locus-tag class description KY998_00010 PF14490 Helix-hairpin-helix containing domain KY998_00010 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KY998_00010 PF13538 UvrD-like helicase C-terminal domain KY998_00015 PF05239 PRC-barrel domain KY998_00025 PF13056 Protein of unknown function (DUF3918) KY998_00035 PF02272 DHHA1 domain KY998_00035 PF01411 tRNA synthetases class II (A) KY998_00035 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KY998_00040 PF06135 IreB regulatory phosphoprotein KY998_00045 PF03652 Holliday junction resolvase KY998_00050 PF06949 Protein of unknown function (DUF1292) KY998_00055 PF02618 YceG-like family KY998_00060 PF01596 O-methyltransferase KY998_00070 PF16325 Peptidase family U32 C-terminal domain KY998_00070 PF01136 Peptidase family U32 KY998_00075 PF00485 Phosphoribulokinase / Uridine kinase family KY998_00080 PF01272 Transcription elongation factor, GreA/GreB, C-term KY998_00080 PF03449 Transcription elongation factor, N-terminal KY998_00085 PF03717 Penicillin-binding Protein dimerisation domain KY998_00085 PF00905 Penicillin binding protein transpeptidase domain KY998_00090 PF07423 Domain of unknown function (DUF1510) KY998_00095 PF10750 Protein of unknown function (DUF2536) KY998_00100 PF13649 Methyltransferase domain KY998_00105 PF01048 Phosphorylase superfamily KY998_00115 PF01053 Cys/Met metabolism PLP-dependent enzyme KY998_00120 PF14143 YrhC-like protein KY998_00125 PF09501 Probable sporulation protein (Bac_small_yrzI) KY998_00140 PF08241 Methyltransferase domain KY998_00145 PF17936 Bacterial Ig domain KY998_00145 PF00082 Subtilase family KY998_00155 PF16295 Tetracyclin repressor-like, C-terminal domain KY998_00155 PF00440 Bacterial regulatory proteins, tetR family KY998_00160 PF00667 FAD binding domain KY998_00160 PF00175 Oxidoreductase NAD-binding domain KY998_00160 PF00258 Flavodoxin KY998_00160 PF00067 Cytochrome P450 KY998_00170 PF07690 Major Facilitator Superfamily KY998_00175 PF03466 LysR substrate binding domain KY998_00175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_00180 PF01497 Periplasmic binding protein KY998_00190 PF02602 Uroporphyrinogen-III synthase HemD KY998_00200 PF01638 HxlR-like helix-turn-helix KY998_00205 PF07690 Major Facilitator Superfamily KY998_00210 PF00248 Aldo/keto reductase family KY998_00220 PF03814 Potassium-transporting ATPase A subunit KY998_00230 PF02669 K+-transporting ATPase, c chain KY998_00235 PF02702 Osmosensitive K+ channel His kinase sensor domain KY998_00240 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain KY998_00240 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain KY998_00245 PF02805 Metal binding domain of Ada KY998_00245 PF12833 Helix-turn-helix domain KY998_00250 PF00302 Chloramphenicol acetyltransferase KY998_00255 PF14145 YrhK-like protein KY998_00265 PF00158 Sigma-54 interaction domain KY998_00265 PF00874 PRD domain KY998_00265 PF03610 PTS system fructose IIA component KY998_00270 PF03610 PTS system fructose IIA component KY998_00275 PF03830 PTS system sorbose subfamily IIB component KY998_00280 PF03609 PTS system sorbose-specific iic component KY998_00285 PF03613 PTS system mannose/fructose/sorbose family IID component KY998_00290 PF00251 Glycosyl hydrolases family 32 N-terminal domain KY998_00290 PF08244 Glycosyl hydrolases family 32 C terminal KY998_00310 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KY998_00310 PF04616 Glycosyl hydrolases family 43 KY998_00315 PF00067 Cytochrome P450 KY998_00330 PF06445 GyrI-like small molecule binding domain KY998_00340 PF00106 short chain dehydrogenase KY998_00345 PF12833 Helix-turn-helix domain KY998_00345 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term KY998_00360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY998_00360 PF00005 ABC transporter KY998_00380 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_00385 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_00390 PF00196 Bacterial regulatory proteins, luxR family KY998_00390 PF00072 Response regulator receiver domain KY998_00395 PF07730 Histidine kinase KY998_00400 PF00487 Fatty acid desaturase KY998_00405 PF01638 HxlR-like helix-turn-helix KY998_00410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KY998_00415 PF01380 SIS domain KY998_00420 PF14552 Tautomerase enzyme KY998_00425 PF00398 Ribosomal RNA adenine dimethylase KY998_00455 PF13686 DsrE/DsrF/DrsH-like family KY998_00460 PF12368 Rhodanase C-terminal KY998_00460 PF17773 UPF0176 acylphosphatase like domain KY998_00460 PF00581 Rhodanese-like domain KY998_00465 PF01206 Sulfurtransferase TusA KY998_00465 PF00581 Rhodanese-like domain KY998_00470 PF13686 DsrE/DsrF/DrsH-like family KY998_00485 PF01206 Sulfurtransferase TusA KY998_00490 PF01925 Sulfite exporter TauE/SafE KY998_00495 PF00085 Thioredoxin KY998_00505 PF00072 Response regulator receiver domain KY998_00505 PF00196 Bacterial regulatory proteins, luxR family KY998_00515 PF00753 Metallo-beta-lactamase superfamily KY998_00530 PF07690 Major Facilitator Superfamily KY998_00535 PF01568 Molydopterin dinucleotide binding domain KY998_00535 PF00384 Molybdopterin oxidoreductase KY998_00535 PF14710 Respiratory nitrate reductase alpha N-terminal KY998_00540 PF14711 Respiratory nitrate reductase beta C-terminal KY998_00540 PF13247 4Fe-4S dicluster domain KY998_00545 PF02613 Nitrate reductase delta subunit KY998_00560 PF02378 Phosphotransferase system, EIIC KY998_00565 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KY998_00570 PF00232 Glycosyl hydrolase family 1 KY998_00575 PF00381 PTS HPr component phosphorylation site KY998_00595 PF00583 Acetyltransferase (GNAT) family KY998_00610 PF01042 Endoribonuclease L-PSP KY998_00615 PF00291 Pyridoxal-phosphate dependent enzyme KY998_00625 PF01042 Endoribonuclease L-PSP KY998_00635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KY998_00635 PF01411 tRNA synthetases class II (A) KY998_00635 PF02272 DHHA1 domain KY998_00640 PF04542 Sigma-70 region 2 KY998_00640 PF04545 Sigma-70, region 4 KY998_00650 PF07849 Protein of unknown function (DUF1641) KY998_00655 PF00037 4Fe-4S binding domain KY998_00655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KY998_00655 PF01568 Molydopterin dinucleotide binding domain KY998_00655 PF00384 Molybdopterin oxidoreductase KY998_00655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KY998_00660 PF10057 Uncharacterized conserved protein (DUF2294) KY998_00670 PF00657 GDSL-like Lipase/Acylhydrolase KY998_00680 PF08970 Sporulation inhibitor A KY998_00690 PF01926 50S ribosome-binding GTPase KY998_00695 PF08501 Shikimate dehydrogenase substrate binding domain KY998_00695 PF01488 Shikimate / quinate 5-dehydrogenase KY998_00695 PF18317 Shikimate 5'-dehydrogenase C-terminal domain KY998_00700 PF01985 CRS1 / YhbY (CRM) domain KY998_00705 PF01467 Cytidylyltransferase-like KY998_00710 PF01966 HD domain KY998_00720 PF13649 Methyltransferase domain KY998_00725 PF14748 Pyrroline-5-carboxylate reductase dimerisation KY998_00725 PF03807 NADP oxidoreductase coenzyme F420-dependent KY998_00730 PF10531 SLBB domain KY998_00735 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY998_00740 PF13567 Domain of unknown function (DUF4131) KY998_00740 PF03772 Competence protein KY998_00740 PF00753 Metallo-beta-lactamase superfamily KY998_00745 PF14141 YqzM-like protein KY998_00750 PF06144 DNA polymerase III, delta subunit KY998_00760 PF01649 Ribosomal protein S20 KY998_00765 PF03418 Germination protease KY998_00770 PF07454 Stage II sporulation protein P (SpoIIP) KY998_00775 PF12438 Protein of unknown function (DUF3679) KY998_00780 PF06421 GTP-binding protein LepA C-terminus KY998_00780 PF03144 Elongation factor Tu domain 2 KY998_00780 PF00009 Elongation factor Tu GTP binding domain KY998_00780 PF00679 Elongation factor G C-terminus KY998_00785 PF04055 Radical SAM superfamily KY998_00785 PF06969 HemN C-terminal domain KY998_00790 PF01628 HrcA protein C terminal domain KY998_00795 PF01025 GrpE KY998_00800 PF00012 Hsp70 protein KY998_00805 PF00684 DnaJ central domain KY998_00805 PF01556 DnaJ C terminal domain KY998_00805 PF00226 DnaJ domain KY998_00815 PF04452 RNA methyltransferase KY998_00820 PF00919 Uncharacterized protein family UPF0004 KY998_00820 PF01938 TRAM domain KY998_00820 PF04055 Radical SAM superfamily KY998_00825 PF01791 DeoC/LacD family aldolase KY998_00830 PF02690 Na+/Pi-cotransporter KY998_00835 PF01165 Ribosomal protein S21 KY998_00840 PF09424 Yqey-like protein KY998_00845 PF01972 Serine dehydrogenase proteinase KY998_00845 PF01957 NfeD-like C-terminal, partner-binding KY998_00850 PF12127 SigmaW regulon antibacterial KY998_00860 PF07873 YabP family KY998_00865 PF06898 Putative stage IV sporulation protein YqfD KY998_00870 PF02562 PhoH-like protein KY998_00875 PF01966 HD domain KY998_00875 PF07698 7TM receptor with intracellular HD hydrolase KY998_00875 PF07697 7TM-HD extracellular KY998_00880 PF02130 Uncharacterized protein family UPF0054 KY998_00885 PF01219 Prokaryotic diacylglycerol kinase KY998_00890 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY998_00895 PF01926 50S ribosome-binding GTPase KY998_00895 PF07650 KH domain KY998_00900 PF14006 YqzL-like protein KY998_00905 PF11967 Recombination protein O N terminal KY998_00905 PF02565 Recombination protein O C terminal KY998_00910 PF02091 Glycyl-tRNA synthetase alpha subunit KY998_00915 PF02092 Glycyl-tRNA synthetase beta subunit KY998_00920 PF00571 CBS domain KY998_00920 PF08279 HTH domain KY998_00925 PF03618 Kinase/pyrophosphorylase KY998_00930 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 KY998_00935 PF01807 CHC2 zinc finger KY998_00935 PF08275 DNA primase catalytic core, N-terminal domain KY998_00935 PF10410 DnaB-helicase binding domain of primase KY998_00945 PF04545 Sigma-70, region 4 KY998_00945 PF04539 Sigma-70 region 3 KY998_00945 PF04542 Sigma-70 region 2 KY998_00945 PF00140 Sigma-70 factor, region 1.2 KY998_00945 PF03979 Sigma-70 factor, region 1.1 KY998_00950 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KY998_00965 PF14431 YwqJ-like deaminase KY998_00965 PF14449 Pre-toxin TG KY998_00965 PF04740 LXG domain of WXG superfamily KY998_00985 PF04493 Endonuclease V KY998_00990 PF04816 tRNA (adenine(22)-N(1))-methyltransferase KY998_00995 PF01784 NIF3 (NGG1p interacting factor 3) KY998_01000 PF02401 LytB protein KY998_01015 PF01261 Xylose isomerase-like TIM barrel KY998_01020 PF11116 Protein of unknown function (DUF2624) KY998_01025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_01025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_01030 PF00005 ABC transporter KY998_01035 PF00950 ABC 3 transport family KY998_01040 PF01475 Ferric uptake regulator family KY998_01055 PF04551 GcpE protein KY998_01065 PF06691 Protein of unknown function (DUF1189) KY998_01070 PF04306 Protein of unknown function (DUF456) KY998_01075 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KY998_01075 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KY998_01080 PF07690 Major Facilitator Superfamily KY998_01085 PF03717 Penicillin-binding Protein dimerisation domain KY998_01085 PF00905 Penicillin binding protein transpeptidase domain KY998_01090 PF12849 PBP superfamily domain KY998_01095 PF00528 Binding-protein-dependent transport system inner membrane component KY998_01100 PF00528 Binding-protein-dependent transport system inner membrane component KY998_01110 PF00005 ABC transporter KY998_01135 PF00005 ABC transporter KY998_01170 PF00534 Glycosyl transferases group 1 KY998_01170 PF13439 Glycosyltransferase Family 4 KY998_01175 PF00471 Ribosomal protein L33 KY998_01180 PF01812 5-formyltetrahydrofolate cyclo-ligase family KY998_01190 PF01694 Rhomboid family KY998_01200 PF06014 Bacterial protein of unknown function (DUF910) KY998_01205 PF00480 ROK family KY998_01210 PF00884 Sulfatase KY998_01215 PF01497 Periplasmic binding protein KY998_01220 PF00246 Zinc carboxypeptidase KY998_01230 PF01910 Thiamine-binding protein KY998_01235 PF10958 Protein of unknown function (DUF2759) KY998_01240 PF00753 Metallo-beta-lactamase superfamily KY998_01245 PF11117 Protein of unknown function (DUF2626) KY998_01250 PF03960 ArsC family KY998_01260 PF01740 STAS domain KY998_01260 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain KY998_01265 PF00437 Type II/IV secretion system protein KY998_01270 PF00482 Type II secretion system (T2SS), protein F KY998_01275 PF07963 Prokaryotic N-terminal methylation motif KY998_01280 PF07963 Prokaryotic N-terminal methylation motif KY998_01290 PF15980 Putative Competence protein ComGF KY998_01300 PF14038 YqzE-like protein KY998_01305 PF13028 Protein of unknown function (DUF3889) KY998_01320 PF12389 Camelysin metallo-endopeptidase KY998_01325 PF08671 Anti-repressor SinI KY998_01325 PF01381 Helix-turn-helix KY998_01330 PF08671 Anti-repressor SinI KY998_01335 PF11079 Bacterial protein YqhG of unknown function KY998_01340 PF00271 Helicase conserved C-terminal domain KY998_01340 PF00176 SNF2 family N-terminal domain KY998_01345 PF01571 Aminomethyltransferase folate-binding domain KY998_01345 PF08669 Glycine cleavage T-protein C-terminal barrel domain KY998_01350 PF02347 Glycine cleavage system P-protein KY998_01355 PF02347 Glycine cleavage system P-protein KY998_01365 PF00528 Binding-protein-dependent transport system inner membrane component KY998_01370 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KY998_01375 PF00581 Rhodanese-like domain KY998_01380 PF03099 Biotin/lipoate A/B protein ligase family KY998_01385 PF01325 Iron dependent repressor, N-terminal DNA binding domain KY998_01385 PF02742 Iron dependent repressor, metal binding and dimerisation domain KY998_01390 PF01734 Patatin-like phospholipase KY998_01400 PF07136 Protein of unknown function (DUF1385) KY998_01405 PF11085 Conserved membrane protein YqhR KY998_01410 PF01220 Dehydroquinase class II KY998_01415 PF01321 Creatinase/Prolidase N-terminal domain KY998_01415 PF00557 Metallopeptidase family M24 KY998_01420 PF01132 Elongation factor P (EF-P) OB domain KY998_01420 PF08207 Elongation factor P (EF-P) KOW-like domain KY998_01420 PF09285 Elongation factor P, C-terminal KY998_01425 PF10942 Protein of unknown function (DUF2619) KY998_01435 PF09548 Stage III sporulation protein AB (spore_III_AB) KY998_01440 PF06686 Stage III sporulation protein AC/AD protein family KY998_01445 PF06686 Stage III sporulation protein AC/AD protein family KY998_01450 PF09546 Stage III sporulation protein AE (spore_III_AE) KY998_01455 PF09581 Stage III sporulation protein AF (Spore_III_AF) KY998_01465 PF12685 SpoIIIAH-like protein KY998_01470 PF00364 Biotin-requiring enzyme KY998_01475 PF02785 Biotin carboxylase C-terminal domain KY998_01475 PF00289 Biotin carboxylase, N-terminal domain KY998_01475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY998_01480 PF03780 Asp23 family, cell envelope-related function KY998_01485 PF01029 NusB family KY998_01490 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain KY998_01490 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain KY998_01495 PF02601 Exonuclease VII, large subunit KY998_01495 PF13742 OB-fold nucleic acid binding domain KY998_01500 PF02609 Exonuclease VII small subunit KY998_01505 PF00348 Polyprenyl synthetase KY998_01510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase KY998_01510 PF02779 Transketolase, pyrimidine binding domain KY998_01510 PF02780 Transketolase, C-terminal domain KY998_01515 PF01728 FtsJ-like methyltransferase KY998_01515 PF01479 S4 domain KY998_01520 PF01316 Arginine repressor, DNA binding domain KY998_01520 PF02863 Arginine repressor, C-terminal domain KY998_01525 PF13476 AAA domain KY998_01530 PF17820 PDZ domain KY998_01530 PF05580 SpoIVB peptidase S55 KY998_01535 PF08769 Sporulation initiation factor Spo0A C terminal KY998_01535 PF00072 Response regulator receiver domain KY998_01555 PF01520 N-acetylmuramoyl-L-alanine amidase KY998_01560 PF03009 Glycerophosphoryl diester phosphodiesterase family KY998_01565 PF11118 Protein of unknown function (DUF2627) KY998_01570 PF02954 Bacterial regulatory protein, Fis family KY998_01570 PF00989 PAS fold KY998_01570 PF00158 Sigma-54 interaction domain KY998_01575 PF01515 Phosphate acetyl/butaryl transferase KY998_01580 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KY998_01580 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KY998_01585 PF00871 Acetokinase family KY998_01590 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_01590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY998_01595 PF00676 Dehydrogenase E1 component KY998_01600 PF02779 Transketolase, pyrimidine binding domain KY998_01600 PF02780 Transketolase, C-terminal domain KY998_01605 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY998_01605 PF00364 Biotin-requiring enzyme KY998_01605 PF02817 e3 binding domain KY998_01610 PF00781 Diacylglycerol kinase catalytic domain KY998_01615 PF06491 Disulphide isomerase KY998_01625 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY998_01640 PF11728 Putative aromatic acid exporter C-terminal domain KY998_01640 PF06081 Aromatic acid exporter family member 1 KY998_01655 PF07687 Peptidase dimerisation domain KY998_01655 PF01546 Peptidase family M20/M25/M40 KY998_01660 PF02096 60Kd inner membrane protein KY998_01670 PF11799 impB/mucB/samB family C-terminal domain KY998_01670 PF11798 IMS family HHH motif KY998_01670 PF00817 impB/mucB/samB family KY998_01675 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KY998_01675 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY998_01685 PF00245 Alkaline phosphatase KY998_01690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_01700 PF02378 Phosphotransferase system, EIIC KY998_01705 PF00232 Glycosyl hydrolase family 1 KY998_01710 PF07702 UTRA domain KY998_01710 PF00392 Bacterial regulatory proteins, gntR family KY998_01715 PF16868 NMT1-like family KY998_01740 PF00471 Ribosomal protein L33 KY998_01750 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KY998_01755 PF01546 Peptidase family M20/M25/M40 KY998_01760 PF14748 Pyrroline-5-carboxylate reductase dimerisation KY998_01760 PF03807 NADP oxidoreductase coenzyme F420-dependent KY998_01765 PF00753 Metallo-beta-lactamase superfamily KY998_01770 PF00106 short chain dehydrogenase KY998_01775 PF05908 Poly-gamma-glutamate hydrolase KY998_01790 PF00975 Thioesterase domain KY998_01805 PF00668 Condensation domain KY998_01805 PF00550 Phosphopantetheine attachment site KY998_01805 PF13193 AMP-binding enzyme C-terminal domain KY998_01805 PF00501 AMP-binding enzyme KY998_01805 PF00975 Thioesterase domain KY998_01815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_01815 PF00512 His Kinase A (phospho-acceptor) domain KY998_01830 PF01569 PAP2 superfamily KY998_01840 PF00005 ABC transporter KY998_01850 PF00485 Phosphoribulokinase / Uridine kinase family KY998_01865 PF14164 YqzH-like protein KY998_01870 PF00817 impB/mucB/samB family KY998_01870 PF11799 impB/mucB/samB family C-terminal domain KY998_01870 PF11798 IMS family HHH motif KY998_01875 PF08863 YolD-like protein KY998_01885 PF01554 MatE KY998_01890 PF00005 ABC transporter KY998_01890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY998_01895 PF00005 ABC transporter KY998_01905 PF00528 Binding-protein-dependent transport system inner membrane component KY998_01910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_01920 PF01674 Lipase (class 2) KY998_01930 PF03992 Antibiotic biosynthesis monooxygenase KY998_01935 PF04229 GrpB protein KY998_01935 PF13673 Acetyltransferase (GNAT) domain KY998_01945 PF01521 Iron-sulphur cluster biosynthesis KY998_01950 PF10827 Protein of unknown function (DUF2552) KY998_01955 PF12146 Serine aminopeptidase, S33 KY998_01965 PF00248 Aldo/keto reductase family KY998_01970 PF13564 DoxX-like family KY998_01975 PF00440 Bacterial regulatory proteins, tetR family KY998_01985 PF00293 NUDIX domain KY998_01995 PF13673 Acetyltransferase (GNAT) domain KY998_02005 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin KY998_02010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_02015 PF02378 Phosphotransferase system, EIIC KY998_02020 PF01944 Stage II sporulation protein M KY998_02025 PF01475 Ferric uptake regulator family KY998_02030 PF14004 Protein of unknown function (DUF4227) KY998_02035 PF00589 Phage integrase family KY998_02035 PF02899 Phage integrase, N-terminal SAM-like domain KY998_02040 PF01676 Metalloenzyme superfamily KY998_02045 PF01048 Phosphorylase superfamily KY998_02050 PF00768 D-alanyl-D-alanine carboxypeptidase KY998_02050 PF07943 Penicillin-binding protein 5, C-terminal domain KY998_02055 PF01740 STAS domain KY998_02060 PF13581 Histidine kinase-like ATPase domain KY998_02065 PF04542 Sigma-70 region 2 KY998_02065 PF04545 Sigma-70, region 4 KY998_02065 PF04539 Sigma-70 region 3 KY998_02070 PF12164 Stage V sporulation protein AA KY998_02075 PF13782 Stage V sporulation protein AB KY998_02080 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KY998_02090 PF03862 SpoVAC/SpoVAEB sporulation membrane protein KY998_02095 PF14097 Stage V sporulation protein AE1 KY998_02110 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain KY998_02110 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain KY998_02115 PF05908 Poly-gamma-glutamate hydrolase KY998_02120 PF06207 Protein of unknown function (DUF1002) KY998_02125 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD KY998_02140 PF00149 Calcineurin-like phosphoesterase KY998_02150 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY998_02150 PF01872 RibD C-terminal domain KY998_02155 PF00677 Lumazine binding domain KY998_02160 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase KY998_02160 PF00925 GTP cyclohydrolase II KY998_02165 PF00885 6,7-dimethyl-8-ribityllumazine synthase KY998_02170 PF00583 Acetyltransferase (GNAT) family KY998_02180 PF03745 Domain of unknown function (DUF309) KY998_02190 PF02616 Segregation and condensation protein ScpA KY998_02195 PF04079 Segregation and condensation complex subunit ScpB KY998_02200 PF13047 Protein of unknown function (DUF3907) KY998_02205 PF07943 Penicillin-binding protein 5, C-terminal domain KY998_02205 PF00768 D-alanyl-D-alanine carboxypeptidase KY998_02215 PF07670 Nucleoside recognition KY998_02225 PF00578 AhpC/TSA family KY998_02230 PF05140 ResB-like family KY998_02240 PF00486 Transcriptional regulatory protein, C terminal KY998_02240 PF00072 Response regulator receiver domain KY998_02250 PF00072 Response regulator receiver domain KY998_02250 PF00486 Transcriptional regulatory protein, C terminal KY998_02255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_02255 PF00512 His Kinase A (phospho-acceptor) domain KY998_02270 PF03816 Cell envelope-related transcriptional attenuator domain KY998_02275 PF08281 Sigma-70, region 4 KY998_02275 PF04542 Sigma-70 region 2 KY998_02285 PF01551 Peptidase family M23 KY998_02285 PF04225 Opacity-associated protein A LysM-like domain KY998_02290 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY998_02290 PF01842 ACT domain KY998_02290 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KY998_02295 PF12822 ECF transporter, substrate-specific component KY998_02305 PF14493 Helix-turn-helix domain KY998_02310 PF00270 DEAD/DEAH box helicase KY998_02310 PF00271 Helicase conserved C-terminal domain KY998_02315 PF02517 CPBP intramembrane metalloprotease KY998_02320 PF01476 LysM domain KY998_02325 PF10864 Protein of unknown function (DUF2663) KY998_02335 PF00149 Calcineurin-like phosphoesterase KY998_02340 PF05389 Negative regulator of genetic competence (MecA) KY998_02345 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KY998_02345 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KY998_02355 PF00710 Asparaginase, N-terminal KY998_02355 PF17763 Glutaminase/Asparaginase C-terminal domain KY998_02360 PF13367 PrsW family intramembrane metalloprotease KY998_02365 PF07486 Cell Wall Hydrolase KY998_02365 PF01471 Putative peptidoglycan binding domain KY998_02370 PF03413 Peptidase propeptide and YPEB domain KY998_02370 PF14620 YpeB sporulation KY998_02375 PF17313 Family of unknown function (DUF5359) KY998_02380 PF02224 Cytidylate kinase KY998_02385 PF00575 S1 RNA binding domain KY998_02390 PF01070 FMN-dependent dehydrogenase KY998_02395 PF14140 YpzI-like protein KY998_02405 PF14045 YIEGIA protein KY998_02415 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal KY998_02415 PF01926 50S ribosome-binding GTPase KY998_02420 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus KY998_02420 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus KY998_02425 PF10966 Protein of unknown function (DUF2768) KY998_02435 PF09547 Stage IV sporulation protein A (spore_IV_A) KY998_02440 PF00216 Bacterial DNA-binding protein KY998_02445 PF01227 GTP cyclohydrolase I KY998_02450 PF02081 Tryptophan RNA-binding attenuator protein KY998_02455 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 KY998_02460 PF01209 ubiE/COQ5 methyltransferase family KY998_02465 PF00348 Polyprenyl synthetase KY998_02470 PF00334 Nucleoside diphosphate kinase KY998_02475 PF01739 CheR methyltransferase, SAM binding domain KY998_02475 PF03705 CheR methyltransferase, all-alpha domain KY998_02480 PF01264 Chorismate synthase KY998_02485 PF01761 3-dehydroquinate synthase KY998_02490 PF07736 Chorismate mutase type I KY998_02500 PF02885 Glycosyl transferase family, helical bundle domain KY998_02500 PF00591 Glycosyl transferase family, a/b domain KY998_02505 PF00218 Indole-3-glycerol phosphate synthase KY998_02510 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase KY998_02515 PF00291 Pyridoxal-phosphate dependent enzyme KY998_02520 PF00290 Tryptophan synthase alpha chain KY998_02525 PF00155 Aminotransferase class I and II KY998_02530 PF01842 ACT domain KY998_02530 PF02153 Prephenate dehydrogenase KY998_02535 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY998_02545 PF08858 IDEAL domain KY998_02545 PF08864 UPF0302 domain KY998_02550 PF10673 Protein of unknown function (DUF2487) KY998_02555 PF00355 Rieske [2Fe-2S] domain KY998_02560 PF00033 Cytochrome b/b6/petB KY998_02565 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KY998_02565 PF00032 Cytochrome b(C-terminal)/b6/petD KY998_02575 PF07187 Protein of unknown function (DUF1405) KY998_02580 PF09577 Sporulation protein YpjB (SpoYpjB) KY998_02585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_02585 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_02590 PF03819 MazG nucleotide pyrophosphohydrolase domain KY998_02595 PF05173 Dihydrodipicolinate reductase, C-terminus KY998_02595 PF01113 Dihydrodipicolinate reductase, N-terminus KY998_02600 PF02142 MGS-like domain KY998_02605 PF02585 GlcNAc-PI de-N-acetylase KY998_02610 PF13439 Glycosyltransferase Family 4 KY998_02610 PF00534 Glycosyl transferases group 1 KY998_02615 PF01743 Poly A polymerase head domain KY998_02615 PF12627 Probable RNA and SrmB- binding site of polymerase A KY998_02615 PF13735 tRNA nucleotidyltransferase domain 2 putative KY998_02620 PF02237 Biotin protein ligase C terminal domain KY998_02620 PF03099 Biotin/lipoate A/B protein ligase family KY998_02620 PF08279 HTH domain KY998_02625 PF02548 Ketopantoate hydroxymethyltransferase KY998_02630 PF02569 Pantoate-beta-alanine ligase KY998_02635 PF02261 Aspartate decarboxylase KY998_02640 PF00929 