AKO66_00015 SM00530 Helix-turn-helix XRE-family like proteins AKO66_00025 SM00905 Dihydroneopterin aldolase AKO66_00070 SM00382 ATPases associated with a variety of cellular activities AKO66_00080 SM00977 TilS substrate C-terminal domain AKO66_00085 SM00220 Serine/Threonine protein kinases, catalytic domain AKO66_00095 SM00331 Sigma factor PP2C-like phosphatases AKO66_00095 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AKO66_00110 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_00130 SM00363 S4 RNA-binding domain AKO66_00145 SM00966 SpoVT / AbrB like domain AKO66_00150 SM00487 DEAD-like helicases superfamily AKO66_00150 SM00490 helicase superfamily c-terminal domain AKO66_00150 SM00982 AKO66_00150 AKO66_00150 SM01058 CarD-like/TRCF domain AKO66_00170 SM01400 AKO66_00170 AKO66_00215 SM00650 Ribosomal RNA adenine dimethylases AKO66_00220 SM00493 AKO66_00220 AKO66_00225 SM01208 AKO66_00225 AKO66_00240 SM00966 SpoVT / AbrB like domain AKO66_00250 SM00465 GIY-YIG type nucleases (URI domain) AKO66_00345 SM00493 AKO66_00345 AKO66_00355 SM00382 ATPases associated with a variety of cellular activities AKO66_00370 SM00257 Lysin motif AKO66_00370 SM00636 AKO66_00370 AKO66_00390 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_00410 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_00415 SM00936 Penicillin-binding protein 5, C-terminal domain AKO66_00420 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_00420 SM01240 AKO66_00420 AKO66_00455 SM00434 DNA Topoisomerase IV AKO66_00460 SM00387 Histidine kinase-like ATPases AKO66_00460 SM00433 TopoisomeraseII AKO66_00480 SM00480 DNA polymerase III beta subunit AKO66_00485 SM00382 ATPases associated with a variety of cellular activities AKO66_00485 SM00760 Bacterial dnaA protein helix-turn-helix domain AKO66_00505 SM00393 Putative single-stranded nucleic acids-binding domain AKO66_00505 SM01245 AKO66_00505 AKO66_00515 SM01228 AKO66_00515 AKO66_00525 SM00470 ParB-like nuclease domain AKO66_00540 SM00470 ParB-like nuclease domain AKO66_00590 SM00382 ATPases associated with a variety of cellular activities AKO66_00615 SM01060 AKO66_00615 AKO66_00635 SM01131 AKO66_00635 AKO66_00645 SM00267 diguanylate cyclase AKO66_00670 SM00342 helix_turn_helix, arabinose operon control protein AKO66_00695 SM00382 ATPases associated with a variety of cellular activities AKO66_00715 SM00788 Adenylosuccinate synthetase AKO66_00755 SM00448 cheY-homologous receiver domain AKO66_00755 SM00862 Transcriptional regulatory protein, C terminal AKO66_00760 SM00091 PAS domain AKO66_00760 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_00760 SM00387 Histidine kinase-like ATPases AKO66_00760 SM00388 His Kinase A (phosphoacceptor) domain AKO66_00775 SM00849 Metallo-beta-lactamase superfamily AKO66_00780 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_00790 SM00382 ATPases associated with a variety of cellular activities AKO66_00810 SM00382 ATPases associated with a variety of cellular activities AKO66_00840 SM00530 Helix-turn-helix XRE-family like proteins AKO66_00845 SM00849 Metallo-beta-lactamase superfamily AKO66_00855 SM00448 cheY-homologous receiver domain AKO66_00855 SM00862 Transcriptional regulatory protein, C terminal AKO66_00860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_00860 SM00387 Histidine kinase-like ATPases AKO66_00860 SM00388 His Kinase A (phosphoacceptor) domain AKO66_00915 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_00915 SM00866 AKO66_00915 AKO66_00970 SM00354 helix_turn _helix lactose operon repressor AKO66_00985 SM00530 Helix-turn-helix XRE-family like proteins AKO66_01025 SM01061 CAT RNA binding domain AKO66_01030 SM00028 Tetratricopeptide repeats AKO66_01040 SM00382 ATPases associated with a variety of cellular activities AKO66_01080 SM00382 ATPases associated with a variety of cellular activities AKO66_01125 SM00354 helix_turn _helix lactose operon repressor AKO66_01195 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AKO66_01195 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_01205 SM00422 helix_turn_helix, mercury resistance AKO66_01215 SM00421 helix_turn_helix, Lux Regulon AKO66_01250 SM01133 AKO66_01250 AKO66_01260 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AKO66_01265 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_01265 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AKO66_01320 SM00382 ATPases associated with a variety of cellular activities AKO66_01330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_01340 SM01061 CAT RNA binding domain AKO66_01435 SM00530 Helix-turn-helix XRE-family like proteins AKO66_01440 SM00530 Helix-turn-helix XRE-family like proteins AKO66_01445 SM00870 AKO66_01445 AKO66_01540 SM00725 NEAr Transporter domain AKO66_01545 SM00725 NEAr Transporter domain AKO66_01550 SM00725 NEAr Transporter domain AKO66_01565 SM00382 ATPases associated with a variety of cellular activities AKO66_01585 SM00382 ATPases associated with a variety of cellular activities AKO66_01600 SM00382 ATPases associated with a variety of cellular activities AKO66_01605 SM00382 ATPases associated with a variety of cellular activities AKO66_01610 SM00656 AKO66_01610 AKO66_01630 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKO66_01685 SM00710 Parallel beta-helix repeats AKO66_01695 SM00382 ATPases associated with a variety of cellular activities AKO66_01705 SM00954 Region found in RelA / SpoT proteins AKO66_01715 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_01715 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AKO66_01725 SM00382 ATPases associated with a variety of cellular activities AKO66_01740 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AKO66_01815 SM00342 helix_turn_helix, arabinose operon control protein AKO66_01895 SM01061 CAT RNA binding domain AKO66_01905 SM00640 Glycosyl hydrolases family 32 AKO66_01915 SM00530 Helix-turn-helix XRE-family like proteins AKO66_01935 SM00986 Uracil DNA glycosylase superfamily AKO66_01935 SM00987 UreE urease accessory protein, C-terminal domain AKO66_01960 SM00835 Cupin AKO66_01995 SM00858 AKO66_01995 AKO66_02065 SM00344 helix_turn_helix ASNC type AKO66_02150 SM00028 Tetratricopeptide repeats AKO66_02175 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_02230 SM00836 DALR anticodon binding domain AKO66_02230 SM01016 Arginyl tRNA synthetase N terminal dom AKO66_02240 SM00155 Phospholipase D. Active site motifs. AKO66_02245 SM00382 ATPases associated with a