyl-CoA dehydrogenase, middle domain
KY997_12535	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_12535	PF02378	Phosphotransferase system, EIIC 
KY997_12535	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_12560	PF00005	ABC transporter
KY997_12565	PF00392	Bacterial regulatory proteins, gntR family
KY997_12570	PF00106	short chain dehydrogenase
KY997_12575	PF03786	D-mannonate dehydratase (UxuA)
KY997_12580	PF01055	Glycosyl hydrolases family 31 
KY997_12580	PF13802	Galactose mutarotase-like
KY997_12580	PF17137	Domain of unknown function (DUF5110)
KY997_12580	PF16338	Domain of unknown function (DUF4968)
KY997_12585	PF06808	Tripartite ATP-independent periplasmic transporter, DctM component
KY997_12595	PF03480	Bacterial extracellular solute-binding protein, family 7
KY997_12605	PF01451	Low molecular weight phosphotyrosine protein phosphatase
KY997_12610	PF02040	Arsenical pump membrane protein
KY997_12615	PF01022	Bacterial regulatory protein, arsR family
KY997_12630	PF06800	Sugar transport protein
KY997_12635	PF02638	Glycosyl hydrolase-like 10
KY997_12645	PF04055	Radical SAM superfamily
KY997_12670	PF00005	ABC transporter
KY997_12685	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_12690	PF07849	Protein of unknown function (DUF1641)
KY997_12695	PF12728	Helix-turn-helix domain
KY997_12705	PF13193	AMP-binding enzyme C-terminal domain
KY997_12705	PF00501	AMP-binding enzyme
KY997_12705	PF16177	Acetyl-coenzyme A synthetase N-terminus
KY997_12710	PF01039	Carboxyl transferase domain
KY997_12715	PF00378	Enoyl-CoA hydratase/isomerase
KY997_12720	PF00682	HMGL-like
KY997_12725	PF00364	Biotin-requiring enzyme
KY997_12730	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
KY997_12730	PF00289	Biotin carboxylase, N-terminal domain
KY997_12730	PF02785	Biotin carboxylase C-terminal domain
KY997_12735	PF00975	Thioesterase domain
KY997_12735	PF00501	AMP-binding enzyme
KY997_12735	PF13193	AMP-binding enzyme C-terminal domain
KY997_12735	PF00550	Phosphopantetheine attachment site
KY997_12735	PF00668	Condensation domain
KY997_12760	PF13193	AMP-binding enzyme C-terminal domain
KY997_12760	PF00501	AMP-binding enzyme
KY997_12765	PF00441	Acyl-CoA dehydrogenase, C-terminal domain
KY997_12765	PF02771	Acyl-CoA dehydrogenase, N-terminal domain
KY997_12765	PF02770	Acyl-CoA dehydrogenase, middle domain
KY997_12770	PF02525	Flavodoxin-like fold
KY997_12775	PF01638	HxlR-like helix-turn-helix
KY997_12790	PF03807	NADP oxidoreductase coenzyme F420-dependent
KY997_12790	PF14748	Pyrroline-5-carboxylate reductase dimerisation
KY997_12795	PF04239	Protein of unknown function (DUF421)
KY997_12815	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_12820	PF13378	Enolase C-terminal domain-like
KY997_12820	PF02746	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
KY997_12830	PF00535	Glycosyl transferase family 2
KY997_12845	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_12845	PF14691	Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
KY997_12885	PF00664	ABC transporter transmembrane region
KY997_12885	PF00005	ABC transporter
KY997_12890	PF00067	Cytochrome P450
KY997_12895	PF00106	short chain dehydrogenase
KY997_12900	PF01326	Pyruvate phosphate dikinase, PEP/pyruvate binding domain
KY997_12900	PF00391	PEP-utilising enzyme, mobile domain
KY997_12905	PF07690	Major Facilitator Superfamily
KY997_12915	PF01047	MarR family
KY997_12930	PF05504	Spore germination B3/ GerAC like, C-terminal 
KY997_12945	PF03323	Bacillus/Clostridium GerA spore germination protein
KY997_12960	PF01588	Putative tRNA binding domain
KY997_12965	PF00082	Subtilase family
KY997_12970	PF17329	Family of unknown function (DUF5367)
KY997_12975	PF17932	Tetracyclin repressor-like, C-terminal domain
KY997_12975	PF00440	Bacterial regulatory proteins, tetR family
KY997_12980	PF01047	MarR family
KY997_12985	PF01966	HD domain
KY997_13010	PF13305	Tetracyclin repressor-like, C-terminal domain
KY997_13010	PF00440	Bacterial regulatory proteins, tetR family
KY997_13015	PF00753	Metallo-beta-lactamase superfamily
KY997_13065	PF02719	Polysaccharide biosynthesis protein
KY997_13080	PF00534	Glycosyl transferases group 1
KY997_13085	PF04238	Protein of unknown function (DUF420)
KY997_13100	PF02016	LD-carboxypeptidase N-terminal domain
KY997_13100	PF17676	LD-carboxypeptidase C-terminal domain
KY997_13105	PF00474	Sodium:solute symporter family
KY997_13110	PF06725	3D domain
KY997_13110	PF01476	LysM domain
KY997_13115	PF09382	RQC domain
KY997_13115	PF00270	DEAD/DEAH box helicase
KY997_13115	PF00271	Helicase conserved C-terminal domain
KY997_13115	PF16124	RecQ zinc-binding
KY997_13115	PF00570	HRDC domain
KY997_13135	PF04237	YjbR
KY997_13145	PF07849	Protein of unknown function (DUF1641)
KY997_13155	PF14172	Domain of unknown function (DUF4309)
KY997_13165	PF14449	Pre-toxin TG
KY997_13165	PF04740	LXG domain of WXG superfamily
KY997_13180	PF07238	PilZ domain
KY997_13180	PF07317	Flagellar regulator YcgR
KY997_13210	PF13217	Protein of unknown function (DUF4025)
KY997_13215	PF03795	YCII-related domain
KY997_13240	PF11122	Inner spore coat protein D
KY997_13250	PF00561	alpha/beta hydrolase fold
KY997_13250	PF08386	TAP-like protein
KY997_13260	PF11122	Inner spore coat protein D
KY997_13265	PF01810	LysE type translocator
KY997_13270	PF00253	Ribosomal protein S14p/S29e
KY997_13295	PF10710	Protein of unknown function (DUF2512)
KY997_13305	PF02525	Flavodoxin-like fold
KY997_13310	PF00144	Beta-lactamase
KY997_13325	PF01258	Prokaryotic dksA/traR C4-type zinc finger
KY997_13330	PF08000	Bacterial PH domain
KY997_13340	PF00171	Aldehyde dehydrogenase family
KY997_13350	PF01636	Phosphotransferase enzyme family
KY997_13365	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
KY997_13365	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
KY997_13385	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
KY997_13385	PF00364	Biotin-requiring enzyme
KY997_13385	PF02817	e3 binding domain
KY997_13400	PF07728	AAA domain (dynein-related subfamily)
KY997_13405	PF13627	Prokaryotic lipoprotein-attachment site
KY997_13405	PF00080	Copper/zinc superoxide dismutase (SODC)
KY997_13410	PF01476	LysM domain
KY997_13410	PF00877	NlpC/P60 family
KY997_13420	PF02585	GlcNAc-PI de-N-acetylase
KY997_13425	PF08830	Protein of unknown function (DUF1806)
KY997_13435	PF00892	EamA-like transporter family
KY997_13445	PF03330	Lytic transglycolase
KY997_13460	PF01638	HxlR-like helix-turn-helix
KY997_13475	PF11755	Protein of unknown function (DUF3311)
KY997_13480	PF00474	Sodium:solute symporter family
KY997_13490	PF08241	Methyltransferase domain
KY997_13505	PF01048	Phosphorylase superfamily
KY997_13525	PF14191	YodL-like
KY997_13545	PF06855	YozE SAM-like fold
KY997_13550	PF14122	YokU-like protein, putative antitoxin
KY997_13560	PF00583	Acetyltransferase (GNAT) family
KY997_13600	PF01641	SelR domain
KY997_13605	PF01625	Peptide methionine sulfoxide reductase
KY997_13610	PF01047	MarR family
KY997_13625	PF01554	MatE
KY997_13635	PF17431	Uncharacterized YmpT-like
KY997_13640	PF09911	Uncharacterized protein conserved in bacteria (DUF2140)
KY997_13650	PF02630	SCO1/SenC
KY997_13655	PF02645	Uncharacterised protein, DegV family COG1307
KY997_13675	PF03006	Haemolysin-III related
KY997_13685	PF00186	Dihydrofolate reductase
KY997_13690	PF04608	Phosphatidylglycerophosphatase A
KY997_13695	PF14005	YpjP-like protein
KY997_13705	PF06491	Disulphide isomerase
KY997_13720	PF01966	HD domain
KY997_13725	PF00255	Glutathione peroxidase
KY997_13735	PF04204	Homoserine O-succinyltransferase 
KY997_13740	PF00534	Glycosyl transferases group 1
KY997_13740	PF06925	Monogalactosyldiacylglycerol (MGDG) synthase
KY997_13750	PF00313	'Cold-shock' DNA-binding domain
KY997_13760	PF10819	Protein of unknown function (DUF2564)     
KY997_13765	PF10782	Zinc-finger
KY997_13770	PF13456	Reverse transcriptase-like
KY997_13775	PF02592	Putative vitamin uptake transporter
KY997_13780	PF13456	Reverse transcriptase-like
KY997_13790	PF01367	5'-3' exonuclease, C-terminal SAM fold
KY997_13790	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
KY997_13800	PF10752	Protein of unknown function (DUF2533) 
KY997_13815	PF04140	Isoprenylcysteine carboxyl methyltransferase (ICMT) family 
KY997_13835	PF00156	Phosphoribosyl transferase domain
KY997_13840	PF02074	Carboxypeptidase Taq (M32) metallopeptidase
KY997_13845	PF13307	Helicase C-terminal domain
KY997_13870	PF05103	DivIVA protein
KY997_13875	PF06908	YspA SLOG family
KY997_13880	PF11122	Inner spore coat protein D
KY997_13895	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
KY997_13910	PF14178	YppF-like protein
KY997_13915	PF08807	Bacterial domain of unknown function (DUF1798)
KY997_13930	PF10720	Protein of unknown function (DUF2515)
KY997_13940	PF00912	Transglycosylase
KY997_13940	PF00905	Penicillin binding protein transpeptidase domain
KY997_13950	PF10576	Iron-sulfur binding domain of endonuclease III
KY997_13950	PF00633	Helix-hairpin-helix motif
KY997_13950	PF00730	HhH-GPD superfamily base excision DNA repair protein
KY997_13960	PF00152	tRNA synthetases class II (D, K and N) 
KY997_13960	PF01336	OB-fold nucleic acid binding domain
KY997_13965	PF00155	Aminotransferase class I and II
KY997_13970	PF03413	Peptidase propeptide and YPEB domain
KY997_13970	PF17881	Domain of unknown function (DUF5590)
KY997_13975	PF14084	Protein of unknown function (DUF4264)
KY997_13985	PF02261	Aspartate decarboxylase
KY997_13990	PF02569	Pantoate-beta-alanine ligase
KY997_13995	PF02548	Ketopantoate hydroxymethyltransferase
KY997_14000	PF02237	Biotin protein ligase C terminal domain
KY997_14000	PF03099	Biotin/lipoate A/B protein ligase family
KY997_14000	PF08279	HTH domain
KY997_14010	PF13439	Glycosyltransferase Family 4
KY997_14010	PF00534	Glycosyl transferases group 1
KY997_14015	PF02585	GlcNAc-PI de-N-acetylase
KY997_14020	PF02142	MGS-like domain
KY997_14025	PF05173	Dihydrodipicolinate reductase, C-terminus
KY997_14025	PF01113	Dihydrodipicolinate reductase, N-terminus
KY997_14035	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_14035	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_14040	PF09577	Sporulation protein YpjB (SpoYpjB)
KY997_14045	PF07187	Protein of unknown function (DUF1405)
KY997_14055	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
KY997_14055	PF00032	Cytochrome b(C-terminal)/b6/petD
KY997_14060	PF00033	Cytochrome b/b6/petB
KY997_14065	PF00355	Rieske [2Fe-2S] domain
KY997_14070	PF10673	Protein of unknown function (DUF2487)