Exonuclease KY998_02640 PF04851 Type III restriction enzyme, res subunit KY998_02640 PF13307 Helicase C-terminal domain KY998_02645 PF14084 Protein of unknown function (DUF4264) KY998_02650 PF17881 Domain of unknown function (DUF5590) KY998_02650 PF03413 Peptidase propeptide and YPEB domain KY998_02655 PF00155 Aminotransferase class I and II KY998_02660 PF00152 tRNA synthetases class II (D, K and N) KY998_02660 PF01336 OB-fold nucleic acid binding domain KY998_02665 PF07261 Replication initiation and membrane attachment KY998_02670 PF10576 Iron-sulfur binding domain of endonuclease III KY998_02670 PF00633 Helix-hairpin-helix motif KY998_02670 PF00730 HhH-GPD superfamily base excision DNA repair protein KY998_02680 PF00905 Penicillin binding protein transpeptidase domain KY998_02680 PF00912 Transglycosylase KY998_02685 PF03838 Recombination protein U KY998_02690 PF10720 Protein of unknown function (DUF2515) KY998_02705 PF08807 Bacterial domain of unknown function (DUF1798) KY998_02710 PF14178 YppF-like protein KY998_02725 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY998_02730 PF00271 Helicase conserved C-terminal domain KY998_02730 PF09369 Domain of unknown function (DUF1998) KY998_02730 PF00270 DEAD/DEAH box helicase KY998_02735 PF13482 RNase_H superfamily KY998_02740 PF11122 Inner spore coat protein D KY998_02745 PF06908 YspA SLOG family KY998_02750 PF05103 DivIVA protein KY998_02760 PF02926 THUMP domain KY998_02760 PF01170 Putative RNA methylase family UPF0020 KY998_02775 PF13307 Helicase C-terminal domain KY998_02780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase KY998_02785 PF00156 Phosphoribosyl transferase domain KY998_02790 PF00860 Permease family KY998_02800 PF02797 Chalcone and stilbene synthases, C-terminal domain KY998_02800 PF00195 Chalcone and stilbene synthases, N-terminal domain KY998_02805 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family KY998_02815 PF00350 Dynamin family KY998_02820 PF10752 Protein of unknown function (DUF2533) KY998_02840 PF13456 Reverse transcriptase-like KY998_02845 PF02592 Putative vitamin uptake transporter KY998_02850 PF13456 Reverse transcriptase-like KY998_02855 PF10782 Zinc-finger KY998_02860 PF10819 Protein of unknown function (DUF2564) KY998_02870 PF00313 'Cold-shock' DNA-binding domain KY998_02880 PF00534 Glycosyl transferases group 1 KY998_02880 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KY998_02885 PF04204 Homoserine O-succinyltransferase KY998_02890 PF01268 Formate--tetrahydrofolate ligase KY998_02895 PF00255 Glutathione peroxidase KY998_02900 PF01966 HD domain KY998_02910 PF00920 Dehydratase family KY998_02915 PF06491 Disulphide isomerase KY998_02920 PF04445 Putative SAM-dependent methyltransferase KY998_02925 PF14005 YpjP-like protein KY998_02930 PF04608 Phosphatidylglycerophosphatase A KY998_02935 PF00186 Dihydrofolate reductase KY998_02945 PF03006 Haemolysin-III related KY998_02960 PF10751 Protein of unknown function (DUF2535) KY998_02965 PF02645 Uncharacterised protein, DegV family COG1307 KY998_02970 PF02630 SCO1/SenC KY998_02975 PF13472 GDSL-like Lipase/Acylhydrolase family KY998_02980 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) KY998_02985 PF17431 Uncharacterized YmpT-like KY998_02995 PF01554 MatE KY998_03000 PF07694 5TMR of 5TMR-LYT KY998_03000 PF00990 Diguanylate cyclase, GGDEF domain KY998_03010 PF01047 MarR family KY998_03015 PF01625 Peptide methionine sulfoxide reductase KY998_03020 PF01641 SelR domain KY998_03025 PF00583 Acetyltransferase (GNAT) family KY998_03040 PF00202 Aminotransferase class-III KY998_03045 PF01144 Coenzyme A transferase KY998_03050 PF01144 Coenzyme A transferase KY998_03055 PF01546 Peptidase family M20/M25/M40 KY998_03055 PF07687 Peptidase dimerisation domain KY998_03060 PF00583 Acetyltransferase (GNAT) family KY998_03065 PF12544 Lysine-2,3-aminomutase KY998_03070 PF14122 YokU-like protein, putative antitoxin KY998_03075 PF06855 YozE SAM-like fold KY998_03085 PF14162 YozD-like protein KY998_03090 PF01569 PAP2 superfamily KY998_03095 PF14191 YodL-like KY998_03110 PF03773 Predicted permease KY998_03115 PF01048 Phosphorylase superfamily KY998_03120 PF02557 D-alanyl-D-alanine carboxypeptidase KY998_03130 PF08241 Methyltransferase domain KY998_03140 PF00474 Sodium:solute symporter family KY998_03145 PF11755 Protein of unknown function (DUF3311) KY998_03150 PF01738 Dienelactone hydrolase family KY998_03155 PF00881 Nitroreductase family KY998_03160 PF01638 HxlR-like helix-turn-helix KY998_03175 PF03330 Lytic transglycolase KY998_03185 PF00892 EamA-like transporter family KY998_03195 PF08830 Protein of unknown function (DUF1806) KY998_03200 PF02585 GlcNAc-PI de-N-acetylase KY998_03205 PF01554 MatE KY998_03210 PF01476 LysM domain KY998_03210 PF00877 NlpC/P60 family KY998_03215 PF13627 Prokaryotic lipoprotein-attachment site KY998_03215 PF00080 Copper/zinc superoxide dismutase (SODC) KY998_03220 PF07728 AAA domain (dynein-related subfamily) KY998_03225 PF00092 von Willebrand factor type A domain KY998_03230 PF16870 2-oxoglutarate dehydrogenase C-terminal KY998_03230 PF02779 Transketolase, pyrimidine binding domain KY998_03230 PF00676 Dehydrogenase E1 component KY998_03235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY998_03235 PF00364 Biotin-requiring enzyme KY998_03235 PF02817 e3 binding domain KY998_03240 PF01758 Sodium Bile acid symporter family KY998_03255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain KY998_03255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain KY998_03260 PF13249 Squalene-hopene cyclase N-terminal domain KY998_03260 PF13243 Squalene-hopene cyclase C-terminal domain KY998_03270 PF01636 Phosphotransferase enzyme family KY998_03275 PF07690 Major Facilitator Superfamily KY998_03280 PF00171 Aldehyde dehydrogenase family KY998_03290 PF08000 Bacterial PH domain KY998_03295 PF01258 Prokaryotic dksA/traR C4-type zinc finger KY998_03310 PF00144 Beta-lactamase KY998_03315 PF02525 Flavodoxin-like fold KY998_03320 PF05163 DinB family KY998_03325 PF10710 Protein of unknown function (DUF2512) KY998_03340 PF00391 PEP-utilising enzyme, mobile domain KY998_03340 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KY998_03350 PF00253 Ribosomal protein S14p/S29e KY998_03355 PF01810 LysE type translocator KY998_03360 PF11122 Inner spore coat protein D KY998_03370 PF00561 alpha/beta hydrolase fold KY998_03370 PF08386 TAP-like protein KY998_03380 PF11122 Inner spore coat protein D KY998_03385 PF01979 Amidohydrolase family KY998_03405 PF03795 YCII-related domain KY998_03410 PF13217 Protein of unknown function (DUF4025) KY998_03440 PF07317 Flagellar regulator YcgR KY998_03440 PF07238 PilZ domain KY998_03455 PF04740 LXG domain of WXG superfamily KY998_03455 PF14449 Pre-toxin TG KY998_03465 PF14172 Domain of unknown function (DUF4309) KY998_03470 PF01568 Molydopterin dinucleotide binding domain KY998_03470 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region KY998_03470 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KY998_03470 PF12838 4Fe-4S dicluster domain KY998_03470 PF00384 Molybdopterin oxidoreductase KY998_03485 PF04237 YjbR KY998_03510 PF00270 DEAD/DEAH box helicase KY998_03510 PF00271 Helicase conserved C-terminal domain KY998_03510 PF00570 HRDC domain KY998_03510 PF16124 RecQ zinc-binding KY998_03510 PF09382 RQC domain KY998_03520 PF00474 Sodium:solute symporter family KY998_03525 PF02016 LD-carboxypeptidase N-terminal domain KY998_03525 PF17676 LD-carboxypeptidase C-terminal domain KY998_03540 PF04238 Protein of unknown function (DUF420) KY998_03545 PF00534 Glycosyl transferases group 1 KY998_03560 PF02719 Polysaccharide biosynthesis protein KY998_03570 PF00324 Amino acid permease KY998_03585 PF01022 Bacterial regulatory protein, arsR family KY998_03595 PF13280 WYL domain KY998_03595 PF08279 HTH domain KY998_03610 PF00753 Metallo-beta-lactamase superfamily KY998_03615 PF13305 Tetracyclin repressor-like, C-terminal domain KY998_03615 PF00440 Bacterial regulatory proteins, tetR family KY998_03625 PF13761 Domain of unknown function (DUF4166) KY998_03630 PF14158 YndJ-like protein KY998_03640 PF01966 HD domain KY998_03645 PF01047 MarR family KY998_03650 PF00440 Bacterial regulatory proteins, tetR family KY998_03650 PF17932 Tetracyclin repressor-like, C-terminal domain KY998_03655 PF17329 Family of unknown function (DUF5367) KY998_03665 PF01588 Putative tRNA binding domain KY998_03680 PF03323 Bacillus/Clostridium GerA spore germination protein KY998_03685 PF03845 Spore germination protein KY998_03690 PF05504 Spore germination B3/ GerAC like, C-terminal KY998_03700 PF07690 Major Facilitator Superfamily KY998_03705 PF01047 MarR family KY998_03710 PF04879 Molybdopterin oxidoreductase Fe4S4 domain KY998_03710 PF00384 Molybdopterin oxidoreductase KY998_03710 PF01568 Molydopterin dinucleotide binding domain KY998_03715 PF07690 Major Facilitator Superfamily KY998_03720 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain KY998_03720 PF00391 PEP-utilising enzyme, mobile domain KY998_03735 PF00005 ABC transporter KY998_03735 PF00664 ABC transporter transmembrane region KY998_03770 PF01645 Conserved region in glutamate synthase KY998_03770 PF04898 Glutamate synthase central domain KY998_03770 PF00310 Glutamine amidotransferases class-II KY998_03770 PF01493 GXGXG motif KY998_03775 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster KY998_03775 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_03790 PF00535 Glycosyl transferase family 2 KY998_03795 PF07690 Major Facilitator Superfamily KY998_03800 PF13378 Enolase C-terminal domain-like KY998_03800 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KY998_03810 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) KY998_03815 PF01507 Phosphoadenosine phosphosulfate reductase family KY998_03830 PF04239 Protein of unknown function (DUF421) KY998_03835 PF03807 NADP oxidoreductase coenzyme F420-dependent KY998_03835 PF14748 Pyrroline-5-carboxylate reductase dimerisation KY998_03850 PF01638 HxlR-like helix-turn-helix KY998_03860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY998_03860 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_03860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_03865 PF13193 AMP-binding enzyme C-terminal domain KY998_03865 PF00501 AMP-binding enzyme KY998_03895 PF02785 Biotin carboxylase C-terminal domain KY998_03895 PF00289 Biotin carboxylase, N-terminal domain KY998_03895 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY998_03900 PF00364 Biotin-requiring enzyme KY998_03905 PF00682 HMGL-like KY998_03915 PF01039 Carboxyl transferase domain KY998_03930 PF12728 Helix-turn-helix domain KY998_03935 PF07849 Protein of unknown function (DUF1641) KY998_03940 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_03945 PF00440 Bacterial regulatory proteins, tetR family KY998_03945 PF17932 Tetracyclin repressor-like, C-terminal domain KY998_03955 PF00005 ABC transporter KY998_03975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family KY998_03980 PF02901 Pyruvate formate lyase-like KY998_03980 PF01228 Glycine radical KY998_03985 PF04055 Radical SAM superfamily KY998_04000 PF06800 Sugar transport protein KY998_04010 PF08818 Domain of unknown function (DU1801) KY998_04015 PF01022 Bacterial regulatory protein, arsR family KY998_04020 PF02040 Arsenical pump membrane protein KY998_04025 PF01451 Low molecular weight phosphotyrosine protein phosphatase KY998_04035 PF03480 Bacterial extracellular solute-binding protein, family 7 KY998_04040 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component KY998_04045 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component KY998_04050 PF17137 Domain of unknown function (DUF5110) KY998_04050 PF13802 Galactose mutarotase-like KY998_04050 PF01055 Glycosyl hydrolases family 31 KY998_04050 PF16338 Domain of unknown function (DUF4968) KY998_04055 PF03786 D-mannonate dehydratase (UxuA) KY998_04060 PF00106 short chain dehydrogenase KY998_04065 PF00392 Bacterial regulatory proteins, gntR family KY998_04070 PF00005 ABC transporter KY998_04095 PF02378 Phosphotransferase system, EIIC KY998_04095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_04095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_04100 PF01238 Phosphomannose isomerase type I KY998_04105 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_04105 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_04105 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY998_04110 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase KY998_04110 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY998_04120 PF00378 Enoyl-CoA hydratase/isomerase KY998_04140 PF12706 Beta-lactamase superfamily domain KY998_04150 PF05525 Branched-chain amino acid transport protein KY998_04155 PF13229 Right handed beta helix region KY998_04180 PF13302 Acetyltransferase (GNAT) domain KY998_04185 PF17452 Uncharacterized YnfE-like KY998_04190 PF00942 Cellulose binding domain KY998_04190 PF00150 Cellulase (glycosyl hydrolase family 5) KY998_04195 PF07098 Protein of unknown function (DUF1360) KY998_04200 PF01814 Hemerythrin HHE cation binding domain KY998_04200 PF04405 Domain of Unknown function (DUF542) KY998_04205 PF00115 Cytochrome C and Quinol oxidase polypeptide I KY998_04210 PF00027 Cyclic nucleotide-binding domain KY998_04210 PF13545 Crp-like helix-turn-helix domain KY998_04220 PF07690 Major Facilitator Superfamily KY998_04225 PF00027 Cyclic nucleotide-binding domain KY998_04225 PF00325 Bacterial regulatory proteins, crp family KY998_04230 PF14256 YwiC-like protein KY998_04240 PF04055 Radical SAM superfamily KY998_04240 PF13186 Iron-sulfur cluster-binding domain KY998_04255 PF14710 Respiratory nitrate reductase alpha N-terminal KY998_04255 PF01568 Molydopterin dinucleotide binding domain KY998_04255 PF00384 Molybdopterin oxidoreductase KY998_04260 PF14711 Respiratory nitrate reductase beta C-terminal KY998_04260 PF13247 4Fe-4S dicluster domain KY998_04265 PF02613 Nitrate reductase delta subunit KY998_04270 PF02665 Nitrate reductase gamma subunit KY998_04290 PF00106 short chain dehydrogenase KY998_04295 PF00083 Sugar (and other) transporter KY998_04300 PF02610 L-arabinose isomerase KY998_04300 PF11762 L-arabinose isomerase C-terminal domain KY998_04305 PF00596 Class II Aldolase and Adducin N-terminal domain KY998_04315 PF00392 Bacterial regulatory proteins, gntR family KY998_04320 PF03989 DNA gyrase C-terminal domain, beta-propeller KY998_04320 PF00521 DNA gyrase/topoisomerase IV, subunit A KY998_04325 PF00204 DNA gyrase B KY998_04325 PF01751 Toprim domain KY998_04325 PF00986 DNA gyrase B subunit, carboxyl terminus KY998_04325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_04330 PF13380 CoA binding domain KY998_04335 PF02660 Glycerol-3-phosphate acyltransferase KY998_04340 PF01521 Iron-sulphur cluster biosynthesis KY998_04360 PF03061 Thioesterase superfamily KY998_04370 PF08177 Small acid-soluble spore protein N family KY998_04375 PF13040 Fur-regulated basic protein B KY998_04380 PF00578 AhpC/TSA family KY998_04385 PF00694 Aconitase C-terminal domain KY998_04385 PF00330 Aconitase family (aconitate hydratase) KY998_04395 PF08179 Small acid-soluble spore protein P family KY998_04405 PF11084 Protein of unknown function (DUF2621) KY998_04410 PF07301 Protein of unknown function (DUF1453) KY998_04415 PF00072 Response regulator receiver domain KY998_04420 PF02683 Cytochrome C biogenesis protein transmembrane region KY998_04425 PF09388 Spo0E like sporulation regulatory protein KY998_04430 PF03672 Uncharacterised protein family (UPF0154) KY998_04435 PF10747 Sporulation inhibitor of replication protein SirA KY998_04440 PF02780 Transketolase, C-terminal domain KY998_04440 PF00456 Transketolase, thiamine diphosphate binding domain KY998_04440 PF02779 Transketolase, pyrimidine binding domain KY998_04445 PF05979 Bacterial protein of unknown function (DUF896) KY998_04450 PF00239 Resolvase, N terminal domain KY998_04455 PF01476 LysM domain KY998_04460 PF01726 LexA DNA binding domain KY998_04460 PF00717 Peptidase S24-like KY998_04465 PF14040 Deoxyribonuclease NucA/NucB KY998_04470 PF00303 Thymidylate synthase KY998_04490 PF03358 NADPH-dependent FMN reductase KY998_04495 PF01613 Flavin reductase like domain KY998_04500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_04505 PF01047 MarR family KY998_04510 PF08360 QacR-like protein, C-terminal region KY998_04510 PF00440 Bacterial regulatory proteins, tetR family KY998_04535 PF00578 AhpC/TSA family KY998_04550 PF13302 Acetyltransferase (GNAT) domain KY998_04555 PF00893 Small Multidrug Resistance protein KY998_04560 PF00893 Small Multidrug Resistance protein KY998_04565 PF17934 Tetracyclin repressor-like, C-terminal domain KY998_04565 PF00440 Bacterial regulatory proteins, tetR family KY998_04590 PF16302 Domain of unknown function (DUF4944) KY998_04610 PF00999 Sodium/hydrogen exchanger family KY998_04615 PF02080 TrkA-C domain KY998_04660 PF00120 Glutamine synthetase, catalytic domain KY998_04660 PF03951 Glutamine synthetase, beta-Grasp domain KY998_04665 PF13411 MerR HTH family regulatory protein KY998_04670 PF06838 Methionine gamma-lyase KY998_04675 PF16360 GTP-binding GTPase Middle Region KY998_04675 PF13167 GTP-binding GTPase N-terminal KY998_04675 PF01926 50S ribosome-binding GTPase KY998_04705 PF08719 Domain of unknown function (DUF1768) KY998_04725 PF00149 Calcineurin-like phosphoesterase KY998_04730 PF00269 Small, acid-soluble spore proteins, alpha/beta type KY998_04750 PF00303 Thymidylate synthase KY998_04770 PF00692 dUTPase KY998_04780 PF00085 Thioredoxin KY998_04785 PF00268 Ribonucleotide reductase, small chain KY998_04805 PF07972 NrdI Flavodoxin like KY998_04880 PF06725 3D domain KY998_04905 PF01368 DHH family KY998_04905 PF17768 RecJ OB domain KY998_04970 PF09643 YopX protein KY998_04985 PF01068 ATP dependent DNA ligase domain KY998_05025 PF06908 YspA SLOG family KY998_05030 PF13538 UvrD-like helicase C-terminal domain KY998_05030 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain KY998_05030 PF14490 Helix-hairpin-helix containing domain KY998_05065 PF14072 DNA-sulfur modification-associated KY998_05070 PF00589 Phage integrase family KY998_05070 PF02899 Phage integrase, N-terminal SAM-like domain KY998_05100 PF00082 Subtilase family KY998_05145 PF08808 RES domain KY998_05170 PF13443 Cro/C1-type HTH DNA-binding domain KY998_05255 PF05922 Peptidase inhibitor I9 KY998_05255 PF00082 Subtilase family KY998_05265 PF10049 Protein of unknown function (DUF2283) KY998_05285 PF00216 Bacterial DNA-binding protein KY998_05325 PF03237 Terminase-like family KY998_05415 PF00589 Phage integrase family KY998_05415 PF13495 Phage integrase, N-terminal SAM-like domain KY998_05475 PF01464 Transglycosylase SLT domain KY998_05475 PF10145 Phage-related minor tail protein KY998_05475 PF01551 Peptidase family M23 KY998_05490 PF05709 Phage tail protein KY998_05495 PF06605 Prophage endopeptidase tail KY998_05505 PF12708 Pectate lyase superfamily protein KY998_05505 PF13229 Right handed beta helix region KY998_05505 PF04650 YSIRK type signal peptide KY998_05510 PF01510 N-acetylmuramoyl-L-alanine amidase KY998_05535 PF18801 response regulator aspartate phosphatase H, N terminal KY998_05580 PF09346 SMI1 / KNR4 family (SUKH-1) KY998_05615 PF10400 Virulence activator alpha C-term KY998_05615 PF03551 Transcriptional regulator PadR-like family KY998_05620 PF13386 Cytochrome C biogenesis protein transmembrane region KY998_05625 PF01774 UreD urease accessory protein KY998_05630 PF02492 CobW/HypB/UreG, nucleotide-binding domain KY998_05635 PF01730 UreF KY998_05640 PF02814 UreE urease accessory protein, N-terminal domain KY998_05640 PF05194 UreE urease accessory protein, C-terminal domain KY998_05645 PF00449 Urease alpha-subunit, N-terminal domain KY998_05645 PF01979 Amidohydrolase family KY998_05650 PF00699 Urease beta subunit KY998_05655 PF00547 Urease, gamma subunit KY998_05660 PF03253 Urea transporter KY998_05670 PF18801 response regulator aspartate phosphatase H, N terminal KY998_05675 PF07690 Major Facilitator Superfamily KY998_05725 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH KY998_05725 PF04740 LXG domain of WXG superfamily KY998_05730 PF09346 SMI1 / KNR4 family (SUKH-1) KY998_05750 PF05378 Hydantoinase/oxoprolinase N-terminal region KY998_05750 PF01968 Hydantoinase/oxoprolinase KY998_05765 PF00440 Bacterial regulatory proteins, tetR family KY998_05765 PF17934 Tetracyclin repressor-like, C-terminal domain KY998_05795 PF01520 N-acetylmuramoyl-L-alanine amidase KY998_05795 PF05036 Sporulation related domain KY998_05800 PF13536 Putative multidrug resistance efflux transporter KY998_05810 PF01475 Ferric uptake regulator family KY998_05815 PF01592 NifU-like N terminal domain KY998_05820 PF00753 Metallo-beta-lactamase superfamily KY998_05830 PF00268 Ribonucleotide reductase, small chain KY998_05835 PF02867 Ribonucleotide reductase, barrel domain KY998_05835 PF08343 Ribonucleotide reductase N-terminal KY998_05835 PF00317 Ribonucleotide reductase, all-alpha domain KY998_05840 PF07972 NrdI Flavodoxin like KY998_05850 PF17209 Hfq protein KY998_05860 PF12788 YmaF family KY998_05870 PF00893 Small Multidrug Resistance protein KY998_05875 PF00893 Small Multidrug Resistance protein KY998_05880 PF02566 OsmC-like protein KY998_05890 PF01370 NAD dependent epimerase/dehydratase family KY998_05895 PF12680 SnoaL-like domain KY998_05900 PF00440 Bacterial regulatory proteins, tetR family KY998_05905 PF00704 Glycosyl hydrolases family 18 KY998_05905 PF01476 LysM domain KY998_05915 PF07875 Coat F domain KY998_05920 PF13520 Amino acid permease KY998_05925 PF04101 Glycosyltransferase family 28 C-terminal domain KY998_05930 PF11954 Domain of unknown function (DUF3471) KY998_05930 PF00144 Beta-lactamase KY998_05935 PF09335 SNARE associated Golgi protein KY998_05940 PF01906 Putative heavy-metal-binding KY998_05960 PF00561 alpha/beta hydrolase fold KY998_05965 PF07690 Major Facilitator Superfamily KY998_05970 PF02080 TrkA-C domain KY998_05970 PF00999 Sodium/hydrogen exchanger family KY998_05970 PF03471 Transporter associated domain KY998_05975 PF06912 Protein of unknown function (DUF1275) KY998_05980 PF01593 Flavin containing amine oxidoreductase KY998_06010 PF02492 CobW/HypB/UreG, nucleotide-binding domain KY998_06010 PF07683 Cobalamin synthesis protein cobW C-terminal domain KY998_06055 PF03992 Antibiotic biosynthesis monooxygenase KY998_06060 PF01119 DNA mismatch repair protein, C-terminal domain KY998_06060 PF08676 MutL C terminal dimerisation domain KY998_06065 PF01624 MutS domain I KY998_06065 PF05188 MutS domain II KY998_06065 PF05192 MutS domain III KY998_06065 PF05190 MutS family domain IV KY998_06065 PF00488 MutS domain V KY998_06070 PF10628 Outer spore coat protein E (CotE) KY998_06075 PF06133 Control of competence regulator ComK, YlbF/YmcA KY998_06080 PF00919 Uncharacterized protein family UPF0004 KY998_06080 PF04055 Radical SAM superfamily KY998_06080 PF01938 TRAM domain KY998_06085 PF00155 Aminotransferase class I and II KY998_06090 PF08240 Alcohol dehydrogenase GroES-like domain KY998_06090 PF00107 Zinc-binding dehydrogenase KY998_06095 PF01244 Membrane dipeptidase (Peptidase family M19) KY998_06100 PF04232 Stage V sporulation protein S (SpoVS) KY998_06105 PF13277 YmdB-like protein KY998_06110 PF01966 HD domain KY998_06110 PF00013 KH domain KY998_06110 PF12072 Domain of unknown function (DUF3552) KY998_06115 PF00154 recA bacterial DNA recombination protein KY998_06120 PF00994 Probable molybdopterin binding domain KY998_06120 PF02464 Competence-damaged protein KY998_06120 PF18146 Damage-inducible protein CinA KH domain KY998_06125 PF01066 CDP-alcohol phosphatidyltransferase KY998_06130 PF13464 Domain of unknown function (DUF4115) KY998_06135 PF11868 Protein of unknown function (DUF3388) KY998_06140 PF11588 Protein of unknown function (DUF3243) KY998_06150 PF00675 Insulinase (Peptidase family M16) KY998_06150 PF05193 Peptidase M16 inactive domain KY998_06155 PF05193 Peptidase M16 inactive domain KY998_06165 PF00392 Bacterial regulatory proteins, gntR family KY998_06165 PF07702 UTRA domain KY998_06170 PF17854 FtsK alpha domain KY998_06170 PF09397 Ftsk gamma domain KY998_06170 PF01580 FtsK/SpoIIIE family KY998_06175 PF14035 YlzJ-like protein KY998_06180 PF00574 Clp protease KY998_06185 PF17770 Ribonuclease J C-terminal domain KY998_06185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KY998_06185 PF00753 Metallo-beta-lactamase superfamily KY998_06190 PF00701 Dihydrodipicolinate synthetase family KY998_06195 PF00696 Amino acid kinase family KY998_06195 PF13840 ACT domain KY998_06200 PF01118 Semialdehyde dehydrogenase, NAD binding domain KY998_06200 PF02774 Semialdehyde dehydrogenase, dimerisation domain KY998_06205 PF02441 Flavoprotein KY998_06210 PF16924 Dipicolinate synthase subunit A N-terminal domain KY998_06210 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KY998_06215 PF05239 PRC-barrel domain KY998_06220 PF05193 Peptidase M16 inactive domain KY998_06220 PF00675 Insulinase (Peptidase family M16) KY998_06235 PF00312 Ribosomal protein S15 KY998_06240 PF06574 FAD synthetase KY998_06240 PF01687 Riboflavin kinase KY998_06245 PF16198 tRNA pseudouridylate synthase B C-terminal domain KY998_06245 PF01509 TruB family pseudouridylate synthase (N terminal domain) KY998_06250 PF02033 Ribosome-binding factor A KY998_06255 PF04456 Protein of unknown function (DUF503) KY998_06260 PF04760 Translation initiation factor IF-2, N-terminal region KY998_06260 PF00009 Elongation factor Tu GTP binding domain KY998_06260 PF11987 Translation-initiation factor 2 KY998_06265 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KY998_06270 PF04296 Protein of unknown function (DUF448) KY998_06275 PF08529 NusA N-terminal domain KY998_06275 PF00575 S1 RNA binding domain KY998_06275 PF13184 NusA-like KH domain KY998_06280 PF02576 RimP N-terminal domain KY998_06280 PF17384 RimP C-terminal SH3 domain KY998_06290 PF18448 Carbohydrate binding domain KY998_06290 PF03442 Carbohydrate binding domain X2 KY998_06290 PF00150 Cellulase (glycosyl hydrolase family 5) KY998_06295 PF02011 Glycosyl hydrolase family 48 KY998_06295 PF00759 Glycosyl hydrolase family 9 KY998_06295 PF00942 Cellulose binding domain KY998_06300 PF00942 Cellulose binding domain KY998_06300 PF00759 Glycosyl hydrolase family 9 KY998_06305 PF00929 Exonuclease KY998_06305 PF14579 Helix-hairpin-helix motif KY998_06305 PF02811 PHP domain KY998_06305 PF07733 Bacterial DNA polymerase III alpha NTPase domain KY998_06305 PF11490 DNA polymerase III polC-type N-terminus II KY998_06305 PF14480 DNA polymerase III polC-type N-terminus I KY998_06305 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KY998_06310 PF03129 Anticodon binding domain KY998_06310 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY998_06310 PF04073 Aminoacyl-tRNA editing domain KY998_06315 PF17820 PDZ domain KY998_06315 PF02163 Peptidase family M50 KY998_06320 PF13288 DXP reductoisomerase C-terminal domain KY998_06320 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain KY998_06320 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase KY998_06330 PF01255 Putative undecaprenyl diphosphate synthase KY998_06335 PF01765 Ribosome recycling factor KY998_06340 PF00696 Amino acid kinase