BLMD_00005 SM00382 ATPases associated with a variety of cellular activities BLMD_00005 SM00760 Bacterial dnaA protein helix-turn-helix domain BLMD_00010 SM00480 DNA polymerase III beta subunit BLMD_00030 SM00387 Histidine kinase-like ATPases BLMD_00030 SM00433 TopoisomeraseII BLMD_00035 SM00434 DNA Topoisomerase IV BLMD_00070 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_00070 SM01240 BLMD_00070 BLMD_00075 SM00936 Penicillin-binding protein 5, C-terminal domain BLMD_00110 SM00860 SMI1 / KNR4 family BLMD_00130 SM00257 Lysin motif BLMD_00130 SM00636 BLMD_00130 BLMD_00150 SM00382 ATPases associated with a variety of cellular activities BLMD_00160 SM00493 BLMD_00160 BLMD_00255 SM00465 GIY-YIG type nucleases (URI domain) BLMD_00265 SM00966 SpoVT / AbrB like domain BLMD_00280 SM01208 BLMD_00280 BLMD_00285 SM00493 BLMD_00285 BLMD_00290 SM00650 Ribosomal RNA adenine dimethylases BLMD_00335 SM01400 BLMD_00335 BLMD_00355 SM00487 DEAD-like helicases superfamily BLMD_00355 SM00490 helicase superfamily c-terminal domain BLMD_00355 SM00982 BLMD_00355 BLMD_00355 SM01058 CarD-like/TRCF domain BLMD_00360 SM00966 SpoVT / AbrB like domain BLMD_00375 SM00363 S4 RNA-binding domain BLMD_00395 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_00410 SM00331 Sigma factor PP2C-like phosphatases BLMD_00410 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BLMD_00420 SM00220 Serine/Threonine protein kinases, catalytic domain BLMD_00425 SM00977 TilS substrate C-terminal domain BLMD_00435 SM00382 ATPases associated with a variety of cellular activities BLMD_00485 SM00905 Dihydroneopterin aldolase BLMD_00495 SM00530 Helix-turn-helix XRE-family like proteins BLMD_00600 SM00382 ATPases associated with a variety of cellular activities BLMD_00600 SM01086 C-terminal, D2-small domain, of ClpB protein BLMD_00605 SM00382 ATPases associated with a variety of cellular activities BLMD_00615 SM00670 Large family of predicted nucleotide-binding domains BLMD_00640 SM00840 BLMD_00640 BLMD_00645 SM00535 Ribonuclease III family BLMD_00650 SM00967 RNA 2'-O ribose methyltransferase substrate binding BLMD_00675 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BLMD_00675 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BLMD_00680 SM00649 Ribosomal protein L11/L12 BLMD_00710 SM00663 RNA polymerase I subunit A N-terminus BLMD_00730 SM00838 Elongation factor G C-terminus BLMD_00730 SM00889 Elongation factor G, domain IV BLMD_00740 SM01403 BLMD_00740 BLMD_00760 SM01382 BLMD_00760 BLMD_00760 SM01383 BLMD_00760 BLMD_00775 SM00322 K homology RNA-binding domain BLMD_00795 SM01374 BLMD_00795 BLMD_00800 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BLMD_00865 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_00885 SM00662 RNA polymerases D BLMD_00895 SM00382 ATPases associated with a variety of cellular activities BLMD_00900 SM00382 ATPases associated with a variety of cellular activities BLMD_00970 SM00382 ATPases associated with a variety of cellular activities BLMD_00975 SM00530 Helix-turn-helix XRE-family like proteins BLMD_00990 SM00382 ATPases associated with a variety of cellular activities BLMD_01000 SM00382 ATPases associated with a variety of cellular activities BLMD_01005 SM01260 BLMD_01005 BLMD_01015 SM01260 BLMD_01015 BLMD_01025 SM00387 Histidine kinase-like ATPases BLMD_01030 SM00793 Accessory gene regulator B BLMD_01040 SM00448 cheY-homologous receiver domain BLMD_01040 SM00850 LytTr DNA-binding domain BLMD_01050 SM00646 BLMD_01050 BLMD_01065 SM01251 BLMD_01065 BLMD_01230 SM00382 ATPases associated with a variety of cellular activities BLMD_01235 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_01240 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_01270 SM00382 ATPases associated with a variety of cellular activities BLMD_01360 SM00422 helix_turn_helix, mercury resistance BLMD_01400 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_01400 SM00895 BLMD_01400 BLMD_01460 SM00342 helix_turn_helix, arabinose operon control protein BLMD_01465 SM00530 Helix-turn-helix XRE-family like proteins BLMD_01470 SM00421 helix_turn_helix, Lux Regulon BLMD_01530 SM00422 helix_turn_helix, mercury resistance BLMD_01565 SM00387 Histidine kinase-like ATPases BLMD_01570 SM00448 cheY-homologous receiver domain BLMD_01610 SM01130 BLMD_01610 BLMD_01625 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BLMD_01630 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_01630 SM00895 BLMD_01630 BLMD_01635 SM00858 BLMD_01635 BLMD_01655 SM00448 cheY-homologous receiver domain BLMD_01655 SM00862 Transcriptional regulatory protein, C terminal BLMD_01660 SM00387 Histidine kinase-like ATPases BLMD_01660 SM00388 His Kinase A (phosphoacceptor) domain BLMD_01665 SM00382 ATPases associated with a variety of cellular activities BLMD_01695 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_01705 SM00093 SERine Proteinase INhibitors BLMD_01720 SM00422 helix_turn_helix, mercury resistance BLMD_01760 SM00382 ATPases associated with a variety of cellular activities BLMD_01775 SM00448 cheY-homologous receiver domain BLMD_01775 SM00862 Transcriptional regulatory protein, C terminal BLMD_01780 SM00387 Histidine kinase-like ATPases BLMD_01780 SM00388 His Kinase A (phosphoacceptor) domain BLMD_01795 SM00822 BLMD_01795 BLMD_01820 SM00870 BLMD_01820 BLMD_01880 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_01880 SM00866 BLMD_01880 BLMD_01890 SM00060 Fibronectin type 3 domain BLMD_01890 SM00495 Chitin-binding domain type 3 BLMD_01890 SM00636 BLMD_01890 BLMD_01895 SM00636 BLMD_01895 BLMD_01920 SM00450 Rhodanese Homology Domain BLMD_01945 SM00382 ATPases associated with a variety of cellular activities BLMD_02015 SM00422 helix_turn_helix, mercury resistance BLMD_02100 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_02120 SM00062 Bacterial periplasmic substrate-binding proteins BLMD_02130 SM00382 ATPases associated with a variety of cellular activities BLMD_02155 SM00219 Tyrosine kinase, catalytic domain BLMD_02160 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_02160 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_02185 SM00382 ATPases associated with a variety of cellular activities BLMD_02205 SM00823 Phosphopantetheine attachment site BLMD_02210 SM00823 Phosphopantetheine attachment site BLMD_02215 SM00823 Phosphopantetheine attachment site BLMD_02220 SM00824 Thioesterase BLMD_02230 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_02245 SM00342 helix_turn_helix, arabinose operon control protein BLMD_02245 SM00871 Bacterial transcription activator, effector binding domain BLMD_02275 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_02275 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_02280 SM00382 ATPases associated with a variety of cellular activities BLMD_02290 SM00062 Bacterial periplasmic substrate-binding proteins BLMD_02295 SM00382 ATPases associated with a variety of cellular activities BLMD_02415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_02415 SM00387 Histidine kinase-like ATPases BLMD_02420 SM00342 helix_turn_helix, arabinose operon control protein BLMD_02420 SM00448 cheY-homologous receiver domain BLMD_02430 SM00382 