KY997_14075	PF08864	UPF0302 domain
KY997_14075	PF08858	IDEAL domain
KY997_14095	PF00155	Aminotransferase class I and II
KY997_14100	PF00290	Tryptophan synthase alpha chain
KY997_14110	PF00697	N-(5'phosphoribosyl)anthranilate (PRA) isomerase
KY997_14120	PF02885	Glycosyl transferase family, helical bundle domain
KY997_14120	PF00591	Glycosyl transferase family, a/b domain
KY997_14130	PF07736	Chorismate mutase type I
KY997_14135	PF01761	3-dehydroquinate synthase
KY997_14145	PF01739	CheR methyltransferase, SAM binding domain
KY997_14145	PF03705	CheR methyltransferase, all-alpha domain
KY997_14150	PF00334	Nucleoside diphosphate kinase
KY997_14155	PF00348	Polyprenyl synthetase
KY997_14160	PF01209	ubiE/COQ5 methyltransferase family
KY997_14170	PF02081	Tryptophan RNA-binding attenuator protein
KY997_14180	PF00216	Bacterial DNA-binding protein
KY997_14185	PF09547	Stage IV sporulation protein A (spore_IV_A)
KY997_14195	PF10966	Protein of unknown function (DUF2768)
KY997_14200	PF07479	NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
KY997_14200	PF01210	NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
KY997_14205	PF14714	KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
KY997_14205	PF01926	50S ribosome-binding GTPase
KY997_14215	PF14045	YIEGIA protein
KY997_14225	PF14140	YpzI-like protein
KY997_14230	PF01070	FMN-dependent dehydrogenase
KY997_14235	PF00575	S1 RNA binding domain
KY997_14240	PF02224	Cytidylate kinase
KY997_14245	PF17313	Family of unknown function (DUF5359)
KY997_14260	PF13367	PrsW family intramembrane metalloprotease
KY997_14265	PF00710	Asparaginase, N-terminal
KY997_14265	PF17763	Glutaminase/Asparaginase C-terminal domain
KY997_14275	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
KY997_14275	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
KY997_14285	PF00149	Calcineurin-like phosphoesterase
KY997_14295	PF10864	Protein of unknown function (DUF2663)
KY997_14305	PF02517	CPBP intramembrane metalloprotease
KY997_14310	PF00270	DEAD/DEAH box helicase
KY997_14310	PF00271	Helicase conserved C-terminal domain
KY997_14315	PF14493	Helix-turn-helix domain
KY997_14325	PF12822	ECF transporter, substrate-specific component
KY997_14330	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
KY997_14330	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
KY997_14330	PF01842	ACT domain
KY997_14335	PF04225	Opacity-associated protein A LysM-like domain
KY997_14335	PF01551	Peptidase family M23
KY997_14345	PF04542	Sigma-70 region 2 
KY997_14345	PF08281	Sigma-70, region 4
KY997_14350	PF03816	Cell envelope-related transcriptional attenuator domain
KY997_14370	PF00072	Response regulator receiver domain
KY997_14370	PF00486	Transcriptional regulatory protein, C terminal
KY997_14380	PF00072	Response regulator receiver domain
KY997_14380	PF00486	Transcriptional regulatory protein, C terminal
KY997_14385	PF01578	Cytochrome C assembly protein
KY997_14390	PF05140	ResB-like family 
KY997_14395	PF00578	AhpC/TSA family
KY997_14400	PF01479	S4 domain
KY997_14400	PF00849	RNA pseudouridylate synthase
KY997_14405	PF07670	Nucleoside recognition
KY997_14410	PF07670	Nucleoside recognition
KY997_14415	PF00768	D-alanyl-D-alanine carboxypeptidase
KY997_14415	PF07943	Penicillin-binding protein 5, C-terminal domain
KY997_14420	PF13047	Protein of unknown function (DUF3907)
KY997_14425	PF04079	Segregation and condensation complex subunit ScpB
KY997_14430	PF02616	Segregation and condensation protein ScpA
KY997_14450	PF00583	Acetyltransferase (GNAT) family
KY997_14455	PF00885	6,7-dimethyl-8-ribityllumazine synthase
KY997_14470	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
KY997_14470	PF01872	RibD C-terminal domain
KY997_14500	PF06207	Protein of unknown function (DUF1002)
KY997_14505	PF05908	Poly-gamma-glutamate hydrolase
KY997_14510	PF02784	Pyridoxal-dependent decarboxylase, pyridoxal binding domain
KY997_14510	PF00278	Pyridoxal-dependent decarboxylase, C-terminal sheet domain
KY997_14525	PF14097	Stage V sporulation protein AE1
KY997_14530	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
KY997_14540	PF03862	SpoVAC/SpoVAEB sporulation membrane protein
KY997_14550	PF12164	Stage V sporulation protein AA
KY997_14555	PF04542	Sigma-70 region 2 
KY997_14555	PF04539	Sigma-70 region 3
KY997_14555	PF04545	Sigma-70, region 4
KY997_14560	PF13581	Histidine kinase-like ATPase domain
KY997_14565	PF01740	STAS domain
KY997_14580	PF01676	Metalloenzyme superfamily
KY997_14585	PF02899	Phage integrase, N-terminal SAM-like domain
KY997_14585	PF00589	Phage integrase family
KY997_14590	PF14004	Protein of unknown function (DUF4227)
KY997_14600	PF01944	Stage II sporulation protein M
KY997_14605	PF02378	Phosphotransferase system, EIIC 
KY997_14610	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_14615	PF02133	Permease for cytosine/purines, uracil, thiamine, allantoin
KY997_14625	PF13673	Acetyltransferase (GNAT) domain
KY997_14640	PF13072	Mother cell inhibitor of FtsZ
KY997_14650	PF13564	DoxX-like family
KY997_14670	PF10827	Protein of unknown function (DUF2552) 
KY997_14675	PF01521	Iron-sulphur cluster biosynthesis
KY997_14690	PF03992	Antibiotic biosynthesis monooxygenase
KY997_14700	PF01674	Lipase (class 2)
KY997_14710	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_14720	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_14725	PF00005	ABC transporter
KY997_14730	PF00005	ABC transporter
KY997_14730	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_14735	PF01554	MatE
KY997_14745	PF08863	YolD-like protein
KY997_14750	PF11798	IMS family HHH motif
KY997_14750	PF00817	impB/mucB/samB family
KY997_14750	PF11799	impB/mucB/samB family C-terminal domain
KY997_14755	PF14164	YqzH-like protein
KY997_14790	PF01569	PAP2 superfamily
KY997_14800	PF00005	ABC transporter
KY997_14805	PF00512	His Kinase A (phospho-acceptor) domain
KY997_14805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_14810	PF00072	Response regulator receiver domain
KY997_14810	PF00486	Transcriptional regulatory protein, C terminal
KY997_14830	PF00975	Thioesterase domain
KY997_14850	PF00106	short chain dehydrogenase
KY997_14855	PF00753	Metallo-beta-lactamase superfamily
KY997_14860	PF03807	NADP oxidoreductase coenzyme F420-dependent
KY997_14860	PF14748	Pyrroline-5-carboxylate reductase dimerisation
KY997_14870	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
KY997_14880	PF00471	Ribosomal protein L33
KY997_14905	PF16868	NMT1-like family
KY997_14910	PF00392	Bacterial regulatory proteins, gntR family
KY997_14910	PF07702	UTRA domain
KY997_14915	PF00232	Glycosyl hydrolase family 1
KY997_14920	PF02378	Phosphotransferase system, EIIC 
KY997_14925	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
KY997_14930	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_14945	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
KY997_14945	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
KY997_14950	PF11798	IMS family HHH motif
KY997_14950	PF11799	impB/mucB/samB family C-terminal domain
KY997_14950	PF00817	impB/mucB/samB family
KY997_14960	PF02096	60Kd inner membrane protein
KY997_14980	PF06081	Aromatic acid exporter family member 1
KY997_14980	PF11728	Putative aromatic acid exporter C-terminal domain
KY997_15000	PF06491	Disulphide isomerase
KY997_15005	PF00781	Diacylglycerol kinase catalytic domain
KY997_15010	PF02817	e3 binding domain
KY997_15010	PF00198	2-oxoacid dehydrogenases acyltransferase (catalytic domain)
KY997_15010	PF00364	Biotin-requiring enzyme
KY997_15015	PF02780	Transketolase, C-terminal domain
KY997_15015	PF02779	Transketolase, pyrimidine binding domain
KY997_15020	PF00676	Dehydrogenase E1 component
KY997_15025	PF02852	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
KY997_15025	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_15030	PF00871	Acetokinase family
KY997_15035	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
KY997_15035	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
KY997_15040	PF01515	Phosphate acetyl/butaryl transferase
KY997_15050	PF11118	Protein of unknown function (DUF2627)
KY997_15055	PF03009	Glycerophosphoryl diester phosphodiesterase family
KY997_15060	PF01520	N-acetylmuramoyl-L-alanine amidase
KY997_15080	PF00072	Response regulator receiver domain
KY997_15080	PF08769	Sporulation initiation factor Spo0A C terminal
KY997_15085	PF17820	PDZ domain
KY997_15085	PF05580	SpoIVB peptidase S55
KY997_15090	PF13476	AAA domain
KY997_15095	PF01316	Arginine repressor, DNA binding domain
KY997_15095	PF02863	Arginine repressor, C-terminal domain
KY997_15100	PF01728	FtsJ-like methyltransferase
KY997_15100	PF01479	S4 domain
KY997_15110	PF00348	Polyprenyl synthetase
KY997_15115	PF02609	Exonuclease VII small subunit
KY997_15130	PF01029	NusB family
KY997_15135	PF03780	Asp23 family, cell envelope-related function
KY997_15140	PF02785	Biotin carboxylase C-terminal domain
KY997_15140	PF00289	Biotin carboxylase, N-terminal domain
KY997_15140	PF02786	Carbamoyl-phosphate synthase L chain, ATP binding domain
KY997_15145	PF00364	Biotin-requiring enzyme
KY997_15150	PF12685	SpoIIIAH-like protein
KY997_15165	PF09546	Stage III sporulation protein AE (spore_III_AE)
KY997_15170	PF06686	Stage III sporulation protein AC/AD protein family
KY997_15175	PF06686	Stage III sporulation protein AC/AD protein family
KY997_15180	PF09548	Stage III sporulation protein AB (spore_III_AB)
KY997_15190	PF10942	Protein of unknown function (DUF2619)
KY997_15200	PF00557	Metallopeptidase family M24
KY997_15200	PF01321	Creatinase/Prolidase N-terminal domain
KY997_15205	PF01220	Dehydroquinase class II
KY997_15210	PF11085	Conserved membrane protein YqhR
KY997_15215	PF07136	Protein of unknown function (DUF1385)
KY997_15230	PF02742	Iron dependent repressor, metal binding and dimerisation domain
KY997_15230	PF01325	Iron dependent repressor, N-terminal DNA binding domain
KY997_15235	PF03099	Biotin/lipoate A/B protein ligase family
KY997_15240	PF00581	Rhodanese-like domain
KY997_15245	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
KY997_15250	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_15260	PF02347	Glycine cleavage system P-protein
KY997_15270	PF01571	Aminomethyltransferase folate-binding domain
KY997_15270	PF08669	Glycine cleavage T-protein C-terminal barrel domain
KY997_15280	PF11079	Bacterial protein YqhG of unknown function
KY997_15285	PF08671	Anti-repressor SinI
KY997_15290	PF08671	Anti-repressor SinI
KY997_15290	PF01381	Helix-turn-helix