variety of cellular activities AKO66_02265 SM00155 Phospholipase D. Active site motifs. AKO66_02315 SM00382 ATPases associated with a variety of cellular activities AKO66_02340 SM00448 cheY-homologous receiver domain AKO66_02365 SM00357 Cold shock protein domain AKO66_02365 SM00382 ATPases associated with a variety of cellular activities AKO66_02365 SM00959 Rho termination factor, N-terminal domain AKO66_02380 SM00919 Malic enzyme, NAD binding domain AKO66_02380 SM01274 AKO66_02380 AKO66_02395 SM00937 AKO66_02395 AKO66_02430 SM00226 Low molecular weight phosphatase family AKO66_02490 SM00382 ATPases associated with a variety of cellular activities AKO66_02525 SM00327 von Willebrand factor (vWF) type A domain AKO66_02530 SM00327 von Willebrand factor (vWF) type A domain AKO66_02550 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_02560 SM00833 Cobalamin synthesis protein cobW C-terminal domain AKO66_02585 SM00938 Nitrogen regulatory protein P-II AKO66_02595 SM00382 ATPases associated with a variety of cellular activities AKO66_02605 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_02605 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AKO66_02615 SM00014 Acid phosphatase homologues AKO66_02625 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_02680 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AKO66_02680 SM00091 PAS domain AKO66_02685 SM00487 DEAD-like helicases superfamily AKO66_02685 SM00490 helicase superfamily c-terminal domain AKO66_02695 SM00984 UDP binding domain AKO66_02710 SM00344 helix_turn_helix ASNC type AKO66_02730 SM00903 Flavin reductase like domain AKO66_02745 SM00382 ATPases associated with a variety of cellular activities AKO66_02760 SM00354 helix_turn _helix lactose operon repressor AKO66_02790 SM00854 Bacterial capsule synthesis protein PGA_cap AKO66_02845 SM00354 helix_turn _helix lactose operon repressor AKO66_02870 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_02870 SM00387 Histidine kinase-like ATPases AKO66_02875 SM00342 helix_turn_helix, arabinose operon control protein AKO66_02875 SM00448 cheY-homologous receiver domain AKO66_02905 SM00047 Lysozyme subfamily 2 AKO66_02905 SM00287 Bacterial SH3 domain homologues AKO66_02970 SM00382 ATPases associated with a variety of cellular activities AKO66_03000 SM00646 AKO66_03000 AKO66_03005 SM00646 AKO66_03005 AKO66_03030 SM00984 UDP binding domain AKO66_03075 SM00387 Histidine kinase-like ATPases AKO66_03080 SM00421 helix_turn_helix, Lux Regulon AKO66_03080 SM00448 cheY-homologous receiver domain AKO66_03090 SM00487 DEAD-like helicases superfamily AKO66_03090 SM00490 helicase superfamily c-terminal domain AKO66_03170 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_03170 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_03180 SM00957 SecA DEAD-like domain AKO66_03180 SM00958 SecA preprotein cross-linking domain AKO66_03185 SM00937 AKO66_03185 AKO66_03210 SM00382 ATPases associated with a variety of cellular activities AKO66_03230 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_03230 SM00245 tail specific protease AKO66_03240 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_03270 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_03270 SM00387 Histidine kinase-like ATPases AKO66_03270 SM00388 His Kinase A (phosphoacceptor) domain AKO66_03275 SM00448 cheY-homologous receiver domain AKO66_03275 SM00862 Transcriptional regulatory protein, C terminal AKO66_03310 SM00487 DEAD-like helicases superfamily AKO66_03310 SM00490 helicase superfamily c-terminal domain AKO66_03315 SM00382 ATPases associated with a variety of cellular activities AKO66_03350 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_03350 SM00866 AKO66_03350 AKO66_03450 SM00028 Tetratricopeptide repeats AKO66_03505 SM00947 Carbonic anhydrase AKO66_03545 SM00530 Helix-turn-helix XRE-family like proteins AKO66_03550 SM00530 Helix-turn-helix XRE-family like proteins AKO66_03565 SM00382 ATPases associated with a variety of cellular activities AKO66_03645 SM00507 HNH nucleases AKO66_03730 SM00047 Lysozyme subfamily 2 AKO66_03735 SM00710 Parallel beta-helix repeats AKO66_03760 SM00646 AKO66_03760 AKO66_03810 SM00382 ATPases associated with a variety of cellular activities AKO66_03815 SM00382 ATPases associated with a variety of cellular activities AKO66_03820 SM00382 ATPases associated with a variety of cellular activities AKO66_03850 SM00530 Helix-turn-helix XRE-family like proteins AKO66_03935 SM00382 ATPases associated with a variety of cellular activities AKO66_03940 SM00382 ATPases associated with a variety of cellular activities AKO66_03960 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_03960 SM00895 AKO66_03960 AKO66_03965 SM00382 ATPases associated with a variety of cellular activities AKO66_03985 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKO66_04005 SM01192 AKO66_04005 AKO66_04005 SM01193 AKO66_04005 AKO66_04015 SM00382 ATPases associated with a variety of cellular activities AKO66_04055 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_04055 SM00382 ATPases associated with a variety of cellular activities AKO66_04080 SM00530 Helix-turn-helix XRE-family like proteins AKO66_04085 SM00530 Helix-turn-helix XRE-family like proteins AKO66_04090 SM00530 Helix-turn-helix XRE-family like proteins AKO66_04095 SM00966 SpoVT / AbrB like domain AKO66_04110 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_04110 SM00357 Cold shock protein domain AKO66_04110 SM00955 AKO66_04110 AKO66_04135 SM00267 diguanylate cyclase AKO66_04170 SM00387 Histidine kinase-like ATPases AKO66_04175 SM00448 cheY-homologous receiver domain AKO66_04200 SM00382 ATPases associated with a variety of cellular activities AKO66_04260 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_04295 SM00382 ATPases associated with a variety of cellular activities AKO66_04300 SM00448 cheY-homologous receiver domain AKO66_04300 SM00862 Transcriptional regulatory protein, C terminal AKO66_04305 SM00387 Histidine kinase-like ATPases AKO66_04305 SM00388 His Kinase A (phosphoacceptor) domain AKO66_04315 SM00354 helix_turn _helix lactose operon repressor AKO66_04325 SM00858 AKO66_04325 AKO66_04330 SM00710 Parallel beta-helix repeats AKO66_04345 SM00382 ATPases associated with a variety of cellular activities AKO66_04350 SM01130 AKO66_04350 AKO66_04415 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_04415 SM00387 Histidine kinase-like ATPases AKO66_04420 SM00421 helix_turn_helix, Lux