ATPases associated with a variety of cellular activities BLMD_02445 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_02460 SM00871 Bacterial transcription activator, effector binding domain BLMD_02470 SM00710 Parallel beta-helix repeats BLMD_02495 SM00422 helix_turn_helix, mercury resistance BLMD_02500 SM00382 ATPases associated with a variety of cellular activities BLMD_02510 SM00448 cheY-homologous receiver domain BLMD_02510 SM00862 Transcriptional regulatory protein, C terminal BLMD_02515 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_02515 SM00387 Histidine kinase-like ATPases BLMD_02515 SM00388 His Kinase A (phosphoacceptor) domain BLMD_02520 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_02520 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_02540 SM00382 ATPases associated with a variety of cellular activities BLMD_02575 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_02580 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_02620 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_02630 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_02650 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_02650 SM00895 BLMD_02650 BLMD_02690 SM00861 Transketolase, pyrimidine binding domain BLMD_02715 SM00796 Allophanate hydrolase subunit 1 BLMD_02720 SM00797 Allophanate hydrolase subunit 2 BLMD_02725 SM00346 helix_turn_helix isocitrate lyase regulation BLMD_02795 SM00344 helix_turn_helix ASNC type BLMD_02800 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BLMD_02800 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BLMD_02800 SM00493 BLMD_02800 BLMD_02815 SM00830 Chorismate mutase type II BLMD_02895 SM00382 ATPases associated with a variety of cellular activities BLMD_02945 SM00487 DEAD-like helicases superfamily BLMD_02945 SM00490 helicase superfamily c-terminal domain BLMD_02970 SM01005 Alanine racemase, C-terminal domain BLMD_02995 SM00387 Histidine kinase-like ATPases BLMD_03000 SM00331 Sigma factor PP2C-like phosphatases BLMD_03020 SM00331 Sigma factor PP2C-like phosphatases BLMD_03025 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_03025 SM00732 Likely ribonuclease with RNase H fold. BLMD_03045 SM00731 SprT homologues. BLMD_03120 SM00357 Cold shock protein domain BLMD_03125 SM01058 CarD-like/TRCF domain BLMD_03130 SM00829 Enoylreductase BLMD_03135 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_03155 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_03275 SM00387 Histidine kinase-like ATPases BLMD_03275 SM00388 His Kinase A (phosphoacceptor) domain BLMD_03275 SM00448 cheY-homologous receiver domain BLMD_03280 SM00448 cheY-homologous receiver domain BLMD_03280 SM00862 Transcriptional regulatory protein, C terminal BLMD_03365 SM00382 ATPases associated with a variety of cellular activities BLMD_03375 SM00881 CoA binding domain BLMD_03400 SM00883 Chaperonin 10 Kd subunit BLMD_03520 SM00530 Helix-turn-helix XRE-family like proteins BLMD_03540 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_03555 SM00642 Alpha-amylase domain BLMD_03560 SM00354 helix_turn _helix lactose operon repressor BLMD_03565 SM00642 Alpha-amylase domain BLMD_03595 SM00642 Alpha-amylase domain BLMD_03605 SM00363 S4 RNA-binding domain BLMD_03610 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_03665 SM00342 helix_turn_helix, arabinose operon control protein BLMD_03665 SM00871 Bacterial transcription activator, effector binding domain BLMD_03705 SM00460 Transglutaminase/protease-like homologues BLMD_03745 SM01001 AIR carboxylase BLMD_03755 SM00998 Adenylosuccinate lyase C-terminus BLMD_03770 SM01211 BLMD_03770 BLMD_03795 SM00798 AICARFT/IMPCHase bienzyme BLMD_03795 SM00851 MGS-like domain BLMD_03800 SM01209 BLMD_03800 BLMD_03800 SM01210 BLMD_03800 BLMD_03855 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BLMD_03855 SM00292 breast cancer carboxy-terminal domain BLMD_03855 SM00532 Ligase N family BLMD_03930 SM00845 GatB domain BLMD_03975 SM00046 Diacylglycerol kinase catalytic domain (presumed) BLMD_03990 SM00490 helicase superfamily c-terminal domain BLMD_04015 SM01061 CAT RNA binding domain BLMD_04020 SM00028 Tetratricopeptide repeats BLMD_04050 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_04065 SM00530 Helix-turn-helix XRE-family like proteins BLMD_04080 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_04095 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_04115 SM00382 ATPases associated with a variety of cellular activities BLMD_04130 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_04150 SM00833 Cobalamin synthesis protein cobW C-terminal domain BLMD_04175 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_04175 SM00876 Biotin and Thiamin Synthesis associated domain BLMD_04190 SM00422 helix_turn_helix, mercury resistance BLMD_04205 SM00382 ATPases associated with a variety of cellular activities BLMD_04210 SM00487 DEAD-like helicases superfamily BLMD_04210 SM00490 helicase superfamily c-terminal domain BLMD_04215 SM00829 Enoylreductase BLMD_04240 SM00382 ATPases associated with a variety of cellular activities BLMD_04255 SM00849 Metallo-beta-lactamase superfamily BLMD_04260 SM00849 Metallo-beta-lactamase superfamily BLMD_04265 SM00631 BLMD_04265 BLMD_04275 SM00636 BLMD_04275 BLMD_04285 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_04330 SM00642 Alpha-amylase domain BLMD_04335 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_04335 SM00866 BLMD_04335 BLMD_04385 SM00028 Tetratricopeptide repeats BLMD_04400 SM00984 UDP binding domain BLMD_04440 SM00226 Low molecular weight phosphatase family BLMD_04505 SM00478 endonuclease III BLMD_04565 SM01061 CAT RNA binding domain BLMD_04600 SM00861 Transketolase, pyrimidine binding domain BLMD_04615 SM00382 ATPases associated with a variety of cellular activities BLMD_04675 SM00342 helix_turn_helix, arabinose operon control protein BLMD_04780 SM00478 endonuclease III BLMD_04780 SM00525 BLMD_04780 BLMD_04810 SM00382 ATPases associated with a variety of cellular activities BLMD_04815 SM00382 ATPases associated with a variety of cellular activities BLMD_04820 SM00382 ATPases associated with a variety of cellular activities BLMD_04995 SM00487 DEAD-like helicases superfamily BLMD_05015 SM00631 BLMD_05015 BLMD_05040 SM00382 ATPases associated with a variety of cellular activities BLMD_05045 SM00062 Bacterial periplasmic substrate-binding proteins BLMD_05065 SM00530 Helix-turn-helix XRE-family like proteins BLMD_05075 SM00382 ATPases associated with a variety of cellular activities BLMD_05110 SM00567 E-Z type HEAT repeats BLMD_05140 SM00763 PrkA AAA domain BLMD_05175 SM00382 ATPases associated with a variety of cellular activities BLMD_05185 SM00357 Cold shock protein domain BLMD_05190 SM00382 ATPases associated with a variety of cellular activities BLMD_05190 SM00930 BLMD_05190 BLMD_05240 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BLMD_05240 SM00091 PAS domain BLMD_05240 SM00387 Histidine kinase-like ATPases BLMD_05240 SM00388 His Kinase A (phosphoacceptor) domain BLMD_05245 SM00318 Staphylococcal nuclease homologues BLMD_05265 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_05280 SM00382 ATPases associated