BpOF4_00010 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_00080 SM00448 cheY-homologous receiver domain BpOF4_00090 SM00382 ATPases associated with a variety of cellular activities BpOF4_00090 SM00962 SRP54-type protein, GTPase domain BpOF4_00125 SM00448 cheY-homologous receiver domain BpOF4_00180 SM00382 ATPases associated with a variety of cellular activities BpOF4_00220 SM00382 ATPases associated with a variety of cellular activities BpOF4_00220 SM01086 C-terminal, D2-small domain, of ClpB protein BpOF4_00240 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BpOF4_00240 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BpOF4_00240 SM00493 BpOF4_00240 BpOF4_00250 SM00881 CoA binding domain BpOF4_00320 SM00382 ATPases associated with a variety of cellular activities BpOF4_00320 SM00962 SRP54-type protein, GTPase domain BpOF4_00320 SM00963 SRP54-type protein, helical bundle domain BpOF4_00330 SM00382 ATPases associated with a variety of cellular activities BpOF4_00330 SM00962 SRP54-type protein, GTPase domain BpOF4_00330 SM00963 SRP54-type protein, helical bundle domain BpOF4_00335 SM00968 SMC proteins Flexible Hinge Domain BpOF4_00345 SM00358 Double-stranded RNA binding motif BpOF4_00345 SM00535 Ribonuclease III family BpOF4_00350 SM00823 Phosphopantetheine attachment site BpOF4_00355 SM00822 BpOF4_00355 BpOF4_00360 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BpOF4_00375 SM00487 DEAD-like helicases superfamily BpOF4_00375 SM00490 helicase superfamily c-terminal domain BpOF4_00395 SM01120 BpOF4_00395 BpOF4_00395 SM01121 BpOF4_00395 BpOF4_00425 SM00220 Serine/Threonine protein kinases, catalytic domain BpOF4_00425 SM00740 BpOF4_00425 BpOF4_00430 SM00331 Sigma factor PP2C-like phosphatases BpOF4_00430 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BpOF4_00445 SM00487 DEAD-like helicases superfamily BpOF4_00445 SM00490 helicase superfamily c-terminal domain BpOF4_00455 SM01409 BpOF4_00455 BpOF4_00460 SM00072 Guanylate kinase homologues. BpOF4_00475 SM00831 Cation transporter/ATPase, N-terminus BpOF4_00520 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family BpOF4_00535 SM00851 MGS-like domain BpOF4_00535 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BpOF4_00540 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BpOF4_00565 SM00363 S4 RNA-binding domain BpOF4_00590 SM00363 S4 RNA-binding domain BpOF4_00635 SM00864 Tubulin/FtsZ family, GTPase domain BpOF4_00635 SM00865 Tubulin/FtsZ family, C-terminal domain BpOF4_00640 SM00842 Cell division protein FtsA BpOF4_00705 SM00740 BpOF4_00705 BpOF4_00710 SM00740 BpOF4_00710 BpOF4_00780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_00940 SM00878 Biotin carboxylase C-terminal domain BpOF4_00965 SM00670 Large family of predicted nucleotide-binding domains BpOF4_00985 SM00838 Elongation factor G C-terminus BpOF4_01075 SM00861 Transketolase, pyrimidine binding domain BpOF4_01105 SM00849 Metallo-beta-lactamase superfamily BpOF4_01170 SM01350 BpOF4_01170 BpOF4_01215 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_01215 SM00876 Biotin and Thiamin Synthesis associated domain BpOF4_01270 SM00450 Rhodanese Homology Domain BpOF4_01270 SM00849 Metallo-beta-lactamase superfamily BpOF4_01285 SM00450 Rhodanese Homology Domain BpOF4_01305 SM01117 BpOF4_01305 BpOF4_01365 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_01365 SM00091 PAS domain BpOF4_01365 SM00387 Histidine kinase-like ATPases BpOF4_01365 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_01415 SM00861 Transketolase, pyrimidine binding domain BpOF4_01430 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BpOF4_01435 SM00091 PAS domain BpOF4_01435 SM00382 ATPases associated with a variety of cellular activities BpOF4_01460 SM00448 cheY-homologous receiver domain BpOF4_01475 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_01490 SM00363 S4 RNA-binding domain BpOF4_01495 SM00861 Transketolase, pyrimidine binding domain BpOF4_01540 SM00878 Biotin carboxylase C-terminal domain BpOF4_01590 SM00382 ATPases associated with a variety of cellular activities BpOF4_01600 SM00841 Elongation factor P, C-terminal BpOF4_01600 SM01185 BpOF4_01600 BpOF4_01630 SM00529 Helix-turn-helix diphteria tox regulatory element BpOF4_01660 SM00450 Rhodanese Homology Domain BpOF4_01680 SM00487 DEAD-like helicases superfamily BpOF4_01680 SM00490 helicase superfamily c-terminal domain BpOF4_01695 SM00849 Metallo-beta-lactamase superfamily BpOF4_01735 SM01234 BpOF4_01735 BpOF4_01775 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_01855 SM00954 Region found in RelA / SpoT proteins BpOF4_01865 SM01118 BpOF4_01865 BpOF4_01875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BpOF4_01900 SM00155 Phospholipase D. Active site motifs. BpOF4_01945 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_01970 SM00046 Diacylglycerol kinase catalytic domain (presumed) BpOF4_01980 SM01007 Class II Aldolase and Adducin N-terminal domain BpOF4_02020 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BpOF4_02020 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BpOF4_02020 SM00493 BpOF4_02020 BpOF4_02035 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_02060 SM00257 Lysin motif BpOF4_02070 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_02085 SM00825 Beta-ketoacyl synthase BpOF4_02160 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BpOF4_02160 SM01209 BpOF4_02160 BpOF4_02165 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain BpOF4_02185 SM00859 Semialdehyde dehydrogenase, NAD binding domain BpOF4_02240 SM00448 cheY-homologous receiver domain BpOF4_02240 SM00850 LytTr DNA-binding domain BpOF4_02245 SM00387 Histidine kinase-like ATPases BpOF4_02250 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_02270 SM00487 DEAD-like helicases superfamily BpOF4_02270 SM00490 helicase superfamily c-terminal domain BpOF4_02315 SM00450 Rhodanese Homology Domain BpOF4_02325 SM00354 helix_turn _helix lactose operon repressor BpOF4_02345 SM00642 Alpha-amylase domain BpOF4_02350 SM00642 Alpha-amylase domain BpOF4_02360 SM00909 Sporulation and spore germination BpOF4_02410 SM00382 ATPases associated with a variety of cellular activities BpOF4_02410 SM00448 cheY-homologous receiver domain BpOF4_02415 SM00062 Bacterial periplasmic substrate-binding proteins BpOF4_02415 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_02415 SM00387 Histidine kinase-like ATPases BpOF4_02415 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_02420 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_02430 SM00052 Putative diguanylate phosphodiesterase BpOF4_02480 SM00833 Cobalamin synthesis protein cobW C-terminal domain BpOF4_02490 SM00914 BpOF4_02490 BpOF4_02510 SM00849 Metallo-beta-lactamase superfamily BpOF4_02515 SM00448 