KY997_15295	PF12389	Camelysin metallo-endopeptidase
KY997_15310	PF13028	Protein of unknown function (DUF3889)
KY997_15315	PF14038	YqzE-like protein
KY997_15325	PF15980	Putative Competence protein ComGF
KY997_15340	PF07963	Prokaryotic N-terminal methylation motif
KY997_15345	PF00482	Type II secretion system (T2SS), protein F
KY997_15350	PF00437	Type II/IV secretion system protein
KY997_15355	PF14361	RsbT co-antagonist protein rsbRD N-terminal domain
KY997_15355	PF01740	STAS domain
KY997_15365	PF03960	ArsC family
KY997_15370	PF11117	Protein of unknown function (DUF2626)
KY997_15380	PF10958	Protein of unknown function (DUF2759)
KY997_15385	PF01910	Thiamine-binding protein
KY997_15400	PF01497	Periplasmic binding protein
KY997_15405	PF00884	Sulfatase
KY997_15410	PF00480	ROK family
KY997_15415	PF06014	Bacterial protein of unknown function (DUF910)
KY997_15435	PF01812	5-formyltetrahydrofolate cyclo-ligase family
KY997_15440	PF00471	Ribosomal protein L33
KY997_15480	PF00005	ABC transporter
KY997_15525	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_15530	PF12849	PBP superfamily domain
KY997_15545	PF02777	Iron/manganese superoxide dismutases, C-terminal domain
KY997_15545	PF00081	Iron/manganese superoxide dismutases, alpha-hairpin domain
KY997_15550	PF04306	Protein of unknown function (DUF456)
KY997_15555	PF06691	Protein of unknown function (DUF1189)
KY997_15580	PF01475	Ferric uptake regulator family
KY997_15595	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_15595	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_15600	PF11116	Protein of unknown function (DUF2624)
KY997_15605	PF01261	Xylose isomerase-like TIM barrel
KY997_15620	PF02401	LytB protein
KY997_15625	PF01784	NIF3 (NGG1p interacting factor 3)
KY997_15630	PF04816	tRNA (adenine(22)-N(1))-methyltransferase
KY997_15635	PF04493	Endonuclease V
KY997_15670	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
KY997_15685	PF10410	DnaB-helicase binding domain of primase
KY997_15685	PF08275	DNA primase catalytic core, N-terminal domain
KY997_15685	PF01807	CHC2 zinc finger
KY997_15690	PF02639	Uncharacterized BCR, YaiI/YqxD family COG1671
KY997_15700	PF00571	CBS domain
KY997_15700	PF08279	HTH domain
KY997_15710	PF02091	Glycyl-tRNA synthetase alpha subunit
KY997_15715	PF11967	Recombination protein O N terminal
KY997_15715	PF02565	Recombination protein O C terminal
KY997_15720	PF14006	YqzL-like protein
KY997_15725	PF07650	KH domain
KY997_15725	PF01926	50S ribosome-binding GTPase
KY997_15730	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
KY997_15735	PF01219	Prokaryotic diacylglycerol kinase
KY997_15740	PF02130	Uncharacterized protein family UPF0054
KY997_15770	PF12127	SigmaW regulon antibacterial
KY997_15785	PF01165	Ribosomal protein S21
KY997_15805	PF04452	RNA methyltransferase
KY997_15815	PF01556	DnaJ C terminal domain
KY997_15815	PF00226	DnaJ domain
KY997_15815	PF00684	DnaJ central domain
KY997_15825	PF01025	GrpE
KY997_15840	PF00679	Elongation factor G C-terminus
KY997_15840	PF03144	Elongation factor Tu domain 2
KY997_15840	PF06421	GTP-binding protein LepA C-terminus
KY997_15840	PF00009	Elongation factor Tu GTP binding domain
KY997_15855	PF03418	Germination protease
KY997_15860	PF01649	Ribosomal protein S20
KY997_15875	PF14141	YqzM-like protein
KY997_15885	PF00383	Cytidine and deoxycytidylate deaminase zinc-binding region
KY997_15895	PF03807	NADP oxidoreductase coenzyme F420-dependent
KY997_15895	PF14748	Pyrroline-5-carboxylate reductase dimerisation
KY997_15900	PF13649	Methyltransferase domain
KY997_15910	PF01966	HD domain
KY997_15920	PF01985	CRS1 / YhbY (CRM) domain
KY997_15925	PF08501	Shikimate dehydrogenase substrate binding domain
KY997_15925	PF18317	Shikimate 5'-dehydrogenase C-terminal domain
KY997_15925	PF01488	Shikimate / quinate 5-dehydrogenase
KY997_15930	PF01926	50S ribosome-binding GTPase
KY997_15940	PF08970	Sporulation inhibitor A
KY997_15950	PF00657	GDSL-like Lipase/Acylhydrolase
KY997_15960	PF10057	Uncharacterized conserved protein (DUF2294)
KY997_15965	PF10588	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
KY997_15965	PF04879	Molybdopterin oxidoreductase Fe4S4 domain
KY997_15965	PF00384	Molybdopterin oxidoreductase
KY997_15965	PF00037	4Fe-4S binding domain
KY997_15965	PF01568	Molydopterin dinucleotide binding domain
KY997_15970	PF07849	Protein of unknown function (DUF1641)
KY997_15980	PF04542	Sigma-70 region 2 
KY997_15980	PF04545	Sigma-70, region 4
KY997_15995	PF01042	Endoribonuclease L-PSP
KY997_16005	PF00291	Pyridoxal-phosphate dependent enzyme
KY997_16010	PF01042	Endoribonuclease L-PSP
KY997_16020	PF04545	Sigma-70, region 4
KY997_16020	PF04542	Sigma-70 region 2 
KY997_16025	PF00583	Acetyltransferase (GNAT) family
KY997_16045	PF00381	PTS HPr component phosphorylation site
KY997_16055	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
KY997_16060	PF02378	Phosphotransferase system, EIIC 
KY997_16070	PF02665	Nitrate reductase gamma subunit
KY997_16075	PF02613	Nitrate reductase delta subunit
KY997_16085	PF00384	Molybdopterin oxidoreductase
KY997_16085	PF14710	Respiratory nitrate reductase alpha N-terminal
KY997_16085	PF01568	Molydopterin dinucleotide binding domain
KY997_16090	PF07690	Major Facilitator Superfamily
KY997_16105	PF00753	Metallo-beta-lactamase superfamily
KY997_16115	PF00072	Response regulator receiver domain
KY997_16115	PF00196	Bacterial regulatory proteins, luxR family
KY997_16125	PF00085	Thioredoxin
KY997_16130	PF01925	Sulfite exporter TauE/SafE
KY997_16135	PF01206	Sulfurtransferase TusA
KY997_16140	PF00581	Rhodanese-like domain
KY997_16140	PF00753	Metallo-beta-lactamase superfamily
KY997_16145	PF00581	Rhodanese-like domain
KY997_16145	PF00753	Metallo-beta-lactamase superfamily
KY997_16150	PF13686	DsrE/DsrF/DrsH-like family
KY997_16155	PF00581	Rhodanese-like domain
KY997_16155	PF01206	Sulfurtransferase TusA
KY997_16160	PF00581	Rhodanese-like domain
KY997_16160	PF12368	Rhodanase C-terminal
KY997_16160	PF17773	UPF0176 acylphosphatase like domain
KY997_16170	PF02583	Metal-sensitive transcriptional repressor
KY997_16200	PF14552	Tautomerase enzyme
KY997_16205	PF01380	SIS domain
KY997_16210	PF00215	Orotidine 5'-phosphate decarboxylase / HUMPS family
KY997_16230	PF00196	Bacterial regulatory proteins, luxR family
KY997_16230	PF00072	Response regulator receiver domain
KY997_16240	PF00496	Bacterial extracellular solute-binding proteins, family 5 Middle
KY997_16250	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_16255	PF00005	ABC transporter
KY997_16255	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_16260	PF00005	ABC transporter
KY997_16260	PF08352	Oligopeptide/dipeptide transporter, C-terminal region
KY997_16275	PF12833	Helix-turn-helix domain
KY997_16275	PF12625	Arabinose-binding domain of AraC transcription regulator, N-term
KY997_16280	PF00106	short chain dehydrogenase
KY997_16290	PF06445	GyrI-like small molecule binding domain
KY997_16325	PF00106	short chain dehydrogenase
KY997_16330	PF08244	Glycosyl hydrolases family 32 C terminal
KY997_16330	PF00251	Glycosyl hydrolases family 32 N-terminal domain
KY997_16335	PF03613	PTS system mannose/fructose/sorbose family IID component
KY997_16340	PF03609	PTS system sorbose-specific iic component
KY997_16345	PF03830	PTS system sorbose subfamily IIB component
KY997_16365	PF14145	YrhK-like protein
KY997_16370	PF00302	Chloramphenicol acetyltransferase
KY997_16375	PF02805	Metal binding domain of Ada
KY997_16375	PF12833	Helix-turn-helix domain
KY997_16380	PF02870	6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
KY997_16380	PF01035	6-O-methylguanine DNA methyltransferase, DNA binding domain
KY997_16390	PF02669	K+-transporting ATPase, c chain
KY997_16410	PF00248	Aldo/keto reductase family
KY997_16420	PF01638	HxlR-like helix-turn-helix
KY997_16430	PF02602	Uroporphyrinogen-III synthase HemD
KY997_16440	PF01497	Periplasmic binding protein
KY997_16445	PF03466	LysR substrate binding domain
KY997_16445	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_16450	PF07690	Major Facilitator Superfamily
KY997_16465	PF00440	Bacterial regulatory proteins, tetR family
KY997_16465	PF16295	Tetracyclin repressor-like, C-terminal domain
KY997_16480	PF08241	Methyltransferase domain
KY997_16495	PF09501	Probable sporulation protein (Bac_small_yrzI)
KY997_16500	PF14143	YrhC-like protein
KY997_16505	PF01053	Cys/Met metabolism PLP-dependent enzyme
KY997_16510	PF00291	Pyridoxal-phosphate dependent enzyme
KY997_16515	PF01048	Phosphorylase superfamily
KY997_16520	PF13649	Methyltransferase domain
KY997_16530	PF07423	Domain of unknown function (DUF1510)
KY997_16540	PF03449	Transcription elongation factor, N-terminal
KY997_16540	PF01272	Transcription elongation factor, GreA/GreB, C-term
KY997_16545	PF00485	Phosphoribulokinase / Uridine kinase family
KY997_16555	PF01136	Peptidase family U32
KY997_16560	PF01596	O-methyltransferase
KY997_16565	PF02618	YceG-like family
KY997_16580	PF06135	IreB regulatory phosphoprotein
KY997_16590	PF01594	AI-2E family transporter
KY997_16595	PF13056	Protein of unknown function (DUF3918)
KY997_16605	PF05239	PRC-barrel domain
KY997_16615	PF13181	Tetratricopeptide repeat
KY997_16615	PF07719	Tetratricopeptide repeat
KY997_16625	PF00266	Aminotransferase class-V
KY997_16630	PF02082	Transcriptional regulator
KY997_16640	PF00899	ThiF family
KY997_16655	PF03129	Anticodon binding domain
KY997_16655	PF13393	Histidyl-tRNA synthetase
KY997_16680	PF00156	Phosphoribosyl transferase domain
KY997_16685	PF01368	DHH family
KY997_16685	PF02272	DHHA1 domain
KY997_16685	PF17768	RecJ OB domain
KY997_16685	PF10141	Single-strand DNA-specific exonuclease, C terminal domain
KY997_16690	PF06305	Lipopolysaccharide assembly protein A domain
KY997_16700	PF13797	Post-transcriptional regulator
KY997_16710	PF04239	Protein of unknown function (DUF421)
KY997_16720	PF02699	Preprotein translocase subunit
KY997_16730	PF02547	Queuosine biosynthesis protein
KY997_16735	PF11146	Protein of unknown function (DUF2905)
KY997_16740	PF05496	Holliday junction DNA helicase RuvB P-loop domain
KY997_16740	PF05491	RuvB C-terminal winged helix domain
KY997_16740	PF17864	RuvB AAA lid domain
KY997_16745	PF01330	RuvA N terminal domain
KY997_16745	PF07499	RuvA, C-terminal domain
KY997_16750	PF08977	Bypass of Forespore C, N terminal
KY997_16750	PF08955	BofC C-terminal domain
KY997_16760	PF08141	Small acid-soluble spore protein H family
KY997_16765	PF05163	DinB family
KY997_16770	PF05908	Poly-gamma-glutamate hydrolase