with a variety of cellular activities BLMD_05300 SM00829 Enoylreductase BLMD_05335 SM00530 Helix-turn-helix XRE-family like proteins BLMD_05340 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BLMD_05340 SM00387 Histidine kinase-like ATPases BLMD_05345 SM00421 helix_turn_helix, Lux Regulon BLMD_05345 SM00448 cheY-homologous receiver domain BLMD_05380 SM00257 Lysin motif BLMD_05435 SM00342 helix_turn_helix, arabinose operon control protein BLMD_05435 SM00871 Bacterial transcription activator, effector binding domain BLMD_05440 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_05475 SM00563 Phosphate acyltransferases BLMD_05495 SM01091 Transporter associated domain BLMD_05500 SM00422 helix_turn_helix, mercury resistance BLMD_05505 SM01091 Transporter associated domain BLMD_05520 SM00646 BLMD_05520 BLMD_05610 SM00382 ATPases associated with a variety of cellular activities BLMD_05615 SM00382 ATPases associated with a variety of cellular activities BLMD_05635 SM00382 ATPases associated with a variety of cellular activities BLMD_05680 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_05705 SM00028 Tetratricopeptide repeats BLMD_05720 SM00382 ATPases associated with a variety of cellular activities BLMD_05740 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_05780 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_05815 SM00382 ATPases associated with a variety of cellular activities BLMD_05900 SM00849 Metallo-beta-lactamase superfamily BLMD_05920 SM00530 Helix-turn-helix XRE-family like proteins BLMD_05970 SM00855 Phosphoglycerate mutase family BLMD_05975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_05990 SM00914 BLMD_05990 BLMD_06105 SM00354 helix_turn _helix lactose operon repressor BLMD_06170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_06170 SM00387 Histidine kinase-like ATPases BLMD_06170 SM00388 His Kinase A (phosphoacceptor) domain BLMD_06175 SM00448 cheY-homologous receiver domain BLMD_06175 SM00862 Transcriptional regulatory protein, C terminal BLMD_06300 SM00938 Nitrogen regulatory protein P-II BLMD_06310 SM00342 helix_turn_helix, arabinose operon control protein BLMD_06320 SM00354 helix_turn _helix lactose operon repressor BLMD_06350 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_06370 SM01006 Siderophore biosynthesis protein domain BLMD_06395 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_06400 SM01018 B12 binding domain BLMD_06415 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_06440 SM01240 BLMD_06440 BLMD_06470 SM00859 Semialdehyde dehydrogenase, NAD binding domain BLMD_06490 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BLMD_06495 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BLMD_06550 SM00825 Beta-ketoacyl synthase BLMD_06560 SM00382 ATPases associated with a variety of cellular activities BLMD_06565 SM00382 ATPases associated with a variety of cellular activities BLMD_06620 SM00382 ATPases associated with a variety of cellular activities BLMD_06625 SM00382 ATPases associated with a variety of cellular activities BLMD_06670 SM00448 cheY-homologous receiver domain BLMD_06675 SM00091 PAS domain BLMD_06675 SM00387 Histidine kinase-like ATPases BLMD_06715 SM01118 BLMD_06715 BLMD_06725 SM00954 Region found in RelA / SpoT proteins BLMD_06920 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_06935 SM00860 SMI1 / KNR4 family BLMD_06985 SM00644 BLMD_06985 BLMD_07015 SM01266 BLMD_07015 BLMD_07060 SM00257 Lysin motif BLMD_07105 SM00530 Helix-turn-helix XRE-family like proteins BLMD_07110 SM00530 Helix-turn-helix XRE-family like proteins BLMD_07125 SM00382 ATPases associated with a variety of cellular activities BLMD_07215 SM00257 Lysin motif BLMD_07270 SM00644 BLMD_07270 BLMD_07275 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_07275 SM00895 BLMD_07275 BLMD_07280 SM00829 Enoylreductase BLMD_07335 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_07335 SM00387 Histidine kinase-like ATPases BLMD_07340 SM00342 helix_turn_helix, arabinose operon control protein BLMD_07340 SM00448 cheY-homologous receiver domain BLMD_07365 SM00342 helix_turn_helix, arabinose operon control protein BLMD_07445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_07475 SM00382 ATPases associated with a variety of cellular activities BLMD_07490 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BLMD_07500 SM00382 ATPases associated with a variety of cellular activities BLMD_07525 SM00656 BLMD_07525 BLMD_07570 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BLMD_07585 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_07605 SM00855 Phosphoglycerate mutase family BLMD_07630 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_07630 SM00924 MgtE intracellular N domain BLMD_07640 SM00422 helix_turn_helix, mercury resistance BLMD_07650 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_07660 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BLMD_07665 SM00267 diguanylate cyclase BLMD_07730 SM00091 PAS domain BLMD_07730 SM00387 Histidine kinase-like ATPases BLMD_07730 SM00388 His Kinase A (phosphoacceptor) domain BLMD_07770 SM01007 Class II Aldolase and Adducin N-terminal domain BLMD_07795 SM00387 Histidine kinase-like ATPases BLMD_07795 SM00388 His Kinase A (phosphoacceptor) domain BLMD_07800 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_07815 SM00382 ATPases associated with a variety of cellular activities BLMD_07815 SM01086 C-terminal, D2-small domain, of ClpB protein BLMD_07850 SM00028 Tetratricopeptide repeats BLMD_07860 SM00530 Helix-turn-helix XRE-family like proteins BLMD_07935 SM00354 helix_turn _helix lactose operon repressor BLMD_07940 SM01061 CAT RNA binding domain BLMD_07975 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_07975 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_08000 SM00091 PAS domain BLMD_08000 SM00387 Histidine kinase-like ATPases BLMD_08000 SM00388 His Kinase A (phosphoacceptor) domain BLMD_08020 SM00260 Two component signalling adaptor domain BLMD_08020 SM00448 cheY-homologous receiver domain BLMD_08035 SM00257 Lysin motif BLMD_08050 SM00052 Putative diguanylate phosphodiesterase BLMD_08150 SM00852 Probable molybdopterin binding domain BLMD_08175 SM00382 ATPases associated with a variety of cellular activities BLMD_08180 SM00382 ATPases associated with a variety of cellular activities BLMD_08195 SM00382 ATPases associated with a variety of cellular activities BLMD_08200 SM01066 Carbohydrate binding domain BLMD_08210 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_08210 SM01134 BLMD_08210 BLMD_08240 SM00382 ATPases associated with a variety of cellular activities BLMD_08260 SM00966 SpoVT / AbrB like domain BLMD_08265 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BLMD_08265 SM00091 PAS domain BLMD_08265 SM00387 Histidine kinase-like ATPases BLMD_08265 SM00388 His Kinase A (phosphoacceptor) domain BLMD_08280 SM00849 Metallo-beta-lactamase superfamily BLMD_08320 SM00861 Transketolase, pyrimidine binding domain BLMD_08400 SM00838 Elongation factor G C-terminus BLMD_08410 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_08430 SM00670 Large family of predicted nucleotide-binding domains BLMD_08455 