cheY-homologous receiver domain BpOF4_02520 SM00260 Two component signalling adaptor domain BpOF4_02525 SM00073 Histidine Phosphotransfer domain BpOF4_02525 SM00260 Two component signalling adaptor domain BpOF4_02525 SM00387 Histidine kinase-like ATPases BpOF4_02525 SM01231 BpOF4_02525 BpOF4_02530 SM00052 Putative diguanylate phosphodiesterase BpOF4_02530 SM00267 diguanylate cyclase BpOF4_02545 SM00382 ATPases associated with a variety of cellular activities BpOF4_02600 SM00091 PAS domain BpOF4_02600 SM00382 ATPases associated with a variety of cellular activities BpOF4_02620 SM00382 ATPases associated with a variety of cellular activities BpOF4_02640 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_02640 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_02660 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_02660 SM00924 MgtE intracellular N domain BpOF4_02665 SM00382 ATPases associated with a variety of cellular activities BpOF4_02675 SM00226 Low molecular weight phosphatase family BpOF4_02685 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_02690 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_02710 SM00849 Metallo-beta-lactamase superfamily BpOF4_02740 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_02780 SM00852 Probable molybdopterin binding domain BpOF4_02785 SM00852 Probable molybdopterin binding domain BpOF4_02870 SM00382 ATPases associated with a variety of cellular activities BpOF4_02915 SM00257 Lysin motif BpOF4_02925 SM01004 Delta-aminolevulinic acid dehydratase BpOF4_02960 SM00382 ATPases associated with a variety of cellular activities BpOF4_02960 SM00464 Found in ATP-dependent protease La (LON) BpOF4_02965 SM00382 ATPases associated with a variety of cellular activities BpOF4_02975 SM00382 ATPases associated with a variety of cellular activities BpOF4_02975 SM00994 ClpX C4-type zinc finger BpOF4_02975 SM01086 C-terminal, D2-small domain, of ClpB protein BpOF4_02990 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_03005 SM01329 BpOF4_03005 BpOF4_03010 SM00917 LeuA allosteric (dimerisation) domain BpOF4_03070 SM00909 Sporulation and spore germination BpOF4_03080 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_03095 SM01061 CAT RNA binding domain BpOF4_03100 SM00421 helix_turn_helix, Lux Regulon BpOF4_03140 SM00465 GIY-YIG type nucleases (URI domain) BpOF4_03150 SM00893 Electron transfer flavoprotein domain BpOF4_03155 SM00893 Electron transfer flavoprotein domain BpOF4_03185 SM00463 Small MutS-related domain BpOF4_03185 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BpOF4_03185 SM00534 ATPase domain of DNA mismatch repair MUTS family BpOF4_03190 SM00481 DNA polymerase alpha chain like domain BpOF4_03190 SM00483 DNA polymerase X family BpOF4_03210 SM00873 B3/4 domain BpOF4_03210 SM00874 tRNA synthetase B5 domain BpOF4_03210 SM00896 Ferredoxin-fold anticodon binding domain BpOF4_03220 SM00967 RNA 2'-O ribose methyltransferase substrate binding BpOF4_03270 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BpOF4_03280 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_03285 SM00382 ATPases associated with a variety of cellular activities BpOF4_03310 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BpOF4_03325 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain BpOF4_03325 SM01232 BpOF4_03325 BpOF4_03330 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BpOF4_03330 SM00474 3'-5' exonuclease BpOF4_03330 SM00475 5'-3' exonuclease BpOF4_03330 SM00482 DNA polymerase A domain BpOF4_03335 SM00244 prohibitin homologues BpOF4_03340 SM00244 prohibitin homologues BpOF4_03345 SM00091 PAS domain BpOF4_03345 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_03345 SM00387 Histidine kinase-like ATPases BpOF4_03345 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_03350 SM00448 cheY-homologous receiver domain BpOF4_03350 SM00862 Transcriptional regulatory protein, C terminal BpOF4_03360 SM01329 BpOF4_03360 BpOF4_03400 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_03400 SM00895 BpOF4_03400 BpOF4_03405 SM00919 Malic enzyme, NAD binding domain BpOF4_03405 SM01274 BpOF4_03405 BpOF4_03410 SM00481 DNA polymerase alpha chain like domain BpOF4_03440 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_03450 SM00849 Metallo-beta-lactamase superfamily BpOF4_03555 SM00981 BpOF4_03555 BpOF4_03585 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BpOF4_03590 SM00267 diguanylate cyclase BpOF4_03595 SM00363 S4 RNA-binding domain BpOF4_03595 SM01390 BpOF4_03595 BpOF4_03620 SM00255 Toll - interleukin 1 - resistance BpOF4_03660 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_03715 SM00855 Phosphoglycerate mutase family BpOF4_03725 SM00487 DEAD-like helicases superfamily BpOF4_03780 SM00363 S4 RNA-binding domain BpOF4_03800 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_03825 SM00354 helix_turn _helix lactose operon repressor BpOF4_03830 SM00830 Chorismate mutase type II BpOF4_03880 SM00843 BpOF4_03880 BpOF4_03920 SM00849 Metallo-beta-lactamase superfamily BpOF4_03955 SM00382 ATPases associated with a variety of cellular activities BpOF4_03960 SM00382 ATPases associated with a variety of cellular activities BpOF4_03975 SM00028 Tetratricopeptide repeats BpOF4_03975 SM01043 Bacterial transcriptional activator domain BpOF4_04040 SM00420 helix_turn_helix, Deoxyribose operon repressor BpOF4_04085 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_04095 SM00947 Carbonic anhydrase BpOF4_04120 SM00014 Acid phosphatase homologues BpOF4_04170 SM00382 ATPases associated with a variety of cellular activities BpOF4_04230 SM00642 Alpha-amylase domain BpOF4_04240 SM00382 ATPases associated with a variety of cellular activities BpOF4_04300 SM00421 helix_turn_helix, Lux Regulon BpOF4_04300 SM00448 cheY-homologous receiver domain BpOF4_04305 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BpOF4_04325 SM00382 ATPases associated with a variety of cellular activities BpOF4_04395 SM00354 helix_turn _helix lactose operon repressor BpOF4_04405 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_04420 SM00857 Resolvase, N terminal domain BpOF4_04485 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_04510 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_04605 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_04610 SM00487 DEAD-like helicases superfamily BpOF4_04610 SM00490 helicase superfamily c-terminal domain BpOF4_04640 SM00344 helix_turn_helix ASNC type BpOF4_04655 SM00642 Alpha-amylase domain BpOF4_04680 SM00411 bacterial (prokaryotic) histone like domain BpOF4_04785 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_04785 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_04830 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_04915 