KY997_16785	PF01709	Transcriptional regulator
KY997_16790	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
KY997_16795	PF01476	LysM domain
KY997_16815	PF00266	Aminotransferase class-V
KY997_16820	PF02829	3H domain
KY997_16820	PF08279	HTH domain
KY997_16835	PF09269	Domain of unknown function (DUF1967)
KY997_16835	PF01018	GTP1/OBG
KY997_16835	PF01926	50S ribosome-binding GTPase
KY997_16840	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
KY997_16840	PF14682	Sporulation initiation phospho-transferase B, C-terminal
KY997_16845	PF01016	Ribosomal L27 protein
KY997_16850	PF04327	Cysteine protease Prp
KY997_16855	PF00829	Ribosomal prokaryotic L21 protein
KY997_16860	PF02163	Peptidase family M50
KY997_16865	PF01551	Peptidase family M23
KY997_16870	PF08327	Activator of Hsp90 ATPase homolog 1-like protein
KY997_16875	PF01022	Bacterial regulatory protein, arsR family
KY997_16880	PF01656	CobQ/CobB/MinD/ParA nucleotide binding domain
KY997_16885	PF03775	Septum formation inhibitor MinC, C-terminal domain
KY997_16890	PF04093	rod shape-determining protein MreD
KY997_16895	PF04085	rod shape-determining protein MreC
KY997_16905	PF04002	RadC-like JAB domain
KY997_16910	PF02545	Maf-like protein
KY997_16915	PF00665	Integrase core domain
KY997_16915	PF13333	Integrase core domain
KY997_16920	PF05036	Sporulation related domain
KY997_16930	PF02875	Mur ligase family, glutamate ligase domain
KY997_16930	PF08245	Mur ligase middle domain
KY997_16935	PF08264	Anticodon-binding domain of tRNA
KY997_16935	PF00133	tRNA synthetases class I (I, L, M and V)
KY997_16935	PF10458	Valyl tRNA synthetase tRNA binding arm
KY997_16950	PF01476	LysM domain
KY997_16955	PF00202	Aminotransferase class-III
KY997_16960	PF00490	Delta-aminolevulinic acid dehydratase
KY997_16970	PF03900	Porphobilinogen deaminase, C-terminal domain
KY997_16970	PF01379	Porphobilinogen deaminase, dipyromethane cofactor binding domain
KY997_16975	PF01578	Cytochrome C assembly protein
KY997_16990	PF01926	50S ribosome-binding GTPase
KY997_16995	PF02190	ATP-dependent protease La (LON) substrate-binding domain 
KY997_16995	PF05362	Lon protease (S16) C-terminal proteolytic domain
KY997_16995	PF00004	ATPase family associated with various cellular activities (AAA)
KY997_17005	PF10431	C-terminal, D2-small domain, of ClpB protein 
KY997_17005	PF06689	ClpX C4-type zinc finger
KY997_17005	PF07724	AAA domain (Cdc48 subfamily)
KY997_17010	PF05697	Bacterial trigger factor protein (TF)
KY997_17010	PF05698	Bacterial trigger factor protein (TF) C-terminus
KY997_17010	PF00254	FKBP-type peptidyl-prolyl cis-trans isomerase
KY997_17020	PF00694	Aconitase C-terminal domain
KY997_17030	PF00180	Isocitrate/isopropylmalate dehydrogenase
KY997_17035	PF00682	HMGL-like
KY997_17035	PF08502	LeuA allosteric (dimerisation) domain
KY997_17040	PF01450	Acetohydroxy acid isomeroreductase, catalytic domain
KY997_17040	PF07991	Acetohydroxy acid isomeroreductase, NADPH-binding domain
KY997_17045	PF01842	ACT domain
KY997_17045	PF10369	Small subunit of acetolactate synthase
KY997_17050	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
KY997_17050	PF00205	Thiamine pyrophosphate enzyme, central domain
KY997_17050	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
KY997_17055	PF01063	Amino-transferase class IV
KY997_17065	PF00208	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
KY997_17065	PF02812	Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
KY997_17090	PF01725	Ham1 family
KY997_17100	PF10646	Sporulation and spore germination
KY997_17110	PF01047	MarR family
KY997_17115	PF00196	Bacterial regulatory proteins, luxR family
KY997_17120	PF00106	short chain dehydrogenase
KY997_17125	PF03061	Thioesterase superfamily
KY997_17130	PF13183	4Fe-4S dicluster domain
KY997_17130	PF13085	2Fe-2S iron-sulfur cluster binding domain
KY997_17135	PF02910	Fumarate reductase flavoprotein C-term
KY997_17135	PF00890	FAD binding domain
KY997_17140	PF01127	Succinate dehydrogenase/Fumarate reductase transmembrane subunit
KY997_17155	PF02151	UvrB/uvrC motif
KY997_17155	PF08459	UvrC Helix-hairpin-helix N-terminal
KY997_17155	PF01541	GIY-YIG catalytic domain
KY997_17160	PF00085	Thioredoxin
KY997_17165	PF01012	Electron transfer flavoprotein domain
KY997_17165	PF00766	Electron transfer flavoprotein FAD-binding domain
KY997_17175	PF00378	Enoyl-CoA hydratase/isomerase
KY997_17180	PF08359	YsiA-like protein, C-terminal region
KY997_17180	PF00440	Bacterial regulatory proteins, tetR family
KY997_17185	PF13193	AMP-binding enzyme C-terminal domain
KY997_17185	PF00501	AMP-binding enzyme
KY997_17190	PF03994	Domain of Unknown Function (DUF350) 
KY997_17195	PF01713	Smr domain
KY997_17195	PF00488	MutS domain V
KY997_17205	PF02674	Colicin V production protein
KY997_17210	PF05164	Cell division protein ZapA
KY997_17230	PF03483	B3/4 domain
KY997_17230	PF03484	tRNA synthetase B5 domain
KY997_17230	PF03147	Ferredoxin-fold anticodon binding domain
KY997_17230	PF01588	Putative tRNA binding domain
KY997_17230	PF17759	Phenylalanyl tRNA synthetase beta chain CLM domain
KY997_17240	PF00588	SpoU rRNA Methylase family
KY997_17240	PF08032	RNA 2'-O ribose methyltransferase substrate binding
KY997_17245	PF14098	Small, acid-soluble spore protein I
KY997_17250	PF02554	Carbon starvation protein CstA
KY997_17250	PF13722	5TM C-terminal transporter carbon starvation CstA
KY997_17255	PF13977	BetI-type transcriptional repressor, C-terminal
KY997_17255	PF00440	Bacterial regulatory proteins, tetR family
KY997_17260	PF03703	Bacterial PH domain
KY997_17275	PF06964	Alpha-L-arabinofuranosidase C-terminal domain
KY997_17290	PF01547	Bacterial extracellular solute-binding protein
KY997_17295	PF13685	Iron-containing alcohol dehydrogenase
KY997_17300	PF00596	Class II Aldolase and Adducin N-terminal domain
KY997_17310	PF11762	L-arabinose isomerase C-terminal domain
KY997_17310	PF02610	L-arabinose isomerase
KY997_17315	PF04616	Glycosyl hydrolases family 43
KY997_17330	PF06961	Protein of unknown function (DUF1294)
KY997_17335	PF00453	Ribosomal protein L20
KY997_17340	PF01632	Ribosomal protein L35
KY997_17345	PF00707	Translation initiation factor IF-3, C-terminal domain
KY997_17345	PF05198	Translation initiation factor IF-3, N-terminal domain
KY997_17350	PF04172	LrgB-like family 
KY997_17355	PF03788	LrgA family
KY997_17365	PF00072	Response regulator receiver domain
KY997_17365	PF04397	LytTr DNA-binding domain
KY997_17380	PF13419	Haloacid dehalogenase-like hydrolase
KY997_17385	PF03129	Anticodon binding domain
KY997_17385	PF02824	TGS domain
KY997_17385	PF00587	tRNA synthetase class II core domain (G, H, P, S and T)
KY997_17385	PF07973	Threonyl and Alanyl tRNA synthetase second additional domain
KY997_17390	PF08812	YtxC-like family
KY997_17405	PF07261	Replication initiation and membrane attachment
KY997_17410	PF03477	ATP cone domain
KY997_17420	PF02675	S-adenosylmethionine decarboxylase 
KY997_17425	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
KY997_17425	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
KY997_17430	PF00544	Pectate lyase
KY997_17435	PF01121	Dephospho-CoA kinase
KY997_17440	PF02659	Putative manganese efflux pump
KY997_17445	PF06827	Zinc finger found in FPG and IleRS
KY997_17445	PF06831	Formamidopyrimidine-DNA glycosylase H2TH domain
KY997_17445	PF01149	Formamidopyrimidine-DNA glycosylase N-terminal domain
KY997_17470	PF00180	Isocitrate/isopropylmalate dehydrogenase
KY997_17480	PF00722	Glycosyl hydrolases family 16
KY997_17490	PF04284	Protein of unknown function (DUF441)
KY997_17500	PF04186	FxsA cytoplasmic membrane protein 
KY997_17510	PF00365	Phosphofructokinase
KY997_17525	PF00390	Malic enzyme, N-terminal domain
KY997_17525	PF03949	Malic enzyme, NAD binding domain
KY997_17535	PF14034	Sporulation protein YtrH
KY997_17550	PF01368	DHH family
KY997_17550	PF02272	DHHA1 domain
KY997_17555	PF14007	YtpI-like protein
KY997_17560	PF03061	Thioesterase superfamily
KY997_17560	PF00571	CBS domain
KY997_17560	PF00392	Bacterial regulatory proteins, gntR family
KY997_17560	PF07085	DRTGG domain
KY997_17590	PF00764	Arginosuccinate synthase
KY997_17600	PF00871	Acetokinase family
KY997_17605	PF02384	N-6 DNA Methylase
KY997_17610	PF08534	Redoxin
KY997_17625	PF06271	RDD family
KY997_17635	PF01513	ATP-NAD kinase
KY997_17640	PF01047	MarR family
KY997_17645	PF13193	AMP-binding enzyme C-terminal domain
KY997_17645	PF00501	AMP-binding enzyme
KY997_17650	PF00269	Small, acid-soluble spore proteins, alpha/beta type
KY997_17655	PF02926	THUMP domain
KY997_17655	PF02568	Thiamine biosynthesis protein (ThiI)
KY997_17665	PF05525	Branched-chain amino acid transport protein
KY997_17670	PF06160	Septation ring formation regulator, EzrA 
KY997_17675	PF02811	PHP domain
KY997_17680	PF00440	Bacterial regulatory proteins, tetR family
KY997_17695	PF00163	Ribosomal protein S4/S9 N-terminal domain
KY997_17695	PF01479	S4 domain
KY997_17715	PF00501	AMP-binding enzyme
KY997_17715	PF13193	AMP-binding enzyme C-terminal domain
KY997_17720	PF00583	Acetyltransferase (GNAT) family
KY997_17725	PF00571	CBS domain
KY997_17735	PF13677	Membrane MotB of proton-channel complex MotA/MotB 
KY997_17735	PF00691	OmpA family
KY997_17750	PF01817	Chorismate mutase type II
KY997_17750	PF00793	DAHP synthetase I family
KY997_17760	PF11009	Protein of unknown function (DUF2847)
KY997_17765	PF12732	YtxH-like protein
KY997_17770	PF06103	Bacterial protein of unknown function (DUF948)
KY997_17775	PF01225	Mur ligase family, catalytic domain
KY997_17775	PF02875	Mur ligase family, glutamate ligase domain
KY997_17775	PF08245	Mur ligase middle domain
KY997_17780	PF09397	Ftsk gamma domain
KY997_17780	PF01580	FtsK/SpoIIIE family
KY997_17780	PF17854	FtsK alpha domain
KY997_17785	PF14794	Domain of unknown function (DUF4479)
KY997_17785	PF01588	Putative tRNA binding domain
KY997_17795	PF00085	Thioredoxin
KY997_17800	PF11071	Nucleoside 2-deoxyribosyltransferase YtoQ
KY997_17805	PF05343	M42 glutamyl aminopeptidase
KY997_17810	PF03413	Peptidase propeptide and YPEB domain
KY997_17820	PF00753	Metallo-beta-lactamase superfamily
KY997_17825	PF02390	Putative methyltransferase 
KY997_17830	PF14165	YtzH-like protein
KY997_17860	PF00291	Pyridoxal-phosphate dependent enzyme
KY997_17880	PF00860	Permease family
KY997_17890	PF05975	Bacterial ABC transporter protein EcsB
KY997_17895	PF00005	ABC transporter
KY997_17900	PF08220	DeoR-like helix-turn-helix domain
KY997_17910	PF14667	Polysaccharide biosynthesis C-terminal domain