family KY998_06345 PF00889 Elongation factor TS KY998_06350 PF00318 Ribosomal protein S2 KY998_06360 PF04542 Sigma-70 region 2 KY998_06360 PF04539 Sigma-70 region 3 KY998_06360 PF04545 Sigma-70, region 4 KY998_06365 PF03975 CheD chemotactic sensory transduction KY998_06370 PF04509 CheC-like family KY998_06375 PF01584 CheW-like domain KY998_06380 PF07194 P2 response regulator binding domain KY998_06380 PF01627 Hpt domain KY998_06380 PF02895 Signal transducing histidine kinase, homodimeric domain KY998_06380 PF01584 CheW-like domain KY998_06380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_06385 PF01339 CheB methylesterase KY998_06385 PF00072 Response regulator receiver domain KY998_06390 PF10609 NUBPL iron-transfer P-loop NTPase KY998_06395 PF00448 SRP54-type protein, GTPase domain KY998_06400 PF00771 FHIPEP family KY998_06405 PF01312 FlhB HrpN YscU SpaS Family KY998_06410 PF01311 Bacterial export proteins, family 1 KY998_06415 PF01313 Bacterial export proteins, family 3 KY998_06420 PF00813 FliP family KY998_06425 PF04347 Flagellar biosynthesis protein, FliO KY998_06430 PF00072 Response regulator receiver domain KY998_06435 PF04509 CheC-like family KY998_06435 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KY998_06440 PF02154 Flagellar motor switch protein FliM KY998_06440 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term KY998_06445 PF03748 Flagellar basal body-associated protein FliL KY998_06450 PF06289 Flagellar and Swarming motility proteins KY998_06455 PF00460 Flagella basal body rod protein KY998_06455 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY998_06460 PF03963 Flagellar hook capping protein - N-terminal region KY998_06465 PF02120 Flagellar hook-length control protein FliK KY998_06475 PF02050 Flagellar FliJ protein KY998_06480 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY998_06480 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY998_06480 PF18269 T3SS EscN ATPase C-terminal domain KY998_06485 PF02108 Flagellar assembly protein FliH KY998_06490 PF01706 FliG C-terminal domain KY998_06490 PF14841 FliG middle domain KY998_06490 PF14842 FliG N-terminal domain KY998_06495 PF01514 Secretory protein of YscJ/FliF family KY998_06495 PF08345 Flagellar M-ring protein C-terminal KY998_06500 PF02049 Flagellar hook-basal body complex protein FliE KY998_06505 PF00460 Flagella basal body rod protein KY998_06505 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY998_06510 PF00460 Flagella basal body rod protein KY998_06515 PF06018 CodY GAF-like domain KY998_06515 PF08222 CodY helix-turn-helix domain KY998_06520 PF00004 ATPase family associated with various cellular activities (AAA) KY998_06520 PF10431 C-terminal, D2-small domain, of ClpB protein KY998_06520 PF07724 AAA domain (Cdc48 subfamily) KY998_06525 PF00227 Proteasome subunit KY998_06530 PF02899 Phage integrase, N-terminal SAM-like domain KY998_06530 PF00589 Phage integrase family KY998_06535 PF01134 Glucose inhibited division protein A KY998_06540 PF01131 DNA topoisomerase KY998_06540 PF01751 Toprim domain KY998_06540 PF01396 Topoisomerase DNA binding C4 zinc finger KY998_06545 PF02481 DNA recombination-mediator protein A KY998_06550 PF02629 CoA binding domain KY998_06550 PF00549 CoA-ligase KY998_06555 PF08442 ATP-grasp domain KY998_06555 PF00549 CoA-ligase KY998_06560 PF01312 FlhB HrpN YscU SpaS Family KY998_06570 PF01351 Ribonuclease HII KY998_06575 PF01926 50S ribosome-binding GTPase KY998_06580 PF01245 Ribosomal protein L19 KY998_06585 PF01746 tRNA (Guanine-1)-methyltransferase KY998_06590 PF01782 RimM N-terminal domain KY998_06590 PF05239 PRC-barrel domain KY998_06595 PF11068 YlqD protein KY998_06605 PF00886 Ribosomal protein S16 KY998_06610 PF00448 SRP54-type protein, GTPase domain KY998_06610 PF02881 SRP54-type protein, helical bundle domain KY998_06610 PF02978 Signal peptide binding domain KY998_06615 PF04297 Putative helix-turn-helix protein, YlxM / p13 like KY998_06620 PF00448 SRP54-type protein, GTPase domain KY998_06620 PF02881 SRP54-type protein, helical bundle domain KY998_06625 PF02463 RecF/RecN/SMC N terminal domain KY998_06625 PF06470 SMC proteins Flexible Hinge Domain KY998_06630 PF00035 Double-stranded RNA binding motif KY998_06630 PF14622 Ribonuclease-III-like KY998_06635 PF00550 Phosphopantetheine attachment site KY998_06645 PF00698 Acyl transferase domain KY998_06650 PF02504 Fatty acid synthesis protein KY998_06655 PF08279 HTH domain KY998_06655 PF03061 Thioesterase superfamily KY998_06675 PF13684 Dihydroxyacetone kinase family KY998_06675 PF02734 DAK2 domain KY998_06680 PF03780 Asp23 family, cell envelope-related function KY998_06685 PF00830 Ribosomal L28 family KY998_06690 PF08183 Stage V sporulation protein family KY998_06695 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain KY998_06695 PF04263 Thiamin pyrophosphokinase, catalytic domain KY998_06700 PF00834 Ribulose-phosphate 3 epimerase family KY998_06705 PF03193 RsgA GTPase KY998_06705 PF16745 RsgA N-terminal domain KY998_06710 PF03793 PASTA domain KY998_06710 PF00069 Protein kinase domain KY998_06720 PF04055 Radical SAM superfamily KY998_06725 PF01189 16S rRNA methyltransferase RsmB/F KY998_06725 PF01029 NusB family KY998_06730 PF02911 Formyl transferase, C-terminal domain KY998_06730 PF00551 Formyl transferase KY998_06735 PF01327 Polypeptide deformylase KY998_06740 PF04851 Type III restriction enzyme, res subunit KY998_06740 PF18319 PriA DNA helicase Cys-rich region (CRR) domain KY998_06740 PF18074 Primosomal protein N C-terminal domain KY998_06740 PF17764 3′ DNA-binding domain (3′BD) KY998_06740 PF00271 Helicase conserved C-terminal domain KY998_06745 PF04127 DNA / pantothenate metabolism flavoprotein KY998_06745 PF02441 Flavoprotein KY998_06750 PF01192 RNA polymerase Rpb6 KY998_06755 PF00625 Guanylate kinase KY998_06760 PF04025 Domain of unknown function (DUF370) KY998_06765 PF08340 Domain of unknown function (DUF1732) KY998_06765 PF03755 YicC-like family, N-terminal region KY998_06770 PF00689 Cation transporting ATPase, C-terminus KY998_06770 PF00690 Cation transporter/ATPase, N-terminus KY998_06775 PF05670 NFACT protein RNA binding domain KY998_06785 PF01903 CbiX KY998_06800 PF01747 ATP-sulfurylase KY998_06800 PF14306 PUA-like domain KY998_06805 PF01384 Phosphate transporter family KY998_06810 PF01507 Phosphoadenosine phosphosulfate reductase family KY998_06820 PF00156 Phosphoribosyl transferase domain KY998_06825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family KY998_06830 PF01180 Dihydroorotate dehydrogenase KY998_06835 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B KY998_06835 PF00175 Oxidoreductase NAD-binding domain KY998_06840 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY998_06840 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain KY998_06840 PF02142 MGS-like domain KY998_06845 PF00117 Glutamine amidotransferase class-I KY998_06845 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KY998_06855 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KY998_06855 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KY998_06860 PF00860 Permease family KY998_06865 PF00156 Phosphoribosyl transferase domain KY998_06870 PF00849 RNA pseudouridylate synthase KY998_06870 PF01479 S4 domain KY998_06875 PF01252 Signal peptidase (SPase) II KY998_06880 PF01258 Prokaryotic dksA/traR C4-type zinc finger KY998_06885 PF08264 Anticodon-binding domain of tRNA KY998_06885 PF00133 tRNA synthetases class I (I, L, M and V) KY998_06885 PF06827 Zinc finger found in FPG and IleRS KY998_06890 PF05103 DivIVA protein KY998_06895 PF17774 Putative RNA-binding domain in YlmH KY998_06895 PF01479 S4 domain KY998_06900 PF02325 YGGT family KY998_06905 PF04472 Cell division protein SepF KY998_06910 PF01168 Alanine racemase, N-terminal domain KY998_06915 PF02578 Multi-copper polyphenol oxidoreductase laccase KY998_06920 PF05239 PRC-barrel domain KY998_06925 PF08241 Methyltransferase domain KY998_06930 PF00005 ABC transporter KY998_06935 PF04542 Sigma-70 region 2 KY998_06935 PF04539 Sigma-70 region 3 KY998_06935 PF04545 Sigma-70, region 4 KY998_06945 PF03419 Sporulation factor SpoIIGA KY998_06950 PF05922 Peptidase inhibitor I9 KY998_06950 PF00082 Subtilase family KY998_06960 PF12327 FtsZ family, C-terminal domain KY998_06960 PF00091 Tubulin/FtsZ family, GTPase domain KY998_06965 PF02491 SHS2 domain inserted in FTSA KY998_06970 PF06947 Protein of unknown function (DUF1290) KY998_06975 PF05949 Bacterial protein of unknown function (DUF881) KY998_06980 PF05949 Bacterial protein of unknown function (DUF881) KY998_06985 PF08478 POTRA domain, FtsQ-type KY998_06990 PF01565 FAD binding domain KY998_06990 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain KY998_06995 PF04101 Glycosyltransferase family 28 C-terminal domain KY998_06995 PF03033 Glycosyltransferase family 28 N-terminal domain KY998_07010 PF00953 Glycosyl transferase family 4 KY998_07010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 KY998_07015 PF01225 Mur ligase family, catalytic domain KY998_07015 PF02875 Mur ligase family, glutamate ligase domain KY998_07015 PF08245 Mur ligase middle domain KY998_07025 PF00905 Penicillin binding protein transpeptidase domain KY998_07025 PF03793 PASTA domain KY998_07025 PF03717 Penicillin-binding Protein dimerisation domain KY998_07035 PF01795 MraW methylase family KY998_07040 PF02381 MraZ protein, putative antitoxin-like KY998_07045 PF10079 Bacillithiol biosynthesis BshC KY998_07050 PF02558 Ketopantoate reductase PanE/ApbA KY998_07050 PF08546 Ketopantoate reductase PanE/ApbA C terminal KY998_07055 PF00583 Acetyltransferase (GNAT) family KY998_07065 PF01783 Ribosomal L32p protein family KY998_07070 PF02620 Large ribosomal RNA subunit accumulation protein YceD KY998_07075 PF05636 HIGH Nucleotidyl Transferase KY998_07080 PF05362 Lon protease (S16) C-terminal proteolytic domain KY998_07080 PF13180 PDZ domain KY998_07085 PF07670 Nucleoside recognition KY998_07090 PF01467 Cytidylyltransferase-like KY998_07100 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) KY998_07105 PF06133 Control of competence regulator ComK, YlbF/YmcA KY998_07110 PF14003 YlbE-like protein KY998_07115 PF14071 Putative coat protein KY998_07120 PF00188 Cysteine-rich secretory protein family KY998_07120 PF14504 CAP-associated N-terminal KY998_07125 PF00571 CBS domain KY998_07130 PF08868 YugN-like family KY998_07135 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) KY998_07140 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KY998_07145 PF00510 Cytochrome c oxidase subunit III KY998_07150 PF00115 Cytochrome C and Quinol oxidase polypeptide I KY998_07155 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KY998_07155 PF00034 Cytochrome c KY998_07155 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KY998_07160 PF01040 UbiA prenyltransferase family KY998_07165 PF02628 Cytochrome oxidase assembly protein KY998_07170 PF02785 Biotin carboxylase C-terminal domain KY998_07170 PF00289 Biotin carboxylase, N-terminal domain KY998_07170 PF00364 Biotin-requiring enzyme KY998_07170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain KY998_07170 PF00682 HMGL-like KY998_07170 PF02436 Conserved carboxylase domain KY998_07175 PF01098 Cell cycle protein KY998_07180 PF07408 Protein of unknown function (DUF1507) KY998_07185 PF04960 Glutaminase KY998_07195 PF02562 PhoH-like protein KY998_07195 PF13638 PIN domain KY998_07200 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KY998_07205 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) KY998_07210 PF01494 FAD binding domain KY998_07215 PF01047 MarR family KY998_07220 PF14036 YlaH-like protein KY998_07225 PF00679 Elongation factor G C-terminus KY998_07225 PF14492 Elongation Factor G, domain II KY998_07225 PF00009 Elongation factor Tu GTP binding domain KY998_07225 PF03144 Elongation factor Tu domain 2 KY998_07235 PF13490 Putative zinc-finger KY998_07240 PF08281 Sigma-70, region 4 KY998_07240 PF04542 Sigma-70 region 2 KY998_07255 PF00583 Acetyltransferase (GNAT) family KY998_07260 PF00459 Inositol monophosphatase family KY998_07270 PF06335 Protein of unknown function (DUF1054) KY998_07275 PF05256 Uncharacterised protein family (UPF0223) KY998_07280 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KY998_07280 PF01276 Orn/Lys/Arg decarboxylase, major domain KY998_07285 PF13790 SR1 protein KY998_07295 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY998_07295 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_07300 PF00364 Biotin-requiring enzyme KY998_07300 PF02817 e3 binding domain KY998_07300 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) KY998_07305 PF02779 Transketolase, pyrimidine binding domain KY998_07305 PF02780 Transketolase, C-terminal domain KY998_07310 PF00676 Dehydrogenase E1 component KY998_07315 PF10368 Putative cell-wall binding lipoprotein KY998_07325 PF01327 Polypeptide deformylase KY998_07335 PF07288 Protein of unknown function (DUF1447) KY998_07340 PF00753 Metallo-beta-lactamase superfamily KY998_07340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain KY998_07340 PF17770 Ribonuclease J C-terminal domain KY998_07345 PF13382 Adenine deaminase C-terminal domain KY998_07345 PF01979 Amidohydrolase family KY998_07360 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KY998_07360 PF18277 AbrB C-terminal domain KY998_07370 PF17447 Uncharacterized YkpC-like KY998_07375 PF02073 Thermophilic metalloprotease (M29) KY998_07385 PF00005 ABC transporter KY998_07385 PF12848 ABC transporter KY998_07400 PF10502 Signal peptidase, peptidase S26 KY998_07405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_07405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_07415 PF00455 DeoR C terminal sensor domain KY998_07415 PF08220 DeoR-like helix-turn-helix domain KY998_07420 PF02687 FtsX-like permease family KY998_07420 PF12704 MacB-like periplasmic core domain KY998_07425 PF00005 ABC transporter KY998_07435 PF04893 Yip1 domain KY998_07455 PF02597 ThiS family KY998_07460 PF02391 MoaE protein KY998_07465 PF03205 Molybdopterin guanine dinucleotide synthesis protein B KY998_07470 PF00994 Probable molybdopterin binding domain KY998_07470 PF03453 MoeA N-terminal region (domain I and II) KY998_07470 PF03454 MoeA C-terminal region (domain IV) KY998_07480 PF12804 MobA-like NTP transferase domain KY998_07495 PF00578 AhpC/TSA family KY998_07500 PF10417 C-terminal domain of 1-Cys peroxiredoxin KY998_07500 PF00578 AhpC/TSA family KY998_07505 PF03698 Uncharacterised protein family (UPF0180) KY998_07510 PF07687 Peptidase dimerisation domain KY998_07510 PF01546 Peptidase family M20/M25/M40 KY998_07515 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_07515 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal KY998_07515 PF14602 Hexapeptide repeat of succinyl-transferase KY998_07520 PF00258 Flavodoxin KY998_07530 PF00258 Flavodoxin KY998_07535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_07535 PF03466 LysR substrate binding domain KY998_07545 PF14156 Antirepressor AbbA KY998_07550 PF04308 Ribonuclease H-like KY998_07560 PF08796 Protein of unknown function (DUF1797) KY998_07570 PF10388 EAL-domain associated signalling protein domain KY998_07570 PF00563 EAL domain KY998_07580 PF10518 TAT (twin-arginine translocation) pathway signal sequence KY998_07580 PF00149 Calcineurin-like phosphoesterase KY998_07585 PF03734 L,D-transpeptidase catalytic domain KY998_07585 PF01476 LysM domain KY998_07590 PF07690 Major Facilitator Superfamily KY998_07595 PF14177 YkyB-like protein KY998_07600 PF01584 CheW-like domain KY998_07600 PF00072 Response regulator receiver domain KY998_07610 PF06271 RDD family KY998_07625 PF08447 PAS fold KY998_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_07625 PF00512 His Kinase A (phospho-acceptor) domain KY998_07625 PF00989 PAS fold KY998_07630 PF00905 Penicillin binding protein transpeptidase domain KY998_07630 PF03717 Penicillin-binding Protein dimerisation domain KY998_07635 PF00188 Cysteine-rich secretory protein family KY998_07650 PF02743 Cache domain KY998_07650 PF00672 HAMP domain KY998_07650 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_07655 PF00583 Acetyltransferase (GNAT) family KY998_07665 PF11132 Transcriptional regulator protein (SplA) KY998_07670 PF05524 PEP-utilising enzyme, N-terminal KY998_07670 PF00391 PEP-utilising enzyme, mobile domain KY998_07670 PF02896 PEP-utilising enzyme, TIM barrel domain KY998_07675 PF00381 PTS HPr component phosphorylation site KY998_07680 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY998_07680 PF02378 Phosphotransferase system, EIIC KY998_07680 PF00367 phosphotransferase system, EIIB KY998_07685 PF00874 PRD domain KY998_07685 PF03123 CAT RNA binding domain KY998_07690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family KY998_07690 PF00356 Bacterial regulatory proteins, lacI family KY998_07700 PF01321 Creatinase/Prolidase N-terminal domain KY998_07700 PF00557 Metallopeptidase family M24 KY998_07710 PF00578 AhpC/TSA family KY998_07715 PF01943 Polysaccharide biosynthesis protein KY998_07720 PF07486 Cell Wall Hydrolase KY998_07730 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) KY998_07760 PF11188 Protein of unknown function (DUF2975) KY998_07765 PF13443 Cro/C1-type HTH DNA-binding domain KY998_07770 PF05675 Protein of unknown function (DUF817) KY998_07780 PF13176 Tetratricopeptide repeat KY998_07780 PF18801 response regulator aspartate phosphatase H, N terminal KY998_07785 PF14489 QueF-like protein KY998_07790 PF04055 Radical SAM superfamily KY998_07795 PF01242 6-pyruvoyl tetrahydropterin synthase KY998_07800 PF06508 Queuosine biosynthesis protein QueC KY998_07810 PF07724 AAA domain (Cdc48 subfamily) KY998_07810 PF10431 C-terminal, D2-small domain, of ClpB protein KY998_07810 PF00004 ATPase family associated with various cellular activities (AAA) KY998_07810 PF17871 AAA lid domain KY998_07815 PF01618 MotA/TolQ/ExbB proton channel family KY998_07820 PF13677 Membrane MotB of proton-channel complex MotA/MotB KY998_07820 PF00691 OmpA family KY998_07825 PF01047 MarR family KY998_07830 PF02743 Cache domain KY998_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_07830 PF00512 His Kinase A (phospho-acceptor) domain KY998_07840 PF06803 Protein of unknown function (DUF1232) KY998_07845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_07850 PF03079 ARD/ARD' family KY998_07855 PF00596 Class II Aldolase and Adducin N-terminal domain KY998_07860 PF00596 Class II Aldolase and Adducin N-terminal domain KY998_07865 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain KY998_07865 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain KY998_07870 PF00155 Aminotransferase class I and II KY998_07875 PF00795 Carbon-nitrogen hydrolase KY998_07880 PF01636 Phosphotransferase enzyme family KY998_07885 PF01008 Initiation factor 2 subunit family KY998_07895 PF13426 PAS domain KY998_07895 PF13188 PAS domain KY998_07895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_07895 PF00512 His Kinase A (phospho-acceptor) domain KY998_07895 PF00989 PAS fold KY998_07900 PF01757 Acyltransferase family KY998_07920 PF05223 NTF2-like N-terminal transpeptidase domain KY998_07920 PF03717 Penicillin-binding Protein dimerisation domain KY998_07920 PF00905 Penicillin binding protein transpeptidase domain KY998_07925 PF02386 Cation transport protein KY998_07930 PF01435 Peptidase family M48 KY998_07935 PF08876 Domain of unknown function (DUF1836) KY998_07940 PF00269 Small, acid-soluble spore proteins, alpha/beta type KY998_07945 PF12791 Anti-sigma factor N-terminus KY998_07950 PF04542 Sigma-70 region 2 KY998_07960 PF09335 SNARE associated Golgi protein KY998_07965 PF00990 Diguanylate cyclase, GGDEF domain KY998_07965 PF03707 Bacterial signalling protein N terminal repeat KY998_07965 PF00563 EAL domain KY998_07970 PF02735 Ku70/Ku80 beta-barrel domain KY998_07975 PF01068 ATP dependent DNA ligase domain KY998_07995 PF13411 MerR HTH family regulatory protein KY998_08005 PF00571 CBS domain KY998_08005 PF01769 Divalent cation transporter KY998_08005 PF03448 MgtE intracellular N domain KY998_08010 PF11132 Transcriptional regulator protein (SplA) KY998_08015 PF00082 Subtilase family KY998_08020 PF08267 Cobalamin-independent synthase, N-terminal domain KY998_08020 PF01717 Cobalamin-independent synthase, Catalytic domain KY998_08035 PF00300 Histidine phosphatase superfamily (branch 1) KY998_08040 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region KY998_08050 PF02566 OsmC-like protein KY998_08055 PF01047 MarR family KY998_08065 PF00171 Aldehyde dehydrogenase family KY998_08070 PF00696 Amino acid kinase family KY998_08070 PF01472 PUA domain KY998_08075 PF01842 ACT domain KY998_08075 PF00551 Formyl transferase KY998_08080 PF00893 Small Multidrug Resistance protein KY998_08085 PF00893 Small Multidrug Resistance protein KY998_08090 PF12867 DinB superfamily KY998_08110 PF00544 Pectate lyase KY998_08115 PF04239 Protein of unknown function (DUF421) KY998_08120 PF03061 Thioesterase superfamily KY998_08140 PF13378 Enolase C-terminal domain-like KY998_08140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KY998_08145 PF17676 LD-carboxypeptidase C-terminal domain KY998_08145 PF02016 LD-carboxypeptidase N-terminal domain KY998_08150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_08155 PF00005 ABC transporter KY998_08155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY998_08160 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08160 PF12911 N-terminal TM domain of oligopeptide transport permease C KY998_08165 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08170 PF04951 D-aminopeptidase KY998_08175 PF03807 NADP oxidoreductase coenzyme F420-dependent KY998_08175 PF14748 Pyrroline-5-carboxylate reductase dimerisation KY998_08190 PF13520 Amino acid permease KY998_08195 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08200 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08205 PF01547 Bacterial extracellular solute-binding protein KY998_08215 PF02449 Beta-galactosidase KY998_08215 PF08533 Beta-galactosidase C-terminal domain KY998_08215 PF08532 Beta-galactosidase trimerisation domain KY998_08220 PF00657 GDSL-like Lipase/Acylhydrolase KY998_08230 PF01839 FG-GAP repeat KY998_08230 PF18370 Rhamnogalacturonan I lyases beta-sheet domain KY998_08245 PF18370 Rhamnogalacturonan I lyases beta-sheet domain KY998_08250 PF04854 Protein of unknown function, DUF624 KY998_08255 PF09224 Domain of unknown function (DUF1961) KY998_08260 PF13472 GDSL-like Lipase/Acylhydrolase family KY998_08270 PF07470 Glycosyl Hydrolase Family 88 KY998_08280 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08285 PF13416 Bacterial extracellular solute-binding protein KY998_08290 PF12833 Helix-turn-helix domain KY998_08290 PF00072 Response regulator receiver domain KY998_08300 PF04854 Protein of unknown function, DUF624 KY998_08310 PF01865 Protein of unknown function DUF47 KY998_08315 PF01384 Phosphate transporter family KY998_08320 PF14171 Toxin SpoIISA, type II toxin-antitoxin system KY998_08330 PF07690 Major Facilitator Superfamily KY998_08340 PF00106 short chain dehydrogenase KY998_08345 PF03786 D-mannonate dehydratase (UxuA) KY998_08350 PF00107 Zinc-binding dehydrogenase KY998_08350 PF08240 Alcohol dehydrogenase GroES-like domain KY998_08355 PF00392 Bacterial regulatory proteins, gntR family KY998_08355 PF07729 FCD domain KY998_08360 PF01471 Putative peptidoglycan binding domain KY998_08360 PF01510 N-acetylmuramoyl-L-alanine amidase KY998_08365 PF04688 SPP1 phage holin KY998_08370 PF10779 Haemolysin XhlA KY998_08395 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) KY998_08400 PF04865 Baseplate J-like protein KY998_08405 PF10934 Protein of unknown function (DUF2634) KY998_08410 PF10844 Protein of unknown function (DUF2577) KY998_08420 PF01476 LysM domain KY998_08425 PF01464 Transglycosylase SLT domain KY998_08435 PF08890 Phage XkdN-like tail assembly chaperone protein, TAC KY998_08440 PF09393 Phage tail tube protein KY998_08445 PF04984 Phage tail sheath protein subtilisin-like domain KY998_08445 PF17482 Phage tail sheath C-terminal domain KY998_08445 PF17481 Phage tail sheath protein beta-sandwich domain KY998_08460 PF04883 Bacteriophage HK97-gp10, putative tail-component KY998_08465 PF12206 Domain of unknown function (DUF3599) KY998_08470 PF11436 Protein of unknown function (DUF3199) KY998_08475 PF05065 Phage capsid family KY998_08480 PF14550 Putative phage serine protease XkdF KY998_08485 PF04860 Phage portal protein KY998_08490 PF17288 Terminase RNAseH like domain KY998_08490 PF04466 Phage terminase large subunit KY998_08495 PF10668 Phage terminase small subunit KY998_08495 PF03592 Terminase small subunit KY998_08500 PF08281 Sigma-70, region 4 KY998_08505 PF17356 Phage-like element PBSX protein XtrA KY998_08520 PF01695 IstB-like ATP binding protein KY998_08540 PF01381 Helix-turn-helix KY998_08545 PF06114 IrrE N-terminal-like domain KY998_08550 PF05908 Poly-gamma-glutamate hydrolase KY998_08565 PF00440 Bacterial regulatory proteins, tetR family KY998_08570 PF07690 Major Facilitator Superfamily KY998_08575 PF06725 3D domain KY998_08575 PF01476 LysM domain KY998_08580 PF16800 IseA DL-endopeptidase inhibitor KY998_08585 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_08595 PF03466 LysR substrate binding domain KY998_08600 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KY998_08600 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KY998_08605 PF00667 FAD binding domain KY998_08605 PF00175 Oxidoreductase NAD-binding domain KY998_08605 PF00258 Flavodoxin KY998_08610 PF03466 LysR substrate binding domain KY998_08610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_08620 PF12464 Maltose acetyltransferase KY998_08620 PF14602 Hexapeptide repeat of succinyl-transferase KY998_08635 PF00589 Phage integrase family KY998_08635 PF02899 Phage integrase, N-terminal SAM-like domain KY998_08675 PF04616 Glycosyl hydrolases family 43 KY998_08685 PF11954 Domain of unknown function (DUF3471) KY998_08685 PF00144 Beta-lactamase KY998_08700 PF05684 Protein of unknown function (DUF819) KY998_08705 PF01053 Cys/Met metabolism PLP-dependent enzyme KY998_08730 PF00756 Putative esterase KY998_08740 PF13673 Acetyltransferase (GNAT) domain KY998_08745 PF04138 GtrA-like protein KY998_08750 PF00483 Nucleotidyl transferase KY998_08760 PF09335 SNARE associated Golgi protein KY998_08770 PF13361 UvrD-like helicase C-terminal domain KY998_08770 PF00580 UvrD/REP helicase N-terminal domain KY998_08775 PF14069 Stage VI sporulation protein F KY998_08790 PF07098 Protein of unknown function (DUF1360) KY998_08795 PF07552 Spore Coat Protein X and V domain KY998_08805 PF07552 Spore Coat Protein X and V domain KY998_08810 PF10612 Spore coat protein Z KY998_08815 PF10612 Spore coat protein Z KY998_08820 PF14153 Spore coat protein CotO KY998_08830 PF08543 Phosphomethylpyrimidine kinase KY998_08835 PF00899 ThiF family KY998_08840 PF05690 Thiazole biosynthesis protein ThiG KY998_08845 PF02597 ThiS family KY998_08850 PF01266 FAD dependent oxidoreductase KY998_08855 PF02581 Thiamine monophosphate synthase KY998_08860 PF03070 TENA/THI-4/PQQC family KY998_08865 PF02080 TrkA-C domain KY998_08865 PF02254 TrkA-N domain KY998_08865 PF00999 Sodium/hydrogen exchanger family KY998_08870 PF00149 Calcineurin-like