locus-tag class description RSC3_00001 PF00588 SpoU rRNA Methylase family RSC3_00001 PF08032 RNA 2'-O ribose methyltransferase substrate binding RSC3_00002 PF05991 YacP-like NYN domain RSC3_00003 PF04542 Sigma-70 region 2 RSC3_00003 PF08281 Sigma-70, region 4 RSC3_00004 PF00584 SecE/Sec61-gamma subunits of protein translocation complex RSC3_00005 PF00467 KOW motif RSC3_00005 PF02357 Transcription termination factor nusG RSC3_00006 PF00298 Ribosomal protein L11, RNA binding domain RSC3_00006 PF03946 Ribosomal protein L11, N-terminal domain RSC3_00007 PF00687 Ribosomal protein L1p/L10e family RSC3_00008 PF00466 Ribosomal protein L10 RSC3_00009 PF00542 Ribosomal protein L7/L12 C-terminal domain RSC3_00009 PF16320 Ribosomal protein L7/L12 dimerisation domain RSC3_00010 PF05175 Methyltransferase small domain RSC3_00011 PF05175 Methyltransferase small domain RSC3_00012 PF04563 RNA polymerase beta subunit RSC3_00012 PF04561 RNA polymerase Rpb2, domain 2 RSC3_00012 PF04565 RNA polymerase Rpb2, domain 3 RSC3_00012 PF10385 RNA polymerase beta subunit external 1 domain RSC3_00012 PF00562 RNA polymerase Rpb2, domain 6 RSC3_00012 PF04560 RNA polymerase Rpb2, domain 7 RSC3_00013 PF04998 RNA polymerase Rpb1, domain 5 RSC3_00013 PF04983 RNA polymerase Rpb1, domain 3 RSC3_00013 PF05000 RNA polymerase Rpb1, domain 4 RSC3_00013 PF04997 RNA polymerase Rpb1, domain 1 RSC3_00013 PF00623 RNA polymerase Rpb1, domain 2 RSC3_00014 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RSC3_00015 PF00164 Ribosomal protein S12/S23 RSC3_00016 PF00177 Ribosomal protein S7p/S5e RSC3_00017 PF00679 Elongation factor G C-terminus RSC3_00017 PF14492 Elongation Factor G, domain II RSC3_00017 PF03764 Elongation factor G, domain IV RSC3_00017 PF00009 Elongation factor Tu GTP binding domain RSC3_00017 PF03144 Elongation factor Tu domain 2 RSC3_00018 PF03143 Elongation factor Tu C-terminal domain RSC3_00018 PF00009 Elongation factor Tu GTP binding domain RSC3_00018 PF03144 Elongation factor Tu domain 2 RSC3_00019 PF00338 Ribosomal protein S10p/S20e RSC3_00020 PF00297 Ribosomal protein L3 RSC3_00021 PF00573 Ribosomal protein L4/L1 family RSC3_00022 PF00276 Ribosomal protein L23 RSC3_00023 PF00181 Ribosomal Proteins L2, RNA binding domain RSC3_00023 PF03947 Ribosomal Proteins L2, C-terminal domain RSC3_00024 PF00203 Ribosomal protein S19 RSC3_00025 PF00237 Ribosomal protein L22p/L17e RSC3_00026 PF07650 KH domain RSC3_00026 PF00189 Ribosomal protein S3, C-terminal domain RSC3_00027 PF00252 Ribosomal protein L16p/L10e RSC3_00028 PF00831 Ribosomal L29 protein RSC3_00029 PF00366 Ribosomal protein S17 RSC3_00030 PF00238 Ribosomal protein L14p/L23e RSC3_00031 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 RSC3_00031 PF00467 KOW motif RSC3_00032 PF00281 Ribosomal protein L5 RSC3_00032 PF00673 ribosomal L5P family C-terminus RSC3_00033 PF00253 Ribosomal protein S14p/S29e RSC3_00034 PF00410 Ribosomal protein S8 RSC3_00035 PF00347 Ribosomal protein L6 RSC3_00036 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast RSC3_00037 PF00333 Ribosomal protein S5, N-terminal domain RSC3_00037 PF03719 Ribosomal protein S5, C-terminal domain RSC3_00038 PF00327 Ribosomal protein L30p/L7e RSC3_00039 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A RSC3_00040 PF00344 SecY translocase RSC3_00041 PF05191 Adenylate kinase, active site lid RSC3_00042 PF00557 Metallopeptidase family M24 RSC3_00044 PF01176 Translation initiation factor 1A / IF-1 RSC3_00045 PF00444 Ribosomal protein L36 RSC3_00046 PF00416 Ribosomal protein S13/S18 RSC3_00047 PF00411 Ribosomal protein S11 RSC3_00048 PF01000 RNA polymerase Rpb3/RpoA insert domain RSC3_00048 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain RSC3_00048 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain RSC3_00049 PF01196 Ribosomal protein L17 RSC3_00050 PF00005 ABC transporter RSC3_00051 PF00005 ABC transporter RSC3_00052 PF02361 Cobalt transport protein RSC3_00053 PF01416 tRNA pseudouridine synthase RSC3_00054 PF00572 Ribosomal protein L13 RSC3_00055 PF00380 Ribosomal protein S9/S16 RSC3_00056 PF05163 DinB family RSC3_00058 PF10730 Protein of unknown function (DUF2521) RSC3_00059 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_00060 PF10609 NUBPL iron-transfer P-loop NTPase RSC3_00061 PF17898 Spore germination GerD central core domain RSC3_00062 PF14089 KinB-signalling pathway activation in sporulation RSC3_00063 PF01522 Polysaccharide deacetylase RSC3_00068 PF00144 Beta-lactamase RSC3_00070 PF01758 Sodium Bile acid symporter family RSC3_00071 PF17369 Family of unknown function (DUF5391) RSC3_00072 PF02567 Phenazine biosynthesis-like protein RSC3_00073 PF07075 Protein of unknown function (DUF1343) RSC3_00074 PF00933 Glycosyl hydrolase family 3 N terminal domain RSC3_00074 PF01915 Glycosyl hydrolase family 3 C-terminal domain RSC3_00075 PF00144 Beta-lactamase RSC3_00076 PF00144 Beta-lactamase RSC3_00077 PF00367 phosphotransferase system, EIIB RSC3_00077 PF02378 Phosphotransferase system, EIIC RSC3_00078 PF01418 Helix-turn-helix domain, rpiR family RSC3_00078 PF01380 SIS domain RSC3_00079 PF01380 SIS domain RSC3_00080 PF01380 SIS domain RSC3_00081 PF04463 Protein of unknown function (DUF523) RSC3_00082 PF00491 Arginase family RSC3_00083 PF04542 Sigma-70 region 2 RSC3_00083 PF08281 Sigma-70, region 4 RSC3_00084 PF13490 Putative zinc-finger RSC3_00085 PF02457 DisA bacterial checkpoint controller nucleotide-binding RSC3_00086 PF07949 YbbR-like protein RSC3_00087 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RSC3_00087 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RSC3_00087 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RSC3_00087 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RSC3_00088 PF01380 SIS domain RSC3_00091 PF00005 ABC transporter RSC3_00092 PF00392 Bacterial regulatory proteins, gntR family RSC3_00094 PF00376 MerR family regulatory protein RSC3_00094 PF09278 MerR, DNA binding RSC3_00098 PF07690 Major Facilitator Superfamily RSC3_00100 PF00005 ABC transporter RSC3_00100 PF00664 ABC transporter transmembrane region RSC3_00101 PF01323 DSBA-like thioredoxin domain RSC3_00103 PF00005 ABC transporter RSC3_00103 PF00664 ABC transporter transmembrane region RSC3_00104 PF05139 Erythromycin esterase RSC3_00106 PF04439 Streptomycin adenylyltransferase RSC3_00108 PF13419 Haloacid dehalogenase-like hydrolase RSC3_00109 PF00324 Amino acid permease RSC3_00111 PF03600 Citrate transporter RSC3_00112 PF03401 Tripartite tricarboxylate transporter family receptor RSC3_00113 PF12431 Transcriptional regulator RSC3_00113 PF08279 HTH domain RSC3_00113 PF00072 Response regulator receiver domain RSC3_00114 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RSC3_00114 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00115 PF03466 LysR substrate binding domain RSC3_00115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00117 PF07690 Major Facilitator Superfamily RSC3_00119 PF17334 Minor curli fiber component A RSC3_00120 PF17340 Family of unknown function (DUF5370) RSC3_00122 PF03190 Protein of unknown function, DUF255 RSC3_00124 PF07109 Magnesium-protoporphyrin IX methyltransferase C-terminus RSC3_00124 PF05175 Methyltransferase small domain RSC3_00125 PF00282 Pyridoxal-dependent decarboxylase conserved domain RSC3_00126 PF00881 Nitroreductase family RSC3_00127 PF00392 Bacterial regulatory proteins, gntR family RSC3_00127 PF07729 FCD domain RSC3_00128 PF01925 Sulfite exporter TauE/SafE RSC3_00132 PF02690 Na+/Pi-cotransporter RSC3_00133 PF01895 PhoU domain RSC3_00134 PF05360 yiaA/B two helix domain RSC3_00139 PF00892 EamA-like transporter family RSC3_00140 PF02311 AraC-like ligand binding domain RSC3_00140 PF12833 Helix-turn-helix domain RSC3_00143 PF02390 Putative methyltransferase RSC3_00148 PF00465 Iron-containing alcohol dehydrogenase RSC3_00152 PF10710 Protein of unknown function (DUF2512) RSC3_00153 PF00324 Amino acid permease RSC3_00154 PF02574 Homocysteine S-methyltransferase RSC3_00155 PF04794 YdjC-like protein RSC3_00156 PF00367 phosphotransferase system, EIIB RSC3_00156 PF02378 Phosphotransferase system, EIIC RSC3_00157 PF13411 MerR HTH family regulatory protein RSC3_00157 PF07739 TipAS antibiotic-recognition domain RSC3_00158 PF04239 Protein of unknown function (DUF421) RSC3_00159 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_00163 PF10990 Protein of unknown function (DUF2809) RSC3_00164 PF01235 Sodium:alanine symporter family RSC3_00165 PF04960 Glutaminase RSC3_00166 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00167 PF08664 YcbB domain RSC3_00167 PF00072 Response regulator receiver domain RSC3_00168 PF13302 Acetyltransferase (GNAT) domain RSC3_00169 PF05569 BlaR1 peptidase M56 RSC3_00169 PF00905 Penicillin binding protein transpeptidase domain RSC3_00170 PF03965 Penicillinase repressor RSC3_00172 PF09423 PhoD-like phosphatase RSC3_00172 PF16655 PhoD-like phosphatase, N-terminal domain RSC3_00173 PF16655 PhoD-like phosphatase, N-terminal domain RSC3_00173 PF09423 PhoD-like phosphatase RSC3_00174 PF02416 mttA/Hcf106 family RSC3_00175 PF00902 Sec-independent protein translocase protein (TatC) RSC3_00176 PF00902 Sec-independent protein translocase protein (TatC) RSC3_00177 PF00701 Dihydrodipicolinate synthetase family RSC3_00178 PF00171 Aldehyde dehydrogenase family RSC3_00179 PF07690 Major Facilitator Superfamily RSC3_00180 PF07690 Major Facilitator Superfamily RSC3_00181 PF13378 Enolase C-terminal domain-like RSC3_00182 PF13378 Enolase C-terminal domain-like RSC3_00183 PF00392 Bacterial regulatory proteins, gntR family RSC3_00183 PF07729 FCD domain RSC3_00184 PF08666 SAF domain RSC3_00184 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RSC3_00188 PF00072 Response regulator receiver domain RSC3_00188 PF00486 Transcriptional regulatory protein, C terminal RSC3_00189 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00189 PF00512 His Kinase A (phospho-acceptor) domain RSC3_00190 PF00005 ABC transporter RSC3_00193 PF13037 Domain of unknown function (DUF3898) RSC3_00193 PF13039 Protein of unknown function (DUF3900) RSC3_00194 PF16226 Domain of unknown function (DUF4885) RSC3_00195 PF01636 Phosphotransferase enzyme family RSC3_00196 PF01047 MarR family RSC3_00197 PF00501 AMP-binding enzyme RSC3_00197 PF13193 AMP-binding enzyme C-terminal domain RSC3_00201 PF07739 TipAS antibiotic-recognition domain RSC3_00201 PF13411 MerR HTH family regulatory protein RSC3_00203 PF13847 Methyltransferase domain RSC3_00203 PF03551 Transcriptional regulator PadR-like family RSC3_00205 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein RSC3_00206 PF00892 EamA-like transporter family RSC3_00207 PF02810 SEC-C motif RSC3_00207 PF05225 helix-turn-helix, Psq domain RSC3_00208 PF00005 ABC transporter RSC3_00211 PF00072 Response regulator receiver domain RSC3_00211 PF00486 Transcriptional regulatory protein, C terminal RSC3_00212 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00212 PF00512 His Kinase A (phospho-acceptor) domain RSC3_00213 PF03466 LysR substrate binding domain RSC3_00213 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00214 PF14552 Tautomerase enzyme RSC3_00217 PF17118 Domain of unknown function (DUF5105) RSC3_00217 PF11611 Domain of unknown function (DUF4352) RSC3_00218 PF03606 C4-dicarboxylate anaerobic carrier RSC3_00220 PF17763 Glutaminase/Asparaginase C-terminal domain RSC3_00220 PF00710 Asparaginase, N-terminal RSC3_00221 PF00583 Acetyltransferase (GNAT) family RSC3_00222 PF01425 Amidase RSC3_00223 PF08439 Oligopeptidase F RSC3_00223 PF01432 Peptidase family M3 RSC3_00224 PF04226 Transglycosylase associated protein RSC3_00226 PF13183 4Fe-4S dicluster domain RSC3_00226 PF02754 Cysteine-rich domain RSC3_00227 PF01565 FAD binding domain RSC3_00227 PF02913 FAD linked oxidases, C-terminal domain RSC3_00228 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_00229 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RSC3_00230 PF02378 Phosphotransferase system, EIIC RSC3_00231 PF02056 Family 4 glycosyl hydrolase RSC3_00231 PF11975 Family 4 glycosyl hydrolase C-terminal domain RSC3_00232 PF00392 Bacterial regulatory proteins, gntR family RSC3_00232 PF07702 UTRA domain RSC3_00233 PF04794 YdjC-like protein RSC3_00234 PF00704 Glycosyl hydrolases family 18 RSC3_00234 PF00041 Fibronectin type III domain RSC3_00235 PF00704 Glycosyl hydrolases family 18 RSC3_00235 PF06483 Chitinase C RSC3_00236 PF00089 Trypsin RSC3_00239 PF16244 Domain of unknown function (DUF4901) RSC3_00240 PF00581 Rhodanese-like domain RSC3_00241 PF07486 Cell Wall Hydrolase RSC3_00242 PF00296 Luciferase-like monooxygenase RSC3_00243 PF00296 Luciferase-like monooxygenase RSC3_00244 PF00877 NlpC/P60 family RSC3_00245 PF00877 NlpC/P60 family RSC3_00247 PF13732 Domain of unknown function (DUF4162) RSC3_00247 PF00005 ABC transporter RSC3_00248 PF17932 Tetracyclin repressor-like, C-terminal domain RSC3_00248 PF00440 Bacterial regulatory proteins, tetR family RSC3_00252 PF02342 TerD domain RSC3_00253 PF02342 TerD domain RSC3_00254 PF02342 TerD domain RSC3_00255 PF03741 Integral membrane protein TerC family RSC3_00258 PF14266 Putative component of 'biosynthetic module' RSC3_00259 PF05816 Toxic anion resistance protein (TelA) RSC3_00260 PF02683 Cytochrome C biogenesis protein transmembrane region RSC3_00262 PF07690 Major Facilitator Superfamily RSC3_00264 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RSC3_00264 PF00056 lactate/malate dehydrogenase, NAD binding domain RSC3_00265 PF02652 L-lactate permease RSC3_00266 PF01810 LysE type translocator RSC3_00267 PF00324 Amino acid permease RSC3_00268 PF00324 Amino acid permease RSC3_00269 PF02540 NAD synthase RSC3_00270 PF01202 Shikimate kinase RSC3_00271 PF01202 Shikimate kinase RSC3_00272 PF10127 RNA repair pathway DNA polymerase beta family RSC3_00273 PF01619 Proline dehydrogenase RSC3_00274 PF00171 Aldehyde dehydrogenase family RSC3_00275 PF00171 Aldehyde dehydrogenase family RSC3_00276 PF00474 Sodium:solute symporter family RSC3_00277 PF13556 PucR C-terminal helix-turn-helix domain RSC3_00277 PF17853 GGDEF-like domain RSC3_00278 PF09323 Domain of unknown function (DUF1980) RSC3_00279 PF03773 Predicted permease RSC3_00280 PF05448 Acetyl xylan esterase (AXE1) RSC3_00284 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00285 PF00497 Bacterial extracellular solute-binding proteins, family 3 RSC3_00286 PF02525 Flavodoxin-like fold RSC3_00287 PF00005 ABC transporter RSC3_00288 PF00232 Glycosyl hydrolase family 1 RSC3_00289 PF11033 Competence protein J (ComJ) RSC3_00290 PF14040 Deoxyribonuclease NucA/NucB RSC3_00292 PF03793 PASTA domain RSC3_00292 PF00069 Protein kinase domain RSC3_00293 PF04740 LXG domain of WXG superfamily RSC3_00293 PF14449 Pre-toxin TG RSC3_00293 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues RSC3_00294 PF05378 Hydantoinase/oxoprolinase N-terminal region RSC3_00294 PF01968 Hydantoinase/oxoprolinase RSC3_00295 PF02538 Hydantoinase B/oxoprolinase RSC3_00297 PF00005 ABC transporter RSC3_00297 PF08402 TOBE domain RSC3_00298 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00299 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00300 PF00550 Phosphopantetheine attachment site RSC3_00300 PF00668 Condensation domain RSC3_00300 PF13193 AMP-binding enzyme C-terminal domain RSC3_00300 PF00501 AMP-binding enzyme RSC3_00301 PF00668 Condensation domain RSC3_00301 PF13193 AMP-binding enzyme C-terminal domain RSC3_00301 PF00501 AMP-binding enzyme RSC3_00301 PF00550 Phosphopantetheine attachment site RSC3_00302 PF00550 Phosphopantetheine attachment site RSC3_00302 PF13193 AMP-binding enzyme C-terminal domain RSC3_00302 PF00668 Condensation domain RSC3_00302 PF00501 AMP-binding enzyme RSC3_00303 PF00501 AMP-binding enzyme RSC3_00303 PF13193 AMP-binding enzyme C-terminal domain RSC3_00303 PF00668 Condensation domain RSC3_00303 PF00550 Phosphopantetheine attachment site RSC3_00304 PF00501 AMP-binding enzyme RSC3_00304 PF13193 AMP-binding enzyme C-terminal domain RSC3_00304 PF00668 Condensation domain RSC3_00304 PF00550 Phosphopantetheine attachment site RSC3_00304 PF00975 Thioesterase domain RSC3_00305 PF00501 AMP-binding enzyme RSC3_00305 PF13193 AMP-binding enzyme C-terminal domain RSC3_00305 PF00668 Condensation domain RSC3_00305 PF00550 Phosphopantetheine attachment site RSC3_00305 PF00975 Thioesterase domain RSC3_00306 PF00975 Thioesterase domain RSC3_00307 PF00892 EamA-like transporter family RSC3_00308 PF00155 Aminotransferase class I and II RSC3_00308 PF00392 Bacterial regulatory proteins, gntR family RSC3_00309 PF01648 4'-phosphopantetheinyl transferase superfamily RSC3_00310 PF00756 Putative esterase RSC3_00311 PF06445 GyrI-like small molecule binding domain RSC3_00311 PF12833 Helix-turn-helix domain RSC3_00319 PF02743 Cache domain RSC3_00319 PF00672 HAMP domain RSC3_00319 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_00320 PF00005 ABC transporter RSC3_00321 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00322 PF00497 Bacterial extracellular solute-binding proteins, family 3 RSC3_00323 PF02954 Bacterial regulatory protein, Fis family RSC3_00323 PF00158 Sigma-54 interaction domain RSC3_00323 PF13426 PAS domain RSC3_00324 PF00202 Aminotransferase class-III RSC3_00325 PF00324 Amino acid permease RSC3_00326 PF00491 Arginase family RSC3_00327 PF00491 Arginase family RSC3_00328 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00328 PF03466 LysR substrate binding domain RSC3_00329 PF02441 Flavoprotein RSC3_00330 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase RSC3_00341 PF04740 LXG domain of WXG superfamily RSC3_00341 PF14449 Pre-toxin TG RSC3_00346 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00346 PF06580 Histidine kinase RSC3_00347 PF12833 Helix-turn-helix domain RSC3_00347 PF00072 Response regulator receiver domain RSC3_00348 PF13407 Periplasmic binding protein domain RSC3_00349 PF00005 ABC transporter RSC3_00350 PF02653 Branched-chain amino acid transport system / permease component RSC3_00351 PF07690 Major Facilitator Superfamily RSC3_00352 PF01047 MarR family RSC3_00352 PF00583 Acetyltransferase (GNAT) family RSC3_00353 PF08532 Beta-galactosidase trimerisation domain RSC3_00353 PF08533 Beta-galactosidase C-terminal domain RSC3_00353 PF02449 Beta-galactosidase RSC3_00354 PF02333 Phytase RSC3_00357 PF00854 POT family RSC3_00358 PF12708 Pectate lyase superfamily protein RSC3_00358 PF13229 Right handed beta helix region RSC3_00360 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_00361 PF05504 Spore germination B3/ GerAC like, C-terminal RSC3_00362 PF03845 Spore germination protein RSC3_00364 PF13411 MerR HTH family regulatory protein RSC3_00364 PF07739 TipAS antibiotic-recognition domain RSC3_00365 PF00005 ABC transporter RSC3_00366 PF02687 FtsX-like permease family RSC3_00366 PF12704 MacB-like periplasmic core domain RSC3_00367 PF00486 Transcriptional regulatory protein, C terminal RSC3_00367 PF00072 Response regulator receiver domain RSC3_00368 PF00512 His Kinase A (phospho-acceptor) domain RSC3_00368 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00368 PF00672 HAMP domain RSC3_00369 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_00369 PF00672 HAMP domain RSC3_00369 PF12729 Four helix bundle sensory module for signal transduction RSC3_00370 PF13840 ACT domain RSC3_00370 PF00696 Amino acid kinase family RSC3_00372 PF01032 FecCD transport family RSC3_00373 PF01032 FecCD transport family RSC3_00374 PF00005 ABC transporter RSC3_00375 PF01497 Periplasmic binding protein RSC3_00376 PF07690 Major Facilitator Superfamily RSC3_00377 PF00440 Bacterial regulatory proteins, tetR family RSC3_00379 PF00881 Nitroreductase family RSC3_00380 PF03992 Antibiotic biosynthesis monooxygenase RSC3_00381 PF01022 Bacterial regulatory protein, arsR family RSC3_00382 PF00155 Aminotransferase class I and II RSC3_00382 PF00392 Bacterial regulatory proteins, gntR family RSC3_00383 PF00202 Aminotransferase class-III RSC3_00384 PF13520 Amino acid permease RSC3_00386 PF13520 Amino acid permease RSC3_00387 PF00171 Aldehyde dehydrogenase family RSC3_00388 PF00892 EamA-like transporter family RSC3_00390 PF07987 Domain of unkown function (DUF1775) RSC3_00391 PF04234 CopC domain RSC3_00391 PF05425 Copper resistance protein D RSC3_00391 PF13115 YtkA-like RSC3_00392 PF08220 DeoR-like helix-turn-helix domain RSC3_00392 PF05573 NosL RSC3_00393 PF18267 Rubredoxin NAD+ reductase C-terminal domain RSC3_00393 PF04324 BFD-like [2Fe-2S] binding domain RSC3_00393 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_00393 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RSC3_00394 PF04324 BFD-like [2Fe-2S] binding domain RSC3_00394 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_00394 PF18267 Rubredoxin NAD+ reductase C-terminal domain RSC3_00394 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RSC3_00395 PF00384 Molybdopterin oxidoreductase RSC3_00395 PF01568 Molydopterin dinucleotide binding domain RSC3_00395 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RSC3_00396 PF18267 Rubredoxin NAD+ reductase C-terminal domain RSC3_00396 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RSC3_00396 PF04324 BFD-like [2Fe-2S] binding domain RSC3_00396 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_00396 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RSC3_00397 PF00355 Rieske [2Fe-2S] domain RSC3_00398 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RSC3_00399 PF00392 Bacterial regulatory proteins, gntR family RSC3_00399 PF07729 FCD domain RSC3_00400 PF00939 Sodium:sulfate symporter transmembrane region RSC3_00401 PF00939 Sodium:sulfate symporter transmembrane region RSC3_00402 PF07977 FabA-like domain RSC3_00403 PF01980 tRNA-methyltransferase O RSC3_00404 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_00407 PF00456 Transketolase, thiamine diphosphate binding domain RSC3_00408 PF02779 Transketolase, pyrimidine binding domain RSC3_00408 PF02780 Transketolase, C-terminal domain RSC3_00410 PF03746 LamB/YcsF family RSC3_00411 PF01566 Natural resistance-associated macrophage protein RSC3_00412 PF07286 Protein of unknown function (DUF1445) RSC3_00413 PF02682 Carboxyltransferase domain, subdomain C and D RSC3_00414 PF02626 Carboxyltransferase domain, subdomain A and B RSC3_00415 PF02626 Carboxyltransferase domain, subdomain A and B RSC3_00416 PF09339 IclR helix-turn-helix domain RSC3_00416 PF01614 Bacterial transcriptional regulator RSC3_00417 PF13472 GDSL-like Lipase/Acylhydrolase family RSC3_00418 PF02378 Phosphotransferase system, EIIC RSC3_00418 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_00419 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_00420 PF08125 Mannitol dehydrogenase C-terminal domain RSC3_00420 PF01232 Mannitol dehydrogenase Rossmann domain RSC3_00421 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_00421 PF05043 Mga helix-turn-helix domain RSC3_00421 PF08279 HTH domain RSC3_00421 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_00421 PF00874 PRD domain RSC3_00422 PF08279 HTH domain RSC3_00422 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_00422 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_00422 PF05043 Mga helix-turn-helix domain RSC3_00422 PF00874 PRD domain RSC3_00426 PF16242 Pyridoxamine 5'-phosphate oxidase like RSC3_00427 PF10997 Alternate to MurJ RSC3_00428 PF03816 Cell envelope-related transcriptional attenuator domain RSC3_00429 PF12823 Domain of unknown function (DUF3817) RSC3_00431 PF01037 Lrp/AsnC ligand binding domain RSC3_00432 PF01751 Toprim domain RSC3_00432 PF01131 DNA topoisomerase RSC3_00433 PF01751 Toprim domain RSC3_00433 PF01131 DNA topoisomerase RSC3_00434 PF01131 DNA topoisomerase RSC3_00434 PF01751 Toprim domain RSC3_00435 PF02153 Prephenate dehydrogenase RSC3_00436 PF04715 Anthranilate synthase component I, N terminal region RSC3_00436 PF00425 chorismate binding enzyme RSC3_00436 PF00117 Glutamine amidotransferase class-I RSC3_00437 PF01817 Chorismate mutase type II RSC3_00438 PF00205 Thiamine pyrophosphate enzyme, central domain RSC3_00438 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RSC3_00438 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RSC3_00439 PF18416 N-acetylglucosamine binding protein domain 2 RSC3_00439 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading RSC3_00441 PF13302 Acetyltransferase (GNAT) domain RSC3_00442 PF01566 Natural resistance-associated macrophage protein RSC3_00443 PF04226 Transglycosylase associated protein RSC3_00444 PF10415 Fumarase C C-terminus RSC3_00444 PF00206 Lyase RSC3_00445 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RSC3_00446 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) RSC3_00447 PF12787 EcsC protein family RSC3_00449 PF07883 Cupin domain RSC3_00451 PF01594 AI-2E family transporter RSC3_00452 PF00375 Sodium:dicarboxylate symporter family RSC3_00453 PF00005 ABC transporter RSC3_00456 PF08028 Acyl-CoA dehydrogenase, C-terminal domain RSC3_00456 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_00456 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_00457 PF13040 Fur-regulated basic protein B RSC3_00459 PF00085 Thioredoxin RSC3_00460 PF07478 D-ala D-ala ligase C-terminus RSC3_00460 PF01820 D-ala D-ala ligase N-terminus RSC3_00461 PF07478 D-ala D-ala ligase C-terminus RSC3_00461 PF01820 D-ala D-ala ligase N-terminus RSC3_00462 PF01225 Mur ligase family, catalytic domain RSC3_00462 PF02875 Mur ligase family, glutamate ligase domain RSC3_00462 PF08245 Mur ligase middle domain RSC3_00463 PF12146 Serine aminopeptidase, S33 RSC3_00464 PF00271 Helicase conserved C-terminal domain RSC3_00464 PF00270 DEAD/DEAH box helicase RSC3_00465 PF03703 Bacterial PH domain RSC3_00466 PF03703 Bacterial PH domain RSC3_00467 PF01694 Rhomboid family RSC3_00469 PF00842 Alanine racemase, C-terminal domain RSC3_00469 PF01168 Alanine racemase, N-terminal domain RSC3_00470 PF01402 Ribbon-helix-helix protein, copG family RSC3_00471 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system RSC3_00472 PF08678 Rsbr N terminal RSC3_00472 PF01740 STAS domain RSC3_00473 PF01740 STAS domain RSC3_00474 PF13581 Histidine kinase-like ATPase domain RSC3_00475 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain RSC3_00475 PF07228 Stage II sporulation protein E (SpoIIE) RSC3_00476 PF01740 STAS domain RSC3_00477 PF13581 Histidine kinase-like ATPase domain RSC3_00478 PF04545 Sigma-70, region 4 RSC3_00478 PF04539 Sigma-70 region 3 RSC3_00478 PF04542 Sigma-70 region 2 RSC3_00479 PF07228 Stage II sporulation protein E (SpoIIE) RSC3_00480 PF17674 HHH domain RSC3_00480 PF00575 S1 RNA binding domain RSC3_00480 PF09371 Tex-like protein N-terminal domain RSC3_00480 PF16921 Tex protein YqgF-like domain RSC3_00482 PF00440 Bacterial regulatory proteins, tetR family RSC3_00484 PF03176 MMPL family RSC3_00485 PF10263 SprT-like family RSC3_00489 PF01022 Bacterial regulatory protein, arsR family RSC3_00490 PF02040 Arsenical pump membrane protein RSC3_00491 PF02040 Arsenical pump membrane protein RSC3_00492 PF01451 Low molecular weight phosphotyrosine protein phosphatase RSC3_00493 PF00457 Glycosyl hydrolases family 11 RSC3_00494 PF00487 Fatty acid desaturase RSC3_00495 PF00313 'Cold-shock' DNA-binding domain RSC3_00498 PF00392 Bacterial regulatory proteins, gntR family RSC3_00498 PF00155 Aminotransferase class I and II RSC3_00499 PF07690 Major Facilitator Superfamily RSC3_00502 PF01047 MarR family RSC3_00503 PF00583 Acetyltransferase (GNAT) family RSC3_00504 PF04299 Putative FMN-binding domain RSC3_00505 PF04299 Putative FMN-binding domain RSC3_00507 PF01638 HxlR-like helix-turn-helix RSC3_00508 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_00508 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_00510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00510 PF03466 LysR substrate binding domain RSC3_00512 PF06821 Serine hydrolase RSC3_00513 PF01638 HxlR-like helix-turn-helix RSC3_00516 PF04199 Putative cyclase RSC3_00518 PF00324 Amino acid permease RSC3_00519 PF00324 Amino acid permease RSC3_00521 PF08859 DGC domain RSC3_00522 PF00561 alpha/beta hydrolase fold RSC3_00525 PF04542 Sigma-70 region 2 RSC3_00525 PF08281 Sigma-70, region 4 RSC3_00526 PF11738 Protein of unknown function (DUF3298) RSC3_00526 PF13739 Deacetylase PdaC RSC3_00527 PF01757 Acyltransferase family RSC3_00528 PF00293 NUDIX domain RSC3_00529 PF07690 Major Facilitator Superfamily RSC3_00530 PF00465 Iron-containing alcohol dehydrogenase RSC3_00531 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00531 PF06580 Histidine kinase RSC3_00532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00532 PF06580 Histidine kinase RSC3_00533 PF00072 Response regulator receiver domain RSC3_00533 PF04397 LytTr DNA-binding domain RSC3_00534 PF17961 Bacterial Ig domain RSC3_00534 PF00746 LPXTG cell wall anchor motif RSC3_00534 PF17210 SdrD B-like domain RSC3_00534 PF10425 C-terminus of bacterial fibrinogen-binding adhesin RSC3_00534 PF04650 YSIRK type signal peptide RSC3_00535 PF04203 Sortase domain RSC3_00536 PF00083 Sugar (and other) transporter RSC3_00542 PF00586 AIR synthase related protein, N-terminal domain RSC3_00542 PF02769 AIR synthase related protein, C-terminal domain RSC3_00543 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE RSC3_00544 PF00814 Glycoprotease family RSC3_00545 PF00583 Acetyltransferase (GNAT) family RSC3_00546 PF00814 Glycoprotease family RSC3_00547 PF16326 ABC transporter C-terminal domain RSC3_00547 PF00005 ABC transporter RSC3_00547 PF12848 ABC transporter RSC3_00549 PF01967 MoaC family RSC3_00550 PF06971 Putative DNA-binding protein N-terminus RSC3_00550 PF02629 CoA binding domain RSC3_00551 PF02416 mttA/Hcf106 family RSC3_00552 PF00902 Sec-independent protein translocase protein (TatC) RSC3_00553 PF14146 Domain of unknown function (DUF4305) RSC3_00554 PF02517 CPBP intramembrane metalloprotease RSC3_00555 PF00166 Chaperonin 10 Kd subunit RSC3_00556 PF00118 TCP-1/cpn60 chaperonin family RSC3_00561 PF04294 VanW like protein RSC3_00562 PF10787 Uncharacterised protein from bacillus cereus group RSC3_00565 PF02586 SOS response associated peptidase (SRAP) RSC3_00567 PF00440 Bacterial regulatory proteins, tetR family RSC3_00567 PF17933 Tetracyclin repressor-like, C-terminal domain RSC3_00568 PF00391 PEP-utilising enzyme, mobile domain RSC3_00568 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RSC3_00570 PF04343 Protein of unknown function, DUF488 RSC3_00571 PF00106 short chain dehydrogenase RSC3_00572 PF00135 Carboxylesterase family RSC3_00573 PF07690 Major Facilitator Superfamily RSC3_00574 PF04012 PspA/IM30 family RSC3_00575 PF08271 TFIIB zinc-binding RSC3_00576 PF04536 TPM domain RSC3_00577 PF13421 SPFH domain-Band 7 family RSC3_00580 PF11495 Archaeal transcriptional regulator TrmB RSC3_00580 PF01978 Sugar-specific transcriptional regulator TrmB RSC3_00581 PF01810 LysE type translocator RSC3_00582 PF01810 LysE type translocator RSC3_00583 PF06803 Protein of unknown function (DUF1232) RSC3_00585 PF01098 Cell cycle protein RSC3_00586 PF01098 Cell cycle protein RSC3_00592 PF13739 Deacetylase PdaC RSC3_00592 PF01522 Polysaccharide deacetylase RSC3_00592 PF11738 Protein of unknown function (DUF3298) RSC3_00593 PF09154 Domain of unknown function (DUF1939) RSC3_00593 PF00128 Alpha amylase, catalytic domain RSC3_00594 PF09154 Domain of unknown function (DUF1939) RSC3_00594 PF00128 Alpha amylase, catalytic domain RSC3_00595 PF00356 Bacterial regulatory proteins, lacI family RSC3_00596 PF00356 Bacterial regulatory proteins, lacI family RSC3_00597 PF00128 Alpha amylase, catalytic domain RSC3_00597 PF02903 Alpha amylase, N-terminal ig-like domain RSC3_00598 PF13416 Bacterial extracellular solute-binding protein RSC3_00599 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00600 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00601 PF06691 Protein of unknown function (DUF1189) RSC3_00602 PF03633 Glycosyl hydrolase family 65, C-terminal domain RSC3_00602 PF03632 Glycosyl hydrolase family 65 central catalytic domain RSC3_00602 PF03636 Glycosyl hydrolase family 65, N-terminal domain RSC3_00603 PF16657 Maltogenic Amylase, C-terminal domain RSC3_00603 PF00128 Alpha amylase, catalytic domain RSC3_00604 PF13419 Haloacid dehalogenase-like hydrolase RSC3_00605 PF01479 S4 domain RSC3_00605 PF00579 tRNA synthetases class I (W and Y) RSC3_00606 PF01047 MarR family RSC3_00609 PF03330 Lytic transglycolase RSC3_00610 PF07676 WD40-like Beta Propeller