SM00878 Biotin carboxylase C-terminal domain BLMD_08500 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_08545 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_08600 SM00740 BLMD_08600 BLMD_08605 SM00740 BLMD_08605 BLMD_08660 SM00842 Cell division protein FtsA BLMD_08665 SM00864 Tubulin/FtsZ family, GTPase domain BLMD_08665 SM00865 Tubulin/FtsZ family, C-terminal domain BLMD_08695 SM00382 ATPases associated with a variety of cellular activities BLMD_08730 SM00363 S4 RNA-binding domain BLMD_08755 SM00363 S4 RNA-binding domain BLMD_08780 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BLMD_08785 SM00851 MGS-like domain BLMD_08785 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BLMD_08800 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BLMD_08855 SM00831 Cation transporter/ATPase, N-terminus BLMD_08870 SM00072 Guanylate kinase homologues. BLMD_08875 SM01409 BLMD_08875 BLMD_08885 SM00487 DEAD-like helicases superfamily BLMD_08885 SM00490 helicase superfamily c-terminal domain BLMD_08910 SM00331 Sigma factor PP2C-like phosphatases BLMD_08910 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BLMD_08915 SM00220 Serine/Threonine protein kinases, catalytic domain BLMD_08915 SM00740 BLMD_08915 BLMD_08930 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain BLMD_08950 SM01120 BLMD_08950 BLMD_08950 SM01121 BLMD_08950 BLMD_08965 SM00487 DEAD-like helicases superfamily BLMD_08965 SM00490 helicase superfamily c-terminal domain BLMD_08980 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BLMD_08985 SM00822 BLMD_08985 BLMD_08995 SM00358 Double-stranded RNA binding motif BLMD_08995 SM00535 Ribonuclease III family BLMD_09000 SM00968 SMC proteins Flexible Hinge Domain BLMD_09005 SM00382 ATPases associated with a variety of cellular activities BLMD_09005 SM00962 SRP54-type protein, GTPase domain BLMD_09005 SM00963 SRP54-type protein, helical bundle domain BLMD_09015 SM00382 ATPases associated with a variety of cellular activities BLMD_09015 SM00962 SRP54-type protein, GTPase domain BLMD_09015 SM00963 SRP54-type protein, helical bundle domain BLMD_09075 SM00881 CoA binding domain BLMD_09085 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BLMD_09085 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BLMD_09085 SM00493 BLMD_09085 BLMD_09105 SM00382 ATPases associated with a variety of cellular activities BLMD_09105 SM01086 C-terminal, D2-small domain, of ClpB protein BLMD_09145 SM00382 ATPases associated with a variety of cellular activities BLMD_09195 SM00448 cheY-homologous receiver domain BLMD_09230 SM00382 ATPases associated with a variety of cellular activities BLMD_09230 SM00962 SRP54-type protein, GTPase domain BLMD_09240 SM00448 cheY-homologous receiver domain BLMD_09245 SM00073 Histidine Phosphotransfer domain BLMD_09245 SM00260 Two component signalling adaptor domain BLMD_09245 SM00387 Histidine kinase-like ATPases BLMD_09245 SM01231 BLMD_09245 BLMD_09250 SM00260 Two component signalling adaptor domain BLMD_09310 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_09320 SM00479 BLMD_09320 BLMD_09320 SM00481 DNA polymerase alpha chain like domain BLMD_09325 SM01067 Cellulose binding domain BLMD_09350 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_09350 SM00322 K homology RNA-binding domain BLMD_09385 SM00904 Riboflavin kinase BLMD_09390 SM01387 BLMD_09390 BLMD_09395 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_09395 SM00322 K homology RNA-binding domain BLMD_09425 SM00859 Semialdehyde dehydrogenase, NAD binding domain BLMD_09435 SM01130 BLMD_09435 BLMD_09440 SM00849 Metallo-beta-lactamase superfamily BLMD_09455 SM00382 ATPases associated with a variety of cellular activities BLMD_09455 SM00843 BLMD_09455 BLMD_09460 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_09460 SM00866 BLMD_09460 BLMD_09495 SM00530 Helix-turn-helix XRE-family like proteins BLMD_09505 SM00852 Probable molybdopterin binding domain BLMD_09510 SM00382 ATPases associated with a variety of cellular activities BLMD_09515 SM00322 K homology RNA-binding domain BLMD_09515 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_09535 SM00829 Enoylreductase BLMD_09545 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_09560 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BLMD_09560 SM00534 ATPase domain of DNA mismatch repair MUTS family BLMD_09565 SM00853 MutL C terminal dimerisation domain BLMD_09565 SM01340 BLMD_09565 BLMD_09580 SM00860 SMI1 / KNR4 family BLMD_09595 SM00028 Tetratricopeptide repeats BLMD_09610 SM00833 Cobalamin synthesis protein cobW C-terminal domain BLMD_09690 SM00257 Lysin motif BLMD_09690 SM00636 BLMD_09690 BLMD_09780 SM00849 Metallo-beta-lactamase superfamily BLMD_09795 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_09795 SM00895 BLMD_09795 BLMD_09805 SM00646 BLMD_09805 BLMD_09875 SM00860 SMI1 / KNR4 family BLMD_09885 SM00860 SMI1 / KNR4 family BLMD_09900 SM00860 SMI1 / KNR4 family BLMD_09910 SM00028 Tetratricopeptide repeats BLMD_09940 SM00988 UreE urease accessory protein, N-terminal domain BLMD_09985 SM00382 ATPases associated with a variety of cellular activities BLMD_10000 SM00422 helix_turn_helix, mercury resistance BLMD_10005 SM01230 BLMD_10005 BLMD_10180 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_10190 SM00903 Flavin reductase like domain BLMD_10235 SM00257 Lysin motif BLMD_10240 SM00857 Resolvase, N terminal domain BLMD_10250 SM00861 Transketolase, pyrimidine binding domain BLMD_10275 SM00448 cheY-homologous receiver domain BLMD_10355 SM01207 BLMD_10355 BLMD_10360 SM00881 CoA binding domain BLMD_10365 SM00387 Histidine kinase-like ATPases BLMD_10365 SM00433 TopoisomeraseII BLMD_10370 SM00434 DNA Topoisomerase IV BLMD_10375 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_10385 SM01007 Class II Aldolase and Adducin N-terminal domain BLMD_10435 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_10450 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_10465 SM00100 Cyclic nucleotide-monophosphate binding domain BLMD_10465 SM00419 helix_turn_helix, cAMP Regulatory protein BLMD_10480 SM00100 Cyclic nucleotide-monophosphate binding domain BLMD_10480 SM00419 helix_turn_helix, cAMP Regulatory protein BLMD_10500 SM01067 Cellulose binding domain BLMD_10535 SM00710 Parallel beta-helix repeats BLMD_10535 SM00722 Domain present in carbohydrate binding proteins and sugar hydrolses BLMD_10560 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_10655 SM00382 ATPases associated with a variety of cellular activities BLMD_10660 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_10695 SM00354 helix_turn _helix lactose operon repressor BLMD_10700 SM00226 Low molecular weight phosphatase family BLMD_10710 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_10830 SM00878 Biotin carboxylase C-terminal domain BLMD_10835 SM00823 Phosphopantetheine attachment site BLMD_10840 SM00823 Phosphopantetheine attachment site BLMD_10845 SM00823 Phosphopantetheine attachment site BLMD_10850 SM00823 Phosphopantetheine attachment site BLMD_10855 SM00823 Phosphopantetheine attachment site BLMD_10885 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BLMD_10920 