phosphoesterase KY998_08880 PF01513 ATP-NAD kinase KY998_08885 PF04607 Region found in RelA / SpoT proteins KY998_08895 PF01928 CYTH domain KY998_08900 PF01464 Transglycosylase SLT domain KY998_08905 PF01152 Bacterial-like globin KY998_08920 PF01432 Peptidase family M3 KY998_08920 PF08439 Oligopeptidase F KY998_08925 PF06054 Competence protein CoiA-like family KY998_08930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KY998_08930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_08930 PF00989 PAS fold KY998_08930 PF17203 Single cache domain 3 KY998_08940 PF01970 Tripartite tricarboxylate transporter TctA family KY998_08955 PF01270 Glycosyl hydrolases family 8 KY998_08960 PF05389 Negative regulator of genetic competence (MecA) KY998_08970 PF03741 Integral membrane protein TerC family KY998_08975 PF03960 ArsC family KY998_08980 PF13508 Acetyltransferase (GNAT) domain KY998_08995 PF00528 Binding-protein-dependent transport system inner membrane component KY998_08995 PF12911 N-terminal TM domain of oligopeptide transport permease C KY998_09005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_09010 PF00579 tRNA synthetases class I (W and Y) KY998_09015 PF12227 Protein of unknown function (DUF3603) KY998_09025 PF00528 Binding-protein-dependent transport system inner membrane component KY998_09025 PF12911 N-terminal TM domain of oligopeptide transport permease C KY998_09030 PF00528 Binding-protein-dependent transport system inner membrane component KY998_09035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_09050 PF10026 Predicted Zn-dependent protease (DUF2268) KY998_09060 PF00109 Beta-ketoacyl synthase, N-terminal domain KY998_09060 PF02801 Beta-ketoacyl synthase, C-terminal domain KY998_09065 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III KY998_09065 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal KY998_09075 PF10815 ComZ KY998_09080 PF02608 ABC transporter substrate-binding protein PnrA-like KY998_09100 PF14168 YjzC-like protein KY998_09105 PF02673 Bacitracin resistance protein BacA KY998_09110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KY998_09110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KY998_09120 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain KY998_09120 PF00117 Glutamine amidotransferase class-I KY998_09130 PF00696 Amino acid kinase family KY998_09135 PF01960 ArgJ family KY998_09140 PF01118 Semialdehyde dehydrogenase, NAD binding domain KY998_09140 PF02774 Semialdehyde dehydrogenase, dimerisation domain KY998_09145 PF01883 Iron-sulfur cluster assembly protein KY998_09150 PF00326 Prolyl oligopeptidase family KY998_09160 PF12758 Protein of unknown function (DUF3813) KY998_09165 PF00478 IMP dehydrogenase / GMP reductase domain KY998_09170 PF12690 Intracellular proteinase inhibitor KY998_09175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_09175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_09195 PF13509 S1 domain KY998_09195 PF17783 CvfB-like winged helix domain KY998_09200 PF04461 Protein of unknown function (DUF520) KY998_09210 PF02574 Homocysteine S-methyltransferase KY998_09210 PF00809 Pterin binding enzyme KY998_09210 PF02965 Vitamin B12 dependent methionine synthase, activation domain KY998_09210 PF02310 B12 binding domain KY998_09210 PF02607 B12 binding domain KY998_09215 PF13280 WYL domain KY998_09215 PF08279 HTH domain KY998_09225 PF13673 Acetyltransferase (GNAT) domain KY998_09230 PF06276 Ferric iron reductase FhuF-like transporter KY998_09230 PF04183 IucA / IucC family KY998_09235 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) KY998_09245 PF06276 Ferric iron reductase FhuF-like transporter KY998_09245 PF04183 IucA / IucC family KY998_09250 PF00282 Pyridoxal-dependent decarboxylase conserved domain KY998_09255 PF00202 Aminotransferase class-III KY998_09260 PF00155 Aminotransferase class I and II KY998_09260 PF00392 Bacterial regulatory proteins, gntR family KY998_09265 PF01810 LysE type translocator KY998_09280 PF05504 Spore germination B3/ GerAC like, C-terminal KY998_09285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_09285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_09290 PF00356 Bacterial regulatory proteins, lacI family KY998_09300 PF12833 Helix-turn-helix domain KY998_09300 PF02311 AraC-like ligand binding domain KY998_09305 PF01554 MatE KY998_09310 PF00543 Nitrogen regulatory protein P-II KY998_09315 PF00909 Ammonium Transporter Family KY998_09320 PF00733 Asparagine synthase KY998_09320 PF13537 Glutamine amidotransferase domain KY998_09325 PF10949 Protein of unknown function (DUF2777) KY998_09330 PF07457 Protein of unknown function (DUF1516) KY998_09335 PF03193 RsgA GTPase KY998_09340 PF01557 Fumarylacetoacetate (FAA) hydrolase family KY998_09350 PF08757 CotH kinase protein KY998_09355 PF09388 Spo0E like sporulation regulatory protein KY998_09360 PF12650 Domain of unknown function (DUF3784) KY998_09365 PF10676 Spore germination protein gerPA/gerPF KY998_09370 PF10803 Spore germination GerPB KY998_09375 PF10737 Spore germination protein GerPC KY998_09385 PF10970 Spore germination protein GerPE KY998_09390 PF10676 Spore germination protein gerPA/gerPF KY998_09395 PF13476 AAA domain KY998_09420 PF00528 Binding-protein-dependent transport system inner membrane component KY998_09430 PF02915 Rubrerythrin KY998_09450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_09450 PF12793 Sugar transport-related sRNA regulator N-term KY998_09455 PF07690 Major Facilitator Superfamily KY998_09460 PF00501 AMP-binding enzyme KY998_09460 PF13193 AMP-binding enzyme C-terminal domain KY998_09465 PF05067 Manganese containing catalase KY998_09475 PF11007 Spore coat associated protein JA (CotJA) KY998_09480 PF05145 Transition state regulatory protein AbrB KY998_09485 PF02056 Family 4 glycosyl hydrolase KY998_09485 PF11975 Family 4 glycosyl hydrolase C-terminal domain KY998_09490 PF00528 Binding-protein-dependent transport system inner membrane component KY998_09495 PF00528 Binding-protein-dependent transport system inner membrane component KY998_09515 PF18801 response regulator aspartate phosphatase H, N terminal KY998_09520 PF10901 Protein of unknown function (DUF2690) KY998_09525 PF07690 Major Facilitator Superfamily KY998_09535 PF11392 Protein of unknown function (DUF2877) KY998_09540 PF06545 Protein of unknown function (DUF1116) KY998_09545 PF02629 CoA binding domain KY998_09545 PF00549 CoA-ligase KY998_09550 PF02615 Malate/L-lactate dehydrogenase KY998_09555 PF02615 Malate/L-lactate dehydrogenase KY998_09560 PF07883 Cupin domain KY998_09560 PF05899 Protein of unknown function (DUF861) KY998_09565 PF01546 Peptidase family M20/M25/M40 KY998_09570 PF01979 Amidohydrolase family KY998_09575 PF07905 Purine catabolism regulatory protein-like family KY998_09575 PF13556 PucR C-terminal helix-turn-helix domain KY998_09575 PF17853 GGDEF-like domain KY998_09590 PF10502 Signal peptidase, peptidase S26 KY998_09595 PF09335 SNARE associated Golgi protein KY998_09605 PF06338 ComK protein KY998_09610 PF08858 IDEAL domain KY998_09620 PF00355 Rieske [2Fe-2S] domain KY998_09620 PF01266 FAD dependent oxidoreductase KY998_09630 PF02632 BioY family KY998_09635 PF00501 AMP-binding enzyme KY998_09635 PF13193 AMP-binding enzyme C-terminal domain KY998_09640 PF02803 Thiolase, C-terminal domain KY998_09640 PF00108 Thiolase, N-terminal domain KY998_09645 PF00300 Histidine phosphatase superfamily (branch 1) KY998_09650 PF01032 FecCD transport family KY998_09655 PF01032 FecCD transport family KY998_09665 PF00892 EamA-like transporter family KY998_09670 PF00082 Subtilase family KY998_09670 PF05922 Peptidase inhibitor I9 KY998_09675 PF01435 Peptidase family M48 KY998_09675 PF16491 CAAX prenyl protease N-terminal, five membrane helices KY998_09690 PF07883 Cupin domain KY998_09690 PF01381 Helix-turn-helix KY998_09700 PF00501 AMP-binding enzyme KY998_09700 PF13193 AMP-binding enzyme C-terminal domain KY998_09705 PF03099 Biotin/lipoate A/B protein ligase family KY998_09705 PF10437 Bacterial lipoate protein ligase C-terminus KY998_09710 PF12706 Beta-lactamase superfamily domain KY998_09715 PF14149 YhfH-like protein KY998_09745 PF17932 Tetracyclin repressor-like, C-terminal domain KY998_09745 PF00440 Bacterial regulatory proteins, tetR family KY998_09750 PF01593 Flavin containing amine oxidoreductase KY998_09755 PF00762 Ferrochelatase KY998_09760 PF01208 Uroporphyrinogen decarboxylase (URO-D) KY998_09765 PF00905 Penicillin binding protein transpeptidase domain KY998_09765 PF00912 Transglycosylase KY998_09770 PF03992 Antibiotic biosynthesis monooxygenase KY998_09780 PF01546 Peptidase family M20/M25/M40 KY998_09780 PF07687 Peptidase dimerisation domain KY998_09785 PF12787 EcsC protein family KY998_09790 PF05975 Bacterial ABC transporter protein EcsB KY998_09795 PF00005 ABC transporter KY998_09800 PF01230 HIT domain KY998_09805 PF00266 Aminotransferase class-V KY998_09810 PF17099 Tryptophan transporter TrpP KY998_09820 PF12732 YtxH-like protein KY998_09825 PF01047 MarR family KY998_09830 PF08963 Protein of unknown function (DUF1878) KY998_09835 PF11667 Putative zincin peptidase KY998_09850 PF09680 Family of unknown function KY998_09860 PF14147 Sporulation protein YhaL KY998_09865 PF01966 HD domain KY998_09870 PF13514 AAA domain KY998_09875 PF00149 Calcineurin-like phosphoesterase KY998_09885 PF00005 ABC transporter KY998_09885 PF13732 Domain of unknown function (DUF4162) KY998_09910 PF00378 Enoyl-CoA hydratase/isomerase KY998_09915 PF04055 Radical SAM superfamily KY998_09925 PF06133 Control of competence regulator ComK, YlbF/YmcA KY998_09930 PF04286 Protein of unknown function (DUF445) KY998_09940 PF14398 YheC/D like ATP-grasp KY998_09945 PF17277 Family of unknown function (DUF5342) KY998_09950 PF13556 PucR C-terminal helix-turn-helix domain KY998_09955 PF03459 TOBE domain KY998_09955 PF17912 MalK OB fold domain KY998_09955 PF00005 ABC transporter KY998_09965 PF00269 Small, acid-soluble spore proteins, alpha/beta type KY998_09975 PF13460 NAD(P)H-binding KY998_09980 PF00005 ABC transporter KY998_09980 PF00664 ABC transporter transmembrane region KY998_09990 PF00582 Universal stress protein family KY998_10010 PF16302 Domain of unknown function (DUF4944) KY998_10015 PF01263 Aldose 1-epimerase KY998_10020 PF03553 Na+/H+ antiporter family KY998_10025 PF01063 Amino-transferase class IV KY998_10030 PF01522 Polysaccharide deacetylase KY998_10045 PF02146 Sir2 family KY998_10050 PF00924 Mechanosensitive ion channel KY998_10055 PF17444 Uncharacterized YhdX-like KY998_10065 PF02537 CrcB-like protein, Camphor Resistance (CrcB) KY998_10075 PF01520 N-acetylmuramoyl-L-alanine amidase KY998_10075 PF05036 Sporulation related domain KY998_10090 PF00571 CBS domain KY998_10090 PF03471 Transporter associated domain KY998_10090 PF01595 Cyclin M transmembrane N-terminal domain KY998_10095 PF13411 MerR HTH family regulatory protein KY998_10100 PF03471 Transporter associated domain KY998_10100 PF01595 Cyclin M transmembrane N-terminal domain KY998_10100 PF00571 CBS domain KY998_10105 PF18665 Tetracyclin repressor-like, C-terminal domain KY998_10105 PF00440 Bacterial regulatory proteins, tetR family KY998_10115 PF05656 Protein of unknown function (DUF805) KY998_10120 PF01553 Acyltransferase KY998_10125 PF00248 Aldo/keto reductase family KY998_10130 PF07883 Cupin domain KY998_10135 PF04542 Sigma-70 region 2 KY998_10135 PF08281 Sigma-70, region 4 KY998_10140 PF13791 Sigma factor regulator C-terminal KY998_10140 PF13800 Sigma factor regulator N-terminal KY998_10145 PF17453 Sigma-M inhibitor KY998_10190 PF00209 Sodium:neurotransmitter symporter family KY998_10200 PF07995 Glucose / Sorbosone dehydrogenase KY998_10205 PF00285 Citrate synthase, C-terminal domain KY998_10210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_10210 PF03466 LysR substrate binding domain KY998_10220 PF04293 SpoVR like protein KY998_10225 PF00970 Oxidoreductase FAD-binding domain KY998_10225 PF00042 Globin KY998_10225 PF00175 Oxidoreductase NAD-binding domain KY998_10230 PF02082 Transcriptional regulator KY998_10235 PF13028 Protein of unknown function (DUF3889) KY998_10240 PF14148 YhdB-like protein KY998_10245 PF03358 NADPH-dependent FMN reductase KY998_10250 PF00196 Bacterial regulatory proteins, luxR family KY998_10250 PF00072 Response regulator receiver domain KY998_10255 PF07730 Histidine kinase KY998_10255 PF13185 GAF domain KY998_10270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY998_10270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY998_10270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY998_10270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY998_10275 PF16901 C-terminal domain of alpha-glycerophosphate oxidase KY998_10275 PF01266 FAD dependent oxidoreductase KY998_10285 PF00230 Major intrinsic protein KY998_10290 PF04309 Glycerol-3-phosphate responsive antiterminator KY998_10295 PF00107 Zinc-binding dehydrogenase KY998_10295 PF08240 Alcohol dehydrogenase GroES-like domain KY998_10310 PF01226 Formate/nitrite transporter KY998_10315 PF16326 ABC transporter C-terminal domain KY998_10315 PF12848 ABC transporter KY998_10315 PF00005 ABC transporter KY998_10325 PF00583 Acetyltransferase (GNAT) family KY998_10325 PF00795 Carbon-nitrogen hydrolase KY998_10335 PF00571 CBS domain KY998_10340 PF17326 Family of unknown function (DUF5365) KY998_10345 PF00849 RNA pseudouridylate synthase KY998_10345 PF01479 S4 domain KY998_10360 PF04203 Sortase domain KY998_10365 PF02872 5'-nucleotidase, C-terminal domain KY998_10365 PF00746 LPXTG cell wall anchor motif KY998_10365 PF00149 Calcineurin-like phosphoesterase KY998_10365 PF00565 Staphylococcal nuclease homologue KY998_10370 PF13188 PAS domain KY998_10370 PF00512 His Kinase A (phospho-acceptor) domain KY998_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_10370 PF00989 PAS fold KY998_10370 PF13426 PAS domain KY998_10375 PF07875 Coat F domain KY998_10385 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KY998_10400 PF00375 Sodium:dicarboxylate symporter family KY998_10405 PF03180 NLPA lipoprotein KY998_10410 PF00528 Binding-protein-dependent transport system inner membrane component KY998_10415 PF09383 NIL domain KY998_10415 PF00005 ABC transporter KY998_10420 PF00313 'Cold-shock' DNA-binding domain KY998_10425 PF12679 ABC-2 family transporter protein KY998_10430 PF00005 ABC transporter KY998_10440 PF00392 Bacterial regulatory proteins, gntR family KY998_10455 PF03358 NADPH-dependent FMN reductase KY998_10460 PF07690 Major Facilitator Superfamily KY998_10470 PF04285 Protein of unknown function (DUF444) KY998_10475 PF08298 PrkA AAA domain KY998_10475 PF06798 PrkA serine protein kinase C-terminal domain KY998_10485 PF04519 Polymer-forming cytoskeletal KY998_10490 PF13171 Protein of unknown function (DUF4004) KY998_10495 PF00588 SpoU rRNA Methylase family KY998_10500 PF12671 Putative amidase domain KY998_10505 PF08331 Domain of unknown function (DUF1730) KY998_10520 PF00253 Ribosomal protein S14p/S29e KY998_10540 PF12399 Branched-chain amino acid ATP-binding cassette transporter KY998_10540 PF00005 ABC transporter KY998_10550 PF01381 Helix-turn-helix KY998_10560 PF00296 Luciferase-like monooxygenase KY998_10565 PF00528 Binding-protein-dependent transport system inner membrane component KY998_10570 PF09084 NMT1/THI5 like KY998_10580 PF01964 Radical SAM ThiC family KY998_10580 PF13667 ThiC-associated domain KY998_10585 PF01487 Type I 3-dehydroquinase KY998_10605 PF03129 Anticodon binding domain KY998_10605 PF02824 TGS domain KY998_10605 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY998_10605 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KY998_10625 PF08863 YolD-like protein KY998_10650 PF04740 LXG domain of WXG superfamily KY998_10650 PF14449 Pre-toxin TG KY998_10660 PF01183 Glycosyl hydrolases family 25 KY998_10660 PF08239 Bacterial SH3 domain KY998_10665 PF04688 SPP1 phage holin KY998_10670 PF10779 Haemolysin XhlA KY998_10690 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain KY998_10690 PF12708 Pectate lyase superfamily protein KY998_10695 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KY998_10695 PF13457 GW (Gly-Tryp) dipeptide domain KY998_10705 PF01464 Transglycosylase SLT domain KY998_10750 PF00574 Clp protease KY998_10765 PF03354 Phage Terminase KY998_10785 PF11122 Inner spore coat protein D KY998_10795 PF00589 Phage integrase family KY998_10815 PF00145 C-5 cytosine-specific DNA methylase KY998_10830 PF17356 Phage-like element PBSX protein XtrA KY998_10900 PF08863 YolD-like protein KY998_11095 PF01068 ATP dependent DNA ligase domain KY998_11125 PF00145 C-5 cytosine-specific DNA methylase KY998_11145 PF06725 3D domain KY998_11150 PF02511 Thymidylate synthase complementing protein KY998_11160 PF00268 Ribonucleotide reductase, small chain KY998_11175 PF02867 Ribonucleotide reductase, barrel domain KY998_11175 PF00317 Ribonucleotide reductase, all-alpha domain KY998_11175 PF08343 Ribonucleotide reductase N-terminal KY998_11180 PF07972 NrdI Flavodoxin like KY998_11200 PF02075 Crossover junction endodeoxyribonuclease RuvC KY998_11220 PF01367 5'-3' exonuclease, C-terminal SAM fold KY998_11220 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KY998_11220 PF00476 DNA polymerase family A KY998_11220 PF01612 3'-5' exonuclease KY998_11350 PF02899 Phage integrase, N-terminal SAM-like domain KY998_11350 PF00589 Phage integrase family KY998_11445 PF18576 Helix-turn-helix domain KY998_11445 PF14540 Nucleotidyltransferase-like KY998_11450 PF11023 Zinc-ribbon containing domain KY998_11455 PF01475 Ferric uptake regulator family KY998_11460 PF00578 AhpC/TSA family KY998_11475 PF06081 Aromatic acid exporter family member 1 KY998_11485 PF00528 Binding-protein-dependent transport system inner membrane component KY998_11500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region KY998_11500 PF00005 ABC transporter KY998_11505 PF00005 ABC transporter KY998_11505 PF00664 ABC transporter transmembrane region KY998_11510 PF04167 Protein of unknown function (DUF402) KY998_11515 PF14182 YgaB-like protein KY998_11535 PF00730 HhH-GPD superfamily base excision DNA repair protein KY998_11535 PF14815 NUDIX domain KY998_11540 PF04307 LexA-binding, inner membrane-associated putative hydrolase KY998_11545 PF09586 Bacterial membrane protein YfhO KY998_11550 PF00535 Glycosyl transferase family 2 KY998_11555 PF14043 WVELL protein KY998_11560 PF08176 Small acid-soluble spore protein K family KY998_11570 PF08838 Protein of unknown function (DUF1811) KY998_11575 PF02631 RecX family KY998_11580 PF01370 NAD dependent epimerase/dehydratase family KY998_11580 PF08338 Domain of unknown function (DUF1731) KY998_11595 PF14151 YfhD-like protein KY998_11600 PF00881 Nitroreductase family KY998_11605 PF02567 Phenazine biosynthesis-like protein KY998_11610 PF09924 Uncharacterised conserved protein (DUF2156) KY998_11610 PF03706 Lysylphosphatidylglycerol synthase TM region KY998_11615 PF12867 DinB superfamily KY998_11620 PF00293 NUDIX domain KY998_11625 PF02525 Flavodoxin-like fold KY998_11630 PF13416 Bacterial extracellular solute-binding protein KY998_11635 PF02311 AraC-like ligand binding domain KY998_11635 PF12833 Helix-turn-helix domain KY998_11640 PF04616 Glycosyl hydrolases family 43 KY998_11640 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KY998_11645 PF04616 Glycosyl hydrolases family 43 KY998_11645 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain KY998_11650 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_11655 PF07681 DoxX KY998_11660 PF01638 HxlR-like helix-turn-helix KY998_11675 PF00367 phosphotransferase system, EIIB KY998_11675 PF02378 Phosphotransferase system, EIIC KY998_11680 PF01418 Helix-turn-helix domain, rpiR family KY998_11680 PF01380 SIS domain KY998_11685 PF02056 Family 4 glycosyl hydrolase KY998_11685 PF11975 Family 4 glycosyl hydrolase C-terminal domain KY998_11690 PF02694 Uncharacterised BCR, YnfA/UPF0060 family KY998_11695 PF01590 GAF domain KY998_11695 PF02954 Bacterial regulatory protein, Fis family KY998_11695 PF00158 Sigma-54 interaction domain KY998_11700 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_11700 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain KY998_11710 PF02779 Transketolase, pyrimidine binding domain KY998_11710 PF02780 Transketolase, C-terminal domain KY998_11725 PF10057 Uncharacterized conserved protein (DUF2294) KY998_11730 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KY998_11730 PF00361 Proton-conducting membrane transporter KY998_11735 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) KY998_11745 PF03123 CAT RNA binding domain KY998_11745 PF00874 PRD domain KY998_11750 PF02378 Phosphotransferase system, EIIC KY998_11750 PF00367 phosphotransferase system, EIIB KY998_11760 PF07690 Major Facilitator Superfamily KY998_11765 PF10925 Protein of unknown function (DUF2680) KY998_11770 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase KY998_11795 PF01938 TRAM domain KY998_11795 PF05958 tRNA (Uracil-5-)-methyltransferase KY998_11800 PF00730 HhH-GPD superfamily base excision DNA repair protein KY998_11815 PF00465 Iron-containing alcohol dehydrogenase KY998_11830 PF04055 Radical SAM superfamily KY998_11830 PF08756 YfkB-like domain KY998_11835 PF14167 YfkD-like protein KY998_11840 PF01699 Sodium/calcium exchanger protein KY998_11850 PF07690 Major Facilitator Superfamily KY998_11855 PF03631 Virulence factor BrkB KY998_11865 PF01451 Low molecular weight phosphotyrosine protein phosphatase KY998_11870 PF01235 Sodium:alanine symporter family KY998_11875 PF06569 Protein of unknown function (DUF1128) KY998_11880 PF01965 DJ-1/PfpI family KY998_11885 PF00149 Calcineurin-like phosphoesterase KY998_11885 PF02872 5'-nucleotidase, C-terminal domain KY998_11890 PF00881 Nitroreductase family KY998_11895 PF01638 HxlR-like helix-turn-helix KY998_11905 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY998_11905 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY998_11905 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY998_11910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_11910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_11915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KY998_11920 PF13181 Tetratricopeptide repeat KY998_11920 PF00535 Glycosyl transferase family 2 KY998_11925 PF00535 Glycosyl transferase family 2 KY998_11935 PF01370 NAD dependent epimerase/dehydratase family KY998_11940 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_11945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KY998_11965 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_11970 PF07702 UTRA domain KY998_11970 PF00392 Bacterial regulatory proteins, gntR family KY998_11980 PF00367 phosphotransferase system, EIIB KY998_11980 PF02378 Phosphotransferase system, EIIC KY998_11985 PF01235 Sodium:alanine symporter family KY998_11990 PF09350 Domain of unknown function (DUF1992) KY998_11995 PF00884 Sulfatase KY998_12000 PF00557 Metallopeptidase family M24 KY998_12010 PF11121 Protein of unknown function (DUF2639) KY998_12020 PF00708 Acylphosphatase KY998_12025 PF01022 Bacterial regulatory protein, arsR family KY998_12030 PF13630 SdpI/YhfL protein family KY998_12030 PF07853 Protein of unknown function (DUF1648) KY998_12035 PF00704 Glycosyl hydrolases family 18 KY998_12040 PF02898 Nitric oxide synthase, oxygenase domain KY998_12050 PF00753 Metallo-beta-lactamase superfamily KY998_12075 PF00005 ABC transporter KY998_12085 PF00939 Sodium:sulfate symporter transmembrane region KY998_12090 PF11181 Heat induced stress protein YflT KY998_12095 PF11486 Protein of unknown function (DUF3212) KY998_12100 PF16884 N-terminal domain of oxidoreductase KY998_12100 PF00107 Zinc-binding dehydrogenase KY998_12115 PF07690 Major Facilitator Superfamily KY998_12120 PF13411 MerR HTH family regulatory protein KY998_12130 PF00067 Cytochrome P450 KY998_12135 PF06968 Biotin and Thiamin Synthesis associated domain KY998_12135 PF04055 Radical SAM superfamily KY998_12145 PF00155 Aminotransferase class I and II KY998_12150 PF00202 Aminotransferase class-III KY998_12155 PF03744 6-carboxyhexanoate--CoA ligase KY998_12160 PF02492 CobW/HypB/UreG, nucleotide-binding domain KY998_12160 PF07683 Cobalamin synthesis protein cobW C-terminal domain KY998_12175 PF02649 Type I GTP cyclohydrolase folE2 KY998_12180 PF01022 Bacterial regulatory protein, arsR family KY998_12185 PF01965 DJ-1/PfpI family KY998_12190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_12190 PF03466 LysR substrate binding domain KY998_12195 PF00005 ABC transporter KY998_12195 PF16326 ABC transporter C-terminal domain KY998_12195 PF12848 ABC transporter KY998_12205 PF00440 Bacterial regulatory proteins, tetR family KY998_12210 PF01040 UbiA prenyltransferase family KY998_12215 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_12250 PF01381 Helix-turn-helix KY998_12255 PF01709 Transcriptional regulator KY998_12260 PF00892 EamA-like transporter family KY998_12265 PF00155 Aminotransferase class I and II KY998_12265 PF00392 Bacterial regulatory proteins, gntR family KY998_12270 PF00892 EamA-like transporter family KY998_12280 PF13087 AAA domain KY998_12280 PF13091 PLD-like domain KY998_12300 PF00874 PRD domain KY998_12300 PF03123 CAT RNA binding domain KY998_12310 PF00145 C-5 cytosine-specific DNA methylase KY998_12345 PF01156 Inosine-uridine preferring nucleoside hydrolase KY998_12350 PF13302 Acetyltransferase (GNAT) domain KY998_12360 PF00873 AcrB/AcrD/AcrF family KY998_12365 PF00440 Bacterial regulatory proteins, tetR family KY998_12370 PF02156 Glycosyl hydrolase family 26 KY998_12385 PF02934 GatB/GatE catalytic domain KY998_12385 PF02637 GatB domain KY998_12390 PF01425 Amidase KY998_12395 PF02686 Glu-tRNAGln amidotransferase C subunit KY998_12400 PF00474 Sodium:solute symporter family KY998_12405 PF02308 MgtC family KY998_12415 PF01168 Alanine racemase, N-terminal domain KY998_12420 PF01676 Metalloenzyme superfamily KY998_12425 PF00155 Aminotransferase class I and II KY998_12430 PF02126 Phosphotriesterase family KY998_12435 PF10797 Protein of unknown function KY998_12440 PF10941 Protein of unknown function DUF2620 KY998_12450 PF14502 Helix-turn-helix domain KY998_12450 PF14503 YhfZ C-terminal domain KY998_12455 PF07537 CamS sex pheromone cAM373 precursor KY998_12460 PF00533 BRCA1 C Terminus (BRCT) domain KY998_12460 PF01653 NAD-dependent DNA ligase adenylation domain KY998_12460 PF03120 NAD-dependent DNA ligase OB-fold domain KY998_12460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain KY998_12460 PF12826 Helix-hairpin-helix motif KY998_12465 PF00580 UvrD/REP helicase N-terminal domain KY998_12465 PF13361 UvrD-like helicase C-terminal domain KY998_12470 PF01884 PcrB family KY998_12475 PF01371 Trp repressor protein KY998_12480 PF11258 Protein of unknown function (DUF3048) N-terminal domain KY998_12480 PF17479 Protein of unknown function (DUF3048) C-terminal domain KY998_12485 PF01979 Amidohydrolase family KY998_12485 PF13382 Adenine deaminase C-terminal domain KY998_12490 PF11127 Protein of unknown function (DUF2892) KY998_12510 PF00067 Cytochrome P450 KY998_12520 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KY998_12520 PF02843 Phosphoribosylglycinamide synthetase, C domain KY998_12520 PF02844 Phosphoribosylglycinamide synthetase, N