Regulon AKO66_04420 SM00448 cheY-homologous receiver domain AKO66_04455 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_04455 SM00387 Histidine kinase-like ATPases AKO66_04455 SM00388 His Kinase A (phosphoacceptor) domain AKO66_04460 SM00448 cheY-homologous receiver domain AKO66_04460 SM00862 Transcriptional regulatory protein, C terminal AKO66_04465 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_04480 SM00382 ATPases associated with a variety of cellular activities AKO66_04530 SM00493 AKO66_04530 AKO66_04545 SM00382 ATPases associated with a variety of cellular activities AKO66_04545 SM00930 AKO66_04545 AKO66_04565 SM00382 ATPases associated with a variety of cellular activities AKO66_04630 SM00448 cheY-homologous receiver domain AKO66_04630 SM00862 Transcriptional regulatory protein, C terminal AKO66_04635 SM00388 His Kinase A (phosphoacceptor) domain AKO66_04700 SM00835 Cupin AKO66_04745 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_04890 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AKO66_04890 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AKO66_04935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_04985 SM00052 Putative diguanylate phosphodiesterase AKO66_05010 SM00387 Histidine kinase-like ATPases AKO66_05015 SM00421 helix_turn_helix, Lux Regulon AKO66_05015 SM00448 cheY-homologous receiver domain AKO66_05080 SM00382 ATPases associated with a variety of cellular activities AKO66_05090 SM00448 cheY-homologous receiver domain AKO66_05095 SM00387 Histidine kinase-like ATPases AKO66_05120 SM00479 AKO66_05120 AKO66_05125 SM01298 AKO66_05125 AKO66_05130 SM00387 Histidine kinase-like ATPases AKO66_05130 SM00388 His Kinase A (phosphoacceptor) domain AKO66_05150 SM00344 helix_turn_helix ASNC type AKO66_05160 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_05210 SM01091 Transporter associated domain AKO66_05235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_05235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_05235 SM00319 Homologues of the ligand binding domain of Tar AKO66_05240 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_05240 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_05240 SM00319 Homologues of the ligand binding domain of Tar AKO66_05245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_05245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_05250 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_05250 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_05250 SM00319 Homologues of the ligand binding domain of Tar AKO66_05285 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_05285 SM00876 Biotin and Thiamin Synthesis associated domain AKO66_05295 SM00530 Helix-turn-helix XRE-family like proteins AKO66_05300 SM00530 Helix-turn-helix XRE-family like proteins AKO66_05320 SM00421 helix_turn_helix, Lux Regulon AKO66_05395 SM00257 Lysin motif AKO66_05475 SM00644 AKO66_05475 AKO66_05515 SM00244 prohibitin homologues AKO66_05530 SM00530 Helix-turn-helix XRE-family like proteins AKO66_05715 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AKO66_05745 SM00947 Carbonic anhydrase AKO66_05750 SM01234 AKO66_05750 AKO66_05810 SM00382 ATPases associated with a variety of cellular activities AKO66_05825 SM00563 Phosphate acyltransferases AKO66_05890 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_05910 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_05915 SM00382 ATPases associated with a variety of cellular activities AKO66_05925 SM00382 ATPases associated with a variety of cellular activities AKO66_05940 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AKO66_05940 SM00091 PAS domain AKO66_05990 SM00342 helix_turn_helix, arabinose operon control protein AKO66_06020 SM00450 Rhodanese Homology Domain AKO66_06055 SM00363 S4 RNA-binding domain AKO66_06060 SM00420 helix_turn_helix, Deoxyribose operon repressor AKO66_06095 SM00046 Diacylglycerol kinase catalytic domain (presumed) AKO66_06115 SM00849 Metallo-beta-lactamase superfamily AKO66_06120 SM00919 Malic enzyme, NAD binding domain AKO66_06120 SM01274 AKO66_06120 AKO66_06160 SM00382 ATPases associated with a variety of cellular activities AKO66_06160 SM00843 AKO66_06160 AKO66_06185 SM00830 Chorismate mutase type II AKO66_06190 SM00354 helix_turn _helix lactose operon repressor AKO66_06200 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_06215 SM00363 S4 RNA-binding domain AKO66_06245 SM00363 S4 RNA-binding domain AKO66_06245 SM01390 AKO66_06245 AKO66_06250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AKO66_06285 SM00981 AKO66_06285 AKO66_06310 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_06330 SM00382 ATPases associated with a variety of cellular activities AKO66_06345 SM00387 Histidine kinase-like ATPases AKO66_06350 SM00448 cheY-homologous receiver domain AKO66_06350 SM00862 Transcriptional regulatory protein, C terminal AKO66_06360 SM00421 helix_turn_helix, Lux Regulon AKO66_06360 SM00448 cheY-homologous receiver domain AKO66_06375 SM00487 DEAD-like helicases superfamily AKO66_06375 SM00490 helicase superfamily c-terminal domain AKO66_06420 SM00852 Probable molybdopterin binding domain AKO66_06445 SM00849 Metallo-beta-lactamase superfamily AKO66_06450 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_06480 SM00481 DNA polymerase alpha chain like domain AKO66_06485 SM00919 Malic enzyme, NAD binding domain AKO66_06485 SM01274 AKO66_06485 AKO66_06530 SM01329 AKO66_06530 AKO66_06540 SM00448 cheY-homologous receiver domain AKO66_06540 SM00862 Transcriptional regulatory protein, C terminal AKO66_06545 SM00387 Histidine kinase-like ATPases AKO66_06545 SM00388 His Kinase A (phosphoacceptor) domain AKO66_06550 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AKO66_06550 SM00474 3'-5' exonuclease AKO66_06550 SM00475 5'-3' exonuclease AKO66_06550 SM00482 DNA polymerase A domain AKO66_06555 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AKO66_06555 SM01232 AKO66_06555 AKO66_06570 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AKO66_06595 SM00382 ATPases associated with a variety of cellular activities AKO66_06610 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AKO66_06615 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AKO66_06615 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_06670 SM00967 RNA 2'-O ribose methyltransferase substrate binding AKO66_06680 SM00873 B3/4 domain AKO66_06680 SM00874 tRNA synthetase B5 domain AKO66_06680 SM00896 