KY997_17910	PF01943	Polysaccharide biosynthesis protein
KY997_17920	PF02028	BCCT, betaine/carnitine/choline family transporter
KY997_17925	PF10957	Sporulation protein Cse60 
KY997_17930	PF00581	Rhodanese-like domain
KY997_17950	PF04854	Protein of unknown function, DUF624
KY997_17955	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_17955	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_17985	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_17990	PF01370	NAD dependent epimerase/dehydratase family
KY997_17995	PF01738	Dienelactone hydrolase family
KY997_18005	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_18005	PF03466	LysR substrate binding domain
KY997_18010	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_18020	PF14074	Protein of unknown function (DUF4257)
KY997_18025	PF07690	Major Facilitator Superfamily
KY997_18030	PF03180	NLPA lipoprotein
KY997_18045	PF00005	ABC transporter
KY997_18060	PF00392	Bacterial regulatory proteins, gntR family
KY997_18065	PF10732	Protein of unknown function (DUF2524)
KY997_18070	PF04055	Radical SAM superfamily
KY997_18070	PF16199	Radical_SAM C-terminal domain
KY997_18075	PF06962	Putative rRNA methylase
KY997_18080	PF10776	Protein of unknown function (DUF2600)
KY997_18085	PF12146	Serine aminopeptidase, S33
KY997_18090	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_18095	PF01569	PAP2 superfamily
KY997_18100	PF00534	Glycosyl transferases group 1
KY997_18100	PF13439	Glycosyltransferase Family 4
KY997_18105	PF00733	Asparagine synthase
KY997_18105	PF13537	Glutamine amidotransferase domain
KY997_18110	PF02773	S-adenosylmethionine synthetase, C-terminal domain
KY997_18110	PF02772	S-adenosylmethionine synthetase, central domain
KY997_18110	PF00438	S-adenosylmethionine synthetase, N-terminal domain
KY997_18125	PF10763	Protein of unknown function (DUF2584)
KY997_18130	PF00326	Prolyl oligopeptidase family
KY997_18145	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_18150	PF00293	NUDIX domain
KY997_18160	PF05105	Bacteriophage holin family 
KY997_18165	PF00210	Ferritin-like domain
KY997_18175	PF13115	YtkA-like
KY997_18180	PF02664	S-Ribosylhomocysteinase (LuxS)
KY997_18185	PF01809	Putative membrane protein insertion efficiency factor
KY997_18190	PF00484	Carbonic anhydrase
KY997_18205	PF01197	Ribosomal protein L31
KY997_18210	PF01654	Cytochrome bd terminal oxidase subunit I
KY997_18215	PF02322	Cytochrome bd terminal oxidase subunit II
KY997_18220	PF07561	Domain of Unknown Function (DUF1540)
KY997_18235	PF00501	AMP-binding enzyme
KY997_18235	PF13193	AMP-binding enzyme C-terminal domain
KY997_18240	PF00378	Enoyl-CoA hydratase/isomerase
KY997_18245	PF00561	alpha/beta hydrolase fold
KY997_18260	PF01040	UbiA prenyltransferase family
KY997_18270	PF00343	Carbohydrate phosphorylase
KY997_18280	PF00483	Nucleotidyl transferase
KY997_18415	PF09515	Thiamine transporter protein (Thia_YuaJ)
KY997_18420	PF04203	Sortase domain
KY997_18435	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_18440	PF01470	Pyroglutamyl peptidase
KY997_18445	PF02080	TrkA-C domain
KY997_18445	PF02254	TrkA-N domain
KY997_18470	PF00465	Iron-containing alcohol dehydrogenase 
KY997_18490	PF04072	Leucine carboxyl methyltransferase
KY997_18510	PF03747	ADP-ribosylglycohydrolase
KY997_18540	PF13332	Hemagglutinin repeat
KY997_18540	PF05860	haemagglutination activity domain
KY997_18540	PF04829	Pre-toxin domain with VENN motif
KY997_18575	PF09855	Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082)
KY997_18600	PF00149	Calcineurin-like phosphoesterase
KY997_18605	PF02673	Bacitracin resistance protein BacA
KY997_18610	PF01594	AI-2E family transporter
KY997_18615	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_18615	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_18620	PF01965	DJ-1/PfpI family
KY997_18630	PF02743	Cache domain
KY997_18630	PF00672	HAMP domain
KY997_18630	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_18635	PF02743	Cache domain
KY997_18635	PF00672	HAMP domain
KY997_18635	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_18645	PF03060	Nitronate monooxygenase
KY997_18650	PF01894	Uncharacterised protein family UPF0047
KY997_18670	PF01670	Glycosyl hydrolase family 12
KY997_18675	PF01595	Cyclin M transmembrane N-terminal domain
KY997_18675	PF00571	CBS domain
KY997_18675	PF03471	Transporter associated domain
KY997_18680	PF04298	Putative neutral zinc metallopeptidase
KY997_18690	PF11458	Membrane-integrating protein Mistic
KY997_18695	PF07885	Ion channel
KY997_18695	PF02254	TrkA-N domain
KY997_18700	PF08868	YugN-like family
KY997_18705	PF04239	Protein of unknown function (DUF421)
KY997_18710	PF03073	TspO/MBR family
KY997_18715	PF13302	Acetyltransferase (GNAT) domain
KY997_18720	PF00342	Phosphoglucose isomerase
KY997_18725	PF00465	Iron-containing alcohol dehydrogenase 
KY997_18730	PF04070	Domain of unknown function (DUF378)
KY997_18735	PF00575	S1 RNA binding domain
KY997_18745	PF01037	Lrp/AsnC ligand binding domain
KY997_18750	PF08386	TAP-like protein
KY997_18750	PF00561	alpha/beta hydrolase fold
KY997_18755	PF08958	Domain of unknown function (DUF1871)
KY997_18780	PF00929	Exonuclease
KY997_18785	PF07690	Major Facilitator Superfamily
KY997_18805	PF00989	PAS fold
KY997_18805	PF17203	Single cache domain 3
KY997_18805	PF14689	Sensor_kinase_SpoOB-type, alpha-helical domain
KY997_18805	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_18810	PF00072	Response regulator receiver domain
KY997_18815	PF02653	Branched-chain amino acid transport system / permease component
KY997_18820	PF01066	CDP-alcohol phosphatidyltransferase
KY997_18825	PF09335	SNARE associated Golgi protein
KY997_18830	PF02666	Phosphatidylserine decarboxylase
KY997_18835	PF03390	2-hydroxycarboxylate transporter family
KY997_18845	PF04039	Domain related to MnhB subunit of Na+/H+ antiporter
KY997_18855	PF00361	Proton-conducting membrane transporter
KY997_18860	PF01899	Na+/H+ ion antiporter subunit
KY997_18865	PF04066	Multiple resistance and pH regulation protein F (MrpF / PhaF)
KY997_18870	PF03334	Na+/H+ antiporter subunit
KY997_18875	PF03061	Thioesterase superfamily
KY997_18900	PF08181	DegQ (SacQ) family
KY997_18915	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
KY997_18915	PF17956	Nicotinate phosphoribosyltransferase C-terminal domain
KY997_18915	PF17767	Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain
KY997_18920	PF00857	Isochorismatase family
KY997_18925	PF07997	Protein of unknown function (DUF1694)
KY997_18930	PF14166	YueH-like protein
KY997_18945	PF02082	Transcriptional regulator
KY997_18960	PF01966	HD domain
KY997_18995	PF08817	WXG100 protein secretion system (Wss), protein YukD
KY997_19000	PF06013	Proteins of 100 residues with WXG
KY997_19005	PF01235	Sodium:alanine symporter family
KY997_19010	PF13556	PucR C-terminal helix-turn-helix domain
KY997_19010	PF17853	GGDEF-like domain
KY997_19010	PF06018	CodY GAF-like domain
KY997_19025	PF00174	Oxidoreductase molybdopterin binding domain
KY997_19030	PF02632	BioY family
KY997_19045	PF02681	Divergent PAP2 family
KY997_19050	PF06725	3D domain
KY997_19060	PF17302	Family of unknown function (DUF5351)
KY997_19070	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_19080	PF14169	Cold-inducible protein YdjO
KY997_19085	PF00583	Acetyltransferase (GNAT) family
KY997_19090	PF01521	Iron-sulphur cluster biosynthesis
KY997_19095	PF01678	Diaminopimelate epimerase
KY997_19100	PF07662	Na+ dependent nucleoside transporter C-terminus
KY997_19100	PF01773	Na+ dependent nucleoside transporter N-terminus
KY997_19105	PF07293	Protein of unknown function (DUF1450)
KY997_19115	PF04239	Protein of unknown function (DUF421)
KY997_19120	PF02915	Rubrerythrin
KY997_19125	PF08818	Domain of unknown function (DU1801)
KY997_19140	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_19145	PF05870	Phenolic acid decarboxylase (PAD)
KY997_19155	PF07315	Protein of unknown function (DUF1462)
KY997_19160	PF01106	NifU-like domain
KY997_19165	PF07676	WD40-like Beta Propeller Repeat
KY997_19165	PF00326	Prolyl oligopeptidase family
KY997_19170	PF08544	GHMP kinases C terminal 
KY997_19170	PF00288	GHMP kinases N terminal domain
KY997_19175	PF00291	Pyridoxal-phosphate dependent enzyme
KY997_19180	PF01842	ACT domain
KY997_19180	PF00742	Homoserine dehydrogenase
KY997_19180	PF03447	Homoserine dehydrogenase, NAD binding domain
KY997_19195	PF04608	Phosphatidylglycerophosphatase A
KY997_19200	PF13344	Haloacid dehalogenase-like hydrolase
KY997_19205	PF01934	Protein of unknown function DUF86
KY997_19210	PF06265	Protein of unknown function (DUF1027)
KY997_19215	PF09580	Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
KY997_19225	PF01551	Peptidase family M23
KY997_19240	PF00209	Sodium:neurotransmitter symporter family
KY997_19245	PF09560	Sporulation protein YunB (Spo_YunB)
KY997_19250	PF08827	Domain of unknown function (DUF1805)
KY997_19255	PF02872	5'-nucleotidase, C-terminal domain
KY997_19260	PF01925	Sulfite exporter TauE/SafE
KY997_19265	PF01904	Protein of unknown function DUF72
KY997_19275	PF00440	Bacterial regulatory proteins, tetR family
KY997_19275	PF13977	BetI-type transcriptional repressor, C-terminal
KY997_19280	PF00266	Aminotransferase class-V
KY997_19295	PF03606	C4-dicarboxylate anaerobic carrier
KY997_19300	PF02885	Glycosyl transferase family, helical bundle domain
KY997_19300	PF00591	Glycosyl transferase family, a/b domain
KY997_19320	PF01266	FAD dependent oxidoreductase
KY997_19335	PF18801	response regulator aspartate phosphatase H, N terminal
KY997_19345	PF01458	Uncharacterized protein family (UPF0051)
KY997_19350	PF01592	NifU-like N terminal domain
KY997_19355	PF00266	Aminotransferase class-V
KY997_19360	PF01458	Uncharacterized protein family (UPF0051)
KY997_19365	PF00005	ABC transporter
KY997_19370	PF16916	Dimerisation domain of Zinc Transporter
KY997_19370	PF01545	Cation efflux family
KY997_19375	PF02627	Carboxymuconolactone decarboxylase family
KY997_19380	PF03180	NLPA lipoprotein
KY997_19385	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_19390	PF00005	ABC transporter
KY997_19390	PF09383	NIL domain
KY997_19395	PF02036	SCP-2 sterol transfer family
KY997_19400	PF00085	Thioredoxin
KY997_19410	PF10830	Protein of unknown function (DUF2553)
KY997_19415	PF01597	Glycine cleavage H-protein
KY997_19420	PF03960	ArsC family
KY997_19430	PF02803	Thiolase, C-terminal domain
KY997_19430	PF00108	Thiolase, N-terminal domain
KY997_19440	PF14115	YuzL-like protein