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_04915 SM00420 helix_turn_helix, Deoxyribose operon repressor BpOF4_04970 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_05010 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_05055 SM00382 ATPases associated with a variety of cellular activities BpOF4_05075 SM00382 ATPases associated with a variety of cellular activities BpOF4_05075 SM00930 BpOF4_05075 BpOF4_05155 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_05160 SM00382 ATPases associated with a variety of cellular activities BpOF4_05175 SM00267 diguanylate cyclase BpOF4_05250 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_05250 SM00357 Cold shock protein domain BpOF4_05250 SM00955 BpOF4_05250 BpOF4_05270 SM01192 BpOF4_05270 BpOF4_05270 SM01193 BpOF4_05270 BpOF4_05290 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BpOF4_05345 SM00028 Tetratricopeptide repeats BpOF4_05435 SM00382 ATPases associated with a variety of cellular activities BpOF4_05440 SM00487 DEAD-like helicases superfamily BpOF4_05440 SM00490 helicase superfamily c-terminal domain BpOF4_05455 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_05460 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_05460 SM00245 tail specific protease BpOF4_05470 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BpOF4_05490 SM00382 ATPases associated with a variety of cellular activities BpOF4_05505 SM00937 BpOF4_05505 BpOF4_05510 SM00957 SecA DEAD-like domain BpOF4_05510 SM00958 SecA preprotein cross-linking domain BpOF4_05515 SM00091 PAS domain BpOF4_05515 SM00387 Histidine kinase-like ATPases BpOF4_05520 SM00448 cheY-homologous receiver domain BpOF4_05540 SM00357 Cold shock protein domain BpOF4_05630 SM00421 helix_turn_helix, Lux Regulon BpOF4_05680 SM00487 DEAD-like helicases superfamily BpOF4_05680 SM00490 helicase superfamily c-terminal domain BpOF4_05695 SM00421 helix_turn_helix, Lux Regulon BpOF4_05695 SM00448 cheY-homologous receiver domain BpOF4_05700 SM00387 Histidine kinase-like ATPases BpOF4_05715 SM00344 helix_turn_helix ASNC type BpOF4_05735 SM00382 ATPases associated with a variety of cellular activities BpOF4_05740 SM00382 ATPases associated with a variety of cellular activities BpOF4_05760 SM00382 ATPases associated with a variety of cellular activities BpOF4_05765 SM00382 ATPases associated with a variety of cellular activities BpOF4_05800 SM00957 SecA DEAD-like domain BpOF4_05800 SM00958 SecA preprotein cross-linking domain BpOF4_05810 SM00287 Bacterial SH3 domain homologues BpOF4_05810 SM00646 BpOF4_05810 BpOF4_05815 SM00047 Lysozyme subfamily 2 BpOF4_05865 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_05865 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_05875 SM00382 ATPases associated with a variety of cellular activities BpOF4_05905 SM00631 BpOF4_05905 BpOF4_06000 SM00860 SMI1 / KNR4 family BpOF4_06105 SM00287 Bacterial SH3 domain homologues BpOF4_06105 SM00646 BpOF4_06105 BpOF4_06195 SM00448 cheY-homologous receiver domain BpOF4_06195 SM00862 Transcriptional regulatory protein, C terminal BpOF4_06200 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_06200 SM00387 Histidine kinase-like ATPases BpOF4_06200 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_06305 SM00382 ATPases associated with a variety of cellular activities BpOF4_06355 SM00354 helix_turn _helix lactose operon repressor BpOF4_06375 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_06395 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_06405 SM01321 BpOF4_06405 BpOF4_06455 SM01321 BpOF4_06455 BpOF4_06530 SM00984 UDP binding domain BpOF4_06560 SM00984 UDP binding domain BpOF4_06650 SM00854 Bacterial capsule synthesis protein PGA_cap BpOF4_06665 SM00642 Alpha-amylase domain BpOF4_06670 SM00100 Cyclic nucleotide-monophosphate binding domain BpOF4_06670 SM00419 helix_turn_helix, cAMP Regulatory protein BpOF4_06690 SM00829 Enoylreductase BpOF4_06780 SM00479 BpOF4_06780 BpOF4_06785 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_06850 SM00382 ATPases associated with a variety of cellular activities BpOF4_06925 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_06925 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_06930 SM00226 Low molecular weight phosphatase family BpOF4_06960 SM00937 BpOF4_06960 BpOF4_06970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_06970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_06970 SM01049 BpOF4_06970 BpOF4_06990 SM00357 Cold shock protein domain BpOF4_06990 SM00382 ATPases associated with a variety of cellular activities BpOF4_06990 SM00959 Rho termination factor, N-terminal domain BpOF4_07015 SM00448 cheY-homologous receiver domain BpOF4_07070 SM00155 Phospholipase D. Active site motifs. BpOF4_07110 SM00836 DALR anticodon binding domain BpOF4_07110 SM01016 Arginyl tRNA synthetase N terminal dom BpOF4_07150 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BpOF4_07155 SM00382 ATPases associated with a variety of cellular activities BpOF4_07185 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_07225 SM00052 Putative diguanylate phosphodiesterase BpOF4_07225 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_07225 SM00091 PAS domain BpOF4_07225 SM00267 diguanylate cyclase BpOF4_07230 SM00344 helix_turn_helix ASNC type BpOF4_07275 SM00422 helix_turn_helix, mercury resistance BpOF4_07280 SM00479 BpOF4_07280 BpOF4_07325 SM00986 Uracil DNA glycosylase superfamily BpOF4_07325 SM00987 UreE urease accessory protein, C-terminal domain BpOF4_07355 SM00640 Glycosyl hydrolases family 32 BpOF4_07380 SM01230 BpOF4_07380 BpOF4_07400 SM00382 ATPases associated with a variety of cellular activities BpOF4_07415 SM00487 DEAD-like helicases superfamily BpOF4_07415 SM00490 helicase superfamily c-terminal domain BpOF4_07420 SM00642 Alpha-amylase domain BpOF4_07460 SM00903 Flavin reductase like domain BpOF4_07495 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_07495 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_07505 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BpOF4_07505 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BpOF4_07505 SM00493 BpOF4_07505 BpOF4_07535 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BpOF4_07555 SM00052 Putative diguanylate phosphodiesterase BpOF4_07555 SM00267 diguanylate cyclase BpOF4_07610 SM01060 BpOF4_07610 BpOF4_07665 SM00382 ATPases associated with a variety of cellular activities BpOF4_07695 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_07700 SM00091 PAS domain BpOF4_07700 SM00387 Histidine kinase-like ATPases BpOF4_07700 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_07805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. BpOF4_07810 SM00849 Metallo-beta-lactamase superfamily BpOF4_07825 SM00091 PAS domain BpOF4_07825 