domain KY998_12525 PF01808 AICARFT/IMPCHase bienzyme KY998_12525 PF02142 MGS-like domain KY998_12535 PF02769 AIR synthase related protein, C-terminal domain KY998_12535 PF00586 AIR synthase related protein, N-terminal domain KY998_12540 PF00156 Phosphoribosyl transferase domain KY998_12545 PF00586 AIR synthase related protein, N-terminal domain KY998_12545 PF02769 AIR synthase related protein, C-terminal domain KY998_12545 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain KY998_12555 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase KY998_12560 PF01259 SAICAR synthetase KY998_12565 PF10397 Adenylosuccinate lyase C-terminus KY998_12565 PF00206 Lyase KY998_12570 PF02222 ATP-grasp domain KY998_12570 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain KY998_12575 PF00731 AIR carboxylase KY998_12580 PF14044 NETI protein KY998_12585 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_12590 PF13076 Fur-regulated basic protein A KY998_12600 PF00860 Permease family KY998_12610 PF02540 NAD synthase KY998_12610 PF00117 Glutamine amidotransferase class-I KY998_12610 PF00958 GMP synthase C terminal domain KY998_12615 PF01841 Transglutaminase-like superfamily KY998_12615 PF11992 Domain of unknown function (DUF3488) KY998_12615 PF13559 Domain of unknown function (DUF4129) KY998_12620 PF01882 Protein of unknown function DUF58 KY998_12625 PF07726 ATPase family associated with various cellular activities (AAA) KY998_12625 PF17863 AAA lid domain KY998_12630 PF01545 Cation efflux family KY998_12630 PF16916 Dimerisation domain of Zinc Transporter KY998_12650 PF07731 Multicopper oxidase KY998_12650 PF07732 Multicopper oxidase KY998_12650 PF00394 Multicopper oxidase KY998_12655 PF12833 Helix-turn-helix domain KY998_12660 PF13460 NAD(P)H-binding KY998_12680 PF13170 Protein of unknown function (DUF4003) KY998_12685 PF07676 WD40-like Beta Propeller Repeat KY998_12690 PF03330 Lytic transglycolase KY998_12705 PF01047 MarR family KY998_12710 PF01479 S4 domain KY998_12710 PF00579 tRNA synthetases class I (W and Y) KY998_12715 PF13419 Haloacid dehalogenase-like hydrolase KY998_12720 PF00128 Alpha amylase, catalytic domain KY998_12720 PF16657 Maltogenic Amylase, C-terminal domain KY998_12725 PF03633 Glycosyl hydrolase family 65, C-terminal domain KY998_12725 PF03632 Glycosyl hydrolase family 65 central catalytic domain KY998_12725 PF03636 Glycosyl hydrolase family 65, N-terminal domain KY998_12730 PF06691 Protein of unknown function (DUF1189) KY998_12735 PF00528 Binding-protein-dependent transport system inner membrane component KY998_12740 PF00528 Binding-protein-dependent transport system inner membrane component KY998_12745 PF13416 Bacterial extracellular solute-binding protein KY998_12750 PF02903 Alpha amylase, N-terminal ig-like domain KY998_12750 PF00128 Alpha amylase, catalytic domain KY998_12765 PF00128 Alpha amylase, catalytic domain KY998_12765 PF09154 Domain of unknown function (DUF1939) KY998_12770 PF11738 Protein of unknown function (DUF3298) KY998_12770 PF13739 Deacetylase PdaC KY998_12770 PF01522 Polysaccharide deacetylase KY998_12800 PF01098 Cell cycle protein KY998_12805 PF06803 Protein of unknown function (DUF1232) KY998_12810 PF01810 LysE type translocator KY998_12815 PF11495 Archaeal transcriptional regulator TrmB KY998_12815 PF01978 Sugar-specific transcriptional regulator TrmB KY998_12830 PF04536 TPM domain KY998_12835 PF08271 TFIIB zinc-binding KY998_12840 PF04012 PspA/IM30 family KY998_12845 PF07690 Major Facilitator Superfamily KY998_12850 PF00135 Carboxylesterase family KY998_12855 PF00106 short chain dehydrogenase KY998_12875 PF17933 Tetracyclin repressor-like, C-terminal domain KY998_12875 PF00440 Bacterial regulatory proteins, tetR family KY998_12900 PF10787 Uncharacterised protein from bacillus cereus group KY998_12905 PF04294 VanW like protein KY998_12915 PF00118 TCP-1/cpn60 chaperonin family KY998_12920 PF00166 Chaperonin 10 Kd subunit KY998_12925 PF02517 CPBP intramembrane metalloprotease KY998_12930 PF14146 Domain of unknown function (DUF4305) KY998_12935 PF00902 Sec-independent protein translocase protein (TatC) KY998_12940 PF02416 mttA/Hcf106 family KY998_12950 PF01967 MoaC family KY998_12960 PF00814 Glycoprotease family KY998_12965 PF00583 Acetyltransferase (GNAT) family KY998_12970 PF00814 Glycoprotease family KY998_12975 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE KY998_12980 PF00586 AIR synthase related protein, N-terminal domain KY998_12980 PF02769 AIR synthase related protein, C-terminal domain KY998_13020 PF00083 Sugar (and other) transporter KY998_13025 PF04203 Sortase domain KY998_13030 PF17210 SdrD B-like domain KY998_13030 PF04650 YSIRK type signal peptide KY998_13030 PF17961 Bacterial Ig domain KY998_13030 PF00746 LPXTG cell wall anchor motif KY998_13030 PF10425 C-terminus of bacterial fibrinogen-binding adhesin KY998_13035 PF00072 Response regulator receiver domain KY998_13035 PF04397 LytTr DNA-binding domain KY998_13050 PF06580 Histidine kinase KY998_13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_13055 PF00465 Iron-containing alcohol dehydrogenase KY998_13065 PF00293 NUDIX domain KY998_13070 PF01757 Acyltransferase family KY998_13075 PF13739 Deacetylase PdaC KY998_13075 PF11738 Protein of unknown function (DUF3298) KY998_13080 PF04542 Sigma-70 region 2 KY998_13080 PF08281 Sigma-70, region 4 KY998_13090 PF00561 alpha/beta hydrolase fold KY998_13095 PF08859 DGC domain KY998_13105 PF00324 Amino acid permease KY998_13110 PF04199 Putative cyclase KY998_13120 PF01638 HxlR-like helix-turn-helix KY998_13125 PF06821 Serine hydrolase KY998_13130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_13130 PF03466 LysR substrate binding domain KY998_13150 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_13150 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_13155 PF01638 HxlR-like helix-turn-helix KY998_13165 PF04299 Putative FMN-binding domain KY998_13170 PF00583 Acetyltransferase (GNAT) family KY998_13175 PF01047 MarR family KY998_13205 PF00313 'Cold-shock' DNA-binding domain KY998_13210 PF00487 Fatty acid desaturase KY998_13215 PF00457 Glycosyl hydrolases family 11 KY998_13240 PF00589 Phage integrase family KY998_13240 PF14659 Phage integrase, N-terminal SAM-like domain KY998_13280 PF10263 SprT-like family KY998_13300 PF00440 Bacterial regulatory proteins, tetR family KY998_13305 PF17674 HHH domain KY998_13305 PF00575 S1 RNA binding domain KY998_13305 PF09371 Tex-like protein N-terminal domain KY998_13305 PF16921 Tex protein YqgF-like domain KY998_13310 PF07228 Stage II sporulation protein E (SpoIIE) KY998_13315 PF04539 Sigma-70 region 3 KY998_13315 PF04545 Sigma-70, region 4 KY998_13315 PF04542 Sigma-70 region 2 KY998_13320 PF13581 Histidine kinase-like ATPase domain KY998_13325 PF01740 STAS domain KY998_13330 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain KY998_13330 PF07228 Stage II sporulation protein E (SpoIIE) KY998_13335 PF13581 Histidine kinase-like ATPase domain KY998_13340 PF01740 STAS domain KY998_13345 PF01740 STAS domain KY998_13345 PF08678 Rsbr N terminal KY998_13350 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system KY998_13355 PF01402 Ribbon-helix-helix protein, copG family KY998_13360 PF01168 Alanine racemase, N-terminal domain KY998_13360 PF00842 Alanine racemase, C-terminal domain KY998_13370 PF01694 Rhomboid family KY998_13375 PF03703 Bacterial PH domain KY998_13380 PF03703 Bacterial PH domain KY998_13385 PF00270 DEAD/DEAH box helicase KY998_13385 PF00271 Helicase conserved C-terminal domain KY998_13390 PF12146 Serine aminopeptidase, S33 KY998_13395 PF01225 Mur ligase family, catalytic domain KY998_13395 PF02875 Mur ligase family, glutamate ligase domain KY998_13395 PF08245 Mur ligase middle domain KY998_13400 PF07478 D-ala D-ala ligase C-terminus KY998_13400 PF01820 D-ala D-ala ligase N-terminus KY998_13405 PF00085 Thioredoxin KY998_13415 PF13040 Fur-regulated basic protein B KY998_13420 PF08028 Acyl-CoA dehydrogenase, C-terminal domain KY998_13420 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_13420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_13435 PF00005 ABC transporter KY998_13440 PF00375 Sodium:dicarboxylate symporter family KY998_13445 PF01594 AI-2E family transporter KY998_13455 PF07883 Cupin domain KY998_13465 PF12787 EcsC protein family KY998_13470 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KY998_13480 PF10415 Fumarase C C-terminus KY998_13480 PF00206 Lyase KY998_13485 PF04226 Transglycosylase associated protein KY998_13490 PF01566 Natural resistance-associated macrophage protein KY998_13495 PF13302 Acetyltransferase (GNAT) domain KY998_13515 PF01817 Chorismate mutase type II KY998_13520 PF00425 chorismate binding enzyme KY998_13520 PF00117 Glutamine amidotransferase class-I KY998_13520 PF04715 Anthranilate synthase component I, N terminal region KY998_13525 PF02153 Prephenate dehydrogenase KY998_13530 PF01131 DNA topoisomerase KY998_13530 PF01751 Toprim domain KY998_13535 PF01037 Lrp/AsnC ligand binding domain KY998_13545 PF12823 Domain of unknown function (DUF3817) KY998_13550 PF03816 Cell envelope-related transcriptional attenuator domain KY998_13555 PF10997 Alternate to MurJ KY998_13560 PF16242 Pyridoxamine 5'-phosphate oxidase like KY998_13580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_13580 PF08279 HTH domain KY998_13580 PF00874 PRD domain KY998_13580 PF05043 Mga helix-turn-helix domain KY998_13580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_13585 PF01232 Mannitol dehydrogenase Rossmann domain KY998_13585 PF08125 Mannitol dehydrogenase C-terminal domain KY998_13590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_13595 PF02378 Phosphotransferase system, EIIC KY998_13595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_13600 PF13472 GDSL-like Lipase/Acylhydrolase family KY998_13605 PF09339 IclR helix-turn-helix domain KY998_13605 PF01614 Bacterial transcriptional regulator KY998_13610 PF02626 Carboxyltransferase domain, subdomain A and B KY998_13615 PF02682 Carboxyltransferase domain, subdomain C and D KY998_13620 PF07286 Protein of unknown function (DUF1445) KY998_13625 PF01566 Natural resistance-associated macrophage protein KY998_13630 PF03746 LamB/YcsF family KY998_13640 PF02779 Transketolase, pyrimidine binding domain KY998_13640 PF02780 Transketolase, C-terminal domain KY998_13645 PF00456 Transketolase, thiamine diphosphate binding domain KY998_13660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_13665 PF01980 tRNA-methyltransferase O KY998_13670 PF07977 FabA-like domain KY998_13675 PF00939 Sodium:sulfate symporter transmembrane region KY998_13680 PF07729 FCD domain KY998_13680 PF00392 Bacterial regulatory proteins, gntR family KY998_13685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KY998_13690 PF00355 Rieske [2Fe-2S] domain KY998_13695 PF04324 BFD-like [2Fe-2S] binding domain KY998_13695 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_13695 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KY998_13695 PF01077 Nitrite and sulphite reductase 4Fe-4S domain KY998_13695 PF18267 Rubredoxin NAD+ reductase C-terminal domain KY998_13705 PF18267 Rubredoxin NAD+ reductase C-terminal domain KY998_13705 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_13705 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain KY998_13705 PF04324 BFD-like [2Fe-2S] binding domain KY998_13710 PF05573 NosL KY998_13710 PF08220 DeoR-like helix-turn-helix domain KY998_13715 PF05425 Copper resistance protein D KY998_13715 PF13115 YtkA-like KY998_13715 PF04234 CopC domain KY998_13720 PF07987 Domain of unkown function (DUF1775) KY998_13730 PF00892 EamA-like transporter family KY998_13735 PF00171 Aldehyde dehydrogenase family KY998_13745 PF00202 Aminotransferase class-III KY998_13755 PF01022 Bacterial regulatory protein, arsR family KY998_13760 PF03992 Antibiotic biosynthesis monooxygenase KY998_13765 PF00881 Nitroreductase family KY998_13775 PF00440 Bacterial regulatory proteins, tetR family KY998_13780 PF07690 Major Facilitator Superfamily KY998_13785 PF01497 Periplasmic binding protein KY998_13795 PF01032 FecCD transport family KY998_13805 PF00696 Amino acid kinase family KY998_13805 PF13840 ACT domain KY998_13810 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_13810 PF00672 HAMP domain KY998_13810 PF12729 Four helix bundle sensory module for signal transduction KY998_13825 PF12704 MacB-like periplasmic core domain KY998_13825 PF02687 FtsX-like permease family KY998_13835 PF07739 TipAS antibiotic-recognition domain KY998_13835 PF13411 MerR HTH family regulatory protein KY998_13840 PF03845 Spore germination protein KY998_13845 PF05504 Spore germination B3/ GerAC like, C-terminal KY998_13850 PF03323 Bacillus/Clostridium GerA spore germination protein KY998_13865 PF12708 Pectate lyase superfamily protein KY998_13865 PF13229 Right handed beta helix region KY998_13870 PF00854 POT family KY998_13880 PF02333 Phytase KY998_13890 PF02449 Beta-galactosidase KY998_13890 PF08533 Beta-galactosidase C-terminal domain KY998_13890 PF08532 Beta-galactosidase trimerisation domain KY998_13895 PF00583 Acetyltransferase (GNAT) family KY998_13895 PF01047 MarR family KY998_13900 PF07690 Major Facilitator Superfamily KY998_13905 PF02653 Branched-chain amino acid transport system / permease component KY998_13915 PF13407 Periplasmic binding protein domain KY998_13925 PF02743 Cache domain KY998_13925 PF00672 HAMP domain KY998_13925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_13925 PF06580 Histidine kinase KY998_14000 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase KY998_14005 PF02441 Flavoprotein KY998_14015 PF00491 Arginase family KY998_14020 PF00324 Amino acid permease KY998_14025 PF00202 Aminotransferase class-III KY998_14030 PF02954 Bacterial regulatory protein, Fis family KY998_14030 PF13426 PAS domain KY998_14030 PF00158 Sigma-54 interaction domain KY998_14040 PF00528 Binding-protein-dependent transport system inner membrane component KY998_14050 PF00672 HAMP domain KY998_14050 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_14050 PF02743 Cache domain KY998_14070 PF06445 GyrI-like small molecule binding domain KY998_14070 PF12833 Helix-turn-helix domain KY998_14075 PF00756 Putative esterase KY998_14080 PF01648 4'-phosphopantetheinyl transferase superfamily KY998_14085 PF00392 Bacterial regulatory proteins, gntR family KY998_14085 PF00155 Aminotransferase class I and II KY998_14090 PF00892 EamA-like transporter family KY998_14095 PF00975 Thioesterase domain KY998_14105 PF00501 AMP-binding enzyme KY998_14105 PF13193 AMP-binding enzyme C-terminal domain KY998_14105 PF00550 Phosphopantetheine attachment site KY998_14105 PF00668 Condensation domain KY998_14115 PF00528 Binding-protein-dependent transport system inner membrane component KY998_14120 PF00528 Binding-protein-dependent transport system inner membrane component KY998_14125 PF00005 ABC transporter KY998_14125 PF08402 TOBE domain KY998_14135 PF02538 Hydantoinase B/oxoprolinase KY998_14145 PF04740 LXG domain of WXG superfamily KY998_14145 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues KY998_14145 PF14449 Pre-toxin TG KY998_14150 PF03793 PASTA domain KY998_14150 PF00069 Protein kinase domain KY998_14160 PF14040 Deoxyribonuclease NucA/NucB KY998_14165 PF11033 Competence protein J (ComJ) KY998_14170 PF00232 Glycosyl hydrolase family 1 KY998_14175 PF00005 ABC transporter KY998_14180 PF02525 Flavodoxin-like fold KY998_14185 PF00497 Bacterial extracellular solute-binding proteins, family 3 KY998_14190 PF00528 Binding-protein-dependent transport system inner membrane component KY998_14215 PF05448 Acetyl xylan esterase (AXE1) KY998_14220 PF03773 Predicted permease KY998_14225 PF09323 Domain of unknown function (DUF1980) KY998_14235 PF00474 Sodium:solute symporter family KY998_14240 PF00171 Aldehyde dehydrogenase family KY998_14245 PF01619 Proline dehydrogenase KY998_14250 PF10127 RNA repair pathway DNA polymerase beta family KY998_14255 PF01202 Shikimate kinase KY998_14260 PF02540 NAD synthase KY998_14265 PF00324 Amino acid permease KY998_14270 PF01810 LysE type translocator KY998_14275 PF02652 L-lactate permease KY998_14280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KY998_14280 PF00056 lactate/malate dehydrogenase, NAD binding domain KY998_14285 PF07690 Major Facilitator Superfamily KY998_14295 PF02683 Cytochrome C biogenesis protein transmembrane region KY998_14300 PF05816 Toxic anion resistance protein (TelA) KY998_14305 PF14266 Putative component of 'biosynthetic module' KY998_14320 PF03741 Integral membrane protein TerC family KY998_14325 PF02342 TerD domain KY998_14330 PF02342 TerD domain KY998_14335 PF02342 TerD domain KY998_14355 PF00440 Bacterial regulatory proteins, tetR family KY998_14355 PF17932 Tetracyclin repressor-like, C-terminal domain KY998_14360 PF00005 ABC transporter KY998_14360 PF13732 Domain of unknown function (DUF4162) KY998_14370 PF00877 NlpC/P60 family KY998_14380 PF07486 Cell Wall Hydrolase KY998_14385 PF00581 Rhodanese-like domain KY998_14390 PF16244 Domain of unknown function (DUF4901) KY998_14405 PF00089 Trypsin KY998_14410 PF06483 Chitinase C KY998_14410 PF00704 Glycosyl hydrolases family 18 KY998_14415 PF00041 Fibronectin type III domain KY998_14415 PF00704 Glycosyl hydrolases family 18 KY998_14420 PF04794 YdjC-like protein KY998_14425 PF07702 UTRA domain KY998_14425 PF00392 Bacterial regulatory proteins, gntR family KY998_14430 PF02056 Family 4 glycosyl hydrolase KY998_14430 PF11975 Family 4 glycosyl hydrolase C-terminal domain KY998_14435 PF02378 Phosphotransferase system, EIIC KY998_14440 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KY998_14445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_14450 PF01565 FAD binding domain KY998_14450 PF02913 FAD linked oxidases, C-terminal domain KY998_14455 PF02754 Cysteine-rich domain KY998_14455 PF13183 4Fe-4S dicluster domain KY998_14465 PF04226 Transglycosylase associated protein KY998_14470 PF01432 Peptidase family M3 KY998_14470 PF08439 Oligopeptidase F KY998_14475 PF01425 Amidase KY998_14480 PF00583 Acetyltransferase (GNAT) family KY998_14485 PF00710 Asparaginase, N-terminal KY998_14485 PF17763 Glutaminase/Asparaginase C-terminal domain KY998_14500 PF17118 Domain of unknown function (DUF5105) KY998_14500 PF11611 Domain of unknown function (DUF4352) KY998_14515 PF14552 Tautomerase enzyme KY998_14525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_14525 PF00512 His Kinase A (phospho-acceptor) domain KY998_14530 PF00072 Response regulator receiver domain KY998_14530 PF00486 Transcriptional regulatory protein, C terminal KY998_14550 PF05225 helix-turn-helix, Psq domain KY998_14550 PF02810 SEC-C motif KY998_14560 PF00892 EamA-like transporter family KY998_14565 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein KY998_14575 PF13847 Methyltransferase domain KY998_14575 PF03551 Transcriptional regulator PadR-like family KY998_14585 PF13411 MerR HTH family regulatory protein KY998_14585 PF07739 TipAS antibiotic-recognition domain KY998_14605 PF00501 AMP-binding enzyme KY998_14605 PF13193 AMP-binding enzyme C-terminal domain KY998_14610 PF01047 MarR family KY998_14620 PF16226 Domain of unknown function (DUF4885) KY998_14625 PF13039 Protein of unknown function (DUF3900) KY998_14625 PF13037 Domain of unknown function (DUF3898) KY998_14640 PF00005 ABC transporter KY998_14645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_14645 PF00512 His Kinase A (phospho-acceptor) domain KY998_14650 PF00486 Transcriptional regulatory protein, C terminal KY998_14650 PF00072 Response regulator receiver domain KY998_14670 PF08666 SAF domain KY998_14670 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KY998_14675 PF00392 Bacterial regulatory proteins, gntR family KY998_14675 PF07729 FCD domain KY998_14680 PF13378 Enolase C-terminal domain-like KY998_14685 PF07690 Major Facilitator Superfamily KY998_14695 PF00701 Dihydrodipicolinate synthetase family KY998_14700 PF00902 Sec-independent protein translocase protein (TatC) KY998_14705 PF02416 mttA/Hcf106 family KY998_14710 PF09423 PhoD-like phosphatase KY998_14710 PF16655 PhoD-like phosphatase, N-terminal domain KY998_14720 PF03965 Penicillinase repressor KY998_14725 PF05569 BlaR1 peptidase M56 KY998_14725 PF00905 Penicillin binding protein transpeptidase domain KY998_14730 PF13302 Acetyltransferase (GNAT) domain KY998_14735 PF00072 Response regulator receiver domain KY998_14735 PF08664 YcbB domain KY998_14740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_14745 PF04960 Glutaminase KY998_14750 PF01235 Sodium:alanine symporter family KY998_14755 PF10990 Protein of unknown function (DUF2809) KY998_14760 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_14760 PF00101 Ribulose bisphosphate carboxylase, small chain KY998_14770 PF13411 MerR HTH family regulatory protein KY998_14770 PF07739 TipAS antibiotic-recognition domain KY998_14780 PF04794 YdjC-like protein KY998_14785 PF02574 Homocysteine S-methyltransferase KY998_14790 PF00324 Amino acid permease KY998_14795 PF10710 Protein of unknown function (DUF2512) KY998_14815 PF00465 Iron-containing alcohol dehydrogenase KY998_14845 PF12833 Helix-turn-helix domain KY998_14845 PF02311 AraC-like ligand binding domain KY998_14850 PF00892 EamA-like transporter family KY998_14860 PF08924 Domain of unknown function (DUF1906) KY998_14860 PF01471 Putative peptidoglycan binding domain KY998_14870 PF05360 yiaA/B two helix domain KY998_14875 PF02690 Na+/Pi-cotransporter KY998_14895 PF01925 Sulfite exporter TauE/SafE KY998_14900 PF07729 FCD domain KY998_14900 PF00392 Bacterial regulatory proteins, gntR family KY998_14910 PF00282 Pyridoxal-dependent decarboxylase conserved domain KY998_14915 PF08241 Methyltransferase domain KY998_14925 PF03190 Protein of unknown function, DUF255 KY998_14935 PF17340 Family of unknown function (DUF5370) KY998_14940 PF17334 Minor curli fiber component A KY998_14945 PF07690 Major Facilitator Superfamily KY998_14955 PF03466 LysR substrate binding domain KY998_14955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_14965 PF13419 Haloacid dehalogenase-like hydrolase KY998_14975 PF04439 Streptomycin adenylyltransferase KY998_14985 PF05139 Erythromycin esterase KY998_14995 PF01323 DSBA-like thioredoxin domain KY998_15000 PF00664 ABC transporter transmembrane region KY998_15000 PF00005 ABC transporter KY998_15010 PF07690 Major Facilitator Superfamily KY998_15025 PF00376 MerR family regulatory protein KY998_15025 PF09278 MerR, DNA binding KY998_15035 PF00392 Bacterial regulatory proteins, gntR family KY998_15055 PF01380 SIS domain KY998_15060 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III KY998_15060 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I KY998_15060 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain KY998_15060 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II KY998_15065 PF07949 YbbR-like protein KY998_15070 PF02457 DisA bacterial checkpoint controller nucleotide-binding KY998_15075 PF13490 Putative zinc-finger KY998_15080 PF04542 Sigma-70 region 2 KY998_15080 PF08281 Sigma-70, region 4 KY998_15085 PF00491 Arginase family KY998_15115 PF04463 Protein of unknown function (DUF523) KY998_15120 PF01380 SIS domain KY998_15125 PF01418 Helix-turn-helix domain, rpiR family KY998_15125 PF01380 SIS domain KY998_15135 PF00144 Beta-lactamase KY998_15140 PF00933 Glycosyl hydrolase family 3 N terminal domain KY998_15140 PF01915 Glycosyl hydrolase family 3 C-terminal domain KY998_15145 PF07075 Protein of unknown function (DUF1343) KY998_15150 PF02567 Phenazine biosynthesis-like protein KY998_15155 PF17369 Family of unknown function (DUF5391) KY998_15160 PF01758 Sodium Bile acid symporter family KY998_15200 PF01522 Polysaccharide deacetylase KY998_15205 PF14089 KinB-signalling pathway activation in sporulation KY998_15210 PF17898 Spore germination GerD central core domain KY998_15215 PF10609 NUBPL iron-transfer P-loop NTPase KY998_15220 PF01520 N-acetylmuramoyl-L-alanine amidase KY998_15225 PF10730 Protein of unknown function (DUF2521) KY998_15245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KY998_15245 PF17203 Single cache domain 3 KY998_15245 PF00989 PAS fold KY998_15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_15315 PF00005 ABC transporter KY998_15330 PF00082 Subtilase family KY998_15335 PF05163 DinB family KY998_15355 PF00589 Phage integrase family KY998_15355 PF14659 Phage integrase, N-terminal SAM-like domain KY998_15360 PF00380 Ribosomal protein S9/S16 KY998_15365 PF00572 Ribosomal protein L13 KY998_15370 PF01416 tRNA pseudouridine synthase KY998_15375 PF02361 Cobalt transport protein KY998_15380 PF00005 ABC transporter KY998_15390 PF01196 Ribosomal protein L17 KY998_15395 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain KY998_15395 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain KY998_15395 PF01000 RNA polymerase Rpb3/RpoA insert domain KY998_15400 PF00411 Ribosomal protein S11 KY998_15405 PF00416 Ribosomal protein S13/S18 KY998_15410 PF00444 Ribosomal protein L36 KY998_15415 PF01176 Translation initiation factor 1A / IF-1 KY998_15425 PF00557 Metallopeptidase family M24 KY998_15430 PF05191 Adenylate kinase, active site lid KY998_15435 PF00344 SecY translocase KY998_15440 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A KY998_15445 PF00327 Ribosomal protein L30p/L7e KY998_15450 PF00333 Ribosomal protein S5, N-terminal domain KY998_15450 PF03719 Ribosomal protein S5, C-terminal domain KY998_15455 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast KY998_15460 PF00347 Ribosomal protein L6 KY998_15465 PF00410 Ribosomal protein S8 KY998_15470 PF00253 Ribosomal protein S14p/S29e KY998_15475 PF00281 Ribosomal protein L5 KY998_15475 PF00673 ribosomal L5P family C-terminus KY998_15480 PF00467 KOW motif KY998_15480 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 KY998_15485 PF00238 Ribosomal protein L14p/L23e KY998_15490 PF00366 Ribosomal protein S17 KY998_15495 PF00831 Ribosomal L29 protein KY998_15500 PF00252 Ribosomal protein L16p/L10e KY998_15505 PF07650 KH domain KY998_15505 PF00189 Ribosomal protein S3, C-terminal domain KY998_15510 PF00237 Ribosomal protein L22p/L17e KY998_15515 PF00203 Ribosomal protein S19 KY998_15520 PF03947 Ribosomal Proteins L2, C-terminal domain KY998_15520 PF00181 Ribosomal Proteins L2, RNA binding domain KY998_15525 PF00276 Ribosomal protein L23 KY998_15530 PF00573 Ribosomal protein L4/L1 family KY998_15535 PF00297 Ribosomal protein L3 KY998_15540 PF00338 Ribosomal protein S10p/S20e KY998_15545 PF00009 Elongation factor Tu GTP binding domain KY998_15545 PF03144 Elongation factor Tu domain 2 KY998_15545 PF03143 Elongation factor Tu C-terminal domain KY998_15550 PF03144 Elongation factor Tu domain 2 KY998_15550 PF03764 Elongation factor G, domain IV KY998_15550 PF14492 Elongation Factor G, domain II KY998_15550 PF00679 Elongation factor G C-terminus KY998_15550 PF00009 Elongation factor Tu GTP binding domain KY998_15555 PF00177 Ribosomal protein S7p/S5e KY998_15560 PF00164 Ribosomal protein S12/S23 KY998_15565 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family KY998_15570 PF04997 RNA polymerase Rpb1, domain 1 KY998_15570 PF00623 RNA polymerase Rpb1, domain 2 KY998_15570 PF04983 RNA polymerase