Ferredoxin-fold anticodon binding domain AKO66_06700 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AKO66_06700 SM00481 DNA polymerase alpha chain like domain AKO66_06700 SM00483 DNA polymerase X family AKO66_06705 SM00463 Small MutS-related domain AKO66_06705 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AKO66_06705 SM00534 ATPase domain of DNA mismatch repair MUTS family AKO66_06735 SM00893 Electron transfer flavoprotein domain AKO66_06740 SM00893 Electron transfer flavoprotein domain AKO66_06745 SM00813 Alpha-L-arabinofuranosidase C-terminus AKO66_06755 SM00465 GIY-YIG type nucleases (URI domain) AKO66_06810 SM00421 helix_turn_helix, Lux Regulon AKO66_06815 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_06825 SM00909 Sporulation and spore germination AKO66_06870 SM00612 AKO66_06870 AKO66_06930 SM00917 LeuA allosteric (dimerisation) domain AKO66_06935 SM01329 AKO66_06935 AKO66_06960 SM00382 ATPases associated with a variety of cellular activities AKO66_06960 SM00994 ClpX C4-type zinc finger AKO66_06960 SM01086 C-terminal, D2-small domain, of ClpB protein AKO66_06965 SM00382 ATPases associated with a variety of cellular activities AKO66_06970 SM00382 ATPases associated with a variety of cellular activities AKO66_06970 SM00464 Found in ATP-dependent protease La (LON) AKO66_07015 SM01004 Delta-aminolevulinic acid dehydratase AKO66_07025 SM00257 Lysin motif AKO66_07120 SM01317 AKO66_07120 AKO66_07165 SM00257 Lysin motif AKO66_07200 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AKO66_07205 SM00382 ATPases associated with a variety of cellular activities AKO66_07225 SM01323 AKO66_07225 AKO66_07275 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_07275 SM00954 Region found in RelA / SpoT proteins AKO66_07285 SM00287 Bacterial SH3 domain homologues AKO66_07285 SM00646 AKO66_07285 AKO66_07305 SM00382 ATPases associated with a variety of cellular activities AKO66_07325 SM00028 Tetratricopeptide repeats AKO66_07355 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_07355 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AKO66_07360 SM00382 ATPases associated with a variety of cellular activities AKO66_07370 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AKO66_07380 SM00732 Likely ribonuclease with RNase H fold. AKO66_07515 SM00829 Enoylreductase AKO66_07530 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_07535 SM00382 ATPases associated with a variety of cellular activities AKO66_07580 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AKO66_07595 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_07605 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_07615 SM01007 Class II Aldolase and Adducin N-terminal domain AKO66_07645 SM00382 ATPases associated with a variety of cellular activities AKO66_07710 SM00028 Tetratricopeptide repeats AKO66_07745 SM01103 AKO66_07745 AKO66_07755 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_07775 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AKO66_07785 SM00849 Metallo-beta-lactamase superfamily AKO66_07815 SM00838 Elongation factor G C-terminus AKO66_07820 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_07840 SM00271 DnaJ molecular chaperone homology domain AKO66_07855 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_07905 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_07945 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_07960 SM00400 zinc finger AKO66_07960 SM00493 AKO66_07960 AKO66_07995 SM00487 DEAD-like helicases superfamily AKO66_07995 SM00490 helicase superfamily c-terminal domain AKO66_08000 SM00518 AP endonuclease family 2 AKO66_08015 SM00382 ATPases associated with a variety of cellular activities AKO66_08100 SM00382 ATPases associated with a variety of cellular activities AKO66_08105 SM00382 ATPases associated with a variety of cellular activities AKO66_08140 SM00028 Tetratricopeptide repeats AKO66_08160 SM00631 AKO66_08160 AKO66_08175 SM00849 Metallo-beta-lactamase superfamily AKO66_08200 SM00382 ATPases associated with a variety of cellular activities AKO66_08260 SM00530 Helix-turn-helix XRE-family like proteins AKO66_08270 SM00487 DEAD-like helicases superfamily AKO66_08270 SM00490 helicase superfamily c-terminal domain AKO66_08290 SM00450 Rhodanese Homology Domain AKO66_08300 SM00529 Helix-turn-helix diphteria tox regulatory element AKO66_08335 SM00841 Elongation factor P, C-terminal AKO66_08335 SM01185 AKO66_08335 AKO66_08345 SM00382 ATPases associated with a variety of cellular activities AKO66_08390 SM00878 Biotin carboxylase C-terminal domain AKO66_08425 SM00861 Transketolase, pyrimidine binding domain AKO66_08430 SM00363 S4 RNA-binding domain AKO66_08445 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_08450 SM00448 cheY-homologous receiver domain AKO66_08470 SM00091 PAS domain AKO66_08470 SM00382 ATPases associated with a variety of cellular activities AKO66_08480 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKO66_08500 SM00861 Transketolase, pyrimidine binding domain AKO66_08515 SM00046 Diacylglycerol kinase catalytic domain (presumed) AKO66_08525 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_08525 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AKO66_08535 SM00382 ATPases associated with a variety of cellular activities AKO66_08565 SM00260 Two component signalling adaptor domain AKO66_08585 SM01350 AKO66_08585 AKO66_08625 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_08625 SM00866 AKO66_08625 AKO66_08670 SM00849 Metallo-beta-lactamase superfamily AKO66_08740 SM00028 Tetratricopeptide repeats AKO66_08820 SM00936 Penicillin-binding protein 5, C-terminal domain AKO66_08830 SM00387 Histidine kinase-like ATPases AKO66_08965 SM00363 S4 RNA-binding domain AKO66_08985 SM00448 cheY-homologous receiver domain AKO66_08985 SM00862 Transcriptional regulatory protein, C terminal AKO66_08990 SM00091 PAS domain AKO66_08990 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_08990 SM00387 Histidine kinase-like ATPases AKO66_08990 SM00388 His Kinase A (phosphoacceptor) domain AKO66_09005 SM00257 Lysin motif AKO66_09030 SM00487 DEAD-like helicases superfamily AKO66_09030 SM00490 helicase superfamily c-terminal domain AKO66_09040 SM00257 Lysin motif AKO66_09060 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AKO66_09100 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_09105 SM01240 AKO66_09105 AKO66_09150 SM00411 bacterial (prokaryotic) histone like domain AKO66_09180 SM00562 