Repeat RSC3_00611 PF07676 WD40-like Beta Propeller Repeat RSC3_00612 PF13170 Protein of unknown function (DUF4003) RSC3_00614 PF10502 Signal peptidase, peptidase S26 RSC3_00616 PF13460 NAD(P)H-binding RSC3_00617 PF12833 Helix-turn-helix domain RSC3_00618 PF07731 Multicopper oxidase RSC3_00618 PF00394 Multicopper oxidase RSC3_00618 PF07732 Multicopper oxidase RSC3_00622 PF16916 Dimerisation domain of Zinc Transporter RSC3_00622 PF01545 Cation efflux family RSC3_00623 PF07726 ATPase family associated with various cellular activities (AAA) RSC3_00623 PF17863 AAA lid domain RSC3_00624 PF01882 Protein of unknown function DUF58 RSC3_00625 PF11992 Domain of unknown function (DUF3488) RSC3_00625 PF13559 Domain of unknown function (DUF4129) RSC3_00625 PF01841 Transglutaminase-like superfamily RSC3_00626 PF02540 NAD synthase RSC3_00626 PF00117 Glutamine amidotransferase class-I RSC3_00626 PF00958 GMP synthase C terminal domain RSC3_00628 PF00860 Permease family RSC3_00630 PF13076 Fur-regulated basic protein A RSC3_00631 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_00632 PF14044 NETI protein RSC3_00633 PF00731 AIR carboxylase RSC3_00634 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain RSC3_00634 PF02222 ATP-grasp domain RSC3_00635 PF10397 Adenylosuccinate lyase C-terminus RSC3_00635 PF00206 Lyase RSC3_00636 PF01259 SAICAR synthetase RSC3_00637 PF01259 SAICAR synthetase RSC3_00638 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase RSC3_00641 PF00586 AIR synthase related protein, N-terminal domain RSC3_00641 PF02769 AIR synthase related protein, C-terminal domain RSC3_00641 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain RSC3_00642 PF00156 Phosphoribosyl transferase domain RSC3_00643 PF00586 AIR synthase related protein, N-terminal domain RSC3_00643 PF02769 AIR synthase related protein, C-terminal domain RSC3_00644 PF00551 Formyl transferase RSC3_00645 PF01808 AICARFT/IMPCHase bienzyme RSC3_00645 PF02142 MGS-like domain RSC3_00646 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain RSC3_00646 PF02843 Phosphoribosylglycinamide synthetase, C domain RSC3_00646 PF02844 Phosphoribosylglycinamide synthetase, N domain RSC3_00648 PF00067 Cytochrome P450 RSC3_00653 PF11127 Protein of unknown function (DUF2892) RSC3_00654 PF13382 Adenine deaminase C-terminal domain RSC3_00654 PF01979 Amidohydrolase family RSC3_00655 PF17479 Protein of unknown function (DUF3048) C-terminal domain RSC3_00655 PF11258 Protein of unknown function (DUF3048) N-terminal domain RSC3_00656 PF01371 Trp repressor protein RSC3_00657 PF01884 PcrB family RSC3_00658 PF00580 UvrD/REP helicase N-terminal domain RSC3_00658 PF13361 UvrD-like helicase C-terminal domain RSC3_00659 PF12826 Helix-hairpin-helix motif RSC3_00659 PF03120 NAD-dependent DNA ligase OB-fold domain RSC3_00659 PF03119 NAD-dependent DNA ligase C4 zinc finger domain RSC3_00659 PF00533 BRCA1 C Terminus (BRCT) domain RSC3_00659 PF01653 NAD-dependent DNA ligase adenylation domain RSC3_00660 PF07537 CamS sex pheromone cAM373 precursor RSC3_00661 PF14502 Helix-turn-helix domain RSC3_00661 PF14503 YhfZ C-terminal domain RSC3_00663 PF10941 Protein of unknown function DUF2620 RSC3_00664 PF10797 Protein of unknown function RSC3_00665 PF02126 Phosphotriesterase family RSC3_00667 PF00155 Aminotransferase class I and II RSC3_00668 PF01676 Metalloenzyme superfamily RSC3_00669 PF01168 Alanine racemase, N-terminal domain RSC3_00670 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RSC3_00671 PF02308 MgtC family RSC3_00672 PF00474 Sodium:solute symporter family RSC3_00673 PF02686 Glu-tRNAGln amidotransferase C subunit RSC3_00674 PF01425 Amidase RSC3_00675 PF02637 GatB domain RSC3_00675 PF02934 GatB/GatE catalytic domain RSC3_00676 PF02637 GatB domain RSC3_00676 PF02934 GatB/GatE catalytic domain RSC3_00679 PF02156 Glycosyl hydrolase family 26 RSC3_00680 PF00440 Bacterial regulatory proteins, tetR family RSC3_00681 PF00440 Bacterial regulatory proteins, tetR family RSC3_00682 PF00873 AcrB/AcrD/AcrF family RSC3_00684 PF13302 Acetyltransferase (GNAT) domain RSC3_00685 PF01156 Inosine-uridine preferring nucleoside hydrolase RSC3_00686 PF00781 Diacylglycerol kinase catalytic domain RSC3_00687 PF01938 TRAM domain RSC3_00687 PF05958 tRNA (Uracil-5-)-methyltransferase RSC3_00693 PF00145 C-5 cytosine-specific DNA methylase RSC3_00694 PF00232 Glycosyl hydrolase family 1 RSC3_00695 PF03123 CAT RNA binding domain RSC3_00695 PF00874 PRD domain RSC3_00696 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_00699 PF13087 AAA domain RSC3_00699 PF13091 PLD-like domain RSC3_00701 PF00892 EamA-like transporter family RSC3_00702 PF00155 Aminotransferase class I and II RSC3_00702 PF00392 Bacterial regulatory proteins, gntR family RSC3_00703 PF00892 EamA-like transporter family RSC3_00704 PF01709 Transcriptional regulator RSC3_00710 PF00171 Aldehyde dehydrogenase family RSC3_00711 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_00712 PF01040 UbiA prenyltransferase family RSC3_00713 PF00440 Bacterial regulatory proteins, tetR family RSC3_00714 PF00939 Sodium:sulfate symporter transmembrane region RSC3_00715 PF00939 Sodium:sulfate symporter transmembrane region RSC3_00716 PF00005 ABC transporter RSC3_00716 PF16326 ABC transporter C-terminal domain RSC3_00716 PF12848 ABC transporter RSC3_00717 PF03466 LysR substrate binding domain RSC3_00717 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00719 PF02649 Type I GTP cyclohydrolase folE2 RSC3_00720 PF02649 Type I GTP cyclohydrolase folE2 RSC3_00724 PF02492 CobW/HypB/UreG, nucleotide-binding domain RSC3_00724 PF07683 Cobalamin synthesis protein cobW C-terminal domain RSC3_00725 PF03744 6-carboxyhexanoate--CoA ligase RSC3_00726 PF00202 Aminotransferase class-III RSC3_00727 PF00155 Aminotransferase class I and II RSC3_00729 PF06968 Biotin and Thiamin Synthesis associated domain RSC3_00729 PF04055 Radical SAM superfamily RSC3_00730 PF00067 Cytochrome P450 RSC3_00732 PF13411 MerR HTH family regulatory protein RSC3_00733 PF07690 Major Facilitator Superfamily RSC3_00734 PF07690 Major Facilitator Superfamily RSC3_00735 PF12848 ABC transporter RSC3_00735 PF00005 ABC transporter RSC3_00736 PF00270 DEAD/DEAH box helicase RSC3_00736 PF00271 Helicase conserved C-terminal domain RSC3_00737 PF16884 N-terminal domain of oxidoreductase RSC3_00737 PF00107 Zinc-binding dehydrogenase RSC3_00738 PF11486 Protein of unknown function (DUF3212) RSC3_00739 PF11181 Heat induced stress protein YflT RSC3_00740 PF00939 Sodium:sulfate symporter transmembrane region RSC3_00742 PF00005 ABC transporter RSC3_00746 PF00753 Metallo-beta-lactamase superfamily RSC3_00748 PF02898 Nitric oxide synthase, oxygenase domain RSC3_00749 PF00704 Glycosyl hydrolases family 18 RSC3_00750 PF13630 SdpI/YhfL protein family RSC3_00750 PF07853 Protein of unknown function (DUF1648) RSC3_00751 PF01022 Bacterial regulatory protein, arsR family RSC3_00752 PF00708 Acylphosphatase RSC3_00753 PF03473 MOSC domain RSC3_00753 PF03475 3-alpha domain RSC3_00754 PF11121 Protein of unknown function (DUF2639) RSC3_00756 PF00557 Metallopeptidase family M24 RSC3_00757 PF00884 Sulfatase RSC3_00758 PF09350 Domain of unknown function (DUF1992) RSC3_00759 PF01235 Sodium:alanine symporter family RSC3_00760 PF00367 phosphotransferase system, EIIB RSC3_00760 PF02378 Phosphotransferase system, EIIC RSC3_00761 PF16657 Maltogenic Amylase, C-terminal domain RSC3_00761 PF00128 Alpha amylase, catalytic domain RSC3_00762 PF00392 Bacterial regulatory proteins, gntR family RSC3_00762 PF07702 UTRA domain RSC3_00763 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_00769 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RSC3_00770 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_00771 PF16363 GDP-mannose 4,6 dehydratase RSC3_00773 PF00535 Glycosyl transferase family 2 RSC3_00774 PF00535 Glycosyl transferase family 2 RSC3_00774 PF13181 Tetratricopeptide repeat RSC3_00775 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RSC3_00776 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_00776 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_00777 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RSC3_00777 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RSC3_00777 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RSC3_00779 PF01638 HxlR-like helix-turn-helix RSC3_00780 PF00881 Nitroreductase family RSC3_00781 PF02872 5'-nucleotidase, C-terminal domain RSC3_00781 PF00149 Calcineurin-like phosphoesterase RSC3_00782 PF01965 DJ-1/PfpI family RSC3_00783 PF06569 Protein of unknown function (DUF1128) RSC3_00784 PF01235 Sodium:alanine symporter family RSC3_00785 PF01451 Low molecular weight phosphotyrosine protein phosphatase RSC3_00787 PF03631 Virulence factor BrkB RSC3_00789 PF07690 Major Facilitator Superfamily RSC3_00791 PF01699 Sodium/calcium exchanger protein RSC3_00792 PF14167 YfkD-like protein RSC3_00793 PF04055 Radical SAM superfamily RSC3_00793 PF08756 YfkB-like domain RSC3_00795 PF01522 Polysaccharide deacetylase RSC3_00796 PF00465 Iron-containing alcohol dehydrogenase RSC3_00798 PF01544 CorA-like Mg2+ transporter protein RSC3_00799 PF00730 HhH-GPD superfamily base excision DNA repair protein RSC3_00800 PF05958 tRNA (Uracil-5-)-methyltransferase RSC3_00800 PF01938 TRAM domain RSC3_00801 PF01938 TRAM domain RSC3_00801 PF05958 tRNA (Uracil-5-)-methyltransferase RSC3_00807 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase RSC3_00808 PF10925 Protein of unknown function (DUF2680) RSC3_00809 PF07690 Major Facilitator Superfamily RSC3_00811 PF00367 phosphotransferase system, EIIB RSC3_00811 PF02378 Phosphotransferase system, EIIC RSC3_00812 PF03123 CAT RNA binding domain RSC3_00812 PF00874 PRD domain RSC3_00814 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) RSC3_00815 PF00361 Proton-conducting membrane transporter RSC3_00815 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RSC3_00816 PF10057 Uncharacterized conserved protein (DUF2294) RSC3_00818 PF00676 Dehydrogenase E1 component RSC3_00819 PF02779 Transketolase, pyrimidine binding domain RSC3_00819 PF02780 Transketolase, C-terminal domain RSC3_00820 PF02817 e3 binding domain RSC3_00820 PF00364 Biotin-requiring enzyme RSC3_00820 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RSC3_00821 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RSC3_00821 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_00822 PF00158 Sigma-54 interaction domain RSC3_00822 PF02954 Bacterial regulatory protein, Fis family RSC3_00822 PF01590 GAF domain RSC3_00823 PF02694 Uncharacterised BCR, YnfA/UPF0060 family RSC3_00824 PF02056 Family 4 glycosyl hydrolase RSC3_00824 PF11975 Family 4 glycosyl hydrolase C-terminal domain RSC3_00825 PF01380 SIS domain RSC3_00825 PF01418 Helix-turn-helix domain, rpiR family RSC3_00826 PF02378 Phosphotransferase system, EIIC RSC3_00826 PF00367 phosphotransferase system, EIIB RSC3_00830 PF01638 HxlR-like helix-turn-helix RSC3_00831 PF07681 DoxX RSC3_00832 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_00833 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain RSC3_00833 PF04616 Glycosyl hydrolases family 43 RSC3_00834 PF04616 Glycosyl hydrolases family 43 RSC3_00834 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain RSC3_00835 PF02311 AraC-like ligand binding domain RSC3_00835 PF12833 Helix-turn-helix domain RSC3_00836 PF13416 Bacterial extracellular solute-binding protein RSC3_00837 PF02525 Flavodoxin-like fold RSC3_00838 PF00293 NUDIX domain RSC3_00839 PF12867 DinB superfamily RSC3_00840 PF09924 Uncharacterised conserved protein (DUF2156) RSC3_00840 PF03706 Lysylphosphatidylglycerol synthase TM region RSC3_00841 PF02567 Phenazine biosynthesis-like protein RSC3_00842 PF00881 Nitroreductase family RSC3_00843 PF14151 YfhD-like protein RSC3_00845 PF08338 Domain of unknown function (DUF1731) RSC3_00845 PF01370 NAD dependent epimerase/dehydratase family RSC3_00846 PF02631 RecX family RSC3_00847 PF08838 Protein of unknown function (DUF1811) RSC3_00849 PF08176 Small acid-soluble spore protein K family RSC3_00850 PF14043 WVELL protein RSC3_00852 PF00535 Glycosyl transferase family 2 RSC3_00854 PF09586 Bacterial membrane protein YfhO RSC3_00855 PF04307 LexA-binding, inner membrane-associated putative hydrolase RSC3_00856 PF00730 HhH-GPD superfamily base excision DNA repair protein RSC3_00856 PF14815 NUDIX domain RSC3_00860 PF14182 YgaB-like protein RSC3_00861 PF04167 Protein of unknown function (DUF402) RSC3_00862 PF00664 ABC transporter transmembrane region RSC3_00862 PF00005 ABC transporter RSC3_00863 PF00005 ABC transporter RSC3_00863 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_00864 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_00864 PF00005 ABC transporter RSC3_00865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_00866 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00867 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_00867 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00868 PF06081 Aromatic acid exporter family member 1 RSC3_00869 PF00202 Aminotransferase class-III RSC3_00870 PF00578 AhpC/TSA family RSC3_00871 PF01475 Ferric uptake regulator family RSC3_00872 PF11023 Zinc-ribbon containing domain RSC3_00873 PF14540 Nucleotidyltransferase-like RSC3_00873 PF18576 Helix-turn-helix domain RSC3_00883 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_00888 PF14449 Pre-toxin TG RSC3_00888 PF04740 LXG domain of WXG superfamily RSC3_00889 PF08863 YolD-like protein RSC3_00891 PF02824 TGS domain RSC3_00891 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_00891 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RSC3_00891 PF03129 Anticodon binding domain RSC3_00898 PF01487 Type I 3-dehydroquinase RSC3_00899 PF13667 ThiC-associated domain RSC3_00899 PF01964 Radical SAM ThiC family RSC3_00900 PF13667 ThiC-associated domain RSC3_00900 PF01964 Radical SAM ThiC family RSC3_00901 PF00005 ABC transporter RSC3_00902 PF09084 NMT1/THI5 like RSC3_00903 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00904 PF00296 Luciferase-like monooxygenase RSC3_00906 PF01381 Helix-turn-helix RSC3_00908 PF13732 Domain of unknown function (DUF4162) RSC3_00908 PF00005 ABC transporter RSC3_00912 PF00253 Ribosomal protein S14p/S29e RSC3_00915 PF08331 Domain of unknown function (DUF1730) RSC3_00916 PF12671 Putative amidase domain RSC3_00917 PF00588 SpoU rRNA Methylase family RSC3_00918 PF13171 Protein of unknown function (DUF4004) RSC3_00919 PF04519 Polymer-forming cytoskeletal RSC3_00923 PF06798 PrkA serine protein kinase C-terminal domain RSC3_00923 PF08298 PrkA AAA domain RSC3_00924 PF04285 Protein of unknown function (DUF444) RSC3_00926 PF07690 Major Facilitator Superfamily RSC3_00927 PF03358 NADPH-dependent FMN reductase RSC3_00930 PF00392 Bacterial regulatory proteins, gntR family RSC3_00931 PF00005 ABC transporter RSC3_00932 PF00005 ABC transporter RSC3_00933 PF12679 ABC-2 family transporter protein RSC3_00934 PF00313 'Cold-shock' DNA-binding domain RSC3_00936 PF00005 ABC transporter RSC3_00936 PF09383 NIL domain RSC3_00937 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_00938 PF03180 NLPA lipoprotein RSC3_00939 PF00375 Sodium:dicarboxylate symporter family RSC3_00940 PF00375 Sodium:dicarboxylate symporter family RSC3_00942 PF00326 Prolyl oligopeptidase family RSC3_00943 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RSC3_00945 PF07875 Coat F domain RSC3_00946 PF13426 PAS domain RSC3_00946 PF13188 PAS domain RSC3_00946 PF00989 PAS fold RSC3_00946 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00946 PF00512 His Kinase A (phospho-acceptor) domain RSC3_00947 PF00512 His Kinase A (phospho-acceptor) domain RSC3_00947 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_00948 PF00149 Calcineurin-like phosphoesterase RSC3_00948 PF02872 5'-nucleotidase, C-terminal domain RSC3_00948 PF00565 Staphylococcal nuclease homologue RSC3_00948 PF00746 LPXTG cell wall anchor motif RSC3_00949 PF00565 Staphylococcal nuclease homologue RSC3_00949 PF00746 LPXTG cell wall anchor motif RSC3_00949 PF02872 5'-nucleotidase, C-terminal domain RSC3_00949 PF00149 Calcineurin-like phosphoesterase RSC3_00950 PF02872 5'-nucleotidase, C-terminal domain RSC3_00950 PF00746 LPXTG cell wall anchor motif RSC3_00950 PF00149 Calcineurin-like phosphoesterase RSC3_00950 PF00565 Staphylococcal nuclease homologue RSC3_00951 PF04203 Sortase domain RSC3_00952 PF00849 RNA pseudouridylate synthase RSC3_00952 PF01479 S4 domain RSC3_00953 PF17326 Family of unknown function (DUF5365) RSC3_00954 PF00571 CBS domain RSC3_00955 PF13419 Haloacid dehalogenase-like hydrolase RSC3_00956 PF00583 Acetyltransferase (GNAT) family RSC3_00956 PF00795 Carbon-nitrogen hydrolase RSC3_00958 PF12848 ABC transporter RSC3_00958 PF16326 ABC transporter C-terminal domain RSC3_00958 PF00005 ABC transporter RSC3_00959 PF01226 Formate/nitrite transporter RSC3_00962 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_00962 PF00107 Zinc-binding dehydrogenase RSC3_00963 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_00963 PF00107 Zinc-binding dehydrogenase RSC3_00964 PF04309 Glycerol-3-phosphate responsive antiterminator RSC3_00965 PF00230 Major intrinsic protein RSC3_00966 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RSC3_00966 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RSC3_00967 PF01266 FAD dependent oxidoreductase RSC3_00967 PF16901 C-terminal domain of alpha-glycerophosphate oxidase RSC3_00968 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I RSC3_00968 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II RSC3_00968 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III RSC3_00968 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain RSC3_00971 PF07730 Histidine kinase RSC3_00971 PF13185 GAF domain RSC3_00972 PF00196 Bacterial regulatory proteins, luxR family RSC3_00972 PF00072 Response regulator receiver domain RSC3_00973 PF00072 Response regulator receiver domain RSC3_00973 PF00196 Bacterial regulatory proteins, luxR family RSC3_00974 PF03358 NADPH-dependent FMN reductase RSC3_00975 PF14148 YhdB-like protein RSC3_00976 PF13028 Protein of unknown function (DUF3889) RSC3_00977 PF02082 Transcriptional regulator RSC3_00979 PF00970 Oxidoreductase FAD-binding domain RSC3_00979 PF00175 Oxidoreductase NAD-binding domain RSC3_00979 PF00042 Globin RSC3_00980 PF04293 SpoVR like protein RSC3_00981 PF00877 NlpC/P60 family RSC3_00981 PF01476 LysM domain RSC3_00982 PF03466 LysR substrate binding domain RSC3_00982 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_00983 PF00285 Citrate synthase, C-terminal domain RSC3_00984 PF07995 Glucose / Sorbosone dehydrogenase RSC3_00986 PF00209 Sodium:neurotransmitter symporter family RSC3_00988 PF01510 N-acetylmuramoyl-L-alanine amidase RSC3_00988 PF01471 Putative peptidoglycan binding domain RSC3_00990 PF14449 Pre-toxin TG RSC3_00990 PF04740 LXG domain of WXG superfamily RSC3_00991 PF12833 Helix-turn-helix domain RSC3_00991 PF06445 GyrI-like small molecule binding domain RSC3_00992 PF00155 Aminotransferase class I and II RSC3_00992 PF00392 Bacterial regulatory proteins, gntR family RSC3_00994 PF17453 Sigma-M inhibitor RSC3_00995 PF13800 Sigma factor regulator N-terminal RSC3_00995 PF13791 Sigma factor regulator C-terminal RSC3_00996 PF04542 Sigma-70 region 2 RSC3_00996 PF08281 Sigma-70, region 4 RSC3_00997 PF07883 Cupin domain RSC3_00999 PF00248 Aldo/keto reductase family RSC3_01000 PF01553 Acyltransferase RSC3_01001 PF05656 Protein of unknown function (DUF805) RSC3_01003 PF00440 Bacterial regulatory proteins, tetR family RSC3_01003 PF18665 Tetracyclin repressor-like, C-terminal domain RSC3_01004 PF03471 Transporter associated domain RSC3_01004 PF00571 CBS domain RSC3_01004 PF01595 Cyclin M transmembrane N-terminal domain RSC3_01005 PF13411 MerR HTH family regulatory protein RSC3_01007 PF00571 CBS domain RSC3_01007 PF03471 Transporter associated domain RSC3_01007 PF01595 Cyclin M transmembrane N-terminal domain RSC3_01010 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_01010 PF05036 Sporulation related domain RSC3_01011 PF05036 Sporulation related domain RSC3_01011 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_01012 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RSC3_01013 PF02537 CrcB-like protein, Camphor Resistance (CrcB) RSC3_01014 PF03009 Glycerophosphoryl diester phosphodiesterase family RSC3_01015 PF03009 Glycerophosphoryl diester phosphodiesterase family RSC3_01016 PF17444 Uncharacterized YhdX-like RSC3_01017 PF00924 Mechanosensitive ion channel RSC3_01018 PF02146 Sir2 family RSC3_01020 PF01522 Polysaccharide deacetylase RSC3_01021 PF01063 Amino-transferase class IV RSC3_01022 PF01063 Amino-transferase class IV RSC3_01023 PF03553 Na+/H+ antiporter family RSC3_01024 PF01263 Aldose 1-epimerase RSC3_01026 PF16302 Domain of unknown function (DUF4944) RSC3_01030 PF00582 Universal stress protein family RSC3_01032 PF00005 ABC transporter RSC3_01032 PF00664 ABC transporter transmembrane region RSC3_01033 PF00005 ABC transporter RSC3_01033 PF00664 ABC transporter transmembrane region RSC3_01034 PF13460 NAD(P)H-binding RSC3_01036 PF00269 Small, acid-soluble spore proteins, alpha/beta type RSC3_01038 PF03459 TOBE domain RSC3_01038 PF17912 MalK OB fold domain RSC3_01038 PF00005 ABC transporter RSC3_01039 PF13556 PucR C-terminal helix-turn-helix domain RSC3_01040 PF17277 Family of unknown function (DUF5342) RSC3_01041 PF14398 YheC/D like ATP-grasp RSC3_01042 PF14398 YheC/D like ATP-grasp RSC3_01043 PF04286 Protein of unknown function (DUF445) RSC3_01044 PF06133 Control of competence regulator ComK, YlbF/YmcA RSC3_01046 PF04055 Radical SAM superfamily RSC3_01047 PF00999 Sodium/hydrogen exchanger family RSC3_01048 PF02080 TrkA-C domain RSC3_01049 PF00378 Enoyl-CoA hydratase/isomerase RSC3_01051 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_01055 PF00005 ABC transporter RSC3_01055 PF13732 Domain of unknown function (DUF4162) RSC3_01057 PF00149 Calcineurin-like phosphoesterase RSC3_01058 PF13514 AAA domain RSC3_01059 PF13514 AAA domain RSC3_01060 PF01966 HD domain RSC3_01061 PF14147 Sporulation protein YhaL RSC3_01063 PF09680 Family of unknown function RSC3_01066 PF11667 Putative zincin peptidase RSC3_01067 PF08963 Protein of unknown function (DUF1878) RSC3_01068 PF01047 MarR family RSC3_01069 PF12732 YtxH-like protein RSC3_01071 PF17099 Tryptophan transporter TrpP RSC3_01072 PF00266 Aminotransferase class-V RSC3_01073 PF01230 HIT domain RSC3_01074 PF00005 ABC transporter RSC3_01075 PF05975 Bacterial ABC transporter protein EcsB RSC3_01076 PF12787 EcsC protein family RSC3_01077 PF07687 Peptidase dimerisation domain RSC3_01077 PF01546 Peptidase family M20/M25/M40 RSC3_01079 PF03992 Antibiotic biosynthesis monooxygenase RSC3_01080 PF00912 Transglycosylase RSC3_01080 PF00905 Penicillin binding protein transpeptidase domain RSC3_01081 PF01208 Uroporphyrinogen decarboxylase (URO-D) RSC3_01082 PF00762 Ferrochelatase RSC3_01083 PF01593 Flavin containing amine oxidoreductase RSC3_01084 PF00440 Bacterial regulatory proteins, tetR family RSC3_01084 PF17932 Tetracyclin repressor-like, C-terminal domain RSC3_01086 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RSC3_01086 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RSC3_01087 PF05343 M42 glutamyl aminopeptidase RSC3_01089 PF00375 Sodium:dicarboxylate symporter family RSC3_01090 PF12706 Beta-lactamase superfamily domain RSC3_01091 PF03099 Biotin/lipoate A/B protein ligase family RSC3_01091 PF10437 Bacterial lipoate protein ligase C-terminus RSC3_01092 PF13193 AMP-binding enzyme C-terminal domain RSC3_01092 PF00501 AMP-binding enzyme RSC3_01093 PF07883 Cupin domain RSC3_01093 PF01381 Helix-turn-helix RSC3_01096 PF01435 Peptidase family M48 RSC3_01096 PF16491 CAAX prenyl protease N-terminal, five membrane helices RSC3_01097 PF05922 Peptidase inhibitor I9 RSC3_01097 PF00082 Subtilase family RSC3_01099 PF00892 EamA-like transporter family RSC3_01100 PF01497 Periplasmic binding protein RSC3_01101 PF01032 FecCD transport family RSC3_01102 PF01032 FecCD transport family RSC3_01103 PF00300 Histidine phosphatase superfamily (branch 1) RSC3_01104 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_01105 PF01266 FAD dependent oxidoreductase RSC3_01105 PF00355 Rieske [2Fe-2S] domain RSC3_01107 PF08858 IDEAL domain RSC3_01108 PF06338 ComK protein RSC3_01110 PF09335 SNARE associated Golgi protein RSC3_01111 PF10502 Signal peptidase, peptidase S26 RSC3_01113 PF00082 Subtilase family RSC3_01114 PF00082 Subtilase family RSC3_01116 PF07905 Purine catabolism regulatory protein-like family RSC3_01116 PF13556 PucR C-terminal helix-turn-helix domain RSC3_01116 PF17853 GGDEF-like domain RSC3_01118 PF01979 Amidohydrolase family RSC3_01119 PF01546 Peptidase family M20/M25/M40 RSC3_01120 PF05899 Protein of unknown function (DUF861) RSC3_01120 PF07883 Cupin domain RSC3_01121 PF02615 Malate/L-lactate dehydrogenase RSC3_01122 PF02615 Malate/L-lactate dehydrogenase RSC3_01123 PF02629 CoA binding domain RSC3_01123 PF00549 CoA-ligase RSC3_01124 PF06545 Protein of unknown function (DUF1116) RSC3_01125 PF11392 Protein of unknown function (DUF2877) RSC3_01126 PF00696 Amino acid kinase family RSC3_01127 PF07690 Major Facilitator Superfamily RSC3_01128 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_01130 PF00356 Bacterial regulatory proteins, lacI family RSC3_01131 PF01547 Bacterial extracellular solute-binding protein RSC3_01132 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01133 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01134 PF02056 Family 4 glycosyl hydrolase RSC3_01134 PF11975 Family 4 glycosyl hydrolase C-terminal domain RSC3_01135 PF05145 Transition state regulatory protein AbrB RSC3_01136 PF11007 Spore coat associated protein JA (CotJA) RSC3_01137 PF12652 CotJB protein RSC3_01138 PF05067 Manganese containing catalase RSC3_01139 PF13193 AMP-binding enzyme C-terminal domain RSC3_01139 PF00501 AMP-binding enzyme RSC3_01140 PF07690 Major Facilitator Superfamily RSC3_01141 PF07690 Major Facilitator Superfamily RSC3_01142 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_01142 PF12793 Sugar transport-related sRNA regulator N-term RSC3_01144 PF16736 Single Cache-like RSC3_01144 PF00989 PAS fold RSC3_01144 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01144 PF00512 His Kinase A (phospho-acceptor) domain RSC3_01145 PF00072 Response regulator receiver domain RSC3_01145 PF00486 Transcriptional regulatory protein, C terminal RSC3_01146 PF02915 Rubrerythrin RSC3_01148 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01149 PF12705 PD-(D/E)XK nuclease superfamily RSC3_01150 PF12705 PD-(D/E)XK nuclease superfamily RSC3_01151 PF12705 PD-(D/E)XK nuclease superfamily RSC3_01151 PF00580 UvrD/REP helicase N-terminal domain RSC3_01151 PF13361 UvrD-like helicase C-terminal domain RSC3_01152 PF12705 PD-(D/E)XK nuclease superfamily RSC3_01152 PF13361 UvrD-like helicase C-terminal domain RSC3_01152 PF00580 UvrD/REP helicase N-terminal domain RSC3_01153 PF00149 Calcineurin-like phosphoesterase RSC3_01153 PF12320 Type 5 capsule protein repressor C-terminal domain RSC3_01154 PF00149 Calcineurin-like phosphoesterase RSC3_01154 PF12320 Type 5 capsule protein repressor C-terminal domain RSC3_01155 PF13476 AAA domain RSC3_01156 PF13476 AAA domain RSC3_01157 PF10676 Spore germination protein gerPA/gerPF RSC3_01158 PF10970 Spore germination protein GerPE RSC3_01160 PF10737 Spore germination protein GerPC RSC3_01161 PF10803 Spore germination GerPB RSC3_01162 PF10676 Spore germination protein gerPA/gerPF RSC3_01163 PF12650 Domain of unknown function (DUF3784) RSC3_01164 PF09388 Spo0E like sporulation regulatory protein RSC3_01165 PF08757 CotH kinase protein RSC3_01167 PF01557 Fumarylacetoacetate (FAA) hydrolase family RSC3_01169 PF03193 RsgA GTPase RSC3_01170 PF07457 Protein of unknown function (DUF1516) RSC3_01171 PF10949 Protein of unknown function (DUF2777) RSC3_01172 PF00733 Asparagine synthase RSC3_01172 PF13537 Glutamine amidotransferase domain RSC3_01173 PF00909 Ammonium Transporter Family RSC3_01174 PF00909 Ammonium Transporter Family RSC3_01175 PF00543 Nitrogen regulatory protein P-II RSC3_01176 PF01554 MatE RSC3_01177 PF02311 AraC-like ligand binding domain RSC3_01177 PF12833 Helix-turn-helix domain RSC3_01179 PF00356 Bacterial regulatory proteins, lacI family RSC3_01180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_01180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_01181 PF05504 Spore germination B3/ GerAC like, C-terminal RSC3_01184 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_01185 PF01810 LysE type translocator RSC3_01186 PF00155 Aminotransferase class I and II RSC3_01186 PF00392 Bacterial regulatory proteins, gntR family RSC3_01187 PF00202 Aminotransferase class-III RSC3_01188 PF00282 Pyridoxal-dependent decarboxylase conserved domain RSC3_01189 PF04183 IucA / IucC family RSC3_01189 PF06276 Ferric iron reductase FhuF-like transporter RSC3_01190 PF06276 Ferric iron reductase FhuF-like transporter RSC3_01190 PF04183 IucA / IucC family RSC3_01192 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) RSC3_01193 PF06276 Ferric iron reductase FhuF-like transporter RSC3_01193 PF04183 IucA / IucC family RSC3_01194 PF13673 Acetyltransferase (GNAT) domain RSC3_01196 PF08279 HTH domain RSC3_01196 PF13280 WYL domain RSC3_01197 PF02607 B12 binding domain RSC3_01197 PF02310 B12 binding domain RSC3_01197 PF00809 Pterin binding enzyme RSC3_01197 PF02965 Vitamin B12 dependent methionine synthase, activation domain RSC3_01197 PF02574 Homocysteine S-methyltransferase RSC3_01198 PF02310 B12 binding domain RSC3_01198 PF02965 Vitamin B12 dependent methionine synthase, activation domain RSC3_01198 PF00809 Pterin binding enzyme RSC3_01198 PF02574 Homocysteine S-methyltransferase RSC3_01198 PF02607 B12 binding domain RSC3_01199 PF02219 Methylenetetrahydrofolate reductase RSC3_01199 PF02574 Homocysteine S-methyltransferase RSC3_01200 PF04461 Protein of unknown function (DUF520) RSC3_01201 PF17783 CvfB-like winged helix domain RSC3_01201 PF13509 S1 domain RSC3_01204 PF02645 Uncharacterised protein, DegV family COG1307 RSC3_01205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_01205 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_01206 PF12690 Intracellular proteinase inhibitor RSC3_01207 PF00478 IMP dehydrogenase / GMP reductase domain RSC3_01208 PF12758 Protein of unknown function (DUF3813) RSC3_01211 PF00326 Prolyl oligopeptidase family RSC3_01212 PF01883 Iron-sulfur cluster assembly protein RSC3_01213 PF02774 Semialdehyde dehydrogenase, dimerisation domain RSC3_01213 PF01118 Semialdehyde dehydrogenase, NAD binding domain RSC3_01214 PF01960 ArgJ family RSC3_01215 PF00696 Amino acid kinase family RSC3_01216 PF00202 Aminotransferase class-III RSC3_01217 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RSC3_01217 PF00117 Glutamine amidotransferase class-I RSC3_01218 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RSC3_01218 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RSC3_01219 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RSC3_01219 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RSC3_01220 PF02673 Bacitracin resistance protein BacA RSC3_01221 PF14168 YjzC-like protein RSC3_01225 PF02608 ABC transporter substrate-binding protein PnrA-like RSC3_01226 PF10815 ComZ RSC3_01228 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III RSC3_01228 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal RSC3_01229 PF00109 Beta-ketoacyl synthase, N-terminal domain RSC3_01229 PF02801 Beta-ketoacyl synthase, C-terminal domain RSC3_01231 PF10026 Predicted Zn-dependent protease (DUF2268) RSC3_01232 PF00005 ABC transporter RSC3_01232 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01233 PF00005 ABC transporter RSC3_01233 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01234 PF00005 ABC transporter RSC3_01234 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_01236 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01237 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_01237 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01239 PF12227 Protein of unknown function (DUF3603) RSC3_01240 PF00579 tRNA synthetases class I (W and Y) RSC3_01242 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_01243 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01244 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_01244 