Rpb1, domain 3 KY998_15570 PF04998 RNA polymerase Rpb1, domain 5 KY998_15570 PF05000 RNA polymerase Rpb1, domain 4 KY998_15575 PF04563 RNA polymerase beta subunit KY998_15575 PF04560 RNA polymerase Rpb2, domain 7 KY998_15575 PF04561 RNA polymerase Rpb2, domain 2 KY998_15575 PF10385 RNA polymerase beta subunit external 1 domain KY998_15575 PF04565 RNA polymerase Rpb2, domain 3 KY998_15575 PF00562 RNA polymerase Rpb2, domain 6 KY998_15580 PF05175 Methyltransferase small domain KY998_15585 PF00542 Ribosomal protein L7/L12 C-terminal domain KY998_15585 PF16320 Ribosomal protein L7/L12 dimerisation domain KY998_15590 PF00466 Ribosomal protein L10 KY998_15595 PF00687 Ribosomal protein L1p/L10e family KY998_15600 PF00298 Ribosomal protein L11, RNA binding domain KY998_15600 PF03946 Ribosomal protein L11, N-terminal domain KY998_15605 PF00467 KOW motif KY998_15605 PF02357 Transcription termination factor nusG KY998_15610 PF00584 SecE/Sec61-gamma subunits of protein translocation complex KY998_15615 PF00471 Ribosomal protein L33 KY998_15620 PF08281 Sigma-70, region 4 KY998_15620 PF04542 Sigma-70 region 2 KY998_15625 PF05991 YacP-like NYN domain KY998_15630 PF08032 RNA 2'-O ribose methyltransferase substrate binding KY998_15630 PF00588 SpoU rRNA Methylase family KY998_15640 PF01406 tRNA synthetases class I (C) catalytic domain KY998_15640 PF09190 DALR domain KY998_15645 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_15650 PF00749 tRNA synthetases class I (E and Q), catalytic domain KY998_15655 PF02542 YgbB family KY998_15660 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase KY998_15670 PF02457 DisA bacterial checkpoint controller nucleotide-binding KY998_15670 PF10635 DisA bacterial checkpoint controller linker region KY998_15675 PF18073 Rubredoxin metal binding domain KY998_15680 PF07724 AAA domain (Cdc48 subfamily) KY998_15680 PF00004 ATPase family associated with various cellular activities (AAA) KY998_15680 PF02861 Clp amino terminal domain, pathogenicity island component KY998_15680 PF17871 AAA lid domain KY998_15680 PF10431 C-terminal, D2-small domain, of ClpB protein KY998_15685 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain KY998_15690 PF02151 UvrB/uvrC motif KY998_15695 PF05848 CtsR N-terminal HTH domain KY998_15695 PF17727 CtsR C-terminal dimerization domain KY998_15775 PF01336 OB-fold nucleic acid binding domain KY998_15775 PF00152 tRNA synthetases class II (D, K and N) KY998_15780 PF01207 Dihydrouridine synthase (Dus) KY998_15785 PF01381 Helix-turn-helix KY998_15790 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) KY998_15795 PF02152 Dihydroneopterin aldolase KY998_15800 PF00809 Pterin binding enzyme KY998_15805 PF01063 Amino-transferase class IV KY998_15810 PF00117 Glutamine amidotransferase class-I KY998_15815 PF00425 chorismate binding enzyme KY998_15815 PF04715 Anthranilate synthase component I, N terminal region KY998_15825 PF13145 PPIC-type PPIASE domain KY998_15830 PF01430 Hsp33 protein KY998_15835 PF03309 Type III pantothenate kinase KY998_15840 PF06480 FtsH Extracellular KY998_15840 PF01434 Peptidase family M41 KY998_15840 PF00004 ATPase family associated with various cellular activities (AAA) KY998_15840 PF17862 AAA+ lid domain KY998_15845 PF00156 Phosphoribosyl transferase domain KY998_15850 PF01171 PP-loop family KY998_15850 PF09179 TilS substrate binding domain KY998_15850 PF11734 TilS substrate C-terminal domain KY998_15855 PF00069 Protein kinase domain KY998_15860 PF00092 von Willebrand factor type A domain KY998_15865 PF07228 Stage II sporulation protein E (SpoIIE) KY998_15880 PF00575 S1 RNA binding domain KY998_15885 PF04977 Septum formation initiator KY998_15890 PF09578 Spore cortex protein YabQ (Spore_YabQ) KY998_15905 PF03819 MazG nucleotide pyrophosphohydrolase domain KY998_15905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KY998_15910 PF01943 Polysaccharide biosynthesis protein KY998_15910 PF14667 Polysaccharide biosynthesis C-terminal domain KY998_15915 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KY998_15915 PF15714 Stage V sporulation protein T C-terminal, transcription factor KY998_15920 PF00270 DEAD/DEAH box helicase KY998_15920 PF00271 Helicase conserved C-terminal domain KY998_15920 PF17757 UvrB interaction domain KY998_15920 PF03461 TRCF domain KY998_15920 PF02559 CarD-like/TRCF domain KY998_15925 PF10955 Protein of unknown function (DUF2757) KY998_15930 PF01195 Peptidyl-tRNA hydrolase KY998_15935 PF14693 Ribosomal protein TL5, C-terminal domain KY998_15935 PF01386 Ribosomal L25p family KY998_15940 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase KY998_15940 PF14572 Phosphoribosyl synthetase-associated domain KY998_15945 PF00483 Nucleotidyl transferase KY998_15945 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_15950 PF04026 SpoVG KY998_15955 PF01042 Endoribonuclease L-PSP KY998_15960 PF00156 Phosphoribosyl transferase domain KY998_15960 PF09182 Bacterial purine repressor, N-terminal KY998_15965 PF08544 GHMP kinases C terminal KY998_15965 PF00288 GHMP kinases N terminal domain KY998_15970 PF00269 Small, acid-soluble spore proteins, alpha/beta type KY998_15975 PF06257 Biofilm formation stimulator VEG KY998_15980 PF05582 YabG peptidase U57 KY998_15985 PF00398 Ribosomal RNA adenine dimethylase KY998_15990 PF13331 Domain of unknown function (DUF4093) KY998_15990 PF13662 Toprim domain KY998_15995 PF06725 3D domain KY998_15995 PF03990 G5-linked-Ubiquitin-like domain KY998_15995 PF07501 G5 domain KY998_16000 PF01026 TatD related DNase KY998_16005 PF01588 Putative tRNA binding domain KY998_16005 PF09334 tRNA synthetases class I (M) KY998_16005 PF08264 Anticodon-binding domain of tRNA KY998_16010 PF18277 AbrB C-terminal domain KY998_16010 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KY998_16015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases KY998_16020 PF01541 GIY-YIG catalytic domain KY998_16025 PF05175 Methyltransferase small domain KY998_16030 PF06156 Initiation control protein YabA KY998_16035 PF04468 PSP1 C-terminal conserved region KY998_16045 PF03885 Protein of unknown function (DUF327) KY998_16050 PF06153 Cyclic-di-AMP receptor KY998_16055 PF02223 Thymidylate kinase KY998_16060 PF01276 Orn/Lys/Arg decarboxylase, major domain KY998_16060 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain KY998_16065 PF05816 Toxic anion resistance protein (TelA) KY998_16070 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein KY998_16075 PF10764 Inhibitor of sigma-G Gin KY998_16105 PF07441 SigmaK-factor processing regulatory protein BofA KY998_16110 PF10704 Protein of unknown function (DUF2508) KY998_16115 PF02132 RecR protein KY998_16115 PF13662 Toprim domain KY998_16120 PF02575 YbaB/EbfC DNA-binding family KY998_16125 PF12169 DNA polymerase III subunits gamma and tau domain III KY998_16135 PF14437 MafB19-like deaminase KY998_16140 PF00857 Isochorismatase family KY998_16145 PF00704 Glycosyl hydrolases family 18 KY998_16145 PF01476 LysM domain KY998_16150 PF01712 Deoxynucleoside kinase KY998_16155 PF01712 Deoxynucleoside kinase KY998_16170 PF05651 Putative sugar diacid recognition KY998_16170 PF17853 GGDEF-like domain KY998_16170 PF13556 PucR C-terminal helix-turn-helix domain KY998_16175 PF02447 GntP family permease KY998_16180 PF02595 Glycerate kinase family KY998_16185 PF02403 Seryl-tRNA synthetase N-terminal domain KY998_16185 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY998_16190 PF01174 SNO glutamine amidotransferase family KY998_16195 PF01680 SOR/SNZ family KY998_16200 PF07943 Penicillin-binding protein 5, C-terminal domain KY998_16200 PF00768 D-alanyl-D-alanine carboxypeptidase KY998_16205 PF00571 CBS domain KY998_16205 PF00478 IMP dehydrogenase / GMP reductase domain KY998_16210 PF14175 YaaC-like Protein KY998_16250 PF04025 Domain of unknown function (DUF370) KY998_16255 PF02463 RecF/RecN/SMC N terminal domain KY998_16265 PF02768 DNA polymerase III beta subunit, C-terminal domain KY998_16265 PF02767 DNA polymerase III beta subunit, central domain KY998_16265 PF00712 DNA polymerase III beta subunit, N-terminal domain KY998_16270 PF00308 Bacterial dnaA protein KY998_16270 PF08299 Bacterial dnaA protein helix-turn-helix KY998_16270 PF11638 DnaA N-terminal domain KY998_16275 PF00468 Ribosomal protein L34 KY998_16280 PF00825 Ribonuclease P KY998_16285 PF02096 60Kd inner membrane protein KY998_16290 PF01424 R3H domain KY998_16290 PF14804 Jag N-terminus KY998_16295 PF10396 GTP-binding protein TrmE N-terminus KY998_16295 PF12631 MnmE helical domain KY998_16295 PF01926 50S ribosome-binding GTPase KY998_16300 PF01134 Glucose inhibited division protein A KY998_16300 PF13932 GidA associated domain KY998_16305 PF02527 rRNA small subunit methyltransferase G KY998_16310 PF17762 HTH domain found in ParB protein KY998_16310 PF02195 ParB-like nuclease domain KY998_16315 PF04542 Sigma-70 region 2 KY998_16315 PF08281 Sigma-70, region 4 KY998_16315 PF12680 SnoaL-like domain KY998_16320 PF02627 Carboxymuconolactone decarboxylase family KY998_16325 PF13614 AAA domain KY998_16330 PF17762 HTH domain found in ParB protein KY998_16330 PF02195 ParB-like nuclease domain KY998_16335 PF06866 Protein of unknown function (DUF1256) KY998_16345 PF06107 Bacterial protein of unknown function (DUF951) KY998_16350 PF01926 50S ribosome-binding GTPase KY998_16350 PF06071 Protein of unknown function (DUF933) KY998_16355 PF01250 Ribosomal protein S6 KY998_16360 PF00436 Single-strand binding protein family KY998_16365 PF01084 Ribosomal protein S18 KY998_16370 PF07690 Major Facilitator Superfamily KY998_16375 PF00916 Sulfate permease family KY998_16375 PF01740 STAS domain KY998_16380 PF00582 Universal stress protein family KY998_16385 PF07875 Coat F domain KY998_16395 PF09991 Predicted membrane protein (DUF2232) KY998_16400 PF02272 DHHA1 domain KY998_16400 PF01368 DHH family KY998_16405 PF01281 Ribosomal protein L9, N-terminal domain KY998_16405 PF03948 Ribosomal protein L9, C-terminal domain KY998_16410 PF00367 phosphotransferase system, EIIB KY998_16410 PF02378 Phosphotransferase system, EIIC KY998_16415 PF01380 SIS domain KY998_16420 PF00392 Bacterial regulatory proteins, gntR family KY998_16420 PF07702 UTRA domain KY998_16425 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase KY998_16430 PF01979 Amidohydrolase family KY998_16435 PF07690 Major Facilitator Superfamily KY998_16440 PF14174 YycC-like protein KY998_16450 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) KY998_16455 PF00772 DnaB-like helicase N terminal domain KY998_16455 PF03796 DnaB-like helicase C terminal domain KY998_16465 PF00709 Adenylosuccinate synthetase KY998_16470 PF00293 NUDIX domain KY998_16495 PF00486 Transcriptional regulatory protein, C terminal KY998_16495 PF00072 Response regulator receiver domain KY998_16500 PF13426 PAS domain KY998_16500 PF00512 His Kinase A (phospho-acceptor) domain KY998_16500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_16500 PF00672 HAMP domain KY998_16505 PF07435 YycH protein KY998_16510 PF09648 YycH protein KY998_16515 PF00753 Metallo-beta-lactamase superfamily KY998_16520 PF13180 PDZ domain KY998_16535 PF00583 Acetyltransferase (GNAT) family KY998_16545 PF14116 YyzF-like protein KY998_16550 PF02590 Predicted SPOUT methyltransferase KY998_16570 PF00196 Bacterial regulatory proteins, luxR family KY998_16570 PF00072 Response regulator receiver domain KY998_16585 PF00005 ABC transporter KY998_16600 PF01032 FecCD transport family KY998_16605 PF01032 FecCD transport family KY998_16620 PF06874 Firmicute fructose-1,6-bisphosphatase KY998_16645 PF13192 Thioredoxin domain KY998_16645 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_16650 PF00578 AhpC/TSA family KY998_16655 PF00465 Iron-containing alcohol dehydrogenase KY998_16655 PF00171 Aldehyde dehydrogenase family KY998_16660 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase KY998_16660 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain KY998_16665 PF02447 GntP family permease KY998_16670 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY998_16670 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY998_16675 PF07729 FCD domain KY998_16675 PF00392 Bacterial regulatory proteins, gntR family KY998_16680 PF01878 EVE domain KY998_16685 PF00581 Rhodanese-like domain KY998_16700 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain KY998_16700 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain KY998_16705 PF16363 GDP-mannose 4,6 dehydratase KY998_16710 PF10509 Galactokinase galactose-binding signature KY998_16710 PF08544 GHMP kinases C terminal KY998_16710 PF00288 GHMP kinases N terminal domain KY998_16720 PF13416 Bacterial extracellular solute-binding protein KY998_16725 PF00528 Binding-protein-dependent transport system inner membrane component KY998_16730 PF00528 Binding-protein-dependent transport system inner membrane component KY998_16735 PF08533 Beta-galactosidase C-terminal domain KY998_16735 PF08532 Beta-galactosidase trimerisation domain KY998_16735 PF02449 Beta-galactosidase KY998_16740 PF07745 Glycosyl hydrolase family 53 KY998_16750 PF01235 Sodium:alanine symporter family KY998_16755 PF00672 HAMP domain KY998_16755 PF05227 CHASE3 domain KY998_16755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_16765 PF00072 Response regulator receiver domain KY998_16765 PF00486 Transcriptional regulatory protein, C terminal KY998_16770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_16775 PF00005 ABC transporter KY998_16785 PF01757 Acyltransferase family KY998_16795 PF02421 Ferrous iron transport protein B KY998_16795 PF17910 FeoB cytosolic helical domain KY998_16795 PF07670 Nucleoside recognition KY998_16795 PF07664 Ferrous iron transport protein B C terminus KY998_16815 PF01497 Periplasmic binding protein KY998_16840 PF12848 ABC transporter KY998_16840 PF00005 ABC transporter KY998_16845 PF00183 Hsp90 protein KY998_16850 PF07690 Major Facilitator Superfamily KY998_16855 PF03009 Glycerophosphoryl diester phosphodiesterase family KY998_16860 PF00248 Aldo/keto reductase family KY998_16865 PF00455 DeoR C terminal sensor domain KY998_16865 PF08220 DeoR-like helix-turn-helix domain KY998_16870 PF00171 Aldehyde dehydrogenase family KY998_16875 PF04962 KduI/IolB family KY998_16880 PF00294 pfkB family carbohydrate kinase KY998_16885 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY998_16885 PF00205 Thiamine pyrophosphate enzyme, central domain KY998_16885 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY998_16890 PF01261 Xylose isomerase-like TIM barrel KY998_16895 PF07690 Major Facilitator Superfamily KY998_16900 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_16900 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_16905 PF01261 Xylose isomerase-like TIM barrel KY998_16910 PF01261 Xylose isomerase-like TIM barrel KY998_16915 PF01116 Fructose-bisphosphate aldolase class-II KY998_16940 PF00155 Aminotransferase class I and II KY998_16945 PF03170 Bacterial cellulose synthase subunit KY998_16955 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) KY998_16960 PF00990 Diguanylate cyclase, GGDEF domain KY998_16975 PF01791 DeoC/LacD family aldolase KY998_16985 PF02885 Glycosyl transferase family, helical bundle domain KY998_16985 PF00591 Glycosyl transferase family, a/b domain KY998_16985 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain KY998_17010 PF00271 Helicase conserved C-terminal domain KY998_17010 PF03880 DbpA RNA binding domain KY998_17010 PF00270 DEAD/DEAH box helicase KY998_17015 PF04616 Glycosyl hydrolases family 43 KY998_17015 PF16369 C-terminal lipocalin-like domain KY998_17020 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family KY998_17030 PF00367 phosphotransferase system, EIIB KY998_17030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY998_17030 PF02378 Phosphotransferase system, EIIC KY998_17035 PF00232 Glycosyl hydrolase family 1 KY998_17040 PF00486 Transcriptional regulatory protein, C terminal KY998_17040 PF00072 Response regulator receiver domain KY998_17045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_17050 PF00005 ABC transporter KY998_17055 PF02687 FtsX-like permease family KY998_17060 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase KY998_17070 PF01274 Malate synthase KY998_17075 PF00463 Isocitrate lyase family KY998_17090 PF09819 ABC-type cobalt transport system, permease component KY998_17100 PF02361 Cobalt transport protein KY998_17105 PF03123 CAT RNA binding domain KY998_17105 PF00874 PRD domain KY998_17110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 KY998_17110 PF02378 Phosphotransferase system, EIIC KY998_17110 PF00367 phosphotransferase system, EIIB KY998_17115 PF00232 Glycosyl hydrolase family 1 KY998_17125 PF06628 Catalase-related immune-responsive KY998_17125 PF00199 Catalase KY998_17125 PF18011 C-terminal domain found in long catalases KY998_17130 PF07662 Na+ dependent nucleoside transporter C-terminus KY998_17130 PF01773 Na+ dependent nucleoside transporter N-terminus KY998_17155 PF01370 NAD dependent epimerase/dehydratase family KY998_17160 PF00535 Glycosyl transferase family 2 KY998_17170 PF01717 Cobalamin-independent synthase, Catalytic domain KY998_17185 PF00356 Bacterial regulatory proteins, lacI family KY998_17195 PF00528 Binding-protein-dependent transport system inner membrane component KY998_17200 PF00528 Binding-protein-dependent transport system inner membrane component KY998_17205 PF01306 LacY proton/sugar symporter KY998_17210 PF00251 Glycosyl hydrolases family 32 N-terminal domain KY998_17210 PF08244 Glycosyl hydrolases family 32 C terminal KY998_17215 PF01546 Peptidase family M20/M25/M40 KY998_17215 PF07687 Peptidase dimerisation domain KY998_17225 PF08281 Sigma-70, region 4 KY998_17225 PF04542 Sigma-70 region 2 KY998_17235 PF02378 Phosphotransferase system, EIIC KY998_17240 PF00232 Glycosyl hydrolase family 1 KY998_17250 PF00696 Amino acid kinase family KY998_17255 PF13520 Amino acid permease KY998_17260 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain KY998_17260 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain KY998_17270 PF02863 Arginine repressor, C-terminal domain KY998_17270 PF01316 Arginine repressor, DNA binding domain KY998_17275 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_17275 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_17280 PF17353 Family of unknown function (DUF5381) KY998_17295 PF05901 Excalibur calcium-binding domain KY998_17300 PF03009 Glycerophosphoryl diester phosphodiesterase family KY998_17305 PF03390 2-hydroxycarboxylate transporter family KY998_17310 PF07238 PilZ domain KY998_17310 PF03552 Cellulose synthase KY998_17310 PF00535 Glycosyl transferase family 2 KY998_17330 PF01522 Polysaccharide deacetylase KY998_17345 PF10282 Lactonase, 7-bladed beta-propeller KY998_17350 PF01381 Helix-turn-helix KY998_17355 PF00710 Asparaginase, N-terminal KY998_17355 PF17763 Glutaminase/Asparaginase C-terminal domain KY998_17360 PF00206 Lyase KY998_17360 PF10415 Fumarase C C-terminus KY998_17365 PF03553 Na+/H+ antiporter family KY998_17370 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY998_17370 PF00390 Malic enzyme, N-terminal domain KY998_17370 PF03949 Malic enzyme, NAD binding domain KY998_17380 PF01226 Formate/nitrite transporter KY998_17385 PF01654 Cytochrome bd terminal oxidase subunit I KY998_17390 PF02322 Cytochrome bd terminal oxidase subunit II KY998_17405 PF01256 Carbohydrate kinase KY998_17410 PF00544 Pectate lyase KY998_17415 PF00762 Ferrochelatase KY998_17420 PF01475 Ferric uptake regulator family KY998_17425 PF00199 Catalase KY998_17425 PF06628 Catalase-related immune-responsive KY998_17440 PF07690 Major Facilitator Superfamily KY998_17445 PF04542 Sigma-70 region 2 KY998_17445 PF08281 Sigma-70, region 4 KY998_17460 PF13396 Phospholipase_D-nuclease N-terminal KY998_17470 PF12679 ABC-2 family transporter protein KY998_17475 PF07690 Major Facilitator Superfamily KY998_17480 PF17735 Biofilm surface layer A KY998_17485 PF17735 Biofilm surface layer A KY998_17490 PF13472 GDSL-like Lipase/Acylhydrolase family KY998_17515 PF03972 MmgE/PrpD family KY998_17520 PF00285 Citrate synthase, C-terminal domain KY998_17525 PF00392 Bacterial regulatory proteins, gntR family KY998_17525 PF07729 FCD domain KY998_17530 PF02245 Methylpurine-DNA glycosylase (MPG) KY998_17535 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_17535 PF05043 Mga helix-turn-helix domain KY998_17535 PF08279 HTH domain KY998_17535 PF00874 PRD domain KY998_17540 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_17545 PF02378 Phosphotransferase system, EIIC KY998_17550 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit KY998_17555 PF11975 Family 4 glycosyl hydrolase C-terminal domain KY998_17555 PF02056 Family 4 glycosyl hydrolase KY998_17560 PF07690 Major Facilitator Superfamily KY998_17565 PF01063 Amino-transferase class IV KY998_17570 PF04914 DltD protein KY998_17575 PF00550 Phosphopantetheine attachment site KY998_17580 PF03062 MBOAT, membrane-bound O-acyltransferase family KY998_17585 PF00501 AMP-binding enzyme KY998_17585 PF13193 AMP-binding enzyme C-terminal domain KY998_17590 PF12459 D-Ala-teichoic acid biosynthesis protein KY998_17600 PF04607 Region found in RelA / SpoT proteins KY998_17625 PF01614 Bacterial transcriptional regulator KY998_17625 PF09339 IclR helix-turn-helix domain KY998_17635 PF01081 KDPG and KHG aldolase KY998_17640 PF13378 Enolase C-terminal domain-like KY998_17640 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KY998_17645 PF07690 Major Facilitator Superfamily KY998_17650 PF09529 Integral membrane protein (intg_mem_TP0381) KY998_17655 PF03176 MMPL family KY998_17660 PF00072 Response regulator receiver domain KY998_17660 PF00196 Bacterial regulatory proteins, luxR family KY998_17665 PF07730 Histidine kinase KY998_17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_17675 PF01501 Glycosyl transferase family 8 KY998_17680 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY998_17680 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KY998_17685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_17690 PF17785 PUA-like domain KY998_17690 PF10672 S-adenosylmethionine-dependent methyltransferase KY998_17695 PF00474 Sodium:solute symporter family KY998_17700 PF04172 LrgB-like family KY998_17705 PF03788 LrgA family KY998_17725 PF02110 Hydroxyethylthiazole kinase family KY998_17730 PF02581 Thiamine monophosphate synthase KY998_17735 PF00480 ROK family KY998_17740 PF01261 Xylose isomerase-like TIM barrel KY998_17745 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY998_17745 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY998_17750 PF00474 Sodium:solute symporter family KY998_17755 PF04341 Protein of unknown function, DUF485 KY998_17760 PF03358 NADPH-dependent FMN reductase KY998_17770 PF16363 GDP-mannose 4,6 dehydratase KY998_17775 PF00116 Cytochrome C oxidase subunit II, periplasmic domain KY998_17775 PF02790 Cytochrome C oxidase subunit II, transmembrane domain KY998_17780 PF00115 Cytochrome C and Quinol oxidase polypeptide I KY998_17785 PF00510 Cytochrome c oxidase subunit III KY998_17790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV KY998_17795 PF00196 Bacterial regulatory proteins, luxR family KY998_17795 PF00072 Response regulator receiver domain KY998_17815 PF00005 ABC transporter KY998_17825 PF00583 Acetyltransferase (GNAT) family KY998_17835 PF17368 Spore morphogenesis and germination YwcE KY998_17845 PF07670 Nucleoside recognition KY998_17850 PF01098 Cell cycle protein KY998_17855 PF01098 Cell cycle protein KY998_17860 PF01546 Peptidase family M20/M25/M40 KY998_17860 PF07687 Peptidase dimerisation domain KY998_17865 PF00881 Nitroreductase family KY998_17875 PF00296 Luciferase-like monooxygenase KY998_17885 PF02225 PA domain KY998_17885 PF05922 Peptidase inhibitor I9 KY998_17885 PF13860 FlgD Ig-like domain KY998_17885 PF00082 Subtilase family KY998_17895 PF03123 CAT RNA binding domain KY998_17895 PF00874 PRD domain KY998_17900 PF02378 Phosphotransferase system, EIIC KY998_17900 PF00367 phosphotransferase system, EIIB KY998_17915 PF08543 Phosphomethylpyrimidine kinase KY998_17920 PF00535 Glycosyl transferase family 2 KY998_17925 PF03167 Uracil DNA glycosylase superfamily KY998_17935 PF17261 Family of unknown function (DUF5327) KY998_17940 PF00860 Permease family KY998_17945 PF04241 Protein of unknown function (DUF423) KY998_17950 PF00196 Bacterial regulatory proteins, luxR family KY998_17950 PF00072 Response regulator receiver domain KY998_17960 PF00005 ABC transporter KY998_17975 PF09671 Spore coat protein (Spore_GerQ) KY998_17980 PF02386 Cation transport protein KY998_17985 PF17735 Biofilm surface layer A KY998_17990 PF06778 Chlorite dismutase KY998_17995 PF01515 Phosphate acetyl/butaryl transferase KY998_18005 PF01614 Bacterial transcriptional regulator KY998_18005 PF09339 IclR helix-turn-helix domain KY998_18010 PF00171 Aldehyde dehydrogenase family KY998_18020 PF01361 Tautomerase enzyme KY998_18030 PF07690 Major Facilitator Superfamily KY998_18035 PF01494 FAD binding domain KY998_18040 PF03099 Biotin/lipoate A/B protein ligase family KY998_18045 PF14154 Domain of unknown function (DUF4306) KY998_18055 PF07293 Protein of unknown function (DUF1450) KY998_18060 PF01966 HD domain KY998_18075 PF01361 Tautomerase enzyme KY998_18080 PF02163 Peptidase family M50 KY998_18085 PF08741 YwhD family KY998_18095 PF17284 Spermidine synthase tetramerisation domain KY998_18100 PF00491 Arginase family KY998_18105 PF09148 Domain of unknown function (DUF1934) KY998_18110 PF00750 tRNA synthetases class I (R) KY998_18110 PF03485 Arginyl tRNA synthetase N terminal domain KY998_18110 PF05746 DALR anticodon binding domain KY998_18125 PF02754 Cysteine-rich domain KY998_18125 PF13183 4Fe-4S dicluster domain KY998_18130 PF02803 Thiolase, C-terminal domain KY998_18130 PF00108 Thiolase, N-terminal domain KY998_18155 PF05066 HB1, ASXL, restriction endonuclease HTH domain KY998_18160 PF06418 CTP synthase N-terminus KY998_18160 PF00117 Glutamine amidotransferase class-I KY998_18165 PF10740 Domain of unknown function (DUF2529) KY998_18170 PF00072 Response regulator receiver domain KY998_18175 PF01116 Fructose-bisphosphate aldolase class-II KY998_18180 PF00923 Transaldolase/Fructose-6-phosphate aldolase KY998_18185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY998_18190 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded KY998_18195 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY998_18195 PF07497 Rho termination factor, RNA-binding domain KY998_18195 PF07498 Rho termination factor, N-terminal domain KY998_18200 PF01197 Ribosomal protein L31 KY998_18205 PF00265 Thymidine kinase KY998_18210 PF00390 Malic enzyme, N-terminal domain KY998_18210 PF03949 Malic enzyme, NAD binding domain KY998_18215 PF03547 Membrane transport protein KY998_18220 PF13411 MerR HTH family regulatory protein KY998_18225 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_18230 PF03462 PCRF domain KY998_18230 PF00472 RF-1 domain KY998_18235 PF05175 Methyltransferase small domain KY998_18235 PF17827 PrmC N-terminal domain KY998_18240 PF00356 Bacterial regulatory proteins, lacI family KY998_18245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KY998_18250 PF05116 Sucrose-6F-phosphate phosphohydrolase KY998_18255 