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BLMD_10970 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_10970 SM00529 Helix-turn-helix diphteria tox regulatory element BLMD_10975 SM00382 ATPases associated with a variety of cellular activities BLMD_10980 SM00382 ATPases associated with a variety of cellular activities BLMD_10990 SM00822 BLMD_10990 BLMD_11005 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_11010 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_11045 SM00382 ATPases associated with a variety of cellular activities BLMD_11050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_11050 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_11050 SM00319 Homologues of the ligand binding domain of Tar BLMD_11075 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_11110 SM00849 Metallo-beta-lactamase superfamily BLMD_11115 SM00871 Bacterial transcription activator, effector binding domain BLMD_11135 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_11140 SM00849 Metallo-beta-lactamase superfamily BLMD_11205 SM00257 Lysin motif BLMD_11210 SM00341 Helicase and RNase D C-terminal BLMD_11210 SM00487 DEAD-like helicases superfamily BLMD_11210 SM00490 helicase superfamily c-terminal domain BLMD_11210 SM00956 BLMD_11210 BLMD_11245 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_11245 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BLMD_11255 SM00860 SMI1 / KNR4 family BLMD_11335 SM00860 SMI1 / KNR4 family BLMD_11510 SM00861 Transketolase, pyrimidine binding domain BLMD_11515 SM00327 von Willebrand factor (vWF) type A domain BLMD_11520 SM00382 ATPases associated with a variety of cellular activities BLMD_11530 SM00257 Lysin motif BLMD_11610 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_11610 SM00245 tail specific protease BLMD_11650 SM00014 Acid phosphatase homologues BLMD_11690 SM00882 Coenzyme A transferase BLMD_11695 SM00882 Coenzyme A transferase BLMD_11740 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_11750 SM00267 diguanylate cyclase BLMD_11805 SM00382 ATPases associated with a variety of cellular activities BLMD_11855 SM00567 E-Z type HEAT repeats BLMD_11855 SM00932 Scaffold protein Nfu/NifU N terminal BLMD_11890 SM00357 Cold shock protein domain BLMD_11930 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BLMD_11930 SM00475 5'-3' exonuclease BLMD_11980 SM00491 BLMD_11980 BLMD_12000 SM00981 BLMD_12000 BLMD_12030 SM00487 DEAD-like helicases superfamily BLMD_12030 SM00490 helicase superfamily c-terminal domain BLMD_12080 SM00060 Fibronectin type 3 domain BLMD_12090 SM00478 endonuclease III BLMD_12090 SM00525 BLMD_12090 BLMD_12120 SM00479 BLMD_12120 BLMD_12120 SM00487 DEAD-like helicases superfamily BLMD_12120 SM00491 BLMD_12120 BLMD_12165 SM00851 MGS-like domain BLMD_12215 SM00914 BLMD_12215 BLMD_12220 SM00028 Tetratricopeptide repeats BLMD_12285 SM00138 Methyltransferase, chemotaxis proteins BLMD_12290 SM00562 BLMD_12290 BLMD_12320 SM00411 bacterial (prokaryotic) histone like domain BLMD_12375 SM01240 BLMD_12375 BLMD_12380 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_12405 SM00870 BLMD_12405 BLMD_12415 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BLMD_12435 SM00257 Lysin motif BLMD_12445 SM00487 DEAD-like helicases superfamily BLMD_12445 SM00490 helicase superfamily c-terminal domain BLMD_12470 SM00257 Lysin motif BLMD_12500 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_12500 SM00387 Histidine kinase-like ATPases BLMD_12500 SM00388 His Kinase A (phosphoacceptor) domain BLMD_12505 SM00448 cheY-homologous receiver domain BLMD_12505 SM00862 Transcriptional regulatory protein, C terminal BLMD_12510 SM00091 PAS domain BLMD_12510 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_12510 SM00387 Histidine kinase-like ATPases BLMD_12510 SM00388 His Kinase A (phosphoacceptor) domain BLMD_12515 SM00448 cheY-homologous receiver domain BLMD_12515 SM00862 Transcriptional regulatory protein, C terminal BLMD_12535 SM00363 S4 RNA-binding domain BLMD_12550 SM00936 Penicillin-binding protein 5, C-terminal domain BLMD_12620 SM00028 Tetratricopeptide repeats BLMD_12700 SM00387 Histidine kinase-like ATPases BLMD_12710 SM00936 Penicillin-binding protein 5, C-terminal domain BLMD_12830 SM00704 CDGSH-type zinc finger. Function unknown. BLMD_12870 SM00382 ATPases associated with a variety of cellular activities BLMD_12875 SM00382 ATPases associated with a variety of cellular activities BLMD_12925 SM00382 ATPases associated with a variety of cellular activities BLMD_12935 SM00014 Acid phosphatase homologues BLMD_12945 SM00382 ATPases associated with a variety of cellular activities BLMD_12950 SM00387 Histidine kinase-like ATPases BLMD_12950 SM00388 His Kinase A (phosphoacceptor) domain BLMD_12955 SM00448 cheY-homologous receiver domain BLMD_12955 SM00862 Transcriptional regulatory protein, C terminal BLMD_12960 SM00823 Phosphopantetheine attachment site BLMD_12970 SM00823 Phosphopantetheine attachment site BLMD_12970 SM01294 BLMD_12970 BLMD_13005 SM00028 Tetratricopeptide repeats BLMD_13035 SM00849 Metallo-beta-lactamase superfamily BLMD_13090 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_13090 SM00866 BLMD_13090 BLMD_13115 SM00098 Alkaline phosphatase homologues BLMD_13125 SM01350 BLMD_13125 BLMD_13160 SM00382 ATPases associated with a variety of cellular activities BLMD_13170 SM00062 Bacterial periplasmic substrate-binding proteins BLMD_13170 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BLMD_13180 SM00046 Diacylglycerol kinase catalytic domain (presumed) BLMD_13190 SM00861 Transketolase, pyrimidine binding domain BLMD_13210 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BLMD_13220 SM00091 PAS domain BLMD_13220 SM00382 ATPases associated with a variety of cellular activities BLMD_13235 SM00646 BLMD_13235 BLMD_13250 SM00448 cheY-homologous receiver domain BLMD_13255 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_13270 SM00363 S4 RNA-binding domain BLMD_13275 SM00861 Transketolase, pyrimidine binding domain BLMD_13310 SM00878 Biotin carboxylase C-terminal domain BLMD_13355 SM00382 ATPases associated with a variety of cellular activities BLMD_13365 SM00841 Elongation factor P, C-terminal BLMD_13365 SM01185 BLMD_13365 BLMD_13400 SM00529 Helix-turn-helix diphteria tox regulatory element BLMD_13410 SM00450 Rhodanese Homology Domain BLMD_13425 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_13425 SM00382 ATPases associated with a variety of cellular activities BLMD_13450 SM00487 DEAD-like helicases superfamily BLMD_13450 SM00490 helicase superfamily c-terminal domain BLMD_13465 SM00530 Helix-turn-helix XRE-family like proteins BLMD_13525 SM00382 ATPases associated with a variety of cellular activities BLMD_13550 SM00849 Metallo-beta-lactamase superfamily BLMD_13570 SM00631 BLMD_13570 BLMD_13600 SM00028 Tetratricopeptide repeats BLMD_13635 SM00382 ATPases associated with a variety of cellular activities BLMD_13640 SM00382 ATPases associated with a variety of cellular activities BLMD_13720 SM00382 ATPases associated with a variety of cellular activities BLMD_13735 SM00518 AP endonuclease family 2 BLMD_13740 SM00487 DEAD-like helicases superfamily BLMD_13740 