BMBtpLA4_42 629f27a564103d3bc9cf51404cfcd478 350 SMART SM00644 34 168 2.0E-22 T 30-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BMBtpLA4_42 629f27a564103d3bc9cf51404cfcd478 350 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 49 167 3.8E-12 T 30-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BMBtpLA4_42 629f27a564103d3bc9cf51404cfcd478 350 SUPERFAMILY SSF55846 36 186 1.8E-31 T 30-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BMBtpLA4_42 629f27a564103d3bc9cf51404cfcd478 350 Gene3D G3DSA:2.30.30.40 220 271 2.4E-7 T 30-10-2018 BMBtpLA4_42 629f27a564103d3bc9cf51404cfcd478 350 Gene3D G3DSA:3.40.80.10 17 202 1.3E-52 T 30-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 Gene3D G3DSA:3.40.50.1390 2 133 1.0E-47 T 30-10-2018 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 SMART SM00857 4 150 2.5E-57 T 30-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 Pfam PF13408 Recombinase zinc beta ribbon domain 266 333 1.4E-10 T 30-10-2018 IPR025827 Recombinase zinc beta ribbon domain BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 SUPERFAMILY SSF53041 3 149 3.01E-40 T 30-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 Gene3D G3DSA:1.10.10.2600 134 256 7.0E-35 T 30-10-2018 IPR038109 DNA-binding recombinase domain superfamily BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 Pfam PF00239 Resolvase, N terminal domain 4 148 9.8E-44 T 30-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 Pfam PF07508 Recombinase 172 252 8.8E-13 T 30-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 BMBtpLA4_1 5ec1de615435beebdc9fd0470e7384e9 451 ProSitePatterns PS00397 Site-specific recombinases active site. 7 15 - T 30-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 Gene3D G3DSA:2.10.109.10 90 212 2.1E-23 T 30-10-2018 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 SUPERFAMILY SSF51306 85 210 6.1E-22 T 30-10-2018 IPR036286 LexA/Signal peptidase-like superfamily BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 131 9.9E-5 T 30-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 145 156 9.9E-5 T 30-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 160 172 9.9E-5 T 30-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 SUPERFAMILY SSF47413 1 63 4.9E-14 T 30-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 Pfam PF01381 Helix-turn-helix 7 56 2.3E-12 T 30-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 Pfam PF00717 Peptidase S24-like 124 190 6.0E-9 T 30-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 Gene3D G3DSA:1.10.260.40 1 63 7.7E-22 T 30-10-2018 BMBtpLA4_2 fbcdd90571016261fa34bcf9f6dd16d7 218 SMART SM00530 6 61 1.0E-10 T 30-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BMBtpLA4_6 9bd1a82f975ec4bfb2ffe358a7cc86c1 52 Gene3D G3DSA:3.30.40.30 2 52 2.7E-7 T 30-10-2018 IPR023118 YqaI domain superfamily BMBtpLA4_6 9bd1a82f975ec4bfb2ffe358a7cc86c1 52 ProSitePatterns PS00283 Soybean trypsin inhibitor (Kunitz) protease inhibitors family signature. 9 25 - T 30-10-2018 IPR002160 Proteinase inhibitor I3, Kunitz legume GO:0004866 BMBtpLA4_6 9bd1a82f975ec4bfb2ffe358a7cc86c1 52 Pfam PF09466 Hypothetical protein Yqai 11 43 4.0E-8 T 30-10-2018 IPR018474 Uncharacterised protein family YqaI BMBtpLA4_6 9bd1a82f975ec4bfb2ffe358a7cc86c1 52 SUPERFAMILY SSF160713 3 51 3.14E-18 T 30-10-2018 IPR023118 YqaI domain superfamily BMBtpLA4_11 5761899681de2755866fbf7f2e1b5923 92 Gene3D G3DSA:3.40.1350.10 1 89 8.7E-14 T 30-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 BMBtpLA4_11 5761899681de2755866fbf7f2e1b5923 92 SUPERFAMILY SSF52980 5 87 1.97E-15 T 30-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 BMBtpLA4_11 5761899681de2755866fbf7f2e1b5923 92 Pfam PF01870 Archaeal holliday junction resolvase (hjc) 8 71 1.1E-4 T 30-10-2018 IPR002732 Holliday junction resolvase Hjc BMBtpLA4_11 5761899681de2755866fbf7f2e1b5923 92 SMART SM00990 1 83 0.0026 T 30-10-2018 IPR014883 VRR-NUC domain GO:0016788 Reactome: R-HSA-6783310 BMBtpLA4_40 0f396a4383b72c598b74624789d02044 423 Pfam PF10651 Domain of unknown function (DUF2479) 12 137 1.9E-15 T 30-10-2018 IPR018913 Domain of unknown function