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_07825 SM00387 Histidine kinase-like ATPases BpOF4_07825 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_07830 SM00448 cheY-homologous receiver domain BpOF4_07830 SM00862 Transcriptional regulatory protein, C terminal BpOF4_07835 SM00788 Adenylosuccinate synthetase BpOF4_07850 SM00267 diguanylate cyclase BpOF4_07905 SM00470 ParB-like nuclease domain BpOF4_07915 SM00470 ParB-like nuclease domain BpOF4_07925 SM01228 BpOF4_07925 BpOF4_07935 SM00393 Putative single-stranded nucleic acids-binding domain BpOF4_07935 SM01245 BpOF4_07935 BpOF4_07955 SM00382 ATPases associated with a variety of cellular activities BpOF4_07955 SM00760 Bacterial dnaA protein helix-turn-helix domain BpOF4_07960 SM00480 DNA polymerase III beta subunit BpOF4_07980 SM00387 Histidine kinase-like ATPases BpOF4_07980 SM00433 TopoisomeraseII BpOF4_07985 SM00434 DNA Topoisomerase IV BpOF4_07990 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_08000 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_08000 SM01240 BpOF4_08000 BpOF4_08005 SM00936 Penicillin-binding protein 5, C-terminal domain BpOF4_08025 SM00382 ATPases associated with a variety of cellular activities BpOF4_08030 SM00382 ATPases associated with a variety of cellular activities BpOF4_08055 SM00382 ATPases associated with a variety of cellular activities BpOF4_08065 SM00493 BpOF4_08065 BpOF4_08130 SM00465 GIY-YIG type nucleases (URI domain) BpOF4_08140 SM00966 SpoVT / AbrB like domain BpOF4_08145 SM00933 BpOF4_08145 BpOF4_08165 SM01208 BpOF4_08165 BpOF4_08170 SM00493 BpOF4_08170 BpOF4_08175 SM00650 Ribosomal RNA adenine dimethylases BpOF4_08225 SM01400 BpOF4_08225 BpOF4_08245 SM00487 DEAD-like helicases superfamily BpOF4_08245 SM00490 helicase superfamily c-terminal domain BpOF4_08245 SM00982 BpOF4_08245 BpOF4_08245 SM01058 CarD-like/TRCF domain BpOF4_08250 SM00966 SpoVT / AbrB like domain BpOF4_08265 SM00363 S4 RNA-binding domain BpOF4_08285 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_08290 SM00331 Sigma factor PP2C-like phosphatases BpOF4_08290 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BpOF4_08300 SM00220 Serine/Threonine protein kinases, catalytic domain BpOF4_08315 SM00977 TilS substrate C-terminal domain BpOF4_08325 SM00382 ATPases associated with a variety of cellular activities BpOF4_08365 SM00905 Dihydroneopterin aldolase BpOF4_08375 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_08405 SM00382 ATPases associated with a variety of cellular activities BpOF4_08405 SM01086 C-terminal, D2-small domain, of ClpB protein BpOF4_08410 SM00382 ATPases associated with a variety of cellular activities BpOF4_08420 SM00670 Large family of predicted nucleotide-binding domains BpOF4_08445 SM00840 BpOF4_08445 BpOF4_08450 SM00535 Ribonuclease III family BpOF4_08455 SM00967 RNA 2'-O ribose methyltransferase substrate binding BpOF4_08480 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. BpOF4_08480 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BpOF4_08485 SM00649 Ribosomal protein L11/L12 BpOF4_08515 SM00663 RNA polymerase I subunit A N-terminus BpOF4_08535 SM00838 Elongation factor G C-terminus BpOF4_08535 SM00889 Elongation factor G, domain IV BpOF4_08545 SM01403 BpOF4_08545 BpOF4_08565 SM01382 BpOF4_08565 BpOF4_08565 SM01383 BpOF4_08565 BpOF4_08580 SM00322 K homology RNA-binding domain BpOF4_08600 SM01374 BpOF4_08600 BpOF4_08605 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. BpOF4_08670 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_08690 SM00662 RNA polymerases D BpOF4_08700 SM00382 ATPases associated with a variety of cellular activities BpOF4_08705 SM00382 ATPases associated with a variety of cellular activities BpOF4_08760 SM00646 BpOF4_08760 BpOF4_08775 SM01251 BpOF4_08775 BpOF4_08840 SM00257 Lysin motif BpOF4_08845 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_08845 SM00267 diguanylate cyclase BpOF4_08915 SM00342 helix_turn_helix, arabinose operon control protein BpOF4_08980 SM00062 Bacterial periplasmic substrate-binding proteins BpOF4_08990 SM00382 ATPases associated with a variety of cellular activities BpOF4_08995 SM00382 ATPases associated with a variety of cellular activities BpOF4_08995 SM00930 BpOF4_08995 BpOF4_09060 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_09060 SM00091 PAS domain BpOF4_09060 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_09065 SM00387 Histidine kinase-like ATPases BpOF4_09080 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_09115 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_09115 SM00924 MgtE intracellular N domain BpOF4_09120 SM00382 ATPases associated with a variety of cellular activities BpOF4_09185 SM00387 Histidine kinase-like ATPases BpOF4_09190 SM00331 Sigma factor PP2C-like phosphatases BpOF4_09190 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain BpOF4_09210 SM00331 Sigma factor PP2C-like phosphatases BpOF4_09215 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_09215 SM00732 Likely ribonuclease with RNase H fold. BpOF4_09225 SM00731 SprT homologues. BpOF4_09280 SM00382 ATPases associated with a variety of cellular activities BpOF4_09285 SM00881 CoA binding domain BpOF4_09355 SM00883 Chaperonin 10 Kd subunit BpOF4_09365 SM00450 Rhodanese Homology Domain BpOF4_09400 SM00448 cheY-homologous receiver domain BpOF4_09405 SM00387 Histidine kinase-like ATPases BpOF4_09425 SM00631 BpOF4_09425 BpOF4_09515 SM00450 Rhodanese Homology Domain BpOF4_09520 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_09535 SM00954 Region found in RelA / SpoT proteins BpOF4_09555 SM00382 ATPases associated with a variety of cellular activities BpOF4_09580 SM00382 ATPases associated with a variety of cellular activities BpOF4_09590 SM00460 Transglutaminase/protease-like homologues BpOF4_09645 SM01001 AIR carboxylase BpOF4_09655 SM00998 Adenylosuccinate lyase C-terminus BpOF4_09670 SM01211 BpOF4_09670 BpOF4_09695 SM00798 AICARFT/IMPCHase bienzyme BpOF4_09695 SM00851 MGS-like domain BpOF4_09700 SM01209 BpOF4_09700 BpOF4_09700 SM01210 BpOF4_09700 BpOF4_09735 SM00756 BpOF4_09735 BpOF4_09750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BpOF4_09770 SM01005 Alanine racemase, C-terminal domain BpOF4_09775 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BpOF4_09775 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BpOF4_09790 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_09860 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BpOF4_09860 SM00292 breast cancer carboxy-terminal domain BpOF4_09860 SM00532 Ligase N family BpOF4_09875 SM00382 ATPases associated with a variety of cellular activities BpOF4_09905 SM00845 GatB domain BpOF4_09910 SM00046 Diacylglycerol kinase catalytic domain (presumed) BpOF4_09975 SM00382 ATPases associated