SM00490 helicase superfamily c-terminal domain BLMD_13810 SM00400 zinc finger BLMD_13810 SM00493 BLMD_13810 BLMD_13825 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_13870 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_13920 SM01133 BLMD_13920 BLMD_13925 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_13940 SM00271 DnaJ molecular chaperone homology domain BLMD_13960 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_13965 SM00838 Elongation factor G C-terminus BLMD_14015 SM00849 Metallo-beta-lactamase superfamily BLMD_14025 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BLMD_14045 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_14055 SM01103 BLMD_14055 BLMD_14095 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_14095 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region BLMD_14180 SM00903 Flavin reductase like domain BLMD_14185 SM00422 helix_turn_helix, mercury resistance BLMD_14230 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BLMD_14235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BLMD_14235 SM00091 PAS domain BLMD_14270 SM00450 Rhodanese Homology Domain BLMD_14270 SM00849 Metallo-beta-lactamase superfamily BLMD_14280 SM00421 helix_turn_helix, Lux Regulon BLMD_14280 SM00448 cheY-homologous receiver domain BLMD_14285 SM00387 Histidine kinase-like ATPases BLMD_14305 SM00450 Rhodanese Homology Domain BLMD_14305 SM00849 Metallo-beta-lactamase superfamily BLMD_14310 SM00450 Rhodanese Homology Domain BLMD_14340 SM00650 Ribosomal RNA adenine dimethylases BLMD_14355 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BLMD_14375 SM00421 helix_turn_helix, Lux Regulon BLMD_14375 SM00448 cheY-homologous receiver domain BLMD_14400 SM00382 ATPases associated with a variety of cellular activities BLMD_14405 SM00382 ATPases associated with a variety of cellular activities BLMD_14410 SM00422 helix_turn_helix, mercury resistance BLMD_14430 SM00014 Acid phosphatase homologues BLMD_14435 SM00871 Bacterial transcription activator, effector binding domain BLMD_14485 SM00640 Glycosyl hydrolases family 32 BLMD_14510 SM00382 ATPases associated with a variety of cellular activities BLMD_14525 SM01059 Chloramphenicol acetyltransferase BLMD_14530 SM00342 helix_turn_helix, arabinose operon control protein BLMD_14665 SM00650 Ribosomal RNA adenine dimethylases BLMD_14720 SM00732 Likely ribonuclease with RNase H fold. BLMD_14730 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BLMD_14755 SM00382 ATPases associated with a variety of cellular activities BLMD_14760 SM00028 Tetratricopeptide repeats BLMD_14780 SM00382 ATPases associated with a variety of cellular activities BLMD_14805 SM00287 Bacterial SH3 domain homologues BLMD_14805 SM00646 BLMD_14805 BLMD_14815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_14815 SM00954 Region found in RelA / SpoT proteins BLMD_14860 SM01323 BLMD_14860 BLMD_14880 SM00382 ATPases associated with a variety of cellular activities BLMD_14885 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BLMD_14895 SM00220 Serine/Threonine protein kinases, catalytic domain BLMD_14935 SM00257 Lysin motif BLMD_14980 SM01317 BLMD_14980 BLMD_15015 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_15085 SM00257 Lysin motif BLMD_15095 SM01004 Delta-aminolevulinic acid dehydratase BLMD_15130 SM00382 ATPases associated with a variety of cellular activities BLMD_15130 SM00464 Found in ATP-dependent protease La (LON) BLMD_15135 SM00382 ATPases associated with a variety of cellular activities BLMD_15140 SM00382 ATPases associated with a variety of cellular activities BLMD_15140 SM00994 ClpX C4-type zinc finger BLMD_15140 SM01086 C-terminal, D2-small domain, of ClpB protein BLMD_15165 SM01329 BLMD_15165 BLMD_15170 SM00917 LeuA allosteric (dimerisation) domain BLMD_15200 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BLMD_15235 SM00909 Sporulation and spore germination BLMD_15245 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_15250 SM00421 helix_turn_helix, Lux Regulon BLMD_15290 SM00465 GIY-YIG type nucleases (URI domain) BLMD_15300 SM00893 Electron transfer flavoprotein domain BLMD_15305 SM00893 Electron transfer flavoprotein domain BLMD_15330 SM00463 Small MutS-related domain BLMD_15330 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BLMD_15330 SM00534 ATPase domain of DNA mismatch repair MUTS family BLMD_15335 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BLMD_15335 SM00481 DNA polymerase alpha chain like domain BLMD_15335 SM00483 DNA polymerase X family BLMD_15370 SM00873 B3/4 domain BLMD_15370 SM00874 tRNA synthetase B5 domain BLMD_15370 SM00896 Ferredoxin-fold anticodon binding domain BLMD_15380 SM00967 RNA 2'-O ribose methyltransferase substrate binding BLMD_15415 SM00813 Alpha-L-arabinofuranosidase C-terminus BLMD_15440 SM01007 Class II Aldolase and Adducin N-terminal domain BLMD_15505 SM00448 cheY-homologous receiver domain BLMD_15505 SM00850 LytTr DNA-binding domain BLMD_15510 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BLMD_15510 SM00387 Histidine kinase-like ATPases BLMD_15525 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BLMD_15540 SM00382 ATPases associated with a variety of cellular activities BLMD_15570 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BLMD_15575 SM00656 BLMD_15575 BLMD_15590 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BLMD_15590 SM01232 BLMD_15590 BLMD_15595 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BLMD_15595 SM00474 3'-5' exonuclease BLMD_15595 SM00475 5'-3' exonuclease BLMD_15595 SM00482 DNA polymerase A domain BLMD_15600 SM00091 PAS domain BLMD_15600 SM00387 Histidine kinase-like ATPases BLMD_15600 SM00388 His Kinase A (phosphoacceptor) domain BLMD_15605 SM00448 cheY-homologous receiver domain BLMD_15605 SM00862 Transcriptional regulatory protein, C terminal BLMD_15615 SM01329 BLMD_15615 BLMD_15670 SM00919 Malic enzyme, NAD binding domain BLMD_15670 SM01274 BLMD_15670 BLMD_15675 SM00481 DNA polymerase alpha chain like domain BLMD_15705 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_15715 SM00849 Metallo-beta-lactamase superfamily BLMD_15735 SM00852 Probable molybdopterin binding domain BLMD_15780 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_15795 SM00981 BLMD_15795 BLMD_15825 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BLMD_15830 SM00267 diguanylate cyclase BLMD_15835 SM00363 S4 RNA-binding domain BLMD_15835 SM01390 BLMD_15835 BLMD_15850 SM00363 S4 RNA-binding domain BLMD_15865 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_15885 SM00354 helix_turn _helix lactose operon repressor BLMD_15890 SM00830 Chorismate mutase type II BLMD_15920 SM00382 ATPases associated with a variety of cellular activities BLMD_15920 SM00843 BLMD_15920 BLMD_15955 SM00919 Malic enzyme, NAD binding domain BLMD_15955 SM01274 BLMD_15955 BLMD_15960 SM00849 Metallo-beta-lactamase superfamily BLMD_15980 SM00642 Alpha-amylase domain BLMD_15985 SM00046 Diacylglycerol kinase catalytic domain (presumed) BLMD_16030 SM00382 ATPases associated with a variety of cellular activities BLMD_16035 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_16040 SM00363 S4 RNA-binding domain BLMD_16065 