KY997_19450	PF07875	Coat F domain
KY997_19465	PF00005	ABC transporter
KY997_19470	PF01032	FecCD transport family
KY997_19480	PF01497	Periplasmic binding protein
KY997_19485	PF14039	YusW-like protein
KY997_19495	PF07943	Penicillin-binding protein 5, C-terminal domain
KY997_19495	PF00768	D-alanyl-D-alanine carboxypeptidase
KY997_19500	PF00106	short chain dehydrogenase
KY997_19505	PF00210	Ferritin-like domain
KY997_19510	PF13180	PDZ domain
KY997_19515	PF00486	Transcriptional regulatory protein, C terminal
KY997_19515	PF00072	Response regulator receiver domain
KY997_19520	PF00672	HAMP domain
KY997_19520	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_19520	PF00512	His Kinase A (phospho-acceptor) domain
KY997_19530	PF00440	Bacterial regulatory proteins, tetR family
KY997_19535	PF00206	Lyase
KY997_19535	PF10415	Fumarase C C-terminus
KY997_19540	PF13113	Protein of unknown function (DUF3970)
KY997_19550	PF03845	Spore germination protein
KY997_19555	PF05504	Spore germination B3/ GerAC like, C-terminal 
KY997_19565	PF00072	Response regulator receiver domain
KY997_19565	PF00196	Bacterial regulatory proteins, luxR family
KY997_19570	PF07730	Histidine kinase
KY997_19570	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_19570	PF00672	HAMP domain
KY997_19575	PF09922	Cell wall-active antibiotics response 4TMS YvqF
KY997_19580	PF13349	Putative adhesin
KY997_19585	PF04012	PspA/IM30 family
KY997_19595	PF01095	Pectinesterase
KY997_19600	PF01923	Cobalamin adenosyltransferase
KY997_19625	PF00465	Iron-containing alcohol dehydrogenase 
KY997_19655	PF00106	short chain dehydrogenase
KY997_19660	PF03475	3-alpha domain
KY997_19660	PF03473	MOSC domain
KY997_19665	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_19665	PF03466	LysR substrate binding domain
KY997_19670	PF00295	Glycosyl hydrolases family 28
KY997_19675	PF04295	D-galactarate dehydratase / Altronate hydrolase, C terminus
KY997_19675	PF08666	SAF domain
KY997_19680	PF01232	Mannitol dehydrogenase Rossmann domain
KY997_19680	PF08125	Mannitol dehydrogenase C-terminal domain
KY997_19685	PF00356	Bacterial regulatory proteins, lacI family
KY997_19695	PF02614	Glucuronate isomerase
KY997_19700	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_19700	PF00512	His Kinase A (phospho-acceptor) domain
KY997_19705	PF00486	Transcriptional regulatory protein, C terminal
KY997_19705	PF00072	Response regulator receiver domain
KY997_19710	PF00005	ABC transporter
KY997_19715	PF01032	FecCD transport family
KY997_19730	PF09575	Small spore protein J (Spore_SspJ)
KY997_19735	PF04307	LexA-binding, inner membrane-associated putative hydrolase
KY997_19740	PF00884	Sulfatase
KY997_19745	PF07690	Major Facilitator Superfamily
KY997_19750	PF00248	Aldo/keto reductase family
KY997_19760	PF00266	Aminotransferase class-V
KY997_19770	PF12697	Alpha/beta hydrolase family
KY997_19780	PF03458	UPF0126 domain
KY997_19790	PF00583	Acetyltransferase (GNAT) family
KY997_19790	PF13673	Acetyltransferase (GNAT) domain
KY997_19795	PF02600	Disulfide bond formation protein DsbB
KY997_19800	PF13462	Thioredoxin
KY997_19805	PF00403	Heavy-metal-associated domain
KY997_19815	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_19830	PF14310	Fibronectin type III-like domain
KY997_19830	PF00933	Glycosyl hydrolase family 3 N terminal domain
KY997_19830	PF01915	Glycosyl hydrolase family 3 C-terminal domain
KY997_19830	PF07691	PA14 domain
KY997_19835	PF00005	ABC transporter
KY997_19840	PF00950	ABC 3 transport family
KY997_19860	PF01418	Helix-turn-helix domain, rpiR family
KY997_19860	PF01380	SIS domain
KY997_19875	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_19880	PF01116	Fructose-bisphosphate aldolase class-II
KY997_19900	PF00403	Heavy-metal-associated domain
KY997_19905	PF02583	Metal-sensitive transcriptional repressor
KY997_19910	PF01965	DJ-1/PfpI family
KY997_19915	PF00455	DeoR C terminal sensor domain
KY997_19915	PF08220	DeoR-like helix-turn-helix domain
KY997_19925	PF01261	Xylose isomerase-like TIM barrel
KY997_19940	PF07690	Major Facilitator Superfamily
KY997_19945	PF07690	Major Facilitator Superfamily
KY997_19950	PF16715	Cyclodipeptide synthase
KY997_19955	PF00067	Cytochrome P450
KY997_19965	PF01047	MarR family
KY997_19970	PF01425	Amidase
KY997_19975	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_19975	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_19980	PF02525	Flavodoxin-like fold
KY997_20010	PF04545	Sigma-70, region 4
KY997_20015	PF12841	YvrJ protein family
KY997_20025	PF14184	Regulatory protein YrvL
KY997_20055	PF17189	Glycosyl hydrolase family 30 beta sandwich domain
KY997_20060	PF04616	Glycosyl hydrolases family 43
KY997_20060	PF03422	Carbohydrate binding module (family 6)
KY997_20070	PF14317	YcxB-like protein
KY997_20100	PF01668	SmpB protein
KY997_20115	PF03840	Preprotein translocase SecG subunit
KY997_20120	PF18277	AbrB C-terminal domain
KY997_20120	PF04014	Antidote-toxin recognition MazE, bacterial antitoxin
KY997_20125	PF01381	Helix-turn-helix
KY997_20140	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_20145	PF04069	Substrate binding domain of ABC-type glycine betaine transport system
KY997_20150	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_20160	PF12802	MarR family
KY997_20165	PF01914	MarC family integral membrane protein
KY997_20185	PF02743	Cache domain
KY997_20185	PF00672	HAMP domain
KY997_20185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_20200	PF01965	DJ-1/PfpI family
KY997_20205	PF03952	Enolase, N-terminal domain
KY997_20205	PF00113	Enolase, C-terminal TIM barrel domain
KY997_20210	PF06415	BPG-independent PGAM N-terminus (iPGM_N)
KY997_20210	PF01676	Metalloenzyme superfamily
KY997_20215	PF00121	Triosephosphate isomerase
KY997_20220	PF00162	Phosphoglycerate kinase
KY997_20225	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
KY997_20225	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
KY997_20235	PF00296	Luciferase-like monooxygenase
KY997_20260	PF02589	LUD domain
KY997_20290	PF09628	YvfG protein
KY997_20305	PF00132	Bacterial transferase hexapeptide (six repeats)
KY997_20305	PF17836	PglD N-terminal domain
KY997_20310	PF02397	Bacterial sugar transferase
KY997_20315	PF01943	Polysaccharide biosynthesis protein
KY997_20315	PF14667	Polysaccharide biosynthesis C-terminal domain
KY997_20320	PF00535	Glycosyl transferase family 2
KY997_20330	PF00535	Glycosyl transferase family 2
KY997_20340	PF13439	Glycosyltransferase Family 4
KY997_20340	PF00534	Glycosyl transferases group 1
KY997_20345	PF00535	Glycosyl transferase family 2
KY997_20350	PF13439	Glycosyltransferase Family 4
KY997_20350	PF00534	Glycosyl transferases group 1
KY997_20365	PF02706	Chain length determinant protein
KY997_20370	PF01381	Helix-turn-helix
KY997_20370	PF08671	Anti-repressor SinI
KY997_20380	PF02525	Flavodoxin-like fold
KY997_20395	PF04166	Pyridoxal phosphate biosynthetic protein PdxA
KY997_20400	PF07005	Sugar-binding N-terminal domain
KY997_20400	PF17042	Nucleotide-binding C-terminal domain
KY997_20410	PF00701	Dihydrodipicolinate synthetase family
KY997_20420	PF01638	HxlR-like helix-turn-helix
KY997_20425	PF00724	NADH:flavin oxidoreductase / NADH oxidase family
KY997_20430	PF02435	Levansucrase/Invertase
KY997_20455	PF00574	Clp protease
KY997_20460	PF03641	Possible lysine decarboxylase
KY997_20465	PF03819	MazG nucleotide pyrophosphohydrolase domain
KY997_20475	PF00916	Sulfate permease family
KY997_20475	PF01740	STAS domain
KY997_20480	PF00484	Carbonic anhydrase
KY997_20490	PF01613	Flavin reductase like domain
KY997_20500	PF00545	ribonuclease
KY997_20505	PF01337	Barstar (barnase inhibitor)
KY997_20515	PF00381	PTS HPr component phosphorylation site
KY997_20535	PF00293	NUDIX domain
KY997_20540	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_20555	PF01503	Phosphoribosyl-ATP pyrophosphohydrolase
KY997_20555	PF01502	Phosphoribosyl-AMP cyclohydrolase
KY997_20560	PF00977	Histidine biosynthesis protein
KY997_20565	PF00977	Histidine biosynthesis protein
KY997_20570	PF00117	Glutamine amidotransferase class-I
KY997_20575	PF00475	Imidazoleglycerol-phosphate dehydratase
KY997_20580	PF00815	Histidinol dehydrogenase
KY997_20585	PF01634	ATP phosphoribosyltransferase
KY997_20590	PF13393	Histidyl-tRNA synthetase
KY997_20595	PF13529	Peptidase_C39 like family
KY997_20600	PF03211	Pectate lyase
KY997_20605	PF14602	Hexapeptide repeat of succinyl-transferase
KY997_20610	PF13419	Haloacid dehalogenase-like hydrolase
KY997_20615	PF07670	Nucleoside recognition
KY997_20620	PF01790	Prolipoprotein diacylglyceryl transferase
KY997_20630	PF01047	MarR family
KY997_20635	PF07690	Major Facilitator Superfamily
KY997_20650	PF04024	PspC domain
KY997_20655	PF13349	Putative adhesin
KY997_20670	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_20680	PF17757	UvrB interaction domain
KY997_20680	PF12344	Ultra-violet resistance protein B
KY997_20680	PF02151	UvrB/uvrC motif
KY997_20680	PF04851	Type III restriction enzyme, res subunit
KY997_20680	PF00271	Helicase conserved C-terminal domain
KY997_20685	PF09964	Uncharacterized protein conserved in bacteria (DUF2198)
KY997_20695	PF17820	PDZ domain
KY997_20700	PF17423	Swarming motility protein
KY997_20705	PF17820	PDZ domain
KY997_20705	PF01471	Putative peptidoglycan binding domain
KY997_20705	PF03572	Peptidase family S41
KY997_20710	PF00180	Isocitrate/isopropylmalate dehydrogenase
KY997_20730	PF13442	Cytochrome C oxidase, cbb3-type, subunit III 
KY997_20735	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_20735	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_20745	PF02810	SEC-C motif
KY997_20745	PF07517	SecA DEAD-like domain
KY997_20745	PF07516	SecA Wing and Scaffold domain
KY997_20745	PF01043	SecA preprotein cross-linking domain
KY997_20765	PF02561	Flagellar protein FliS
KY997_20770	PF07196	Flagellin hook IN motif
KY997_20770	PF07195	Flagellar hook-associated protein 2 C-terminus
KY997_20770	PF02465	Flagellar hook-associated protein 2 N-terminus
KY997_20775	PF03646	FlaG protein
KY997_20785	PF00700	Bacterial flagellin C-terminal helical region
KY997_20785	PF00669	Bacterial flagellin N-terminal helical region
KY997_20790	PF02599	Global regulator protein family
KY997_20795	PF02623	FliW protein
KY997_20815	PF05130	FlgN protein
KY997_20820	PF04316	Anti-sigma-28 factor, FlgM
KY997_20835	PF10719	Late competence development protein ComFB
KY997_20840	PF04851	Type III restriction enzyme, res subunit
KY997_20840	PF00271	Helicase conserved C-terminal domain