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01245 PF00005 ABC transporter RSC3_01245 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01246 PF00005 ABC transporter RSC3_01246 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01247 PF13508 Acetyltransferase (GNAT) domain RSC3_01248 PF03960 ArsC family RSC3_01249 PF03741 Integral membrane protein TerC family RSC3_01250 PF05389 Negative regulator of genetic competence (MecA) RSC3_01251 PF01270 Glycosyl hydrolases family 8 RSC3_01254 PF01970 Tripartite tricarboxylate transporter TctA family RSC3_01255 PF00072 Response regulator receiver domain RSC3_01255 PF12431 Transcriptional regulator RSC3_01256 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01256 PF17203 Single cache domain 3 RSC3_01256 PF00989 PAS fold RSC3_01256 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RSC3_01257 PF06054 Competence protein CoiA-like family RSC3_01258 PF01432 Peptidase family M3 RSC3_01258 PF08439 Oligopeptidase F RSC3_01260 PF01152 Bacterial-like globin RSC3_01261 PF01464 Transglycosylase SLT domain RSC3_01262 PF01928 CYTH domain RSC3_01264 PF04607 Region found in RelA / SpoT proteins RSC3_01265 PF01513 ATP-NAD kinase RSC3_01266 PF00849 RNA pseudouridylate synthase RSC3_01267 PF00149 Calcineurin-like phosphoesterase RSC3_01268 PF02254 TrkA-N domain RSC3_01268 PF02080 TrkA-C domain RSC3_01268 PF00999 Sodium/hydrogen exchanger family RSC3_01269 PF03070 TENA/THI-4/PQQC family RSC3_01270 PF02581 Thiamine monophosphate synthase RSC3_01271 PF01266 FAD dependent oxidoreductase RSC3_01272 PF02597 ThiS family RSC3_01273 PF05690 Thiazole biosynthesis protein ThiG RSC3_01274 PF00899 ThiF family RSC3_01275 PF08543 Phosphomethylpyrimidine kinase RSC3_01277 PF14153 Spore coat protein CotO RSC3_01278 PF10612 Spore coat protein Z RSC3_01279 PF10612 Spore coat protein Z RSC3_01280 PF07552 Spore Coat Protein X and V domain RSC3_01282 PF07552 Spore Coat Protein X and V domain RSC3_01283 PF07098 Protein of unknown function (DUF1360) RSC3_01287 PF14069 Stage VI sporulation protein F RSC3_01288 PF00580 UvrD/REP helicase N-terminal domain RSC3_01288 PF13361 UvrD-like helicase C-terminal domain RSC3_01289 PF00580 UvrD/REP helicase N-terminal domain RSC3_01289 PF13361 UvrD-like helicase C-terminal domain RSC3_01291 PF09335 SNARE associated Golgi protein RSC3_01292 PF16363 GDP-mannose 4,6 dehydratase RSC3_01293 PF00483 Nucleotidyl transferase RSC3_01294 PF04138 GtrA-like protein RSC3_01295 PF13673 Acetyltransferase (GNAT) domain RSC3_01297 PF00756 Putative esterase RSC3_01302 PF01053 Cys/Met metabolism PLP-dependent enzyme RSC3_01303 PF01053 Cys/Met metabolism PLP-dependent enzyme RSC3_01304 PF05684 Protein of unknown function (DUF819) RSC3_01307 PF00144 Beta-lactamase RSC3_01307 PF11954 Domain of unknown function (DUF3471) RSC3_01308 PF00144 Beta-lactamase RSC3_01308 PF11954 Domain of unknown function (DUF3471) RSC3_01310 PF04616 Glycosyl hydrolases family 43 RSC3_01313 PF14602 Hexapeptide repeat of succinyl-transferase RSC3_01313 PF12464 Maltose acetyltransferase RSC3_01315 PF03466 LysR substrate binding domain RSC3_01315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_01316 PF00175 Oxidoreductase NAD-binding domain RSC3_01316 PF00258 Flavodoxin RSC3_01316 PF00667 FAD binding domain RSC3_01317 PF01077 Nitrite and sulphite reductase 4Fe-4S domain RSC3_01317 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain RSC3_01318 PF03466 LysR substrate binding domain RSC3_01318 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_01319 PF00892 EamA-like transporter family RSC3_01320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_01321 PF16800 IseA DL-endopeptidase inhibitor RSC3_01322 PF06725 3D domain RSC3_01322 PF01476 LysM domain RSC3_01323 PF07690 Major Facilitator Superfamily RSC3_01324 PF00440 Bacterial regulatory proteins, tetR family RSC3_01327 PF04634 Protein of unknown function, DUF600 RSC3_01328 PF04740 LXG domain of WXG superfamily RSC3_01329 PF05908 Poly-gamma-glutamate hydrolase RSC3_01330 PF05908 Poly-gamma-glutamate hydrolase RSC3_01331 PF06114 IrrE N-terminal-like domain RSC3_01332 PF01381 Helix-turn-helix RSC3_01336 PF01695 IstB-like ATP binding protein RSC3_01340 PF17356 Phage-like element PBSX protein XtrA RSC3_01341 PF08281 Sigma-70, region 4 RSC3_01342 PF10668 Phage terminase small subunit RSC3_01342 PF03592 Terminase small subunit RSC3_01343 PF04466 Phage terminase large subunit RSC3_01343 PF17288 Terminase RNAseH like domain RSC3_01344 PF04860 Phage portal protein RSC3_01345 PF14550 Putative phage serine protease XkdF RSC3_01346 PF05065 Phage capsid family RSC3_01347 PF11436 Protein of unknown function (DUF3199) RSC3_01348 PF12206 Domain of unknown function (DUF3599) RSC3_01349 PF04883 Bacteriophage HK97-gp10, putative tail-component RSC3_01352 PF04984 Phage tail sheath protein subtilisin-like domain RSC3_01352 PF17482 Phage tail sheath C-terminal domain RSC3_01352 PF17481 Phage tail sheath protein beta-sandwich domain RSC3_01353 PF09393 Phage tail tube protein RSC3_01354 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC RSC3_01356 PF01464 Transglycosylase SLT domain RSC3_01357 PF01464 Transglycosylase SLT domain RSC3_01358 PF01476 LysM domain RSC3_01360 PF10844 Protein of unknown function (DUF2577) RSC3_01361 PF10934 Protein of unknown function (DUF2634) RSC3_01362 PF04865 Baseplate J-like protein RSC3_01363 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) RSC3_01367 PF10779 Haemolysin XhlA RSC3_01368 PF04688 SPP1 phage holin RSC3_01369 PF01510 N-acetylmuramoyl-L-alanine amidase RSC3_01369 PF01471 Putative peptidoglycan binding domain RSC3_01370 PF07729 FCD domain RSC3_01370 PF00392 Bacterial regulatory proteins, gntR family RSC3_01371 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_01371 PF00107 Zinc-binding dehydrogenase RSC3_01372 PF03786 D-mannonate dehydratase (UxuA) RSC3_01373 PF00106 short chain dehydrogenase RSC3_01374 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_01374 PF00107 Zinc-binding dehydrogenase RSC3_01375 PF07690 Major Facilitator Superfamily RSC3_01376 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system RSC3_01377 PF14171 Toxin SpoIISA, type II toxin-antitoxin system RSC3_01378 PF01384 Phosphate transporter family RSC3_01379 PF01865 Protein of unknown function DUF47 RSC3_01381 PF04854 Protein of unknown function, DUF624 RSC3_01382 PF06580 Histidine kinase RSC3_01382 PF02743 Cache domain RSC3_01382 PF00672 HAMP domain RSC3_01382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01383 PF12833 Helix-turn-helix domain RSC3_01383 PF00072 Response regulator receiver domain RSC3_01384 PF13416 Bacterial extracellular solute-binding protein RSC3_01385 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01386 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01387 PF07470 Glycosyl Hydrolase Family 88 RSC3_01388 PF12833 Helix-turn-helix domain RSC3_01389 PF13472 GDSL-like Lipase/Acylhydrolase family RSC3_01390 PF09224 Domain of unknown function (DUF1961) RSC3_01391 PF04854 Protein of unknown function, DUF624 RSC3_01392 PF18370 Rhamnogalacturonan I lyases beta-sheet domain RSC3_01393 PF13472 GDSL-like Lipase/Acylhydrolase family RSC3_01394 PF01839 FG-GAP repeat RSC3_01394 PF18370 Rhamnogalacturonan I lyases beta-sheet domain RSC3_01395 PF00248 Aldo/keto reductase family RSC3_01397 PF00657 GDSL-like Lipase/Acylhydrolase RSC3_01398 PF02449 Beta-galactosidase RSC3_01398 PF08532 Beta-galactosidase trimerisation domain RSC3_01398 PF08533 Beta-galactosidase C-terminal domain RSC3_01401 PF01547 Bacterial extracellular solute-binding protein RSC3_01402 PF01547 Bacterial extracellular solute-binding protein RSC3_01403 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01404 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01405 PF13520 Amino acid permease RSC3_01406 PF13520 Amino acid permease RSC3_01407 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_01408 PF13180 PDZ domain RSC3_01409 PF14748 Pyrroline-5-carboxylate reductase dimerisation RSC3_01409 PF03807 NADP oxidoreductase coenzyme F420-dependent RSC3_01410 PF04951 D-aminopeptidase RSC3_01411 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01412 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_01412 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_01413 PF00005 ABC transporter RSC3_01413 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01414 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_01415 PF02016 LD-carboxypeptidase N-terminal domain RSC3_01415 PF17676 LD-carboxypeptidase C-terminal domain RSC3_01416 PF13378 Enolase C-terminal domain-like RSC3_01416 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_01417 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_01417 PF13378 Enolase C-terminal domain-like RSC3_01418 PF00877 NlpC/P60 family RSC3_01419 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_01419 PF00005 ABC transporter RSC3_01423 PF03061 Thioesterase superfamily RSC3_01424 PF04239 Protein of unknown function (DUF421) RSC3_01425 PF00544 Pectate lyase RSC3_01430 PF12867 DinB superfamily RSC3_01431 PF00893 Small Multidrug Resistance protein RSC3_01432 PF00893 Small Multidrug Resistance protein RSC3_01433 PF00551 Formyl transferase RSC3_01433 PF01842 ACT domain RSC3_01434 PF00696 Amino acid kinase family RSC3_01434 PF01472 PUA domain RSC3_01435 PF00171 Aldehyde dehydrogenase family RSC3_01436 PF02566 OsmC-like protein RSC3_01437 PF01047 MarR family RSC3_01438 PF02566 OsmC-like protein RSC3_01440 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RSC3_01441 PF00300 Histidine phosphatase superfamily (branch 1) RSC3_01444 PF08267 Cobalamin-independent synthase, N-terminal domain RSC3_01444 PF01717 Cobalamin-independent synthase, Catalytic domain RSC3_01445 PF00082 Subtilase family RSC3_01446 PF11132 Transcriptional regulator protein (SplA) RSC3_01447 PF00571 CBS domain RSC3_01447 PF01769 Divalent cation transporter RSC3_01447 PF03448 MgtE intracellular N domain RSC3_01449 PF13411 MerR HTH family regulatory protein RSC3_01451 PF01047 MarR family RSC3_01452 PF01068 ATP dependent DNA ligase domain RSC3_01453 PF01068 ATP dependent DNA ligase domain RSC3_01454 PF02735 Ku70/Ku80 beta-barrel domain RSC3_01455 PF00990 Diguanylate cyclase, GGDEF domain RSC3_01455 PF00563 EAL domain RSC3_01455 PF03707 Bacterial signalling protein N terminal repeat RSC3_01456 PF09335 SNARE associated Golgi protein RSC3_01457 PF09335 SNARE associated Golgi protein RSC3_01458 PF03741 Integral membrane protein TerC family RSC3_01459 PF04542 Sigma-70 region 2 RSC3_01460 PF12791 Anti-sigma factor N-terminus RSC3_01461 PF00269 Small, acid-soluble spore proteins, alpha/beta type RSC3_01462 PF08876 Domain of unknown function (DUF1836) RSC3_01463 PF01435 Peptidase family M48 RSC3_01464 PF02386 Cation transport protein RSC3_01465 PF05223 NTF2-like N-terminal transpeptidase domain RSC3_01465 PF03717 Penicillin-binding Protein dimerisation domain RSC3_01465 PF00905 Penicillin binding protein transpeptidase domain RSC3_01468 PF01757 Acyltransferase family RSC3_01469 PF13426 PAS domain RSC3_01469 PF13188 PAS domain RSC3_01469 PF00989 PAS fold RSC3_01469 PF00512 His Kinase A (phospho-acceptor) domain RSC3_01469 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01470 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RSC3_01470 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RSC3_01472 PF01008 Initiation factor 2 subunit family RSC3_01473 PF01008 Initiation factor 2 subunit family RSC3_01474 PF01636 Phosphotransferase enzyme family RSC3_01475 PF00795 Carbon-nitrogen hydrolase RSC3_01476 PF00155 Aminotransferase class I and II RSC3_01477 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain RSC3_01477 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain RSC3_01478 PF00596 Class II Aldolase and Adducin N-terminal domain RSC3_01479 PF00596 Class II Aldolase and Adducin N-terminal domain RSC3_01480 PF03079 ARD/ARD' family RSC3_01481 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_01482 PF06803 Protein of unknown function (DUF1232) RSC3_01484 PF00512 His Kinase A (phospho-acceptor) domain RSC3_01484 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01484 PF02743 Cache domain RSC3_01485 PF01047 MarR family RSC3_01486 PF00691 OmpA family RSC3_01486 PF13677 Membrane MotB of proton-channel complex MotA/MotB RSC3_01487 PF01618 MotA/TolQ/ExbB proton channel family RSC3_01488 PF07724 AAA domain (Cdc48 subfamily) RSC3_01488 PF10431 C-terminal, D2-small domain, of ClpB protein RSC3_01488 PF17871 AAA lid domain RSC3_01488 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_01490 PF06508 Queuosine biosynthesis protein QueC RSC3_01491 PF01242 6-pyruvoyl tetrahydropterin synthase RSC3_01492 PF04055 Radical SAM superfamily RSC3_01493 PF14489 QueF-like protein RSC3_01495 PF13176 Tetratricopeptide repeat RSC3_01495 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_01498 PF05675 Protein of unknown function (DUF817) RSC3_01500 PF13443 Cro/C1-type HTH DNA-binding domain RSC3_01501 PF11188 Protein of unknown function (DUF2975) RSC3_01509 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) RSC3_01511 PF07486 Cell Wall Hydrolase RSC3_01512 PF01943 Polysaccharide biosynthesis protein RSC3_01513 PF00578 AhpC/TSA family RSC3_01516 PF01321 Creatinase/Prolidase N-terminal domain RSC3_01516 PF00557 Metallopeptidase family M24 RSC3_01519 PF00356 Bacterial regulatory proteins, lacI family RSC3_01519 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family RSC3_01520 PF00874 PRD domain RSC3_01520 PF03123 CAT RNA binding domain RSC3_01521 PF02378 Phosphotransferase system, EIIC RSC3_01521 PF00367 phosphotransferase system, EIIB RSC3_01521 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RSC3_01522 PF00381 PTS HPr component phosphorylation site RSC3_01523 PF05524 PEP-utilising enzyme, N-terminal RSC3_01523 PF00391 PEP-utilising enzyme, mobile domain RSC3_01523 PF02896 PEP-utilising enzyme, TIM barrel domain RSC3_01524 PF11132 Transcriptional regulator protein (SplA) RSC3_01526 PF00583 Acetyltransferase (GNAT) family RSC3_01527 PF02743 Cache domain RSC3_01527 PF00672 HAMP domain RSC3_01527 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_01529 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RSC3_01529 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RSC3_01530 PF00188 Cysteine-rich secretory protein family RSC3_01531 PF03717 Penicillin-binding Protein dimerisation domain RSC3_01531 PF00905 Penicillin binding protein transpeptidase domain RSC3_01532 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01532 PF08447 PAS fold RSC3_01532 PF00989 PAS fold RSC3_01532 PF00512 His Kinase A (phospho-acceptor) domain RSC3_01533 PF00155 Aminotransferase class I and II RSC3_01535 PF06271 RDD family RSC3_01537 PF01584 CheW-like domain RSC3_01537 PF00072 Response regulator receiver domain RSC3_01538 PF14177 YkyB-like protein RSC3_01539 PF07690 Major Facilitator Superfamily RSC3_01540 PF07690 Major Facilitator Superfamily RSC3_01541 PF01476 LysM domain RSC3_01541 PF03734 L,D-transpeptidase catalytic domain RSC3_01542 PF00149 Calcineurin-like phosphoesterase RSC3_01542 PF10518 TAT (twin-arginine translocation) pathway signal sequence RSC3_01544 PF10388 EAL-domain associated signalling protein domain RSC3_01544 PF00563 EAL domain RSC3_01547 PF08796 Protein of unknown function (DUF1797) RSC3_01548 PF04308 Ribonuclease H-like RSC3_01549 PF14156 Antirepressor AbbA RSC3_01551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_01551 PF03466 LysR substrate binding domain RSC3_01552 PF00258 Flavodoxin RSC3_01554 PF00258 Flavodoxin RSC3_01555 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal RSC3_01555 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_01555 PF14602 Hexapeptide repeat of succinyl-transferase RSC3_01556 PF07687 Peptidase dimerisation domain RSC3_01556 PF01546 Peptidase family M20/M25/M40 RSC3_01557 PF03698 Uncharacterised protein family (UPF0180) RSC3_01558 PF10417 C-terminal domain of 1-Cys peroxiredoxin RSC3_01558 PF00578 AhpC/TSA family RSC3_01559 PF00578 AhpC/TSA family RSC3_01562 PF12804 MobA-like NTP transferase domain RSC3_01563 PF00899 ThiF family RSC3_01564 PF00994 Probable molybdopterin binding domain RSC3_01564 PF03454 MoeA C-terminal region (domain IV) RSC3_01564 PF03453 MoeA N-terminal region (domain I and II) RSC3_01565 PF03205 Molybdopterin guanine dinucleotide synthesis protein B RSC3_01566 PF02391 MoaE protein RSC3_01567 PF02597 ThiS family RSC3_01569 PF00664 ABC transporter transmembrane region RSC3_01569 PF00005 ABC transporter RSC3_01570 PF00664 ABC transporter transmembrane region RSC3_01570 PF00005 ABC transporter RSC3_01571 PF04893 Yip1 domain RSC3_01572 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion RSC3_01573 PF00005 ABC transporter RSC3_01574 PF02687 FtsX-like permease family RSC3_01574 PF12704 MacB-like periplasmic core domain RSC3_01575 PF04893 Yip1 domain RSC3_01576 PF00455 DeoR C terminal sensor domain RSC3_01576 PF08220 DeoR-like helix-turn-helix domain RSC3_01577 PF00294 pfkB family carbohydrate kinase RSC3_01578 PF00294 pfkB family carbohydrate kinase RSC3_01579 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_01579 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_01580 PF10502 Signal peptidase, peptidase S26 RSC3_01583 PF00005 ABC transporter RSC3_01583 PF12848 ABC transporter RSC3_01584 PF12848 ABC transporter RSC3_01584 PF00005 ABC transporter RSC3_01586 PF02073 Thermophilic metalloprotease (M29) RSC3_01587 PF17447 Uncharacterized YkpC-like RSC3_01589 PF18277 AbrB C-terminal domain RSC3_01589 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RSC3_01590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01590 PF00512 His Kinase A (phospho-acceptor) domain RSC3_01590 PF00989 PAS fold RSC3_01591 PF02254 TrkA-N domain RSC3_01591 PF02080 TrkA-C domain RSC3_01592 PF13382 Adenine deaminase C-terminal domain RSC3_01592 PF01979 Amidohydrolase family RSC3_01593 PF00753 Metallo-beta-lactamase superfamily RSC3_01593 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RSC3_01593 PF17770 Ribonuclease J C-terminal domain RSC3_01594 PF07288 Protein of unknown function (DUF1447) RSC3_01596 PF01327 Polypeptide deformylase RSC3_01598 PF10368 Putative cell-wall binding lipoprotein RSC3_01600 PF00676 Dehydrogenase E1 component RSC3_01601 PF02780 Transketolase, C-terminal domain RSC3_01601 PF02779 Transketolase, pyrimidine binding domain RSC3_01602 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RSC3_01602 PF02817 e3 binding domain RSC3_01602 PF00364 Biotin-requiring enzyme RSC3_01603 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_01603 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RSC3_01605 PF13790 SR1 protein RSC3_01606 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RSC3_01606 PF01276 Orn/Lys/Arg decarboxylase, major domain RSC3_01607 PF05256 Uncharacterised protein family (UPF0223) RSC3_01608 PF06335 Protein of unknown function (DUF1054) RSC3_01610 PF00459 Inositol monophosphatase family RSC3_01611 PF00583 Acetyltransferase (GNAT) family RSC3_01614 PF04542 Sigma-70 region 2 RSC3_01614 PF08281 Sigma-70, region 4 RSC3_01615 PF13490 Putative zinc-finger RSC3_01617 PF03144 Elongation factor Tu domain 2 RSC3_01617 PF00009 Elongation factor Tu GTP binding domain RSC3_01617 PF00679 Elongation factor G C-terminus RSC3_01617 PF14492 Elongation Factor G, domain II RSC3_01618 PF14036 YlaH-like protein RSC3_01619 PF01047 MarR family RSC3_01620 PF01494 FAD binding domain RSC3_01621 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) RSC3_01622 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RSC3_01623 PF02562 PhoH-like protein RSC3_01623 PF13638 PIN domain RSC3_01625 PF04960 Glutaminase RSC3_01626 PF07408 Protein of unknown function (DUF1507) RSC3_01627 PF01098 Cell cycle protein RSC3_01628 PF02785 Biotin carboxylase C-terminal domain RSC3_01628 PF02436 Conserved carboxylase domain RSC3_01628 PF00364 Biotin-requiring enzyme RSC3_01628 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RSC3_01628 PF00682 HMGL-like RSC3_01628 PF00289 Biotin carboxylase, N-terminal domain RSC3_01629 PF02628 Cytochrome oxidase assembly protein RSC3_01630 PF01040 UbiA prenyltransferase family RSC3_01631 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RSC3_01631 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RSC3_01631 PF00034 Cytochrome c RSC3_01632 PF00034 Cytochrome c RSC3_01632 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RSC3_01632 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RSC3_01633 PF00115 Cytochrome C and Quinol oxidase polypeptide I RSC3_01634 PF00510 Cytochrome c oxidase subunit III RSC3_01635 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RSC3_01636 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) RSC3_01637 PF08868 YugN-like family RSC3_01638 PF00571 CBS domain RSC3_01639 PF00188 Cysteine-rich secretory protein family RSC3_01639 PF14504 CAP-associated N-terminal RSC3_01640 PF14071 Putative coat protein RSC3_01642 PF14003 YlbE-like protein RSC3_01644 PF06133 Control of competence regulator ComK, YlbF/YmcA RSC3_01645 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) RSC3_01648 PF01467 Cytidylyltransferase-like RSC3_01649 PF07670 Nucleoside recognition RSC3_01650 PF05362 Lon protease (S16) C-terminal proteolytic domain RSC3_01650 PF13180 PDZ domain RSC3_01651 PF05636 HIGH Nucleotidyl Transferase RSC3_01652 PF02620 Large ribosomal RNA subunit accumulation protein YceD RSC3_01653 PF01783 Ribosomal L32p protein family RSC3_01655 PF00583 Acetyltransferase (GNAT) family RSC3_01656 PF02558 Ketopantoate reductase PanE/ApbA RSC3_01656 PF08546 Ketopantoate reductase PanE/ApbA C terminal RSC3_01657 PF10079 Bacillithiol biosynthesis BshC RSC3_01658 PF02381 MraZ protein, putative antitoxin-like RSC3_01659 PF01795 MraW methylase family RSC3_01661 PF00905 Penicillin binding protein transpeptidase domain RSC3_01661 PF03717 Penicillin-binding Protein dimerisation domain RSC3_01661 PF03793 PASTA domain RSC3_01662 PF03793 PASTA domain RSC3_01662 PF03717 Penicillin-binding Protein dimerisation domain RSC3_01662 PF00905 Penicillin binding protein transpeptidase domain RSC3_01663 PF03793 PASTA domain RSC3_01663 PF03717 Penicillin-binding Protein dimerisation domain RSC3_01663 PF00905 Penicillin binding protein transpeptidase domain RSC3_01665 PF01225 Mur ligase family, catalytic domain RSC3_01665 PF02875 Mur ligase family, glutamate ligase domain RSC3_01665 PF08245 Mur ligase middle domain RSC3_01666 PF00953 Glycosyl transferase family 4 RSC3_01666 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 RSC3_01667 PF08245 Mur ligase middle domain RSC3_01667 PF02875 Mur ligase family, glutamate ligase domain RSC3_01668 PF01098 Cell cycle protein RSC3_01669 PF04101 Glycosyltransferase family 28 C-terminal domain RSC3_01669 PF03033 Glycosyltransferase family 28 N-terminal domain RSC3_01670 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain RSC3_01670 PF01565 FAD binding domain RSC3_01671 PF08478 POTRA domain, FtsQ-type RSC3_01673 PF05949 Bacterial protein of unknown function (DUF881) RSC3_01674 PF05949 Bacterial protein of unknown function (DUF881) RSC3_01675 PF06947 Protein of unknown function (DUF1290) RSC3_01676 PF02491 SHS2 domain inserted in FTSA RSC3_01677 PF02491 SHS2 domain inserted in FTSA RSC3_01678 PF02491 SHS2 domain inserted in FTSA RSC3_01679 PF12327 FtsZ family, C-terminal domain RSC3_01679 PF00091 Tubulin/FtsZ family, GTPase domain RSC3_01680 PF05922 Peptidase inhibitor I9 RSC3_01680 PF00082 Subtilase family RSC3_01681 PF05922 Peptidase inhibitor I9 RSC3_01681 PF00082 Subtilase family RSC3_01682 PF00082 Subtilase family RSC3_01682 PF05922 Peptidase inhibitor I9 RSC3_01683 PF00082 Subtilase family RSC3_01683 PF05922 Peptidase inhibitor I9 RSC3_01684 PF03419 Sporulation factor SpoIIGA RSC3_01685 PF04542 Sigma-70 region 2 RSC3_01685 PF04545 Sigma-70, region 4 RSC3_01686 PF04542 Sigma-70 region 2 RSC3_01686 PF04539 Sigma-70 region 3 RSC3_01686 PF04545 Sigma-70, region 4 RSC3_01687 PF00005 ABC transporter RSC3_01688 PF08241 Methyltransferase domain RSC3_01689 PF05239 PRC-barrel domain RSC3_01690 PF02578 Multi-copper polyphenol oxidoreductase laccase RSC3_01691 PF01168 Alanine racemase, N-terminal domain RSC3_01692 PF04472 Cell division protein SepF RSC3_01693 PF02325 YGGT family RSC3_01694 PF17774 Putative RNA-binding domain in YlmH RSC3_01694 PF01479 S4 domain RSC3_01695 PF05103 DivIVA protein RSC3_01696 PF08264 Anticodon-binding domain of tRNA RSC3_01696 PF00133 tRNA synthetases class I (I, L, M and V) RSC3_01696 PF06827 Zinc finger found in FPG and IleRS RSC3_01697 PF01258 Prokaryotic dksA/traR C4-type zinc finger RSC3_01698 PF01252 Signal peptidase (SPase) II RSC3_01699 PF01479 S4 domain RSC3_01699 PF00849 RNA pseudouridylate synthase RSC3_01700 PF00156 Phosphoribosyl transferase domain RSC3_01701 PF00860 Permease family RSC3_01702 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RSC3_01702 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RSC3_01703 PF01979 Amidohydrolase family RSC3_01704 PF01979 Amidohydrolase family RSC3_01705 PF00117 Glutamine amidotransferase class-I RSC3_01705 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RSC3_01706 PF00117 Glutamine amidotransferase class-I RSC3_01706 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain RSC3_01707 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RSC3_01707 PF02142 MGS-like domain RSC3_01707 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain RSC3_01708 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B RSC3_01708 PF00175 Oxidoreductase NAD-binding domain RSC3_01709 PF01180 Dihydroorotate dehydrogenase RSC3_01710 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RSC3_01711 PF00156 Phosphoribosyl transferase domain RSC3_01713 PF01507 Phosphoadenosine phosphosulfate reductase family RSC3_01714 PF01747 ATP-sulfurylase RSC3_01714 PF14306 PUA-like domain RSC3_01716 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RSC3_01717 PF01903 CbiX RSC3_01719 PF05670 NFACT protein RNA binding domain RSC3_01720 PF00689 Cation transporting ATPase, C-terminus RSC3_01720 PF00690 Cation transporter/ATPase, N-terminus RSC3_01721 PF00689 Cation transporting ATPase, C-terminus RSC3_01721 PF00690 Cation transporter/ATPase, N-terminus RSC3_01722 PF00689 Cation transporting ATPase, C-terminus RSC3_01722 PF00690 Cation transporter/ATPase, N-terminus RSC3_01723 PF00689 Cation transporting ATPase, C-terminus RSC3_01723 PF00690 Cation transporter/ATPase, N-terminus RSC3_01724 PF08340 Domain of unknown function (DUF1732) RSC3_01724 PF03755 YicC-like family, N-terminal region RSC3_01725 PF04025 Domain of unknown function (DUF370) RSC3_01726 PF00625 Guanylate kinase RSC3_01727 PF01192 RNA polymerase Rpb6 RSC3_01728 PF04127 DNA / pantothenate metabolism flavoprotein RSC3_01728 PF02441 Flavoprotein RSC3_01729 PF00271 Helicase conserved C-terminal domain RSC3_01729 PF17764 3′ DNA-binding domain (3′BD) RSC3_01729 PF18074 Primosomal protein N C-terminal domain RSC3_01729 PF18319 PriA DNA helicase Cys-rich region (CRR) domain RSC3_01729 PF04851 Type III restriction enzyme, res subunit RSC3_01730 PF01327 Polypeptide deformylase RSC3_01731 PF02911 Formyl transferase, C-terminal domain RSC3_01731 PF00551 Formyl transferase RSC3_01732 PF01189 16S rRNA methyltransferase RsmB/F RSC3_01732 PF01029 NusB family RSC3_01733 PF04055 Radical SAM superfamily RSC3_01735 PF00069 Protein kinase domain RSC3_01735 PF03793 PASTA domain RSC3_01736 PF03193 RsgA GTPase RSC3_01736 PF16745 RsgA N-terminal domain RSC3_01737 PF00834 Ribulose-phosphate 3 epimerase family RSC3_01738 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain RSC3_01738 PF04263 Thiamin pyrophosphokinase, catalytic domain RSC3_01739 PF00830 Ribosomal L28 family RSC3_01740 PF03780 Asp23 family, cell envelope-related function RSC3_01741 PF13684 Dihydroxyacetone kinase family RSC3_01741 PF02734 DAK2 domain RSC3_01742 PF13684 Dihydroxyacetone kinase family RSC3_01742 PF02734 DAK2 domain RSC3_01743 PF01842 ACT domain RSC3_01743 PF03315 Serine dehydratase beta chain RSC3_01744 PF03315 Serine dehydratase beta chain RSC3_01744 PF01842 ACT domain RSC3_01745 PF03313 Serine dehydratase alpha chain RSC3_01746 PF03313 Serine dehydratase alpha chain RSC3_01747 PF00270 DEAD/DEAH box helicase RSC3_01747 PF00271 Helicase conserved C-terminal domain RSC3_01747 PF17191 RecG wedge domain RSC3_01748 PF03061 Thioesterase superfamily RSC3_01748 PF08279 HTH domain RSC3_01749 PF02504 Fatty acid synthesis protein RSC3_01750 PF00698 Acyl transferase domain RSC3_01752 PF00550 Phosphopantetheine attachment site RSC3_01753 PF00035 Double-stranded RNA binding motif RSC3_01753 PF14622 Ribonuclease-III-like RSC3_01754 PF02463 RecF/RecN/SMC N terminal domain RSC3_01754 PF06470 SMC proteins Flexible Hinge Domain RSC3_01755 PF00448 SRP54-type protein, GTPase domain RSC3_01755 PF02881 SRP54-type protein, helical bundle domain RSC3_01756 PF04297 Putative helix-turn-helix protein, YlxM / p13 like RSC3_01757 PF00448 SRP54-type protein, GTPase domain RSC3_01757 PF02881 SRP54-type protein, helical bundle domain RSC3_01757 PF02978 Signal peptide binding domain RSC3_01758 PF00886 Ribosomal protein S16 RSC3_01760 PF11068 YlqD protein RSC3_01761 PF05239 PRC-barrel domain RSC3_01761 PF01782 RimM N-terminal domain RSC3_01762 PF01746 tRNA (Guanine-1)-methyltransferase RSC3_01763 PF01245 Ribosomal protein L19 RSC3_01764 PF01926 50S ribosome-binding GTPase RSC3_01765 PF01351 Ribonuclease HII RSC3_01767 PF01312 FlhB HrpN YscU SpaS Family RSC3_01768 PF08442 ATP-grasp domain RSC3_01768 PF00549 CoA-ligase RSC3_01769 PF00549 CoA-ligase RSC3_01769 PF02629 CoA binding domain RSC3_01770 PF02481 DNA recombination-mediator protein A RSC3_01771 PF01751 Toprim domain RSC3_01771 PF01396 Topoisomerase DNA binding C4 zinc finger RSC3_01771 PF01131 DNA topoisomerase RSC3_01772 PF01134 Glucose inhibited division protein A RSC3_01773 PF02899 Phage integrase, N-terminal SAM-like domain RSC3_01773 PF00589 Phage integrase family RSC3_01774 PF00227 Proteasome subunit RSC3_01775 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_01775 PF07724 AAA domain (Cdc48 subfamily) RSC3_01775 PF10431 C-terminal, D2-small domain, of ClpB protein RSC3_01776 PF06018 CodY GAF-like domain RSC3_01776 PF08222 CodY helix-turn-helix domain RSC3_01777 PF00460 Flagella basal body rod protein RSC3_01778 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RSC3_01778 PF00460 Flagella basal body rod protein RSC3_01779 PF02049 Flagellar hook-basal body complex protein FliE RSC3_01780 PF01514 Secretory protein of YscJ/FliF family RSC3_01780 PF08345 Flagellar M-ring protein C-terminal RSC3_01781 PF01706 FliG C-terminal domain RSC3_01781 PF14841 FliG middle domain RSC3_01781 PF14842 FliG N-terminal domain RSC3_01782 PF02108 Flagellar assembly protein FliH RSC3_01783 PF02874 ATP synthase alpha/beta family, beta-barrel domain RSC3_01783 PF18269 T3SS EscN ATPase C-terminal domain RSC3_01783 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RSC3_01784 PF02050 Flagellar FliJ protein RSC3_01786 PF02120 Flagellar hook-length control protein FliK RSC3_01787 PF03963 Flagellar hook capping protein - N-terminal region RSC3_01788 PF00460 Flagella basal body rod protein RSC3_01788 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RSC3_01789 PF06289 Flagellar and Swarming motility proteins RSC3_01790 PF03748 Flagellar basal body-associated protein FliL RSC3_01791 PF02154 Flagellar motor switch protein FliM RSC3_01791 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RSC3_01792 PF04509 CheC-like family RSC3_01792 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term RSC3_01793 PF00072 Response regulator receiver domain RSC3_01794 PF04347 Flagellar biosynthesis protein, FliO RSC3_01795 PF00813 FliP family RSC3_01796 PF01313 Bacterial export proteins, family 3 RSC3_01797 PF01311 Bacterial export proteins, family 1 RSC3_01798 PF01312 FlhB HrpN YscU SpaS Family RSC3_01799 PF00771 FHIPEP family RSC3_01800 PF00448 SRP54-type protein, GTPase domain RSC3_01801 PF10609 NUBPL iron-transfer P-loop NTPase RSC3_01802 PF01339 CheB methylesterase RSC3_01802 PF00072 Response regulator receiver domain RSC3_01803 PF00072 Response regulator receiver domain RSC3_01803 PF01339 CheB methylesterase RSC3_01804 PF01584 CheW-like domain RSC3_01804 PF02895 Signal transducing histidine kinase, homodimeric domain RSC3_01804 