SM00450 Rhodanese Homology Domain BLMD_16105 SM00342 helix_turn_helix, arabinose operon control protein BLMD_16175 SM00382 ATPases associated with a variety of cellular activities BLMD_16185 SM00382 ATPases associated with a variety of cellular activities BLMD_16190 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_16200 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_16225 SM00014 Acid phosphatase homologues BLMD_16270 SM00382 ATPases associated with a variety of cellular activities BLMD_16315 SM01234 BLMD_16315 BLMD_16320 SM00947 Carbonic anhydrase BLMD_16325 SM00833 Cobalamin synthesis protein cobW C-terminal domain BLMD_16360 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BLMD_16420 SM00642 Alpha-amylase domain BLMD_16545 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_16570 SM00028 Tetratricopeptide repeats BLMD_16630 SM01005 Alanine racemase, C-terminal domain BLMD_16695 SM00860 SMI1 / KNR4 family BLMD_16785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_16785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_16785 SM00319 Homologues of the ligand binding domain of Tar BLMD_16790 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_16790 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_16790 SM00319 Homologues of the ligand binding domain of Tar BLMD_16795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_16795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_16795 SM00319 Homologues of the ligand binding domain of Tar BLMD_16815 SM00642 Alpha-amylase domain BLMD_16835 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_16835 SM01091 Transporter associated domain BLMD_16895 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_16905 SM00344 helix_turn_helix ASNC type BLMD_16935 SM01298 BLMD_16935 BLMD_16940 SM00479 BLMD_16940 BLMD_16965 SM00091 PAS domain BLMD_16965 SM00387 Histidine kinase-like ATPases BLMD_16970 SM00448 cheY-homologous receiver domain BLMD_17045 SM00421 helix_turn_helix, Lux Regulon BLMD_17045 SM00448 cheY-homologous receiver domain BLMD_17080 SM00052 Putative diguanylate phosphodiesterase BLMD_17130 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_17185 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BLMD_17185 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BLMD_17295 SM00028 Tetratricopeptide repeats BLMD_17375 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_17465 SM01092 CO dehydrogenase flavoprotein C-terminal domain BLMD_17485 SM00028 Tetratricopeptide repeats BLMD_17515 SM00382 ATPases associated with a variety of cellular activities BLMD_17540 SM00382 ATPases associated with a variety of cellular activities BLMD_17540 SM00930 BLMD_17540 BLMD_17555 SM00493 BLMD_17555 BLMD_17615 SM00382 ATPases associated with a variety of cellular activities BLMD_17660 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_17665 SM00448 cheY-homologous receiver domain BLMD_17665 SM00862 Transcriptional regulatory protein, C terminal BLMD_17670 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_17670 SM00387 Histidine kinase-like ATPases BLMD_17670 SM00388 His Kinase A (phosphoacceptor) domain BLMD_17710 SM00421 helix_turn_helix, Lux Regulon BLMD_17710 SM00448 cheY-homologous receiver domain BLMD_17715 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_17715 SM00387 Histidine kinase-like ATPases BLMD_17780 SM01130 BLMD_17780 BLMD_17785 SM00382 ATPases associated with a variety of cellular activities BLMD_17800 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_17800 SM00895 BLMD_17800 BLMD_17820 SM00710 Parallel beta-helix repeats BLMD_17825 SM00858 BLMD_17825 BLMD_17835 SM00354 helix_turn _helix lactose operon repressor BLMD_17850 SM00387 Histidine kinase-like ATPases BLMD_17850 SM00388 His Kinase A (phosphoacceptor) domain BLMD_17855 SM00448 cheY-homologous receiver domain BLMD_17855 SM00862 Transcriptional regulatory protein, C terminal BLMD_17860 SM00382 ATPases associated with a variety of cellular activities BLMD_17980 SM00606 Cellulose Binding Domain Type IV BLMD_17980 SM01217 BLMD_17980 BLMD_17985 SM00382 ATPases associated with a variety of cellular activities BLMD_18050 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_18050 SM01134 BLMD_18050 BLMD_18070 SM01007 Class II Aldolase and Adducin N-terminal domain BLMD_18100 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_18120 SM00450 Rhodanese Homology Domain BLMD_18140 SM00835 Cupin BLMD_18165 SM00606 Cellulose Binding Domain Type IV BLMD_18205 SM00316 Ribosomal protein S1-like RNA-binding domain BLMD_18205 SM00357 Cold shock protein domain BLMD_18205 SM00955 BLMD_18205 BLMD_18220 SM00966 SpoVT / AbrB like domain BLMD_18225 SM00530 Helix-turn-helix XRE-family like proteins BLMD_18230 SM00530 Helix-turn-helix XRE-family like proteins BLMD_18235 SM00530 Helix-turn-helix XRE-family like proteins BLMD_18255 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_18255 SM00382 ATPases associated with a variety of cellular activities BLMD_18300 SM01192 BLMD_18300 BLMD_18300 SM01193 BLMD_18300 BLMD_18320 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BLMD_18350 SM00382 ATPases associated with a variety of cellular activities BLMD_18375 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_18375 SM00895 BLMD_18375 BLMD_18470 SM00530 Helix-turn-helix XRE-family like proteins BLMD_18505 SM01130 BLMD_18505 BLMD_18530 SM00640 Glycosyl hydrolases family 32 BLMD_18560 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_18570 SM00947 Carbonic anhydrase BLMD_18585 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BLMD_18640 SM00028 Tetratricopeptide repeats BLMD_18725 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_18770 SM00382 ATPases associated with a variety of cellular activities BLMD_18775 SM00487 DEAD-like helicases superfamily BLMD_18775 SM00490 helicase superfamily c-terminal domain BLMD_18790 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_18800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_18800 SM00245 tail specific protease BLMD_18805 SM01329 BLMD_18805 BLMD_18820 SM00382 ATPases associated with a variety of cellular activities BLMD_18840 SM00937 BLMD_18840 BLMD_18845 SM00957 SecA DEAD-like domain BLMD_18845 SM00958 SecA preprotein cross-linking domain BLMD_18940 SM00487 DEAD-like helicases superfamily BLMD_18940 SM00490 helicase superfamily c-terminal domain BLMD_18950 SM00421 helix_turn_helix, Lux Regulon BLMD_18950 SM00448 cheY-homologous receiver domain BLMD_18955 SM00387 Histidine kinase-like ATPases BLMD_19005 SM00984 UDP binding domain BLMD_19025 SM00646 BLMD_19025 BLMD_19095 SM00382 ATPases associated with a variety of cellular activities BLMD_19130 SM00047 Lysozyme subfamily 2 BLMD_19130 SM00287 Bacterial SH3 domain homologues BLMD_19165 SM00354 helix_turn _helix lactose operon repressor BLMD_19205 SM00854 Bacterial capsule synthesis protein PGA_cap BLMD_19220 SM00354 helix_turn _helix lactose operon repressor BLMD_19235 SM00382 ATPases associated with a variety of cellular activities BLMD_19280 SM00344 helix_turn_helix ASNC type BLMD_19310 SM00487 DEAD-like helicases superfamily BLMD_19310 SM00490 helicase superfamily c-terminal domain BLMD_19335 