DUF2479 BMBtpLA4_40 0f396a4383b72c598b74624789d02044 423 Gene3D G3DSA:2.60.40.3350 5 116 1.9E-11 T 30-10-2018 BMBtpLA4_29 7008a38cba3320239d8cde807eb689de 445 SUPERFAMILY SSF56563 150 425 4.18E-25 T 30-10-2018 BMBtpLA4_29 7008a38cba3320239d8cde807eb689de 445 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 43 425 1.0E-33 T 30-10-2018 IPR024455 Phage capsid BMBtpLA4_29 7008a38cba3320239d8cde807eb689de 445 Pfam PF05065 Phage capsid family 152 426 2.8E-40 T 30-10-2018 IPR024455 Phage capsid BMBtpLA4_28 b4d6f9d03d6f3d00cd7ee1eba6207b00 193 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 11 152 2.4E-21 T 30-10-2018 IPR006433 Prohead protease BMBtpLA4_28 b4d6f9d03d6f3d00cd7ee1eba6207b00 193 Pfam PF04586 Caudovirus prohead serine protease 8 156 1.4E-45 T 30-10-2018 IPR006433 Prohead protease BMBtpLA4_47 eaaa9b00566ecb61a7dcf7460a47de32 74 SUPERFAMILY SSF46785 3 69 3.7E-24 T 30-10-2018 IPR036390 Winged helix DNA-binding domain superfamily BMBtpLA4_47 eaaa9b00566ecb61a7dcf7460a47de32 74 Gene3D G3DSA:1.10.10.10 1 70 9.6E-29 T 30-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily BMBtpLA4_47 eaaa9b00566ecb61a7dcf7460a47de32 74 Pfam PF01726 LexA DNA binding domain 1 65 4.6E-28 T 30-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 SUPERFAMILY SSF52540 2 214 6.71E-25 T 30-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 Gene3D G3DSA:3.40.50.300 261 403 1.2E-22 T 30-10-2018 BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 Pfam PF00271 Helicase conserved C-terminal domain 268 367 1.2E-7 T 30-10-2018 IPR001650 Helicase, C-terminal BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 Pfam PF00176 SNF2 family N-terminal domain 46 218 7.5E-15 T 30-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 SMART SM00487 2 170 2.3E-4 T 30-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 SUPERFAMILY SSF52540 107 403 7.45E-29 T 30-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BMBtpLA4_7 1042aff9fdf70593166a88e6f777ccd4 407 Gene3D G3DSA:3.40.50.10810 5 205 1.0E-23 T 30-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily BMBtpLA4_20 9c72f73185fa154034d35f6b47debf49 92 SUPERFAMILY SSF88659 23 87 6.17E-9 T 30-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like BMBtpLA4_20 9c72f73185fa154034d35f6b47debf49 92 Gene3D G3DSA:1.20.140.160 3 86 3.8E-7 T 30-10-2018 BMBtpLA4_43 606d0d776c7fc5051542d34d31c6838b 340 Pfam PF14311 Probable Zinc-ribbon domain 95 152 7.2E-13 T 30-10-2018 IPR025487 Probable Zinc-ribbon domain BMBtpLA4_43 606d0d776c7fc5051542d34d31c6838b 340 Pfam PF14311 Probable Zinc-ribbon domain 16 69 2.8E-16 T 30-10-2018 IPR025487 Probable Zinc-ribbon domain BMBtpLA4_43 606d0d776c7fc5051542d34d31c6838b 340 Pfam PF14311 Probable Zinc-ribbon domain 168 226 3.1E-7 T 30-10-2018 IPR025487 Probable Zinc-ribbon domain BMBtpLA4_43 606d0d776c7fc5051542d34d31c6838b 340 Pfam PF14311 Probable Zinc-ribbon domain 238 297 9.2E-14 T 30-10-2018 IPR025487 Probable Zinc-ribbon domain BMBtpLA4_37 eafbcb4a130077a653127101549b8f3a 1173 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 279 625 1.1E-8 T 30-10-2018 IPR010090 Phage tail tape measure protein BMBtpLA4_37 eafbcb4a130077a653127101549b8f3a 1173 Pfam PF10145 Phage-related minor tail protein 321 517 5.0E-25 T 30-10-2018 IPR010090 Phage tail tape measure protein BMBtpLA4_37 eafbcb4a130077a653127101549b8f3a 1173 SUPERFAMILY SSF48371 682 978 1.3E-5 T 30-10-2018 IPR016024 Armadillo-type fold BMBtpLA4_3 602063c01c764c48fb5b11c9320ae9cc 78 Pfam PF01381 Helix-turn-helix 5 57 1.1E-8 T 30-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BMBtpLA4_3 602063c01c764c48fb5b11c9320ae9cc 78 Gene3D G3DSA:1.10.260.40 3 75 6.8E-14 T 30-10-2018 BMBtpLA4_3 602063c01c764c48fb5b11c9320ae9cc 78 SMART SM00530 4 59 1.6E-8 T 30-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 BMBtpLA4_3 602063c01c764c48fb5b11c9320ae9cc 78 SUPERFAMILY SSF47413 4 64 1.01E-12 T 30-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 BMBtpLA4_24 7055145c60cd309adaacc6ffcb0fffea 575 Gene3D G3DSA:3.40.50.300 10 270 4.4E-9 T 30-10-2018 BMBtpLA4_24 7055145c60cd309adaacc6ffcb0fffea 575 Pfam PF03354 