locus-tag	class	description
SMUDGE_100	PF00877	NlpC/P60 family
SMUDGE_126	PF00692	dUTPase
SMUDGE_132	PF00317	Ribonucleotide reductase, all-alpha domain
SMUDGE_132	PF02867	Ribonucleotide reductase, barrel domain
SMUDGE_132	PF03477	ATP cone domain
SMUDGE_135	PF00268	Ribonucleotide reductase, small chain
SMUDGE_139	PF00085	Thioredoxin
SMUDGE_154	PF01367	5'-3' exonuclease, C-terminal SAM fold
SMUDGE_154	PF09281	Taq polymerase, exonuclease
SMUDGE_154	PF00476	DNA polymerase family A
SMUDGE_154	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SMUDGE_155	PF13392	HNH endonuclease
SMUDGE_156	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
SMUDGE_156	PF01367	5'-3' exonuclease, C-terminal SAM fold
SMUDGE_156	PF00476	DNA polymerase family A
SMUDGE_173	PF00154	recA bacterial DNA recombination protein
SMUDGE_221	PF04542	Sigma-70 region 2 
SMUDGE_221	PF04545	Sigma-70, region 4
SMUDGE_221	PF04539	Sigma-70 region 3
SMUDGE_53	PF00186	Dihydrofolate reductase
SMUDGE_59	PF00303	Thymidylate synthase
SMUDGE_67	PF04095	Nicotinate phosphoribosyltransferase (NAPRTase) family
SMUDGE_69	PF12123	N-acetylmuramoyl-l-alanine amidase
SMUDGE_69	PF01510	N-acetylmuramoyl-L-alanine amidase
SMUDGE_96	PF01476	LysM domain
SMUDGE_96	PF06725	3D domain
SMUDGE_99	PF17890	Peptidoglycan hydrolase LytB WW-like domain 
SMUDGE_99	PF18342	Endo-beta-N-acetylglucosaminidase LytB WW domain
SMUDGE_99	PF01832	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
SMUDGE_99	PF01473	Putative cell wall binding repeat