KY997_20850	PF00072	Response regulator receiver domain
KY997_20850	PF00196	Bacterial regulatory proteins, luxR family
KY997_20855	PF05384	Sensor protein DegS
KY997_20855	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_20855	PF07730	Histidine kinase
KY997_20860	PF01205	Uncharacterized protein family UPF0029
KY997_20860	PF09186	Domain of unknown function (DUF1949)
KY997_20875	PF00953	Glycosyl transferase family 4
KY997_20885	PF00535	Glycosyl transferase family 2
KY997_20890	PF02706	Chain length determinant protein
KY997_20895	PF04932	O-Antigen ligase
KY997_20900	PF16363	GDP-mannose 4,6 dehydratase
KY997_20905	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
KY997_20905	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
KY997_20905	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
KY997_20915	PF01943	Polysaccharide biosynthesis protein
KY997_20915	PF14667	Polysaccharide biosynthesis C-terminal domain
KY997_20920	PF02397	Bacterial sugar transferase
KY997_20925	PF04122	Putative cell wall binding repeat 2
KY997_20925	PF01520	N-acetylmuramoyl-L-alanine amidase
KY997_20935	PF03816	Cell envelope-related transcriptional attenuator domain
KY997_20940	PF02350	UDP-N-acetylglucosamine 2-epimerase
KY997_20950	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
KY997_20955	PF03808	Glycosyl transferase WecB/TagA/CpsF family
KY997_20960	PF01467	Cytidylyltransferase-like
KY997_20970	PF04464	CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 
KY997_20980	PF01061	ABC-2 type transporter
KY997_20985	PF00005	ABC transporter
KY997_20990	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
KY997_20990	PF05036	Sporulation related domain
KY997_20990	PF08239	Bacterial SH3 domain
KY997_21010	PF00535	Glycosyl transferase family 2
KY997_21025	PF00984	UDP-glucose/GDP-mannose dehydrogenase family, central domain
KY997_21025	PF03720	UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain
KY997_21025	PF03721	UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
KY997_21030	PF13439	Glycosyltransferase Family 4
KY997_21030	PF00534	Glycosyl transferases group 1
KY997_21060	PF03812	2-keto-3-deoxygluconate permease
KY997_21070	PF00294	pfkB family carbohydrate kinase
KY997_21080	PF04962	KduI/IolB family
KY997_21090	PF00107	Zinc-binding dehydrogenase
KY997_21090	PF13823	Alcohol dehydrogenase GroES-associated
KY997_21090	PF08240	Alcohol dehydrogenase GroES-like domain
KY997_21105	PF03816	Cell envelope-related transcriptional attenuator domain
KY997_21115	PF00877	NlpC/P60 family
KY997_21125	PF09587	Bacterial capsule synthesis protein PGA_cap
KY997_21130	PF14102	Capsule biosynthesis CapC
KY997_21135	PF08245	Mur ligase middle domain
KY997_21140	PF00356	Bacterial regulatory proteins, lacI family
KY997_21145	PF00294	pfkB family carbohydrate kinase
KY997_21150	PF05025	RbsD / FucU transport protein family
KY997_21160	PF02653	Branched-chain amino acid transport system / permease component
KY997_21165	PF13407	Periplasmic binding protein domain
KY997_21170	PF03466	LysR substrate binding domain
KY997_21170	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_21175	PF08241	Methyltransferase domain
KY997_21180	PF03306	Alpha-acetolactate decarboxylase
KY997_21200	PF13404	AsnC-type helix-turn-helix domain
KY997_21200	PF01037	Lrp/AsnC ligand binding domain
KY997_21205	PF02417	Chromate transporter
KY997_21210	PF02417	Chromate transporter
KY997_21230	PF04434	SWIM zinc finger
KY997_21235	PF00271	Helicase conserved C-terminal domain
KY997_21235	PF12419	SNF2 Helicase protein 
KY997_21235	PF00176	SNF2 family N-terminal domain
KY997_21240	PF09234	Domain of unknown function (DUF1963)
KY997_21270	PF00923	Transaldolase/Fructose-6-phosphate aldolase
KY997_21275	PF00106	short chain dehydrogenase
KY997_21285	PF03612	Sorbitol phosphotransferase enzyme II N-terminus
KY997_21285	PF07663	Sorbitol phosphotransferase enzyme II C-terminus
KY997_21290	PF03608	PTS system enzyme II sorbitol-specific factor
KY997_21305	PF00436	Single-strand binding protein family
KY997_21320	PF01741	Large-conductance mechanosensitive channel, MscL
KY997_21325	PF07977	FabA-like domain
KY997_21330	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
KY997_21330	PF00460	Flagella basal body rod protein
KY997_21335	PF00460	Flagella basal body rod protein
KY997_21335	PF06429	Flagellar basal body rod FlgEFG protein C-terminal
KY997_21345	PF12116	Stage III sporulation protein D
KY997_21350	PF01047	MarR family
KY997_21355	PF07690	Major Facilitator Superfamily
KY997_21360	PF01569	PAP2 superfamily
KY997_21365	PF02833	DHHA2 domain
KY997_21365	PF01368	DHH family
KY997_21370	PF05067	Manganese containing catalase
KY997_21390	PF00571	CBS domain
KY997_21395	PF01544	CorA-like Mg2+ transporter protein
KY997_21405	PF00909	Ammonium Transporter Family
KY997_21410	PF00543	Nitrogen regulatory protein P-II
KY997_21415	PF00574	Clp protease
KY997_21420	PF12680	SnoaL-like domain
KY997_21420	PF08281	Sigma-70, region 4
KY997_21420	PF04542	Sigma-70 region 2 
KY997_21425	PF01551	Peptidase family M23
KY997_21430	PF00583	Acetyltransferase (GNAT) family
KY997_21435	PF17370	Family of unknown function (DUF5392)
KY997_21450	PF03621	MbtH-like protein
KY997_21460	PF00857	Isochorismatase family
KY997_21460	PF00550	Phosphopantetheine attachment site
KY997_21465	PF13193	AMP-binding enzyme C-terminal domain
KY997_21465	PF00501	AMP-binding enzyme
KY997_21470	PF00425	chorismate binding enzyme
KY997_21475	PF00106	short chain dehydrogenase
KY997_21480	PF00756	Putative esterase
KY997_21485	PF01032	FecCD transport family
KY997_21490	PF01032	FecCD transport family
KY997_21495	PF01497	Periplasmic binding protein
KY997_21505	PF17319	Family of unknown function (DUF5362)
KY997_21510	PF13302	Acetyltransferase (GNAT) domain
KY997_21520	PF02082	Transcriptional regulator
KY997_21535	PF04055	Radical SAM superfamily
KY997_21535	PF06463	Molybdenum Cofactor Synthesis C
KY997_21545	PF07690	Major Facilitator Superfamily
KY997_21555	PF00092	von Willebrand factor type A domain
KY997_21560	PF00092	von Willebrand factor type A domain
KY997_21570	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
KY997_21580	PF06612	Protein of unknown function (DUF1146)
KY997_21585	PF02823	ATP synthase, Delta/Epsilon chain, beta-sandwich domain
KY997_21585	PF00401	ATP synthase, Delta/Epsilon chain, long alpha-helix domain
KY997_21590	PF02874	ATP synthase alpha/beta family, beta-barrel domain
KY997_21590	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
KY997_21600	PF02874	ATP synthase alpha/beta family, beta-barrel domain
KY997_21600	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
KY997_21600	PF00306	ATP synthase alpha/beta chain, C terminal domain
KY997_21605	PF00213	ATP synthase delta (OSCP) subunit
KY997_21610	PF00430	ATP synthase B/B' CF(0)
KY997_21615	PF00137	ATP synthase subunit C
KY997_21620	PF00119	ATP synthase A chain
KY997_21625	PF03899	ATP synthase I chain
KY997_21635	PF00464	Serine hydroxymethyltransferase
KY997_21645	PF02502	Ribose/Galactose Isomerase
KY997_21650	PF01451	Low molecular weight phosphotyrosine protein phosphatase
KY997_21670	PF09551	Stage II sporulation protein R (spore_II_R)
KY997_21680	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_21680	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_21685	PF05116	Sucrose-6F-phosphate phosphohydrolase
KY997_21690	PF01041	DegT/DnrJ/EryC1/StrS aminotransferase family
KY997_21700	PF17827	PrmC N-terminal domain
KY997_21700	PF05175	Methyltransferase small domain
KY997_21705	PF00472	RF-1 domain
KY997_21705	PF03462	PCRF domain
KY997_21710	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_21720	PF03547	Membrane transport protein
KY997_21725	PF03949	Malic enzyme, NAD binding domain
KY997_21725	PF00390	Malic enzyme, N-terminal domain
KY997_21730	PF00265	Thymidine kinase
KY997_21735	PF01197	Ribosomal protein L31
KY997_21740	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain
KY997_21740	PF07498	Rho termination factor, N-terminal domain
KY997_21740	PF07497	Rho termination factor, RNA-binding domain
KY997_21745	PF03320	Bacterial fructose-1,6-bisphosphatase, glpX-encoded
KY997_21750	PF00275	EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
KY997_21755	PF00923	Transaldolase/Fructose-6-phosphate aldolase
KY997_21760	PF01116	Fructose-bisphosphate aldolase class-II
KY997_21765	PF00072	Response regulator receiver domain
KY997_21770	PF10740	Domain of unknown function (DUF2529)
KY997_21775	PF00117	Glutamine amidotransferase class-I
KY997_21775	PF06418	CTP synthase N-terminus
KY997_21780	PF05066	HB1, ASXL, restriction endonuclease HTH domain
KY997_21800	PF02737	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
KY997_21800	PF00725	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
KY997_21805	PF02803	Thiolase, C-terminal domain
KY997_21805	PF00108	Thiolase, N-terminal domain
KY997_21825	PF00750	tRNA synthetases class I (R)
KY997_21825	PF05746	DALR anticodon binding domain
KY997_21825	PF03485	Arginyl tRNA synthetase N terminal domain
KY997_21830	PF09148	Domain of unknown function (DUF1934)
KY997_21840	PF17284	Spermidine synthase tetramerisation domain
KY997_21850	PF08741	YwhD family
KY997_21855	PF02163	Peptidase family M50
KY997_21860	PF01361	Tautomerase enzyme
KY997_21890	PF14154	Domain of unknown function (DUF4306)
KY997_21915	PF01361	Tautomerase enzyme
KY997_21925	PF00171	Aldehyde dehydrogenase family
KY997_21930	PF09339	IclR helix-turn-helix domain
KY997_21930	PF01614	Bacterial transcriptional regulator
KY997_21945	PF06778	Chlorite dismutase
KY997_21950	PF17735	Biofilm surface layer A
KY997_21955	PF02386	Cation transport protein
KY997_21975	PF00005	ABC transporter
KY997_21985	PF00072	Response regulator receiver domain
KY997_21985	PF00196	Bacterial regulatory proteins, luxR family
KY997_21990	PF04241	Protein of unknown function (DUF423)
KY997_21995	PF00860	Permease family
KY997_22000	PF17261	Family of unknown function (DUF5327)
KY997_22010	PF03167	Uracil DNA glycosylase superfamily
KY997_22020	PF08543	Phosphomethylpyrimidine kinase
KY997_22030	PF00251	Glycosyl hydrolases family 32 N-terminal domain
KY997_22030	PF08244	Glycosyl hydrolases family 32 C terminal
KY997_22040	PF00874	PRD domain
KY997_22040	PF03123	CAT RNA binding domain
KY997_22050	PF13860	FlgD Ig-like domain
KY997_22050	PF00082	Subtilase family
KY997_22050	PF02225	PA domain
KY997_22050	PF05922	Peptidase inhibitor I9
KY997_22060	PF00296	Luciferase-like monooxygenase
KY997_22070	PF00881	Nitroreductase family