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_01804 PF01627 Hpt domain RSC3_01804 PF07194 P2 response regulator binding domain RSC3_01805 PF01584 CheW-like domain RSC3_01806 PF04509 CheC-like family RSC3_01807 PF03975 CheD chemotactic sensory transduction RSC3_01808 PF04545 Sigma-70, region 4 RSC3_01808 PF04539 Sigma-70 region 3 RSC3_01808 PF04542 Sigma-70 region 2 RSC3_01810 PF00318 Ribosomal protein S2 RSC3_01811 PF00889 Elongation factor TS RSC3_01812 PF00696 Amino acid kinase family RSC3_01813 PF01765 Ribosome recycling factor RSC3_01814 PF01255 Putative undecaprenyl diphosphate synthase RSC3_01816 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase RSC3_01816 PF13288 DXP reductoisomerase C-terminal domain RSC3_01816 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain RSC3_01817 PF17820 PDZ domain RSC3_01817 PF02163 Peptidase family M50 RSC3_01818 PF04073 Aminoacyl-tRNA editing domain RSC3_01818 PF03129 Anticodon binding domain RSC3_01818 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_01819 PF03129 Anticodon binding domain RSC3_01819 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_01819 PF04073 Aminoacyl-tRNA editing domain RSC3_01820 PF00929 Exonuclease RSC3_01820 PF02811 PHP domain RSC3_01820 PF14579 Helix-hairpin-helix motif RSC3_01820 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RSC3_01820 PF07733 Bacterial DNA polymerase III alpha NTPase domain RSC3_01820 PF14480 DNA polymerase III polC-type N-terminus I RSC3_01820 PF11490 DNA polymerase III polC-type N-terminus II RSC3_01821 PF00942 Cellulose binding domain RSC3_01821 PF00759 Glycosyl hydrolase family 9 RSC3_01822 PF00942 Cellulose binding domain RSC3_01822 PF02011 Glycosyl hydrolase family 48 RSC3_01822 PF00759 Glycosyl hydrolase family 9 RSC3_01823 PF00942 Cellulose binding domain RSC3_01823 PF02011 Glycosyl hydrolase family 48 RSC3_01823 PF00759 Glycosyl hydrolase family 9 RSC3_01824 PF00150 Cellulase (glycosyl hydrolase family 5) RSC3_01824 PF03442 Carbohydrate binding domain X2 RSC3_01824 PF18448 Carbohydrate binding domain RSC3_01825 PF00150 Cellulase (glycosyl hydrolase family 5) RSC3_01827 PF02576 RimP N-terminal domain RSC3_01827 PF17384 RimP C-terminal SH3 domain RSC3_01828 PF13184 NusA-like KH domain RSC3_01828 PF08529 NusA N-terminal domain RSC3_01828 PF00575 S1 RNA binding domain RSC3_01829 PF04296 Protein of unknown function (DUF448) RSC3_01830 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family RSC3_01831 PF11987 Translation-initiation factor 2 RSC3_01831 PF04760 Translation initiation factor IF-2, N-terminal region RSC3_01831 PF00009 Elongation factor Tu GTP binding domain RSC3_01832 PF04456 Protein of unknown function (DUF503) RSC3_01833 PF02033 Ribosome-binding factor A RSC3_01834 PF16198 tRNA pseudouridylate synthase B C-terminal domain RSC3_01834 PF01509 TruB family pseudouridylate synthase (N terminal domain) RSC3_01835 PF06574 FAD synthetase RSC3_01835 PF01687 Riboflavin kinase RSC3_01836 PF00312 Ribosomal protein S15 RSC3_01837 PF03725 3' exoribonuclease family, domain 2 RSC3_01837 PF00575 S1 RNA binding domain RSC3_01837 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain RSC3_01837 PF00013 KH domain RSC3_01837 PF01138 3' exoribonuclease family, domain 1 RSC3_01838 PF01522 Polysaccharide deacetylase RSC3_01839 PF05193 Peptidase M16 inactive domain RSC3_01839 PF00675 Insulinase (Peptidase family M16) RSC3_01840 PF05239 PRC-barrel domain RSC3_01841 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RSC3_01841 PF16924 Dipicolinate synthase subunit A N-terminal domain RSC3_01842 PF02441 Flavoprotein RSC3_01843 PF01118 Semialdehyde dehydrogenase, NAD binding domain RSC3_01843 PF02774 Semialdehyde dehydrogenase, dimerisation domain RSC3_01844 PF01118 Semialdehyde dehydrogenase, NAD binding domain RSC3_01844 PF02774 Semialdehyde dehydrogenase, dimerisation domain RSC3_01845 PF13840 ACT domain RSC3_01845 PF00696 Amino acid kinase family RSC3_01846 PF00701 Dihydrodipicolinate synthetase family RSC3_01847 PF00753 Metallo-beta-lactamase superfamily RSC3_01847 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain RSC3_01847 PF17770 Ribonuclease J C-terminal domain RSC3_01848 PF00574 Clp protease RSC3_01849 PF14035 YlzJ-like protein RSC3_01850 PF17854 FtsK alpha domain RSC3_01850 PF09397 Ftsk gamma domain RSC3_01850 PF01580 FtsK/SpoIIIE family RSC3_01851 PF07702 UTRA domain RSC3_01851 PF00392 Bacterial regulatory proteins, gntR family RSC3_01852 PF07690 Major Facilitator Superfamily RSC3_01853 PF05193 Peptidase M16 inactive domain RSC3_01854 PF00675 Insulinase (Peptidase family M16) RSC3_01854 PF05193 Peptidase M16 inactive domain RSC3_01856 PF11588 Protein of unknown function (DUF3243) RSC3_01857 PF11868 Protein of unknown function (DUF3388) RSC3_01858 PF13464 Domain of unknown function (DUF4115) RSC3_01859 PF01066 CDP-alcohol phosphatidyltransferase RSC3_01860 PF02464 Competence-damaged protein RSC3_01860 PF18146 Damage-inducible protein CinA KH domain RSC3_01860 PF00994 Probable molybdopterin binding domain RSC3_01861 PF00154 recA bacterial DNA recombination protein RSC3_01862 PF01966 HD domain RSC3_01862 PF12072 Domain of unknown function (DUF3552) RSC3_01862 PF00013 KH domain RSC3_01863 PF13277 YmdB-like protein RSC3_01864 PF04232 Stage V sporulation protein S (SpoVS) RSC3_01865 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_01865 PF00107 Zinc-binding dehydrogenase RSC3_01866 PF00155 Aminotransferase class I and II RSC3_01867 PF04055 Radical SAM superfamily RSC3_01867 PF00919 Uncharacterized protein family UPF0004 RSC3_01867 PF01938 TRAM domain RSC3_01868 PF06133 Control of competence regulator ComK, YlbF/YmcA RSC3_01869 PF10628 Outer spore coat protein E (CotE) RSC3_01870 PF01624 MutS domain I RSC3_01870 PF05188 MutS domain II RSC3_01870 PF05192 MutS domain III RSC3_01870 PF05190 MutS family domain IV RSC3_01870 PF00488 MutS domain V RSC3_01871 PF01119 DNA mismatch repair protein, C-terminal domain RSC3_01871 PF08676 MutL C terminal dimerisation domain RSC3_01872 PF03992 Antibiotic biosynthesis monooxygenase RSC3_01875 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_01875 PF13181 Tetratricopeptide repeat RSC3_01877 PF04740 LXG domain of WXG superfamily RSC3_01877 PF14449 Pre-toxin TG RSC3_01881 PF10668 Phage terminase small subunit RSC3_01882 PF10668 Phage terminase small subunit RSC3_01883 PF10668 Phage terminase small subunit RSC3_01884 PF04466 Phage terminase large subunit RSC3_01884 PF17288 Terminase RNAseH like domain RSC3_01885 PF04466 Phage terminase large subunit RSC3_01885 PF17288 Terminase RNAseH like domain RSC3_01886 PF04466 Phage terminase large subunit RSC3_01886 PF17288 Terminase RNAseH like domain RSC3_01887 PF04860 Phage portal protein RSC3_01888 PF04233 Phage Mu protein F like protein RSC3_01890 PF14550 Putative phage serine protease XkdF RSC3_01891 PF05065 Phage capsid family RSC3_01892 PF09393 Phage tail tube protein RSC3_01896 PF04740 LXG domain of WXG superfamily RSC3_01896 PF14449 Pre-toxin TG RSC3_01897 PF04740 LXG domain of WXG superfamily RSC3_01897 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RSC3_01901 PF07683 Cobalamin synthesis protein cobW C-terminal domain RSC3_01901 PF02492 CobW/HypB/UreG, nucleotide-binding domain RSC3_01903 PF11208 Protein of unknown function (DUF2992) RSC3_01905 PF01593 Flavin containing amine oxidoreductase RSC3_01906 PF06912 Protein of unknown function (DUF1275) RSC3_01907 PF02080 TrkA-C domain RSC3_01907 PF03471 Transporter associated domain RSC3_01907 PF00999 Sodium/hydrogen exchanger family RSC3_01908 PF07690 Major Facilitator Superfamily RSC3_01909 PF07690 Major Facilitator Superfamily RSC3_01911 PF01906 Putative heavy-metal-binding RSC3_01912 PF09335 SNARE associated Golgi protein RSC3_01913 PF00144 Beta-lactamase RSC3_01913 PF11954 Domain of unknown function (DUF3471) RSC3_01914 PF04101 Glycosyltransferase family 28 C-terminal domain RSC3_01915 PF13520 Amino acid permease RSC3_01916 PF07875 Coat F domain RSC3_01918 PF01476 LysM domain RSC3_01918 PF00704 Glycosyl hydrolases family 18 RSC3_01919 PF00440 Bacterial regulatory proteins, tetR family RSC3_01920 PF12680 SnoaL-like domain RSC3_01921 PF01370 NAD dependent epimerase/dehydratase family RSC3_01923 PF02566 OsmC-like protein RSC3_01924 PF00893 Small Multidrug Resistance protein RSC3_01925 PF00893 Small Multidrug Resistance protein RSC3_01927 PF12788 YmaF family RSC3_01929 PF17209 Hfq protein RSC3_01931 PF07972 NrdI Flavodoxin like RSC3_01932 PF00317 Ribonucleotide reductase, all-alpha domain RSC3_01932 PF08343 Ribonucleotide reductase N-terminal RSC3_01932 PF02867 Ribonucleotide reductase, barrel domain RSC3_01933 PF00268 Ribonucleotide reductase, small chain RSC3_01935 PF00753 Metallo-beta-lactamase superfamily RSC3_01936 PF01592 NifU-like N terminal domain RSC3_01937 PF01475 Ferric uptake regulator family RSC3_01938 PF07729 FCD domain RSC3_01938 PF00392 Bacterial regulatory proteins, gntR family RSC3_01939 PF13536 Putative multidrug resistance efflux transporter RSC3_01940 PF05036 Sporulation related domain RSC3_01940 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_01945 PF00440 Bacterial regulatory proteins, tetR family RSC3_01945 PF17934 Tetracyclin repressor-like, C-terminal domain RSC3_01948 PF05378 Hydantoinase/oxoprolinase N-terminal region RSC3_01948 PF01968 Hydantoinase/oxoprolinase RSC3_01951 PF02538 Hydantoinase B/oxoprolinase RSC3_01953 PF09346 SMI1 / KNR4 family (SUKH-1) RSC3_01954 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH RSC3_01954 PF04740 LXG domain of WXG superfamily RSC3_01960 PF07690 Major Facilitator Superfamily RSC3_01961 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_01964 PF03253 Urea transporter RSC3_01965 PF00547 Urease, gamma subunit RSC3_01966 PF00547 Urease, gamma subunit RSC3_01967 PF00699 Urease beta subunit RSC3_01968 PF01979 Amidohydrolase family RSC3_01968 PF00449 Urease alpha-subunit, N-terminal domain RSC3_01969 PF00449 Urease alpha-subunit, N-terminal domain RSC3_01969 PF01979 Amidohydrolase family RSC3_01970 PF02814 UreE urease accessory protein, N-terminal domain RSC3_01970 PF05194 UreE urease accessory protein, C-terminal domain RSC3_01971 PF01730 UreF RSC3_01972 PF02492 CobW/HypB/UreG, nucleotide-binding domain RSC3_01974 PF01774 UreD urease accessory protein RSC3_01975 PF13386 Cytochrome C biogenesis protein transmembrane region RSC3_01976 PF13386 Cytochrome C biogenesis protein transmembrane region RSC3_01977 PF03551 Transcriptional regulator PadR-like family RSC3_01977 PF10400 Virulence activator alpha C-term RSC3_01983 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_01983 PF17866 AAA lid domain RSC3_01984 PF01926 50S ribosome-binding GTPase RSC3_01984 PF13167 GTP-binding GTPase N-terminal RSC3_01984 PF16360 GTP-binding GTPase Middle Region RSC3_01985 PF06838 Methionine gamma-lyase RSC3_01986 PF06838 Methionine gamma-lyase RSC3_01987 PF13411 MerR HTH family regulatory protein RSC3_01988 PF00120 Glutamine synthetase, catalytic domain RSC3_01988 PF03951 Glutamine synthetase, beta-Grasp domain RSC3_01991 PF01510 N-acetylmuramoyl-L-alanine amidase RSC3_01991 PF01471 Putative peptidoglycan binding domain RSC3_01994 PF00120 Glutamine synthetase, catalytic domain RSC3_01994 PF03951 Glutamine synthetase, beta-Grasp domain RSC3_02003 PF02080 TrkA-C domain RSC3_02004 PF00999 Sodium/hydrogen exchanger family RSC3_02010 PF16302 Domain of unknown function (DUF4944) RSC3_02016 PF17934 Tetracyclin repressor-like, C-terminal domain RSC3_02016 PF00440 Bacterial regulatory proteins, tetR family RSC3_02017 PF00893 Small Multidrug Resistance protein RSC3_02018 PF00893 Small Multidrug Resistance protein RSC3_02019 PF13302 Acetyltransferase (GNAT) domain RSC3_02022 PF08534 Redoxin RSC3_02023 PF05067 Manganese containing catalase RSC3_02029 PF08360 QacR-like protein, C-terminal region RSC3_02029 PF00440 Bacterial regulatory proteins, tetR family RSC3_02030 PF01047 MarR family RSC3_02031 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_02032 PF01613 Flavin reductase like domain RSC3_02033 PF03358 NADPH-dependent FMN reductase RSC3_02037 PF00303 Thymidylate synthase RSC3_02038 PF14040 Deoxyribonuclease NucA/NucB RSC3_02039 PF00717 Peptidase S24-like RSC3_02039 PF01726 LexA DNA binding domain RSC3_02040 PF01476 LysM domain RSC3_02041 PF00239 Resolvase, N terminal domain RSC3_02042 PF05979 Bacterial protein of unknown function (DUF896) RSC3_02043 PF02779 Transketolase, pyrimidine binding domain RSC3_02043 PF02780 Transketolase, C-terminal domain RSC3_02043 PF00456 Transketolase, thiamine diphosphate binding domain RSC3_02044 PF10747 Sporulation inhibitor of replication protein SirA RSC3_02045 PF03672 Uncharacterised protein family (UPF0154) RSC3_02046 PF09388 Spo0E like sporulation regulatory protein RSC3_02047 PF02683 Cytochrome C biogenesis protein transmembrane region RSC3_02048 PF00072 Response regulator receiver domain RSC3_02049 PF07301 Protein of unknown function (DUF1453) RSC3_02050 PF11084 Protein of unknown function (DUF2621) RSC3_02052 PF08179 Small acid-soluble spore protein P family RSC3_02054 PF00330 Aconitase family (aconitate hydratase) RSC3_02054 PF00694 Aconitase C-terminal domain RSC3_02055 PF00330 Aconitase family (aconitate hydratase) RSC3_02055 PF00694 Aconitase C-terminal domain RSC3_02056 PF00578 AhpC/TSA family RSC3_02057 PF13040 Fur-regulated basic protein B RSC3_02058 PF08177 Small acid-soluble spore protein N family RSC3_02060 PF03061 Thioesterase superfamily RSC3_02065 PF01521 Iron-sulphur cluster biosynthesis RSC3_02066 PF02660 Glycerol-3-phosphate acyltransferase RSC3_02067 PF13380 CoA binding domain RSC3_02069 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02069 PF01751 Toprim domain RSC3_02069 PF00204 DNA gyrase B RSC3_02069 PF00986 DNA gyrase B subunit, carboxyl terminus RSC3_02070 PF00204 DNA gyrase B RSC3_02070 PF00986 DNA gyrase B subunit, carboxyl terminus RSC3_02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02070 PF01751 Toprim domain RSC3_02071 PF03989 DNA gyrase C-terminal domain, beta-propeller RSC3_02071 PF00521 DNA gyrase/topoisomerase IV, subunit A RSC3_02073 PF00392 Bacterial regulatory proteins, gntR family RSC3_02075 PF00596 Class II Aldolase and Adducin N-terminal domain RSC3_02076 PF11762 L-arabinose isomerase C-terminal domain RSC3_02076 PF02610 L-arabinose isomerase RSC3_02078 PF00083 Sugar (and other) transporter RSC3_02080 PF00106 short chain dehydrogenase RSC3_02083 PF01235 Sodium:alanine symporter family RSC3_02085 PF02665 Nitrate reductase gamma subunit RSC3_02086 PF02613 Nitrate reductase delta subunit RSC3_02087 PF13247 4Fe-4S dicluster domain RSC3_02087 PF14711 Respiratory nitrate reductase beta C-terminal RSC3_02088 PF00384 Molybdopterin oxidoreductase RSC3_02088 PF14710 Respiratory nitrate reductase alpha N-terminal RSC3_02088 PF01568 Molydopterin dinucleotide binding domain RSC3_02094 PF14256 YwiC-like protein RSC3_02095 PF00325 Bacterial regulatory proteins, crp family RSC3_02095 PF00027 Cyclic nucleotide-binding domain RSC3_02096 PF07690 Major Facilitator Superfamily RSC3_02098 PF00027 Cyclic nucleotide-binding domain RSC3_02098 PF13545 Crp-like helix-turn-helix domain RSC3_02099 PF00115 Cytochrome C and Quinol oxidase polypeptide I RSC3_02100 PF04405 Domain of Unknown function (DUF542) RSC3_02100 PF01814 Hemerythrin HHE cation binding domain RSC3_02101 PF07098 Protein of unknown function (DUF1360) RSC3_02102 PF00942 Cellulose binding domain RSC3_02102 PF00150 Cellulase (glycosyl hydrolase family 5) RSC3_02103 PF17452 Uncharacterized YnfE-like RSC3_02104 PF13302 Acetyltransferase (GNAT) domain RSC3_02109 PF07690 Major Facilitator Superfamily RSC3_02110 PF13229 Right handed beta helix region RSC3_02111 PF13229 Right handed beta helix region RSC3_02112 PF05525 Branched-chain amino acid transport protein RSC3_02114 PF05437 Branched-chain amino acid transport protein (AzlD) RSC3_02115 PF03591 AzlC protein RSC3_02116 PF00392 Bacterial regulatory proteins, gntR family RSC3_02116 PF00155 Aminotransferase class I and II RSC3_02117 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_02117 PF00107 Zinc-binding dehydrogenase RSC3_02118 PF12706 Beta-lactamase superfamily domain RSC3_02121 PF00378 Enoyl-CoA hydratase/isomerase RSC3_02122 PF00171 Aldehyde dehydrogenase family RSC3_02123 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase RSC3_02123 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RSC3_02124 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RSC3_02124 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_02124 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_02125 PF01238 Phosphomannose isomerase type I RSC3_02126 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_02126 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_02126 PF02378 Phosphotransferase system, EIIC RSC3_02129 PF00874 PRD domain RSC3_02129 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_02129 PF08279 HTH domain RSC3_02129 PF05043 Mga helix-turn-helix domain RSC3_02131 PF00005 ABC transporter RSC3_02132 PF00392 Bacterial regulatory proteins, gntR family RSC3_02133 PF00106 short chain dehydrogenase RSC3_02134 PF03786 D-mannonate dehydratase (UxuA) RSC3_02136 PF17137 Domain of unknown function (DUF5110) RSC3_02136 PF16338 Domain of unknown function (DUF4968) RSC3_02136 PF01055 Glycosyl hydrolases family 31 RSC3_02136 PF13802 Galactose mutarotase-like RSC3_02137 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RSC3_02138 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component RSC3_02139 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component RSC3_02140 PF03480 Bacterial extracellular solute-binding protein, family 7 RSC3_02141 PF00356 Bacterial regulatory proteins, lacI family RSC3_02142 PF01451 Low molecular weight phosphotyrosine protein phosphatase RSC3_02143 PF02040 Arsenical pump membrane protein RSC3_02144 PF08818 Domain of unknown function (DU1801) RSC3_02146 PF06800 Sugar transport protein RSC3_02147 PF02638 Glycosyl hydrolase-like 10 RSC3_02148 PF02638 Glycosyl hydrolase-like 10 RSC3_02150 PF04055 Radical SAM superfamily RSC3_02151 PF01228 Glycine radical RSC3_02151 PF02901 Pyruvate formate lyase-like RSC3_02152 PF13477 Glycosyl transferase 4-like RSC3_02152 PF00534 Glycosyl transferases group 1 RSC3_02153 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family RSC3_02156 PF00005 ABC transporter RSC3_02157 PF00440 Bacterial regulatory proteins, tetR family RSC3_02157 PF17932 Tetracyclin repressor-like, C-terminal domain RSC3_02158 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_02159 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_02160 PF07849 Protein of unknown function (DUF1641) RSC3_02162 PF12728 Helix-turn-helix domain RSC3_02164 PF13193 AMP-binding enzyme C-terminal domain RSC3_02164 PF16177 Acetyl-coenzyme A synthetase N-terminus RSC3_02164 PF00501 AMP-binding enzyme RSC3_02165 PF01039 Carboxyl transferase domain RSC3_02166 PF00378 Enoyl-CoA hydratase/isomerase RSC3_02167 PF00378 Enoyl-CoA hydratase/isomerase RSC3_02168 PF00682 HMGL-like RSC3_02169 PF00364 Biotin-requiring enzyme RSC3_02170 PF02785 Biotin carboxylase C-terminal domain RSC3_02170 PF00289 Biotin carboxylase, N-terminal domain RSC3_02170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RSC3_02172 PF00668 Condensation domain RSC3_02172 PF13193 AMP-binding enzyme C-terminal domain RSC3_02172 PF00975 Thioesterase domain RSC3_02172 PF00550 Phosphopantetheine attachment site RSC3_02172 PF00501 AMP-binding enzyme RSC3_02173 PF00501 AMP-binding enzyme RSC3_02173 PF13193 AMP-binding enzyme C-terminal domain RSC3_02173 PF00550 Phosphopantetheine attachment site RSC3_02173 PF00668 Condensation domain RSC3_02174 PF00550 Phosphopantetheine attachment site RSC3_02174 PF00668 Condensation domain RSC3_02174 PF13193 AMP-binding enzyme C-terminal domain RSC3_02174 PF00501 AMP-binding enzyme RSC3_02175 PF00550 Phosphopantetheine attachment site RSC3_02175 PF00668 Condensation domain RSC3_02175 PF13193 AMP-binding enzyme C-terminal domain RSC3_02175 PF00501 AMP-binding enzyme RSC3_02176 PF00668 Condensation domain RSC3_02176 PF00550 Phosphopantetheine attachment site RSC3_02176 PF13193 AMP-binding enzyme C-terminal domain RSC3_02176 PF00501 AMP-binding enzyme RSC3_02177 PF00668 Condensation domain RSC3_02177 PF00550 Phosphopantetheine attachment site RSC3_02177 PF00501 AMP-binding enzyme RSC3_02177 PF13193 AMP-binding enzyme C-terminal domain RSC3_02178 PF00501 AMP-binding enzyme RSC3_02178 PF13193 AMP-binding enzyme C-terminal domain RSC3_02178 PF00550 Phosphopantetheine attachment site RSC3_02178 PF00668 Condensation domain RSC3_02179 PF00550 Phosphopantetheine attachment site RSC3_02179 PF00501 AMP-binding enzyme RSC3_02179 PF00668 Condensation domain RSC3_02179 PF13193 AMP-binding enzyme C-terminal domain RSC3_02180 PF00501 AMP-binding enzyme RSC3_02180 PF13193 AMP-binding enzyme C-terminal domain RSC3_02180 PF00668 Condensation domain RSC3_02180 PF00550 Phosphopantetheine attachment site RSC3_02181 PF00501 AMP-binding enzyme RSC3_02181 PF13193 AMP-binding enzyme C-terminal domain RSC3_02182 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_02182 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_02182 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RSC3_02183 PF02525 Flavodoxin-like fold RSC3_02184 PF01638 HxlR-like helix-turn-helix RSC3_02185 PF00171 Aldehyde dehydrogenase family RSC3_02186 PF00696 Amino acid kinase family RSC3_02186 PF01472 PUA domain RSC3_02187 PF03807 NADP oxidoreductase coenzyme F420-dependent RSC3_02187 PF14748 Pyrroline-5-carboxylate reductase dimerisation RSC3_02188 PF04239 Protein of unknown function (DUF421) RSC3_02189 PF04239 Protein of unknown function (DUF421) RSC3_02191 PF01384 Phosphate transporter family RSC3_02192 PF01507 Phosphoadenosine phosphosulfate reductase family RSC3_02193 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) RSC3_02194 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_02195 PF13378 Enolase C-terminal domain-like RSC3_02195 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_02196 PF07690 Major Facilitator Superfamily RSC3_02197 PF00535 Glycosyl transferase family 2 RSC3_02200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster RSC3_02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_02201 PF01645 Conserved region in glutamate synthase RSC3_02201 PF04898 Glutamate synthase central domain RSC3_02201 PF00310 Glutamine amidotransferases class-II RSC3_02201 PF01493 GXGXG motif RSC3_02202 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_02202 PF03466 LysR substrate binding domain RSC3_02206 PF00664 ABC transporter transmembrane region RSC3_02206 PF00005 ABC transporter RSC3_02207 PF00664 ABC transporter transmembrane region RSC3_02207 PF00005 ABC transporter RSC3_02208 PF00067 Cytochrome P450 RSC3_02209 PF00106 short chain dehydrogenase RSC3_02210 PF00106 short chain dehydrogenase RSC3_02211 PF00391 PEP-utilising enzyme, mobile domain RSC3_02211 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RSC3_02212 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RSC3_02212 PF00391 PEP-utilising enzyme, mobile domain RSC3_02213 PF07690 Major Facilitator Superfamily RSC3_02214 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RSC3_02214 PF00384 Molybdopterin oxidoreductase RSC3_02214 PF01568 Molydopterin dinucleotide binding domain RSC3_02215 PF01047 MarR family RSC3_02216 PF07690 Major Facilitator Superfamily RSC3_02217 PF03845 Spore germination protein RSC3_02218 PF03845 Spore germination protein RSC3_02219 PF03845 Spore germination protein RSC3_02221 PF05504 Spore germination B3/ GerAC like, C-terminal RSC3_02222 PF05504 Spore germination B3/ GerAC like, C-terminal RSC3_02223 PF03845 Spore germination protein RSC3_02224 PF03845 Spore germination protein RSC3_02225 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_02227 PF00005 ABC transporter RSC3_02227 PF12848 ABC transporter RSC3_02228 PF12848 ABC transporter RSC3_02228 PF16326 ABC transporter C-terminal domain RSC3_02228 PF00005 ABC transporter RSC3_02229 PF02743 Cache domain RSC3_02229 PF00672 HAMP domain RSC3_02229 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_02230 PF01588 Putative tRNA binding domain RSC3_02232 PF00082 Subtilase family RSC3_02233 PF00082 Subtilase family RSC3_02234 PF17329 Family of unknown function (DUF5367) RSC3_02235 PF17932 Tetracyclin repressor-like, C-terminal domain RSC3_02235 PF00440 Bacterial regulatory proteins, tetR family RSC3_02236 PF01047 MarR family RSC3_02237 PF01966 HD domain RSC3_02239 PF14158 YndJ-like protein RSC3_02240 PF13761 Domain of unknown function (DUF4166) RSC3_02242 PF13305 Tetracyclin repressor-like, C-terminal domain RSC3_02242 PF00440 Bacterial regulatory proteins, tetR family RSC3_02243 PF00753 Metallo-beta-lactamase superfamily RSC3_02244 PF06445 GyrI-like small molecule binding domain RSC3_02247 PF08279 HTH domain RSC3_02247 PF13280 WYL domain RSC3_02249 PF01022 Bacterial regulatory protein, arsR family RSC3_02253 PF00324 Amino acid permease RSC3_02255 PF02719 Polysaccharide biosynthesis protein RSC3_02257 PF00534 Glycosyl transferases group 1 RSC3_02257 PF13439 Glycosyltransferase Family 4 RSC3_02258 PF04238 Protein of unknown function (DUF420) RSC3_02262 PF02016 LD-carboxypeptidase N-terminal domain RSC3_02262 PF17676 LD-carboxypeptidase C-terminal domain RSC3_02263 PF00474 Sodium:solute symporter family RSC3_02264 PF01476 LysM domain RSC3_02264 PF06725 3D domain RSC3_02265 PF00270 DEAD/DEAH box helicase RSC3_02265 PF00271 Helicase conserved C-terminal domain RSC3_02265 PF00570 HRDC domain RSC3_02265 PF16124 RecQ zinc-binding RSC3_02265 PF09382 RQC domain RSC3_02269 PF04237 YjbR RSC3_02270 PF07849 Protein of unknown function (DUF1641) RSC3_02271 PF01568 Molydopterin dinucleotide binding domain RSC3_02271 PF00384 Molybdopterin oxidoreductase RSC3_02271 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RSC3_02271 PF12838 4Fe-4S dicluster domain RSC3_02271 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RSC3_02273 PF04740 LXG domain of WXG superfamily RSC3_02273 PF14449 Pre-toxin TG RSC3_02277 PF07317 Flagellar regulator YcgR RSC3_02277 PF07238 PilZ domain RSC3_02284 PF13217 Protein of unknown function (DUF4025) RSC3_02289 PF01979 Amidohydrolase family RSC3_02290 PF11122 Inner spore coat protein D RSC3_02292 PF00561 alpha/beta hydrolase fold RSC3_02292 PF08386 TAP-like protein RSC3_02294 PF11122 Inner spore coat protein D RSC3_02295 PF01810 LysE type translocator RSC3_02296 PF00253 Ribosomal protein S14p/S29e RSC3_02298 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RSC3_02298 PF00391 PEP-utilising enzyme, mobile domain RSC3_02299 PF00391 PEP-utilising enzyme, mobile domain RSC3_02299 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain RSC3_02302 PF10710 Protein of unknown function (DUF2512) RSC3_02303 PF05163 DinB family RSC3_02304 PF02525 Flavodoxin-like fold RSC3_02305 PF00144 Beta-lactamase RSC3_02308 PF00155 Aminotransferase class I and II RSC3_02309 PF01258 Prokaryotic dksA/traR C4-type zinc finger RSC3_02310 PF08000 Bacterial PH domain RSC3_02312 PF00171 Aldehyde dehydrogenase family RSC3_02313 PF00171 Aldehyde dehydrogenase family RSC3_02315 PF07690 Major Facilitator Superfamily RSC3_02316 PF01636 Phosphotransferase enzyme family RSC3_02318 PF13243 Squalene-hopene cyclase C-terminal domain RSC3_02318 PF13249 Squalene-hopene cyclase N-terminal domain RSC3_02319 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RSC3_02319 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RSC3_02321 PF00209 Sodium:neurotransmitter symporter family RSC3_02322 PF00209 Sodium:neurotransmitter symporter family RSC3_02323 PF01758 Sodium Bile acid symporter family RSC3_02324 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RSC3_02324 PF02817 e3 binding domain RSC3_02324 PF00364 Biotin-requiring enzyme RSC3_02325 PF00676 Dehydrogenase E1 component RSC3_02325 PF02779 Transketolase, pyrimidine binding domain RSC3_02325 PF16870 2-oxoglutarate dehydrogenase C-terminal RSC3_02326 PF00092 von Willebrand factor type A domain RSC3_02327 PF07728 AAA domain (dynein-related subfamily) RSC3_02328 PF13627 Prokaryotic lipoprotein-attachment site RSC3_02328 PF00080 Copper/zinc superoxide dismutase (SODC) RSC3_02329 PF01476 LysM domain RSC3_02329 PF00877 NlpC/P60 family RSC3_02331 PF01554 MatE RSC3_02332 PF02585 GlcNAc-PI de-N-acetylase RSC3_02333 PF08830 Protein of unknown function (DUF1806) RSC3_02335 PF00892 EamA-like transporter family RSC3_02336 PF00892 EamA-like transporter family RSC3_02338 PF03330 Lytic transglycolase RSC3_02341 PF01638 HxlR-like helix-turn-helix RSC3_02342 PF00881 Nitroreductase family RSC3_02343 PF01738 Dienelactone hydrolase family RSC3_02344 PF11755 Protein of unknown function (DUF3311) RSC3_02345 PF00474 Sodium:solute symporter family RSC3_02346 PF00474 Sodium:solute symporter family RSC3_02347 PF17820 PDZ domain RSC3_02347 PF03572 Peptidase family S41 RSC3_02347 PF01471 Putative peptidoglycan binding domain RSC3_02348 PF08241 Methyltransferase domain RSC3_02350 PF02557 D-alanyl-D-alanine carboxypeptidase RSC3_02351 PF01048 Phosphorylase superfamily RSC3_02352 PF03773 Predicted permease RSC3_02355 PF14191 YodL-like RSC3_02356 PF01569 PAP2 superfamily RSC3_02357 PF14162 YozD-like protein RSC3_02360 PF06855 YozE SAM-like fold RSC3_02361 PF14122 YokU-like protein, putative antitoxin RSC3_02362 PF12544 Lysine-2,3-aminomutase RSC3_02363 PF12544 Lysine-2,3-aminomutase RSC3_02364 PF00583 Acetyltransferase (GNAT) family RSC3_02365 PF01546 Peptidase family M20/M25/M40 RSC3_02365 PF07687 Peptidase dimerisation domain RSC3_02366 PF01144 Coenzyme A transferase RSC3_02367 PF01144 Coenzyme A transferase RSC3_02368 PF00202 Aminotransferase class-III RSC3_02369 PF00202 Aminotransferase class-III RSC3_02372 PF00583 Acetyltransferase (GNAT) family RSC3_02373 PF01641 SelR domain RSC3_02374 PF01625 Peptide methionine sulfoxide reductase RSC3_02375 PF01047 MarR family RSC3_02377 PF07694 5TMR of 5TMR-LYT RSC3_02377 PF00990 Diguanylate cyclase, GGDEF domain RSC3_02379 PF01554 MatE RSC3_02381 PF17431 Uncharacterized YmpT-like RSC3_02382 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) RSC3_02383 PF13472 GDSL-like Lipase/Acylhydrolase family RSC3_02384 PF02630 SCO1/SenC RSC3_02385 PF02645 Uncharacterised protein, DegV family COG1307 RSC3_02386 PF10751 Protein of unknown function (DUF2535) RSC3_02387 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_02387 PF00585 C-terminal regulatory domain of Threonine dehydratase RSC3_02389 PF01590 GAF domain RSC3_02389 PF00158 Sigma-54 interaction domain RSC3_02390 PF08461 Ribonuclease R winged-helix domain RSC3_02390 PF00158 Sigma-54 interaction domain RSC3_02391 PF03006 Haemolysin-III related RSC3_02393 PF00186 Dihydrofolate reductase RSC3_02394 PF04608 Phosphatidylglycerophosphatase A RSC3_02395 PF14005 YpjP-like protein RSC3_02397 PF04445 Putative SAM-dependent methyltransferase RSC3_02398 PF06491 Disulphide isomerase RSC3_02399 PF00920 Dehydratase family RSC3_02401 PF08712 Scaffold protein Nfu/NifU N terminal RSC3_02401 PF13769 Virulence factor RSC3_02402 PF01966 HD domain RSC3_02403 PF00255 Glutathione peroxidase RSC3_02404 PF01268 Formate--tetrahydrofolate ligase RSC3_02405 PF04204 Homoserine O-succinyltransferase RSC3_02406 PF00534 Glycosyl transferases group 1 RSC3_02406 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RSC3_02408 PF00313 'Cold-shock' DNA-binding domain RSC3_02410 PF10819 Protein of unknown function (DUF2564) RSC3_02411 PF10782 Zinc-finger RSC3_02412 PF13456 Reverse transcriptase-like RSC3_02413 PF02592 Putative vitamin uptake transporter RSC3_02414 PF13456 Reverse transcriptase-like RSC3_02416 PF01367 5'-3' exonuclease, C-terminal SAM fold RSC3_02416 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RSC3_02418 PF10752 Protein of unknown function (DUF2533) RSC3_02419 PF00350 Dynamin family RSC3_02420 PF00350 Dynamin family RSC3_02422 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family RSC3_02423 PF02797 Chalcone and stilbene synthases, C-terminal domain RSC3_02423 PF00195 Chalcone and stilbene synthases, N-terminal domain RSC3_02424 PF02797 Chalcone and stilbene synthases, C-terminal domain RSC3_02424 PF00195 Chalcone and stilbene synthases, N-terminal domain RSC3_02426 PF00860 Permease family RSC3_02427 PF00156 Phosphoribosyl transferase domain RSC3_02428 PF02074 Carboxypeptidase Taq (M32) metallopeptidase RSC3_02429 PF13307 Helicase C-terminal domain RSC3_02430 PF13307 Helicase C-terminal domain RSC3_02434 PF01170 Putative RNA methylase family UPF0020 RSC3_02434 PF02926 THUMP domain RSC3_02435 PF05103 DivIVA protein RSC3_02436 PF06908 YspA SLOG family RSC3_02437 PF11122 Inner spore coat protein D RSC3_02439 PF13482 RNase_H superfamily RSC3_02440 PF00270 DEAD/DEAH box helicase RSC3_02440 PF09369 Domain of unknown function (DUF1998) RSC3_02440 PF00271 Helicase conserved C-terminal domain RSC3_02441 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RSC3_02443 PF14179 YppG-like protein RSC3_02444 PF14178 YppF-like protein RSC3_02445 PF08807 Bacterial domain of unknown function (DUF1798) RSC3_02448 PF10720 Protein of unknown function (DUF2515) RSC3_02449 PF03838 Recombination protein U RSC3_02450 PF00905 Penicillin binding protein transpeptidase domain RSC3_02450 PF00912 Transglycosylase RSC3_02453 PF00633 Helix-hairpin-helix motif RSC3_02453 PF00730 HhH-GPD superfamily base excision DNA repair protein RSC3_02453 PF10576 Iron-sulfur binding domain of endonuclease III RSC3_02454 PF07261 Replication initiation and membrane attachment RSC3_02455 PF00152 tRNA synthetases class II (D, K and N) RSC3_02455 PF01336 OB-fold nucleic acid binding domain RSC3_02456 PF00155 Aminotransferase class I and II RSC3_02457 PF17881 Domain of unknown function (DUF5590) RSC3_02457 PF03413 Peptidase propeptide and YPEB domain RSC3_02458 PF14084 Protein of unknown function (DUF4264) RSC3_02459 PF04851 Type III restriction enzyme, res subunit RSC3_02459 PF13307 Helicase C-terminal domain RSC3_02459 PF00929 Exonuclease RSC3_02460 PF02261 Aspartate decarboxylase RSC3_02461 PF02569 Pantoate-beta-alanine ligase RSC3_02462 PF02548 Ketopantoate hydroxymethyltransferase RSC3_02463 PF02237 Biotin protein ligase C terminal domain RSC3_02463 PF03099 Biotin/lipoate A/B protein ligase family RSC3_02463 PF08279 HTH domain RSC3_02464 PF01743 Poly A polymerase head domain RSC3_02464 PF12627 Probable RNA and SrmB- binding site of polymerase A RSC3_02464 PF13735 tRNA nucleotidyltransferase domain 2 putative RSC3_02465 PF13439 Glycosyltransferase Family 4 RSC3_02465 PF00534 Glycosyl transferases group 1 RSC3_02466 PF02585 GlcNAc-PI de-N-acetylase RSC3_02467 PF02142 MGS-like domain RSC3_02468 PF01113 Dihydrodipicolinate reductase, N-terminus RSC3_02468 PF05173 Dihydrodipicolinate reductase, C-terminus RSC3_02469 PF03819 MazG nucleotide pyrophosphohydrolase domain RSC3_02470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_02470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_02471 PF09577 Sporulation protein YpjB (SpoYpjB) RSC3_02472 PF07187 Protein of unknown function (DUF1405) RSC3_02473 PF00032 Cytochrome b(C-terminal)/b6/petD RSC3_02473 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RSC3_02474 PF00033 Cytochrome b/b6/petB RSC3_02475 PF00355 Rieske [2Fe-2S] domain RSC3_02476 PF10673 Protein of unknown function (DUF2487) RSC3_02477 PF08858 IDEAL domain RSC3_02477 PF08864 UPF0302 domain RSC3_02479 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RSC3_02480 PF02153 Prephenate dehydrogenase RSC3_02480 PF01842 ACT domain RSC3_02481 PF00155 Aminotransferase class I and II RSC3_02482 PF00290 Tryptophan synthase alpha chain RSC3_02483 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_02484 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase RSC3_02485 PF00218 Indole-3-glycerol phosphate synthase RSC3_02486 PF02885 Glycosyl transferase family, helical bundle domain RSC3_02486 PF00591 Glycosyl transferase family, a/b domain RSC3_02487 PF04715 Anthranilate synthase component I, N terminal region RSC3_02487 PF00425 chorismate binding enzyme RSC3_02488 PF07736 Chorismate mutase type I RSC3_02489 PF01761 3-dehydroquinate synthase RSC3_02490 PF01264 Chorismate synthase RSC3_02491 PF01739 CheR methyltransferase, SAM binding domain RSC3_02491 PF03705 CheR methyltransferase, all-alpha domain RSC3_02492 PF00334 Nucleoside diphosphate kinase RSC3_02493 PF00348 Polyprenyl synthetase RSC3_02494 PF01209 ubiE/COQ5 methyltransferase family RSC3_02495 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 RSC3_02496 PF02081 Tryptophan RNA-binding attenuator protein RSC3_02497 PF01227 GTP cyclohydrolase I RSC3_02498 PF00216 Bacterial DNA-binding protein RSC3_02499 PF09547 Stage IV sporulation protein A (spore_IV_A) RSC3_02502 PF10966 Protein of unknown function (DUF2768) RSC3_02503 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus RSC3_02503 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus RSC3_02504 PF01926 50S ribosome-binding GTPase RSC3_02504 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal RSC3_02506 PF14045 YIEGIA protein RSC3_02508 PF14140 YpzI-like protein RSC3_02509 PF01070 FMN-dependent dehydrogenase RSC3_02510 PF00575 S1 RNA binding domain RSC3_02511 PF02224 Cytidylate kinase RSC3_02512 PF17313 Family of unknown function (DUF5359) RSC3_02513 PF03413 Peptidase propeptide and YPEB domain RSC3_02513 PF14620 YpeB sporulation RSC3_02514 PF07486 Cell Wall Hydrolase RSC3_02514 PF01471 Putative peptidoglycan binding domain RSC3_02515 PF13367 PrsW family intramembrane metalloprotease RSC3_02516 PF00710 Asparaginase, N-terminal RSC3_02516 PF17763 Glutaminase/Asparaginase C-terminal domain RSC3_02517 PF17763 Glutaminase/Asparaginase C-terminal domain RSC3_02517 PF00710 Asparaginase, N-terminal RSC3_02519 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RSC3_02519 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RSC3_02520 PF05389 Negative regulator of genetic competence (MecA) RSC3_02521 PF00149 Calcineurin-like phosphoesterase RSC3_02522 PF10864 Protein of unknown function (DUF2663) RSC3_02523 PF01476 LysM domain RSC3_02524 PF02517 CPBP intramembrane metalloprotease RSC3_02526 PF00270 DEAD/DEAH box helicase RSC3_02526 PF00271 Helicase conserved C-terminal domain RSC3_02527 PF14493 Helix-turn-helix domain RSC3_02529 PF12822 ECF transporter, substrate-specific component RSC3_02530 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RSC3_02530 PF01842 ACT domain RSC3_02530 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_02531 PF04225 Opacity-associated protein A LysM-like domain RSC3_02531 PF01551 Peptidase family M23 RSC3_02533 PF04542 Sigma-70 region 2 RSC3_02533 PF08281 Sigma-70, region 4 RSC3_02534 PF03816 Cell envelope-related transcriptional attenuator domain RSC3_02535 PF01522 Polysaccharide deacetylase RSC3_02538 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02538 PF00512 His Kinase A (phospho-acceptor) domain RSC3_02539 PF00486 Transcriptional regulatory protein, C terminal RSC3_02539 PF00072 Response regulator receiver domain RSC3_02540 PF00672 HAMP domain RSC3_02540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02540 PF18698 Histidine kinase sensor domain RSC3_02540 PF00512 His Kinase A (phospho-acceptor) domain RSC3_02540 PF00989 PAS fold RSC3_02541 PF00072 Response regulator receiver domain RSC3_02541 PF00486 Transcriptional regulatory protein, C terminal RSC3_02542 PF01578 Cytochrome C assembly protein RSC3_02543 PF01578 Cytochrome C assembly protein RSC3_02544 PF05140 ResB-like family RSC3_02545 PF05140 ResB-like family RSC3_02546 PF00578 AhpC/TSA family RSC3_02547 PF01479 S4 domain RSC3_02547 PF00849 RNA pseudouridylate synthase RSC3_02548 PF07670 Nucleoside recognition RSC3_02549 PF07670 Nucleoside recognition RSC3_02550 PF07943 Penicillin-binding protein 5, C-terminal domain RSC3_02550 PF00768 D-alanyl-D-alanine carboxypeptidase RSC3_02551 PF07943 Penicillin-binding protein 5, C-terminal domain RSC3_02551 PF00768 D-alanyl-D-alanine carboxypeptidase RSC3_02552 PF13047 Protein of unknown function (DUF3907) RSC3_02553 PF04079 Segregation and condensation complex subunit ScpB RSC3_02554 PF02616 Segregation and condensation protein ScpA RSC3_02556 PF03745 Domain of unknown function (DUF309) RSC3_02557 PF00583 Acetyltransferase (GNAT) family RSC3_02558 PF00885 6,7-dimethyl-8-ribityllumazine synthase RSC3_02559 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase RSC3_02559 PF00925 GTP cyclohydrolase II RSC3_02560 PF00677 Lumazine binding domain RSC3_02561 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RSC3_02561 PF01872 RibD C-terminal domain RSC3_02563 PF00149 Calcineurin-like phosphoesterase RSC3_02565 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_02566 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD RSC3_02567 PF06207 Protein of unknown function (DUF1002) RSC3_02568 PF05908 Poly-gamma-glutamate hydrolase RSC3_02569 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RSC3_02569 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RSC3_02570 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain RSC3_02570 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain RSC3_02572 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_02573 PF14097 Stage V sporulation protein AE1 RSC3_02574 PF07451 Stage V sporulation protein AD (SpoVAD) RSC3_02575 PF03862 SpoVAC/SpoVAEB sporulation membrane protein RSC3_02576 PF13782 Stage V sporulation protein AB RSC3_02577 PF12164 Stage V sporulation protein AA RSC3_02578 PF04539 Sigma-70 region 3 RSC3_02578 PF04545 Sigma-70, region 4 RSC3_02578 PF04542 Sigma-70 region 2 RSC3_02579 PF13581 Histidine kinase-like ATPase domain RSC3_02580 PF01740 STAS domain RSC3_02581 PF07943 Penicillin-binding protein 5, C-terminal domain RSC3_02581 PF00768 D-alanyl-D-alanine carboxypeptidase RSC3_02582 PF01048 Phosphorylase superfamily RSC3_02583 PF01676 Metalloenzyme superfamily RSC3_02584 PF00589 Phage integrase family RSC3_02584 PF02899 Phage integrase, N-terminal SAM-like domain RSC3_02585 PF14004 Protein of unknown function (DUF4227) RSC3_02586 PF01475 Ferric uptake regulator family RSC3_02587 PF01944 Stage II sporulation protein M RSC3_02588 PF02378 Phosphotransferase system, EIIC RSC3_02589 PF02378 Phosphotransferase system, EIIC RSC3_02590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_02591 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin RSC3_02594 PF13673 Acetyltransferase (GNAT) domain RSC3_02596 PF00293 NUDIX domain RSC3_02597 PF13072 Mother cell inhibitor of FtsZ RSC3_02598 PF00440 Bacterial regulatory proteins, tetR family RSC3_02599 PF13564 DoxX-like family RSC3_02600 PF00248 Aldo/keto reductase family RSC3_02602 PF12146 Serine aminopeptidase, S33 RSC3_02603 PF10827 Protein of unknown function (DUF2552) RSC3_02604 PF01521 Iron-sulphur cluster biosynthesis RSC3_02606 PF13673 Acetyltransferase (GNAT) domain RSC3_02606 PF04229 GrpB protein RSC3_02607 PF03992 Antibiotic biosynthesis monooxygenase RSC3_02608 PF01674 Lipase (class 2) RSC3_02609 PF01674 Lipase (class 2) RSC3_02611 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_02612 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02613 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02614 PF00005 ABC transporter RSC3_02615 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_02615 PF00005 ABC transporter RSC3_02616 PF01554 MatE RSC3_02619 PF08863 YolD-like protein RSC3_02620 PF00817 impB/mucB/samB family RSC3_02620 PF11799 impB/mucB/samB family C-terminal domain RSC3_02620 PF11798 IMS family HHH motif RSC3_02621 PF14164 YqzH-like protein RSC3_02622 PF07690 Major Facilitator Superfamily RSC3_02624 PF00485 Phosphoribulokinase / Uridine kinase family RSC3_02627 PF00005 ABC transporter RSC3_02629 PF01569 PAP2 superfamily RSC3_02632 PF00005 ABC transporter RSC3_02633 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02633 PF00512 His Kinase A (phospho-acceptor) domain RSC3_02634 PF00072 Response regulator receiver domain RSC3_02634 PF00486 Transcriptional regulatory protein, C terminal RSC3_02635 PF00668 Condensation domain RSC3_02635 PF13193 AMP-binding enzyme C-terminal domain RSC3_02635 PF00501 AMP-binding enzyme RSC3_02635 PF00550 Phosphopantetheine attachment site RSC3_02635 PF00975 Thioesterase domain RSC3_02636 PF00975 Thioesterase domain RSC3_02636 PF00550 Phosphopantetheine attachment site RSC3_02636 PF13193 AMP-binding enzyme C-terminal domain RSC3_02636 PF00668 Condensation domain RSC3_02636 PF00501 AMP-binding enzyme RSC3_02637 PF00501 AMP-binding enzyme RSC3_02637 PF00975 Thioesterase domain RSC3_02637 PF13193 AMP-binding enzyme C-terminal domain RSC3_02637 PF00550 Phosphopantetheine attachment site RSC3_02637 PF00668 Condensation domain RSC3_02638 PF13193 AMP-binding enzyme C-terminal domain RSC3_02638 PF00501 AMP-binding enzyme RSC3_02638 PF18563 TubC N-terminal docking domain RSC3_02638 PF00550 Phosphopantetheine attachment site RSC3_02638 PF00668 Condensation domain RSC3_02639 PF13193 AMP-binding enzyme C-terminal domain RSC3_02639 PF00550 Phosphopantetheine attachment site RSC3_02639 PF18563 TubC N-terminal docking domain RSC3_02639 PF00501 AMP-binding enzyme RSC3_02639 PF00668 Condensation domain RSC3_02640 PF00501 AMP-binding enzyme RSC3_02640 PF13193 AMP-binding enzyme C-terminal domain RSC3_02640 PF00668 Condensation domain RSC3_02640 PF00550 Phosphopantetheine attachment site RSC3_02641 PF00550 Phosphopantetheine attachment site RSC3_02641 PF00501 AMP-binding enzyme RSC3_02641 PF00668 Condensation domain RSC3_02641 PF13193 AMP-binding enzyme C-terminal domain RSC3_02642 PF00501 AMP-binding enzyme RSC3_02642 PF13193 AMP-binding enzyme C-terminal domain RSC3_02642 PF00668 Condensation domain RSC3_02642 PF00550 Phosphopantetheine attachment site RSC3_02643 PF00550 Phosphopantetheine attachment site RSC3_02643 PF00668 Condensation domain RSC3_02643 PF13193 AMP-binding enzyme C-terminal domain RSC3_02643 PF00501 AMP-binding enzyme RSC3_02645 PF00975 Thioesterase domain RSC3_02646 PF07690 Major Facilitator Superfamily RSC3_02647 PF07690 Major Facilitator Superfamily RSC3_02649 PF05908 Poly-gamma-glutamate hydrolase RSC3_02650 PF00106 short chain dehydrogenase RSC3_02651 PF00753 Metallo-beta-lactamase superfamily RSC3_02652 PF00753 Metallo-beta-lactamase superfamily RSC3_02653 PF03807 NADP oxidoreductase coenzyme F420-dependent RSC3_02653 PF14748 Pyrroline-5-carboxylate reductase dimerisation RSC3_02654 PF01546 Peptidase family M20/M25/M40 RSC3_02655 PF01546 Peptidase family M20/M25/M40 RSC3_02656 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RSC3_02657 PF12146 Serine aminopeptidase, S33 RSC3_02658 PF00471 Ribosomal protein L33 RSC3_02659 PF12706 Beta-lactamase superfamily domain RSC3_02659 PF00753 Metallo-beta-lactamase superfamily RSC3_02660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain RSC3_02660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain RSC3_02663 PF16868 NMT1-like family RSC3_02664 PF07702 UTRA domain RSC3_02664 PF00392 Bacterial regulatory proteins, gntR family RSC3_02665 PF00232 Glycosyl hydrolase family 1 RSC3_02666 PF02378 Phosphotransferase system, EIIC RSC3_02667 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RSC3_02668 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_02669 PF00245 Alkaline phosphatase RSC3_02671 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RSC3_02671 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RSC3_02672 PF00817 impB/mucB/samB family RSC3_02672 PF11799 impB/mucB/samB family C-terminal domain RSC3_02672 PF11798 IMS family HHH motif RSC3_02674 PF02096 60Kd inner membrane protein RSC3_02675 PF01546 Peptidase family M20/M25/M40 RSC3_02675 PF07687 Peptidase dimerisation domain RSC3_02676 PF01039 Carboxyl transferase domain RSC3_02677 PF01039 Carboxyl transferase domain RSC3_02679 PF06081 Aromatic acid exporter family member 1 RSC3_02679 PF11728 Putative aromatic acid exporter C-terminal domain RSC3_02680 PF00005 ABC transporter RSC3_02681 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02682 PF00497 Bacterial extracellular solute-binding proteins, family 3 RSC3_02683 PF06491 Disulphide isomerase RSC3_02684 PF00781 Diacylglycerol kinase catalytic domain RSC3_02686 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) RSC3_02686 PF00364 Biotin-requiring enzyme RSC3_02686 PF02817 e3 binding domain RSC3_02687 PF02779 Transketolase, pyrimidine binding domain RSC3_02687 PF02780 Transketolase, C-terminal domain RSC3_02688 PF00676 Dehydrogenase E1 component RSC3_02689 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain RSC3_02689 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_02690 PF00871 Acetokinase family RSC3_02691 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RSC3_02691 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RSC3_02692 PF01515 Phosphate acetyl/butaryl transferase RSC3_02693 PF00158 Sigma-54 interaction domain RSC3_02693 PF00989 PAS fold RSC3_02693 PF02954 Bacterial regulatory protein, Fis family RSC3_02694 PF11118 Protein of unknown function (DUF2627) RSC3_02695 PF03009 Glycerophosphoryl diester phosphodiesterase family RSC3_02696 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_02701 PF00072 Response regulator receiver domain RSC3_02701 PF08769 Sporulation initiation factor Spo0A C terminal RSC3_02702 PF17820 PDZ domain RSC3_02702 PF05580 SpoIVB peptidase S55 RSC3_02703 PF13476 AAA domain RSC3_02704 PF01316 Arginine repressor, DNA binding domain RSC3_02704 PF02863 Arginine repressor, C-terminal domain RSC3_02705 PF01728 FtsJ-like methyltransferase RSC3_02705 PF01479 S4 domain RSC3_02706 PF02780 Transketolase, C-terminal domain RSC3_02706 PF02779 Transketolase, pyrimidine binding domain RSC3_02706 PF13292 1-deoxy-D-xylulose-5-phosphate synthase RSC3_02708 PF00348 Polyprenyl synthetase RSC3_02709 PF02609 Exonuclease VII small subunit RSC3_02710 PF02601 Exonuclease VII, large subunit RSC3_02710 PF13742 OB-fold nucleic acid binding domain RSC3_02711 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain RSC3_02711 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain RSC3_02712 PF01029 NusB family RSC3_02713 PF03780 Asp23 family, cell envelope-related function RSC3_02714 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain RSC3_02714 PF00289 Biotin carboxylase, N-terminal domain RSC3_02714 PF02785 Biotin carboxylase C-terminal domain RSC3_02715 PF00364 Biotin-requiring enzyme RSC3_02716 PF12685 SpoIIIAH-like protein RSC3_02718 PF09581 Stage III sporulation protein AF (Spore_III_AF) RSC3_02719 PF09546 Stage III sporulation protein AE (spore_III_AE) RSC3_02720 PF06686 Stage III sporulation protein AC/AD protein family RSC3_02721 PF06686 Stage III sporulation protein AC/AD protein family RSC3_02722 PF09548 Stage III sporulation protein AB (spore_III_AB) RSC3_02724 PF10942 Protein of unknown function (DUF2619) RSC3_02726 PF09285 Elongation factor P, C-terminal RSC3_02726 PF01132 Elongation factor P (EF-P) OB domain RSC3_02726 PF08207 Elongation factor P (EF-P) KOW-like domain RSC3_02727 PF00557 Metallopeptidase family M24 RSC3_02727 PF01321 Creatinase/Prolidase N-terminal domain RSC3_02728 PF01220 Dehydroquinase class II RSC3_02729 PF11085 Conserved membrane protein YqhR RSC3_02730 PF07136 Protein of unknown function (DUF1385) RSC3_02732 PF01734 Patatin-like phospholipase RSC3_02733 PF01325 Iron dependent repressor, N-terminal DNA binding domain RSC3_02733 PF02742 Iron dependent repressor, metal binding and dimerisation domain RSC3_02734 PF03099 Biotin/lipoate A/B protein ligase family RSC3_02735 PF00581 Rhodanese-like domain RSC3_02736 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RSC3_02737 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02738 PF00005 ABC transporter RSC3_02738 PF00571 CBS domain RSC3_02739 PF02347 Glycine cleavage system P-protein RSC3_02740 PF02347 Glycine cleavage system P-protein RSC3_02741 PF02347 Glycine cleavage system P-protein RSC3_02742 PF08669 Glycine cleavage T-protein C-terminal barrel domain RSC3_02742 PF01571 Aminomethyltransferase folate-binding domain RSC3_02743 PF00176 SNF2 family N-terminal domain RSC3_02743 PF00271 Helicase conserved C-terminal domain RSC3_02744 PF11079 Bacterial protein YqhG of unknown function RSC3_02745 PF08671 Anti-repressor SinI RSC3_02746 PF01381 Helix-turn-helix RSC3_02746 PF08671 Anti-repressor SinI RSC3_02747 PF12389 Camelysin metallo-endopeptidase RSC3_02750 PF13028 Protein of unknown function (DUF3889) RSC3_02751 PF14038 YqzE-like protein RSC3_02753 PF15980 Putative Competence protein ComGF RSC3_02755 PF07963 Prokaryotic N-terminal methylation motif RSC3_02756 PF07963 Prokaryotic N-terminal methylation motif RSC3_02757 PF00482 Type II secretion system (T2SS), protein F RSC3_02758 PF00437 Type II/IV secretion system protein RSC3_02759 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain RSC3_02759 PF01740 STAS domain RSC3_02760 PF03960 ArsC family RSC3_02761 PF11117 Protein of unknown function (DUF2626) RSC3_02762 PF00753 Metallo-beta-lactamase superfamily RSC3_02763 PF10958 Protein of unknown function (DUF2759) RSC3_02764 PF01910 Thiamine-binding protein RSC3_02766 PF00246 Zinc carboxypeptidase RSC3_02768 PF01497 Periplasmic binding protein RSC3_02769 PF00884 Sulfatase RSC3_02770 PF00480 ROK family RSC3_02771 PF06014 Bacterial protein of unknown function (DUF910) RSC3_02772 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_02773 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_02774 PF01694 Rhomboid family RSC3_02776 PF01812 5-formyltetrahydrofolate cyclo-ligase family RSC3_02777 PF00471 Ribosomal protein L33 RSC3_02779 PF13439 Glycosyltransferase Family 4 RSC3_02779 PF00534 Glycosyl transferases group 1 RSC3_02785 PF09383 NIL domain RSC3_02785 PF00005 ABC transporter RSC3_02786 PF00005 ABC transporter RSC3_02791 PF00005 ABC transporter RSC3_02792 PF00005 ABC transporter RSC3_02793 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02794 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02795 PF12849 PBP superfamily domain RSC3_02796 PF00905 Penicillin binding protein transpeptidase domain RSC3_02796 PF03717 Penicillin-binding Protein dimerisation domain RSC3_02797 PF07690 Major Facilitator Superfamily RSC3_02798 PF02777 Iron/manganese superoxide dismutases, C-terminal domain RSC3_02798 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain RSC3_02799 PF04306 Protein of unknown function (DUF456) RSC3_02800 PF06691 Protein of unknown function (DUF1189) RSC3_02802 PF04551 GcpE protein RSC3_02805 PF01475 Ferric uptake regulator family RSC3_02806 PF00950 ABC 3 transport family RSC3_02807 PF00005 ABC transporter RSC3_02808 PF00005 ABC transporter RSC3_02809 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_02809 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_02810 PF11116 Protein of unknown function (DUF2624) RSC3_02811 PF01261 Xylose isomerase-like TIM barrel RSC3_02812 PF00271 Helicase conserved C-terminal domain RSC3_02812 PF00270 DEAD/DEAH box helicase RSC3_02814 PF02401 LytB protein RSC3_02815 PF01784 NIF3 (NGG1p interacting factor 3) RSC3_02816 PF04816 tRNA (adenine(22)-N(1))-methyltransferase RSC3_02817 PF04493 Endonuclease V RSC3_02822 PF04740 LXG domain of WXG superfamily RSC3_02822 PF14449 Pre-toxin TG RSC3_02822 PF14431 YwqJ-like deaminase RSC3_02825 PF13442 Cytochrome C oxidase, cbb3-type, subunit III RSC3_02826 PF03979 Sigma-70 factor, region 1.1 RSC3_02826 PF00140 Sigma-70 factor, region 1.2 RSC3_02826 PF04539 Sigma-70 region 3 RSC3_02826 PF04545 Sigma-70, region 4 RSC3_02826 PF04542 Sigma-70 region 2 RSC3_02828 PF10410 DnaB-helicase binding domain of primase RSC3_02828 PF08275 DNA primase catalytic core, N-terminal domain RSC3_02828 PF01807 CHC2 zinc finger RSC3_02829 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 RSC3_02830 PF03618 Kinase/pyrophosphorylase RSC3_02831 PF00571 CBS domain RSC3_02831 PF08279 HTH domain RSC3_02832 PF02092 Glycyl-tRNA synthetase beta subunit RSC3_02833 PF02091 Glycyl-tRNA synthetase alpha subunit RSC3_02834 PF02565 Recombination protein O C terminal RSC3_02834 PF11967 Recombination protein O N terminal RSC3_02835 PF14006 YqzL-like protein RSC3_02836 PF07650 KH domain RSC3_02836 PF01926 50S ribosome-binding GTPase RSC3_02837 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RSC3_02838 PF01219 Prokaryotic diacylglycerol kinase RSC3_02839 PF02130 Uncharacterized protein family UPF0054 RSC3_02840 PF01966 HD domain RSC3_02840 PF07697 7TM-HD extracellular RSC3_02840 PF07698 7TM receptor with intracellular HD hydrolase RSC3_02841 PF02562 PhoH-like protein RSC3_02842 PF06898 Putative stage IV sporulation protein YqfD RSC3_02843 PF07873 YabP family RSC3_02845 PF12127 SigmaW regulon antibacterial RSC3_02846 PF01972 Serine dehydrogenase proteinase RSC3_02846 PF01957 NfeD-like C-terminal, partner-binding RSC3_02847 PF09424 Yqey-like protein RSC3_02848 PF01165 Ribosomal protein S21 RSC3_02849 PF02690 Na+/Pi-cotransporter RSC3_02850 PF01791 DeoC/LacD family aldolase RSC3_02851 PF01938 TRAM domain RSC3_02851 PF04055 Radical SAM superfamily RSC3_02851 PF00919 Uncharacterized protein family UPF0004 RSC3_02852 PF04452 RNA methyltransferase RSC3_02854 PF00684 DnaJ central domain RSC3_02854 PF00226 DnaJ domain RSC3_02854 PF01556 DnaJ C terminal domain RSC3_02855 PF00226 DnaJ domain RSC3_02855 PF01556 DnaJ C terminal domain RSC3_02855 PF00684 DnaJ central domain RSC3_02856 PF00012 Hsp70 protein RSC3_02857 PF01025 GrpE RSC3_02858 PF01628 HrcA protein C terminal domain RSC3_02859 PF06969 HemN C-terminal domain RSC3_02859 PF04055 Radical SAM superfamily RSC3_02860 PF00679 Elongation factor G C-terminus RSC3_02860 PF06421 GTP-binding protein LepA C-terminus RSC3_02860 PF03144 Elongation factor Tu domain 2 RSC3_02860 PF00009 Elongation factor Tu GTP binding domain RSC3_02861 PF12438 Protein of unknown function (DUF3679) RSC3_02862 PF07454 Stage II sporulation protein P (SpoIIP) RSC3_02863 PF03418 Germination protease RSC3_02864 PF01649 Ribosomal protein S20 RSC3_02865 PF01638 HxlR-like helix-turn-helix RSC3_02866 PF02525 Flavodoxin-like fold RSC3_02867 PF06144 DNA polymerase III, delta subunit RSC3_02868 PF06144 DNA polymerase III, delta subunit RSC3_02869 PF14141 YqzM-like protein RSC3_02870 PF00753 Metallo-beta-lactamase superfamily RSC3_02870 PF03772 Competence protein RSC3_02870 PF13567 Domain of unknown function (DUF4131) RSC3_02871 PF00753 Metallo-beta-lactamase superfamily RSC3_02871 PF13567 Domain of unknown function (DUF4131) RSC3_02871 PF03772 Competence protein RSC3_02872 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region RSC3_02873 PF10531 SLBB domain RSC3_02875 PF14748 Pyrroline-5-carboxylate reductase dimerisation RSC3_02875 PF03807 NADP oxidoreductase coenzyme F420-dependent RSC3_02876 PF13649 Methyltransferase domain RSC3_02878 PF01966 HD domain RSC3_02879 PF01966 HD domain RSC3_02880 PF01467 Cytidylyltransferase-like RSC3_02881 PF01985 CRS1 / YhbY (CRM) domain RSC3_02882 PF01488 Shikimate / quinate 5-dehydrogenase RSC3_02882 PF08501 Shikimate dehydrogenase substrate binding domain RSC3_02882 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RSC3_02883 PF01488 Shikimate / quinate 5-dehydrogenase RSC3_02883 PF08501 Shikimate dehydrogenase substrate binding domain RSC3_02883 PF18317 Shikimate 5'-dehydrogenase C-terminal domain RSC3_02884 PF01926 50S ribosome-binding GTPase RSC3_02886 PF08970 Sporulation inhibitor A RSC3_02888 PF00657 GDSL-like Lipase/Acylhydrolase RSC3_02892 PF10057 Uncharacterized conserved protein (DUF2294) RSC3_02893 PF01568 Molydopterin dinucleotide binding domain RSC3_02893 PF00037 4Fe-4S binding domain RSC3_02893 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RSC3_02893 PF00384 Molybdopterin oxidoreductase RSC3_02893 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RSC3_02894 PF07849 Protein of unknown function (DUF1641) RSC3_02896 PF04545 Sigma-70, region 4 RSC3_02896 PF04542 Sigma-70 region 2 RSC3_02901 PF04545 Sigma-70, region 4 RSC3_02901 PF04542 Sigma-70 region 2 RSC3_02903 PF06146 Phosphate-starvation-inducible E RSC3_02904 PF00512 His Kinase A (phospho-acceptor) domain RSC3_02905 PF00072 Response regulator receiver domain RSC3_02905 PF00486 Transcriptional regulatory protein, C terminal RSC3_02906 PF00486 Transcriptional regulatory protein, C terminal RSC3_02906 PF00072 Response regulator receiver domain RSC3_02907 PF04235 Protein of unknown function (DUF418) RSC3_02908 PF00583 Acetyltransferase (GNAT) family RSC3_02910 PF04542 Sigma-70 region 2 RSC3_02910 PF04545 Sigma-70, region 4 RSC3_02913 PF00583 Acetyltransferase (GNAT) family RSC3_02917 PF02056 Family 4 glycosyl hydrolase RSC3_02917 PF11975 Family 4 glycosyl hydrolase C-terminal domain RSC3_02918 PF01418 Helix-turn-helix domain, rpiR family RSC3_02918 PF01380 SIS domain RSC3_02921 PF13411 MerR HTH family regulatory protein RSC3_02921 PF06445 GyrI-like small molecule binding domain RSC3_02923 PF03466 LysR substrate binding domain RSC3_02923 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_02924 PF03737 Aldolase/RraA RSC3_02926 PF04303 PrpF protein RSC3_02928 PF02665 Nitrate reductase gamma subunit RSC3_02929 PF02665 Nitrate reductase gamma subunit RSC3_02930 PF02613 Nitrate reductase delta subunit RSC3_02931 PF14711 Respiratory nitrate reductase beta C-terminal RSC3_02931 PF13247 4Fe-4S dicluster domain RSC3_02932 PF14710 Respiratory nitrate reductase alpha N-terminal RSC3_02932 PF00384 Molybdopterin oxidoreductase RSC3_02932 PF01568 Molydopterin dinucleotide binding domain RSC3_02933 PF07690 Major Facilitator Superfamily RSC3_02934 PF00970 Oxidoreductase FAD-binding domain RSC3_02934 PF00042 Globin RSC3_02934 PF00175 Oxidoreductase NAD-binding domain RSC3_02936 PF00581 Rhodanese-like domain RSC3_02937 PF00753 Metallo-beta-lactamase superfamily RSC3_02939 PF00072 Response regulator receiver domain RSC3_02939 PF00196 Bacterial regulatory proteins, luxR family RSC3_02940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_02940 PF07730 Histidine kinase RSC3_02941 PF01925 Sulfite exporter TauE/SafE RSC3_02942 PF01206 Sulfurtransferase TusA RSC3_02943 PF00753 Metallo-beta-lactamase superfamily RSC3_02943 PF00581 Rhodanese-like domain RSC3_02944 PF00581 Rhodanese-like domain RSC3_02944 PF01206 Sulfurtransferase TusA RSC3_02945 PF13686 DsrE/DsrF/DrsH-like family RSC3_02946 PF02583 Metal-sensitive transcriptional repressor RSC3_02949 PF00490 Delta-aminolevulinic acid dehydratase RSC3_02950 PF00398 Ribosomal RNA adenine dimethylase RSC3_02951 PF14552 Tautomerase enzyme RSC3_02952 PF01380 SIS domain RSC3_02953 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family RSC3_02954 PF01638 HxlR-like helix-turn-helix RSC3_02955 PF00487 Fatty acid desaturase RSC3_02956 PF07730 Histidine kinase RSC3_02957 PF00196 Bacterial regulatory proteins, luxR family RSC3_02957 PF00072 Response regulator receiver domain RSC3_02958 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_02960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_02961 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle RSC3_02962 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02963 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02963 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_02964 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_02964 PF12911 N-terminal TM domain of oligopeptide transport permease C RSC3_02965 PF00005 ABC transporter RSC3_02965 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_02966 PF00005 ABC transporter RSC3_02966 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_02967 PF00005 ABC transporter RSC3_02967 PF08352 Oligopeptide/dipeptide transporter, C-terminal region RSC3_02970 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term RSC3_02970 PF12833 Helix-turn-helix domain RSC3_02971 PF00106 short chain dehydrogenase RSC3_02973 PF06445 GyrI-like small molecule binding domain RSC3_02976 PF00067 Cytochrome P450 RSC3_02977 PF00067 Cytochrome P450 RSC3_02978 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain RSC3_02978 PF04616 Glycosyl hydrolases family 43 RSC3_02981 PF00106 short chain dehydrogenase RSC3_02982 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_02982 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_02983 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_02983 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_02984 PF03613 PTS system mannose/fructose/sorbose family IID component RSC3_02985 PF03609 PTS system sorbose-specific iic component RSC3_02986 PF03830 PTS system sorbose subfamily IIB component RSC3_02987 PF03610 PTS system fructose IIA component RSC3_02988 PF03610 PTS system fructose IIA component RSC3_02988 PF00874 PRD domain RSC3_02988 PF00158 Sigma-54 interaction domain RSC3_02989 PF00874 PRD domain RSC3_02989 PF00158 Sigma-54 interaction domain RSC3_02989 PF03610 