with a variety of cellular activities BpOF4_09980 SM00387 Histidine kinase-like ATPases BpOF4_09985 SM00448 cheY-homologous receiver domain BpOF4_09985 SM00862 Transcriptional regulatory protein, C terminal BpOF4_10030 SM00387 Histidine kinase-like ATPases BpOF4_10035 SM00421 helix_turn_helix, Lux Regulon BpOF4_10035 SM00448 cheY-homologous receiver domain BpOF4_10065 SM00448 cheY-homologous receiver domain BpOF4_10065 SM00862 Transcriptional regulatory protein, C terminal BpOF4_10070 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_10070 SM00387 Histidine kinase-like ATPases BpOF4_10070 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_10160 SM00796 Allophanate hydrolase subunit 1 BpOF4_10165 SM00797 Allophanate hydrolase subunit 2 BpOF4_10170 SM00346 helix_turn_helix isocitrate lyase regulation BpOF4_10215 SM00382 ATPases associated with a variety of cellular activities BpOF4_10230 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_10280 SM00257 Lysin motif BpOF4_10280 SM00631 BpOF4_10280 BpOF4_10285 SM00382 ATPases associated with a variety of cellular activities BpOF4_10290 SM00382 ATPases associated with a variety of cellular activities BpOF4_10295 SM00387 Histidine kinase-like ATPases BpOF4_10295 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_10310 SM00363 S4 RNA-binding domain BpOF4_10350 SM00642 Alpha-amylase domain BpOF4_10355 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_10355 SM00866 BpOF4_10355 BpOF4_10370 SM00382 ATPases associated with a variety of cellular activities BpOF4_10375 SM00091 PAS domain BpOF4_10375 SM00267 diguanylate cyclase BpOF4_10380 SM00420 helix_turn_helix, Deoxyribose operon repressor BpOF4_10380 SM01134 BpOF4_10380 BpOF4_10405 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BpOF4_10425 SM00220 Serine/Threonine protein kinases, catalytic domain BpOF4_10455 SM01061 CAT RNA binding domain BpOF4_10530 SM01060 BpOF4_10530 BpOF4_10560 SM00344 helix_turn_helix ASNC type BpOF4_10580 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_10580 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_10610 SM00849 Metallo-beta-lactamase superfamily BpOF4_10665 SM00855 Phosphoglycerate mutase family BpOF4_10675 SM00357 Cold shock protein domain BpOF4_10745 SM00382 ATPases associated with a variety of cellular activities BpOF4_10755 SM00062 Bacterial periplasmic substrate-binding proteins BpOF4_10755 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BpOF4_10835 SM00478 endonuclease III BpOF4_10835 SM00525 BpOF4_10835 BpOF4_10850 SM00829 Enoylreductase BpOF4_10880 SM00382 ATPases associated with a variety of cellular activities BpOF4_10970 SM00450 Rhodanese Homology Domain BpOF4_10975 SM00091 PAS domain BpOF4_10975 SM00387 Histidine kinase-like ATPases BpOF4_10975 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_10980 SM00854 Bacterial capsule synthesis protein PGA_cap BpOF4_11000 SM00873 B3/4 domain BpOF4_11045 SM00763 PrkA AAA domain BpOF4_11070 SM00382 ATPases associated with a variety of cellular activities BpOF4_11105 SM01329 BpOF4_11105 BpOF4_11145 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_11225 SM00382 ATPases associated with a variety of cellular activities BpOF4_11230 SM00382 ATPases associated with a variety of cellular activities BpOF4_11235 SM00448 cheY-homologous receiver domain BpOF4_11235 SM00862 Transcriptional regulatory protein, C terminal BpOF4_11240 SM00387 Histidine kinase-like ATPases BpOF4_11240 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_11260 SM00052 Putative diguanylate phosphodiesterase BpOF4_11260 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_11260 SM00091 PAS domain BpOF4_11260 SM00267 diguanylate cyclase BpOF4_11290 SM00878 Biotin carboxylase C-terminal domain BpOF4_11330 SM00382 ATPases associated with a variety of cellular activities BpOF4_11385 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_11390 SM00382 ATPases associated with a variety of cellular activities BpOF4_11395 SM00382 ATPases associated with a variety of cellular activities BpOF4_11420 SM00448 cheY-homologous receiver domain BpOF4_11420 SM00862 Transcriptional regulatory protein, C terminal BpOF4_11425 SM00387 Histidine kinase-like ATPases BpOF4_11425 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_11435 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_11475 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_11520 SM00382 ATPases associated with a variety of cellular activities BpOF4_11560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_11560 SM00387 Histidine kinase-like ATPases BpOF4_11565 SM00421 helix_turn_helix, Lux Regulon BpOF4_11565 SM00448 cheY-homologous receiver domain BpOF4_11605 SM00062 Bacterial periplasmic substrate-binding proteins BpOF4_11615 SM00382 ATPases associated with a variety of cellular activities BpOF4_11620 SM01317 BpOF4_11620 BpOF4_11645 SM00257 Lysin motif BpOF4_11660 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BpOF4_11665 SM00382 ATPases associated with a variety of cellular activities BpOF4_11685 SM01323 BpOF4_11685 BpOF4_11760 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_11760 SM00954 Region found in RelA / SpoT proteins BpOF4_11805 SM00387 Histidine kinase-like ATPases BpOF4_11805 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_11810 SM00382 ATPases associated with a variety of cellular activities BpOF4_11835 SM00028 Tetratricopeptide repeats BpOF4_11840 SM00382 ATPases associated with a variety of cellular activities BpOF4_11865 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BpOF4_11875 SM00732 Likely ribonuclease with RNase H fold. BpOF4_11960 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_11960 SM00895 BpOF4_11960 BpOF4_11965 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. BpOF4_12005 SM00487 DEAD-like helicases superfamily BpOF4_12005 SM00490 helicase superfamily c-terminal domain BpOF4_12035 SM00382 ATPases associated with a variety of cellular activities BpOF4_12035 SM01086 C-terminal, D2-small domain, of ClpB protein BpOF4_12050 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_12070 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BpOF4_12095 SM00317 SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain BpOF4_12100 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_12120 SM00382 ATPases associated with a variety of cellular activities BpOF4_12175 SM00382 ATPases associated with a variety of cellular activities BpOF4_12240 SM00382 ATPases associated with a variety of cellular activities BpOF4_12275 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BpOF4_12320 SM00448 cheY-homologous receiver domain BpOF4_12320 SM00862 Transcriptional regulatory protein, C terminal BpOF4_12325 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_12325 