KY997_22080	PF01098	Cell cycle protein
KY997_22085	PF01098	Cell cycle protein
KY997_22090	PF07670	Nucleoside recognition
KY997_22100	PF17368	Spore morphogenesis and germination YwcE
KY997_22110	PF00583	Acetyltransferase (GNAT) family
KY997_22140	PF00196	Bacterial regulatory proteins, luxR family
KY997_22140	PF00072	Response regulator receiver domain
KY997_22145	PF03626	Prokaryotic Cytochrome C oxidase subunit IV 
KY997_22155	PF00115	Cytochrome C and Quinol oxidase polypeptide I
KY997_22160	PF02790	Cytochrome C oxidase subunit II, transmembrane domain
KY997_22160	PF00116	Cytochrome C oxidase subunit II, periplasmic domain
KY997_22165	PF16363	GDP-mannose 4,6 dehydratase
KY997_22175	PF03358	NADPH-dependent FMN reductase
KY997_22180	PF04341	Protein of unknown function, DUF485
KY997_22185	PF00474	Sodium:solute symporter family
KY997_22200	PF00480	ROK family
KY997_22205	PF02581	Thiamine monophosphate synthase
KY997_22210	PF02110	Hydroxyethylthiazole kinase family
KY997_22215	PF03466	LysR substrate binding domain
KY997_22215	PF00126	Bacterial regulatory helix-turn-helix protein, lysR family
KY997_22230	PF03788	LrgA family
KY997_22235	PF04172	LrgB-like family 
KY997_22245	PF17785	PUA-like domain
KY997_22245	PF10672	S-adenosylmethionine-dependent methyltransferase
KY997_22250	PF00903	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
KY997_22255	PF00389	D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain
KY997_22255	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
KY997_22260	PF01501	Glycosyl transferase family 8
KY997_22270	PF07730	Histidine kinase
KY997_22270	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_22275	PF00072	Response regulator receiver domain
KY997_22275	PF00196	Bacterial regulatory proteins, luxR family
KY997_22280	PF03176	MMPL family
KY997_22285	PF09529	Integral membrane protein (intg_mem_TP0381)
KY997_22300	PF01081	KDPG and KHG aldolase
KY997_22310	PF09339	IclR helix-turn-helix domain
KY997_22310	PF01614	Bacterial transcriptional regulator
KY997_22335	PF04607	Region found in RelA / SpoT proteins
KY997_22345	PF12459	D-Ala-teichoic acid biosynthesis protein
KY997_22350	PF00501	AMP-binding enzyme
KY997_22350	PF13193	AMP-binding enzyme C-terminal domain
KY997_22355	PF03062	MBOAT, membrane-bound O-acyltransferase family
KY997_22360	PF00550	Phosphopantetheine attachment site
KY997_22365	PF04914	DltD protein
KY997_22370	PF01063	Amino-transferase class IV
KY997_22375	PF07690	Major Facilitator Superfamily
KY997_22385	PF02255	PTS system, Lactose/Cellobiose specific IIA subunit
KY997_22395	PF02302	PTS system, Lactose/Cellobiose specific IIB subunit
KY997_22400	PF00874	PRD domain
KY997_22400	PF05043	Mga helix-turn-helix domain
KY997_22400	PF08279	HTH domain
KY997_22400	PF00359	Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
KY997_22405	PF02245	Methylpurine-DNA glycosylase (MPG)
KY997_22410	PF00392	Bacterial regulatory proteins, gntR family
KY997_22410	PF07729	FCD domain
KY997_22415	PF00285	Citrate synthase, C-terminal domain
KY997_22445	PF13472	GDSL-like Lipase/Acylhydrolase family
KY997_22450	PF17735	Biofilm surface layer A
KY997_22455	PF17735	Biofilm surface layer A
KY997_22460	PF07690	Major Facilitator Superfamily
KY997_22465	PF12679	ABC-2 family transporter protein
KY997_22470	PF13732	Domain of unknown function (DUF4162)
KY997_22470	PF00005	ABC transporter
KY997_22475	PF13396	Phospholipase_D-nuclease N-terminal
KY997_22490	PF08281	Sigma-70, region 4
KY997_22490	PF04542	Sigma-70 region 2 
KY997_22510	PF00199	Catalase
KY997_22510	PF06628	Catalase-related immune-responsive
KY997_22515	PF01475	Ferric uptake regulator family
KY997_22520	PF00762	Ferrochelatase
KY997_22525	PF00544	Pectate lyase
KY997_22530	PF01256	Carbohydrate kinase
KY997_22535	PF00005	ABC transporter
KY997_22535	PF00664	ABC transporter transmembrane region
KY997_22550	PF01654	Cytochrome bd terminal oxidase subunit I
KY997_22555	PF01226	Formate/nitrite transporter
KY997_22565	PF03949	Malic enzyme, NAD binding domain
KY997_22565	PF00390	Malic enzyme, N-terminal domain
KY997_22565	PF02826	D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
KY997_22570	PF03553	Na+/H+ antiporter family
KY997_22575	PF00206	Lyase
KY997_22575	PF10415	Fumarase C C-terminus
KY997_22585	PF01381	Helix-turn-helix
KY997_22590	PF10282	Lactonase, 7-bladed beta-propeller
KY997_22605	PF01522	Polysaccharide deacetylase
KY997_22625	PF07238	PilZ domain
KY997_22625	PF03552	Cellulose synthase
KY997_22625	PF00535	Glycosyl transferase family 2
KY997_22630	PF03390	2-hydroxycarboxylate transporter family
KY997_22635	PF03009	Glycerophosphoryl diester phosphodiesterase family
KY997_22640	PF05901	Excalibur calcium-binding domain
KY997_22655	PF17353	Family of unknown function (DUF5381)
KY997_22660	PF02588	Uncharacterised 5xTM membrane BCR, YitT family COG1284
KY997_22660	PF10035	Uncharacterized protein conserved in bacteria (DUF2179)
KY997_22665	PF02863	Arginine repressor, C-terminal domain
KY997_22665	PF01316	Arginine repressor, DNA binding domain
KY997_22680	PF13520	Amino acid permease
KY997_22695	PF00232	Glycosyl hydrolase family 1
KY997_22700	PF02378	Phosphotransferase system, EIIC 
KY997_22710	PF08281	Sigma-70, region 4
KY997_22710	PF04542	Sigma-70 region 2 
KY997_22720	PF01546	Peptidase family M20/M25/M40
KY997_22720	PF07687	Peptidase dimerisation domain
KY997_22725	PF08244	Glycosyl hydrolases family 32 C terminal
KY997_22725	PF00251	Glycosyl hydrolases family 32 N-terminal domain
KY997_22735	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_22765	PF01717	Cobalamin-independent synthase, Catalytic domain
KY997_22825	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
KY997_22825	PF00367	phosphotransferase system, EIIB
KY997_22825	PF02378	Phosphotransferase system, EIIC 
KY997_22830	PF03123	CAT RNA binding domain
KY997_22830	PF00874	PRD domain
KY997_22840	PF00005	ABC transporter
KY997_22845	PF09819	ABC-type cobalt transport system, permease component
KY997_22850	PF03070	TENA/THI-4/PQQC family
KY997_22860	PF00463	Isocitrate lyase family
KY997_22880	PF02687	FtsX-like permease family
KY997_22885	PF00005	ABC transporter
KY997_22890	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_22900	PF00232	Glycosyl hydrolase family 1
KY997_22905	PF00367	phosphotransferase system, EIIB
KY997_22905	PF00358	phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
KY997_22905	PF02378	Phosphotransferase system, EIIC 
KY997_22915	PF02275	Linear amide C-N hydrolases, choloylglycine hydrolase family
KY997_22925	PF00271	Helicase conserved C-terminal domain
KY997_22925	PF00270	DEAD/DEAH box helicase
KY997_22925	PF03880	DbpA RNA binding domain   
KY997_22955	PF02885	Glycosyl transferase family, helical bundle domain
KY997_22955	PF00591	Glycosyl transferase family, a/b domain
KY997_22955	PF07831	Pyrimidine nucleoside phosphorylase C-terminal domain
KY997_22965	PF01791	DeoC/LacD family aldolase
KY997_22970	PF04198	Putative sugar-binding domain
KY997_22980	PF00990	Diguanylate cyclase, GGDEF domain
KY997_22985	PF10096	Uncharacterized protein conserved in bacteria (DUF2334)
KY997_23000	PF00155	Aminotransferase class I and II
KY997_23015	PF07478	D-ala D-ala ligase C-terminus
KY997_23025	PF01116	Fructose-bisphosphate aldolase class-II
KY997_23030	PF01261	Xylose isomerase-like TIM barrel
KY997_23035	PF01261	Xylose isomerase-like TIM barrel
KY997_23040	PF01408	Oxidoreductase family, NAD-binding Rossmann fold
KY997_23040	PF02894	Oxidoreductase family, C-terminal alpha/beta domain
KY997_23050	PF01261	Xylose isomerase-like TIM barrel
KY997_23055	PF02775	Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
KY997_23055	PF02776	Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
KY997_23055	PF00205	Thiamine pyrophosphate enzyme, central domain
KY997_23065	PF04962	KduI/IolB family
KY997_23080	PF00248	Aldo/keto reductase family
KY997_23085	PF03009	Glycerophosphoryl diester phosphodiesterase family
KY997_23090	PF07690	Major Facilitator Superfamily
KY997_23100	PF00005	ABC transporter
KY997_23100	PF12848	ABC transporter
KY997_23145	PF07664	Ferrous iron transport protein B C terminus
KY997_23145	PF17910	FeoB cytosolic helical domain
KY997_23145	PF02421	Ferrous iron transport protein B
KY997_23145	PF07670	Nucleoside recognition
KY997_23155	PF01757	Acyltransferase family
KY997_23160	PF02687	FtsX-like permease family
KY997_23165	PF00005	ABC transporter
KY997_23170	PF02518	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
KY997_23175	PF00072	Response regulator receiver domain
KY997_23175	PF00486	Transcriptional regulatory protein, C terminal
KY997_23185	PF00672	HAMP domain
KY997_23185	PF00015	Methyl-accepting chemotaxis protein (MCP) signalling domain
KY997_23185	PF05227	CHASE3 domain
KY997_23200	PF07745	Glycosyl hydrolase family 53
KY997_23205	PF08533	Beta-galactosidase C-terminal domain
KY997_23205	PF08532	Beta-galactosidase trimerisation domain
KY997_23205	PF02449	Beta-galactosidase
KY997_23210	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_23215	PF00528	Binding-protein-dependent transport system inner membrane component
KY997_23220	PF13416	Bacterial extracellular solute-binding protein
KY997_23230	PF10509	Galactokinase galactose-binding signature
KY997_23230	PF08544	GHMP kinases C terminal 
KY997_23230	PF00288	GHMP kinases N terminal domain
KY997_23240	PF01087	Galactose-1-phosphate uridyl transferase, N-terminal domain
KY997_23240	PF02744	Galactose-1-phosphate uridyl transferase, C-terminal domain
KY997_23245	PF01325	Iron dependent repressor, N-terminal DNA binding domain
KY997_23245	PF00480	ROK family
KY997_23260	PF01878	EVE domain
KY997_23265	PF07729	FCD domain
KY997_23265	PF00392	Bacterial regulatory proteins, gntR family
KY997_23270	PF00370	FGGY family of carbohydrate kinases, N-terminal domain
KY997_23270	PF02782	FGGY family of carbohydrate kinases, C-terminal domain
KY997_23280	PF03446	NAD binding domain of 6-phosphogluconate dehydrogenase
KY997_23280	PF00393	6-phosphogluconate dehydrogenase, C-terminal domain
KY997_23285	PF00171	Aldehyde dehydrogenase family
KY997_23285	PF00465	Iron-containing alcohol dehydrogenase 
KY997_23290	PF00578	AhpC/TSA family
KY997_23295	PF13192	Thioredoxin domain
KY997_23295	PF07992	Pyridine nucleotide-disulphide oxidoreductase
KY997_23320	PF06874	Firmicute fructose-1,6-bisphosphatase
KY997_23330	PF01497	Periplasmic binding protein
KY997_23335	PF01032	FecCD transport family
KY997_23340	PF01032	FecCD transport family