PTS system fructose IIA component RSC3_02990 PF00158 Sigma-54 interaction domain RSC3_02990 PF03610 PTS system fructose IIA component RSC3_02990 PF00874 PRD domain RSC3_02993 PF14145 YrhK-like protein RSC3_02994 PF00302 Chloramphenicol acetyltransferase RSC3_02995 PF12833 Helix-turn-helix domain RSC3_02995 PF02805 Metal binding domain of Ada RSC3_02996 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain RSC3_02996 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain RSC3_02997 PF02702 Osmosensitive K+ channel His kinase sensor domain RSC3_02998 PF02669 K+-transporting ATPase, c chain RSC3_03001 PF03814 Potassium-transporting ATPase A subunit RSC3_03002 PF03814 Potassium-transporting ATPase A subunit RSC3_03003 PF03814 Potassium-transporting ATPase A subunit RSC3_03006 PF00248 Aldo/keto reductase family RSC3_03007 PF07690 Major Facilitator Superfamily RSC3_03008 PF01638 HxlR-like helix-turn-helix RSC3_03009 PF03575 Peptidase family S51 RSC3_03010 PF02602 Uroporphyrinogen-III synthase HemD RSC3_03013 PF01497 Periplasmic binding protein RSC3_03014 PF03466 LysR substrate binding domain RSC3_03014 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_03015 PF07690 Major Facilitator Superfamily RSC3_03016 PF07690 Major Facilitator Superfamily RSC3_03018 PF00667 FAD binding domain RSC3_03018 PF00258 Flavodoxin RSC3_03018 PF00175 Oxidoreductase NAD-binding domain RSC3_03018 PF00067 Cytochrome P450 RSC3_03019 PF16295 Tetracyclin repressor-like, C-terminal domain RSC3_03019 PF00440 Bacterial regulatory proteins, tetR family RSC3_03021 PF17936 Bacterial Ig domain RSC3_03021 PF00082 Subtilase family RSC3_03022 PF08241 Methyltransferase domain RSC3_03025 PF09501 Probable sporulation protein (Bac_small_yrzI) RSC3_03027 PF14143 YrhC-like protein RSC3_03028 PF01053 Cys/Met metabolism PLP-dependent enzyme RSC3_03029 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_03030 PF01048 Phosphorylase superfamily RSC3_03031 PF13649 Methyltransferase domain RSC3_03032 PF10750 Protein of unknown function (DUF2536) RSC3_03033 PF07423 Domain of unknown function (DUF1510) RSC3_03034 PF03717 Penicillin-binding Protein dimerisation domain RSC3_03034 PF00905 Penicillin binding protein transpeptidase domain RSC3_03035 PF00905 Penicillin binding protein transpeptidase domain RSC3_03035 PF03717 Penicillin-binding Protein dimerisation domain RSC3_03036 PF03449 Transcription elongation factor, N-terminal RSC3_03036 PF01272 Transcription elongation factor, GreA/GreB, C-term RSC3_03037 PF00485 Phosphoribulokinase / Uridine kinase family RSC3_03038 PF16325 Peptidase family U32 C-terminal domain RSC3_03038 PF01136 Peptidase family U32 RSC3_03039 PF01136 Peptidase family U32 RSC3_03040 PF01596 O-methyltransferase RSC3_03041 PF02618 YceG-like family RSC3_03042 PF06949 Protein of unknown function (DUF1292) RSC3_03043 PF03652 Holliday junction resolvase RSC3_03044 PF06135 IreB regulatory phosphoprotein RSC3_03045 PF02272 DHHA1 domain RSC3_03045 PF01411 tRNA synthetases class II (A) RSC3_03045 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RSC3_03046 PF01594 AI-2E family transporter RSC3_03047 PF13056 Protein of unknown function (DUF3918) RSC3_03049 PF05239 PRC-barrel domain RSC3_03050 PF13538 UvrD-like helicase C-terminal domain RSC3_03050 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain RSC3_03050 PF14490 Helix-hairpin-helix containing domain RSC3_03051 PF07719 Tetratricopeptide repeat RSC3_03051 PF13181 Tetratricopeptide repeat RSC3_03053 PF00266 Aminotransferase class-V RSC3_03054 PF02082 Transcriptional regulator RSC3_03055 PF16193 AAA C-terminal domain RSC3_03055 PF12002 MgsA AAA+ ATPase C terminal RSC3_03055 PF05496 Holliday junction DNA helicase RuvB P-loop domain RSC3_03056 PF00899 ThiF family RSC3_03057 PF02938 GAD domain RSC3_03057 PF00152 tRNA synthetases class II (D, K and N) RSC3_03057 PF01336 OB-fold nucleic acid binding domain RSC3_03058 PF03129 Anticodon binding domain RSC3_03058 PF13393 Histidyl-tRNA synthetase RSC3_03060 PF08239 Bacterial SH3 domain RSC3_03060 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_03061 PF08239 Bacterial SH3 domain RSC3_03061 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_03062 PF02580 D-Tyr-tRNA(Tyr) deacylase RSC3_03063 PF13291 ACT domain RSC3_03063 PF04607 Region found in RelA / SpoT proteins RSC3_03063 PF02824 TGS domain RSC3_03064 PF00156 Phosphoribosyl transferase domain RSC3_03065 PF17768 RecJ OB domain RSC3_03065 PF10141 Single-strand DNA-specific exonuclease, C terminal domain RSC3_03065 PF01368 DHH family RSC3_03065 PF02272 DHHA1 domain RSC3_03066 PF06305 Lipopolysaccharide assembly protein A domain RSC3_03067 PF02080 TrkA-C domain RSC3_03068 PF07549 SecD/SecF GG Motif RSC3_03068 PF02355 Protein export membrane protein RSC3_03069 PF13797 Post-transcriptional regulator RSC3_03070 PF01943 Polysaccharide biosynthesis protein RSC3_03070 PF14667 Polysaccharide biosynthesis C-terminal domain RSC3_03071 PF04239 Protein of unknown function (DUF421) RSC3_03072 PF12670 Protein of unknown function (DUF3792) RSC3_03073 PF02699 Preprotein translocase subunit RSC3_03074 PF01702 Queuine tRNA-ribosyltransferase RSC3_03075 PF01702 Queuine tRNA-ribosyltransferase RSC3_03076 PF02547 Queuosine biosynthesis protein RSC3_03077 PF11146 Protein of unknown function (DUF2905) RSC3_03078 PF05491 RuvB C-terminal winged helix domain RSC3_03078 PF17864 RuvB AAA lid domain RSC3_03078 PF05496 Holliday junction DNA helicase RuvB P-loop domain RSC3_03079 PF07499 RuvA, C-terminal domain RSC3_03079 PF01330 RuvA N terminal domain RSC3_03080 PF08955 BofC C-terminal domain RSC3_03080 PF08977 Bypass of Forespore C, N terminal RSC3_03085 PF00672 HAMP domain RSC3_03085 PF00512 His Kinase A (phospho-acceptor) domain RSC3_03086 PF00072 Response regulator receiver domain RSC3_03086 PF00486 Transcriptional regulatory protein, C terminal RSC3_03087 PF08141 Small acid-soluble spore protein H family RSC3_03088 PF05163 DinB family RSC3_03089 PF05908 Poly-gamma-glutamate hydrolase RSC3_03092 PF01709 Transcriptional regulator RSC3_03093 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RSC3_03094 PF01476 LysM domain RSC3_03095 PF02445 Quinolinate synthetase A protein RSC3_03096 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain RSC3_03096 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain RSC3_03097 PF00890 FAD binding domain RSC3_03097 PF02910 Fumarate reductase flavoprotein C-term RSC3_03098 PF00266 Aminotransferase class-V RSC3_03099 PF00266 Aminotransferase class-V RSC3_03100 PF02829 3H domain RSC3_03100 PF08279 HTH domain RSC3_03101 PF01842 ACT domain RSC3_03101 PF00800 Prephenate dehydratase RSC3_03102 PF01842 ACT domain RSC3_03103 PF01926 50S ribosome-binding GTPase RSC3_03103 PF09269 Domain of unknown function (DUF1967) RSC3_03103 PF01018 GTP1/OBG RSC3_03105 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RSC3_03105 PF14682 Sporulation initiation phospho-transferase B, C-terminal RSC3_03106 PF01016 Ribosomal L27 protein RSC3_03107 PF04327 Cysteine protease Prp RSC3_03108 PF00829 Ribosomal prokaryotic L21 protein RSC3_03109 PF02163 Peptidase family M50 RSC3_03110 PF01551 Peptidase family M23 RSC3_03111 PF08327 Activator of Hsp90 ATPase homolog 1-like protein RSC3_03113 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain RSC3_03114 PF03775 Septum formation inhibitor MinC, C-terminal domain RSC3_03115 PF04093 rod shape-determining protein MreD RSC3_03116 PF04085 rod shape-determining protein MreC RSC3_03118 PF04002 RadC-like JAB domain RSC3_03119 PF02545 Maf-like protein RSC3_03120 PF05036 Sporulation related domain RSC3_03122 PF06750 Bacterial Peptidase A24 N-terminal domain RSC3_03122 PF01478 Type IV leader peptidase family RSC3_03123 PF02875 Mur ligase family, glutamate ligase domain RSC3_03123 PF08245 Mur ligase middle domain RSC3_03124 PF10458 Valyl tRNA synthetase tRNA binding arm RSC3_03124 PF08264 Anticodon-binding domain of tRNA RSC3_03124 PF00133 tRNA synthetases class I (I, L, M and V) RSC3_03127 PF01476 LysM domain RSC3_03128 PF00202 Aminotransferase class-III RSC3_03129 PF00490 Delta-aminolevulinic acid dehydratase RSC3_03130 PF02602 Uroporphyrinogen-III synthase HemD RSC3_03131 PF03900 Porphobilinogen deaminase, C-terminal domain RSC3_03131 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain RSC3_03132 PF01578 Cytochrome C assembly protein RSC3_03133 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain RSC3_03133 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain RSC3_03133 PF01488 Shikimate / quinate 5-dehydrogenase RSC3_03135 PF01926 50S ribosome-binding GTPase RSC3_03136 PF05362 Lon protease (S16) C-terminal proteolytic domain RSC3_03136 PF02190 ATP-dependent protease La (LON) substrate-binding domain RSC3_03136 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_03137 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_03137 PF05362 Lon protease (S16) C-terminal proteolytic domain RSC3_03139 PF07724 AAA domain (Cdc48 subfamily) RSC3_03139 PF10431 C-terminal, D2-small domain, of ClpB protein RSC3_03139 PF06689 ClpX C4-type zinc finger RSC3_03140 PF05697 Bacterial trigger factor protein (TF) RSC3_03140 PF05698 Bacterial trigger factor protein (TF) C-terminus RSC3_03140 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase RSC3_03142 PF00694 Aconitase C-terminal domain RSC3_03143 PF00330 Aconitase family (aconitate hydratase) RSC3_03144 PF00180 Isocitrate/isopropylmalate dehydrogenase RSC3_03145 PF00682 HMGL-like RSC3_03145 PF08502 LeuA allosteric (dimerisation) domain RSC3_03146 PF00682 HMGL-like RSC3_03146 PF08502 LeuA allosteric (dimerisation) domain RSC3_03147 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain RSC3_03147 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain RSC3_03148 PF01842 ACT domain RSC3_03148 PF10369 Small subunit of acetolactate synthase RSC3_03149 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RSC3_03149 PF00205 Thiamine pyrophosphate enzyme, central domain RSC3_03149 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RSC3_03150 PF01063 Amino-transferase class IV RSC3_03152 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase RSC3_03152 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain RSC3_03156 PF12850 Calcineurin-like phosphoesterase superfamily domain RSC3_03157 PF01725 Ham1 family RSC3_03158 PF03725 3' exoribonuclease family, domain 2 RSC3_03158 PF01138 3' exoribonuclease family, domain 1 RSC3_03159 PF10646 Sporulation and spore germination RSC3_03160 PF01177 Asp/Glu/Hydantoin racemase RSC3_03161 PF01047 MarR family RSC3_03162 PF00196 Bacterial regulatory proteins, luxR family RSC3_03163 PF00106 short chain dehydrogenase RSC3_03164 PF03061 Thioesterase superfamily RSC3_03165 PF13085 2Fe-2S iron-sulfur cluster binding domain RSC3_03165 PF13183 4Fe-4S dicluster domain RSC3_03166 PF00890 FAD binding domain RSC3_03166 PF02910 Fumarate reductase flavoprotein C-term RSC3_03167 PF00890 FAD binding domain RSC3_03167 PF02910 Fumarate reductase flavoprotein C-term RSC3_03168 PF02910 Fumarate reductase flavoprotein C-term RSC3_03168 PF00890 FAD binding domain RSC3_03169 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit RSC3_03170 PF10702 Protein of unknown function (DUF2507) RSC3_03171 PF13840 ACT domain RSC3_03171 PF00696 Amino acid kinase family RSC3_03171 PF01842 ACT domain RSC3_03172 PF08459 UvrC Helix-hairpin-helix N-terminal RSC3_03172 PF02151 UvrB/uvrC motif RSC3_03172 PF01541 GIY-YIG catalytic domain RSC3_03173 PF00085 Thioredoxin RSC3_03174 PF01012 Electron transfer flavoprotein domain RSC3_03174 PF00766 Electron transfer flavoprotein FAD-binding domain RSC3_03175 PF01012 Electron transfer flavoprotein domain RSC3_03176 PF00378 Enoyl-CoA hydratase/isomerase RSC3_03177 PF00440 Bacterial regulatory proteins, tetR family RSC3_03177 PF08359 YsiA-like protein, C-terminal region RSC3_03178 PF00501 AMP-binding enzyme RSC3_03178 PF13193 AMP-binding enzyme C-terminal domain RSC3_03179 PF00501 AMP-binding enzyme RSC3_03179 PF13193 AMP-binding enzyme C-terminal domain RSC3_03180 PF03994 Domain of Unknown Function (DUF350) RSC3_03181 PF00488 MutS domain V RSC3_03181 PF01713 Smr domain RSC3_03182 PF14716 Helix-hairpin-helix domain RSC3_03182 PF14791 DNA polymerase beta thumb RSC3_03182 PF02811 PHP domain RSC3_03183 PF02674 Colicin V production protein RSC3_03184 PF05164 Cell division protein ZapA RSC3_03185 PF11858 Domain of unknown function (DUF3378) RSC3_03185 PF01351 Ribonuclease HII RSC3_03190 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain RSC3_03190 PF01588 Putative tRNA binding domain RSC3_03190 PF03483 B3/4 domain RSC3_03190 PF03484 tRNA synthetase B5 domain RSC3_03190 PF03147 Ferredoxin-fold anticodon binding domain RSC3_03191 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain RSC3_03191 PF01409 tRNA synthetases class II core domain (F) RSC3_03192 PF00588 SpoU rRNA Methylase family RSC3_03192 PF08032 RNA 2'-O ribose methyltransferase substrate binding RSC3_03193 PF14098 Small, acid-soluble spore protein I RSC3_03194 PF13722 5TM C-terminal transporter carbon starvation CstA RSC3_03194 PF02554 Carbon starvation protein CstA RSC3_03195 PF02554 Carbon starvation protein CstA RSC3_03195 PF13722 5TM C-terminal transporter carbon starvation CstA RSC3_03196 PF13977 BetI-type transcriptional repressor, C-terminal RSC3_03196 PF00440 Bacterial regulatory proteins, tetR family RSC3_03197 PF03703 Bacterial PH domain RSC3_03200 PF06964 Alpha-L-arabinofuranosidase C-terminal domain RSC3_03201 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03202 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03203 PF01547 Bacterial extracellular solute-binding protein RSC3_03204 PF13685 Iron-containing alcohol dehydrogenase RSC3_03205 PF00596 Class II Aldolase and Adducin N-terminal domain RSC3_03206 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RSC3_03206 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RSC3_03207 PF11762 L-arabinose isomerase C-terminal domain RSC3_03207 PF02610 L-arabinose isomerase RSC3_03208 PF04616 Glycosyl hydrolases family 43 RSC3_03209 PF05343 M42 glutamyl aminopeptidase RSC3_03211 PF06961 Protein of unknown function (DUF1294) RSC3_03212 PF00453 Ribosomal protein L20 RSC3_03213 PF01632 Ribosomal protein L35 RSC3_03214 PF05198 Translation initiation factor IF-3, N-terminal domain RSC3_03214 PF00707 Translation initiation factor IF-3, C-terminal domain RSC3_03215 PF04172 LrgB-like family RSC3_03216 PF03788 LrgA family RSC3_03217 PF16655 PhoD-like phosphatase, N-terminal domain RSC3_03217 PF09423 PhoD-like phosphatase RSC3_03218 PF04397 LytTr DNA-binding domain RSC3_03218 PF00072 Response regulator receiver domain RSC3_03219 PF07694 5TMR of 5TMR-LYT RSC3_03219 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03219 PF06580 Histidine kinase RSC3_03221 PF13419 Haloacid dehalogenase-like hydrolase RSC3_03222 PF13419 Haloacid dehalogenase-like hydrolase RSC3_03223 PF03129 Anticodon binding domain RSC3_03223 PF02824 TGS domain RSC3_03223 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_03223 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RSC3_03224 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_03224 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain RSC3_03224 PF03129 Anticodon binding domain RSC3_03224 PF02824 TGS domain RSC3_03225 PF08812 YtxC-like family RSC3_03226 PF09335 SNARE associated Golgi protein RSC3_03227 PF07319 Primosomal protein DnaI N-terminus RSC3_03227 PF01695 IstB-like ATP binding protein RSC3_03228 PF07261 Replication initiation and membrane attachment RSC3_03229 PF07261 Replication initiation and membrane attachment RSC3_03230 PF03477 ATP cone domain RSC3_03232 PF02675 S-adenosylmethionine decarboxylase RSC3_03233 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RSC3_03233 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RSC3_03235 PF00544 Pectate lyase RSC3_03236 PF01121 Dephospho-CoA kinase RSC3_03237 PF02659 Putative manganese efflux pump RSC3_03238 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain RSC3_03238 PF06827 Zinc finger found in FPG and IleRS RSC3_03238 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain RSC3_03239 PF00476 DNA polymerase family A RSC3_03239 PF01367 5'-3' exonuclease, C-terminal SAM fold RSC3_03239 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RSC3_03240 PF01367 5'-3' exonuclease, C-terminal SAM fold RSC3_03240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain RSC3_03240 PF00476 DNA polymerase family A RSC3_03241 PF00989 PAS fold RSC3_03241 PF16736 Single Cache-like RSC3_03241 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03241 PF00512 His Kinase A (phospho-acceptor) domain RSC3_03242 PF00486 Transcriptional regulatory protein, C terminal RSC3_03242 PF00072 Response regulator receiver domain RSC3_03243 PF00056 lactate/malate dehydrogenase, NAD binding domain RSC3_03243 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain RSC3_03244 PF00180 Isocitrate/isopropylmalate dehydrogenase RSC3_03245 PF00180 Isocitrate/isopropylmalate dehydrogenase RSC3_03246 PF00285 Citrate synthase, C-terminal domain RSC3_03248 PF00722 Glycosyl hydrolases family 16 RSC3_03250 PF01545 Cation efflux family RSC3_03250 PF16916 Dimerisation domain of Zinc Transporter RSC3_03251 PF04284 Protein of unknown function (DUF441) RSC3_03252 PF01594 AI-2E family transporter RSC3_03253 PF04186 FxsA cytoplasmic membrane protein RSC3_03254 PF00391 PEP-utilising enzyme, mobile domain RSC3_03254 PF00224 Pyruvate kinase, barrel domain RSC3_03254 PF02887 Pyruvate kinase, alpha/beta domain RSC3_03255 PF00365 Phosphofructokinase RSC3_03256 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit RSC3_03257 PF17848 Acetyl-coA carboxylase zinc finger domain RSC3_03257 PF01039 Carboxyl transferase domain RSC3_03258 PF00390 Malic enzyme, N-terminal domain RSC3_03258 PF03949 Malic enzyme, NAD binding domain RSC3_03259 PF01336 OB-fold nucleic acid binding domain RSC3_03259 PF14579 Helix-hairpin-helix motif RSC3_03259 PF17657 Bacterial DNA polymerase III alpha subunit finger domain RSC3_03259 PF07733 Bacterial DNA polymerase III alpha NTPase domain RSC3_03259 PF02811 PHP domain RSC3_03260 PF14034 Sporulation protein YtrH RSC3_03263 PF01368 DHH family RSC3_03263 PF02272 DHHA1 domain RSC3_03264 PF14007 YtpI-like protein RSC3_03265 PF03061 Thioesterase superfamily RSC3_03265 PF00571 CBS domain RSC3_03265 PF07085 DRTGG domain RSC3_03265 PF00392 Bacterial regulatory proteins, gntR family RSC3_03266 PF03061 Thioesterase superfamily RSC3_03266 PF00571 CBS domain RSC3_03266 PF00392 Bacterial regulatory proteins, gntR family RSC3_03266 PF07085 DRTGG domain RSC3_03267 PF03551 Transcriptional regulator PadR-like family RSC3_03267 PF10400 Virulence activator alpha C-term RSC3_03271 PF14698 Argininosuccinate lyase C-terminal RSC3_03271 PF00206 Lyase RSC3_03272 PF00764 Arginosuccinate synthase RSC3_03273 PF00994 Probable molybdopterin binding domain RSC3_03274 PF00871 Acetokinase family RSC3_03275 PF00871 Acetokinase family RSC3_03276 PF02384 N-6 DNA Methylase RSC3_03277 PF08534 Redoxin RSC3_03278 PF09579 Sporulation protein YtfJ (Spore_YtfJ) RSC3_03279 PF11167 Protein of unknown function (DUF2953) RSC3_03280 PF06271 RDD family RSC3_03281 PF01343 Peptidase family S49 RSC3_03282 PF01513 ATP-NAD kinase RSC3_03284 PF01047 MarR family RSC3_03285 PF13193 AMP-binding enzyme C-terminal domain RSC3_03285 PF00501 AMP-binding enzyme RSC3_03286 PF00269 Small, acid-soluble spore proteins, alpha/beta type RSC3_03287 PF02568 Thiamine biosynthesis protein (ThiI) RSC3_03287 PF02926 THUMP domain RSC3_03288 PF00266 Aminotransferase class-V RSC3_03289 PF05525 Branched-chain amino acid transport protein RSC3_03290 PF06160 Septation ring formation regulator, EzrA RSC3_03291 PF02811 PHP domain RSC3_03292 PF00440 Bacterial regulatory proteins, tetR family RSC3_03293 PF13185 GAF domain RSC3_03294 PF00990 Diguanylate cyclase, GGDEF domain RSC3_03295 PF00163 Ribosomal protein S4/S9 N-terminal domain RSC3_03295 PF01479 S4 domain RSC3_03298 PF01479 S4 domain RSC3_03298 PF00579 tRNA synthetases class I (W and Y) RSC3_03299 PF00501 AMP-binding enzyme RSC3_03299 PF13193 AMP-binding enzyme C-terminal domain RSC3_03300 PF00583 Acetyltransferase (GNAT) family RSC3_03301 PF00571 CBS domain RSC3_03302 PF00850 Histone deacetylase domain RSC3_03303 PF13677 Membrane MotB of proton-channel complex MotA/MotB RSC3_03303 PF00691 OmpA family RSC3_03304 PF01618 MotA/TolQ/ExbB proton channel family RSC3_03305 PF00356 Bacterial regulatory proteins, lacI family RSC3_03306 PF01817 Chorismate mutase type II RSC3_03306 PF00793 DAHP synthetase I family RSC3_03308 PF11009 Protein of unknown function (DUF2847) RSC3_03309 PF12732 YtxH-like protein RSC3_03310 PF06103 Bacterial protein of unknown function (DUF948) RSC3_03311 PF01225 Mur ligase family, catalytic domain RSC3_03311 PF02875 Mur ligase family, glutamate ligase domain RSC3_03311 PF08245 Mur ligase middle domain RSC3_03313 PF17854 FtsK alpha domain RSC3_03313 PF09397 Ftsk gamma domain RSC3_03313 PF01580 FtsK/SpoIIIE family RSC3_03314 PF14794 Domain of unknown function (DUF4479) RSC3_03314 PF01588 Putative tRNA binding domain RSC3_03315 PF07285 Protein of unknown function (DUF1444) RSC3_03316 PF00085 Thioredoxin RSC3_03317 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ RSC3_03318 PF05343 M42 glutamyl aminopeptidase RSC3_03319 PF03413 Peptidase propeptide and YPEB domain RSC3_03320 PF03949 Malic enzyme, NAD binding domain RSC3_03320 PF00390 Malic enzyme, N-terminal domain RSC3_03321 PF00753 Metallo-beta-lactamase superfamily RSC3_03322 PF02390 Putative methyltransferase RSC3_03323 PF14165 YtzH-like protein RSC3_03324 PF01636 Phosphotransferase enzyme family RSC3_03325 PF17999 Pullulanase N1-terminal domain RSC3_03325 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RSC3_03325 PF00128 Alpha amylase, catalytic domain RSC3_03326 PF00781 Diacylglycerol kinase catalytic domain RSC3_03329 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_03330 PF10903 Protein of unknown function (DUF2691) RSC3_03331 PF01546 Peptidase family M20/M25/M40 RSC3_03332 PF00860 Permease family RSC3_03333 PF05975 Bacterial ABC transporter protein EcsB RSC3_03334 PF00005 ABC transporter RSC3_03335 PF08220 DeoR-like helix-turn-helix domain RSC3_03336 PF00849 RNA pseudouridylate synthase RSC3_03336 PF01479 S4 domain RSC3_03337 PF14667 Polysaccharide biosynthesis C-terminal domain RSC3_03337 PF01943 Polysaccharide biosynthesis protein RSC3_03339 PF02028 BCCT, betaine/carnitine/choline family transporter RSC3_03340 PF10957 Sporulation protein Cse60 RSC3_03341 PF00581 Rhodanese-like domain RSC3_03342 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_03345 PF04854 Protein of unknown function, DUF624 RSC3_03346 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_03346 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_03348 PF07470 Glycosyl Hydrolase Family 88 RSC3_03349 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03350 PF17853 GGDEF-like domain RSC3_03350 PF12833 Helix-turn-helix domain RSC3_03351 PF13416 Bacterial extracellular solute-binding protein RSC3_03352 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03353 PF01370 NAD dependent epimerase/dehydratase family RSC3_03354 PF01738 Dienelactone hydrolase family RSC3_03356 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_03356 PF03466 LysR substrate binding domain RSC3_03357 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_03358 PF08264 Anticodon-binding domain of tRNA RSC3_03358 PF00133 tRNA synthetases class I (I, L, M and V) RSC3_03358 PF13603 Leucyl-tRNA synthetase, Domain 2 RSC3_03358 PF09334 tRNA synthetases class I (M) RSC3_03359 PF14074 Protein of unknown function (DUF4257) RSC3_03360 PF07690 Major Facilitator Superfamily RSC3_03361 PF03180 NLPA lipoprotein RSC3_03362 PF04791 LMBR1-like membrane protein RSC3_03363 PF02687 FtsX-like permease family RSC3_03363 PF12704 MacB-like periplasmic core domain RSC3_03364 PF00005 ABC transporter RSC3_03366 PF00005 ABC transporter RSC3_03367 PF00392 Bacterial regulatory proteins, gntR family RSC3_03369 PF10732 Protein of unknown function (DUF2524) RSC3_03370 PF04055 Radical SAM superfamily RSC3_03370 PF16199 Radical_SAM C-terminal domain RSC3_03371 PF06962 Putative rRNA methylase RSC3_03372 PF00375 Sodium:dicarboxylate symporter family RSC3_03373 PF10776 Protein of unknown function (DUF2600) RSC3_03374 PF12146 Serine aminopeptidase, S33 RSC3_03375 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_03376 PF01569 PAP2 superfamily RSC3_03377 PF13439 Glycosyltransferase Family 4 RSC3_03377 PF00534 Glycosyl transferases group 1 RSC3_03378 PF13537 Glutamine amidotransferase domain RSC3_03378 PF00733 Asparagine synthase RSC3_03379 PF02773 S-adenosylmethionine synthetase, C-terminal domain RSC3_03379 PF02772 S-adenosylmethionine synthetase, central domain RSC3_03379 PF00438 S-adenosylmethionine synthetase, N-terminal domain RSC3_03380 PF01293 Phosphoenolpyruvate carboxykinase RSC3_03381 PF00375 Sodium:dicarboxylate symporter family RSC3_03383 PF10763 Protein of unknown function (DUF2584) RSC3_03384 PF00326 Prolyl oligopeptidase family RSC3_03386 PF00005 ABC transporter RSC3_03387 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03388 PF00293 NUDIX domain RSC3_03390 PF05105 Bacteriophage holin family RSC3_03391 PF00210 Ferritin-like domain RSC3_03393 PF13115 YtkA-like RSC3_03394 PF02664 S-Ribosylhomocysteinase (LuxS) RSC3_03395 PF01809 Putative membrane protein insertion efficiency factor RSC3_03396 PF00484 Carbonic anhydrase RSC3_03397 PF07683 Cobalamin synthesis protein cobW C-terminal domain RSC3_03397 PF02492 CobW/HypB/UreG, nucleotide-binding domain RSC3_03398 PF01297 Zinc-uptake complex component A periplasmic RSC3_03400 PF01197 Ribosomal protein L31 RSC3_03402 PF01654 Cytochrome bd terminal oxidase subunit I RSC3_03403 PF02322 Cytochrome bd terminal oxidase subunit II RSC3_03404 PF07561 Domain of Unknown Function (DUF1540) RSC3_03406 PF13378 Enolase C-terminal domain-like RSC3_03406 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_03407 PF13378 Enolase C-terminal domain-like RSC3_03407 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_03408 PF00501 AMP-binding enzyme RSC3_03408 PF13193 AMP-binding enzyme C-terminal domain RSC3_03409 PF00378 Enoyl-CoA hydratase/isomerase RSC3_03410 PF00561 alpha/beta hydrolase fold RSC3_03411 PF16582 Middle domain of thiamine pyrophosphate RSC3_03411 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RSC3_03411 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RSC3_03412 PF00425 chorismate binding enzyme RSC3_03413 PF01040 UbiA prenyltransferase family RSC3_03414 PF01258 Prokaryotic dksA/traR C4-type zinc finger RSC3_03415 PF01258 Prokaryotic dksA/traR C4-type zinc finger RSC3_03416 PF00343 Carbohydrate phosphorylase RSC3_03417 PF08323 Starch synthase catalytic domain RSC3_03417 PF00534 Glycosyl transferases group 1 RSC3_03418 PF00483 Nucleotidyl transferase RSC3_03419 PF00483 Nucleotidyl transferase RSC3_03420 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) RSC3_03420 PF00128 Alpha amylase, catalytic domain RSC3_03420 PF02806 Alpha amylase, C-terminal all-beta domain RSC3_03426 PF00392 Bacterial regulatory proteins, gntR family RSC3_03427 PF09515 Thiamine transporter protein (Thia_YuaJ) RSC3_03428 PF04203 Sortase domain RSC3_03431 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_03433 PF01470 Pyroglutamyl peptidase RSC3_03434 PF02254 TrkA-N domain RSC3_03434 PF02080 TrkA-C domain RSC3_03435 PF02386 Cation transport protein RSC3_03437 PF12867 DinB superfamily RSC3_03439 PF00465 Iron-containing alcohol dehydrogenase RSC3_03440 PF00171 Aldehyde dehydrogenase family RSC3_03443 PF04072 Leucine carboxyl methyltransferase RSC3_03444 PF00842 Alanine racemase, C-terminal domain RSC3_03444 PF01168 Alanine racemase, N-terminal domain RSC3_03445 PF00190 Cupin RSC3_03446 PF03747 ADP-ribosylglycohydrolase RSC3_03452 PF13332 Hemagglutinin repeat RSC3_03452 PF05860 haemagglutination activity domain RSC3_03452 PF04829 Pre-toxin domain with VENN motif RSC3_03457 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) RSC3_03461 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase RSC3_03463 PF00149 Calcineurin-like phosphoesterase RSC3_03464 PF02673 Bacitracin resistance protein BacA RSC3_03465 PF01594 AI-2E family transporter RSC3_03466 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_03466 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_03467 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_03467 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_03468 PF01965 DJ-1/PfpI family RSC3_03469 PF02743 Cache domain RSC3_03469 PF00672 HAMP domain RSC3_03469 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_03470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_03470 PF00672 HAMP domain RSC3_03470 PF02743 Cache domain RSC3_03471 PF02743 Cache domain RSC3_03471 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_03471 PF00672 HAMP domain RSC3_03474 PF03060 Nitronate monooxygenase RSC3_03475 PF01894 Uncharacterised protein family UPF0047 RSC3_03476 PF00128 Alpha amylase, catalytic domain RSC3_03476 PF16657 Maltogenic Amylase, C-terminal domain RSC3_03477 PF00128 Alpha amylase, catalytic domain RSC3_03477 PF16657 Maltogenic Amylase, C-terminal domain RSC3_03480 PF01670 Glycosyl hydrolase family 12 RSC3_03481 PF00571 CBS domain RSC3_03481 PF03471 Transporter associated domain RSC3_03481 PF01595 Cyclin M transmembrane N-terminal domain RSC3_03482 PF04298 Putative neutral zinc metallopeptidase RSC3_03484 PF11458 Membrane-integrating protein Mistic RSC3_03485 PF07885 Ion channel RSC3_03485 PF02254 TrkA-N domain RSC3_03486 PF08868 YugN-like family RSC3_03487 PF04239 Protein of unknown function (DUF421) RSC3_03488 PF03073 TspO/MBR family RSC3_03491 PF00342 Phosphoglucose isomerase RSC3_03493 PF00465 Iron-containing alcohol dehydrogenase RSC3_03494 PF04070 Domain of unknown function (DUF378) RSC3_03495 PF00575 S1 RNA binding domain RSC3_03496 PF00155 Aminotransferase class I and II RSC3_03497 PF01037 Lrp/AsnC ligand binding domain RSC3_03498 PF00561 alpha/beta hydrolase fold RSC3_03498 PF08386 TAP-like protein RSC3_03499 PF00561 alpha/beta hydrolase fold RSC3_03499 PF08386 TAP-like protein RSC3_03501 PF08958 Domain of unknown function (DUF1871) RSC3_03503 PF00155 Aminotransferase class I and II RSC3_03505 PF08810 Kinase associated protein B RSC3_03506 PF00929 Exonuclease RSC3_03507 PF07690 Major Facilitator Superfamily RSC3_03508 PF00912 Transglycosylase RSC3_03508 PF00905 Penicillin binding protein transpeptidase domain RSC3_03509 PF04134 Protein of unknown function, DUF393 RSC3_03510 PF17328 Family of unknown function (DUF5366) RSC3_03511 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain RSC3_03511 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03511 PF17203 Single cache domain 3 RSC3_03511 PF00989 PAS fold RSC3_03512 PF00072 Response regulator receiver domain RSC3_03513 PF01066 CDP-alcohol phosphatidyltransferase RSC3_03514 PF09335 SNARE associated Golgi protein RSC3_03515 PF02666 Phosphatidylserine decarboxylase RSC3_03516 PF03390 2-hydroxycarboxylate transporter family RSC3_03517 PF03390 2-hydroxycarboxylate transporter family RSC3_03519 PF13244 Domain of unknown function (DUF4040) RSC3_03519 PF00361 Proton-conducting membrane transporter RSC3_03519 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RSC3_03520 PF00361 Proton-conducting membrane transporter RSC3_03520 PF13244 Domain of unknown function (DUF4040) RSC3_03520 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus RSC3_03521 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter RSC3_03522 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L RSC3_03523 PF00361 Proton-conducting membrane transporter RSC3_03524 PF01899 Na+/H+ ion antiporter subunit RSC3_03525 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) RSC3_03526 PF03334 Na+/H+ antiporter subunit RSC3_03527 PF03061 Thioesterase superfamily RSC3_03528 PF00072 Response regulator receiver domain RSC3_03528 PF00196 Bacterial regulatory proteins, luxR family RSC3_03529 PF07730 Histidine kinase RSC3_03529 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03530 PF07730 Histidine kinase RSC3_03530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03532 PF00348 Polyprenyl synthetase RSC3_03533 PF08181 DegQ (SacQ) family RSC3_03534 PF00563 EAL domain RSC3_03534 