SM00387 Histidine kinase-like ATPases BpOF4_12325 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_12365 SM00450 Rhodanese Homology Domain BpOF4_12365 SM00849 Metallo-beta-lactamase superfamily BpOF4_12415 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BpOF4_12465 SM01240 BpOF4_12465 BpOF4_12470 SM00422 helix_turn_helix, mercury resistance BpOF4_12485 SM00448 cheY-homologous receiver domain BpOF4_12490 SM00387 Histidine kinase-like ATPases BpOF4_12515 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain BpOF4_12570 SM00346 helix_turn_helix isocitrate lyase regulation BpOF4_12575 SM00346 helix_turn_helix isocitrate lyase regulation BpOF4_12590 SM00346 helix_turn_helix isocitrate lyase regulation BpOF4_12605 SM00859 Semialdehyde dehydrogenase, NAD binding domain BpOF4_12665 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_12665 SM00895 BpOF4_12665 BpOF4_12725 SM00267 diguanylate cyclase BpOF4_12800 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_12800 SM00866 BpOF4_12800 BpOF4_12835 SM00926 Molybdopterin oxidoreductase Fe4S4 domain BpOF4_12905 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_12930 SM00014 Acid phosphatase homologues BpOF4_12950 SM00862 Transcriptional regulatory protein, C terminal BpOF4_12970 SM00387 Histidine kinase-like ATPases BpOF4_12970 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_12975 SM00448 cheY-homologous receiver domain BpOF4_12975 SM00862 Transcriptional regulatory protein, C terminal BpOF4_13010 SM00052 Putative diguanylate phosphodiesterase BpOF4_13010 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_13010 SM00267 diguanylate cyclase BpOF4_13025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_13025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_13030 SM00091 PAS domain BpOF4_13030 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_13040 SM00387 Histidine kinase-like ATPases BpOF4_13045 SM00448 cheY-homologous receiver domain BpOF4_13045 SM00850 LytTr DNA-binding domain BpOF4_13055 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_13065 SM00331 Sigma factor PP2C-like phosphatases BpOF4_13070 SM01245 BpOF4_13070 BpOF4_13085 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. BpOF4_13085 SM00387 Histidine kinase-like ATPases BpOF4_13085 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_13090 SM00014 Acid phosphatase homologues BpOF4_13110 SM01131 BpOF4_13110 BpOF4_13130 SM00098 Alkaline phosphatase homologues BpOF4_13150 SM00382 ATPases associated with a variety of cellular activities BpOF4_13165 SM00411 bacterial (prokaryotic) histone like domain BpOF4_13240 SM01103 BpOF4_13240 BpOF4_13250 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_13260 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_13280 SM00278 Helix-hairpin-helix DNA-binding motif class 1 BpOF4_13290 SM00849 Metallo-beta-lactamase superfamily BpOF4_13330 SM00838 Elongation factor G C-terminus BpOF4_13335 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_13360 SM00271 DnaJ molecular chaperone homology domain BpOF4_13375 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_13380 SM01133 BpOF4_13380 BpOF4_13425 SM00822 BpOF4_13425 BpOF4_13440 SM00450 Rhodanese Homology Domain BpOF4_13440 SM00849 Metallo-beta-lactamase superfamily BpOF4_13455 SM00450 Rhodanese Homology Domain BpOF4_13460 SM00849 Metallo-beta-lactamase superfamily BpOF4_13475 SM00947 Carbonic anhydrase BpOF4_13485 SM00450 Rhodanese Homology Domain BpOF4_13540 SM00822 BpOF4_13540 BpOF4_13590 SM00829 Enoylreductase BpOF4_13605 SM00382 ATPases associated with a variety of cellular activities BpOF4_13610 SM00382 ATPases associated with a variety of cellular activities BpOF4_13660 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_13710 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_13725 SM00400 zinc finger BpOF4_13725 SM00493 BpOF4_13725 BpOF4_13760 SM01058 CarD-like/TRCF domain BpOF4_13770 SM00487 DEAD-like helicases superfamily BpOF4_13770 SM00490 helicase superfamily c-terminal domain BpOF4_13775 SM00518 AP endonuclease family 2 BpOF4_13785 SM00387 Histidine kinase-like ATPases BpOF4_13785 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_13790 SM00382 ATPases associated with a variety of cellular activities BpOF4_13815 SM00382 ATPases associated with a variety of cellular activities BpOF4_13980 SM00028 Tetratricopeptide repeats BpOF4_14050 SM00382 ATPases associated with a variety of cellular activities BpOF4_14105 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_14110 SM00382 ATPases associated with a variety of cellular activities BpOF4_14190 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_14190 SM00387 Histidine kinase-like ATPases BpOF4_14190 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_14195 SM00448 cheY-homologous receiver domain BpOF4_14195 SM00862 Transcriptional regulatory protein, C terminal BpOF4_14235 SM00091 PAS domain BpOF4_14235 SM00387 Histidine kinase-like ATPases BpOF4_14235 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_14260 SM00062 Bacterial periplasmic substrate-binding proteins BpOF4_14260 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. BpOF4_14270 SM00382 ATPases associated with a variety of cellular activities BpOF4_14410 SM00422 helix_turn_helix, mercury resistance BpOF4_14465 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase BpOF4_14515 SM00267 diguanylate cyclase BpOF4_14515 SM00448 cheY-homologous receiver domain BpOF4_14530 SM00448 cheY-homologous receiver domain BpOF4_14535 SM00387 Histidine kinase-like ATPases BpOF4_14535 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_14535 SM00448 cheY-homologous receiver domain BpOF4_14545 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_14575 SM00563 Phosphate acyltransferases BpOF4_14620 SM01061 CAT RNA binding domain BpOF4_14685 SM01007 Class II Aldolase and Adducin N-terminal domain BpOF4_14775 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain BpOF4_14820 SM00936 Penicillin-binding protein 5, C-terminal domain BpOF4_14830 SM00387 Histidine kinase-like ATPases BpOF4_14900 SM00382 ATPases associated with a variety of cellular activities BpOF4_14905 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_15040 SM00363 S4 RNA-binding domain BpOF4_15060 SM00448 cheY-homologous receiver domain BpOF4_15060 SM00862 Transcriptional regulatory protein, C terminal BpOF4_15065 SM00091 PAS domain BpOF4_15065 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_15065 SM00387 Histidine kinase-like ATPases BpOF4_15065 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_15070 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_15100 SM00382 ATPases associated with a variety of cellular activities BpOF4_15165 SM00257 Lysin motif BpOF4_15185 SM00257 Lysin motif BpOF4_15185 