AKO66_09180 AKO66_09185 SM00138 Methyltransferase, chemotaxis proteins AKO66_09250 SM00028 Tetratricopeptide repeats AKO66_09255 SM00914 AKO66_09255 AKO66_09305 SM00851 MGS-like domain AKO66_09345 SM00479 AKO66_09345 AKO66_09345 SM00491 AKO66_09345 AKO66_09365 SM00478 endonuclease III AKO66_09365 SM00525 AKO66_09365 AKO66_09430 SM00857 Resolvase, N terminal domain AKO66_09440 SM00530 Helix-turn-helix XRE-family like proteins AKO66_09470 SM00482 DNA polymerase A domain AKO66_09495 SM00990 AKO66_09495 AKO66_09500 SM00487 DEAD-like helicases superfamily AKO66_09515 SM00507 HNH nucleases AKO66_09610 SM00047 Lysozyme subfamily 2 AKO66_09615 SM00710 Parallel beta-helix repeats AKO66_09640 SM00646 AKO66_09640 AKO66_09660 SM00028 Tetratricopeptide repeats AKO66_09695 SM00981 AKO66_09695 AKO66_09705 SM00491 AKO66_09705 AKO66_09755 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AKO66_09755 SM00475 5'-3' exonuclease AKO66_09790 SM00357 Cold shock protein domain AKO66_09820 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_09825 SM00567 E-Z type HEAT repeats AKO66_09825 SM00932 Scaffold protein Nfu/NifU N terminal AKO66_09925 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_09970 SM00091 PAS domain AKO66_09970 SM00382 ATPases associated with a variety of cellular activities AKO66_09995 SM00014 Acid phosphatase homologues AKO66_10025 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_10025 SM00245 tail specific protease AKO66_10090 SM00257 Lysin motif AKO66_10100 SM00382 ATPases associated with a variety of cellular activities AKO66_10105 SM00327 von Willebrand factor (vWF) type A domain AKO66_10110 SM00861 Transketolase, pyrimidine binding domain AKO66_10165 SM00341 Helicase and RNase D C-terminal AKO66_10165 SM00487 DEAD-like helicases superfamily AKO66_10165 SM00490 helicase superfamily c-terminal domain AKO66_10165 SM00956 AKO66_10165 AKO66_10170 SM00257 Lysin motif AKO66_10210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AKO66_10225 SM00871 Bacterial transcription activator, effector binding domain AKO66_10230 SM00849 Metallo-beta-lactamase superfamily AKO66_10295 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AKO66_10310 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AKO66_10325 SM00422 helix_turn_helix, mercury resistance AKO66_10330 SM00382 ATPases associated with a variety of cellular activities AKO66_10335 SM00382 ATPases associated with a variety of cellular activities AKO66_10365 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AKO66_10495 SM00420 helix_turn_helix, Deoxyribose operon repressor AKO66_10495 SM01134 AKO66_10495 AKO66_10520 SM00878 Biotin carboxylase C-terminal domain AKO66_10570 SM00100 Cyclic nucleotide-monophosphate binding domain AKO66_10580 SM00155 Phospholipase D. Active site motifs. AKO66_10615 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_10695 SM00354 helix_turn _helix lactose operon repressor AKO66_10725 SM00606 Cellulose Binding Domain Type IV AKO66_10735 SM00448 cheY-homologous receiver domain AKO66_10735 SM00862 Transcriptional regulatory protein, C terminal AKO66_10740 SM00387 Histidine kinase-like ATPases AKO66_10740 SM00388 His Kinase A (phosphoacceptor) domain AKO66_10750 SM01061 CAT RNA binding domain AKO66_10765 SM00422 helix_turn_helix, mercury resistance AKO66_10820 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AKO66_10830 SM00226 Low molecular weight phosphatase family AKO66_10835 SM01266 AKO66_10835 AKO66_10840 SM01329 AKO66_10840 AKO66_10855 SM00434 DNA Topoisomerase IV AKO66_10860 SM00387 Histidine kinase-like ATPases AKO66_10860 SM00433 TopoisomeraseII AKO66_10865 SM00881 CoA binding domain AKO66_10870 SM01207 AKO66_10870 AKO66_10955 SM00861 Transketolase, pyrimidine binding domain AKO66_10965 SM00857 Resolvase, N terminal domain AKO66_10970 SM00257 Lysin motif AKO66_11005 SM00020 Trypsin-like serine protease AKO66_11080 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen AKO66_11140 SM00506 Appr-1"-p processing enzyme AKO66_11165 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_11170 SM00829 Enoylreductase AKO66_11190 SM00860 SMI1 / KNR4 family AKO66_11220 SM01230 AKO66_11220 AKO66_11225 SM00422 helix_turn_helix, mercury resistance AKO66_11240 SM00382 ATPases associated with a variety of cellular activities AKO66_11245 SM00646 AKO66_11245 AKO66_11330 SM00028 Tetratricopeptide repeats AKO66_11340 SM01058 CarD-like/TRCF domain AKO66_11360 SM00853 MutL C terminal dimerisation domain AKO66_11360 SM01340 AKO66_11360 AKO66_11365 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AKO66_11365 SM00534 ATPase domain of DNA mismatch repair MUTS family AKO66_11380 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_11395 SM00829 Enoylreductase AKO66_11415 SM00322 K homology RNA-binding domain AKO66_11415 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_11420 SM00382 ATPases associated with a variety of cellular activities AKO66_11425 SM00852 Probable molybdopterin binding domain AKO66_11460 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_11485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_11485 SM00866 AKO66_11485 AKO66_11490 SM00382 ATPases associated with a variety of cellular activities AKO66_11490 SM00843 AKO66_11490 AKO66_11505 SM00849 Metallo-beta-lactamase superfamily AKO66_11510 SM01130 AKO66_11510 AKO66_11520 SM00859 Semialdehyde dehydrogenase, NAD binding domain AKO66_11590 SM00481 DNA polymerase alpha chain like domain AKO66_11640 SM01118 AKO66_11640 AKO66_11655 SM00382 ATPases associated with a variety of cellular activities AKO66_11660 SM00382 ATPases associated with a variety of cellular activities AKO66_11685 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_11685 SM00322 K homology RNA-binding domain AKO66_11690 SM01387 AKO66_11690 AKO66_11695 SM00904 Riboflavin kinase AKO66_11730 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_11730 SM00322 K homology RNA-binding domain AKO66_11745 SM00633 Glycosyl hydrolase family 10 AKO66_11755 SM01067 Cellulose binding domain AKO66_11760 SM00479 AKO66_11760 AKO66_11760 SM00481 DNA polymerase alpha chain like domain AKO66_11770 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_11830 SM00260 Two component signalling adaptor domain AKO66_11835 SM00073 Histidine Phosphotransfer domain AKO66_11835 SM00260 Two component signalling adaptor domain AKO66_11835 SM00387 Histidine kinase-like ATPases AKO66_11835 SM01231 AKO66_11835 AKO66_11840 SM00448 cheY-homologous receiver