locus-tag	class	description
ALPS_126	PF00692	dUTPase
ALPS_132	PF00317	Ribonucleotide reductase, all-alpha domain
ALPS_132	PF03477	ATP cone domain
ALPS_132	PF02867	Ribonucleotide reductase, barrel domain
ALPS_135	PF00268	Ribonucleotide reductase, small chain
ALPS_139	PF00085	Thioredoxin
ALPS_154	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
ALPS_154	PF01367	5'-3' exonuclease, C-terminal SAM fold
ALPS_154	PF00476	DNA polymerase family A
ALPS_156	PF01367	5'-3' exonuclease, C-terminal SAM fold
ALPS_156	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
ALPS_156	PF00476	DNA polymerase family A
ALPS_176	PF00154	recA bacterial DNA recombination protein
ALPS_223	PF04542	Sigma-70 region 2 
ALPS_223	PF04539	Sigma-70 region 3
ALPS_223	PF04545	Sigma-70, region 4
ALPS_51	PF00186	Dihydrofolate reductase
ALPS_57	PF00303	Thymidylate synthase
ALPS_66	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
ALPS_68	PF12123	N-acetylmuramoyl-l-alanine amidase
ALPS_68	PF01510	N-acetylmuramoyl-L-alanine amidase
ALPS_95	PF06725	3D domain
ALPS_95	PF01476	LysM domain
ALPS_98	PF17890	Peptidoglycan hydrolase LytB WW-like domain 
ALPS_98	PF18342	Endo-beta-N-acetylglucosaminidase LytB WW domain
ALPS_98	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
ALPS_98	PF01473	Putative cell wall binding repeat
ALPS_99	PF00877	NlpC/P60 family