SM00631 BpOF4_15185 BpOF4_15200 SM00487 DEAD-like helicases superfamily BpOF4_15200 SM00490 helicase superfamily c-terminal domain BpOF4_15255 SM00422 helix_turn_helix, mercury resistance BpOF4_15270 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BpOF4_15280 SM00870 BpOF4_15280 BpOF4_15305 SM01018 B12 binding domain BpOF4_15330 SM00563 Phosphate acyltransferases BpOF4_15335 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_15340 SM01240 BpOF4_15340 BpOF4_15360 SM01207 BpOF4_15360 BpOF4_15425 SM00562 BpOF4_15425 BpOF4_15430 SM00138 Methyltransferase, chemotaxis proteins BpOF4_15505 SM00028 Tetratricopeptide repeats BpOF4_15510 SM00914 BpOF4_15510 BpOF4_15570 SM00851 MGS-like domain BpOF4_15615 SM00028 Tetratricopeptide repeats BpOF4_15620 SM00479 BpOF4_15620 BpOF4_15620 SM00487 DEAD-like helicases superfamily BpOF4_15620 SM00491 BpOF4_15620 BpOF4_15665 SM00478 endonuclease III BpOF4_15665 SM00525 BpOF4_15665 BpOF4_15685 SM00060 Fibronectin type 3 domain BpOF4_15715 SM00450 Rhodanese Homology Domain BpOF4_15735 SM00260 Two component signalling adaptor domain BpOF4_15735 SM00448 cheY-homologous receiver domain BpOF4_15775 SM00567 E-Z type HEAT repeats BpOF4_15775 SM00932 Scaffold protein Nfu/NifU N terminal BpOF4_15800 SM00849 Metallo-beta-lactamase superfamily BpOF4_15850 SM01298 BpOF4_15850 BpOF4_15885 SM01130 BpOF4_15885 BpOF4_15925 SM00357 Cold shock protein domain BpOF4_15945 SM00357 Cold shock protein domain BpOF4_15950 SM00422 helix_turn_helix, mercury resistance BpOF4_15980 SM00938 Nitrogen regulatory protein P-II BpOF4_15995 SM00487 DEAD-like helicases superfamily BpOF4_15995 SM00490 helicase superfamily c-terminal domain BpOF4_16030 SM00981 BpOF4_16030 BpOF4_16090 SM00091 PAS domain BpOF4_16090 SM00382 ATPases associated with a variety of cellular activities BpOF4_16095 SM00882 Coenzyme A transferase BpOF4_16105 SM00822 BpOF4_16105 BpOF4_16115 SM00382 ATPases associated with a variety of cellular activities BpOF4_16130 SM00881 CoA binding domain BpOF4_16140 SM00387 Histidine kinase-like ATPases BpOF4_16140 SM00433 TopoisomeraseII BpOF4_16145 SM00434 DNA Topoisomerase IV BpOF4_16185 SM00849 Metallo-beta-lactamase superfamily BpOF4_16205 SM00855 Phosphoglycerate mutase family BpOF4_16235 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) BpOF4_16235 SM00091 PAS domain BpOF4_16235 SM00382 ATPases associated with a variety of cellular activities BpOF4_16250 SM01266 BpOF4_16250 BpOF4_16295 SM01006 Siderophore biosynthesis protein domain BpOF4_16520 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_16570 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_16575 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_16580 SM00382 ATPases associated with a variety of cellular activities BpOF4_16685 SM00342 helix_turn_helix, arabinose operon control protein BpOF4_16730 SM00554 Four repeated domains in the Fasciclin I family of proteins, present in many other contexts. BpOF4_16755 SM00849 Metallo-beta-lactamase superfamily BpOF4_16765 SM00849 Metallo-beta-lactamase superfamily BpOF4_16840 SM01091 Transporter associated domain BpOF4_16855 SM00382 ATPases associated with a variety of cellular activities BpOF4_16865 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_16865 SM01091 Transporter associated domain BpOF4_16885 SM00382 ATPases associated with a variety of cellular activities BpOF4_16890 SM00382 ATPases associated with a variety of cellular activities BpOF4_16915 SM00833 Cobalamin synthesis protein cobW C-terminal domain BpOF4_16940 SM00422 helix_turn_helix, mercury resistance BpOF4_16950 SM00465 GIY-YIG type nucleases (URI domain) BpOF4_16955 SM00357 Cold shock protein domain BpOF4_16975 SM00422 helix_turn_helix, mercury resistance BpOF4_17010 SM00860 SMI1 / KNR4 family BpOF4_17050 SM01058 CarD-like/TRCF domain BpOF4_17115 SM00490 helicase superfamily c-terminal domain BpOF4_17135 SM00487 DEAD-like helicases superfamily BpOF4_17170 SM00974 BpOF4_17170 BpOF4_17180 SM00487 DEAD-like helicases superfamily BpOF4_17180 SM00490 helicase superfamily c-terminal domain BpOF4_17200 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_17210 SM00862 Transcriptional regulatory protein, C terminal BpOF4_17235 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_17265 SM00860 SMI1 / KNR4 family BpOF4_17275 SM00860 SMI1 / KNR4 family BpOF4_17285 SM00860 SMI1 / KNR4 family BpOF4_17325 SM00091 PAS domain BpOF4_17420 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_17470 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_17475 SM01057 Eukaryotic-type carbonic anhydrase BpOF4_17525 SM00382 ATPases associated with a variety of cellular activities BpOF4_17540 SM00342 helix_turn_helix, arabinose operon control protein BpOF4_17540 SM00871 Bacterial transcription activator, effector binding domain BpOF4_17585 SM00382 ATPases associated with a variety of cellular activities BpOF4_17605 SM00829 Enoylreductase BpOF4_17625 SM01022 BpOF4_17625 BpOF4_17720 SM00344 helix_turn_helix ASNC type BpOF4_17775 SM00327 von Willebrand factor (vWF) type A domain BpOF4_17790 SM01091 Transporter associated domain BpOF4_17830 SM00382 ATPases associated with a variety of cellular activities BpOF4_17835 SM00421 helix_turn_helix, Lux Regulon BpOF4_17835 SM00448 cheY-homologous receiver domain BpOF4_17935 SM00646 BpOF4_17935 BpOF4_17985 SM00354 helix_turn _helix lactose operon repressor BpOF4_18060 SM00382 ATPases associated with a variety of cellular activities BpOF4_18080 SM00387 Histidine kinase-like ATPases BpOF4_18080 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_18085 SM00387 Histidine kinase-like ATPases BpOF4_18085 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_18115 SM00919 Malic enzyme, NAD binding domain BpOF4_18115 SM01274 BpOF4_18115 BpOF4_18120 SM00448 cheY-homologous receiver domain BpOF4_18125 SM00091 PAS domain BpOF4_18125 SM00387 Histidine kinase-like ATPases BpOF4_18280 SM00382 ATPases associated with a variety of cellular activities BpOF4_18355 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_18355 SM00866 BpOF4_18355 BpOF4_18425 SM00257 Lysin motif BpOF4_18425 SM00636 BpOF4_18425 BpOF4_18440 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen BpOF4_18450 SM00382 ATPases associated with a variety of cellular activities BpOF4_18455 SM00382 ATPases associated with a variety of cellular activities BpOF4_18460 SM00487 DEAD-like helicases superfamily BpOF4_18460 SM00490 helicase superfamily c-terminal domain BpOF4_18480 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_18480 SM00387 Histidine kinase-like ATPases BpOF4_18480 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_18485 SM00448 cheY-homologous receiver domain BpOF4_18485 SM00862 Transcriptional regulatory protein, C terminal