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_18255 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_18260 PF07690 Major Facilitator Superfamily KY998_18275 PF03481 Putative GTP-binding controlling metal-binding KY998_18275 PF01300 Telomere recombination KY998_18280 PF02659 Putative manganese efflux pump KY998_18285 PF01451 Low molecular weight phosphotyrosine protein phosphatase KY998_18290 PF02502 Ribose/Galactose Isomerase KY998_18295 PF04260 Protein of unknown function (DUF436) KY998_18300 PF00464 Serine hydroxymethyltransferase KY998_18310 PF03899 ATP synthase I chain KY998_18315 PF00119 ATP synthase A chain KY998_18320 PF00137 ATP synthase subunit C KY998_18325 PF00430 ATP synthase B/B' CF(0) KY998_18330 PF00213 ATP synthase delta (OSCP) subunit KY998_18335 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY998_18335 PF00306 ATP synthase alpha/beta chain, C terminal domain KY998_18335 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY998_18340 PF00231 ATP synthase KY998_18345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain KY998_18345 PF02874 ATP synthase alpha/beta family, beta-barrel domain KY998_18350 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain KY998_18350 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain KY998_18355 PF06612 Protein of unknown function (DUF1146) KY998_18360 PF08680 TATA-box binding KY998_18365 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) KY998_18370 PF08486 Stage II sporulation protein KY998_18375 PF00092 von Willebrand factor type A domain KY998_18380 PF00092 von Willebrand factor type A domain KY998_18390 PF07690 Major Facilitator Superfamily KY998_18400 PF06463 Molybdenum Cofactor Synthesis C KY998_18400 PF04055 Radical SAM superfamily KY998_18415 PF02082 Transcriptional regulator KY998_18425 PF13302 Acetyltransferase (GNAT) domain KY998_18430 PF17319 Family of unknown function (DUF5362) KY998_18440 PF01497 Periplasmic binding protein KY998_18445 PF01032 FecCD transport family KY998_18450 PF01032 FecCD transport family KY998_18455 PF00756 Putative esterase KY998_18460 PF00106 short chain dehydrogenase KY998_18465 PF00425 chorismate binding enzyme KY998_18470 PF00501 AMP-binding enzyme KY998_18470 PF13193 AMP-binding enzyme C-terminal domain KY998_18475 PF00857 Isochorismatase family KY998_18475 PF00550 Phosphopantetheine attachment site KY998_18485 PF03621 MbtH-like protein KY998_18490 PF07690 Major Facilitator Superfamily KY998_18495 PF13091 PLD-like domain KY998_18495 PF13396 Phospholipase_D-nuclease N-terminal KY998_18500 PF17370 Family of unknown function (DUF5392) KY998_18505 PF00583 Acetyltransferase (GNAT) family KY998_18510 PF01551 Peptidase family M23 KY998_18515 PF04542 Sigma-70 region 2 KY998_18515 PF08281 Sigma-70, region 4 KY998_18515 PF12680 SnoaL-like domain KY998_18520 PF00574 Clp protease KY998_18525 PF00543 Nitrogen regulatory protein P-II KY998_18530 PF00909 Ammonium Transporter Family KY998_18540 PF01544 CorA-like Mg2+ transporter protein KY998_18545 PF00571 CBS domain KY998_18560 PF09844 Uncharacterized conserved protein (COG2071) KY998_18565 PF05067 Manganese containing catalase KY998_18570 PF01368 DHH family KY998_18570 PF02833 DHHA2 domain KY998_18575 PF01569 PAP2 superfamily KY998_18580 PF07690 Major Facilitator Superfamily KY998_18585 PF01047 MarR family KY998_18590 PF12116 Stage III sporulation protein D KY998_18600 PF00460 Flagella basal body rod protein KY998_18600 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY998_18605 PF00460 Flagella basal body rod protein KY998_18605 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY998_18610 PF07977 FabA-like domain KY998_18615 PF01741 Large-conductance mechanosensitive channel, MscL KY998_18620 PF14183 YwpF-like protein KY998_18630 PF00436 Single-strand binding protein family KY998_18635 PF04198 Putative sugar-binding domain KY998_18635 PF13936 Helix-turn-helix domain KY998_18645 PF03608 PTS system enzyme II sorbitol-specific factor KY998_18655 PF03829 PTS system glucitol/sorbitol-specific IIA component KY998_18660 PF00106 short chain dehydrogenase KY998_18665 PF00923 Transaldolase/Fructose-6-phosphate aldolase KY998_18670 PF08220 DeoR-like helix-turn-helix domain KY998_18670 PF00455 DeoR C terminal sensor domain KY998_18695 PF06480 FtsH Extracellular KY998_18695 PF01434 Peptidase family M41 KY998_18695 PF00004 ATPase family associated with various cellular activities (AAA) KY998_18695 PF17862 AAA+ lid domain KY998_18700 PF09234 Domain of unknown function (DUF1963) KY998_18705 PF12419 SNF2 Helicase protein KY998_18705 PF00271 Helicase conserved C-terminal domain KY998_18705 PF00176 SNF2 family N-terminal domain KY998_18710 PF04434 SWIM zinc finger KY998_18720 PF13807 G-rich domain on putative tyrosine kinase KY998_18720 PF02706 Chain length determinant protein KY998_18730 PF02417 Chromate transporter KY998_18735 PF02417 Chromate transporter KY998_18740 PF01037 Lrp/AsnC ligand binding domain KY998_18740 PF13404 AsnC-type helix-turn-helix domain KY998_18760 PF03306 Alpha-acetolactate decarboxylase KY998_18765 PF08241 Methyltransferase domain KY998_18770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_18770 PF03466 LysR substrate binding domain KY998_18775 PF13407 Periplasmic binding protein domain KY998_18780 PF02653 Branched-chain amino acid transport system / permease component KY998_18790 PF05025 RbsD / FucU transport protein family KY998_18795 PF00294 pfkB family carbohydrate kinase KY998_18800 PF00356 Bacterial regulatory proteins, lacI family KY998_18805 PF08245 Mur ligase middle domain KY998_18810 PF14102 Capsule biosynthesis CapC KY998_18815 PF09587 Bacterial capsule synthesis protein PGA_cap KY998_18825 PF00877 NlpC/P60 family KY998_18835 PF03816 Cell envelope-related transcriptional attenuator domain KY998_18840 PF00083 Sugar (and other) transporter KY998_18850 PF00107 Zinc-binding dehydrogenase KY998_18850 PF08240 Alcohol dehydrogenase GroES-like domain KY998_18850 PF13823 Alcohol dehydrogenase GroES-associated KY998_18860 PF04962 KduI/IolB family KY998_18865 PF00356 Bacterial regulatory proteins, lacI family KY998_18870 PF00294 pfkB family carbohydrate kinase KY998_18880 PF03812 2-keto-3-deoxygluconate permease KY998_18885 PF03477 ATP cone domain KY998_18885 PF13597 Anaerobic ribonucleoside-triphosphate reductase KY998_18900 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KY998_18900 PF08239 Bacterial SH3 domain KY998_18900 PF05036 Sporulation related domain KY998_18915 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY998_18915 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY998_18915 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY998_18920 PF02350 UDP-N-acetylglucosamine 2-epimerase KY998_18930 PF00535 Glycosyl transferase family 2 KY998_18940 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase KY998_18940 PF05036 Sporulation related domain KY998_18940 PF08239 Bacterial SH3 domain KY998_18950 PF01061 ABC-2 type transporter KY998_18955 PF00535 Glycosyl transferase family 2 KY998_18955 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KY998_18960 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KY998_18965 PF09318 Glycosyl transferase 1 domain A KY998_18965 PF00534 Glycosyl transferases group 1 KY998_18970 PF01467 Cytidylyltransferase-like KY998_18975 PF03808 Glycosyl transferase WecB/TagA/CpsF family KY998_18980 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase KY998_18990 PF02350 UDP-N-acetylglucosamine 2-epimerase KY998_18995 PF03816 Cell envelope-related transcriptional attenuator domain KY998_19005 PF01520 N-acetylmuramoyl-L-alanine amidase KY998_19005 PF04122 Putative cell wall binding repeat 2 KY998_19010 PF02397 Bacterial sugar transferase KY998_19015 PF14667 Polysaccharide biosynthesis C-terminal domain KY998_19015 PF01943 Polysaccharide biosynthesis protein KY998_19020 PF13439 Glycosyltransferase Family 4 KY998_19020 PF00534 Glycosyl transferases group 1 KY998_19025 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain KY998_19025 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain KY998_19025 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain KY998_19030 PF16363 GDP-mannose 4,6 dehydratase KY998_19035 PF04932 O-Antigen ligase KY998_19040 PF02706 Chain length determinant protein KY998_19045 PF00535 Glycosyl transferase family 2 KY998_19055 PF00953 Glycosyl transferase family 4 KY998_19065 PF03816 Cell envelope-related transcriptional attenuator domain KY998_19070 PF01205 Uncharacterized protein family UPF0029 KY998_19070 PF09186 Domain of unknown function (DUF1949) KY998_19075 PF05384 Sensor protein DegS KY998_19075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_19075 PF07730 Histidine kinase KY998_19080 PF00196 Bacterial regulatory proteins, luxR family KY998_19080 PF00072 Response regulator receiver domain KY998_19085 PF02645 Uncharacterised protein, DegV family COG1307 KY998_19090 PF00271 Helicase conserved C-terminal domain KY998_19090 PF04851 Type III restriction enzyme, res subunit KY998_19095 PF10719 Late competence development protein ComFB KY998_19110 PF04316 Anti-sigma-28 factor, FlgM KY998_19115 PF05130 FlgN protein KY998_19120 PF00460 Flagella basal body rod protein KY998_19120 PF06429 Flagellar basal body rod FlgEFG protein C-terminal KY998_19125 PF00700 Bacterial flagellin C-terminal helical region KY998_19125 PF00669 Bacterial flagellin N-terminal helical region KY998_19135 PF02623 FliW protein KY998_19140 PF02599 Global regulator protein family KY998_19145 PF00700 Bacterial flagellin C-terminal helical region KY998_19145 PF00669 Bacterial flagellin N-terminal helical region KY998_19155 PF03646 FlaG protein KY998_19160 PF07196 Flagellin hook IN motif KY998_19160 PF07195 Flagellar hook-associated protein 2 C-terminus KY998_19160 PF02465 Flagellar hook-associated protein 2 N-terminus KY998_19165 PF02561 Flagellar protein FliS KY998_19180 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus KY998_19180 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein KY998_19185 PF02810 SEC-C motif KY998_19185 PF07517 SecA DEAD-like domain KY998_19185 PF01043 SecA preprotein cross-linking domain KY998_19185 PF07516 SecA Wing and Scaffold domain KY998_19190 PF00472 RF-1 domain KY998_19190 PF03462 PCRF domain KY998_19195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) KY998_19195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 KY998_19200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III KY998_19210 PF18075 FtsX extracellular domain KY998_19210 PF02687 FtsX-like permease family KY998_19215 PF00877 NlpC/P60 family KY998_19220 PF00180 Isocitrate/isopropylmalate dehydrogenase KY998_19225 PF17820 PDZ domain KY998_19225 PF01471 Putative peptidoglycan binding domain KY998_19225 PF03572 Peptidase family S41 KY998_19230 PF17423 Swarming motility protein KY998_19235 PF17820 PDZ domain KY998_19245 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) KY998_19250 PF00271 Helicase conserved C-terminal domain KY998_19250 PF04851 Type III restriction enzyme, res subunit KY998_19250 PF02151 UvrB/uvrC motif KY998_19250 PF12344 Ultra-violet resistance protein B KY998_19250 PF17757 UvrB interaction domain KY998_19255 PF00005 ABC transporter KY998_19255 PF17760 UvrA interaction domain KY998_19255 PF17755 UvrA DNA-binding domain KY998_19260 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_19275 PF13349 Putative adhesin KY998_19280 PF04024 PspC domain KY998_19285 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV KY998_19290 PF00149 Calcineurin-like phosphoesterase KY998_19295 PF07690 Major Facilitator Superfamily KY998_19300 PF01047 MarR family KY998_19305 PF02603 HPr Serine kinase N terminus KY998_19305 PF07475 HPr Serine kinase C-terminal domain KY998_19310 PF01790 Prolipoprotein diacylglyceryl transferase KY998_19315 PF07670 Nucleoside recognition KY998_19320 PF13419 Haloacid dehalogenase-like hydrolase KY998_19325 PF14602 Hexapeptide repeat of succinyl-transferase KY998_19330 PF03211 Pectate lyase KY998_19335 PF13529 Peptidase_C39 like family KY998_19340 PF13393 Histidyl-tRNA synthetase KY998_19345 PF01634 ATP phosphoribosyltransferase KY998_19350 PF00815 Histidinol dehydrogenase KY998_19355 PF00475 Imidazoleglycerol-phosphate dehydratase KY998_19360 PF00117 Glutamine amidotransferase class-I KY998_19365 PF00977 Histidine biosynthesis protein KY998_19370 PF00977 Histidine biosynthesis protein KY998_19375 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase KY998_19375 PF01502 Phosphoribosyl-AMP cyclohydrolase KY998_19390 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_19395 PF00293 NUDIX domain KY998_19400 PF03668 P-loop ATPase protein family KY998_19405 PF01933 Uncharacterised protein family UPF0052 KY998_19410 PF02650 WhiA C-terminal HTH domain KY998_19410 PF14527 WhiA LAGLIDADG-like domain KY998_19410 PF10298 WhiA N-terminal LAGLIDADG-like domain KY998_19415 PF00381 PTS HPr component phosphorylation site KY998_19420 PF00797 N-acetyltransferase KY998_19425 PF01337 Barstar (barnase inhibitor) KY998_19430 PF00545 ribonuclease KY998_19440 PF01613 Flavin reductase like domain KY998_19450 PF00484 Carbonic anhydrase KY998_19455 PF01740 STAS domain KY998_19455 PF00916 Sulfate permease family KY998_19465 PF03819 MazG nucleotide pyrophosphohydrolase domain KY998_19470 PF03641 Possible lysine decarboxylase KY998_19475 PF00574 Clp protease KY998_19495 PF08244 Glycosyl hydrolases family 32 C terminal KY998_19495 PF00251 Glycosyl hydrolases family 32 N-terminal domain KY998_19500 PF02435 Levansucrase/Invertase KY998_19505 PF00724 NADH:flavin oxidoreductase / NADH oxidase family KY998_19510 PF01638 HxlR-like helix-turn-helix KY998_19515 PF02954 Bacterial regulatory protein, Fis family KY998_19515 PF06506 Propionate catabolism activator KY998_19515 PF00158 Sigma-54 interaction domain KY998_19520 PF00701 Dihydrodipicolinate synthetase family KY998_19525 PF00465 Iron-containing alcohol dehydrogenase KY998_19530 PF17042 Nucleotide-binding C-terminal domain KY998_19530 PF07005 Sugar-binding N-terminal domain KY998_19535 PF04166 Pyridoxal phosphate biosynthetic protein PdxA KY998_19540 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KY998_19540 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY998_19540 PF01842 ACT domain KY998_19545 PF07690 Major Facilitator Superfamily KY998_19550 PF02525 Flavodoxin-like fold KY998_19560 PF08671 Anti-repressor SinI KY998_19560 PF01381 Helix-turn-helix KY998_19565 PF02706 Chain length determinant protein KY998_19570 PF13614 AAA domain KY998_19575 PF02719 Polysaccharide biosynthesis protein KY998_19580 PF13439 Glycosyltransferase Family 4 KY998_19580 PF00534 Glycosyl transferases group 1 KY998_19590 PF13439 Glycosyltransferase Family 4 KY998_19590 PF00534 Glycosyl transferases group 1 KY998_19600 PF00535 Glycosyl transferase family 2 KY998_19605 PF04230 Polysaccharide pyruvyl transferase KY998_19610 PF00535 Glycosyl transferase family 2 KY998_19615 PF01943 Polysaccharide biosynthesis protein KY998_19615 PF14667 Polysaccharide biosynthesis C-terminal domain KY998_19620 PF02397 Bacterial sugar transferase KY998_19625 PF17836 PglD N-terminal domain KY998_19625 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_19630 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family KY998_19635 PF04230 Polysaccharide pyruvyl transferase KY998_19640 PF09628 YvfG protein KY998_19645 PF00309 Sigma-54 factor, Activator interacting domain (AID) KY998_19645 PF04963 Sigma-54 factor, core binding domain KY998_19645 PF04552 Sigma-54, DNA binding domain KY998_19650 PF02652 L-lactate permease KY998_19655 PF07729 FCD domain KY998_19655 PF00392 Bacterial regulatory proteins, gntR family KY998_19660 PF02754 Cysteine-rich domain KY998_19665 PF11870 Domain of unknown function (DUF3390) KY998_19665 PF13183 4Fe-4S dicluster domain KY998_19665 PF02589 LUD domain KY998_19670 PF02589 LUD domain KY998_19680 PF00005 ABC transporter KY998_19690 PF00324 Amino acid permease KY998_19695 PF00296 Luciferase-like monooxygenase KY998_19700 PF04198 Putative sugar-binding domain KY998_19705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KY998_19705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KY998_19710 PF00162 Phosphoglycerate kinase KY998_19715 PF00121 Triosephosphate isomerase KY998_19720 PF01676 Metalloenzyme superfamily KY998_19720 PF06415 BPG-independent PGAM N-terminus (iPGM_N) KY998_19725 PF03952 Enolase, N-terminal domain KY998_19725 PF00113 Enolase, C-terminal TIM barrel domain KY998_19730 PF01965 DJ-1/PfpI family KY998_19745 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_19745 PF00672 HAMP domain KY998_19745 PF02743 Cache domain KY998_19755 PF13240 zinc-ribbon domain KY998_19765 PF01914 MarC family integral membrane protein KY998_19770 PF12802 MarR family KY998_19775 PF00005 ABC transporter KY998_19775 PF00571 CBS domain KY998_19780 PF00528 Binding-protein-dependent transport system inner membrane component KY998_19785 PF04069 Substrate binding domain of ABC-type glycine betaine transport system KY998_19790 PF00528 Binding-protein-dependent transport system inner membrane component KY998_19805 PF01381 Helix-turn-helix KY998_19810 PF18277 AbrB C-terminal domain KY998_19810 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin KY998_19815 PF03840 Preprotein translocase SecG subunit KY998_19820 PF12146 Serine aminopeptidase, S33 KY998_19825 PF00773 RNB domain KY998_19825 PF17876 Cold shock domain KY998_19825 PF08206 Ribonuclease B OB domain KY998_19825 PF00575 S1 RNA binding domain KY998_19830 PF01668 SmpB protein KY998_19850 PF14449 Pre-toxin TG KY998_19850 PF14431 YwqJ-like deaminase KY998_19850 PF04740 LXG domain of WXG superfamily KY998_19860 PF14317 YcxB-like protein KY998_19870 PF03422 Carbohydrate binding module (family 6) KY998_19870 PF04616 Glycosyl hydrolases family 43 KY998_19875 PF17189 Glycosyl hydrolase family 30 beta sandwich domain KY998_19890 PF14184 Regulatory protein YrvL KY998_19900 PF12841 YvrJ protein family KY998_19905 PF04545 Sigma-70, region 4 KY998_19915 PF00581 Rhodanese-like domain KY998_19915 PF12368 Rhodanase C-terminal KY998_19915 PF17773 UPF0176 acylphosphatase like domain KY998_19935 PF02525 Flavodoxin-like fold KY998_19940 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_19940 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_19945 PF01425 Amidase KY998_19960 PF00067 Cytochrome P450 KY998_19965 PF16715 Cyclodipeptide synthase KY998_19970 PF07690 Major Facilitator Superfamily KY998_19975 PF07690 Major Facilitator Superfamily KY998_19980 PF00596 Class II Aldolase and Adducin N-terminal domain KY998_19990 PF01261 Xylose isomerase-like TIM barrel KY998_19995 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY998_19995 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY998_20005 PF01965 DJ-1/PfpI family KY998_20010 PF02583 Metal-sensitive transcriptional repressor KY998_20015 PF00403 Heavy-metal-associated domain KY998_20020 PF00403 Heavy-metal-associated domain KY998_20035 PF01116 Fructose-bisphosphate aldolase class-II KY998_20040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_20045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit KY998_20045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 KY998_20055 PF01418 Helix-turn-helix domain, rpiR family KY998_20055 PF01380 SIS domain KY998_20070 PF01297 Zinc-uptake complex component A periplasmic KY998_20075 PF00950 ABC 3 transport family KY998_20080 PF00005 ABC transporter KY998_20085 PF14310 Fibronectin type III-like domain KY998_20085 PF00933 Glycosyl hydrolase family 3 N terminal domain KY998_20085 PF01915 Glycosyl hydrolase family 3 C-terminal domain KY998_20085 PF07691 PA14 domain KY998_20090 PF13802 Galactose mutarotase-like KY998_20090 PF01055 Glycosyl hydrolases family 31 KY998_20095 PF00528 Binding-protein-dependent transport system inner membrane component KY998_20100 PF00528 Binding-protein-dependent transport system inner membrane component KY998_20105 PF13416 Bacterial extracellular solute-binding protein KY998_20110 PF00403 Heavy-metal-associated domain KY998_20115 PF13462 Thioredoxin KY998_20120 PF02600 Disulfide bond formation protein DsbB KY998_20125 PF00583 Acetyltransferase (GNAT) family KY998_20125 PF13673 Acetyltransferase (GNAT) domain KY998_20130 PF13673 Acetyltransferase (GNAT) domain KY998_20130 PF04229 GrpB protein KY998_20135 PF03458 UPF0126 domain KY998_20140 PF13538 UvrD-like helicase C-terminal domain KY998_20145 PF12697 Alpha/beta hydrolase family KY998_20155 PF00266 Aminotransferase class-V KY998_20160 PF00480 ROK family KY998_20165 PF00248 Aldo/keto reductase family KY998_20170 PF07690 Major Facilitator Superfamily KY998_20175 PF00884 Sulfatase KY998_20180 PF04307 LexA-binding, inner membrane-associated putative hydrolase KY998_20185 PF09575 Small spore protein J (Spore_SspJ) KY998_20190 PF13520 Amino acid permease KY998_20200 PF01032 FecCD transport family KY998_20205 PF00005 ABC transporter KY998_20210 PF00072 Response regulator receiver domain KY998_20210 PF00486 Transcriptional regulatory protein, C terminal KY998_20215 PF00512 His Kinase A (phospho-acceptor) domain KY998_20215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_20220 PF02614 Glucuronate isomerase KY998_20230 PF00356 Bacterial regulatory proteins, lacI family KY998_20235 PF01232 Mannitol dehydrogenase Rossmann domain KY998_20235 PF08125 Mannitol dehydrogenase C-terminal domain KY998_20240 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus KY998_20240 PF08666 SAF domain KY998_20245 PF00295 Glycosyl hydrolases family 28 KY998_20250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_20250 PF03466 LysR substrate binding domain KY998_20255 PF03475 3-alpha domain KY998_20255 PF03473 MOSC domain KY998_20260 PF00106 short chain dehydrogenase KY998_20265 PF00392 Bacterial regulatory proteins, gntR family KY998_20265 PF07729 FCD domain KY998_20270 PF01497 Periplasmic binding protein KY998_20280 PF00005 ABC transporter KY998_20285 PF00701 Dihydrodipicolinate synthetase family KY998_20290 PF00465 Iron-containing alcohol dehydrogenase KY998_20315 PF01923 Cobalamin adenosyltransferase KY998_20320 PF01095 Pectinesterase KY998_20330 PF04012 PspA/IM30 family KY998_20335 PF13349 Putative adhesin KY998_20345 PF00672 HAMP domain KY998_20345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_20345 PF07730 Histidine kinase KY998_20350 PF00196 Bacterial regulatory proteins, luxR family KY998_20350 PF00072 Response regulator receiver domain KY998_20360 PF05504 Spore germination B3/ GerAC like, C-terminal KY998_20365 PF03845 Spore germination protein KY998_20370 PF03323 Bacillus/Clostridium GerA spore germination protein KY998_20375 PF13113 Protein of unknown function (DUF3970) KY998_20380 PF10415 Fumarase C C-terminus KY998_20380 PF00206 Lyase KY998_20385 PF00440 Bacterial regulatory proteins, tetR family KY998_20395 PF00672 HAMP domain KY998_20395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_20395 PF00512 His Kinase A (phospho-acceptor) domain KY998_20405 PF13180 PDZ domain KY998_20410 PF00210 Ferritin-like domain KY998_20415 PF00106 short chain dehydrogenase KY998_20420 PF07943 Penicillin-binding protein 5, C-terminal domain KY998_20420 PF00768 D-alanyl-D-alanine carboxypeptidase KY998_20430 PF14039 YusW-like protein KY998_20435 PF01497 Periplasmic binding protein KY998_20445 PF01032 FecCD transport family KY998_20450 PF00005 ABC transporter KY998_20460 PF10835 Protein of unknown function (DUF2573) KY998_20465 PF07875 Coat F domain KY998_20475 PF14115 YuzL-like protein KY998_20480 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain KY998_20480 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain KY998_20480 PF00378 Enoyl-CoA hydratase/isomerase KY998_20485 PF02803 Thiolase, C-terminal domain KY998_20485 PF00108 Thiolase, N-terminal domain KY998_20490 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_20490 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_20490 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY998_20495 PF03960 ArsC family KY998_20500 PF01597 Glycine cleavage H-protein KY998_20505 PF10830 Protein of unknown function (DUF2553) KY998_20510 PF01751 Toprim domain KY998_20515 PF00085 Thioredoxin KY998_20520 PF02036 SCP-2 sterol transfer family KY998_20525 PF00005 ABC transporter KY998_20525 PF09383 NIL domain KY998_20530 PF00528 Binding-protein-dependent transport system inner membrane component KY998_20535 PF03180 NLPA lipoprotein KY998_20540 PF02627 Carboxymuconolactone decarboxylase family KY998_20545 PF01545 Cation efflux family KY998_20545 PF16916 Dimerisation domain of Zinc Transporter KY998_20550 PF00005 ABC transporter KY998_20560 PF00266 Aminotransferase class-V KY998_20565 PF01592 NifU-like N terminal domain KY998_20570 PF01458 Uncharacterized protein family (UPF0051) KY998_20580 PF18801 response regulator aspartate phosphatase H, N terminal KY998_20595 PF01266 FAD dependent oxidoreductase KY998_20605 PF04231 Endonuclease I KY998_20615 PF02885 Glycosyl transferase family, helical bundle domain KY998_20615 PF00591 Glycosyl transferase family, a/b domain KY998_20620 PF03606 C4-dicarboxylate anaerobic carrier KY998_20625 PF07690 Major Facilitator Superfamily KY998_20630 PF13556 PucR C-terminal helix-turn-helix domain KY998_20630 PF17853 GGDEF-like domain KY998_20630 PF07905 Purine catabolism regulatory protein-like family KY998_20635 PF00266 Aminotransferase class-V KY998_20640 PF00440 Bacterial regulatory proteins, tetR family KY998_20640 PF13977 BetI-type transcriptional repressor, C-terminal KY998_20655 PF01925 Sulfite exporter TauE/SafE KY998_20665 PF08827 Domain of unknown function (DUF1805) KY998_20670 PF09560 Sporulation protein YunB (Spo_YunB) KY998_20675 PF00209 Sodium:neurotransmitter symporter family KY998_20695 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family KY998_20695 PF04055 Radical SAM superfamily KY998_20700 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) KY998_20705 PF06265 Protein of unknown function (DUF1027) KY998_20710 PF01934 Protein of unknown function DUF86 KY998_20715 PF13344 Haloacid dehalogenase-like hydrolase KY998_20720 PF04608 Phosphatidylglycerophosphatase A KY998_20730 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain KY998_20730 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain KY998_20735 PF01842 ACT domain KY998_20735 PF00742 Homoserine dehydrogenase KY998_20735 PF03447 Homoserine dehydrogenase, NAD binding domain KY998_20740 PF00291 Pyridoxal-phosphate dependent enzyme KY998_20745 PF08544 GHMP kinases C terminal KY998_20745 PF00288 GHMP kinases N terminal domain KY998_20750 PF00326 Prolyl oligopeptidase family KY998_20750 PF07676 WD40-like Beta Propeller Repeat KY998_20760 PF07315 Protein of unknown function (DUF1462) KY998_20770 PF05870 Phenolic acid decarboxylase (PAD) KY998_20775 PF18801 response regulator aspartate phosphatase H, N terminal KY998_20790 PF08818 Domain of unknown function (DU1801) KY998_20795 PF02915 Rubrerythrin KY998_20800 PF04239 Protein of unknown function (DUF421) KY998_20805 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_20810 PF07293 Protein of unknown function (DUF1450) KY998_20815 PF07662 Na+ dependent nucleoside transporter C-terminus KY998_20815 PF01773 Na+ dependent nucleoside transporter N-terminus