Phage Terminase 77 554 6.9E-61 T 30-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type BMBtpLA4_17 da53e211e6b45214478114686b3839c8 562 SUPERFAMILY SSF56672 232 558 2.11E-38 T 30-10-2018 BMBtpLA4_17 da53e211e6b45214478114686b3839c8 562 SUPERFAMILY SSF53098 2 179 3.5E-8 T 30-10-2018 IPR012337 Ribonuclease H-like superfamily BMBtpLA4_17 da53e211e6b45214478114686b3839c8 562 Gene3D G3DSA:3.90.1600.10 257 428 2.3E-7 T 30-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 BMBtpLA4_22 7acdd1b6549d15599ebabbf28339f7f3 130 Pfam PF01844 HNH endonuclease 65 111 6.8E-13 T 30-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 BMBtpLA4_22 7acdd1b6549d15599ebabbf28339f7f3 130 Gene3D G3DSA:3.30.40.60 14 125 3.8E-6 T 30-10-2018 BMBtpLA4_22 7acdd1b6549d15599ebabbf28339f7f3 130 SMART SM00507 52 107 2.9E-8 T 30-10-2018 IPR003615 HNH nuclease BMBtpLA4_15 195530bc639f0d182491c23697330b1d 163 Pfam PF05037 Protein of unknown function (DUF669) 33 96 7.6E-10 T 30-10-2018 IPR007731 Protein of unknown function DUF669 BMBtpLA4_13 09b09a8d885cc7189267fb25b51c00fc 644 Pfam PF13479 AAA domain 272 474 1.6E-41 T 30-10-2018 BMBtpLA4_13 09b09a8d885cc7189267fb25b51c00fc 644 Pfam PF12705 PD-(D/E)XK nuclease superfamily 4 195 2.3E-13 T 30-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type BMBtpLA4_41 fda4abbf126997454fc966e9b85cec9c 76 Pfam PF10960 BhlA holin family 2 66 2.6E-11 T 30-10-2018 IPR024405 Prophage protein BhlA/UviB BMBtpLA4_41 fda4abbf126997454fc966e9b85cec9c 76 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 1 69 7.0E-30 T 30-10-2018 IPR024405 Prophage protein BhlA/UviB BMBtpLA4_33 654b381f70bf6cca856021febef578c6 125 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 17 86 5.2E-8 T 30-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BMBtpLA4_33 654b381f70bf6cca856021febef578c6 125 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 120 8.2E-9 T 30-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component BMBtpLA4_19 4813da5f9e35176ea659c875158bfa86 620 SUPERFAMILY SSF52540 353 502 2.86E-16 T 30-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase BMBtpLA4_19 4813da5f9e35176ea659c875158bfa86 620 Gene3D G3DSA:3.40.50.300 332 521 1.2E-11 T 30-10-2018 BMBtpLA4_19 4813da5f9e35176ea659c875158bfa86 620 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 292 592 1.1E-67 T 30-10-2018 IPR006500 DNA primase, phage/plasmid BMBtpLA4_19 4813da5f9e35176ea659c875158bfa86 620 Pfam PF03288 Poxvirus D5 protein-like 547 602 4.0E-5 T 30-10-2018 IPR004968 DNA primase/nucleoside triphosphatase, C-terminal BMBtpLA4_39 9546443334470ab198bdf941b6e8afdb 780 Pfam PF13884 Chaperone of endosialidase 654 700 1.5E-5 T 30-10-2018 IPR030392 Intramolecular chaperone auto-processing domain BMBtpLA4_39 9546443334470ab198bdf941b6e8afdb 780 Pfam PF06605 Prophage endopeptidase tail 80 357 1.6E-17 T 30-10-2018 IPR010572 Prophage tail endopeptidase BMBtpLA4_39 9546443334470ab198bdf941b6e8afdb 780 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 27 347 2.0E-46 T 30-10-2018 IPR007119 Phage minor structural protein, N-terminal domain BMBtpLA4_21 9158eac5754a15d6a3ce64f33f3f53af 97 Pfam PF07498 Rho termination factor, N-terminal domain 63 90 1.8E-6 T 30-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 BMBtpLA4_26 b24af79461afb32338427efd36b2eb11 88 Pfam PF13876 Phage protein (N4 Gp49/phage Sf6 gene 66) family 5 81 1.8E-25 T 30-10-2018 IPR025915 Phage protein (N4 Gp49/phage Sf6 gene 66) family BMBtpLA4_23 c7c49c0ff1bf9be79a6f2e383754f486 145 Pfam PF05119 Phage terminase, small subunit 20 106 3.3E-6 T 30-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family BMBtpLA4_27 ffd358f237f7d16023c3243288089bd5 394 Pfam PF04860 Phage portal protein 54 355 1.1E-30 T 30-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein BMBtpLA4_38 62d3524a5f6b848f71665a633c5675c7 227 Pfam PF05709 Phage tail protein 27 226 1.5E-10 T 30-10-2018 IPR008841 Siphovirus-type tail component BMBtpLA4_34 ffa586f7d62facb474565a379601aa47 211 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 12 194 1.1E-10 T 30-10-2018 IPR006490 Phage major tail protein, phi13 family