BpOF4_18505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_18510 SM00822 BpOF4_18510 BpOF4_18535 SM00257 Lysin motif BpOF4_18595 SM00882 Coenzyme A transferase BpOF4_18600 SM00882 Coenzyme A transferase BpOF4_18625 SM00091 PAS domain BpOF4_18625 SM00382 ATPases associated with a variety of cellular activities BpOF4_18630 SM00631 BpOF4_18630 BpOF4_18645 SM00491 BpOF4_18645 BpOF4_18650 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain BpOF4_18700 SM00046 Diacylglycerol kinase catalytic domain (presumed) BpOF4_18715 SM00829 Enoylreductase BpOF4_18735 SM00704 CDGSH-type zinc finger. Function unknown. BpOF4_18810 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs BpOF4_18810 SM00475 5'-3' exonuclease BpOF4_18825 SM00493 BpOF4_18825 BpOF4_18875 SM00341 Helicase and RNase D C-terminal BpOF4_18875 SM00487 DEAD-like helicases superfamily BpOF4_18875 SM00490 helicase superfamily c-terminal domain BpOF4_18875 SM00956 BpOF4_18875 BpOF4_18885 SM00382 ATPases associated with a variety of cellular activities BpOF4_18925 SM00861 Transketolase, pyrimidine binding domain BpOF4_19090 SM00260 Two component signalling adaptor domain BpOF4_19090 SM00448 cheY-homologous receiver domain BpOF4_19155 SM00052 Putative diguanylate phosphodiesterase BpOF4_19165 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_19165 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_19180 SM00481 DNA polymerase alpha chain like domain BpOF4_19215 SM00382 ATPases associated with a variety of cellular activities BpOF4_19275 SM00347 helix_turn_helix multiple antibiotic resistance protein BpOF4_19320 SM00382 ATPases associated with a variety of cellular activities BpOF4_19385 SM01002 Alanine dehydrogenase/PNT, C-terminal domain BpOF4_19385 SM01003 Alanine dehydrogenase/PNT, N-terminal domain BpOF4_19405 SM00382 ATPases associated with a variety of cellular activities BpOF4_19410 SM00382 ATPases associated with a variety of cellular activities BpOF4_19425 SM00861 Transketolase, pyrimidine binding domain BpOF4_19435 SM00857 Resolvase, N terminal domain BpOF4_19465 SM01230 BpOF4_19465 BpOF4_19470 SM00422 helix_turn_helix, mercury resistance BpOF4_19485 SM00382 ATPases associated with a variety of cellular activities BpOF4_19510 SM00853 MutL C terminal dimerisation domain BpOF4_19510 SM01340 BpOF4_19510 BpOF4_19515 SM00533 DNA-binding domain of DNA mismatch repair MUTS family BpOF4_19515 SM00534 ATPase domain of DNA mismatch repair MUTS family BpOF4_19530 SM00729 Elongator protein 3, MiaB family, Radical SAM BpOF4_19555 SM00322 K homology RNA-binding domain BpOF4_19555 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. BpOF4_19580 SM00382 ATPases associated with a variety of cellular activities BpOF4_19585 SM00487 DEAD-like helicases superfamily BpOF4_19585 SM00490 helicase superfamily c-terminal domain BpOF4_19590 SM00852 Probable molybdopterin binding domain BpOF4_19605 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_19635 SM00345 helix_turn_helix gluconate operon transcriptional repressor BpOF4_19635 SM00866 BpOF4_19635 BpOF4_19640 SM00382 ATPases associated with a variety of cellular activities BpOF4_19640 SM00843 BpOF4_19640 BpOF4_19655 SM00849 Metallo-beta-lactamase superfamily BpOF4_19660 SM01130 BpOF4_19660 BpOF4_19670 SM00859 Semialdehyde dehydrogenase, NAD binding domain BpOF4_19700 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_19700 SM00322 K homology RNA-binding domain BpOF4_19705 SM01387 BpOF4_19705 BpOF4_19710 SM00904 Riboflavin kinase BpOF4_19745 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_19745 SM00322 K homology RNA-binding domain BpOF4_19755 SM00479 BpOF4_19755 BpOF4_19755 SM00481 DNA polymerase alpha chain like domain BpOF4_19964 SM00966 SpoVT / AbrB like domain BpOF4_19984 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). BpOF4_19984 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_20034 SM01321 BpOF4_20034 BpOF4_20069 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_20094 SM00421 helix_turn_helix, Lux Regulon BpOF4_20104 SM00849 Metallo-beta-lactamase superfamily BpOF4_20149 SM00670 Large family of predicted nucleotide-binding domains BpOF4_20214 SM01117 BpOF4_20214 BpOF4_20219 SM00507 HNH nucleases BpOF4_20299 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_20299 SM00387 Histidine kinase-like ATPases BpOF4_20299 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_20304 SM00448 cheY-homologous receiver domain BpOF4_20304 SM00862 Transcriptional regulatory protein, C terminal BpOF4_20374 SM00936 Penicillin-binding protein 5, C-terminal domain BpOF4_20439 SM00450 Rhodanese Homology Domain BpOF4_20474 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain BpOF4_20474 SM00387 Histidine kinase-like ATPases BpOF4_20474 SM00388 His Kinase A (phosphoacceptor) domain BpOF4_20479 SM00448 cheY-homologous receiver domain BpOF4_20479 SM00862 Transcriptional regulatory protein, C terminal BpOF4_20514 SM00382 ATPases associated with a variety of cellular activities BpOF4_20524 SM00382 ATPases associated with a variety of cellular activities BpOF4_20584 SM00422 helix_turn_helix, mercury resistance BpOF4_20654 SM00490 helicase superfamily c-terminal domain BpOF4_20684 SM00507 HNH nucleases BpOF4_20714 SM00382 ATPases associated with a variety of cellular activities BpOF4_20764 SM00354 helix_turn _helix lactose operon repressor BpOF4_20849 SM00507 HNH nucleases BpOF4_20944 SM00316 Ribosomal protein S1-like RNA-binding domain BpOF4_20954 SM01321 BpOF4_20954 BpOF4_21089 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_21104 SM00858 BpOF4_21104 BpOF4_21159 SM00267 diguanylate cyclase BpOF4_21214 SM01208 BpOF4_21214 BpOF4_21269 SM00480 DNA polymerase III beta subunit BpOF4_21279 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain BpOF4_21279 SM00493 BpOF4_21279 BpOF4_21284 SM00437 Bacterial DNA topoisomerase I DNA-binding domain BpOF4_21294 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_21299 SM00318 Staphylococcal nuclease homologues BpOF4_21309 SM00052 Putative diguanylate phosphodiesterase BpOF4_21314 SM00052 Putative diguanylate phosphodiesterase BpOF4_21344 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_21494 SM00354 helix_turn _helix lactose operon repressor BpOF4_21624 SM00116 Domain in cystathionine beta-synthase and other proteins. BpOF4_21679 SM00354 helix_turn _helix lactose operon repressor BpOF4_21799 SM00530 Helix-turn-helix XRE-family like proteins BpOF4_21824 SM00857 Resolvase, N terminal domain BpOF4_21829 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor BpOF4_21914 SM00382 ATPases associated with a variety of cellular activities BpOF4_21939 SM00966 SpoVT / AbrB like domain BpOF4_21989 SM00857 Resolvase, N terminal domain BpOF4_22004 SM00382 ATPases associated with a variety of cellular activities