domain AKO66_11850 SM00962 SRP54-type protein, GTPase domain AKO66_11885 SM00448 cheY-homologous receiver domain AKO66_11935 SM00382 ATPases associated with a variety of cellular activities AKO66_11975 SM00382 ATPases associated with a variety of cellular activities AKO66_11975 SM01086 C-terminal, D2-small domain, of ClpB protein AKO66_11995 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AKO66_11995 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AKO66_11995 SM00493 AKO66_11995 AKO66_12005 SM00881 CoA binding domain AKO66_12065 SM00382 ATPases associated with a variety of cellular activities AKO66_12065 SM00962 SRP54-type protein, GTPase domain AKO66_12065 SM00963 SRP54-type protein, helical bundle domain AKO66_12075 SM00382 ATPases associated with a variety of cellular activities AKO66_12075 SM00962 SRP54-type protein, GTPase domain AKO66_12075 SM00963 SRP54-type protein, helical bundle domain AKO66_12080 SM00968 SMC proteins Flexible Hinge Domain AKO66_12085 SM00358 Double-stranded RNA binding motif AKO66_12085 SM00535 Ribonuclease III family AKO66_12095 SM00822 AKO66_12095 AKO66_12100 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AKO66_12115 SM00487 DEAD-like helicases superfamily AKO66_12115 SM00490 helicase superfamily c-terminal domain AKO66_12130 SM01120 AKO66_12130 AKO66_12130 SM01121 AKO66_12130 AKO66_12150 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain AKO66_12165 SM00220 Serine/Threonine protein kinases, catalytic domain AKO66_12165 SM00740 AKO66_12165 AKO66_12170 SM00331 Sigma factor PP2C-like phosphatases AKO66_12170 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AKO66_12195 SM00487 DEAD-like helicases superfamily AKO66_12195 SM00490 helicase superfamily c-terminal domain AKO66_12205 SM01409 AKO66_12205 AKO66_12210 SM00072 Guanylate kinase homologues. AKO66_12225 SM00831 Cation transporter/ATPase, N-terminus AKO66_12275 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AKO66_12290 SM00851 MGS-like domain AKO66_12290 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKO66_12290 SM01209 AKO66_12290 AKO66_12295 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AKO66_12320 SM00363 S4 RNA-binding domain AKO66_12345 SM00363 S4 RNA-binding domain AKO66_12375 SM00382 ATPases associated with a variety of cellular activities AKO66_12400 SM00858 AKO66_12400 AKO66_12430 SM00864 Tubulin/FtsZ family, GTPase domain AKO66_12430 SM00865 Tubulin/FtsZ family, C-terminal domain AKO66_12435 SM00842 Cell division protein FtsA AKO66_12490 SM00740 AKO66_12490 AKO66_12495 SM00740 AKO66_12495 AKO66_12530 SM00717 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AKO66_12605 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_12655 SM00878 Biotin carboxylase C-terminal domain AKO66_12680 SM00670 Large family of predicted nucleotide-binding domains AKO66_12700 SM00838 Elongation factor G C-terminus AKO66_12770 SM00861 Transketolase, pyrimidine binding domain AKO66_12805 SM00849 Metallo-beta-lactamase superfamily AKO66_12825 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AKO66_12825 SM00091 PAS domain AKO66_12825 SM00387 Histidine kinase-like ATPases AKO66_12825 SM00388 His Kinase A (phosphoacceptor) domain AKO66_12830 SM00966 SpoVT / AbrB like domain AKO66_12850 SM00382 ATPases associated with a variety of cellular activities AKO66_12875 SM00420 helix_turn_helix, Deoxyribose operon repressor AKO66_12875 SM01134 AKO66_12875 AKO66_12885 SM00382 ATPases associated with a variety of cellular activities AKO66_12920 SM00852 Probable molybdopterin binding domain AKO66_13025 SM00052 Putative diguanylate phosphodiesterase AKO66_13040 SM00257 Lysin motif AKO66_13065 SM00260 Two component signalling adaptor domain AKO66_13065 SM00448 cheY-homologous receiver domain AKO66_13090 SM00091 PAS domain AKO66_13090 SM00387 Histidine kinase-like ATPases AKO66_13090 SM00388 His Kinase A (phosphoacceptor) domain AKO66_13115 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_13115 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_13145 SM01061 CAT RNA binding domain AKO66_13150 SM00354 helix_turn _helix lactose operon repressor AKO66_13220 SM00382 ATPases associated with a variety of cellular activities AKO66_13220 SM01086 C-terminal, D2-small domain, of ClpB protein AKO66_13235 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_13240 SM00387 Histidine kinase-like ATPases AKO66_13240 SM00388 His Kinase A (phosphoacceptor) domain AKO66_13255 SM01007 Class II Aldolase and Adducin N-terminal domain AKO66_13290 SM00091 PAS domain AKO66_13290 SM00387 Histidine kinase-like ATPases AKO66_13290 SM00388 His Kinase A (phosphoacceptor) domain AKO66_13350 SM00052 Putative diguanylate phosphodiesterase AKO66_13350 SM00267 diguanylate cyclase AKO66_13355 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_13365 SM00422 helix_turn_helix, mercury resistance AKO66_13385 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_13385 SM00924 MgtE intracellular N domain AKO66_13405 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_13405 SM00387 Histidine kinase-like ATPases AKO66_13405 SM00388 His Kinase A (phosphoacceptor) domain AKO66_13410 SM00448 cheY-homologous receiver domain AKO66_13410 SM00862 Transcriptional regulatory protein, C terminal AKO66_13415 SM00530 Helix-turn-helix XRE-family like proteins AKO66_13445 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_13460 SM00028 Tetratricopeptide repeats AKO66_13470 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AKO66_13495 SM00342 helix_turn_helix, arabinose operon control protein AKO66_13530 SM00382 ATPases associated with a variety of cellular activities AKO66_13540 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AKO66_13555 SM00382 ATPases associated with a variety of cellular activities AKO66_13580 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AKO66_13620 SM01059 Chloramphenicol acetyltransferase AKO66_13625 SM00861 Transketolase, pyrimidine binding domain AKO66_13635 SM00829 Enoylreductase AKO66_13685 SM01022 AKO66_13685 AKO66_13710 SM00257 Lysin motif AKO66_13710 SM00644 AKO66_13710 AKO66_13735 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_13765 SM00612 AKO66_13765 AKO66_13775 SM00829 Enoylreductase AKO66_13780 SM01005 Alanine racemase, C-terminal domain AKO66_13795 SM00871 Bacterial transcription activator, effector binding domain AKO66_13855 SM00860 SMI1 / KNR4 family AKO66_13865 SM00028 Tetratricopeptide repeats AKO66_13870 SM01059 