SM00028 Tetratricopeptide repeats BLMD_19345 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_19345 SM01134 BLMD_19345 BLMD_19435 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_19445 SM00014 Acid phosphatase homologues BLMD_19450 SM01131 BLMD_19450 BLMD_19475 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_19485 SM00116 Domain in cystathionine beta-synthase and other proteins. BLMD_19485 SM01091 Transporter associated domain BLMD_19495 SM00938 Nitrogen regulatory protein P-II BLMD_19530 SM00155 Phospholipase D. Active site motifs. BLMD_19540 SM00923 MbtH-like protein BLMD_19545 SM00823 Phosphopantetheine attachment site BLMD_19545 SM00824 Thioesterase BLMD_19565 SM00822 BLMD_19565 BLMD_19590 SM00342 helix_turn_helix, arabinose operon control protein BLMD_19620 SM00729 Elongator protein 3, MiaB family, Radical SAM BLMD_19640 SM00327 von Willebrand factor (vWF) type A domain BLMD_19645 SM00327 von Willebrand factor (vWF) type A domain BLMD_19675 SM00382 ATPases associated with a variety of cellular activities BLMD_19740 SM00226 Low molecular weight phosphatase family BLMD_19785 SM00354 helix_turn _helix lactose operon repressor BLMD_19800 SM00937 BLMD_19800 BLMD_19820 SM00919 Malic enzyme, NAD binding domain BLMD_19820 SM01274 BLMD_19820 BLMD_19835 SM00357 Cold shock protein domain BLMD_19835 SM00382 ATPases associated with a variety of cellular activities BLMD_19835 SM00959 Rho termination factor, N-terminal domain BLMD_19860 SM00448 cheY-homologous receiver domain BLMD_19905 SM00155 Phospholipase D. Active site motifs. BLMD_19915 SM00836 DALR anticodon binding domain BLMD_19915 SM01016 Arginyl tRNA synthetase N terminal dom BLMD_19965 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BLMD_20020 SM00346 helix_turn_helix isocitrate lyase regulation BLMD_20070 SM00382 ATPases associated with a variety of cellular activities BLMD_20080 SM00421 helix_turn_helix, Lux Regulon BLMD_20080 SM00448 cheY-homologous receiver domain BLMD_20105 SM00986 Uracil DNA glycosylase superfamily BLMD_20105 SM00987 UreE urease accessory protein, C-terminal domain BLMD_20125 SM00640 Glycosyl hydrolases family 32 BLMD_20135 SM01061 CAT RNA binding domain BLMD_20200 SM00382 ATPases associated with a variety of cellular activities BLMD_20205 SM00382 ATPases associated with a variety of cellular activities BLMD_20230 SM00421 helix_turn_helix, Lux Regulon BLMD_20230 SM00448 cheY-homologous receiver domain BLMD_20345 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BLMD_20365 SM00387 Histidine kinase-like ATPases BLMD_20370 SM00421 helix_turn_helix, Lux Regulon BLMD_20370 SM00448 cheY-homologous receiver domain BLMD_20390 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BLMD_20405 SM00346 helix_turn_helix isocitrate lyase regulation BLMD_20430 SM00954 Region found in RelA / SpoT proteins BLMD_20505 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_20505 SM00895 BLMD_20505 BLMD_20535 SM00382 ATPases associated with a variety of cellular activities BLMD_20565 SM00382 ATPases associated with a variety of cellular activities BLMD_20600 SM01060 BLMD_20600 BLMD_20605 SM01060 BLMD_20605 BLMD_20620 SM00656 BLMD_20620 BLMD_20630 SM00382 ATPases associated with a variety of cellular activities BLMD_20635 SM00382 ATPases associated with a variety of cellular activities BLMD_20665 SM00919 Malic enzyme, NAD binding domain BLMD_20665 SM01274 BLMD_20665 BLMD_20680 SM00870 BLMD_20680 BLMD_20685 SM00530 Helix-turn-helix XRE-family like proteins BLMD_20695 SM00448 cheY-homologous receiver domain BLMD_20695 SM00862 Transcriptional regulatory protein, C terminal BLMD_20700 SM00387 Histidine kinase-like ATPases BLMD_20705 SM00382 ATPases associated with a variety of cellular activities BLMD_20735 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_20760 SM00894 Excalibur calcium-binding domain BLMD_20815 SM00100 Cyclic nucleotide-monophosphate binding domain BLMD_20815 SM00419 helix_turn_helix, cAMP Regulatory protein BLMD_20850 SM00640 Glycosyl hydrolases family 32 BLMD_20875 SM00354 helix_turn _helix lactose operon repressor BLMD_20945 SM01060 BLMD_20945 BLMD_20950 SM00871 Bacterial transcription activator, effector binding domain BLMD_20965 SM01061 CAT RNA binding domain BLMD_20975 SM00382 ATPases associated with a variety of cellular activities BLMD_21015 SM00382 ATPases associated with a variety of cellular activities BLMD_21020 SM00387 Histidine kinase-like ATPases BLMD_21025 SM00448 cheY-homologous receiver domain BLMD_21025 SM00862 Transcriptional regulatory protein, C terminal BLMD_21055 SM00487 DEAD-like helicases superfamily BLMD_21055 SM00490 helicase superfamily c-terminal domain BLMD_21100 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BLMD_21110 SM01133 BLMD_21110 BLMD_21125 SM00267 diguanylate cyclase BLMD_21220 SM00420 helix_turn_helix, Deoxyribose operon repressor BLMD_21220 SM01134 BLMD_21220 BLMD_21240 SM00387 Histidine kinase-like ATPases BLMD_21245 SM00382 ATPases associated with a variety of cellular activities BLMD_21295 SM00899 BLMD_21295 BLMD_21310 SM00382 ATPases associated with a variety of cellular activities BLMD_21315 SM00387 Histidine kinase-like ATPases BLMD_21315 SM00388 His Kinase A (phosphoacceptor) domain BLMD_21320 SM00448 cheY-homologous receiver domain BLMD_21320 SM00862 Transcriptional regulatory protein, C terminal BLMD_21330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BLMD_21330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_21340 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BLMD_21340 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BLMD_21370 SM00354 helix_turn _helix lactose operon repressor BLMD_21390 SM00419 helix_turn_helix, cAMP Regulatory protein BLMD_21395 SM00347 helix_turn_helix multiple antibiotic resistance protein BLMD_21400 SM00450 Rhodanese Homology Domain BLMD_21410 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_21410 SM00895 BLMD_21410 BLMD_21425 SM01350 BLMD_21425 BLMD_21475 SM00387 Histidine kinase-like ATPases BLMD_21500 SM00465 GIY-YIG type nucleases (URI domain) BLMD_21510 SM00382 ATPases associated with a variety of cellular activities BLMD_21525 SM00421 helix_turn_helix, Lux Regulon BLMD_21525 SM00448 cheY-homologous receiver domain BLMD_21570 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BLMD_21575 SM00849 Metallo-beta-lactamase superfamily BLMD_21590 SM00091 PAS domain BLMD_21590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BLMD_21590 SM00387 Histidine kinase-like ATPases BLMD_21590 SM00388 His Kinase A (phosphoacceptor) domain BLMD_21595 SM00448 cheY-homologous receiver domain BLMD_21595 SM00862 Transcriptional regulatory protein, C terminal BLMD_21625 SM00788 Adenylosuccinate synthetase BLMD_21635 SM00382 ATPases associated with a variety of cellular activities BLMD_21670 SM00345 helix_turn_helix gluconate operon transcriptional repressor BLMD_21670 SM00866 BLMD_21670 BLMD_21690 SM00267 diguanylate cyclase BLMD_21760 SM00470 ParB-like nuclease domain BLMD_21780 SM00470 ParB-like nuclease domain BLMD_21790 SM01228 BLMD_21790 BLMD_21800 SM00393 Putative single-stranded nucleic acids-binding domain BLMD_21800 SM01245 BLMD_21800