PF08668 HDOD domain RSC3_03535 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RSC3_03535 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain RSC3_03535 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RSC3_03536 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family RSC3_03536 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain RSC3_03536 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain RSC3_03537 PF00857 Isochorismatase family RSC3_03538 PF07997 Protein of unknown function (DUF1694) RSC3_03539 PF14166 YueH-like protein RSC3_03541 PF01594 AI-2E family transporter RSC3_03543 PF01966 HD domain RSC3_03544 PF00106 short chain dehydrogenase RSC3_03546 PF17355 Family of unknown function (DUF5383) RSC3_03548 PF12538 DNA transporter RSC3_03548 PF01580 FtsK/SpoIIIE family RSC3_03549 PF10140 WXG100 protein secretion system (Wss), protein YukC RSC3_03550 PF10140 WXG100 protein secretion system (Wss), protein YukC RSC3_03551 PF08817 WXG100 protein secretion system (Wss), protein YukD RSC3_03552 PF06013 Proteins of 100 residues with WXG RSC3_03553 PF01235 Sodium:alanine symporter family RSC3_03554 PF06018 CodY GAF-like domain RSC3_03554 PF17853 GGDEF-like domain RSC3_03554 PF13556 PucR C-terminal helix-turn-helix domain RSC3_03555 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RSC3_03555 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RSC3_03557 PF00174 Oxidoreductase molybdopterin binding domain RSC3_03559 PF02632 BioY family RSC3_03560 PF03553 Na+/H+ antiporter family RSC3_03560 PF13726 Na+-H+ antiporter family RSC3_03561 PF00883 Cytosol aminopeptidase family, catalytic domain RSC3_03561 PF02789 Cytosol aminopeptidase family, N-terminal domain RSC3_03562 PF02681 Divergent PAP2 family RSC3_03564 PF06725 3D domain RSC3_03565 PF14068 Putative membrane protein RSC3_03566 PF17302 Family of unknown function (DUF5351) RSC3_03567 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_03568 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_03570 PF14169 Cold-inducible protein YdjO RSC3_03571 PF00583 Acetyltransferase (GNAT) family RSC3_03572 PF01521 Iron-sulphur cluster biosynthesis RSC3_03573 PF01678 Diaminopimelate epimerase RSC3_03574 PF07662 Na+ dependent nucleoside transporter C-terminus RSC3_03574 PF01773 Na+ dependent nucleoside transporter N-terminus RSC3_03575 PF07293 Protein of unknown function (DUF1450) RSC3_03576 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_03577 PF08818 Domain of unknown function (DU1801) RSC3_03580 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_03581 PF05870 Phenolic acid decarboxylase (PAD) RSC3_03583 PF07315 Protein of unknown function (DUF1462) RSC3_03584 PF01106 NifU-like domain RSC3_03585 PF07676 WD40-like Beta Propeller Repeat RSC3_03585 PF00326 Prolyl oligopeptidase family RSC3_03586 PF00326 Prolyl oligopeptidase family RSC3_03586 PF07676 WD40-like Beta Propeller Repeat RSC3_03587 PF08544 GHMP kinases C terminal RSC3_03587 PF00288 GHMP kinases N terminal domain RSC3_03588 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_03589 PF01842 ACT domain RSC3_03589 PF00742 Homoserine dehydrogenase RSC3_03589 PF03447 Homoserine dehydrogenase, NAD binding domain RSC3_03590 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RSC3_03590 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_03592 PF04608 Phosphatidylglycerophosphatase A RSC3_03593 PF13344 Haloacid dehalogenase-like hydrolase RSC3_03594 PF01934 Protein of unknown function DUF86 RSC3_03595 PF06265 Protein of unknown function (DUF1027) RSC3_03596 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) RSC3_03597 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family RSC3_03597 PF04055 Radical SAM superfamily RSC3_03598 PF01551 Peptidase family M23 RSC3_03600 PF00209 Sodium:neurotransmitter symporter family RSC3_03601 PF09560 Sporulation protein YunB (Spo_YunB) RSC3_03602 PF08827 Domain of unknown function (DUF1805) RSC3_03603 PF02872 5'-nucleotidase, C-terminal domain RSC3_03604 PF01925 Sulfite exporter TauE/SafE RSC3_03605 PF01904 Protein of unknown function DUF72 RSC3_03607 PF13977 BetI-type transcriptional repressor, C-terminal RSC3_03607 PF00440 Bacterial regulatory proteins, tetR family RSC3_03609 PF00266 Aminotransferase class-V RSC3_03610 PF07905 Purine catabolism regulatory protein-like family RSC3_03610 PF13556 PucR C-terminal helix-turn-helix domain RSC3_03610 PF17853 GGDEF-like domain RSC3_03611 PF07690 Major Facilitator Superfamily RSC3_03612 PF03606 C4-dicarboxylate anaerobic carrier RSC3_03614 PF02885 Glycosyl transferase family, helical bundle domain RSC3_03614 PF00591 Glycosyl transferase family, a/b domain RSC3_03615 PF04231 Endonuclease I RSC3_03617 PF01266 FAD dependent oxidoreductase RSC3_03622 PF18801 response regulator aspartate phosphatase H, N terminal RSC3_03624 PF01458 Uncharacterized protein family (UPF0051) RSC3_03625 PF01592 NifU-like N terminal domain RSC3_03626 PF00266 Aminotransferase class-V RSC3_03627 PF00266 Aminotransferase class-V RSC3_03628 PF01458 Uncharacterized protein family (UPF0051) RSC3_03629 PF00005 ABC transporter RSC3_03630 PF01545 Cation efflux family RSC3_03630 PF16916 Dimerisation domain of Zinc Transporter RSC3_03631 PF02627 Carboxymuconolactone decarboxylase family RSC3_03632 PF03180 NLPA lipoprotein RSC3_03633 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03634 PF00005 ABC transporter RSC3_03634 PF09383 NIL domain RSC3_03635 PF02036 SCP-2 sterol transfer family RSC3_03636 PF00085 Thioredoxin RSC3_03637 PF01751 Toprim domain RSC3_03638 PF10830 Protein of unknown function (DUF2553) RSC3_03639 PF01597 Glycine cleavage H-protein RSC3_03640 PF01597 Glycine cleavage H-protein RSC3_03641 PF03960 ArsC family RSC3_03642 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_03642 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RSC3_03642 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_03643 PF02803 Thiolase, C-terminal domain RSC3_03643 PF00108 Thiolase, N-terminal domain RSC3_03644 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RSC3_03644 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RSC3_03644 PF00378 Enoyl-CoA hydratase/isomerase RSC3_03645 PF14115 YuzL-like protein RSC3_03647 PF07875 Coat F domain RSC3_03648 PF10835 Protein of unknown function (DUF2573) RSC3_03650 PF00005 ABC transporter RSC3_03651 PF01032 FecCD transport family RSC3_03652 PF01032 FecCD transport family RSC3_03653 PF01032 FecCD transport family RSC3_03654 PF01497 Periplasmic binding protein RSC3_03655 PF14039 YusW-like protein RSC3_03658 PF00768 D-alanyl-D-alanine carboxypeptidase RSC3_03658 PF07943 Penicillin-binding protein 5, C-terminal domain RSC3_03659 PF00106 short chain dehydrogenase RSC3_03660 PF00210 Ferritin-like domain RSC3_03661 PF13180 PDZ domain RSC3_03662 PF00072 Response regulator receiver domain RSC3_03662 PF00486 Transcriptional regulatory protein, C terminal RSC3_03663 PF00512 His Kinase A (phospho-acceptor) domain RSC3_03663 PF00672 HAMP domain RSC3_03663 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03665 PF00440 Bacterial regulatory proteins, tetR family RSC3_03666 PF10415 Fumarase C C-terminus RSC3_03666 PF00206 Lyase RSC3_03667 PF13113 Protein of unknown function (DUF3970) RSC3_03668 PF03323 Bacillus/Clostridium GerA spore germination protein RSC3_03669 PF03845 Spore germination protein RSC3_03670 PF05504 Spore germination B3/ GerAC like, C-terminal RSC3_03672 PF00072 Response regulator receiver domain RSC3_03672 PF00196 Bacterial regulatory proteins, luxR family RSC3_03673 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03673 PF07730 Histidine kinase RSC3_03673 PF00672 HAMP domain RSC3_03674 PF09922 Cell wall-active antibiotics response 4TMS YvqF RSC3_03675 PF13349 Putative adhesin RSC3_03676 PF04012 PspA/IM30 family RSC3_03677 PF04012 PspA/IM30 family RSC3_03679 PF01095 Pectinesterase RSC3_03680 PF01923 Cobalamin adenosyltransferase RSC3_03682 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RSC3_03683 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RSC3_03686 PF00465 Iron-containing alcohol dehydrogenase RSC3_03687 PF00701 Dihydrodipicolinate synthetase family RSC3_03688 PF00005 ABC transporter RSC3_03689 PF01032 FecCD transport family RSC3_03690 PF01497 Periplasmic binding protein RSC3_03691 PF07729 FCD domain RSC3_03691 PF00392 Bacterial regulatory proteins, gntR family RSC3_03693 PF00106 short chain dehydrogenase RSC3_03694 PF03475 3-alpha domain RSC3_03694 PF03473 MOSC domain RSC3_03695 PF03473 MOSC domain RSC3_03695 PF03475 3-alpha domain RSC3_03696 PF03466 LysR substrate binding domain RSC3_03696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_03697 PF00295 Glycosyl hydrolases family 28 RSC3_03698 PF08666 SAF domain RSC3_03698 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus RSC3_03699 PF01232 Mannitol dehydrogenase Rossmann domain RSC3_03699 PF08125 Mannitol dehydrogenase C-terminal domain RSC3_03700 PF00356 Bacterial regulatory proteins, lacI family RSC3_03702 PF02614 Glucuronate isomerase RSC3_03703 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03703 PF00512 His Kinase A (phospho-acceptor) domain RSC3_03704 PF00072 Response regulator receiver domain RSC3_03704 PF00486 Transcriptional regulatory protein, C terminal RSC3_03705 PF00005 ABC transporter RSC3_03706 PF01032 FecCD transport family RSC3_03707 PF01032 FecCD transport family RSC3_03708 PF13520 Amino acid permease RSC3_03710 PF09575 Small spore protein J (Spore_SspJ) RSC3_03711 PF04307 LexA-binding, inner membrane-associated putative hydrolase RSC3_03712 PF00884 Sulfatase RSC3_03713 PF07690 Major Facilitator Superfamily RSC3_03715 PF00248 Aldo/keto reductase family RSC3_03716 PF00480 ROK family RSC3_03718 PF00266 Aminotransferase class-V RSC3_03720 PF12697 Alpha/beta hydrolase family RSC3_03721 PF13538 UvrD-like helicase C-terminal domain RSC3_03722 PF03458 UPF0126 domain RSC3_03723 PF04229 GrpB protein RSC3_03723 PF13673 Acetyltransferase (GNAT) domain RSC3_03725 PF00583 Acetyltransferase (GNAT) family RSC3_03725 PF13673 Acetyltransferase (GNAT) domain RSC3_03726 PF02600 Disulfide bond formation protein DsbB RSC3_03727 PF13462 Thioredoxin RSC3_03728 PF00403 Heavy-metal-associated domain RSC3_03729 PF13416 Bacterial extracellular solute-binding protein RSC3_03730 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03731 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03732 PF13802 Galactose mutarotase-like RSC3_03732 PF01055 Glycosyl hydrolases family 31 RSC3_03733 PF13802 Galactose mutarotase-like RSC3_03733 PF01055 Glycosyl hydrolases family 31 RSC3_03734 PF01915 Glycosyl hydrolase family 3 C-terminal domain RSC3_03734 PF14310 Fibronectin type III-like domain RSC3_03734 PF00933 Glycosyl hydrolase family 3 N terminal domain RSC3_03734 PF07691 PA14 domain RSC3_03736 PF00005 ABC transporter RSC3_03737 PF00950 ABC 3 transport family RSC3_03738 PF01297 Zinc-uptake complex component A periplasmic RSC3_03739 PF01380 SIS domain RSC3_03739 PF01418 Helix-turn-helix domain, rpiR family RSC3_03741 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_03741 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_03742 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_03743 PF01116 Fructose-bisphosphate aldolase class-II RSC3_03745 PF00403 Heavy-metal-associated domain RSC3_03746 PF00403 Heavy-metal-associated domain RSC3_03747 PF02583 Metal-sensitive transcriptional repressor RSC3_03748 PF01965 DJ-1/PfpI family RSC3_03749 PF08220 DeoR-like helix-turn-helix domain RSC3_03749 PF00455 DeoR C terminal sensor domain RSC3_03750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RSC3_03750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RSC3_03751 PF01261 Xylose isomerase-like TIM barrel RSC3_03753 PF00596 Class II Aldolase and Adducin N-terminal domain RSC3_03754 PF07690 Major Facilitator Superfamily RSC3_03755 PF07690 Major Facilitator Superfamily RSC3_03756 PF07690 Major Facilitator Superfamily RSC3_03757 PF16715 Cyclodipeptide synthase RSC3_03758 PF00067 Cytochrome P450 RSC3_03760 PF01047 MarR family RSC3_03761 PF01425 Amidase RSC3_03762 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_03762 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_03763 PF02525 Flavodoxin-like fold RSC3_03764 PF12368 Rhodanase C-terminal RSC3_03764 PF17773 UPF0176 acylphosphatase like domain RSC3_03764 PF00581 Rhodanese-like domain RSC3_03766 PF04545 Sigma-70, region 4 RSC3_03767 PF12841 YvrJ protein family RSC3_03768 PF00190 Cupin RSC3_03769 PF14184 Regulatory protein YrvL RSC3_03772 PF17189 Glycosyl hydrolase family 30 beta sandwich domain RSC3_03773 PF03422 Carbohydrate binding module (family 6) RSC3_03773 PF04616 Glycosyl hydrolases family 43 RSC3_03775 PF14317 YcxB-like protein RSC3_03777 PF14449 Pre-toxin TG RSC3_03777 PF04740 LXG domain of WXG superfamily RSC3_03777 PF14431 YwqJ-like deaminase RSC3_03780 PF01510 N-acetylmuramoyl-L-alanine amidase RSC3_03780 PF01471 Putative peptidoglycan binding domain RSC3_03781 PF01668 SmpB protein RSC3_03782 PF17876 Cold shock domain RSC3_03782 PF08206 Ribonuclease B OB domain RSC3_03782 PF00773 RNB domain RSC3_03782 PF00575 S1 RNA binding domain RSC3_03783 PF12146 Serine aminopeptidase, S33 RSC3_03784 PF03840 Preprotein translocase SecG subunit RSC3_03785 PF18277 AbrB C-terminal domain RSC3_03785 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RSC3_03786 PF01381 Helix-turn-helix RSC3_03789 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system RSC3_03791 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_03792 PF00005 ABC transporter RSC3_03792 PF00571 CBS domain RSC3_03793 PF12802 MarR family RSC3_03794 PF01914 MarC family integral membrane protein RSC3_03796 PF13240 zinc-ribbon domain RSC3_03797 PF01497 Periplasmic binding protein RSC3_03798 PF02743 Cache domain RSC3_03798 PF00672 HAMP domain RSC3_03798 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_03802 PF01965 DJ-1/PfpI family RSC3_03803 PF03952 Enolase, N-terminal domain RSC3_03803 PF00113 Enolase, C-terminal TIM barrel domain RSC3_03804 PF06415 BPG-independent PGAM N-terminus (iPGM_N) RSC3_03804 PF01676 Metalloenzyme superfamily RSC3_03805 PF00121 Triosephosphate isomerase RSC3_03806 PF00162 Phosphoglycerate kinase RSC3_03807 PF00162 Phosphoglycerate kinase RSC3_03808 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain RSC3_03808 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain RSC3_03809 PF04198 Putative sugar-binding domain RSC3_03810 PF00296 Luciferase-like monooxygenase RSC3_03811 PF00324 Amino acid permease RSC3_03813 PF00005 ABC transporter RSC3_03815 PF02589 LUD domain RSC3_03816 PF11870 Domain of unknown function (DUF3390) RSC3_03816 PF02589 LUD domain RSC3_03816 PF13183 4Fe-4S dicluster domain RSC3_03817 PF02754 Cysteine-rich domain RSC3_03818 PF02754 Cysteine-rich domain RSC3_03819 PF07729 FCD domain RSC3_03819 PF00392 Bacterial regulatory proteins, gntR family RSC3_03820 PF02652 L-lactate permease RSC3_03821 PF04552 Sigma-54, DNA binding domain RSC3_03821 PF00309 Sigma-54 factor, Activator interacting domain (AID) RSC3_03821 PF04963 Sigma-54 factor, core binding domain RSC3_03822 PF09628 YvfG protein RSC3_03823 PF04230 Polysaccharide pyruvyl transferase RSC3_03824 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RSC3_03825 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_03825 PF17836 PglD N-terminal domain RSC3_03826 PF02397 Bacterial sugar transferase RSC3_03827 PF01943 Polysaccharide biosynthesis protein RSC3_03827 PF14667 Polysaccharide biosynthesis C-terminal domain RSC3_03828 PF00535 Glycosyl transferase family 2 RSC3_03829 PF04230 Polysaccharide pyruvyl transferase RSC3_03830 PF00535 Glycosyl transferase family 2 RSC3_03832 PF13439 Glycosyltransferase Family 4 RSC3_03832 PF00534 Glycosyl transferases group 1 RSC3_03833 PF00535 Glycosyl transferase family 2 RSC3_03834 PF13439 Glycosyltransferase Family 4 RSC3_03834 PF00534 Glycosyl transferases group 1 RSC3_03835 PF02719 Polysaccharide biosynthesis protein RSC3_03837 PF13614 AAA domain RSC3_03838 PF02706 Chain length determinant protein RSC3_03839 PF01381 Helix-turn-helix RSC3_03839 PF08671 Anti-repressor SinI RSC3_03842 PF02525 Flavodoxin-like fold RSC3_03843 PF07690 Major Facilitator Superfamily RSC3_03844 PF07690 Major Facilitator Superfamily RSC3_03845 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_03845 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RSC3_03845 PF01842 ACT domain RSC3_03846 PF04166 Pyridoxal phosphate biosynthetic protein PdxA RSC3_03847 PF17042 Nucleotide-binding C-terminal domain RSC3_03847 PF07005 Sugar-binding N-terminal domain RSC3_03848 PF00465 Iron-containing alcohol dehydrogenase RSC3_03849 PF00701 Dihydrodipicolinate synthetase family RSC3_03850 PF00072 Response regulator receiver domain RSC3_03850 PF00158 Sigma-54 interaction domain RSC3_03850 PF02954 Bacterial regulatory protein, Fis family RSC3_03851 PF01638 HxlR-like helix-turn-helix RSC3_03852 PF00724 NADH:flavin oxidoreductase / NADH oxidase family RSC3_03853 PF02435 Levansucrase/Invertase RSC3_03854 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_03854 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_03856 PF00574 Clp protease RSC3_03857 PF03641 Possible lysine decarboxylase RSC3_03858 PF03819 MazG nucleotide pyrophosphohydrolase domain RSC3_03859 PF01966 HD domain RSC3_03860 PF01740 STAS domain RSC3_03860 PF00916 Sulfate permease family RSC3_03861 PF00484 Carbonic anhydrase RSC3_03862 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RSC3_03862 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_03863 PF01613 Flavin reductase like domain RSC3_03866 PF00545 ribonuclease RSC3_03867 PF01337 Barstar (barnase inhibitor) RSC3_03868 PF00797 N-acetyltransferase RSC3_03869 PF00381 PTS HPr component phosphorylation site RSC3_03870 PF14527 WhiA LAGLIDADG-like domain RSC3_03870 PF02650 WhiA C-terminal HTH domain RSC3_03870 PF10298 WhiA N-terminal LAGLIDADG-like domain RSC3_03871 PF01933 Uncharacterised protein family UPF0052 RSC3_03872 PF03668 P-loop ATPase protein family RSC3_03873 PF00293 NUDIX domain RSC3_03874 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_03877 PF01502 Phosphoribosyl-AMP cyclohydrolase RSC3_03877 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase RSC3_03878 PF00977 Histidine biosynthesis protein RSC3_03879 PF00977 Histidine biosynthesis protein RSC3_03880 PF00117 Glutamine amidotransferase class-I RSC3_03881 PF00475 Imidazoleglycerol-phosphate dehydratase RSC3_03882 PF00815 Histidinol dehydrogenase RSC3_03883 PF01634 ATP phosphoribosyltransferase RSC3_03884 PF13393 Histidyl-tRNA synthetase RSC3_03885 PF13529 Peptidase_C39 like family RSC3_03886 PF03211 Pectate lyase RSC3_03887 PF14602 Hexapeptide repeat of succinyl-transferase RSC3_03888 PF13419 Haloacid dehalogenase-like hydrolase RSC3_03889 PF07670 Nucleoside recognition RSC3_03890 PF01790 Prolipoprotein diacylglyceryl transferase RSC3_03891 PF02603 HPr Serine kinase N terminus RSC3_03891 PF07475 HPr Serine kinase C-terminal domain RSC3_03892 PF07475 HPr Serine kinase C-terminal domain RSC3_03892 PF02603 HPr Serine kinase N terminus RSC3_03893 PF01047 MarR family RSC3_03894 PF07690 Major Facilitator Superfamily RSC3_03895 PF00149 Calcineurin-like phosphoesterase RSC3_03896 PF00149 Calcineurin-like phosphoesterase RSC3_03897 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV RSC3_03898 PF04024 PspC domain RSC3_03899 PF13349 Putative adhesin RSC3_03902 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_03903 PF00005 ABC transporter RSC3_03903 PF17755 UvrA DNA-binding domain RSC3_03903 PF17760 UvrA interaction domain RSC3_03904 PF02151 UvrB/uvrC motif RSC3_03904 PF00271 Helicase conserved C-terminal domain RSC3_03904 PF04851 Type III restriction enzyme, res subunit RSC3_03904 PF17757 UvrB interaction domain RSC3_03904 PF12344 Ultra-violet resistance protein B RSC3_03905 PF00271 Helicase conserved C-terminal domain RSC3_03905 PF04851 Type III restriction enzyme, res subunit RSC3_03905 PF02151 UvrB/uvrC motif RSC3_03905 PF12344 Ultra-violet resistance protein B RSC3_03905 PF17757 UvrB interaction domain RSC3_03906 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) RSC3_03908 PF17820 PDZ domain RSC3_03909 PF17423 Swarming motility protein RSC3_03910 PF01471 Putative peptidoglycan binding domain RSC3_03910 PF17820 PDZ domain RSC3_03910 PF03572 Peptidase family S41 RSC3_03911 PF00180 Isocitrate/isopropylmalate dehydrogenase RSC3_03912 PF00877 NlpC/P60 family RSC3_03913 PF18075 FtsX extracellular domain RSC3_03913 PF02687 FtsX-like permease family RSC3_03914 PF00005 ABC transporter RSC3_03918 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_03918 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_03919 PF00472 RF-1 domain RSC3_03919 PF03462 PCRF domain RSC3_03920 PF07516 SecA Wing and Scaffold domain RSC3_03920 PF01043 SecA preprotein cross-linking domain RSC3_03920 PF07517 SecA DEAD-like domain RSC3_03920 PF02810 SEC-C motif RSC3_03921 PF07517 SecA DEAD-like domain RSC3_03921 PF01043 SecA preprotein cross-linking domain RSC3_03921 PF07516 SecA Wing and Scaffold domain RSC3_03921 PF02810 SEC-C motif RSC3_03922 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus RSC3_03922 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein RSC3_03925 PF02561 Flagellar protein FliS RSC3_03926 PF02465 Flagellar hook-associated protein 2 N-terminus RSC3_03926 PF07196 Flagellin hook IN motif RSC3_03926 PF07195 Flagellar hook-associated protein 2 C-terminus RSC3_03927 PF07195 Flagellar hook-associated protein 2 C-terminus RSC3_03927 PF02465 Flagellar hook-associated protein 2 N-terminus RSC3_03927 PF07196 Flagellin hook IN motif RSC3_03928 PF03646 FlaG protein RSC3_03930 PF00700 Bacterial flagellin C-terminal helical region RSC3_03930 PF00669 Bacterial flagellin N-terminal helical region RSC3_03931 PF02599 Global regulator protein family RSC3_03932 PF02623 FliW protein RSC3_03934 PF00700 Bacterial flagellin C-terminal helical region RSC3_03934 PF00669 Bacterial flagellin N-terminal helical region RSC3_03935 PF00460 Flagella basal body rod protein RSC3_03935 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RSC3_03936 PF05130 FlgN protein RSC3_03937 PF04316 Anti-sigma-28 factor, FlgM RSC3_03940 PF10719 Late competence development protein ComFB RSC3_03941 PF00271 Helicase conserved C-terminal domain RSC3_03941 PF04851 Type III restriction enzyme, res subunit RSC3_03942 PF02645 Uncharacterised protein, DegV family COG1307 RSC3_03943 PF00196 Bacterial regulatory proteins, luxR family RSC3_03943 PF00072 Response regulator receiver domain RSC3_03944 PF07730 Histidine kinase RSC3_03944 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_03944 PF05384 Sensor protein DegS RSC3_03945 PF09186 Domain of unknown function (DUF1949) RSC3_03945 PF01205 Uncharacterized protein family UPF0029 RSC3_03946 PF09186 Domain of unknown function (DUF1949) RSC3_03946 PF01205 Uncharacterized protein family UPF0029 RSC3_03947 PF03816 Cell envelope-related transcriptional attenuator domain RSC3_03949 PF00953 Glycosyl transferase family 4 RSC3_03951 PF00535 Glycosyl transferase family 2 RSC3_03952 PF02706 Chain length determinant protein RSC3_03953 PF04932 O-Antigen ligase RSC3_03954 PF04932 O-Antigen ligase RSC3_03955 PF16363 GDP-mannose 4,6 dehydratase RSC3_03956 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain RSC3_03956 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain RSC3_03956 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain RSC3_03957 PF13439 Glycosyltransferase Family 4 RSC3_03957 PF00534 Glycosyl transferases group 1 RSC3_03958 PF01943 Polysaccharide biosynthesis protein RSC3_03958 PF14667 Polysaccharide biosynthesis C-terminal domain RSC3_03959 PF02397 Bacterial sugar transferase RSC3_03960 PF01520 N-acetylmuramoyl-L-alanine amidase RSC3_03960 PF04122 Putative cell wall binding repeat 2 RSC3_03961 PF08486 Stage II sporulation protein RSC3_03961 PF04122 Putative cell wall binding repeat 2 RSC3_03963 PF03816 Cell envelope-related transcriptional attenuator domain RSC3_03964 PF02350 UDP-N-acetylglucosamine 2-epimerase RSC3_03965 PF00483 Nucleotidyl transferase RSC3_03966 PF00535 Glycosyl transferase family 2 RSC3_03966 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RSC3_03967 PF00535 Glycosyl transferase family 2 RSC3_03969 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RSC3_03970 PF00483 Nucleotidyl transferase RSC3_03971 PF00005 ABC transporter RSC3_03972 PF01061 ABC-2 type transporter RSC3_03974 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RSC3_03975 PF01467 Cytidylyltransferase-like RSC3_03976 PF03808 Glycosyl transferase WecB/TagA/CpsF family RSC3_03977 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase RSC3_03978 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RSC3_03978 PF08239 Bacterial SH3 domain RSC3_03978 PF05036 Sporulation related domain RSC3_03979 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase RSC3_03979 PF08239 Bacterial SH3 domain RSC3_03979 PF05036 Sporulation related domain RSC3_03980 PF01238 Phosphomannose isomerase type I RSC3_03981 PF01238 Phosphomannose isomerase type I RSC3_03982 PF04055 Radical SAM superfamily RSC3_03983 PF03477 ATP cone domain RSC3_03983 PF13597 Anaerobic ribonucleoside-triphosphate reductase RSC3_03985 PF03812 2-keto-3-deoxygluconate permease RSC3_03987 PF01081 KDPG and KHG aldolase RSC3_03988 PF00294 pfkB family carbohydrate kinase RSC3_03989 PF00356 Bacterial regulatory proteins, lacI family RSC3_03990 PF04962 KduI/IolB family RSC3_03992 PF13823 Alcohol dehydrogenase GroES-associated RSC3_03992 PF00107 Zinc-binding dehydrogenase RSC3_03992 PF08240 Alcohol dehydrogenase GroES-like domain RSC3_03994 PF00083 Sugar (and other) transporter RSC3_03995 PF03816 Cell envelope-related transcriptional attenuator domain RSC3_03997 PF00877 NlpC/P60 family RSC3_03999 PF09587 Bacterial capsule synthesis protein PGA_cap RSC3_04000 PF14102 Capsule biosynthesis CapC RSC3_04001 PF08245 Mur ligase middle domain RSC3_04002 PF00356 Bacterial regulatory proteins, lacI family RSC3_04003 PF00294 pfkB family carbohydrate kinase RSC3_04004 PF05025 RbsD / FucU transport protein family RSC3_04005 PF00005 ABC transporter RSC3_04006 PF02653 Branched-chain amino acid transport system / permease component RSC3_04007 PF13407 Periplasmic binding protein domain RSC3_04008 PF03466 LysR substrate binding domain RSC3_04008 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_04009 PF08241 Methyltransferase domain RSC3_04010 PF03306 Alpha-acetolactate decarboxylase RSC3_04011 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RSC3_04011 PF00205 Thiamine pyrophosphate enzyme, central domain RSC3_04011 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RSC3_04012 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_04012 PF03466 LysR substrate binding domain RSC3_04015 PF01037 Lrp/AsnC ligand binding domain RSC3_04015 PF13404 AsnC-type helix-turn-helix domain RSC3_04016 PF02417 Chromate transporter RSC3_04017 PF02417 Chromate transporter RSC3_04019 PF02706 Chain length determinant protein RSC3_04019 PF13807 G-rich domain on putative tyrosine kinase RSC3_04021 PF04434 SWIM zinc finger RSC3_04022 PF04434 SWIM zinc finger RSC3_04023 PF00271 Helicase conserved C-terminal domain RSC3_04023 PF00176 SNF2 family N-terminal domain RSC3_04023 PF12419 SNF2 Helicase protein RSC3_04024 PF12419 SNF2 Helicase protein RSC3_04024 PF00271 Helicase conserved C-terminal domain RSC3_04024 PF00176 SNF2 family N-terminal domain RSC3_04025 PF09234 Domain of unknown function (DUF1963) RSC3_04027 PF01434 Peptidase family M41 RSC3_04027 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_04027 PF17862 AAA+ lid domain RSC3_04027 PF06480 FtsH Extracellular RSC3_04031 PF00455 DeoR C terminal sensor domain RSC3_04031 PF08220 DeoR-like helix-turn-helix domain RSC3_04032 PF00923 Transaldolase/Fructose-6-phosphate aldolase RSC3_04033 PF00106 short chain dehydrogenase RSC3_04034 PF03829 PTS system glucitol/sorbitol-specific IIA component RSC3_04035 PF07663 Sorbitol phosphotransferase enzyme II C-terminus RSC3_04035 PF03612 Sorbitol phosphotransferase enzyme II N-terminus RSC3_04036 PF03608 PTS system enzyme II sorbitol-specific factor RSC3_04038 PF13936 Helix-turn-helix domain RSC3_04038 PF04198 Putative sugar-binding domain RSC3_04039 PF00436 Single-strand binding protein family RSC3_04041 PF14183 YwpF-like protein RSC3_04042 PF01741 Large-conductance mechanosensitive channel, MscL RSC3_04043 PF07977 FabA-like domain RSC3_04044 PF00460 Flagella basal body rod protein RSC3_04044 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RSC3_04045 PF00460 Flagella basal body rod protein RSC3_04045 PF06429 Flagellar basal body rod FlgEFG protein C-terminal RSC3_04047 PF12116 Stage III sporulation protein D RSC3_04048 PF01047 MarR family RSC3_04049 PF07690 Major Facilitator Superfamily RSC3_04050 PF01569 PAP2 superfamily RSC3_04051 PF01368 DHH family RSC3_04051 PF02833 DHHA2 domain RSC3_04052 PF05067 Manganese containing catalase RSC3_04053 PF09844 Uncharacterized conserved protein (COG2071) RSC3_04056 PF00571 CBS domain RSC3_04057 PF01544 CorA-like Mg2+ transporter protein RSC3_04058 PF00571 CBS domain RSC3_04058 PF03471 Transporter associated domain RSC3_04058 PF01595 Cyclin M transmembrane N-terminal domain RSC3_04059 PF00909 Ammonium Transporter Family RSC3_04060 PF00909 Ammonium Transporter Family RSC3_04061 PF00543 Nitrogen regulatory protein P-II RSC3_04062 PF00574 Clp protease RSC3_04063 PF04542 Sigma-70 region 2 RSC3_04063 PF08281 Sigma-70, region 4 RSC3_04063 PF12680 SnoaL-like domain RSC3_04064 PF01551 Peptidase family M23 RSC3_04065 PF00583 Acetyltransferase (GNAT) family RSC3_04066 PF17370 Family of unknown function (DUF5392) RSC3_04067 PF13091 PLD-like domain RSC3_04067 PF13396 Phospholipase_D-nuclease N-terminal RSC3_04068 PF07690 Major Facilitator Superfamily RSC3_04069 PF03621 MbtH-like protein RSC3_04070 PF00668 Condensation domain RSC3_04070 PF00501 AMP-binding enzyme RSC3_04070 PF13193 AMP-binding enzyme C-terminal domain RSC3_04070 PF00550 Phosphopantetheine attachment site RSC3_04070 PF00975 Thioesterase domain RSC3_04071 PF00857 Isochorismatase family RSC3_04071 PF00550 Phosphopantetheine attachment site RSC3_04072 PF00501 AMP-binding enzyme RSC3_04072 PF13193 AMP-binding enzyme C-terminal domain RSC3_04073 PF00425 chorismate binding enzyme RSC3_04074 PF00106 short chain dehydrogenase RSC3_04075 PF00756 Putative esterase RSC3_04076 PF01032 FecCD transport family RSC3_04077 PF01032 FecCD transport family RSC3_04078 PF01497 Periplasmic binding protein RSC3_04079 PF12833 Helix-turn-helix domain RSC3_04079 PF01497 Periplasmic binding protein RSC3_04080 PF17319 Family of unknown function (DUF5362) RSC3_04081 PF13460 NAD(P)H-binding RSC3_04082 PF02082 Transcriptional regulator RSC3_04085 PF06463 Molybdenum Cofactor Synthesis C RSC3_04085 PF04055 Radical SAM superfamily RSC3_04086 PF02634 FdhD/NarQ family RSC3_04088 PF07690 Major Facilitator Superfamily RSC3_04090 PF12838 4Fe-4S dicluster domain RSC3_04090 PF04879 Molybdopterin oxidoreductase Fe4S4 domain RSC3_04090 PF00384 Molybdopterin oxidoreductase RSC3_04090 PF01568 Molydopterin dinucleotide binding domain RSC3_04090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region RSC3_04091 PF00092 von Willebrand factor type A domain RSC3_04092 PF00092 von Willebrand factor type A domain RSC3_04093 PF08486 Stage II sporulation protein RSC3_04094 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RSC3_04095 PF08680 TATA-box binding RSC3_04096 PF06612 Protein of unknown function (DUF1146) RSC3_04097 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain RSC3_04097 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain RSC3_04098 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RSC3_04098 PF02874 ATP synthase alpha/beta family, beta-barrel domain RSC3_04099 PF00231 ATP synthase RSC3_04100 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RSC3_04100 PF00306 ATP synthase alpha/beta chain, C terminal domain RSC3_04100 PF02874 ATP synthase alpha/beta family, beta-barrel domain RSC3_04101 PF00213 ATP synthase delta (OSCP) subunit RSC3_04102 PF00430 ATP synthase B/B' CF(0) RSC3_04103 PF00137 ATP synthase subunit C RSC3_04104 PF00119 ATP synthase A chain RSC3_04105 PF03899 ATP synthase I chain RSC3_04107 PF00464 Serine hydroxymethyltransferase RSC3_04108 PF04260 Protein of unknown function (DUF436) RSC3_04109 PF04260 Protein of unknown function (DUF436) RSC3_04110 PF02502 Ribose/Galactose Isomerase RSC3_04111 PF01451 Low molecular weight phosphotyrosine protein phosphatase RSC3_04112 PF02659 Putative manganese efflux pump RSC3_04113 PF01300 Telomere recombination RSC3_04113 PF03481 Putative GTP-binding controlling metal-binding RSC3_04115 PF09551 Stage II sporulation protein R (spore_II_R) RSC3_04116 PF07690 Major Facilitator Superfamily RSC3_04117 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_04117 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_04118 PF05116 Sucrose-6F-phosphate phosphohydrolase RSC3_04119 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RSC3_04120 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family RSC3_04121 PF00356 Bacterial regulatory proteins, lacI family RSC3_04122 PF05175 Methyltransferase small domain RSC3_04122 PF17827 PrmC N-terminal domain RSC3_04123 PF00472 RF-1 domain RSC3_04123 PF03462 PCRF domain RSC3_04124 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_04125 PF13411 MerR HTH family regulatory protein RSC3_04126 PF13411 MerR HTH family regulatory protein RSC3_04127 PF03547 Membrane transport protein RSC3_04128 PF00390 Malic enzyme, N-terminal domain RSC3_04128 PF03949 Malic enzyme, NAD binding domain RSC3_04129 PF00265 Thymidine kinase RSC3_04130 PF01197 Ribosomal protein L31 RSC3_04131 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain RSC3_04131 PF07498 Rho termination factor, N-terminal domain RSC3_04131 PF07497 Rho termination factor, RNA-binding domain RSC3_04132 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded RSC3_04133 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) RSC3_04134 PF00923 Transaldolase/Fructose-6-phosphate aldolase RSC3_04135 PF01116 Fructose-bisphosphate aldolase class-II RSC3_04136 PF00072 Response regulator receiver domain RSC3_04137 PF10740 Domain of unknown function (DUF2529) RSC3_04138 PF06418 CTP synthase N-terminus RSC3_04138 PF00117 Glutamine amidotransferase class-I RSC3_04139 PF05066 HB1, ASXL, restriction endonuclease HTH domain RSC3_04140 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RSC3_04140 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_04140 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_04141 PF00441 Acyl-CoA dehydrogenase, C-terminal domain RSC3_04141 PF02770 Acyl-CoA dehydrogenase, middle domain RSC3_04141 PF02771 Acyl-CoA dehydrogenase, N-terminal domain RSC3_04142 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain RSC3_04142 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain RSC3_04143 PF02803 Thiolase, C-terminal domain RSC3_04143 PF00108 Thiolase, N-terminal domain RSC3_04144 PF02754 Cysteine-rich domain RSC3_04144 PF13183 4Fe-4S dicluster domain RSC3_04145 PF13091 PLD-like domain RSC3_04147 PF00750 tRNA synthetases class I (R) RSC3_04147 PF03485 Arginyl tRNA synthetase N terminal domain RSC3_04147 PF05746 DALR anticodon binding domain RSC3_04148 PF09148 Domain of unknown function (DUF1934) RSC3_04149 PF00491 Arginase family RSC3_04150 PF17284 Spermidine synthase tetramerisation domain RSC3_04151 PF00905 Penicillin binding protein transpeptidase domain RSC3_04151 PF00912 Transglycosylase RSC3_04152 PF08741 YwhD family RSC3_04153 PF02163 Peptidase family M50 RSC3_04154 PF01361 Tautomerase enzyme RSC3_04157 PF01966 HD domain RSC3_04158 PF07293 Protein of unknown function (DUF1450) RSC3_04160 PF14154 Domain of unknown function (DUF4306) RSC3_04161 PF03099 Biotin/lipoate A/B protein ligase family RSC3_04162 PF01494 FAD binding domain RSC3_04163 PF07690 Major Facilitator Superfamily RSC3_04165 PF01361 Tautomerase enzyme RSC3_04167 PF00171 Aldehyde dehydrogenase family RSC3_04168 PF01614 Bacterial transcriptional regulator RSC3_04168 PF09339 IclR helix-turn-helix domain RSC3_04170 PF01515 Phosphate acetyl/butaryl transferase RSC3_04171 PF06778 Chlorite dismutase RSC3_04172 PF17735 Biofilm surface layer A RSC3_04173 PF02386 Cation transport protein RSC3_04174 PF09671 Spore coat protein (Spore_GerQ) RSC3_04178 PF00005 ABC transporter RSC3_04180 PF00196 Bacterial regulatory proteins, luxR family RSC3_04180 PF00072 Response regulator receiver domain RSC3_04181 PF04241 Protein of unknown function (DUF423) RSC3_04182 PF00860 Permease family RSC3_04183 PF17261 Family of unknown function (DUF5327) RSC3_04184 PF00171 Aldehyde dehydrogenase family RSC3_04185 PF00171 Aldehyde dehydrogenase family RSC3_04186 PF03167 Uracil DNA glycosylase superfamily RSC3_04187 PF00535 Glycosyl transferase family 2 RSC3_04188 PF08543 Phosphomethylpyrimidine kinase RSC3_04190 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_04190 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_04191 PF00367 phosphotransferase system, EIIB RSC3_04191 PF02378 Phosphotransferase system, EIIC RSC3_04192 PF03123 CAT RNA binding domain RSC3_04192 PF00874 PRD domain RSC3_04194 PF13860 FlgD Ig-like domain RSC3_04194 PF05922 Peptidase inhibitor I9 RSC3_04194 PF02225 PA domain RSC3_04194 PF00082 Subtilase family RSC3_04196 PF00296 Luciferase-like monooxygenase RSC3_04198 PF00881 Nitroreductase family RSC3_04199 PF07687 Peptidase dimerisation domain RSC3_04199 PF01546 Peptidase family M20/M25/M40 RSC3_04200 PF01098 Cell cycle protein RSC3_04201 PF01098 Cell cycle protein RSC3_04202 PF07670 Nucleoside recognition RSC3_04204 PF17368 Spore morphogenesis and germination YwcE RSC3_04207 PF00583 Acetyltransferase (GNAT) family RSC3_04208 PF00664 ABC transporter transmembrane region RSC3_04208 PF00005 ABC transporter RSC3_04208 PF03412 Peptidase C39 family RSC3_04209 PF00005 ABC transporter RSC3_04210 PF00005 ABC transporter RSC3_04210 PF00664 ABC transporter transmembrane region RSC3_04216 PF00196 Bacterial regulatory proteins, luxR family RSC3_04216 PF00072 Response regulator receiver domain RSC3_04218 PF03626 Prokaryotic Cytochrome C oxidase subunit IV RSC3_04219 PF00510 Cytochrome c oxidase subunit III RSC3_04220 PF00115 Cytochrome C and Quinol oxidase polypeptide I RSC3_04221 PF00115 Cytochrome C and Quinol oxidase polypeptide I RSC3_04222 PF00116 Cytochrome C oxidase subunit II, periplasmic domain RSC3_04222 PF02790 Cytochrome C oxidase subunit II, transmembrane domain RSC3_04223 PF16363 GDP-mannose 4,6 dehydratase RSC3_04225 PF03358 NADPH-dependent FMN reductase RSC3_04226 PF04341 Protein of unknown function, DUF485 RSC3_04227 PF00474 Sodium:solute symporter family RSC3_04228 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RSC3_04228 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RSC3_04229 PF01261 Xylose isomerase-like TIM barrel RSC3_04230 PF01261 Xylose isomerase-like TIM barrel RSC3_04231 PF00480 ROK family RSC3_04232 PF02581 Thiamine monophosphate synthase RSC3_04233 PF02110 Hydroxyethylthiazole kinase family RSC3_04234 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family RSC3_04234 PF03466 LysR substrate binding domain RSC3_04237 PF03788 LrgA family RSC3_04238 PF04172 LrgB-like family RSC3_04240 PF00474 Sodium:solute symporter family RSC3_04241 PF10672 S-adenosylmethionine-dependent methyltransferase RSC3_04241 PF17785 PUA-like domain RSC3_04242 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily RSC3_04243 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain RSC3_04243 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_04244 PF01501 Glycosyl transferase family 8 RSC3_04248 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04248 PF07730 Histidine kinase RSC3_04249 PF00072 Response regulator receiver domain RSC3_04249 PF00196 Bacterial regulatory proteins, luxR family RSC3_04250 PF03176 MMPL family RSC3_04251 PF09529 Integral membrane protein (intg_mem_TP0381) RSC3_04252 PF07690 Major Facilitator Superfamily RSC3_04253 PF13378 Enolase C-terminal domain-like RSC3_04253 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain RSC3_04254 PF01081 KDPG and KHG aldolase RSC3_04255 PF00294 pfkB family carbohydrate kinase RSC3_04256 PF09339 IclR helix-turn-helix domain RSC3_04256 PF01614 Bacterial transcriptional regulator RSC3_04257 PF02225 PA domain RSC3_04257 PF04389 Peptidase family M28 RSC3_04258 PF07690 Major Facilitator Superfamily RSC3_04259 PF07690 Major Facilitator Superfamily RSC3_04262 PF04607 Region found in RelA / SpoT proteins RSC3_04263 PF12459 D-Ala-teichoic acid biosynthesis protein RSC3_04264 PF00501 AMP-binding enzyme RSC3_04264 PF13193 AMP-binding enzyme C-terminal domain RSC3_04265 PF03062 MBOAT, membrane-bound O-acyltransferase family RSC3_04266 PF00550 Phosphopantetheine attachment site RSC3_04267 PF04914 DltD protein RSC3_04268 PF01063 Amino-transferase class IV RSC3_04269 PF07690 Major Facilitator Superfamily RSC3_04270 PF02056 Family 4 glycosyl hydrolase RSC3_04270 PF11975 Family 4 glycosyl hydrolase C-terminal domain RSC3_04271 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit RSC3_04272 PF02378 Phosphotransferase system, EIIC RSC3_04273 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit RSC3_04274 PF08279 HTH domain RSC3_04274 PF00874 PRD domain RSC3_04274 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 RSC3_04274 PF05043 Mga helix-turn-helix domain RSC3_04276 PF02245 Methylpurine-DNA glycosylase (MPG) RSC3_04277 PF07729 FCD domain RSC3_04277 PF00392 Bacterial regulatory proteins, gntR family RSC3_04278 PF00285 Citrate synthase, C-terminal domain RSC3_04279 PF03972 MmgE/PrpD family RSC3_04280 PF03972 MmgE/PrpD family RSC3_04282 PF02417 Chromate transporter RSC3_04284 PF00005 ABC transporter RSC3_04284 PF00664 ABC transporter transmembrane region RSC3_04285 PF00005 ABC transporter RSC3_04285 PF00664 ABC transporter transmembrane region RSC3_04286 PF00664 ABC transporter transmembrane region RSC3_04286 PF00005 ABC transporter RSC3_04287 PF13472 GDSL-like Lipase/Acylhydrolase family RSC3_04288 PF17735 Biofilm surface layer A RSC3_04289 PF17735 Biofilm surface layer A RSC3_04290 PF07690 Major Facilitator Superfamily RSC3_04292 PF12679 ABC-2 family transporter protein RSC3_04293 PF13732 Domain of unknown function (DUF4162) RSC3_04293 PF00005 ABC transporter RSC3_04294 PF13396 Phospholipase_D-nuclease N-terminal RSC3_04297 PF08281 Sigma-70, region 4 RSC3_04297 PF04542 Sigma-70 region 2 RSC3_04298 PF07690 Major Facilitator Superfamily RSC3_04299 PF07690 Major Facilitator Superfamily RSC3_04302 PF00199 Catalase RSC3_04302 PF06628 Catalase-related immune-responsive RSC3_04303 PF00199 Catalase RSC3_04303 PF06628 Catalase-related immune-responsive RSC3_04304 PF01475 Ferric uptake regulator family RSC3_04305 PF00762 Ferrochelatase RSC3_04306 PF00544 Pectate lyase RSC3_04307 PF01256 Carbohydrate kinase RSC3_04308 PF00005 ABC transporter RSC3_04308 PF00664 ABC transporter transmembrane region RSC3_04309 PF00664 ABC transporter transmembrane region RSC3_04309 PF00005 ABC transporter RSC3_04310 PF02322 Cytochrome bd terminal oxidase subunit II RSC3_04311 PF01654 Cytochrome bd terminal oxidase subunit I RSC3_04312 PF01226 Formate/nitrite transporter RSC3_04314 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain RSC3_04314 PF00390 Malic enzyme, N-terminal domain RSC3_04314 PF03949 Malic enzyme, NAD binding domain RSC3_04315 PF03553 Na+/H+ antiporter family RSC3_04316 PF00206 Lyase RSC3_04316 PF10415 Fumarase C C-terminus RSC3_04317 PF00710 Asparaginase, N-terminal RSC3_04317 PF17763 Glutaminase/Asparaginase C-terminal domain RSC3_04318 PF01381 Helix-turn-helix RSC3_04319 PF10282 Lactonase, 7-bladed beta-propeller RSC3_04320 PF00072 Response regulator receiver domain RSC3_04320 PF00486 Transcriptional regulatory protein, C terminal RSC3_04321 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04322 PF00005 ABC transporter RSC3_04323 PF02687 FtsX-like permease family RSC3_04324 PF06486 Protein of unknown function (DUF1093) RSC3_04327 PF01522 Polysaccharide deacetylase RSC3_04328 PF00392 Bacterial regulatory proteins, gntR family RSC3_04328 PF00155 Aminotransferase class I and II RSC3_04330 PF03390 2-hydroxycarboxylate transporter family RSC3_04331 PF03009 Glycerophosphoryl diester phosphodiesterase family RSC3_04332 PF05901 Excalibur calcium-binding domain RSC3_04334 PF00884 Sulfatase RSC3_04335 PF17353 Family of unknown function (DUF5381) RSC3_04336 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) RSC3_04336 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 RSC3_04337 PF01316 Arginine repressor, DNA binding domain RSC3_04337 PF02863 Arginine repressor, C-terminal domain RSC3_04339 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain RSC3_04339 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain RSC3_04340 PF13520 Amino acid permease RSC3_04341 PF00696 Amino acid kinase family RSC3_04343 PF00232 Glycosyl hydrolase family 1 RSC3_04344 PF02378 Phosphotransferase system, EIIC RSC3_04346 PF08281 Sigma-70, region 4 RSC3_04346 PF04542 Sigma-70 region 2 RSC3_04348 PF01546 Peptidase family M20/M25/M40 RSC3_04348 PF07687 Peptidase dimerisation domain RSC3_04349 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_04349 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_04350 PF08244 Glycosyl hydrolases family 32 C terminal RSC3_04350 PF00251 Glycosyl hydrolases family 32 N-terminal domain RSC3_04351 PF01306 LacY proton/sugar symporter RSC3_04352 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_04353 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_04355 PF00356 Bacterial regulatory proteins, lacI family RSC3_04358 PF01717 Cobalamin-independent synthase, Catalytic domain RSC3_04359 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RSC3_04360 PF00535 Glycosyl transferase family 2 RSC3_04361 PF16363 GDP-mannose 4,6 dehydratase RSC3_04366 PF01773 Na+ dependent nucleoside transporter N-terminus RSC3_04366 PF07662 Na+ dependent nucleoside transporter C-terminus RSC3_04367 PF00199 Catalase RSC3_04367 PF18011 C-terminal domain found in long catalases RSC3_04367 PF06628 Catalase-related immune-responsive RSC3_04369 PF00232 Glycosyl hydrolase family 1 RSC3_04370 PF02378 Phosphotransferase system, EIIC RSC3_04370 PF00367 phosphotransferase system, EIIB RSC3_04370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RSC3_04371 PF00367 phosphotransferase system, EIIB RSC3_04371 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RSC3_04371 PF02378 Phosphotransferase system, EIIC RSC3_04372 PF03123 CAT RNA binding domain RSC3_04372 PF00874 PRD domain RSC3_04373 PF02361 Cobalt transport protein RSC3_04374 PF00005 ABC transporter RSC3_04375 PF09819 ABC-type cobalt transport system, permease component RSC3_04376 PF03070 TENA/THI-4/PQQC family RSC3_04378 PF00463 Isocitrate lyase family RSC3_04379 PF01274 Malate synthase RSC3_04381 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase RSC3_04382 PF10898 Protein of unknown function (DUF2716) RSC3_04384 PF14176 YxiJ-like protein RSC3_04391 PF02687 FtsX-like permease family RSC3_04392 PF00005 ABC transporter RSC3_04393 PF00005 ABC transporter RSC3_04394 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04395 PF00072 Response regulator receiver domain RSC3_04395 PF00486 Transcriptional regulatory protein, C terminal RSC3_04396 PF00232 Glycosyl hydrolase family 1 RSC3_04397 PF00367 phosphotransferase system, EIIB RSC3_04397 PF02378 Phosphotransferase system, EIIC RSC3_04397 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 RSC3_04399 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family RSC3_04400 PF16369 C-terminal lipocalin-like domain RSC3_04400 PF04616 Glycosyl hydrolases family 43 RSC3_04401 PF03880 DbpA RNA binding domain RSC3_04401 PF00270 DEAD/DEAH box helicase RSC3_04401 PF00271 Helicase conserved C-terminal domain RSC3_04404 PF02885 Glycosyl transferase family, helical bundle domain RSC3_04404 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain RSC3_04404 PF00591 Glycosyl transferase family, a/b domain RSC3_04405 PF01773 Na+ dependent nucleoside transporter N-terminus RSC3_04405 PF07662 Na+ dependent nucleoside transporter C-terminus RSC3_04406 PF01791 DeoC/LacD family aldolase RSC3_04407 PF04198 Putative sugar-binding domain RSC3_04410 PF00990 Diguanylate cyclase, GGDEF domain RSC3_04411 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) RSC3_04413 PF03170 Bacterial cellulose synthase subunit RSC3_04414 PF00155 Aminotransferase class I and II RSC3_04421 PF01116 Fructose-bisphosphate aldolase class-II RSC3_04422 PF01261 Xylose isomerase-like TIM barrel RSC3_04423 PF01261 Xylose isomerase-like TIM barrel RSC3_04424 PF02894 Oxidoreductase family, C-terminal alpha/beta domain RSC3_04424 PF01408 Oxidoreductase family, NAD-binding Rossmann fold RSC3_04425 PF07690 Major Facilitator Superfamily RSC3_04426 PF01261 Xylose isomerase-like TIM barrel RSC3_04427 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain RSC3_04427 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain RSC3_04427 PF00205 Thiamine pyrophosphate enzyme, central domain RSC3_04428 PF00294 pfkB family carbohydrate kinase RSC3_04429 PF04962 KduI/IolB family RSC3_04430 PF00171 Aldehyde dehydrogenase family RSC3_04431 PF08220 DeoR-like helix-turn-helix domain RSC3_04431 PF00455 DeoR C terminal sensor domain RSC3_04432 PF00248 Aldo/keto reductase family RSC3_04433 PF03009 Glycerophosphoryl diester phosphodiesterase family RSC3_04434 PF07690 Major Facilitator Superfamily RSC3_04435 PF00183 Hsp90 protein RSC3_04436 PF00005 ABC transporter RSC3_04436 PF12848 ABC transporter RSC3_04441 PF01497 Periplasmic binding protein RSC3_04445 PF07664 Ferrous iron transport protein B C terminus RSC3_04445 PF02421 Ferrous iron transport protein B RSC3_04445 PF17910 FeoB cytosolic helical domain RSC3_04445 PF07670 Nucleoside recognition RSC3_04446 PF07664 Ferrous iron transport protein B C terminus RSC3_04446 PF17910 FeoB cytosolic helical domain RSC3_04446 PF02421 Ferrous iron transport protein B RSC3_04446 PF07670 Nucleoside recognition RSC3_04448 PF01757 Acyltransferase family RSC3_04449 PF02687 FtsX-like permease family RSC3_04450 PF00005 ABC transporter RSC3_04451 PF00005 ABC transporter RSC3_04452 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04453 PF00072 Response regulator receiver domain RSC3_04453 PF00486 Transcriptional regulatory protein, C terminal RSC3_04455 PF05227 CHASE3 domain RSC3_04455 PF00672 HAMP domain RSC3_04455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain RSC3_04456 PF01235 Sodium:alanine symporter family RSC3_04457 PF01262 Alanine dehydrogenase/PNT, C-terminal domain RSC3_04457 PF05222 Alanine dehydrogenase/PNT, N-terminal domain RSC3_04458 PF07745 Glycosyl hydrolase family 53 RSC3_04459 PF08532 Beta-galactosidase trimerisation domain RSC3_04459 PF08533 Beta-galactosidase C-terminal domain RSC3_04459 PF02449 Beta-galactosidase RSC3_04460 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_04461 PF00528 Binding-protein-dependent transport system inner membrane component RSC3_04462 PF13416 Bacterial extracellular solute-binding protein RSC3_04463 PF00356 Bacterial regulatory proteins, lacI family RSC3_04464 PF00356 Bacterial regulatory proteins, lacI family RSC3_04465 PF00288 GHMP kinases N terminal domain RSC3_04465 PF10509 Galactokinase galactose-binding signature RSC3_04465 PF08544 GHMP kinases C terminal RSC3_04466 PF00288 GHMP kinases N terminal domain RSC3_04466 PF08544 GHMP kinases C terminal RSC3_04466 PF10509 Galactokinase galactose-binding signature RSC3_04467 PF16363 GDP-mannose 4,6 dehydratase RSC3_04468 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain RSC3_04468 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain RSC3_04469 PF01325 Iron dependent repressor, N-terminal DNA binding domain RSC3_04469 PF00480 ROK family RSC3_04471 PF00581 Rhodanese-like domain RSC3_04472 PF01878 EVE domain RSC3_04473 PF00392 Bacterial regulatory proteins, gntR family RSC3_04473 PF07729 FCD domain RSC3_04474 PF02782 FGGY family of carbohydrate kinases, C-terminal domain RSC3_04474 PF00370 FGGY family of carbohydrate kinases, N-terminal domain RSC3_04475 PF02447 GntP family permease RSC3_04476 PF02447 GntP family permease RSC3_04477 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain RSC3_04477 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase RSC3_04478 PF00465 Iron-containing alcohol dehydrogenase RSC3_04478 PF00171 Aldehyde dehydrogenase family RSC3_04479 PF00578 AhpC/TSA family RSC3_04480 PF13192 Thioredoxin domain RSC3_04480 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_04482 PF00324 Amino acid permease RSC3_04483 PF06874 Firmicute fructose-1,6-bisphosphatase RSC3_04484 PF13192 Thioredoxin domain RSC3_04484 PF07992 Pyridine nucleotide-disulphide oxidoreductase RSC3_04485 PF01497 Periplasmic binding protein RSC3_04486 PF01497 Periplasmic binding protein RSC3_04487 PF01032 FecCD transport family RSC3_04488 PF01032 FecCD transport family RSC3_04491 PF00005 ABC transporter RSC3_04493 PF07730 Histidine kinase RSC3_04493 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04494 PF00072 Response regulator receiver domain RSC3_04494 PF00196 Bacterial regulatory proteins, luxR family RSC3_04498 PF02590 Predicted SPOUT methyltransferase RSC3_04499 PF14116 YyzF-like protein RSC3_04501 PF00583 Acetyltransferase (GNAT) family RSC3_04504 PF13180 PDZ domain RSC3_04505 PF00753 Metallo-beta-lactamase superfamily RSC3_04506 PF09648 YycH protein RSC3_04507 PF07435 YycH protein RSC3_04508 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04508 PF00512 His Kinase A (phospho-acceptor) domain RSC3_04508 PF13426 PAS domain RSC3_04508 PF00672 HAMP domain RSC3_04509 PF00072 Response regulator receiver domain RSC3_04509 PF00486 Transcriptional regulatory protein, C terminal RSC3_04510 PF00293 NUDIX domain RSC3_04511 PF00709 Adenylosuccinate synthetase RSC3_04513 PF03796 DnaB-like helicase C terminal domain RSC3_04513 PF00772 DnaB-like helicase N terminal domain RSC3_04514 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) RSC3_04516 PF14174 YycC-like protein RSC3_04517 PF07690 Major Facilitator Superfamily RSC3_04518 PF01979 Amidohydrolase family RSC3_04519 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase RSC3_04520 PF00392 Bacterial regulatory proteins, gntR family RSC3_04520 PF07702 UTRA domain RSC3_04521 PF01380 SIS domain RSC3_04522 PF00367 phosphotransferase system, EIIB RSC3_04522 PF02378 Phosphotransferase system, EIIC RSC3_04523 PF03948 Ribosomal protein L9, C-terminal domain RSC3_04523 PF01281 Ribosomal protein L9, N-terminal domain RSC3_04524 PF02272 DHHA1 domain RSC3_04524 PF01368 DHH family RSC3_04525 PF09991 Predicted membrane protein (DUF2232) RSC3_04528 PF07875 Coat F domain RSC3_04529 PF00582 Universal stress protein family RSC3_04530 PF01740 STAS domain RSC3_04530 PF00916 Sulfate permease family RSC3_04531 PF07690 Major Facilitator Superfamily RSC3_04532 PF01084 Ribosomal protein S18 RSC3_04533 PF00436 Single-strand binding protein family RSC3_04534 PF01250 Ribosomal protein S6 RSC3_04535 PF01926 50S ribosome-binding GTPase RSC3_04535 PF06071 Protein of unknown function (DUF933) RSC3_04536 PF06107 Bacterial protein of unknown function (DUF951) RSC3_04539 PF06866 Protein of unknown function (DUF1256) RSC3_04540 PF17762 HTH domain found in ParB protein RSC3_04540 PF02195 ParB-like nuclease domain RSC3_04541 PF13614 AAA domain RSC3_04542 PF02627 Carboxymuconolactone decarboxylase family RSC3_04543 PF04542 Sigma-70 region 2 RSC3_04543 PF08281 Sigma-70, region 4 RSC3_04543 PF12680 SnoaL-like domain RSC3_04544 PF17762 HTH domain found in ParB protein RSC3_04544 PF02195 ParB-like nuclease domain RSC3_04545 PF02527 rRNA small subunit methyltransferase G RSC3_04546 PF13932 GidA associated domain RSC3_04546 PF01134 Glucose inhibited division protein A RSC3_04547 PF01926 50S ribosome-binding GTPase RSC3_04547 PF12631 MnmE helical domain RSC3_04547 PF10396 GTP-binding protein TrmE N-terminus RSC3_04548 PF14804 Jag N-terminus RSC3_04548 PF01424 R3H domain RSC3_04549 PF02096 60Kd inner membrane protein RSC3_04550 PF00825 Ribonuclease P RSC3_04551 PF00468 Ribosomal protein L34 RSC3_04552 PF08299 Bacterial dnaA protein helix-turn-helix RSC3_04552 PF11638 DnaA N-terminal domain RSC3_04552 PF00308 Bacterial dnaA protein RSC3_04553 PF00308 Bacterial dnaA protein RSC3_04553 PF08299 Bacterial dnaA protein helix-turn-helix RSC3_04553 PF11638 DnaA N-terminal domain RSC3_04554 PF00712 DNA polymerase III beta subunit, N-terminal domain RSC3_04554 PF02767 DNA polymerase III beta subunit, central domain RSC3_04554 PF02768 DNA polymerase III beta subunit, C-terminal domain RSC3_04557 PF02463 RecF/RecN/SMC N terminal domain RSC3_04558 PF02463 RecF/RecN/SMC N terminal domain RSC3_04559 PF02463 RecF/RecN/SMC N terminal domain RSC3_04560 PF04025 Domain of unknown function (DUF370) RSC3_04561 PF01751 Toprim domain RSC3_04561 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04561 PF00986 DNA gyrase B subunit, carboxyl terminus RSC3_04561 PF00204 DNA gyrase B RSC3_04562 PF00204 DNA gyrase B RSC3_04562 PF00986 DNA gyrase B subunit, carboxyl terminus RSC3_04562 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase RSC3_04562 PF01751 Toprim domain RSC3_04563 PF03989 DNA gyrase C-terminal domain, beta-propeller RSC3_04563 PF00521 DNA gyrase/topoisomerase IV, subunit A RSC3_04567 PF14175 YaaC-like Protein RSC3_04568 PF00478 IMP dehydrogenase / GMP reductase domain RSC3_04568 PF00571 CBS domain RSC3_04569 PF00768 D-alanyl-D-alanine carboxypeptidase RSC3_04569 PF07943 Penicillin-binding protein 5, C-terminal domain RSC3_04570 PF01680 SOR/SNZ family RSC3_04571 PF01174 SNO glutamine amidotransferase family RSC3_04572 PF02403 Seryl-tRNA synthetase N-terminal domain RSC3_04572 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) RSC3_04573 PF02595 Glycerate kinase family RSC3_04574 PF02447 GntP family permease RSC3_04575 PF05651 Putative sugar diacid recognition RSC3_04575 PF17853 GGDEF-like domain RSC3_04575 PF13556 PucR C-terminal helix-turn-helix domain RSC3_04577 PF01712 Deoxynucleoside kinase RSC3_04578 PF01712 Deoxynucleoside kinase RSC3_04579 PF00704 Glycosyl hydrolases family 18 RSC3_04579 PF01476 LysM domain RSC3_04580 PF00704 Glycosyl hydrolases family 18 RSC3_04580 PF01476 LysM domain RSC3_04581 PF00857 Isochorismatase family RSC3_04582 PF14437 MafB19-like deaminase RSC3_04583 PF12169 DNA polymerase III subunits gamma and tau domain III RSC3_04584 PF12169 DNA polymerase III subunits gamma and tau domain III RSC3_04585 PF02575 YbaB/EbfC DNA-binding family RSC3_04586 PF02132 RecR protein RSC3_04586 PF13662 Toprim domain RSC3_04587 PF10704 Protein of unknown function (DUF2508) RSC3_04588 PF07441 SigmaK-factor processing regulatory protein BofA RSC3_04592 PF10764 Inhibitor of sigma-G Gin RSC3_04593 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein RSC3_04594 PF05816 Toxic anion resistance protein (TelA) RSC3_04595 PF01276 Orn/Lys/Arg decarboxylase, major domain RSC3_04595 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain RSC3_04596 PF02223 Thymidylate kinase RSC3_04597 PF02223 Thymidylate kinase RSC3_04598 PF06153 Cyclic-di-AMP receptor RSC3_04599 PF03885 Protein of unknown function (DUF327) RSC3_04600 PF09115 DNA polymerase III, delta subunit, C terminal RSC3_04601 PF04468 PSP1 C-terminal conserved region RSC3_04602 PF06156 Initiation control protein YabA RSC3_04603 PF05175 Methyltransferase small domain RSC3_04604 PF01541 GIY-YIG catalytic domain RSC3_04605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RSC3_04606 PF18277 AbrB C-terminal domain RSC3_04606 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RSC3_04607 PF08264 Anticodon-binding domain of tRNA RSC3_04607 PF09334 tRNA synthetases class I (M) RSC3_04607 PF01588 Putative tRNA binding domain RSC3_04608 PF01026 TatD related DNase RSC3_04609 PF06725 3D domain RSC3_04609 PF03990 G5-linked-Ubiquitin-like domain RSC3_04609 PF07501 G5 domain RSC3_04610 PF13331 Domain of unknown function (DUF4093) RSC3_04610 PF13662 Toprim domain RSC3_04611 PF13662 Toprim domain RSC3_04611 PF13331 Domain of unknown function (DUF4093) RSC3_04612 PF00398 Ribosomal RNA adenine dimethylase RSC3_04613 PF05582 YabG peptidase U57 RSC3_04614 PF06257 Biofilm formation stimulator VEG RSC3_04615 PF00269 Small, acid-soluble spore proteins, alpha/beta type RSC3_04616 PF08544 GHMP kinases C terminal RSC3_04616 PF00288 GHMP kinases N terminal domain RSC3_04617 PF09182 Bacterial purine repressor, N-terminal RSC3_04617 PF00156 Phosphoribosyl transferase domain RSC3_04618 PF01042 Endoribonuclease L-PSP RSC3_04619 PF04026 SpoVG RSC3_04620 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_04620 PF00483 Nucleotidyl transferase RSC3_04621 PF14572 Phosphoribosyl synthetase-associated domain RSC3_04621 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase RSC3_04622 PF14693 Ribosomal protein TL5, C-terminal domain RSC3_04622 PF01386 Ribosomal L25p family RSC3_04623 PF01195 Peptidyl-tRNA hydrolase RSC3_04624 PF10955 Protein of unknown function (DUF2757) RSC3_04625 PF02559 CarD-like/TRCF domain RSC3_04625 PF00270 DEAD/DEAH box helicase RSC3_04625 PF00271 Helicase conserved C-terminal domain RSC3_04625 PF03461 TRCF domain RSC3_04625 PF17757 UvrB interaction domain RSC3_04626 PF17757 UvrB interaction domain RSC3_04626 PF00271 Helicase conserved C-terminal domain RSC3_04626 PF03461 TRCF domain RSC3_04626 PF02559 CarD-like/TRCF domain RSC3_04626 PF00270 DEAD/DEAH box helicase RSC3_04627 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RSC3_04627 PF15714 Stage V sporulation protein T C-terminal, transcription factor RSC3_04628 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin RSC3_04628 PF15714 Stage V sporulation protein T C-terminal, transcription factor RSC3_04629 PF14667 Polysaccharide biosynthesis C-terminal domain RSC3_04629 PF01943 Polysaccharide biosynthesis protein RSC3_04630 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases RSC3_04630 PF03819 MazG nucleotide pyrophosphohydrolase domain RSC3_04631 PF01479 S4 domain RSC3_04632 PF07873 YabP family RSC3_04633 PF04977 Septum formation initiator RSC3_04634 PF00575 S1 RNA binding domain RSC3_04636 PF07228 Stage II sporulation protein E (SpoIIE) RSC3_04637 PF00092 von Willebrand factor type A domain RSC3_04638 PF00069 Protein kinase domain RSC3_04639 PF01171 PP-loop family RSC3_04639 PF09179 TilS substrate binding domain RSC3_04639 PF11734 TilS substrate C-terminal domain RSC3_04640 PF00156 Phosphoribosyl transferase domain RSC3_04641 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_04641 PF17862 AAA+ lid domain RSC3_04641 PF06480 FtsH Extracellular RSC3_04641 PF01434 Peptidase family M41 RSC3_04642 PF03309 Type III pantothenate kinase RSC3_04643 PF01430 Hsp33 protein RSC3_04644 PF13145 PPIC-type PPIASE domain RSC3_04645 PF00291 Pyridoxal-phosphate dependent enzyme RSC3_04646 PF04715 Anthranilate synthase component I, N terminal region RSC3_04646 PF00425 chorismate binding enzyme RSC3_04647 PF00117 Glutamine amidotransferase class-I RSC3_04648 PF01063 Amino-transferase class IV RSC3_04649 PF00809 Pterin binding enzyme RSC3_04650 PF02152 Dihydroneopterin aldolase RSC3_04651 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) RSC3_04652 PF01381 Helix-turn-helix RSC3_04653 PF01207 Dihydrouridine synthase (Dus) RSC3_04654 PF00152 tRNA synthetases class II (D, K and N) RSC3_04654 PF01336 OB-fold nucleic acid binding domain RSC3_04655 PF00152 tRNA synthetases class II (D, K and N) RSC3_04655 PF01336 OB-fold nucleic acid binding domain RSC3_04662 PF17727 CtsR C-terminal dimerization domain RSC3_04662 PF05848 CtsR N-terminal HTH domain RSC3_04663 PF02151 UvrB/uvrC motif RSC3_04664 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain RSC3_04665 PF00004 ATPase family associated with various cellular activities (AAA) RSC3_04665 PF07724 AAA domain (Cdc48 subfamily) RSC3_04665 PF17871 AAA lid domain RSC3_04665 PF02861 Clp amino terminal domain, pathogenicity island component RSC3_04665 PF10431 C-terminal, D2-small domain, of ClpB protein RSC3_04666 PF18073 Rubredoxin metal binding domain RSC3_04667 PF02457 DisA bacterial checkpoint controller nucleotide-binding RSC3_04667 PF10635 DisA bacterial checkpoint controller linker region RSC3_04669 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase RSC3_04670 PF02542 YgbB family RSC3_04671 PF00749 tRNA synthetases class I (E and Q), catalytic domain RSC3_04672 PF00132 Bacterial transferase hexapeptide (six repeats) RSC3_04673 PF01406 tRNA synthetases class I (C) catalytic domain RSC3_04673 PF09190 DALR domain RSC3_04674 PF00636 Ribonuclease III domain