KY998_20820 PF01678 Diaminopimelate epimerase KY998_20825 PF01521 Iron-sulphur cluster biosynthesis KY998_20830 PF00583 Acetyltransferase (GNAT) family KY998_20835 PF14169 Cold-inducible protein YdjO KY998_20845 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_20850 PF07992 Pyridine nucleotide-disulphide oxidoreductase KY998_20855 PF17302 Family of unknown function (DUF5351) KY998_20860 PF14068 Putative membrane protein KY998_20865 PF06725 3D domain KY998_20870 PF02681 Divergent PAP2 family KY998_20875 PF00883 Cytosol aminopeptidase family, catalytic domain KY998_20875 PF02789 Cytosol aminopeptidase family, N-terminal domain KY998_20880 PF13726 Na+-H+ antiporter family KY998_20880 PF03553 Na+/H+ antiporter family KY998_20885 PF02632 BioY family KY998_20890 PF00174 Oxidoreductase molybdopterin binding domain KY998_20900 PF01262 Alanine dehydrogenase/PNT, C-terminal domain KY998_20900 PF05222 Alanine dehydrogenase/PNT, N-terminal domain KY998_20905 PF06018 CodY GAF-like domain KY998_20905 PF17853 GGDEF-like domain KY998_20905 PF13556 PucR C-terminal helix-turn-helix domain KY998_20910 PF01235 Sodium:alanine symporter family KY998_20915 PF06013 Proteins of 100 residues with WXG KY998_20920 PF08817 WXG100 protein secretion system (Wss), protein YukD KY998_20925 PF10140 WXG100 protein secretion system (Wss), protein YukC KY998_20930 PF12538 DNA transporter KY998_20930 PF01580 FtsK/SpoIIIE family KY998_20940 PF17355 Family of unknown function (DUF5383) KY998_20955 PF01966 HD domain KY998_20965 PF00331 Glycosyl hydrolase family 10 KY998_20965 PF07859 alpha/beta hydrolase fold KY998_20970 PF02082 Transcriptional regulator KY998_20975 PF01594 AI-2E family transporter KY998_20985 PF14166 YueH-like protein KY998_20990 PF07997 Protein of unknown function (DUF1694) KY998_20995 PF00857 Isochorismatase family KY998_21000 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain KY998_21000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family KY998_21000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain KY998_21005 PF08668 HDOD domain KY998_21005 PF00563 EAL domain KY998_21010 PF08181 DegQ (SacQ) family KY998_21025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_21025 PF07730 Histidine kinase KY998_21030 PF00196 Bacterial regulatory proteins, luxR family KY998_21030 PF00072 Response regulator receiver domain KY998_21035 PF03061 Thioesterase superfamily KY998_21040 PF03334 Na+/H+ antiporter subunit KY998_21045 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) KY998_21050 PF01899 Na+/H+ ion antiporter subunit KY998_21055 PF00361 Proton-conducting membrane transporter KY998_21060 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L KY998_21065 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter KY998_21070 PF13244 Domain of unknown function (DUF4040) KY998_21070 PF00361 Proton-conducting membrane transporter KY998_21070 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus KY998_21080 PF03390 2-hydroxycarboxylate transporter family KY998_21085 PF02666 Phosphatidylserine decarboxylase KY998_21090 PF09335 SNARE associated Golgi protein KY998_21095 PF01066 CDP-alcohol phosphatidyltransferase KY998_21100 PF02653 Branched-chain amino acid transport system / permease component KY998_21115 PF17328 Family of unknown function (DUF5366) KY998_21120 PF04134 Protein of unknown function, DUF393 KY998_21130 PF07690 Major Facilitator Superfamily KY998_21135 PF00929 Exonuclease KY998_21140 PF08810 Kinase associated protein B KY998_21150 PF00155 Aminotransferase class I and II KY998_21160 PF08958 Domain of unknown function (DUF1871) KY998_21165 PF08386 TAP-like protein KY998_21165 PF00561 alpha/beta hydrolase fold KY998_21170 PF01037 Lrp/AsnC ligand binding domain KY998_21185 PF04070 Domain of unknown function (DUF378) KY998_21190 PF00465 Iron-containing alcohol dehydrogenase KY998_21195 PF00342 Phosphoglucose isomerase KY998_21200 PF13302 Acetyltransferase (GNAT) domain KY998_21205 PF03073 TspO/MBR family KY998_21210 PF04239 Protein of unknown function (DUF421) KY998_21215 PF08868 YugN-like family KY998_21220 PF07885 Ion channel KY998_21220 PF02254 TrkA-N domain KY998_21225 PF11458 Membrane-integrating protein Mistic KY998_21235 PF04298 Putative neutral zinc metallopeptidase KY998_21240 PF00571 CBS domain KY998_21240 PF03471 Transporter associated domain KY998_21240 PF01595 Cyclin M transmembrane N-terminal domain KY998_21245 PF01670 Glycosyl hydrolase family 12 KY998_21260 PF16657 Maltogenic Amylase, C-terminal domain KY998_21260 PF00128 Alpha amylase, catalytic domain KY998_21265 PF01894 Uncharacterised protein family UPF0047 KY998_21270 PF03060 Nitronate monooxygenase KY998_21280 PF02743 Cache domain KY998_21280 PF00672 HAMP domain KY998_21280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_21285 PF02743 Cache domain KY998_21285 PF00672 HAMP domain KY998_21285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain KY998_21295 PF01965 DJ-1/PfpI family KY998_21300 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_21300 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_21305 PF01594 AI-2E family transporter KY998_21310 PF02673 Bacitracin resistance protein BacA KY998_21315 PF00149 Calcineurin-like phosphoesterase KY998_21325 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase KY998_21340 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) KY998_21365 PF13332 Hemagglutinin repeat KY998_21365 PF05860 haemagglutination activity domain KY998_21365 PF04829 Pre-toxin domain with VENN motif KY998_21400 PF03747 ADP-ribosylglycohydrolase KY998_21410 PF00190 Cupin KY998_21415 PF00842 Alanine racemase, C-terminal domain KY998_21415 PF01168 Alanine racemase, N-terminal domain KY998_21420 PF04072 Leucine carboxyl methyltransferase KY998_21435 PF00171 Aldehyde dehydrogenase family KY998_21440 PF00465 Iron-containing alcohol dehydrogenase KY998_21450 PF12867 DinB superfamily KY998_21465 PF02080 TrkA-C domain KY998_21465 PF02254 TrkA-N domain KY998_21470 PF01470 Pyroglutamyl peptidase KY998_21475 PF18801 response regulator aspartate phosphatase H, N terminal KY998_21490 PF04203 Sortase domain KY998_21495 PF09515 Thiamine transporter protein (Thia_YuaJ) KY998_21500 PF00392 Bacterial regulatory proteins, gntR family KY998_21630 PF00483 Nucleotidyl transferase KY998_21635 PF00534 Glycosyl transferases group 1 KY998_21635 PF08323 Starch synthase catalytic domain KY998_21640 PF00343 Carbohydrate phosphorylase KY998_21650 PF01040 UbiA prenyltransferase family KY998_21665 PF00561 alpha/beta hydrolase fold KY998_21670 PF00378 Enoyl-CoA hydratase/isomerase KY998_21680 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain KY998_21680 PF13378 Enolase C-terminal domain-like KY998_21690 PF07561 Domain of Unknown Function (DUF1540) KY998_21695 PF02322 Cytochrome bd terminal oxidase subunit II KY998_21700 PF01654 Cytochrome bd terminal oxidase subunit I KY998_21705 PF01197 Ribosomal protein L31 KY998_21710 PF01297 Zinc-uptake complex component A periplasmic KY998_21720 PF00484 Carbonic anhydrase KY998_21725 PF01809 Putative membrane protein insertion efficiency factor KY998_21730 PF02664 S-Ribosylhomocysteinase (LuxS) KY998_21735 PF13115 YtkA-like KY998_21745 PF00210 Ferritin-like domain KY998_21750 PF05105 Bacteriophage holin family KY998_21760 PF00293 NUDIX domain KY998_21780 PF00326 Prolyl oligopeptidase family KY998_21785 PF10763 Protein of unknown function (DUF2584) KY998_21795 PF01293 Phosphoenolpyruvate carboxykinase KY998_21800 PF02773 S-adenosylmethionine synthetase, C-terminal domain KY998_21800 PF02772 S-adenosylmethionine synthetase, central domain KY998_21800 PF00438 S-adenosylmethionine synthetase, N-terminal domain KY998_21805 PF13537 Glutamine amidotransferase domain KY998_21805 PF00733 Asparagine synthase KY998_21810 PF13439 Glycosyltransferase Family 4 KY998_21810 PF00534 Glycosyl transferases group 1 KY998_21820 PF00132 Bacterial transferase hexapeptide (six repeats) KY998_21825 PF12146 Serine aminopeptidase, S33 KY998_21830 PF10776 Protein of unknown function (DUF2600) KY998_21835 PF06962 Putative rRNA methylase KY998_21840 PF16199 Radical_SAM C-terminal domain KY998_21840 PF04055 Radical SAM superfamily KY998_21845 PF10732 Protein of unknown function (DUF2524) KY998_21850 PF00392 Bacterial regulatory proteins, gntR family KY998_21855 PF00005 ABC transporter KY998_21870 PF02687 FtsX-like permease family KY998_21870 PF12704 MacB-like periplasmic core domain KY998_21875 PF04791 LMBR1-like membrane protein KY998_21880 PF03180 NLPA lipoprotein KY998_21885 PF07690 Major Facilitator Superfamily KY998_21890 PF14074 Protein of unknown function (DUF4257) KY998_21900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily KY998_21905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family KY998_21905 PF03466 LysR substrate binding domain KY998_21915 PF01738 Dienelactone hydrolase family KY998_21920 PF01370 NAD dependent epimerase/dehydratase family KY998_21925 PF00528 Binding-protein-dependent transport system inner membrane component KY998_21930 PF13416 Bacterial extracellular solute-binding protein KY998_21935 PF17853 GGDEF-like domain KY998_21935 PF12833 Helix-turn-helix domain KY998_21940 PF00528 Binding-protein-dependent transport system inner membrane component KY998_21945 PF07470 Glycosyl Hydrolase Family 88 KY998_21955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold KY998_21955 PF02894 Oxidoreductase family, C-terminal alpha/beta domain KY998_21960 PF04854 Protein of unknown function, DUF624 KY998_21970 PF18801 response regulator aspartate phosphatase H, N terminal KY998_21975 PF00581 Rhodanese-like domain KY998_21980 PF10957 Sporulation protein Cse60 KY998_21985 PF02028 BCCT, betaine/carnitine/choline family transporter KY998_21995 PF14667 Polysaccharide biosynthesis C-terminal domain KY998_21995 PF01943 Polysaccharide biosynthesis protein KY998_22000 PF01479 S4 domain KY998_22000 PF00849 RNA pseudouridylate synthase KY998_22005 PF08220 DeoR-like helix-turn-helix domain KY998_22010 PF00005 ABC transporter KY998_22015 PF05975 Bacterial ABC transporter protein EcsB KY998_22020 PF00860 Permease family KY998_22025 PF01546 Peptidase family M20/M25/M40 KY998_22030 PF10903 Protein of unknown function (DUF2691) KY998_22040 PF00291 Pyridoxal-phosphate dependent enzyme KY998_22055 PF00781 Diacylglycerol kinase catalytic domain KY998_22060 PF00128 Alpha amylase, catalytic domain KY998_22060 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) KY998_22060 PF17999 Pullulanase N1-terminal domain KY998_22065 PF01636 Phosphotransferase enzyme family KY998_22070 PF14165 YtzH-like protein KY998_22075 PF02390 Putative methyltransferase KY998_22080 PF00753 Metallo-beta-lactamase superfamily KY998_22090 PF03413 Peptidase propeptide and YPEB domain KY998_22095 PF05343 M42 glutamyl aminopeptidase KY998_22100 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ KY998_22105 PF00085 Thioredoxin KY998_22110 PF07285 Protein of unknown function (DUF1444) KY998_22115 PF14794 Domain of unknown function (DUF4479) KY998_22115 PF01588 Putative tRNA binding domain KY998_22125 PF01225 Mur ligase family, catalytic domain KY998_22125 PF02875 Mur ligase family, glutamate ligase domain KY998_22125 PF08245 Mur ligase middle domain KY998_22130 PF06103 Bacterial protein of unknown function (DUF948) KY998_22135 PF12732 YtxH-like protein KY998_22140 PF11009 Protein of unknown function (DUF2847) KY998_22150 PF00793 DAHP synthetase I family KY998_22150 PF01817 Chorismate mutase type II KY998_22155 PF00356 Bacterial regulatory proteins, lacI family KY998_22160 PF01618 MotA/TolQ/ExbB proton channel family KY998_22165 PF13677 Membrane MotB of proton-channel complex MotA/MotB KY998_22165 PF00691 OmpA family KY998_22170 PF00850 Histone deacetylase domain KY998_22175 PF00571 CBS domain KY998_22180 PF00583 Acetyltransferase (GNAT) family KY998_22185 PF13193 AMP-binding enzyme C-terminal domain KY998_22185 PF00501 AMP-binding enzyme KY998_22205 PF01479 S4 domain KY998_22205 PF00163 Ribosomal protein S4/S9 N-terminal domain KY998_22220 PF00440 Bacterial regulatory proteins, tetR family KY998_22225 PF02811 PHP domain KY998_22230 PF06160 Septation ring formation regulator, EzrA KY998_22235 PF05525 Branched-chain amino acid transport protein KY998_22240 PF00266 Aminotransferase class-V KY998_22245 PF02568 Thiamine biosynthesis protein (ThiI) KY998_22245 PF02926 THUMP domain KY998_22250 PF00269 Small, acid-soluble spore proteins, alpha/beta type KY998_22255 PF00501 AMP-binding enzyme KY998_22255 PF13193 AMP-binding enzyme C-terminal domain KY998_22260 PF01047 MarR family KY998_22265 PF01513 ATP-NAD kinase KY998_22270 PF01343 Peptidase family S49 KY998_22275 PF06271 RDD family KY998_22280 PF11167 Protein of unknown function (DUF2953) KY998_22285 PF09579 Sporulation protein YtfJ (Spore_YtfJ) KY998_22290 PF08534 Redoxin KY998_22295 PF02384 N-6 DNA Methylase KY998_22300 PF00871 Acetokinase family KY998_22305 PF00994 Probable molybdopterin binding domain KY998_22310 PF00764 Arginosuccinate synthase KY998_22315 PF14698 Argininosuccinate lyase C-terminal KY998_22315 PF00206 Lyase KY998_22335 PF03551 Transcriptional regulator PadR-like family KY998_22335 PF10400 Virulence activator alpha C-term KY998_22340 PF00392 Bacterial regulatory proteins, gntR family KY998_22340 PF07085 DRTGG domain KY998_22340 PF03061 Thioesterase superfamily KY998_22340 PF00571 CBS domain KY998_22345 PF14007 YtpI-like protein KY998_22350 PF01368 DHH family KY998_22350 PF02272 DHHA1 domain KY998_22365 PF14034 Sporulation protein YtrH KY998_22370 PF14579 Helix-hairpin-helix motif KY998_22370 PF17657 Bacterial DNA polymerase III alpha subunit finger domain KY998_22370 PF07733 Bacterial DNA polymerase III alpha NTPase domain KY998_22370 PF01336 OB-fold nucleic acid binding domain KY998_22370 PF02811 PHP domain KY998_22375 PF03949 Malic enzyme, NAD binding domain KY998_22375 PF00390 Malic enzyme, N-terminal domain KY998_22380 PF17848 Acetyl-coA carboxylase zinc finger domain KY998_22380 PF01039 Carboxyl transferase domain KY998_22395 PF00391 PEP-utilising enzyme, mobile domain KY998_22395 PF00224 Pyruvate kinase, barrel domain KY998_22395 PF02887 Pyruvate kinase, alpha/beta domain KY998_22400 PF04186 FxsA cytoplasmic membrane protein KY998_22405 PF01594 AI-2E family transporter KY998_22410 PF04284 Protein of unknown function (DUF441) KY998_22420 PF00722 Glycosyl hydrolases family 16 KY998_22425 PF00285 Citrate synthase, C-terminal domain KY998_22430 PF00180 Isocitrate/isopropylmalate dehydrogenase KY998_22435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain KY998_22435 PF00056 lactate/malate dehydrogenase, NAD binding domain KY998_22445 PF00512 His Kinase A (phospho-acceptor) domain KY998_22445 PF16736 Single Cache-like KY998_22445 PF00989 PAS fold KY998_22445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase KY998_22450 PF01367 5'-3' exonuclease, C-terminal SAM fold KY998_22450 PF00476 DNA polymerase family A KY998_22450 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain KY998_22455 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain KY998_22455 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain KY998_22455 PF06827 Zinc finger found in FPG and IleRS KY998_22460 PF02659 Putative manganese efflux pump KY998_22465 PF01121 Dephospho-CoA kinase KY998_22470 PF00544 Pectate lyase KY998_22475 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain KY998_22475 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain KY998_22480 PF02675 S-adenosylmethionine decarboxylase KY998_22490 PF03477 ATP cone domain KY998_22495 PF07261 Replication initiation and membrane attachment KY998_22500 PF07319 Primosomal protein DnaI N-terminus KY998_22500 PF01695 IstB-like ATP binding protein KY998_22505 PF09335 SNARE associated Golgi protein KY998_22510 PF08812 YtxC-like family KY998_22515 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain KY998_22515 PF02824 TGS domain KY998_22515 PF03129 Anticodon binding domain KY998_22515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) KY998_22520 PF13419 Haloacid dehalogenase-like hydrolase KY998_22535 PF00072 Response regulator receiver domain KY998_22535 PF04397 LytTr DNA-binding domain KY998_22545 PF03788 LrgA family KY998_22550 PF04172 LrgB-like family KY998_22555 PF00707 Translation initiation factor IF-3, C-terminal domain KY998_22555 PF05198 Translation initiation factor IF-3, N-terminal domain KY998_22560 PF01632 Ribosomal protein L35 KY998_22565 PF00453 Ribosomal protein L20 KY998_22570 PF06961 Protein of unknown function (DUF1294) KY998_22580 PF05343 M42 glutamyl aminopeptidase KY998_22585 PF04616 Glycosyl hydrolases family 43 KY998_22590 PF02610 L-arabinose isomerase KY998_22590 PF11762 L-arabinose isomerase C-terminal domain KY998_22595 PF02782 FGGY family of carbohydrate kinases, C-terminal domain KY998_22595 PF00370 FGGY family of carbohydrate kinases, N-terminal domain KY998_22600 PF00596 Class II Aldolase and Adducin N-terminal domain KY998_22605 PF13685 Iron-containing alcohol dehydrogenase KY998_22610 PF01547 Bacterial extracellular solute-binding protein KY998_22615 PF00528 Binding-protein-dependent transport system inner membrane component KY998_22620 PF00528 Binding-protein-dependent transport system inner membrane component KY998_22625 PF06964 Alpha-L-arabinofuranosidase C-terminal domain KY998_22655 PF14098 Small, acid-soluble spore protein I KY998_22660 PF00588 SpoU rRNA Methylase family KY998_22660 PF08032 RNA 2'-O ribose methyltransferase substrate binding KY998_22665 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain KY998_22665 PF01409 tRNA synthetases class II core domain (F) KY998_22670 PF01588 Putative tRNA binding domain KY998_22670 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain KY998_22670 PF03483 B3/4 domain KY998_22670 PF03147 Ferredoxin-fold anticodon binding domain KY998_22670 PF03484 tRNA synthetase B5 domain KY998_22685 PF11858 Domain of unknown function (DUF3378) KY998_22685 PF01351 Ribonuclease HII KY998_22690 PF05164 Cell division protein ZapA KY998_22700 PF02811 PHP domain KY998_22700 PF14716 Helix-hairpin-helix domain KY998_22700 PF14791 DNA polymerase beta thumb KY998_22710 PF03994 Domain of Unknown Function (DUF350) KY998_22720 PF08359 YsiA-like protein, C-terminal region KY998_22720 PF00440 Bacterial regulatory proteins, tetR family KY998_22725 PF00378 Enoyl-CoA hydratase/isomerase KY998_22730 PF01012 Electron transfer flavoprotein domain KY998_22735 PF01012 Electron transfer flavoprotein domain KY998_22735 PF00766 Electron transfer flavoprotein FAD-binding domain KY998_22740 PF00085 Thioredoxin KY998_22745 PF08459 UvrC Helix-hairpin-helix N-terminal KY998_22745 PF02151 UvrB/uvrC motif KY998_22745 PF01541 GIY-YIG catalytic domain KY998_22755 PF10702 Protein of unknown function (DUF2507) KY998_22760 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit KY998_22765 PF00890 FAD binding domain KY998_22765 PF02910 Fumarate reductase flavoprotein C-term KY998_22770 PF13085 2Fe-2S iron-sulfur cluster binding domain KY998_22770 PF13183 4Fe-4S dicluster domain KY998_22775 PF03061 Thioesterase superfamily KY998_22780 PF00106 short chain dehydrogenase KY998_22785 PF00196 Bacterial regulatory proteins, luxR family KY998_22790 PF01047 MarR family KY998_22795 PF01177 Asp/Glu/Hydantoin racemase KY998_22800 PF10646 Sporulation and spore germination KY998_22805 PF03725 3' exoribonuclease family, domain 2 KY998_22805 PF01138 3' exoribonuclease family, domain 1 KY998_22810 PF01725 Ham1 family KY998_22815 PF12850 Calcineurin-like phosphoesterase superfamily domain KY998_22835 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain KY998_22835 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase KY998_22845 PF01063 Amino-transferase class IV KY998_22850 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain KY998_22850 PF00205 Thiamine pyrophosphate enzyme, central domain KY998_22850 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain KY998_22855 PF01842 ACT domain KY998_22855 PF10369 Small subunit of acetolactate synthase KY998_22860 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain KY998_22860 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain KY998_22865 PF00682 HMGL-like KY998_22865 PF08502 LeuA allosteric (dimerisation) domain KY998_22870 PF00180 Isocitrate/isopropylmalate dehydrogenase KY998_22875 PF00330 Aconitase family (aconitate hydratase) KY998_22880 PF00694 Aconitase C-terminal domain KY998_22890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase KY998_22890 PF05698 Bacterial trigger factor protein (TF) C-terminus KY998_22890 PF05697 Bacterial trigger factor protein (TF) KY998_22895 PF07724 AAA domain (Cdc48 subfamily) KY998_22895 PF10431 C-terminal, D2-small domain, of ClpB protein KY998_22895 PF06689 ClpX C4-type zinc finger KY998_22905 PF00004 ATPase family associated with various cellular activities (AAA) KY998_22905 PF05362 Lon protease (S16) C-terminal proteolytic domain KY998_22905 PF02190 ATP-dependent protease La (LON) substrate-binding domain KY998_22910 PF01926 50S ribosome-binding GTPase KY998_22920 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain KY998_22920 PF01488 Shikimate / quinate 5-dehydrogenase KY998_22920 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain KY998_22925 PF01578 Cytochrome C assembly protein KY998_22930 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain KY998_22930 PF03900 Porphobilinogen deaminase, C-terminal domain KY998_22935 PF02602 Uroporphyrinogen-III synthase HemD KY998_22940 PF00490 Delta-aminolevulinic acid dehydratase KY998_22945 PF00202 Aminotransferase class-III KY998_22950 PF01476 LysM domain KY998_22965 PF08264 Anticodon-binding domain of tRNA KY998_22965 PF00133 tRNA synthetases class I (I, L, M and V) KY998_22965 PF10458 Valyl tRNA synthetase tRNA binding arm KY998_22970 PF02875 Mur ligase family, glutamate ligase domain KY998_22970 PF08245 Mur ligase middle domain KY998_22975 PF01478 Type IV leader peptidase family KY998_22975 PF06750 Bacterial Peptidase A24 N-terminal domain KY998_22980 PF05036 Sporulation related domain KY998_22985 PF00665 Integrase core domain KY998_22985 PF13333 Integrase core domain KY998_22990 PF02545 Maf-like protein KY998_22995 PF04002 RadC-like JAB domain KY998_23005 PF04085 rod shape-determining protein MreC KY998_23010 PF04093 rod shape-determining protein MreD KY998_23015 PF03775 Septum formation inhibitor MinC, C-terminal domain KY998_23020 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain KY998_23025 PF01022 Bacterial regulatory protein, arsR family KY998_23030 PF08327 Activator of Hsp90 ATPase homolog 1-like protein KY998_23035 PF01551 Peptidase family M23 KY998_23040 PF02163 Peptidase family M50 KY998_23045 PF00829 Ribosomal prokaryotic L21 protein KY998_23050 PF04327 Cysteine protease Prp KY998_23055 PF01016 Ribosomal L27 protein KY998_23060 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain KY998_23060 PF14682 Sporulation initiation phospho-transferase B, C-terminal KY998_23110 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle KY998_23130 PF00155 Aminotransferase class I and II KY998_23140 PF14431 YwqJ-like deaminase KY998_23140 PF14449 Pre-toxin TG KY998_23140 PF04740 LXG domain of WXG superfamily KY998_23150 PF06445 GyrI-like small molecule binding domain KY998_23165 PF00005 ABC transporter KY998_23165 PF12848 ABC transporter KY998_23170 PF00005 ABC transporter KY998_23175 PF00005 ABC transporter KY998_23175 PF12848 ABC transporter KY998_23230 PF00356 Bacterial regulatory proteins, lacI family KY998_23235 PF00356 Bacterial regulatory proteins, lacI family KY998_23340 PF01464 Transglycosylase SLT domain KY998_23340 PF01551 Peptidase family M23 KY998_23340 PF10145 Phage-related minor tail protein KY998_23350 PF01551 Peptidase family M23 KY998_23350 PF10145 Phage-related minor tail protein KY998_23350 PF01464 Transglycosylase SLT domain KY998_23365 PF07690 Major Facilitator Superfamily KY998_23390 PF13472 GDSL-like Lipase/Acylhydrolase family KY998_23400 PF08240 Alcohol dehydrogenase GroES-like domain KY998_23400 PF00107 Zinc-binding dehydrogenase KY998_23415 PF00072 Response regulator receiver domain KY998_23415 PF04703 FaeA-like protein KY998_23420 PF00072 Response regulator receiver domain KY998_23420 PF12431 Transcriptional regulator KY998_23450 PF00149 Calcineurin-like phosphoesterase KY998_23450 PF12320 Type 5 capsule protein repressor C-terminal domain KY998_23470 PF18801 response regulator aspartate phosphatase H, N terminal KY998_23495 PF00326 Prolyl oligopeptidase family KY998_23530 PF01471 Putative peptidoglycan binding domain KY998_23530 PF01510 N-acetylmuramoyl-L-alanine amidase KY998_23590 PF18801 response regulator aspartate phosphatase H, N terminal KY998_23595 PF18801 response regulator aspartate phosphatase H, N terminal KY998_23625 PF12833 Helix-turn-helix domain KY998_23625 PF01497 Periplasmic binding protein KY998_23630 PF00072 Response regulator receiver domain KY998_23630 PF12833 Helix-turn-helix domain KY998_23635 PF04740 LXG domain of WXG superfamily KY998_23635 PF14449 Pre-toxin TG KY998_23695 PF00664 ABC transporter transmembrane region KY998_23695 PF00005 ABC transporter KY998_23695 PF03412 Peptidase C39 family KY998_23700 PF03412 Peptidase C39 family KY998_23700 PF00005 ABC transporter KY998_23700 PF00664 ABC transporter transmembrane region KY998_23715 PF05105 Bacteriophage holin family KY998_23735 PF00392 Bacterial regulatory proteins, gntR family KY998_23735 PF00155 Aminotransferase class I and II KY998_23755 PF00005 ABC transporter KY998_23760 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY998_23760 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_23760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_23765 PF00441 Acyl-CoA dehydrogenase, C-terminal domain KY998_23765 PF02770 Acyl-CoA dehydrogenase, middle domain KY998_23765 PF02771 Acyl-CoA dehydrogenase, N-terminal domain KY998_23810 PF13426 PAS domain KY998_23810 PF00158 Sigma-54 interaction domain KY998_23810 PF02954 Bacterial regulatory protein, Fis family KY998_23820 PF00528 Binding-protein-dependent transport system inner membrane component KY998_23890 PF03190 Protein of unknown function, DUF255 KY998_23900 PF01968 Hydantoinase/oxoprolinase KY998_23900 PF05378 Hydantoinase/oxoprolinase N-terminal region KY998_23905 PF10415 Fumarase C C-terminus KY998_23905 PF00206 Lyase KY998_23915 PF03323 Bacillus/Clostridium GerA spore germination protein KY998_23920 PF03323 Bacillus/Clostridium GerA spore germination protein KY998_23950 PF04740 LXG domain of WXG superfamily KY998_23985 PF01235 Sodium:alanine symporter family KY998_23990 PF00378 Enoyl-CoA hydratase/isomerase KY998_23995 PF00106 short chain dehydrogenase KY998_24045 PF01032 FecCD transport family KY998_24050 PF07690 Major Facilitator Superfamily KY998_24060 PF00199 Catalase KY998_24060 PF06628 Catalase-related immune-responsive KY998_24065 PF00199 Catalase KY998_24065 PF06628 Catalase-related immune-responsive KY998_24070 PF00199 Catalase KY998_24070 PF06628 Catalase-related immune-responsive KY998_24075 PF00005 ABC transporter KY998_24080 PF00005 ABC transporter KY998_24090 PF00324 Amino acid permease KY998_24095 PF00324 Amino acid permease KY998_24100 PF00324 Amino acid permease