Chloramphenicol acetyltransferase AKO66_13885 SM00028 Tetratricopeptide repeats AKO66_13900 SM01130 AKO66_13900 AKO66_13920 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_13930 SM01004 Delta-aminolevulinic acid dehydratase AKO66_13965 SM00860 SMI1 / KNR4 family AKO66_14205 SM00954 Region found in RelA / SpoT proteins AKO66_14215 SM01118 AKO66_14215 AKO66_14245 SM00155 Phospholipase D. Active site motifs. AKO66_14275 SM00382 ATPases associated with a variety of cellular activities AKO66_14280 SM00382 ATPases associated with a variety of cellular activities AKO66_14325 SM00382 ATPases associated with a variety of cellular activities AKO66_14330 SM00382 ATPases associated with a variety of cellular activities AKO66_14340 SM00825 Beta-ketoacyl synthase AKO66_14395 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AKO66_14400 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AKO66_14420 SM00859 Semialdehyde dehydrogenase, NAD binding domain AKO66_14475 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_14475 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_14485 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_14500 SM01018 B12 binding domain AKO66_14525 SM01006 Siderophore biosynthesis protein domain AKO66_14560 SM00342 helix_turn_helix, arabinose operon control protein AKO66_14735 SM00382 ATPases associated with a variety of cellular activities AKO66_14760 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_14770 SM01119 AKO66_14770 AKO66_14780 SM00914 AKO66_14780 AKO66_14795 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_14800 SM00855 Phosphoglycerate mutase family AKO66_14830 SM00849 Metallo-beta-lactamase superfamily AKO66_14900 SM00382 ATPases associated with a variety of cellular activities AKO66_14930 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_14960 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AKO66_15005 SM00729 Elongator protein 3, MiaB family, Radical SAM AKO66_15045 SM00382 ATPases associated with a variety of cellular activities AKO66_15060 SM00382 ATPases associated with a variety of cellular activities AKO66_15065 SM00382 ATPases associated with a variety of cellular activities AKO66_15115 SM01091 Transporter associated domain AKO66_15120 SM00422 helix_turn_helix, mercury resistance AKO66_15125 SM01091 Transporter associated domain AKO66_15130 SM00563 Phosphate acyltransferases AKO66_15155 SM00257 Lysin motif AKO66_15160 SM00098 Alkaline phosphatase homologues AKO66_15180 SM01060 AKO66_15180 AKO66_15195 SM00421 helix_turn_helix, Lux Regulon AKO66_15195 SM00448 cheY-homologous receiver domain AKO66_15200 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AKO66_15280 SM00318 Staphylococcal nuclease homologues AKO66_15285 SM00138 Methyltransferase, chemotaxis proteins AKO66_15285 SM00387 Histidine kinase-like ATPases AKO66_15285 SM00388 His Kinase A (phosphoacceptor) domain AKO66_15315 SM00267 diguanylate cyclase AKO66_15320 SM00357 Cold shock protein domain AKO66_15350 SM00763 PrkA AAA domain AKO66_15365 SM00567 E-Z type HEAT repeats AKO66_15400 SM00382 ATPases associated with a variety of cellular activities AKO66_15420 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_15425 SM00382 ATPases associated with a variety of cellular activities AKO66_15470 SM00855 Phosphoglycerate mutase family AKO66_15635 SM00382 ATPases associated with a variety of cellular activities AKO66_15640 SM00382 ATPases associated with a variety of cellular activities AKO66_15645 SM00382 ATPases associated with a variety of cellular activities AKO66_15675 SM00478 endonuclease III AKO66_15695 SM00835 Cupin AKO66_15760 SM00530 Helix-turn-helix XRE-family like proteins AKO66_15780 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_15795 SM00829 Enoylreductase AKO66_15820 SM00382 ATPases associated with a variety of cellular activities AKO66_15830 SM00342 helix_turn_helix, arabinose operon control protein AKO66_15925 SM00422 helix_turn_helix, mercury resistance AKO66_15925 SM00871 Bacterial transcription activator, effector binding domain AKO66_15960 SM00478 endonuclease III AKO66_16040 SM00226 Low molecular weight phosphatase family AKO66_16070 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_16070 SM00866 AKO66_16070 AKO66_16075 SM00642 Alpha-amylase domain AKO66_16090 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_16090 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_16160 SM00631 AKO66_16160 AKO66_16175 SM00448 cheY-homologous receiver domain AKO66_16180 SM00387 Histidine kinase-like ATPases AKO66_16195 SM00320 WD40 repeats AKO66_16225 SM00829 Enoylreductase AKO66_16230 SM00487 DEAD-like helicases superfamily AKO66_16230 SM00490 helicase superfamily c-terminal domain AKO66_16235 SM00382 ATPases associated with a variety of cellular activities AKO66_16245 SM00422 helix_turn_helix, mercury resistance AKO66_16255 SM00382 ATPases associated with a variety of cellular activities AKO66_16395 SM00860 SMI1 / KNR4 family AKO66_16420 SM00046 Diacylglycerol kinase catalytic domain (presumed) AKO66_16440 SM00845 GatB domain AKO66_16475 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AKO66_16475 SM00292 breast cancer carboxy-terminal domain AKO66_16475 SM00532 Ligase N family AKO66_16530 SM00882 Coenzyme A transferase AKO66_16535 SM00882 Coenzyme A transferase AKO66_16560 SM01209 AKO66_16560 AKO66_16560 SM01210 AKO66_16560 AKO66_16565 SM00798 AICARFT/IMPCHase bienzyme AKO66_16565 SM00851 MGS-like domain AKO66_16590 SM01211 AKO66_16590 AKO66_16605 SM00998 Adenylosuccinate lyase C-terminus AKO66_16615 SM01001 AIR carboxylase AKO66_16680 SM00850 LytTr DNA-binding domain AKO66_16705 SM00342 helix_turn_helix, arabinose operon control protein AKO66_16705 SM00871 Bacterial transcription activator, effector binding domain AKO66_16710 SM00917 LeuA allosteric (dimerisation) domain AKO66_16715 SM00342 helix_turn_helix, arabinose operon control protein AKO66_16735 SM00460 Transglutaminase/protease-like homologues AKO66_16800 SM00287 Bacterial SH3 domain homologues AKO66_16810 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_16840 SM00883 Chaperonin 10 Kd subunit AKO66_16870 SM00881 CoA binding domain AKO66_16880 SM00382 ATPases associated with a variety of cellular activities AKO66_17000 SM00530 Helix-turn-helix XRE-family like proteins AKO66_17020 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_17065 SM00850 LytTr DNA-binding domain AKO66_17090 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_17100 SM00870 AKO66_17100 AKO66_17140 SM00422 helix_turn_helix, mercury resistance AKO66_17145 SM00829 Enoylreductase AKO66_17150 SM01058 CarD-like/TRCF domain AKO66_17155 SM00357 Cold shock protein domain AKO66_17210 SM00731 SprT homologues. AKO66_17215 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_17215 SM00732 Likely ribonuclease with RNase H fold. AKO66_17220 SM00331 Sigma factor PP2C-like phosphatases AKO66_17220 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain AKO66_17240 SM00331 Sigma factor PP2C-like phosphatases AKO66_17270 SM01005 Alanine racemase, C-terminal domain AKO66_17300 SM00487 DEAD-like helicases superfamily AKO66_17300 SM00490 helicase superfamily c-terminal domain AKO66_17345 SM00382 ATPases associated with a variety of cellular activities AKO66_17365 SM00448 cheY-homologous receiver domain AKO66_17370 SM00091 PAS domain AKO66_17370 SM00387 Histidine kinase-like ATPases AKO66_17445 SM00267 diguanylate cyclase AKO66_17455 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AKO66_17455 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AKO66_17455 SM00493 AKO66_17455 AKO66_17515 SM00346 helix_turn_helix isocitrate lyase regulation AKO66_17520 SM00797 Allophanate hydrolase subunit 2 AKO66_17525 SM00796 Allophanate hydrolase subunit 1 AKO66_17545 SM00028 Tetratricopeptide repeats AKO66_17565 SM00894 Excalibur calcium-binding domain AKO66_17590 SM00900 AKO66_17590 AKO66_17605 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_17605 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_17605 SM01049 AKO66_17605 AKO66_17655 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_17670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AKO66_17695 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AKO66_17700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_17700 SM00387 Histidine kinase-like ATPases AKO66_17700 SM00388 His Kinase A (phosphoacceptor) domain AKO66_17705 SM00448 cheY-homologous receiver domain AKO66_17705 SM00862 Transcriptional regulatory protein, C terminal AKO66_17730 SM00382 ATPases associated with a variety of cellular activities AKO66_17740 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_17740 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AKO66_17755 SM00710 Parallel beta-helix repeats AKO66_17770 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_17780 SM00382 ATPases associated with a variety of cellular activities AKO66_17795 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_17805 SM00824 Thioesterase AKO66_17810 SM00822 AKO66_17810 AKO66_17815 SM00822 AKO66_17815 AKO66_17815 SM00823 Phosphopantetheine attachment site AKO66_17820 SM00823 Phosphopantetheine attachment site AKO66_17825 SM00823 Phosphopantetheine attachment site AKO66_17830 SM00823 Phosphopantetheine attachment site AKO66_17845 SM00382 ATPases associated with a variety of cellular activities AKO66_17875 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AKO66_17875 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AKO66_17890 SM00344 helix_turn_helix ASNC type AKO66_17905 SM00062 Bacterial periplasmic substrate-binding proteins AKO66_17970 SM00346 helix_turn_helix isocitrate lyase regulation AKO66_18070 SM00354 helix_turn _helix lactose operon repressor AKO66_18115 SM00116 Domain in cystathionine beta-synthase and other proteins. AKO66_18115 SM00382 ATPases associated with a variety of cellular activities AKO66_18205 SM00382 ATPases associated with a variety of cellular activities AKO66_18210 SM00448 cheY-homologous receiver domain AKO66_18210 SM00850 LytTr DNA-binding domain AKO66_18215 SM00387 Histidine kinase-like ATPases AKO66_18235 SM00421 helix_turn_helix, Lux Regulon AKO66_18235 SM00448 cheY-homologous receiver domain AKO66_18250 SM00448 cheY-homologous receiver domain AKO66_18255 SM00387 Histidine kinase-like ATPases AKO66_18290 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_18390 SM00872 Alpha mannosidase, middle domain AKO66_18425 SM01061 CAT RNA binding domain AKO66_18440 SM00450 Rhodanese Homology Domain AKO66_18470 SM00347 helix_turn_helix multiple antibiotic resistance protein AKO66_18490 SM00946 Prolyl-tRNA synthetase, C-terminal AKO66_18505 SM00450 Rhodanese Homology Domain AKO66_18505 SM00849 Metallo-beta-lactamase superfamily AKO66_18510 SM00450 Rhodanese Homology Domain AKO66_18515 SM00450 Rhodanese Homology Domain AKO66_18540 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AKO66_18545 SM00530 Helix-turn-helix XRE-family like proteins AKO66_18550 SM00825 Beta-ketoacyl synthase AKO66_18595 SM00342 helix_turn_helix, arabinose operon control protein AKO66_18610 SM00530 Helix-turn-helix XRE-family like proteins AKO66_18620 SM00382 ATPases associated with a variety of cellular activities AKO66_18625 SM00345 helix_turn_helix gluconate operon transcriptional repressor AKO66_18655 SM00382 ATPases associated with a variety of cellular activities AKO66_18690 SM00382 ATPases associated with a variety of cellular activities AKO66_18700 SM00382 ATPases associated with a variety of cellular activities AKO66_18720 SM00387 Histidine kinase-like ATPases AKO66_18870 SM01251 AKO66_18870 AKO66_18885 SM00646 AKO66_18885 AKO66_18935 SM00382 ATPases associated with a variety of cellular activities AKO66_18940 SM00382 ATPases associated with a variety of cellular activities AKO66_18950 SM00662 RNA polymerases D AKO66_18970 SM00316 Ribosomal protein S1-like RNA-binding domain AKO66_19030 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AKO66_19035 SM01374 AKO66_19035 AKO66_19055 SM00322 K homology RNA-binding domain AKO66_19070 SM01382 AKO66_19070 AKO66_19070 SM01383 AKO66_19070 AKO66_19090 SM01403 AKO66_19090 AKO66_19105 SM00838 Elongation factor G C-terminus AKO66_19105 SM00889 Elongation factor G, domain IV AKO66_19125 SM00663 RNA polymerase I subunit A N-terminus AKO66_19155 SM00649 Ribosomal protein L11/L12 AKO66_19160 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AKO66_19160 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AKO66_19180 SM00967 RNA 2'-O ribose methyltransferase substrate binding AKO66_19185 SM00535 Ribonuclease III family AKO66_19190 SM00840 AKO66_19190 AKO66_19215 SM00670 Large family of predicted nucleotide-binding domains AKO66_19225 SM00382 ATPases associated with a variety of cellular activities AKO66_19230 SM00382 ATPases associated with a variety of cellular activities AKO66_19230 SM01086 C-terminal, D2-small domain, of ClpB protein